##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build PDT001236882.1 #!genome-build-accession NCBI_Assembly:GCA_021877075.1 #!annotation-date 02/02/2022 19:59:17 #!annotation-source NCBI ##sequence-region DAFVNP010000001.1 1 145596 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000001.1 tpg region 1 145596 . + . ID=DAFVNP010000001.1:1..145596;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000001.1 tpg gene 181 2778 . + . ID=gene-L8R42_000001;Name=pglZ;gbkey=Gene;gene=pglZ;gene_biotype=protein_coding;locus_tag=L8R42_000001 DAFVNP010000001.1 Protein Homology CDS 181 2778 . + 0 ID=cds-HBQ7388145.1;Parent=gene-L8R42_000001;Dbxref=NCBI_GP:HBQ7388145.1;Name=HBQ7388145.1;gbkey=CDS;gene=pglZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722530.1;locus_tag=L8R42_000001;product=BREX-1 system phosphatase PglZ type A;protein_id=HBQ7388145.1;transl_table=11 DAFVNP010000001.1 tpg gene 2789 4858 . + . ID=gene-L8R42_000002;Name=brxL;gbkey=Gene;gene=brxL;gene_biotype=protein_coding;locus_tag=L8R42_000002 DAFVNP010000001.1 Protein Homology CDS 2789 4858 . + 0 ID=cds-HBQ7388146.1;Parent=gene-L8R42_000002;Dbxref=NCBI_GP:HBQ7388146.1;Name=HBQ7388146.1;gbkey=CDS;gene=brxL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007890768.1;locus_tag=L8R42_000002;product=protease Lon-related BREX system protein BrxL;protein_id=HBQ7388146.1;transl_table=11 DAFVNP010000001.1 tpg gene 4981 6330 . + . ID=gene-L8R42_000003;Name=L8R42_000003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000003 DAFVNP010000001.1 Protein Homology CDS 4981 6330 . + 0 ID=cds-HBQ7388147.1;Parent=gene-L8R42_000003;Dbxref=NCBI_GP:HBQ7388147.1;Name=HBQ7388147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001759691.1;locus_tag=L8R42_000003;product=phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein;protein_id=HBQ7388147.1;transl_table=11 DAFVNP010000001.1 tpg gene 6391 7380 . - . ID=gene-L8R42_000004;Name=L8R42_000004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000004 DAFVNP010000001.1 Protein Homology CDS 6391 7380 . - 0 ID=cds-HBQ7388148.1;Parent=gene-L8R42_000004;Dbxref=NCBI_GP:HBQ7388148.1;Name=HBQ7388148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463349.1;locus_tag=L8R42_000004;product=restriction endonuclease;protein_id=HBQ7388148.1;transl_table=11 DAFVNP010000001.1 tpg gene 7477 10992 . - . ID=gene-L8R42_000005;Name=L8R42_000005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000005 DAFVNP010000001.1 Protein Homology CDS 7477 10992 . - 0 ID=cds-HBQ7388149.1;Parent=gene-L8R42_000005;Dbxref=NCBI_GP:HBQ7388149.1;Name=HBQ7388149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=L8R42_000005;product=ATP-binding protein;protein_id=HBQ7388149.1;transl_table=11 DAFVNP010000001.1 tpg gene 11171 11638 . - . ID=gene-L8R42_000006;Name=L8R42_000006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000006 DAFVNP010000001.1 Protein Homology CDS 11171 11638 . - 0 ID=cds-HBQ7388150.1;Parent=gene-L8R42_000006;Dbxref=NCBI_GP:HBQ7388150.1;Name=HBQ7388150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219004.1;locus_tag=L8R42_000006;product=DUF4102 domain-containing protein;protein_id=HBQ7388150.1;transl_table=11 DAFVNP010000001.1 tpg gene 11860 11944 . - . ID=gene-L8R42_000007;Name=L8R42_000007;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000007 DAFVNP010000001.1 tRNAscan-SE tRNA 11860 11944 . - . ID=rna-L8R42_000007;Parent=gene-L8R42_000007;anticodon=(pos:complement(11908..11910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000007;product=tRNA-Leu DAFVNP010000001.1 tRNAscan-SE exon 11860 11944 . - . ID=exon-L8R42_000007-1;Parent=rna-L8R42_000007;anticodon=(pos:complement(11908..11910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000007;product=tRNA-Leu DAFVNP010000001.1 tpg gene 12167 13186 . + . ID=gene-L8R42_000008;Name=L8R42_000008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000008 DAFVNP010000001.1 Protein Homology CDS 12167 13186 . + 0 ID=cds-HBQ7388151.1;Parent=gene-L8R42_000008;Dbxref=NCBI_GP:HBQ7388151.1;Name=HBQ7388151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=L8R42_000008;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=HBQ7388151.1;transl_table=11 DAFVNP010000001.1 tpg gene 13214 13744 . - . ID=gene-L8R42_000009;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=L8R42_000009 DAFVNP010000001.1 Protein Homology CDS 13214 13744 . - 0 ID=cds-HBQ7388152.1;Parent=gene-L8R42_000009;Dbxref=NCBI_GP:HBQ7388152.1;Name=HBQ7388152.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=L8R42_000009;product=gluconokinase;protein_id=HBQ7388152.1;transl_table=11 DAFVNP010000001.1 tpg gene 13961 14992 . + . ID=gene-L8R42_000010;Name=L8R42_000010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000010 DAFVNP010000001.1 Protein Homology CDS 13961 14992 . + 0 ID=cds-HBQ7388153.1;Parent=gene-L8R42_000010;Dbxref=NCBI_GP:HBQ7388153.1;Name=HBQ7388153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=L8R42_000010;product=L-idonate 5-dehydrogenase;protein_id=HBQ7388153.1;transl_table=11 DAFVNP010000001.1 tpg gene 15017 15781 . + . ID=gene-L8R42_000011;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=L8R42_000011 DAFVNP010000001.1 Protein Homology CDS 15017 15781 . + 0 ID=cds-HBQ7388154.1;Parent=gene-L8R42_000011;Dbxref=NCBI_GP:HBQ7388154.1;Name=HBQ7388154.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=L8R42_000011;product=gluconate 5-dehydrogenase;protein_id=HBQ7388154.1;transl_table=11 DAFVNP010000001.1 tpg gene 15843 17162 . + . ID=gene-L8R42_000012;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=L8R42_000012 DAFVNP010000001.1 Protein Homology CDS 15843 17162 . + 0 ID=cds-HBQ7388155.1;Parent=gene-L8R42_000012;Dbxref=NCBI_GP:HBQ7388155.1;Name=HBQ7388155.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=L8R42_000012;product=gnt-II system L-idonate transporter;protein_id=HBQ7388155.1;transl_table=11 DAFVNP010000001.1 tpg gene 17226 18224 . + . ID=gene-L8R42_000013;Name=L8R42_000013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000013 DAFVNP010000001.1 Protein Homology CDS 17226 18224 . + 0 ID=cds-HBQ7388156.1;Parent=gene-L8R42_000013;Dbxref=NCBI_GP:HBQ7388156.1;Name=HBQ7388156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=L8R42_000013;product=LacI family DNA-binding transcriptional regulator;protein_id=HBQ7388156.1;transl_table=11 DAFVNP010000001.1 tpg gene 18441 19523 . - . ID=gene-L8R42_000014;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=L8R42_000014 DAFVNP010000001.1 Protein Homology CDS 18441 19523 . - 0 ID=cds-HBQ7388157.1;Parent=gene-L8R42_000014;Dbxref=NCBI_GP:HBQ7388157.1;Name=HBQ7388157.1;gbkey=CDS;gene=lptG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=L8R42_000014;product=LPS export ABC transporter permease LptG;protein_id=HBQ7388157.1;transl_table=11 DAFVNP010000001.1 tpg gene 19523 20623 . - . ID=gene-L8R42_000015;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=L8R42_000015 DAFVNP010000001.1 Protein Homology CDS 19523 20623 . - 0 ID=cds-HBQ7388158.1;Parent=gene-L8R42_000015;Dbxref=NCBI_GP:HBQ7388158.1;Name=HBQ7388158.1;gbkey=CDS;gene=lptF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=L8R42_000015;product=LPS export ABC transporter permease LptF;protein_id=HBQ7388158.1;transl_table=11 DAFVNP010000001.1 tpg gene 21018 22529 . + . ID=gene-L8R42_000016;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=L8R42_000016 DAFVNP010000001.1 Protein Homology CDS 21018 22529 . + 0 ID=cds-HBQ7388159.1;Parent=gene-L8R42_000016;Dbxref=NCBI_GP:HBQ7388159.1;Name=HBQ7388159.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=L8R42_000016;product=leucyl aminopeptidase;protein_id=HBQ7388159.1;transl_table=11 DAFVNP010000001.1 tpg gene 22666 23109 . + . ID=gene-L8R42_000017;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=L8R42_000017 DAFVNP010000001.1 Protein Homology CDS 22666 23109 . + 0 ID=cds-HBQ7388160.1;Parent=gene-L8R42_000017;Dbxref=NCBI_GP:HBQ7388160.1;Name=HBQ7388160.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=L8R42_000017;product=DNA polymerase III subunit chi;protein_id=HBQ7388160.1;transl_table=11 DAFVNP010000001.1 tpg gene 23109 25964 . + . ID=gene-L8R42_000018;Name=L8R42_000018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000018 DAFVNP010000001.1 Protein Homology CDS 23109 25964 . + 0 ID=cds-HBQ7388161.1;Parent=gene-L8R42_000018;Dbxref=NCBI_GP:HBQ7388161.1;Name=HBQ7388161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=L8R42_000018;product=valine--tRNA ligase;protein_id=HBQ7388161.1;transl_table=11 DAFVNP010000001.1 tpg gene 26106 27293 . - . ID=gene-L8R42_000019;Name=L8R42_000019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000019 DAFVNP010000001.1 Protein Homology CDS 26106 27293 . - 0 ID=cds-HBQ7388162.1;Parent=gene-L8R42_000019;Dbxref=NCBI_GP:HBQ7388162.1;Name=HBQ7388162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=L8R42_000019;product=DUF898 domain-containing protein;protein_id=HBQ7388162.1;transl_table=11 DAFVNP010000001.1 tpg gene 27488 27991 . + . ID=gene-L8R42_000020;Name=L8R42_000020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000020 DAFVNP010000001.1 Protein Homology CDS 27488 27991 . + 0 ID=cds-HBQ7388163.1;Parent=gene-L8R42_000020;Dbxref=NCBI_GP:HBQ7388163.1;Name=HBQ7388163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=L8R42_000020;product=GNAT family N-acetyltransferase;protein_id=HBQ7388163.1;transl_table=11 DAFVNP010000001.1 tpg gene 28098 28586 . + . ID=gene-L8R42_000021;Name=L8R42_000021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000021 DAFVNP010000001.1 Protein Homology CDS 28098 28586 . + 0 ID=cds-HBQ7388164.1;Parent=gene-L8R42_000021;Dbxref=NCBI_GP:HBQ7388164.1;Name=HBQ7388164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=L8R42_000021;product=DUF3617 domain-containing protein;protein_id=HBQ7388164.1;transl_table=11 DAFVNP010000001.1 tpg gene 28820 29584 . - . ID=gene-L8R42_000022;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=L8R42_000022 DAFVNP010000001.1 Protein Homology CDS 28820 29584 . - 0 ID=cds-HBQ7388165.1;Parent=gene-L8R42_000022;Dbxref=NCBI_GP:HBQ7388165.1;Name=HBQ7388165.1;gbkey=CDS;gene=miaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109010.1;locus_tag=L8R42_000022;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=HBQ7388165.1;transl_table=11 DAFVNP010000001.1 tpg gene 29643 30059 . - . ID=gene-L8R42_000023;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=L8R42_000023 DAFVNP010000001.1 Protein Homology CDS 29643 30059 . - 0 ID=cds-HBQ7388166.1;Parent=gene-L8R42_000023;Dbxref=NCBI_GP:HBQ7388166.1;Name=HBQ7388166.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=L8R42_000023;product=ribonuclease E inhibitor RraB;protein_id=HBQ7388166.1;transl_table=11 DAFVNP010000001.1 tpg gene 30225 31229 . + . ID=gene-L8R42_000024;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=L8R42_000024 DAFVNP010000001.1 Protein Homology CDS 30225 31229 . + 0 ID=cds-HBQ7388167.1;Parent=gene-L8R42_000024;Dbxref=NCBI_GP:HBQ7388167.1;Name=HBQ7388167.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=L8R42_000024;product=ornithine carbamoyltransferase;protein_id=HBQ7388167.1;transl_table=11 DAFVNP010000001.1 tpg gene 31304 31756 . - . ID=gene-L8R42_000025;Name=L8R42_000025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000025 DAFVNP010000001.1 Protein Homology CDS 31304 31756 . - 0 ID=cds-HBQ7388168.1;Parent=gene-L8R42_000025;Dbxref=NCBI_GP:HBQ7388168.1;Name=HBQ7388168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=L8R42_000025;product=YhcH/YjgK/YiaL family protein;protein_id=HBQ7388168.1;transl_table=11 DAFVNP010000001.1 tpg gene 32432 33652 . + . ID=gene-L8R42_000026;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=L8R42_000026 DAFVNP010000001.1 Protein Homology CDS 32432 33652 . + 0 ID=cds-HBQ7388169.1;Parent=gene-L8R42_000026;Dbxref=NCBI_GP:HBQ7388169.1;Name=HBQ7388169.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=L8R42_000026;product=arginine deiminase;protein_id=HBQ7388169.1;transl_table=11 DAFVNP010000001.1 tpg gene 33663 34595 . + . ID=gene-L8R42_000027;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=L8R42_000027 DAFVNP010000001.1 Protein Homology CDS 33663 34595 . + 0 ID=cds-HBQ7388170.1;Parent=gene-L8R42_000027;Dbxref=NCBI_GP:HBQ7388170.1;Name=HBQ7388170.1;gbkey=CDS;gene=arcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=L8R42_000027;product=carbamate kinase;protein_id=HBQ7388170.1;transl_table=11 DAFVNP010000001.1 tpg gene 34707 35711 . + . ID=gene-L8R42_000028;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=L8R42_000028 DAFVNP010000001.1 Protein Homology CDS 34707 35711 . + 0 ID=cds-HBQ7388171.1;Parent=gene-L8R42_000028;Dbxref=NCBI_GP:HBQ7388171.1;Name=HBQ7388171.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=L8R42_000028;product=ornithine carbamoyltransferase;protein_id=HBQ7388171.1;transl_table=11 DAFVNP010000001.1 tpg gene 35767 37170 . + . ID=gene-L8R42_000029;Name=L8R42_000029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000029 DAFVNP010000001.1 Protein Homology CDS 35767 37170 . + 0 ID=cds-HBQ7388172.1;Parent=gene-L8R42_000029;Dbxref=NCBI_GP:HBQ7388172.1;Name=HBQ7388172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=L8R42_000029;product=YfcC family protein;protein_id=HBQ7388172.1;transl_table=11 DAFVNP010000001.1 tpg gene 37357 37845 . + . ID=gene-L8R42_000030;Name=L8R42_000030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000030 DAFVNP010000001.1 Protein Homology CDS 37357 37845 . + 0 ID=cds-HBQ7388173.1;Parent=gene-L8R42_000030;Dbxref=NCBI_GP:HBQ7388173.1;Name=HBQ7388173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=L8R42_000030;product=arginine repressor;protein_id=HBQ7388173.1;transl_table=11 DAFVNP010000001.1 tpg pseudogene 37815 37956 . - . ID=gene-L8R42_000031;Name=L8R42_000031;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_000031;pseudo=true DAFVNP010000001.1 Protein Homology CDS 37815 37956 . - 0 ID=cds-L8R42_000031;Parent=gene-L8R42_000031;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=L8R42_000031;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000001.1 tpg gene 37936 38037 . + . ID=gene-L8R42_000032;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=L8R42_000032 DAFVNP010000001.1 Protein Homology CDS 37936 38037 . + 0 ID=cds-HBQ7388174.1;Parent=gene-L8R42_000032;Dbxref=NCBI_GP:HBQ7388174.1;Name=HBQ7388174.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463321.1;locus_tag=L8R42_000032;product=pyr operon leader peptide;protein_id=HBQ7388174.1;transl_table=11 DAFVNP010000001.1 tpg gene 38073 39008 . + . ID=gene-L8R42_000033;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=L8R42_000033 DAFVNP010000001.1 Protein Homology CDS 38073 39008 . + 0 ID=cds-HBQ7388175.1;Parent=gene-L8R42_000033;Dbxref=NCBI_GP:HBQ7388175.1;Name=HBQ7388175.1;gbkey=CDS;gene=pyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=L8R42_000033;product=aspartate carbamoyltransferase;protein_id=HBQ7388175.1;transl_table=11 DAFVNP010000001.1 tpg gene 39021 39482 . + . ID=gene-L8R42_000034;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=L8R42_000034 DAFVNP010000001.1 Protein Homology CDS 39021 39482 . + 0 ID=cds-HBQ7388176.1;Parent=gene-L8R42_000034;Dbxref=NCBI_GP:HBQ7388176.1;Name=HBQ7388176.1;gbkey=CDS;gene=pyrI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=L8R42_000034;product=aspartate carbamoyltransferase regulatory subunit;protein_id=HBQ7388176.1;transl_table=11 DAFVNP010000001.1 tpg gene 39559 39945 . + . ID=gene-L8R42_000035;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=L8R42_000035 DAFVNP010000001.1 Protein Homology CDS 39559 39945 . + 0 ID=cds-HBQ7388177.1;Parent=gene-L8R42_000035;Dbxref=NCBI_GP:HBQ7388177.1;Name=HBQ7388177.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=L8R42_000035;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=HBQ7388177.1;transl_table=11 DAFVNP010000001.1 tpg gene 40020 40466 . + . ID=gene-L8R42_000036;Name=L8R42_000036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000036 DAFVNP010000001.1 Protein Homology CDS 40020 40466 . + 0 ID=cds-HBQ7388178.1;Parent=gene-L8R42_000036;Dbxref=NCBI_GP:HBQ7388178.1;Name=HBQ7388178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=L8R42_000036;product=transposase;protein_id=HBQ7388178.1;transl_table=11 DAFVNP010000001.1 tpg gene 40582 43290 . - . ID=gene-L8R42_000037;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=L8R42_000037 DAFVNP010000001.1 Protein Homology CDS 40582 43290 . - 0 ID=cds-HBQ7388179.1;Parent=gene-L8R42_000037;Dbxref=NCBI_GP:HBQ7388179.1;Name=HBQ7388179.1;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=L8R42_000037;product=magnesium-translocating P-type ATPase;protein_id=HBQ7388179.1;transl_table=11 DAFVNP010000001.1 tpg gene 43431 43529 . - . ID=gene-L8R42_000038;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=L8R42_000038 DAFVNP010000001.1 Protein Homology CDS 43431 43529 . - 0 ID=cds-HBQ7388180.1;Parent=gene-L8R42_000038;Dbxref=NCBI_GP:HBQ7388180.1;Name=HBQ7388180.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.1;locus_tag=L8R42_000038;product=mgtA regulatory leader peptide MgtL;protein_id=HBQ7388180.1;transl_table=11 DAFVNP010000001.1 tpg gene 43686 44633 . + . ID=gene-L8R42_000039;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=L8R42_000039 DAFVNP010000001.1 Protein Homology CDS 43686 44633 . + 0 ID=cds-HBQ7388181.1;Parent=gene-L8R42_000039;Dbxref=NCBI_GP:HBQ7388181.1;Name=HBQ7388181.1;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=L8R42_000039;product=HTH-type transcriptional regulator TreR;protein_id=HBQ7388181.1;transl_table=11 DAFVNP010000001.1 tpg gene 44771 46189 . + . ID=gene-L8R42_000040;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=L8R42_000040 DAFVNP010000001.1 Protein Homology CDS 44771 46189 . + 0 ID=cds-HBQ7388182.1;Parent=gene-L8R42_000040;Dbxref=NCBI_GP:HBQ7388182.1;Name=HBQ7388182.1;gbkey=CDS;gene=treB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=L8R42_000040;product=PTS trehalose transporter subunit IIBC;protein_id=HBQ7388182.1;transl_table=11 DAFVNP010000001.1 tpg gene 46239 47891 . + . ID=gene-L8R42_000041;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=L8R42_000041 DAFVNP010000001.1 Protein Homology CDS 46239 47891 . + 0 ID=cds-HBQ7388183.1;Parent=gene-L8R42_000041;Dbxref=NCBI_GP:HBQ7388183.1;Name=HBQ7388183.1;gbkey=CDS;gene=treC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=L8R42_000041;product=alpha%2Calpha-phosphotrehalase;protein_id=HBQ7388183.1;transl_table=11 DAFVNP010000001.1 tpg gene 48300 50438 . + . ID=gene-L8R42_000042;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=L8R42_000042 DAFVNP010000001.1 Protein Homology CDS 48300 50438 . + 0 ID=cds-HBQ7388184.1;Parent=gene-L8R42_000042;Dbxref=NCBI_GP:HBQ7388184.1;Name=HBQ7388184.1;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=L8R42_000042;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=HBQ7388184.1;transl_table=11 DAFVNP010000001.1 tpg gene 50655 51119 . + . ID=gene-L8R42_000043;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=L8R42_000043 DAFVNP010000001.1 Protein Homology CDS 50655 51119 . + 0 ID=cds-HBQ7388185.1;Parent=gene-L8R42_000043;Dbxref=NCBI_GP:HBQ7388185.1;Name=HBQ7388185.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=L8R42_000043;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=HBQ7388185.1;transl_table=11 DAFVNP010000001.1 tpg gene 51287 51517 . + . ID=gene-L8R42_000044;Name=L8R42_000044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000044 DAFVNP010000001.1 Protein Homology CDS 51287 51517 . + 0 ID=cds-HBQ7388186.1;Parent=gene-L8R42_000044;Dbxref=NCBI_GP:HBQ7388186.1;Name=HBQ7388186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=L8R42_000044;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=HBQ7388186.1;transl_table=11 DAFVNP010000001.1 tpg gene 51514 51930 . + . ID=gene-L8R42_000045;Name=L8R42_000045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000045 DAFVNP010000001.1 Protein Homology CDS 51514 51930 . + 0 ID=cds-HBQ7388187.1;Parent=gene-L8R42_000045;Dbxref=NCBI_GP:HBQ7388187.1;Name=HBQ7388187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1;locus_tag=L8R42_000045;product=type II toxin-antitoxin system VapC family toxin;protein_id=HBQ7388187.1;transl_table=11 DAFVNP010000001.1 tpg gene 51991 53904 . - . ID=gene-L8R42_000046;Name=L8R42_000046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000046 DAFVNP010000001.1 Protein Homology CDS 51991 53904 . - 0 ID=cds-HBQ7388188.1;Parent=gene-L8R42_000046;Dbxref=NCBI_GP:HBQ7388188.1;Name=HBQ7388188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=L8R42_000046;product=BglG family transcription antiterminator;protein_id=HBQ7388188.1;transl_table=11 DAFVNP010000001.1 tpg gene 53921 54661 . - . ID=gene-L8R42_000047;Name=L8R42_000047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000047 DAFVNP010000001.1 Protein Homology CDS 53921 54661 . - 0 ID=cds-HBQ7388189.1;Parent=gene-L8R42_000047;Dbxref=NCBI_GP:HBQ7388189.1;Name=HBQ7388189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=L8R42_000047;product=KDGP aldolase family protein;protein_id=HBQ7388189.1;transl_table=11 DAFVNP010000001.1 tpg gene 54658 55776 . - . ID=gene-L8R42_000048;Name=L8R42_000048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000048 DAFVNP010000001.1 Protein Homology CDS 54658 55776 . - 0 ID=cds-HBQ7388190.1;Parent=gene-L8R42_000048;Dbxref=NCBI_GP:HBQ7388190.1;Name=HBQ7388190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=L8R42_000048;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=HBQ7388190.1;transl_table=11 DAFVNP010000001.1 tpg gene 55760 56893 . - . ID=gene-L8R42_000049;Name=L8R42_000049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000049 DAFVNP010000001.1 Protein Homology CDS 55760 56893 . - 0 ID=cds-HBQ7388191.1;Parent=gene-L8R42_000049;Dbxref=NCBI_GP:HBQ7388191.1;Name=HBQ7388191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=L8R42_000049;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=HBQ7388191.1;transl_table=11 DAFVNP010000001.1 tpg gene 56952 57596 . - . ID=gene-L8R42_000050;Name=L8R42_000050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000050 DAFVNP010000001.1 Protein Homology CDS 56952 57596 . - 0 ID=cds-HBQ7388192.1;Parent=gene-L8R42_000050;Dbxref=NCBI_GP:HBQ7388192.1;Name=HBQ7388192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=L8R42_000050;product=DUF4310 family protein;protein_id=HBQ7388192.1;transl_table=11 DAFVNP010000001.1 tpg gene 57608 58384 . - . ID=gene-L8R42_000051;Name=L8R42_000051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000051 DAFVNP010000001.1 Protein Homology CDS 57608 58384 . - 0 ID=cds-HBQ7388193.1;Parent=gene-L8R42_000051;Dbxref=NCBI_GP:HBQ7388193.1;Name=HBQ7388193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=L8R42_000051;product=DUF4311 domain-containing protein;protein_id=HBQ7388193.1;transl_table=11 DAFVNP010000001.1 tpg gene 58407 58709 . - . ID=gene-L8R42_000052;Name=L8R42_000052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000052 DAFVNP010000001.1 Protein Homology CDS 58407 58709 . - 0 ID=cds-HBQ7388194.1;Parent=gene-L8R42_000052;Dbxref=NCBI_GP:HBQ7388194.1;Name=HBQ7388194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=L8R42_000052;product=DUF4312 family protein;protein_id=HBQ7388194.1;transl_table=11 DAFVNP010000001.1 tpg gene 58709 59071 . - . ID=gene-L8R42_000053;Name=L8R42_000053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000053 DAFVNP010000001.1 Protein Homology CDS 58709 59071 . - 0 ID=cds-HBQ7388195.1;Parent=gene-L8R42_000053;Dbxref=NCBI_GP:HBQ7388195.1;Name=HBQ7388195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=L8R42_000053;product=hypothetical protein;protein_id=HBQ7388195.1;transl_table=11 DAFVNP010000001.1 tpg gene 59082 59420 . - . ID=gene-L8R42_000054;Name=L8R42_000054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000054 DAFVNP010000001.1 Protein Homology CDS 59082 59420 . - 0 ID=cds-HBQ7388196.1;Parent=gene-L8R42_000054;Dbxref=NCBI_GP:HBQ7388196.1;Name=HBQ7388196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=L8R42_000054;product=glycine dehydrogenase;protein_id=HBQ7388196.1;transl_table=11 DAFVNP010000001.1 tpg gene 59698 60084 . - . ID=gene-L8R42_000055;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=L8R42_000055 DAFVNP010000001.1 Protein Homology CDS 59698 60084 . - 0 ID=cds-HBQ7388197.1;Parent=gene-L8R42_000055;Dbxref=NCBI_GP:HBQ7388197.1;Name=HBQ7388197.1;gbkey=CDS;gene=cybC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=L8R42_000055;product=cytochrome b562;protein_id=HBQ7388197.1;transl_table=11 DAFVNP010000001.1 tpg gene 60183 61535 . - . ID=gene-L8R42_000056;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=L8R42_000056 DAFVNP010000001.1 Protein Homology CDS 60183 61535 . - 0 ID=cds-HBQ7388198.1;Parent=gene-L8R42_000056;Dbxref=NCBI_GP:HBQ7388198.1;Name=HBQ7388198.1;gbkey=CDS;gene=pmbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=L8R42_000056;product=metalloprotease PmbA;protein_id=HBQ7388198.1;transl_table=11 DAFVNP010000001.1 tpg gene 61631 62182 . + . ID=gene-L8R42_000057;Name=L8R42_000057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000057 DAFVNP010000001.1 Protein Homology CDS 61631 62182 . + 0 ID=cds-HBQ7388199.1;Parent=gene-L8R42_000057;Dbxref=NCBI_GP:HBQ7388199.1;Name=HBQ7388199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=L8R42_000057;product=ribosome-associated protein;protein_id=HBQ7388199.1;transl_table=11 DAFVNP010000001.1 tpg gene 62238 63122 . - . ID=gene-L8R42_000058;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=L8R42_000058 DAFVNP010000001.1 Protein Homology CDS 62238 63122 . - 0 ID=cds-HBQ7388200.1;Parent=gene-L8R42_000058;Dbxref=NCBI_GP:HBQ7388200.1;Name=HBQ7388200.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=L8R42_000058;product=sugar phosphate isomerase/epimerase IolH;protein_id=HBQ7388200.1;transl_table=11 DAFVNP010000001.1 tpg gene 63175 63990 . - . ID=gene-L8R42_000059;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=L8R42_000059 DAFVNP010000001.1 Protein Homology CDS 63175 63990 . - 0 ID=cds-HBQ7388201.1;Parent=gene-L8R42_000059;Dbxref=NCBI_GP:HBQ7388201.1;Name=HBQ7388201.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=L8R42_000059;product=2-keto-myo-inositol isomerase IolI2;protein_id=HBQ7388201.1;transl_table=11 DAFVNP010000001.1 tpg gene 64151 65377 . - . ID=gene-L8R42_000060;Name=L8R42_000060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000060 DAFVNP010000001.1 Protein Homology CDS 64151 65377 . - 0 ID=cds-HBQ7388202.1;Parent=gene-L8R42_000060;Dbxref=NCBI_GP:HBQ7388202.1;Name=HBQ7388202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=L8R42_000060;product=MFS transporter;protein_id=HBQ7388202.1;transl_table=11 DAFVNP010000001.1 tpg gene 65450 66472 . - . ID=gene-L8R42_000061;Name=iolG2;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=L8R42_000061 DAFVNP010000001.1 Protein Homology CDS 65450 66472 . - 0 ID=cds-HBQ7388203.1;Parent=gene-L8R42_000061;Dbxref=NCBI_GP:HBQ7388203.1;Name=HBQ7388203.1;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=L8R42_000061;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=HBQ7388203.1;transl_table=11 DAFVNP010000001.1 tpg gene 66653 68593 . - . ID=gene-L8R42_000062;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=L8R42_000062 DAFVNP010000001.1 Protein Homology CDS 66653 68593 . - 0 ID=cds-HBQ7388204.1;Parent=gene-L8R42_000062;Dbxref=NCBI_GP:HBQ7388204.1;Name=HBQ7388204.1;gbkey=CDS;gene=iolD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=L8R42_000062;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=HBQ7388204.1;transl_table=11 DAFVNP010000001.1 tpg gene 69010 70947 . + . ID=gene-L8R42_000063;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=L8R42_000063 DAFVNP010000001.1 Protein Homology CDS 69010 70947 . + 0 ID=cds-HBQ7388205.1;Parent=gene-L8R42_000063;Dbxref=NCBI_GP:HBQ7388205.1;Name=HBQ7388205.1;gbkey=CDS;gene=iolC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=L8R42_000063;product=5-dehydro-2-deoxygluconokinase;protein_id=HBQ7388205.1;transl_table=11 DAFVNP010000001.1 tpg gene 71008 72174 . + . ID=gene-L8R42_000064;Name=L8R42_000064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000064 DAFVNP010000001.1 Protein Homology CDS 71008 72174 . + 0 ID=cds-HBQ7388206.1;Parent=gene-L8R42_000064;Dbxref=NCBI_GP:HBQ7388206.1;Name=HBQ7388206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=L8R42_000064;product=MFS transporter;protein_id=HBQ7388206.1;transl_table=11 DAFVNP010000001.1 tpg gene 72171 73004 . - . ID=gene-L8R42_000065;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=L8R42_000065 DAFVNP010000001.1 Protein Homology CDS 72171 73004 . - 0 ID=cds-HBQ7388207.1;Parent=gene-L8R42_000065;Dbxref=NCBI_GP:HBQ7388207.1;Name=HBQ7388207.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=L8R42_000065;product=2-keto-myo-inositol isomerase IolI1;protein_id=HBQ7388207.1;transl_table=11 DAFVNP010000001.1 tpg gene 73005 74348 . - . ID=gene-L8R42_000066;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=L8R42_000066 DAFVNP010000001.1 Protein Homology CDS 73005 74348 . - 0 ID=cds-HBQ7388208.1;Parent=gene-L8R42_000066;Dbxref=NCBI_GP:HBQ7388208.1;Name=HBQ7388208.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=L8R42_000066;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=HBQ7388208.1;transl_table=11 DAFVNP010000001.1 tpg gene 74446 75456 . - . ID=gene-L8R42_000067;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=L8R42_000067 DAFVNP010000001.1 Protein Homology CDS 74446 75456 . - 0 ID=cds-HBQ7388209.1;Parent=gene-L8R42_000067;Dbxref=NCBI_GP:HBQ7388209.1;Name=HBQ7388209.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=L8R42_000067;product=inositol 2-dehydrogenase IolG1;protein_id=HBQ7388209.1;transl_table=11 DAFVNP010000001.1 tpg gene 75475 76395 . - . ID=gene-L8R42_000068;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=L8R42_000068 DAFVNP010000001.1 Protein Homology CDS 75475 76395 . - 0 ID=cds-HBQ7388210.1;Parent=gene-L8R42_000068;Dbxref=NCBI_GP:HBQ7388210.1;Name=HBQ7388210.1;gbkey=CDS;gene=iolE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=L8R42_000068;product=myo-inosose-2 dehydratase;protein_id=HBQ7388210.1;transl_table=11 DAFVNP010000001.1 tpg gene 76655 77479 . - . ID=gene-L8R42_000069;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=L8R42_000069 DAFVNP010000001.1 Protein Homology CDS 76655 77479 . - 0 ID=cds-HBQ7388211.1;Parent=gene-L8R42_000069;Dbxref=NCBI_GP:HBQ7388211.1;Name=HBQ7388211.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=L8R42_000069;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=HBQ7388211.1;transl_table=11 DAFVNP010000001.1 tpg pseudogene 77602 77904 . + . ID=gene-L8R42_000070;Name=L8R42_000070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_000070;pseudo=true DAFVNP010000001.1 Protein Homology CDS 77602 77904 . + 0 ID=cds-L8R42_000070;Parent=gene-L8R42_000070;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=L8R42_000070;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000001.1 tpg gene 77920 79425 . + . ID=gene-L8R42_000071;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=L8R42_000071 DAFVNP010000001.1 Protein Homology CDS 77920 79425 . + 0 ID=cds-HBQ7388212.1;Parent=gene-L8R42_000071;Dbxref=NCBI_GP:HBQ7388212.1;Name=HBQ7388212.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=L8R42_000071;product=malonate-semialdehyde dehydrogenase IolA;protein_id=HBQ7388212.1;transl_table=11 DAFVNP010000001.1 tpg gene 79450 80259 . + . ID=gene-L8R42_000072;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=L8R42_000072 DAFVNP010000001.1 Protein Homology CDS 79450 80259 . + 0 ID=cds-HBQ7388213.1;Parent=gene-L8R42_000072;Dbxref=NCBI_GP:HBQ7388213.1;Name=HBQ7388213.1;gbkey=CDS;gene=iolB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=L8R42_000072;product=5-deoxy-glucuronate isomerase;protein_id=HBQ7388213.1;transl_table=11 DAFVNP010000001.1 tpg gene 80612 82048 . - . ID=gene-L8R42_000073;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=L8R42_000073 DAFVNP010000001.1 Protein Homology CDS 80612 82048 . - 0 ID=cds-HBQ7388214.1;Parent=gene-L8R42_000073;Dbxref=NCBI_GP:HBQ7388214.1;Name=HBQ7388214.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=L8R42_000073;product=myo-inositol import MFS transporter IolT2;protein_id=HBQ7388214.1;transl_table=11 DAFVNP010000001.1 tpg gene 82085 82279 . + . ID=gene-L8R42_000074;Name=L8R42_000074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000074 DAFVNP010000001.1 Protein Homology CDS 82085 82279 . + 0 ID=cds-HBQ7388215.1;Parent=gene-L8R42_000074;Dbxref=NCBI_GP:HBQ7388215.1;Name=HBQ7388215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667713.1;locus_tag=L8R42_000074;product=hypothetical protein;protein_id=HBQ7388215.1;transl_table=11 DAFVNP010000001.1 tpg gene 82507 83940 . + . ID=gene-L8R42_000075;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=L8R42_000075 DAFVNP010000001.1 Protein Homology CDS 82507 83940 . + 0 ID=cds-HBQ7388216.1;Parent=gene-L8R42_000075;Dbxref=NCBI_GP:HBQ7388216.1;Name=HBQ7388216.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=L8R42_000075;product=myo-inositol import MFS transporter IolT1;protein_id=HBQ7388216.1;transl_table=11 DAFVNP010000001.1 tpg gene 83991 84824 . - . ID=gene-L8R42_000076;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=L8R42_000076 DAFVNP010000001.1 Protein Homology CDS 83991 84824 . - 0 ID=cds-HBQ7388217.1;Parent=gene-L8R42_000076;Dbxref=NCBI_GP:HBQ7388217.1;Name=HBQ7388217.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=L8R42_000076;product=myo-inositol utilization transcriptional regulator IolR;protein_id=HBQ7388217.1;transl_table=11 DAFVNP010000001.1 tpg gene 85315 86694 . - . ID=gene-L8R42_000077;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=L8R42_000077 DAFVNP010000001.1 Protein Homology CDS 85315 86694 . - 0 ID=cds-HBQ7388218.1;Parent=gene-L8R42_000077;Dbxref=NCBI_GP:HBQ7388218.1;Name=HBQ7388218.1;gbkey=CDS;gene=mpl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=L8R42_000077;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=HBQ7388218.1;transl_table=11 DAFVNP010000001.1 tpg gene 86869 87867 . + . ID=gene-L8R42_000078;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=L8R42_000078 DAFVNP010000001.1 Protein Homology CDS 86869 87867 . + 0 ID=cds-HBQ7388219.1;Parent=gene-L8R42_000078;Dbxref=NCBI_GP:HBQ7388219.1;Name=HBQ7388219.1;gbkey=CDS;gene=fbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=L8R42_000078;product=class 1 fructose-bisphosphatase;protein_id=HBQ7388219.1;transl_table=11 DAFVNP010000001.1 tpg gene 88094 88624 . + . ID=gene-L8R42_000079;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=L8R42_000079 DAFVNP010000001.1 Protein Homology CDS 88094 88624 . + 0 ID=cds-HBQ7388220.1;Parent=gene-L8R42_000079;Dbxref=NCBI_GP:HBQ7388220.1;Name=HBQ7388220.1;gbkey=CDS;gene=ppa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=L8R42_000079;product=inorganic diphosphatase;protein_id=HBQ7388220.1;transl_table=11 DAFVNP010000001.1 tpg gene 89034 90197 . + . ID=gene-L8R42_000080;Name=L8R42_000080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000080 DAFVNP010000001.1 Protein Homology CDS 89034 90197 . + 0 ID=cds-HBQ7388221.1;Parent=gene-L8R42_000080;Dbxref=NCBI_GP:HBQ7388221.1;Name=HBQ7388221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=L8R42_000080;product=metallo-dependent hydrolase;protein_id=HBQ7388221.1;transl_table=11 DAFVNP010000001.1 tpg gene 90194 91402 . + . ID=gene-L8R42_000081;Name=L8R42_000081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000081 DAFVNP010000001.1 Protein Homology CDS 90194 91402 . + 0 ID=cds-HBQ7388222.1;Parent=gene-L8R42_000081;Dbxref=NCBI_GP:HBQ7388222.1;Name=HBQ7388222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=L8R42_000081;product=MFS transporter;protein_id=HBQ7388222.1;transl_table=11 DAFVNP010000001.1 tpg gene 91456 91800 . - . ID=gene-L8R42_000082;Name=L8R42_000082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000082 DAFVNP010000001.1 Protein Homology CDS 91456 91800 . - 0 ID=cds-HBQ7388223.1;Parent=gene-L8R42_000082;Dbxref=NCBI_GP:HBQ7388223.1;Name=HBQ7388223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=L8R42_000082;product=gamma-glutamylcyclotransferase;protein_id=HBQ7388223.1;transl_table=11 DAFVNP010000001.1 tpg gene 91803 95582 . - . ID=gene-L8R42_000083;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=L8R42_000083 DAFVNP010000001.1 Protein Homology CDS 91803 95582 . - 0 ID=cds-HBQ7388224.1;Parent=gene-L8R42_000083;Dbxref=NCBI_GP:HBQ7388224.1;Name=HBQ7388224.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=L8R42_000083;product=autotransporter assembly complex protein TamB;protein_id=HBQ7388224.1;transl_table=11 DAFVNP010000001.1 tpg gene 95579 97312 . - . ID=gene-L8R42_000084;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=L8R42_000084 DAFVNP010000001.1 Protein Homology CDS 95579 97312 . - 0 ID=cds-HBQ7388225.1;Parent=gene-L8R42_000084;Dbxref=NCBI_GP:HBQ7388225.1;Name=HBQ7388225.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=L8R42_000084;product=autotransporter assembly complex protein TamA;protein_id=HBQ7388225.1;transl_table=11 DAFVNP010000001.1 tpg gene 97525 98163 . + . ID=gene-L8R42_000085;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=L8R42_000085 DAFVNP010000001.1 Protein Homology CDS 97525 98163 . + 0 ID=cds-HBQ7388226.1;Parent=gene-L8R42_000085;Dbxref=NCBI_GP:HBQ7388226.1;Name=HBQ7388226.1;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=L8R42_000085;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=HBQ7388226.1;transl_table=11 DAFVNP010000001.1 tpg gene 98346 99689 . + . ID=gene-L8R42_000086;Name=L8R42_000086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000086 DAFVNP010000001.1 Protein Homology CDS 98346 99689 . + 0 ID=cds-HBQ7388227.1;Parent=gene-L8R42_000086;Dbxref=NCBI_GP:HBQ7388227.1;Name=HBQ7388227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=L8R42_000086;product=HlyC/CorC family transporter;protein_id=HBQ7388227.1;transl_table=11 DAFVNP010000001.1 tpg gene 99774 99980 . - . ID=gene-L8R42_000087;Name=L8R42_000087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000087 DAFVNP010000001.1 Protein Homology CDS 99774 99980 . - 0 ID=cds-HBQ7388228.1;Parent=gene-L8R42_000087;Dbxref=NCBI_GP:HBQ7388228.1;Name=HBQ7388228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=L8R42_000087;product=DUF1107 domain-containing protein;protein_id=HBQ7388228.1;transl_table=11 DAFVNP010000001.1 tpg gene 100307 100864 . + . ID=gene-L8R42_000088;Name=L8R42_000088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000088 DAFVNP010000001.1 Protein Homology CDS 100307 100864 . + 0 ID=cds-HBQ7388229.1;Parent=gene-L8R42_000088;Dbxref=NCBI_GP:HBQ7388229.1;Name=HBQ7388229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=L8R42_000088;product=YtfJ family protein;protein_id=HBQ7388229.1;transl_table=11 DAFVNP010000001.1 tpg gene 100854 101594 . - . ID=gene-L8R42_000089;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=L8R42_000089 DAFVNP010000001.1 Protein Homology CDS 100854 101594 . - 0 ID=cds-HBQ7388230.1;Parent=gene-L8R42_000089;Dbxref=NCBI_GP:HBQ7388230.1;Name=HBQ7388230.1;gbkey=CDS;gene=cysQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=L8R42_000089;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=HBQ7388230.1;transl_table=11 DAFVNP010000001.1 tpg gene 101862 103805 . + . ID=gene-L8R42_000090;Name=L8R42_000090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000090 DAFVNP010000001.1 Protein Homology CDS 101862 103805 . + 0 ID=cds-HBQ7388231.1;Parent=gene-L8R42_000090;Dbxref=NCBI_GP:HBQ7388231.1;Name=HBQ7388231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=L8R42_000090;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=HBQ7388231.1;transl_table=11 DAFVNP010000001.1 tpg gene 103863 104249 . - . ID=gene-L8R42_000091;Name=L8R42_000091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000091 DAFVNP010000001.1 Protein Homology CDS 103863 104249 . - 0 ID=cds-HBQ7388232.1;Parent=gene-L8R42_000091;Dbxref=NCBI_GP:HBQ7388232.1;Name=HBQ7388232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=L8R42_000091;product=winged helix-turn-helix transcriptional regulator;protein_id=HBQ7388232.1;transl_table=11 DAFVNP010000001.1 tpg gene 104337 105185 . + . ID=gene-L8R42_000092;Name=L8R42_000092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000092 DAFVNP010000001.1 Protein Homology CDS 104337 105185 . + 0 ID=cds-HBQ7388233.1;Parent=gene-L8R42_000092;Dbxref=NCBI_GP:HBQ7388233.1;Name=HBQ7388233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=L8R42_000092;product=SDR family oxidoreductase;protein_id=HBQ7388233.1;transl_table=11 DAFVNP010000001.1 tpg gene 105266 106231 . + . ID=gene-L8R42_000093;Name=L8R42_000093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000093 DAFVNP010000001.1 Protein Homology CDS 105266 106231 . + 0 ID=cds-HBQ7388234.1;Parent=gene-L8R42_000093;Dbxref=NCBI_GP:HBQ7388234.1;Name=HBQ7388234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=L8R42_000093;product=DMT family transporter;protein_id=HBQ7388234.1;transl_table=11 DAFVNP010000001.1 tpg gene 106334 106996 . + . ID=gene-L8R42_000094;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=L8R42_000094 DAFVNP010000001.1 Protein Homology CDS 106334 106996 . + 0 ID=cds-HBQ7388235.1;Parent=gene-L8R42_000094;Dbxref=NCBI_GP:HBQ7388235.1;Name=HBQ7388235.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=L8R42_000094;product=iron-sulfur cluster repair protein YtfE;protein_id=HBQ7388235.1;transl_table=11 DAFVNP010000001.1 tpg gene 107108 108517 . - . ID=gene-L8R42_000095;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=L8R42_000095 DAFVNP010000001.1 Protein Homology CDS 107108 108517 . - 0 ID=cds-HBQ7388236.1;Parent=gene-L8R42_000095;Dbxref=NCBI_GP:HBQ7388236.1;Name=HBQ7388236.1;gbkey=CDS;gene=cycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=L8R42_000095;product=D-serine/D-alanine/glycine transporter;protein_id=HBQ7388236.1;transl_table=11 DAFVNP010000001.1 tpg gene 108813 109433 . - . ID=gene-L8R42_000096;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=L8R42_000096 DAFVNP010000001.1 Protein Homology CDS 108813 109433 . - 0 ID=cds-HBQ7388237.1;Parent=gene-L8R42_000096;Dbxref=NCBI_GP:HBQ7388237.1;Name=HBQ7388237.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=L8R42_000096;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HBQ7388237.1;transl_table=11 DAFVNP010000001.1 tpg gene 109653 110288 . + . ID=gene-L8R42_000097;Name=L8R42_000097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000097 DAFVNP010000001.1 Protein Homology CDS 109653 110288 . + 0 ID=cds-HBQ7388238.1;Parent=gene-L8R42_000097;Dbxref=NCBI_GP:HBQ7388238.1;Name=HBQ7388238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=L8R42_000097;product=OapA family protein;protein_id=HBQ7388238.1;transl_table=11 DAFVNP010000001.1 tpg gene 110338 111264 . - . ID=gene-L8R42_000098;Name=L8R42_000098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000098 DAFVNP010000001.1 Protein Homology CDS 110338 111264 . - 0 ID=cds-HBQ7388239.1;Parent=gene-L8R42_000098;Dbxref=NCBI_GP:HBQ7388239.1;Name=HBQ7388239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=L8R42_000098;product=DMT family transporter;protein_id=HBQ7388239.1;transl_table=11 DAFVNP010000001.1 tpg gene 111412 111861 . - . ID=gene-L8R42_000099;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=L8R42_000099 DAFVNP010000001.1 Protein Homology CDS 111412 111861 . - 0 ID=cds-HBQ7388240.1;Parent=gene-L8R42_000099;Dbxref=NCBI_GP:HBQ7388240.1;Name=HBQ7388240.1;gbkey=CDS;gene=rplI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=L8R42_000099;product=50S ribosomal protein L9;protein_id=HBQ7388240.1;transl_table=11 DAFVNP010000001.1 tpg gene 111903 112130 . - . ID=gene-L8R42_000100;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=L8R42_000100 DAFVNP010000001.1 Protein Homology CDS 111903 112130 . - 0 ID=cds-HBQ7388241.1;Parent=gene-L8R42_000100;Dbxref=NCBI_GP:HBQ7388241.1;Name=HBQ7388241.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=L8R42_000100;product=30S ribosomal protein S18;protein_id=HBQ7388241.1;transl_table=11 DAFVNP010000001.1 tpg gene 112135 112449 . - . ID=gene-L8R42_000101;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=L8R42_000101 DAFVNP010000001.1 Protein Homology CDS 112135 112449 . - 0 ID=cds-HBQ7388242.1;Parent=gene-L8R42_000101;Dbxref=NCBI_GP:HBQ7388242.1;Name=HBQ7388242.1;gbkey=CDS;gene=priB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=L8R42_000101;product=primosomal replication protein N;protein_id=HBQ7388242.1;transl_table=11 DAFVNP010000001.1 tpg gene 112456 112851 . - . ID=gene-L8R42_000102;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=L8R42_000102 DAFVNP010000001.1 Protein Homology CDS 112456 112851 . - 0 ID=cds-HBQ7388243.1;Parent=gene-L8R42_000102;Dbxref=NCBI_GP:HBQ7388243.1;Name=HBQ7388243.1;gbkey=CDS;gene=rpsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=L8R42_000102;product=30S ribosomal protein S6;protein_id=HBQ7388243.1;transl_table=11 DAFVNP010000001.1 tpg gene 112922 113128 . - . ID=gene-L8R42_000103;Name=L8R42_000103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000103 DAFVNP010000001.1 Protein Homology CDS 112922 113128 . - 0 ID=cds-HBQ7388244.1;Parent=gene-L8R42_000103;Dbxref=NCBI_GP:HBQ7388244.1;Name=HBQ7388244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=L8R42_000103;product=hypothetical protein;protein_id=HBQ7388244.1;transl_table=11 DAFVNP010000001.1 tpg gene 113322 113597 . + . ID=gene-L8R42_000104;Name=L8R42_000104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000104 DAFVNP010000001.1 Protein Homology CDS 113322 113597 . + 0 ID=cds-HBQ7388245.1;Parent=gene-L8R42_000104;Dbxref=NCBI_GP:HBQ7388245.1;Name=HBQ7388245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463250.1;locus_tag=L8R42_000104;product=DUF1471 domain-containing protein;protein_id=HBQ7388245.1;transl_table=11 DAFVNP010000001.1 tpg gene 113726 114412 . - . ID=gene-L8R42_000105;Name=L8R42_000105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000105 DAFVNP010000001.1 Protein Homology CDS 113726 114412 . - 0 ID=cds-HBQ7388246.1;Parent=gene-L8R42_000105;Dbxref=NCBI_GP:HBQ7388246.1;Name=HBQ7388246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=L8R42_000105;product=L-ribulose-5-phosphate 4-epimerase;protein_id=HBQ7388246.1;transl_table=11 DAFVNP010000001.1 tpg gene 114412 115266 . - . ID=gene-L8R42_000106;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=L8R42_000106 DAFVNP010000001.1 Protein Homology CDS 114412 115266 . - 0 ID=cds-HBQ7388247.1;Parent=gene-L8R42_000106;Dbxref=NCBI_GP:HBQ7388247.1;Name=HBQ7388247.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=L8R42_000106;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=HBQ7388247.1;transl_table=11 DAFVNP010000001.1 tpg gene 115276 115926 . - . ID=gene-L8R42_000107;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=L8R42_000107 DAFVNP010000001.1 Protein Homology CDS 115276 115926 . - 0 ID=cds-HBQ7388248.1;Parent=gene-L8R42_000107;Dbxref=NCBI_GP:HBQ7388248.1;Name=HBQ7388248.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=L8R42_000107;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=HBQ7388248.1;transl_table=11 DAFVNP010000001.1 tpg gene 115940 116404 . - . ID=gene-L8R42_000108;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=L8R42_000108 DAFVNP010000001.1 Protein Homology CDS 115940 116404 . - 0 ID=cds-HBQ7388249.1;Parent=gene-L8R42_000108;Dbxref=NCBI_GP:HBQ7388249.1;Name=HBQ7388249.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=L8R42_000108;product=PTS ascorbate transporter subunit IIA;protein_id=HBQ7388249.1;transl_table=11 DAFVNP010000001.1 tpg gene 116414 116719 . - . ID=gene-L8R42_000109;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=L8R42_000109 DAFVNP010000001.1 Protein Homology CDS 116414 116719 . - 0 ID=cds-HBQ7388250.1;Parent=gene-L8R42_000109;Dbxref=NCBI_GP:HBQ7388250.1;Name=HBQ7388250.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=L8R42_000109;product=PTS ascorbate transporter subunit IIB;protein_id=HBQ7388250.1;transl_table=11 DAFVNP010000001.1 tpg gene 116735 118132 . - . ID=gene-L8R42_000110;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=L8R42_000110 DAFVNP010000001.1 Protein Homology CDS 116735 118132 . - 0 ID=cds-HBQ7388251.1;Parent=gene-L8R42_000110;Dbxref=NCBI_GP:HBQ7388251.1;Name=HBQ7388251.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=L8R42_000110;product=PTS ascorbate transporter subunit IIC;protein_id=HBQ7388251.1;transl_table=11 DAFVNP010000001.1 tpg gene 118495 119559 . + . ID=gene-L8R42_000111;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=L8R42_000111 DAFVNP010000001.1 Protein Homology CDS 118495 119559 . + 0 ID=cds-HBQ7388252.1;Parent=gene-L8R42_000111;Dbxref=NCBI_GP:HBQ7388252.1;Name=HBQ7388252.1;gbkey=CDS;gene=ulaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=L8R42_000111;product=L-ascorbate 6-phosphate lactonase;protein_id=HBQ7388252.1;transl_table=11 DAFVNP010000001.1 tpg gene 119664 120419 . + . ID=gene-L8R42_000112;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=L8R42_000112 DAFVNP010000001.1 Protein Homology CDS 119664 120419 . + 0 ID=cds-HBQ7388253.1;Parent=gene-L8R42_000112;Dbxref=NCBI_GP:HBQ7388253.1;Name=HBQ7388253.1;gbkey=CDS;gene=ulaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=L8R42_000112;product=HTH-type transcriptional regulator UlaR;protein_id=HBQ7388253.1;transl_table=11 DAFVNP010000001.1 tpg gene 120416 121165 . - . ID=gene-L8R42_000113;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=L8R42_000113 DAFVNP010000001.1 Protein Homology CDS 120416 121165 . - 0 ID=cds-HBQ7388254.1;Parent=gene-L8R42_000113;Dbxref=NCBI_GP:HBQ7388254.1;Name=HBQ7388254.1;gbkey=CDS;gene=yjfP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=L8R42_000113;product=esterase;protein_id=HBQ7388254.1;transl_table=11 DAFVNP010000001.1 tpg gene 121349 121678 . + . ID=gene-L8R42_000114;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=L8R42_000114 DAFVNP010000001.1 Protein Homology CDS 121349 121678 . + 0 ID=cds-HBQ7388255.1;Parent=gene-L8R42_000114;Dbxref=NCBI_GP:HBQ7388255.1;Name=HBQ7388255.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=L8R42_000114;product=biofilm peroxide resistance protein BsmA;protein_id=HBQ7388255.1;transl_table=11 DAFVNP010000001.1 tpg gene 121809 122084 . + . ID=gene-L8R42_000115;Name=L8R42_000115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000115 DAFVNP010000001.1 Protein Homology CDS 121809 122084 . + 0 ID=cds-HBQ7388256.1;Parent=gene-L8R42_000115;Dbxref=NCBI_GP:HBQ7388256.1;Name=HBQ7388256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=L8R42_000115;product=DUF1471 domain-containing protein;protein_id=HBQ7388256.1;transl_table=11 DAFVNP010000001.1 tpg gene 122129 123751 . - . ID=gene-L8R42_000116;Name=L8R42_000116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000116 DAFVNP010000001.1 Protein Homology CDS 122129 123751 . - 0 ID=cds-HBQ7388257.1;Parent=gene-L8R42_000116;Dbxref=NCBI_GP:HBQ7388257.1;Name=HBQ7388257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=L8R42_000116;product=isovaleryl-CoA dehydrogenase;protein_id=HBQ7388257.1;transl_table=11 DAFVNP010000001.1 tpg gene 123836 124999 . - . ID=gene-L8R42_000117;Name=L8R42_000117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000117 DAFVNP010000001.1 Protein Homology CDS 123836 124999 . - 0 ID=cds-HBQ7388258.1;Parent=gene-L8R42_000117;Dbxref=NCBI_GP:HBQ7388258.1;Name=HBQ7388258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=L8R42_000117;product=glutathionylspermidine synthase family protein;protein_id=HBQ7388258.1;transl_table=11 DAFVNP010000001.1 tpg gene 125002 125640 . - . ID=gene-L8R42_000118;Name=L8R42_000118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000118 DAFVNP010000001.1 Protein Homology CDS 125002 125640 . - 0 ID=cds-HBQ7388259.1;Parent=gene-L8R42_000118;Dbxref=NCBI_GP:HBQ7388259.1;Name=HBQ7388259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=L8R42_000118;product=DUF1190 domain-containing protein;protein_id=HBQ7388259.1;transl_table=11 DAFVNP010000001.1 tpg gene 125650 126048 . - . ID=gene-L8R42_000119;Name=L8R42_000119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000119 DAFVNP010000001.1 Protein Homology CDS 125650 126048 . - 0 ID=cds-HBQ7388260.1;Parent=gene-L8R42_000119;Dbxref=NCBI_GP:HBQ7388260.1;Name=HBQ7388260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=L8R42_000119;product=DUF350 domain-containing protein;protein_id=HBQ7388260.1;transl_table=11 DAFVNP010000001.1 tpg gene 126066 126749 . - . ID=gene-L8R42_000120;Name=L8R42_000120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000120 DAFVNP010000001.1 Protein Homology CDS 126066 126749 . - 0 ID=cds-HBQ7388261.1;Parent=gene-L8R42_000120;Dbxref=NCBI_GP:HBQ7388261.1;Name=HBQ7388261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=L8R42_000120;product=YjfK family protein;protein_id=HBQ7388261.1;transl_table=11 DAFVNP010000001.1 tpg gene 126973 127671 . - . ID=gene-L8R42_000121;Name=L8R42_000121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000121 DAFVNP010000001.1 Protein Homology CDS 126973 127671 . - 0 ID=cds-HBQ7388262.1;Parent=gene-L8R42_000121;Dbxref=NCBI_GP:HBQ7388262.1;Name=HBQ7388262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=L8R42_000121;product=PspA/IM30 family protein;protein_id=HBQ7388262.1;transl_table=11 DAFVNP010000001.1 tpg gene 127686 128090 . - . ID=gene-L8R42_000122;Name=L8R42_000122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000122 DAFVNP010000001.1 Protein Homology CDS 127686 128090 . - 0 ID=cds-HBQ7388263.1;Parent=gene-L8R42_000122;Dbxref=NCBI_GP:HBQ7388263.1;Name=HBQ7388263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=L8R42_000122;product=YjfI family protein;protein_id=HBQ7388263.1;transl_table=11 DAFVNP010000001.1 tpg gene 128222 128953 . - . ID=gene-L8R42_000123;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=L8R42_000123 DAFVNP010000001.1 Protein Homology CDS 128222 128953 . - 0 ID=cds-HBQ7388264.1;Parent=gene-L8R42_000123;Dbxref=NCBI_GP:HBQ7388264.1;Name=HBQ7388264.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=L8R42_000123;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=HBQ7388264.1;transl_table=11 DAFVNP010000001.1 tpg gene 129044 131482 . - . ID=gene-L8R42_000124;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=L8R42_000124 DAFVNP010000001.1 Protein Homology CDS 129044 131482 . - 0 ID=cds-HBQ7388265.1;Parent=gene-L8R42_000124;Dbxref=NCBI_GP:HBQ7388265.1;Name=HBQ7388265.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=L8R42_000124;product=ribonuclease R;protein_id=HBQ7388265.1;transl_table=11 DAFVNP010000001.1 tpg gene 131520 131945 . - . ID=gene-L8R42_000125;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=L8R42_000125 DAFVNP010000001.1 Protein Homology CDS 131520 131945 . - 0 ID=cds-HBQ7388266.1;Parent=gene-L8R42_000125;Dbxref=NCBI_GP:HBQ7388266.1;Name=HBQ7388266.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=L8R42_000125;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=HBQ7388266.1;transl_table=11 DAFVNP010000001.1 tpg gene 132165 133463 . - . ID=gene-L8R42_000126;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=L8R42_000126 DAFVNP010000001.1 Protein Homology CDS 132165 133463 . - 0 ID=cds-HBQ7388267.1;Parent=gene-L8R42_000126;Dbxref=NCBI_GP:HBQ7388267.1;Name=HBQ7388267.1;gbkey=CDS;gene=purA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=L8R42_000126;product=adenylosuccinate synthase;protein_id=HBQ7388267.1;transl_table=11 DAFVNP010000001.1 tpg gene 133566 133763 . - . ID=gene-L8R42_000127;Name=L8R42_000127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000127 DAFVNP010000001.1 Protein Homology CDS 133566 133763 . - 0 ID=cds-HBQ7388268.1;Parent=gene-L8R42_000127;Dbxref=NCBI_GP:HBQ7388268.1;Name=HBQ7388268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=L8R42_000127;product=DUF2065 family protein;protein_id=HBQ7388268.1;transl_table=11 DAFVNP010000001.1 tpg gene 133842 134846 . - . ID=gene-L8R42_000128;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=L8R42_000128 DAFVNP010000001.1 Protein Homology CDS 133842 134846 . - 0 ID=cds-HBQ7388269.1;Parent=gene-L8R42_000128;Dbxref=NCBI_GP:HBQ7388269.1;Name=HBQ7388269.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=L8R42_000128;product=protease modulator HflC;protein_id=HBQ7388269.1;transl_table=11 DAFVNP010000001.1 tpg gene 134849 136108 . - . ID=gene-L8R42_000129;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=L8R42_000129 DAFVNP010000001.1 Protein Homology CDS 134849 136108 . - 0 ID=cds-HBQ7388270.1;Parent=gene-L8R42_000129;Dbxref=NCBI_GP:HBQ7388270.1;Name=HBQ7388270.1;gbkey=CDS;gene=hflK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=L8R42_000129;product=FtsH protease activity modulator HflK;protein_id=HBQ7388270.1;transl_table=11 DAFVNP010000001.1 tpg gene 136323 137603 . - . ID=gene-L8R42_000130;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=L8R42_000130 DAFVNP010000001.1 Protein Homology CDS 136323 137603 . - 0 ID=cds-HBQ7388271.1;Parent=gene-L8R42_000130;Dbxref=NCBI_GP:HBQ7388271.1;Name=HBQ7388271.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=L8R42_000130;product=GTPase HflX;protein_id=HBQ7388271.1;transl_table=11 DAFVNP010000001.1 tpg gene 137675 137983 . - . ID=gene-L8R42_000131;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=L8R42_000131 DAFVNP010000001.1 Protein Homology CDS 137675 137983 . - 0 ID=cds-HBQ7388272.1;Parent=gene-L8R42_000131;Dbxref=NCBI_GP:HBQ7388272.1;Name=HBQ7388272.1;gbkey=CDS;gene=hfq;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=L8R42_000131;product=RNA chaperone Hfq;protein_id=HBQ7388272.1;transl_table=11 DAFVNP010000001.1 tpg gene 138066 139016 . - . ID=gene-L8R42_000132;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=L8R42_000132 DAFVNP010000001.1 Protein Homology CDS 138066 139016 . - 0 ID=cds-HBQ7388273.1;Parent=gene-L8R42_000132;Dbxref=NCBI_GP:HBQ7388273.1;Name=HBQ7388273.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=L8R42_000132;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=HBQ7388273.1;transl_table=11 DAFVNP010000001.1 tpg gene 139009 140865 . - . ID=gene-L8R42_000133;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=L8R42_000133 DAFVNP010000001.1 Protein Homology CDS 139009 140865 . - 0 ID=cds-HBQ7388274.1;Parent=gene-L8R42_000133;Dbxref=NCBI_GP:HBQ7388274.1;Name=HBQ7388274.1;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=L8R42_000133;product=DNA mismatch repair endonuclease MutL;protein_id=HBQ7388274.1;transl_table=11 DAFVNP010000001.1 tpg gene 140875 142194 . - . ID=gene-L8R42_000134;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=L8R42_000134 DAFVNP010000001.1 Protein Homology CDS 140875 142194 . - 0 ID=cds-HBQ7388275.1;Parent=gene-L8R42_000134;Dbxref=NCBI_GP:HBQ7388275.1;Name=HBQ7388275.1;gbkey=CDS;gene=amiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=L8R42_000134;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=HBQ7388275.1;transl_table=11 DAFVNP010000001.1 tpg gene 142211 142672 . - . ID=gene-L8R42_000135;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=L8R42_000135 DAFVNP010000001.1 Protein Homology CDS 142211 142672 . - 0 ID=cds-HBQ7388276.1;Parent=gene-L8R42_000135;Dbxref=NCBI_GP:HBQ7388276.1;Name=HBQ7388276.1;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=L8R42_000135;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=HBQ7388276.1;transl_table=11 DAFVNP010000001.1 tpg gene 142644 144191 . - . ID=gene-L8R42_000136;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=L8R42_000136 DAFVNP010000001.1 Protein Homology CDS 142644 144191 . - 0 ID=cds-HBQ7388277.1;Parent=gene-L8R42_000136;Dbxref=NCBI_GP:HBQ7388277.1;Name=HBQ7388277.1;gbkey=CDS;gene=nnr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=L8R42_000136;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=HBQ7388277.1;transl_table=11 DAFVNP010000001.1 tpg gene 144190 145329 . + . ID=gene-L8R42_000137;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=L8R42_000137 DAFVNP010000001.1 Protein Homology CDS 144190 145329 . + 0 ID=cds-HBQ7388278.1;Parent=gene-L8R42_000137;Dbxref=NCBI_GP:HBQ7388278.1;Name=HBQ7388278.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=L8R42_000137;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=HBQ7388278.1;transl_table=11 ##sequence-region DAFVNP010000002.1 1 144179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000002.1 tpg region 1 144179 . + . ID=DAFVNP010000002.1:1..144179;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000002.1 tpg gene 1 5258 . + . ID=gene-L8R42_000138;Name=L8R42_000138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000138;partial=true;start_range=.,1 DAFVNP010000002.1 Protein Homology CDS 1 5258 . + 2 ID=cds-HBQ7388279.1;Parent=gene-L8R42_000138;Dbxref=NCBI_GP:HBQ7388279.1;Name=HBQ7388279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169948.1;locus_tag=L8R42_000138;partial=true;product=autotransporter adhesin BigA;protein_id=HBQ7388279.1;start_range=.,1;transl_table=11 DAFVNP010000002.1 tpg gene 5451 5621 . + . ID=gene-L8R42_000139;Name=L8R42_000139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000139 DAFVNP010000002.1 Protein Homology CDS 5451 5621 . + 0 ID=cds-HBQ7388280.1;Parent=gene-L8R42_000139;Dbxref=NCBI_GP:HBQ7388280.1;Name=HBQ7388280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=L8R42_000139;product=YhfL family protein;protein_id=HBQ7388280.1;transl_table=11 DAFVNP010000002.1 tpg gene 5766 6770 . - . ID=gene-L8R42_000140;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=L8R42_000140 DAFVNP010000002.1 Protein Homology CDS 5766 6770 . - 0 ID=cds-HBQ7388281.1;Parent=gene-L8R42_000140;Dbxref=NCBI_GP:HBQ7388281.1;Name=HBQ7388281.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=L8R42_000140;product=tryptophan--tRNA ligase;protein_id=HBQ7388281.1;transl_table=11 DAFVNP010000002.1 tpg gene 6763 7521 . - . ID=gene-L8R42_000141;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=L8R42_000141 DAFVNP010000002.1 Protein Homology CDS 6763 7521 . - 0 ID=cds-HBQ7388282.1;Parent=gene-L8R42_000141;Dbxref=NCBI_GP:HBQ7388282.1;Name=HBQ7388282.1;gbkey=CDS;gene=gph;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=L8R42_000141;product=phosphoglycolate phosphatase;protein_id=HBQ7388282.1;transl_table=11 DAFVNP010000002.1 tpg gene 7514 8191 . - . ID=gene-L8R42_000142;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=L8R42_000142 DAFVNP010000002.1 Protein Homology CDS 7514 8191 . - 0 ID=cds-HBQ7388283.1;Parent=gene-L8R42_000142;Dbxref=NCBI_GP:HBQ7388283.1;Name=HBQ7388283.1;gbkey=CDS;gene=rpe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=L8R42_000142;product=ribulose-phosphate 3-epimerase;protein_id=HBQ7388283.1;transl_table=11 DAFVNP010000002.1 tpg gene 8209 9045 . - . ID=gene-L8R42_000143;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=L8R42_000143 DAFVNP010000002.1 Protein Homology CDS 8209 9045 . - 0 ID=cds-HBQ7388284.1;Parent=gene-L8R42_000143;Dbxref=NCBI_GP:HBQ7388284.1;Name=HBQ7388284.1;gbkey=CDS;gene=dam;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=L8R42_000143;product=adenine-specific DNA-methyltransferase;protein_id=HBQ7388284.1;transl_table=11 DAFVNP010000002.1 tpg gene 9226 10503 . - . ID=gene-L8R42_000144;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=L8R42_000144 DAFVNP010000002.1 Protein Homology CDS 9226 10503 . - 0 ID=cds-HBQ7388285.1;Parent=gene-L8R42_000144;Dbxref=NCBI_GP:HBQ7388285.1;Name=HBQ7388285.1;gbkey=CDS;gene=damX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=L8R42_000144;product=cell division protein DamX;protein_id=HBQ7388285.1;transl_table=11 DAFVNP010000002.1 tpg gene 10601 11689 . - . ID=gene-L8R42_000145;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=L8R42_000145 DAFVNP010000002.1 Protein Homology CDS 10601 11689 . - 0 ID=cds-HBQ7388286.1;Parent=gene-L8R42_000145;Dbxref=NCBI_GP:HBQ7388286.1;Name=HBQ7388286.1;gbkey=CDS;gene=aroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=L8R42_000145;product=3-dehydroquinate synthase;protein_id=HBQ7388286.1;transl_table=11 DAFVNP010000002.1 tpg gene 11746 12267 . - . ID=gene-L8R42_000146;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=L8R42_000146 DAFVNP010000002.1 Protein Homology CDS 11746 12267 . - 0 ID=cds-HBQ7388287.1;Parent=gene-L8R42_000146;Dbxref=NCBI_GP:HBQ7388287.1;Name=HBQ7388287.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=L8R42_000146;product=shikimate kinase AroK;protein_id=HBQ7388287.1;transl_table=11 DAFVNP010000002.1 tpg gene 12732 13970 . - . ID=gene-L8R42_000147;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=L8R42_000147 DAFVNP010000002.1 Protein Homology CDS 12732 13970 . - 0 ID=cds-HBQ7388288.1;Parent=gene-L8R42_000147;Dbxref=NCBI_GP:HBQ7388288.1;Name=HBQ7388288.1;gbkey=CDS;gene=hofQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=L8R42_000147;product=DNA uptake porin HofQ;protein_id=HBQ7388288.1;transl_table=11 DAFVNP010000002.1 tpg gene 13885 14286 . - . ID=gene-L8R42_000148;Name=L8R42_000148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000148 DAFVNP010000002.1 Protein Homology CDS 13885 14286 . - 0 ID=cds-HBQ7388289.1;Parent=gene-L8R42_000148;Dbxref=NCBI_GP:HBQ7388289.1;Name=HBQ7388289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=L8R42_000148;product=DUF2531 family protein;protein_id=HBQ7388289.1;transl_table=11 DAFVNP010000002.1 tpg gene 14276 14749 . - . ID=gene-L8R42_000149;Name=L8R42_000149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000149 DAFVNP010000002.1 Protein Homology CDS 14276 14749 . - 0 ID=cds-HBQ7388290.1;Parent=gene-L8R42_000149;Dbxref=NCBI_GP:HBQ7388290.1;Name=HBQ7388290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=L8R42_000149;product=hypothetical protein;protein_id=HBQ7388290.1;transl_table=11 DAFVNP010000002.1 tpg gene 14733 15272 . - . ID=gene-L8R42_000150;Name=L8R42_000150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000150 DAFVNP010000002.1 Protein Homology CDS 14733 15272 . - 0 ID=cds-HBQ7388291.1;Parent=gene-L8R42_000150;Dbxref=NCBI_GP:HBQ7388291.1;Name=HBQ7388291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=L8R42_000150;product=PilN domain-containing protein;protein_id=HBQ7388291.1;transl_table=11 DAFVNP010000002.1 tpg gene 15272 16051 . - . ID=gene-L8R42_000151;Name=L8R42_000151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000151 DAFVNP010000002.1 Protein Homology CDS 15272 16051 . - 0 ID=cds-HBQ7388292.1;Parent=gene-L8R42_000151;Dbxref=NCBI_GP:HBQ7388292.1;Name=HBQ7388292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=L8R42_000151;product=DNA utilization protein HofM;protein_id=HBQ7388292.1;transl_table=11 DAFVNP010000002.1 tpg gene 16172 18724 . + . ID=gene-L8R42_000152;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=L8R42_000152 DAFVNP010000002.1 Protein Homology CDS 16172 18724 . + 0 ID=cds-HBQ7388293.1;Parent=gene-L8R42_000152;Dbxref=NCBI_GP:HBQ7388293.1;Name=HBQ7388293.1;gbkey=CDS;gene=mrcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=L8R42_000152;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=HBQ7388293.1;transl_table=11 DAFVNP010000002.1 tpg gene 18820 19383 . - . ID=gene-L8R42_000153;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=L8R42_000153 DAFVNP010000002.1 Protein Homology CDS 18820 19383 . - 0 ID=cds-HBQ7388294.1;Parent=gene-L8R42_000153;Dbxref=NCBI_GP:HBQ7388294.1;Name=HBQ7388294.1;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=L8R42_000153;product=ADP compounds hydrolase NudE;protein_id=HBQ7388294.1;transl_table=11 DAFVNP010000002.1 tpg gene 19706 21838 . + . ID=gene-L8R42_000154;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=L8R42_000154 DAFVNP010000002.1 Protein Homology CDS 19706 21838 . + 0 ID=cds-HBQ7388295.1;Parent=gene-L8R42_000154;Dbxref=NCBI_GP:HBQ7388295.1;Name=HBQ7388295.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=L8R42_000154;product=intracellular growth attenuator protein IgaA;protein_id=HBQ7388295.1;transl_table=11 DAFVNP010000002.1 tpg gene 21903 22571 . + . ID=gene-L8R42_000155;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=L8R42_000155 DAFVNP010000002.1 Protein Homology CDS 21903 22571 . + 0 ID=cds-HBQ7388296.1;Parent=gene-L8R42_000155;Dbxref=NCBI_GP:HBQ7388296.1;Name=HBQ7388296.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006893127.1;locus_tag=L8R42_000155;product=GMP/IMP nucleotidase;protein_id=HBQ7388296.1;transl_table=11 DAFVNP010000002.1 tpg gene 22582 22983 . + . ID=gene-L8R42_000156;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=L8R42_000156 DAFVNP010000002.1 Protein Homology CDS 22582 22983 . + 0 ID=cds-HBQ7388297.1;Parent=gene-L8R42_000156;Dbxref=NCBI_GP:HBQ7388297.1;Name=HBQ7388297.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=L8R42_000156;product=ribosome-associated heat shock protein Hsp15;protein_id=HBQ7388297.1;transl_table=11 DAFVNP010000002.1 tpg gene 23008 23886 . + . ID=gene-L8R42_000157;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=L8R42_000157 DAFVNP010000002.1 Protein Homology CDS 23008 23886 . + 0 ID=cds-HBQ7388298.1;Parent=gene-L8R42_000157;Dbxref=NCBI_GP:HBQ7388298.1;Name=HBQ7388298.1;gbkey=CDS;gene=hslO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=L8R42_000157;product=Hsp33 family molecular chaperone HslO;protein_id=HBQ7388298.1;transl_table=11 DAFVNP010000002.1 tpg gene 23997 25706 . - . ID=gene-L8R42_000158;Name=L8R42_000158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000158 DAFVNP010000002.1 Protein Homology CDS 23997 25706 . - 0 ID=cds-HBQ7388299.1;Parent=gene-L8R42_000158;Dbxref=NCBI_GP:HBQ7388299.1;Name=HBQ7388299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=L8R42_000158;product=DUF4153 domain-containing protein;protein_id=HBQ7388299.1;transl_table=11 DAFVNP010000002.1 tpg gene 26086 27705 . + . ID=gene-L8R42_000159;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=L8R42_000159 DAFVNP010000002.1 Protein Homology CDS 26086 27705 . + 0 ID=cds-HBQ7388300.1;Parent=gene-L8R42_000159;Dbxref=NCBI_GP:HBQ7388300.1;Name=HBQ7388300.1;gbkey=CDS;gene=pckA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=L8R42_000159;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=HBQ7388300.1;transl_table=11 DAFVNP010000002.1 tpg gene 27780 29132 . - . ID=gene-L8R42_000160;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=L8R42_000160 DAFVNP010000002.1 Protein Homology CDS 27780 29132 . - 0 ID=cds-HBQ7388301.1;Parent=gene-L8R42_000160;Dbxref=NCBI_GP:HBQ7388301.1;Name=HBQ7388301.1;gbkey=CDS;gene=envZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=L8R42_000160;product=two-component system sensor histidine kinase EnvZ;protein_id=HBQ7388301.1;transl_table=11 DAFVNP010000002.1 tpg gene 29129 29848 . - . ID=gene-L8R42_000161;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=L8R42_000161 DAFVNP010000002.1 Protein Homology CDS 29129 29848 . - 0 ID=cds-HBQ7388302.1;Parent=gene-L8R42_000161;Dbxref=NCBI_GP:HBQ7388302.1;Name=HBQ7388302.1;gbkey=CDS;gene=ompR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=L8R42_000161;product=two-component system response regulator OmpR;protein_id=HBQ7388302.1;transl_table=11 DAFVNP010000002.1 tpg gene 30074 30547 . + . ID=gene-L8R42_000162;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=L8R42_000162 DAFVNP010000002.1 Protein Homology CDS 30074 30547 . + 0 ID=cds-HBQ7388303.1;Parent=gene-L8R42_000162;Dbxref=NCBI_GP:HBQ7388303.1;Name=HBQ7388303.1;gbkey=CDS;gene=greB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=L8R42_000162;product=transcription elongation factor GreB;protein_id=HBQ7388303.1;transl_table=11 DAFVNP010000002.1 tpg gene 30646 32976 . + . ID=gene-L8R42_000163;Name=L8R42_000163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000163 DAFVNP010000002.1 Protein Homology CDS 30646 32976 . + 0 ID=cds-HBQ7388304.1;Parent=gene-L8R42_000163;Dbxref=NCBI_GP:HBQ7388304.1;Name=HBQ7388304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=L8R42_000163;product=RNA-binding transcriptional accessory protein;protein_id=HBQ7388304.1;transl_table=11 DAFVNP010000002.1 tpg gene 33413 33640 . + . ID=gene-L8R42_000164;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=L8R42_000164 DAFVNP010000002.1 Protein Homology CDS 33413 33640 . + 0 ID=cds-HBQ7388305.1;Parent=gene-L8R42_000164;Dbxref=NCBI_GP:HBQ7388305.1;Name=HBQ7388305.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=L8R42_000164;product=ferrous iron transporter A;protein_id=HBQ7388305.1;transl_table=11 DAFVNP010000002.1 tpg gene 33659 35977 . + . ID=gene-L8R42_000165;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=L8R42_000165 DAFVNP010000002.1 Protein Homology CDS 33659 35977 . + 0 ID=cds-HBQ7388306.1;Parent=gene-L8R42_000165;Dbxref=NCBI_GP:HBQ7388306.1;Name=HBQ7388306.1;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=L8R42_000165;product=Fe(2+) transporter permease subunit FeoB;protein_id=HBQ7388306.1;transl_table=11 DAFVNP010000002.1 tpg gene 35990 36226 . + . ID=gene-L8R42_000166;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=L8R42_000166 DAFVNP010000002.1 Protein Homology CDS 35990 36226 . + 0 ID=cds-HBQ7388307.1;Parent=gene-L8R42_000166;Dbxref=NCBI_GP:HBQ7388307.1;Name=HBQ7388307.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=L8R42_000166;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=HBQ7388307.1;transl_table=11 DAFVNP010000002.1 tpg gene 36461 37387 . + . ID=gene-L8R42_000167;Name=L8R42_000167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000167 DAFVNP010000002.1 Protein Homology CDS 36461 37387 . + 0 ID=cds-HBQ7388308.1;Parent=gene-L8R42_000167;Dbxref=NCBI_GP:HBQ7388308.1;Name=HBQ7388308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=L8R42_000167;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HBQ7388308.1;transl_table=11 DAFVNP010000002.1 tpg gene 37423 38193 . - . ID=gene-L8R42_000168;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=L8R42_000168 DAFVNP010000002.1 Protein Homology CDS 37423 38193 . - 0 ID=cds-HBQ7388309.1;Parent=gene-L8R42_000168;Dbxref=NCBI_GP:HBQ7388309.1;Name=HBQ7388309.1;gbkey=CDS;gene=bioH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=L8R42_000168;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=HBQ7388309.1;transl_table=11 DAFVNP010000002.1 tpg gene 38231 38914 . + . ID=gene-L8R42_000169;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=L8R42_000169 DAFVNP010000002.1 Protein Homology CDS 38231 38914 . + 0 ID=cds-HBQ7388310.1;Parent=gene-L8R42_000169;Dbxref=NCBI_GP:HBQ7388310.1;Name=HBQ7388310.1;gbkey=CDS;gene=gntX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=L8R42_000169;product=DNA utilization protein GntX;protein_id=HBQ7388310.1;transl_table=11 DAFVNP010000002.1 tpg gene 38973 39548 . + . ID=gene-L8R42_000170;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=L8R42_000170 DAFVNP010000002.1 Protein Homology CDS 38973 39548 . + 0 ID=cds-HBQ7388311.1;Parent=gene-L8R42_000170;Dbxref=NCBI_GP:HBQ7388311.1;Name=HBQ7388311.1;gbkey=CDS;gene=nfuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=L8R42_000170;product=Fe-S biogenesis protein NfuA;protein_id=HBQ7388311.1;transl_table=11 DAFVNP010000002.1 tpg gene 39925 41241 . + . ID=gene-L8R42_000171;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=L8R42_000171 DAFVNP010000002.1 Protein Homology CDS 39925 41241 . + 0 ID=cds-HBQ7388312.1;Parent=gene-L8R42_000171;Dbxref=NCBI_GP:HBQ7388312.1;Name=HBQ7388312.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=L8R42_000171;product=gluconate transporter;protein_id=HBQ7388312.1;transl_table=11 DAFVNP010000002.1 tpg gene 41360 43438 . - . ID=gene-L8R42_000172;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=L8R42_000172 DAFVNP010000002.1 Protein Homology CDS 41360 43438 . - 0 ID=cds-HBQ7388313.1;Parent=gene-L8R42_000172;Dbxref=NCBI_GP:HBQ7388313.1;Name=HBQ7388313.1;gbkey=CDS;gene=malQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=L8R42_000172;product=4-alpha-glucanotransferase;protein_id=HBQ7388313.1;transl_table=11 DAFVNP010000002.1 tpg gene 43448 45841 . - . ID=gene-L8R42_000173;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=L8R42_000173 DAFVNP010000002.1 Protein Homology CDS 43448 45841 . - 0 ID=cds-HBQ7388314.1;Parent=gene-L8R42_000173;Dbxref=NCBI_GP:HBQ7388314.1;Name=HBQ7388314.1;gbkey=CDS;gene=malP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=L8R42_000173;product=maltodextrin phosphorylase;protein_id=HBQ7388314.1;transl_table=11 DAFVNP010000002.1 tpg gene 46436 49141 . + . ID=gene-L8R42_000174;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=L8R42_000174 DAFVNP010000002.1 Protein Homology CDS 46436 49141 . + 0 ID=cds-HBQ7388315.1;Parent=gene-L8R42_000174;Dbxref=NCBI_GP:HBQ7388315.1;Name=HBQ7388315.1;gbkey=CDS;gene=malT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=L8R42_000174;product=HTH-type transcriptional regulator MalT;protein_id=HBQ7388315.1;transl_table=11 DAFVNP010000002.1 tpg gene 49256 49816 . - . ID=gene-L8R42_000175;Name=L8R42_000175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000175 DAFVNP010000002.1 Protein Homology CDS 49256 49816 . - 0 ID=cds-HBQ7388316.1;Parent=gene-L8R42_000175;Dbxref=NCBI_GP:HBQ7388316.1;Name=HBQ7388316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=L8R42_000175;product=hypothetical protein;protein_id=HBQ7388316.1;transl_table=11 DAFVNP010000002.1 tpg gene 49813 50847 . - . ID=gene-L8R42_000176;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=L8R42_000176 DAFVNP010000002.1 Protein Homology CDS 49813 50847 . - 0 ID=cds-HBQ7388317.1;Parent=gene-L8R42_000176;Dbxref=NCBI_GP:HBQ7388317.1;Name=HBQ7388317.1;gbkey=CDS;gene=rtcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=L8R42_000176;product=RNA 3'-terminal phosphate cyclase;protein_id=HBQ7388317.1;transl_table=11 DAFVNP010000002.1 tpg gene 50851 52065 . - . ID=gene-L8R42_000177;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=L8R42_000177 DAFVNP010000002.1 Protein Homology CDS 50851 52065 . - 0 ID=cds-HBQ7388318.1;Parent=gene-L8R42_000177;Dbxref=NCBI_GP:HBQ7388318.1;Name=HBQ7388318.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=L8R42_000177;product=RNA-splicing ligase RtcB;protein_id=HBQ7388318.1;transl_table=11 DAFVNP010000002.1 tpg gene 52417 53970 . - . ID=gene-L8R42_000178;Name=L8R42_000178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000178 DAFVNP010000002.1 Protein Homology CDS 52417 53970 . - 0 ID=cds-HBQ7388319.1;Parent=gene-L8R42_000178;Dbxref=NCBI_GP:HBQ7388319.1;Name=HBQ7388319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=L8R42_000178;product=TROVE domain-containing protein;protein_id=HBQ7388319.1;transl_table=11 DAFVNP010000002.1 tpg gene 54159 55742 . + . ID=gene-L8R42_000179;Name=L8R42_000179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000179 DAFVNP010000002.1 Protein Homology CDS 54159 55742 . + 0 ID=cds-HBQ7388320.1;Parent=gene-L8R42_000179;Dbxref=NCBI_GP:HBQ7388320.1;Name=HBQ7388320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=L8R42_000179;product=sigma 54-dependent transcriptional regulator;protein_id=HBQ7388320.1;transl_table=11 DAFVNP010000002.1 tpg gene 55739 56497 . - . ID=gene-L8R42_000180;Name=L8R42_000180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000180 DAFVNP010000002.1 Protein Homology CDS 55739 56497 . - 0 ID=cds-HBQ7388321.1;Parent=gene-L8R42_000180;Dbxref=NCBI_GP:HBQ7388321.1;Name=HBQ7388321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=L8R42_000180;product=DeoR/GlpR family transcriptional regulator;protein_id=HBQ7388321.1;transl_table=11 DAFVNP010000002.1 tpg gene 56591 57421 . - . ID=gene-L8R42_000181;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=L8R42_000181 DAFVNP010000002.1 Protein Homology CDS 56591 57421 . - 0 ID=cds-HBQ7388322.1;Parent=gene-L8R42_000181;Dbxref=NCBI_GP:HBQ7388322.1;Name=HBQ7388322.1;gbkey=CDS;gene=glpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=L8R42_000181;product=rhomboid family intramembrane serine protease GlpG;protein_id=HBQ7388322.1;transl_table=11 DAFVNP010000002.1 tpg gene 57497 57823 . - . ID=gene-L8R42_000182;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=L8R42_000182 DAFVNP010000002.1 Protein Homology CDS 57497 57823 . - 0 ID=cds-HBQ7388323.1;Parent=gene-L8R42_000182;Dbxref=NCBI_GP:HBQ7388323.1;Name=HBQ7388323.1;gbkey=CDS;gene=glpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=L8R42_000182;product=thiosulfate sulfurtransferase GlpE;protein_id=HBQ7388323.1;transl_table=11 DAFVNP010000002.1 tpg gene 58022 59530 . + . ID=gene-L8R42_000183;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=L8R42_000183 DAFVNP010000002.1 Protein Homology CDS 58022 59530 . + 0 ID=cds-HBQ7388324.1;Parent=gene-L8R42_000183;Dbxref=NCBI_GP:HBQ7388324.1;Name=HBQ7388324.1;gbkey=CDS;gene=glpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=L8R42_000183;product=glycerol-3-phosphate dehydrogenase;protein_id=HBQ7388324.1;transl_table=11 DAFVNP010000002.1 tpg gene 59577 60122 . - . ID=gene-L8R42_000184;Name=L8R42_000184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000184 DAFVNP010000002.1 Protein Homology CDS 59577 60122 . - 0 ID=cds-HBQ7388325.1;Parent=gene-L8R42_000184;Dbxref=NCBI_GP:HBQ7388325.1;Name=HBQ7388325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=L8R42_000184;product=hypothetical protein;protein_id=HBQ7388325.1;transl_table=11 DAFVNP010000002.1 tpg gene 60132 61685 . - . ID=gene-L8R42_000185;Name=L8R42_000185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000185 DAFVNP010000002.1 Protein Homology CDS 60132 61685 . - 0 ID=cds-HBQ7388326.1;Parent=gene-L8R42_000185;Dbxref=NCBI_GP:HBQ7388326.1;Name=HBQ7388326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541033.1;locus_tag=L8R42_000185;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=HBQ7388326.1;transl_table=11 DAFVNP010000002.1 tpg gene 61786 62895 . - . ID=gene-L8R42_000186;Name=L8R42_000186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000186 DAFVNP010000002.1 Protein Homology CDS 61786 62895 . - 0 ID=cds-HBQ7388327.1;Parent=gene-L8R42_000186;Dbxref=NCBI_GP:HBQ7388327.1;Name=HBQ7388327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=L8R42_000186;product=glycerol dehydrogenase;protein_id=HBQ7388327.1;transl_table=11 DAFVNP010000002.1 tpg gene 63233 64567 . + . ID=gene-L8R42_000187;Name=L8R42_000187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000187 DAFVNP010000002.1 Protein Homology CDS 63233 64567 . + 0 ID=cds-HBQ7388328.1;Parent=gene-L8R42_000187;Dbxref=NCBI_GP:HBQ7388328.1;Name=HBQ7388328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=L8R42_000187;product=MFS transporter;protein_id=HBQ7388328.1;transl_table=11 DAFVNP010000002.1 tpg gene 64564 66279 . + . ID=gene-L8R42_000188;Name=L8R42_000188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000188 DAFVNP010000002.1 Protein Homology CDS 64564 66279 . + 0 ID=cds-HBQ7388329.1;Parent=gene-L8R42_000188;Dbxref=NCBI_GP:HBQ7388329.1;Name=HBQ7388329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=L8R42_000188;product=dihydroxy-acid dehydratase;protein_id=HBQ7388329.1;transl_table=11 DAFVNP010000002.1 tpg gene 66323 67228 . + . ID=gene-L8R42_000189;Name=L8R42_000189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000189 DAFVNP010000002.1 Protein Homology CDS 66323 67228 . + 0 ID=cds-HBQ7388330.1;Parent=gene-L8R42_000189;Dbxref=NCBI_GP:HBQ7388330.1;Name=HBQ7388330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=L8R42_000189;product=dihydrodipicolinate synthase family protein;protein_id=HBQ7388330.1;transl_table=11 DAFVNP010000002.1 tpg gene 67272 68027 . - . ID=gene-L8R42_000190;Name=L8R42_000190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000190 DAFVNP010000002.1 Protein Homology CDS 67272 68027 . - 0 ID=cds-HBQ7388331.1;Parent=gene-L8R42_000190;Dbxref=NCBI_GP:HBQ7388331.1;Name=HBQ7388331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=L8R42_000190;product=IclR family transcriptional regulator;protein_id=HBQ7388331.1;transl_table=11 DAFVNP010000002.1 tpg gene 68205 70652 . - . ID=gene-L8R42_000191;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=L8R42_000191 DAFVNP010000002.1 Protein Homology CDS 68205 70652 . - 0 ID=cds-HBQ7388332.1;Parent=gene-L8R42_000191;Dbxref=NCBI_GP:HBQ7388332.1;Name=HBQ7388332.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=L8R42_000191;product=glycogen phosphorylase;protein_id=HBQ7388332.1;transl_table=11 DAFVNP010000002.1 tpg gene 70672 72105 . - . ID=gene-L8R42_000192;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=L8R42_000192 DAFVNP010000002.1 Protein Homology CDS 70672 72105 . - 0 ID=cds-HBQ7388333.1;Parent=gene-L8R42_000192;Dbxref=NCBI_GP:HBQ7388333.1;Name=HBQ7388333.1;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=L8R42_000192;product=glycogen synthase GlgA;protein_id=HBQ7388333.1;transl_table=11 DAFVNP010000002.1 tpg gene 72105 73400 . - . ID=gene-L8R42_000193;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=L8R42_000193 DAFVNP010000002.1 Protein Homology CDS 72105 73400 . - 0 ID=cds-HBQ7388334.1;Parent=gene-L8R42_000193;Dbxref=NCBI_GP:HBQ7388334.1;Name=HBQ7388334.1;gbkey=CDS;gene=glgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=L8R42_000193;product=glucose-1-phosphate adenylyltransferase;protein_id=HBQ7388334.1;transl_table=11 DAFVNP010000002.1 tpg gene 73415 75391 . - . ID=gene-L8R42_000194;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=L8R42_000194 DAFVNP010000002.1 Protein Homology CDS 73415 75391 . - 0 ID=cds-HBQ7388335.1;Parent=gene-L8R42_000194;Dbxref=NCBI_GP:HBQ7388335.1;Name=HBQ7388335.1;gbkey=CDS;gene=glgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=L8R42_000194;product=glycogen debranching protein GlgX;protein_id=HBQ7388335.1;transl_table=11 DAFVNP010000002.1 tpg gene 75388 77574 . - . ID=gene-L8R42_000195;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=L8R42_000195 DAFVNP010000002.1 Protein Homology CDS 75388 77574 . - 0 ID=cds-HBQ7388336.1;Parent=gene-L8R42_000195;Dbxref=NCBI_GP:HBQ7388336.1;Name=HBQ7388336.1;gbkey=CDS;gene=glgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=L8R42_000195;product=1%2C4-alpha-glucan branching enzyme;protein_id=HBQ7388336.1;transl_table=11 DAFVNP010000002.1 tpg gene 77922 79028 . - . ID=gene-L8R42_000196;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=L8R42_000196 DAFVNP010000002.1 Protein Homology CDS 77922 79028 . - 0 ID=cds-HBQ7388337.1;Parent=gene-L8R42_000196;Dbxref=NCBI_GP:HBQ7388337.1;Name=HBQ7388337.1;gbkey=CDS;gene=asd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=L8R42_000196;product=aspartate-semialdehyde dehydrogenase;protein_id=HBQ7388337.1;transl_table=11 DAFVNP010000002.1 tpg pseudogene 79155 79529 . + . ID=gene-L8R42_000197;Name=L8R42_000197;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_000197;pseudo=true DAFVNP010000002.1 Protein Homology CDS 79155 79529 . + 0 ID=cds-L8R42_000197;Parent=gene-L8R42_000197;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=L8R42_000197;product=MarC family protein;pseudo=true;transl_table=11 DAFVNP010000002.1 tpg gene 79452 80792 . - . ID=gene-L8R42_000198;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=L8R42_000198 DAFVNP010000002.1 Protein Homology CDS 79452 80792 . - 0 ID=cds-HBQ7388338.1;Parent=gene-L8R42_000198;Dbxref=NCBI_GP:HBQ7388338.1;Name=HBQ7388338.1;gbkey=CDS;gene=gntU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=L8R42_000198;product=gluconate transporter;protein_id=HBQ7388338.1;transl_table=11 DAFVNP010000002.1 tpg gene 80789 81322 . - . ID=gene-L8R42_000199;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=L8R42_000199 DAFVNP010000002.1 Protein Homology CDS 80789 81322 . - 0 ID=cds-HBQ7388339.1;Parent=gene-L8R42_000199;Dbxref=NCBI_GP:HBQ7388339.1;Name=HBQ7388339.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=L8R42_000199;product=gluconokinase;protein_id=HBQ7388339.1;transl_table=11 DAFVNP010000002.1 tpg gene 81461 82456 . - . ID=gene-L8R42_000200;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=L8R42_000200 DAFVNP010000002.1 Protein Homology CDS 81461 82456 . - 0 ID=cds-HBQ7388340.1;Parent=gene-L8R42_000200;Dbxref=NCBI_GP:HBQ7388340.1;Name=HBQ7388340.1;gbkey=CDS;gene=gntR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=L8R42_000200;product=gluconate operon transcriptional repressor GntR;protein_id=HBQ7388340.1;transl_table=11 DAFVNP010000002.1 tpg gene 82827 83528 . - . ID=gene-L8R42_000201;Name=L8R42_000201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000201 DAFVNP010000002.1 Protein Homology CDS 82827 83528 . - 0 ID=cds-HBQ7388341.1;Parent=gene-L8R42_000201;Dbxref=NCBI_GP:HBQ7388341.1;Name=HBQ7388341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=L8R42_000201;product=pirin family protein;protein_id=HBQ7388341.1;transl_table=11 DAFVNP010000002.1 tpg gene 83652 84689 . - . ID=gene-L8R42_000202;Name=L8R42_000202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000202 DAFVNP010000002.1 Protein Homology CDS 83652 84689 . - 0 ID=cds-HBQ7388342.1;Parent=gene-L8R42_000202;Dbxref=NCBI_GP:HBQ7388342.1;Name=HBQ7388342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=L8R42_000202;product=oxidoreductase;protein_id=HBQ7388342.1;transl_table=11 DAFVNP010000002.1 tpg gene 85160 85648 . + . ID=gene-L8R42_000203;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=L8R42_000203 DAFVNP010000002.1 Protein Homology CDS 85160 85648 . + 0 ID=cds-HBQ7388343.1;Parent=gene-L8R42_000203;Dbxref=NCBI_GP:HBQ7388343.1;Name=HBQ7388343.1;gbkey=CDS;gene=yhhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=L8R42_000203;product=N-acetyltransferase;protein_id=HBQ7388343.1;transl_table=11 DAFVNP010000002.1 tpg gene 85913 87127 . + . ID=gene-L8R42_000204;Name=L8R42_000204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000204 DAFVNP010000002.1 Protein Homology CDS 85913 87127 . + 0 ID=cds-HBQ7388344.1;Parent=gene-L8R42_000204;Dbxref=NCBI_GP:HBQ7388344.1;Name=HBQ7388344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=L8R42_000204;product=DeoR family transcriptional regulator;protein_id=HBQ7388344.1;transl_table=11 DAFVNP010000002.1 tpg gene 87143 87904 . + . ID=gene-L8R42_000205;Name=L8R42_000205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000205 DAFVNP010000002.1 Protein Homology CDS 87143 87904 . + 0 ID=cds-HBQ7388345.1;Parent=gene-L8R42_000205;Dbxref=NCBI_GP:HBQ7388345.1;Name=HBQ7388345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=L8R42_000205;product=cytoplasmic protein;protein_id=HBQ7388345.1;transl_table=11 DAFVNP010000002.1 tpg gene 87958 88929 . + . ID=gene-L8R42_000206;Name=L8R42_000206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000206 DAFVNP010000002.1 Protein Homology CDS 87958 88929 . + 0 ID=cds-HBQ7388346.1;Parent=gene-L8R42_000206;Dbxref=NCBI_GP:HBQ7388346.1;Name=HBQ7388346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=L8R42_000206;product=DMT family transporter;protein_id=HBQ7388346.1;transl_table=11 DAFVNP010000002.1 tpg gene 88926 89960 . + . ID=gene-L8R42_000207;Name=L8R42_000207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000207 DAFVNP010000002.1 Protein Homology CDS 88926 89960 . + 0 ID=cds-HBQ7388347.1;Parent=gene-L8R42_000207;Dbxref=NCBI_GP:HBQ7388347.1;Name=HBQ7388347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=L8R42_000207;product=phosphotriesterase;protein_id=HBQ7388347.1;transl_table=11 DAFVNP010000002.1 tpg gene 90005 91747 . - . ID=gene-L8R42_000208;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=L8R42_000208 DAFVNP010000002.1 Protein Homology CDS 90005 91747 . - 0 ID=cds-HBQ7388348.1;Parent=gene-L8R42_000208;Dbxref=NCBI_GP:HBQ7388348.1;Name=HBQ7388348.1;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=L8R42_000208;product=gamma-glutamyltransferase;protein_id=HBQ7388348.1;transl_table=11 DAFVNP010000002.1 tpg gene 91873 92289 . + . ID=gene-L8R42_000209;Name=L8R42_000209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000209 DAFVNP010000002.1 Protein Homology CDS 91873 92289 . + 0 ID=cds-HBQ7388349.1;Parent=gene-L8R42_000209;Dbxref=NCBI_GP:HBQ7388349.1;Name=HBQ7388349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=L8R42_000209;product=DUF2756 family protein;protein_id=HBQ7388349.1;transl_table=11 DAFVNP010000002.1 tpg gene 92286 93026 . - . ID=gene-L8R42_000210;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=L8R42_000210 DAFVNP010000002.1 Protein Homology CDS 92286 93026 . - 0 ID=cds-HBQ7388350.1;Parent=gene-L8R42_000210;Dbxref=NCBI_GP:HBQ7388350.1;Name=HBQ7388350.1;gbkey=CDS;gene=ugpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=L8R42_000210;product=glycerophosphodiester phosphodiesterase;protein_id=HBQ7388350.1;transl_table=11 DAFVNP010000002.1 tpg gene 93023 94093 . - . ID=gene-L8R42_000211;Name=L8R42_000211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000211 DAFVNP010000002.1 Protein Homology CDS 93023 94093 . - 0 ID=cds-HBQ7388351.1;Parent=gene-L8R42_000211;Dbxref=NCBI_GP:HBQ7388351.1;Name=HBQ7388351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=L8R42_000211;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=HBQ7388351.1;transl_table=11 DAFVNP010000002.1 tpg gene 94095 94940 . - . ID=gene-L8R42_000212;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=L8R42_000212 DAFVNP010000002.1 Protein Homology CDS 94095 94940 . - 0 ID=cds-HBQ7388352.1;Parent=gene-L8R42_000212;Dbxref=NCBI_GP:HBQ7388352.1;Name=HBQ7388352.1;gbkey=CDS;gene=ugpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=L8R42_000212;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=HBQ7388352.1;transl_table=11 DAFVNP010000002.1 tpg gene 94937 95824 . - . ID=gene-L8R42_000213;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=L8R42_000213 DAFVNP010000002.1 Protein Homology CDS 94937 95824 . - 0 ID=cds-HBQ7388353.1;Parent=gene-L8R42_000213;Dbxref=NCBI_GP:HBQ7388353.1;Name=HBQ7388353.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=L8R42_000213;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=HBQ7388353.1;transl_table=11 DAFVNP010000002.1 tpg gene 95929 97245 . - . ID=gene-L8R42_000214;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=L8R42_000214 DAFVNP010000002.1 Protein Homology CDS 95929 97245 . - 0 ID=cds-HBQ7388354.1;Parent=gene-L8R42_000214;Dbxref=NCBI_GP:HBQ7388354.1;Name=HBQ7388354.1;gbkey=CDS;gene=ugpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=L8R42_000214;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=HBQ7388354.1;transl_table=11 DAFVNP010000002.1 tpg gene 97478 97756 . - . ID=gene-L8R42_000215;Name=L8R42_000215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000215 DAFVNP010000002.1 Protein Homology CDS 97478 97756 . - 0 ID=cds-HBQ7388355.1;Parent=gene-L8R42_000215;Dbxref=NCBI_GP:HBQ7388355.1;Name=HBQ7388355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=L8R42_000215;product=hypothetical protein;protein_id=HBQ7388355.1;transl_table=11 DAFVNP010000002.1 tpg gene 97920 98633 . - . ID=gene-L8R42_000216;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=L8R42_000216 DAFVNP010000002.1 Protein Homology CDS 97920 98633 . - 0 ID=cds-HBQ7388356.1;Parent=gene-L8R42_000216;Dbxref=NCBI_GP:HBQ7388356.1;Name=HBQ7388356.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=L8R42_000216;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=HBQ7388356.1;transl_table=11 DAFVNP010000002.1 tpg gene 98635 99402 . - . ID=gene-L8R42_000217;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=L8R42_000217 DAFVNP010000002.1 Protein Homology CDS 98635 99402 . - 0 ID=cds-HBQ7388357.1;Parent=gene-L8R42_000217;Dbxref=NCBI_GP:HBQ7388357.1;Name=HBQ7388357.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=L8R42_000217;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=HBQ7388357.1;transl_table=11 DAFVNP010000002.1 tpg gene 99399 100676 . - . ID=gene-L8R42_000218;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=L8R42_000218 DAFVNP010000002.1 Protein Homology CDS 99399 100676 . - 0 ID=cds-HBQ7388358.1;Parent=gene-L8R42_000218;Dbxref=NCBI_GP:HBQ7388358.1;Name=HBQ7388358.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=L8R42_000218;product=branched chain amino acid ABC transporter permease LivM;protein_id=HBQ7388358.1;transl_table=11 DAFVNP010000002.1 tpg gene 100673 101599 . - . ID=gene-L8R42_000219;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=L8R42_000219 DAFVNP010000002.1 Protein Homology CDS 100673 101599 . - 0 ID=cds-HBQ7388359.1;Parent=gene-L8R42_000219;Dbxref=NCBI_GP:HBQ7388359.1;Name=HBQ7388359.1;gbkey=CDS;gene=livH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=L8R42_000219;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=HBQ7388359.1;transl_table=11 DAFVNP010000002.1 tpg gene 101659 102768 . - . ID=gene-L8R42_000220;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=L8R42_000220 DAFVNP010000002.1 Protein Homology CDS 101659 102768 . - 0 ID=cds-HBQ7388360.1;Parent=gene-L8R42_000220;Dbxref=NCBI_GP:HBQ7388360.1;Name=HBQ7388360.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=L8R42_000220;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=HBQ7388360.1;transl_table=11 DAFVNP010000002.1 tpg gene 103190 103573 . + . ID=gene-L8R42_000221;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=L8R42_000221 DAFVNP010000002.1 Protein Homology CDS 103190 103573 . + 0 ID=cds-HBQ7388361.1;Parent=gene-L8R42_000221;Dbxref=NCBI_GP:HBQ7388361.1;Name=HBQ7388361.1;gbkey=CDS;gene=panM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=L8R42_000221;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=HBQ7388361.1;transl_table=11 DAFVNP010000002.1 tpg gene 103570 104088 . - . ID=gene-L8R42_000222;Name=L8R42_000222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000222 DAFVNP010000002.1 Protein Homology CDS 103570 104088 . - 0 ID=cds-HBQ7388362.1;Parent=gene-L8R42_000222;Dbxref=NCBI_GP:HBQ7388362.1;Name=HBQ7388362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369560.1;locus_tag=L8R42_000222;product=GNAT family N-acetyltransferase;protein_id=HBQ7388362.1;transl_table=11 DAFVNP010000002.1 tpg gene 104092 104361 . - . ID=gene-L8R42_000223;Name=L8R42_000223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000223 DAFVNP010000002.1 Protein Homology CDS 104092 104361 . - 0 ID=cds-HBQ7388363.1;Parent=gene-L8R42_000223;Dbxref=NCBI_GP:HBQ7388363.1;Name=HBQ7388363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303459.1;locus_tag=L8R42_000223;product=DUF1778 domain-containing protein;protein_id=HBQ7388363.1;transl_table=11 DAFVNP010000002.1 tpg gene 104539 105642 . - . ID=gene-L8R42_000224;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=L8R42_000224 DAFVNP010000002.1 Protein Homology CDS 104539 105642 . - 0 ID=cds-HBQ7388364.1;Parent=gene-L8R42_000224;Dbxref=NCBI_GP:HBQ7388364.1;Name=HBQ7388364.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=L8R42_000224;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=HBQ7388364.1;transl_table=11 DAFVNP010000002.1 tpg gene 105964 106818 . - . ID=gene-L8R42_000225;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=L8R42_000225 DAFVNP010000002.1 Protein Homology CDS 105964 106818 . - 0 ID=cds-HBQ7388365.1;Parent=gene-L8R42_000225;Dbxref=NCBI_GP:HBQ7388365.1;Name=HBQ7388365.1;gbkey=CDS;gene=rpoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=L8R42_000225;product=RNA polymerase sigma factor RpoH;protein_id=HBQ7388365.1;transl_table=11 DAFVNP010000002.1 tpg gene 107064 108119 . - . ID=gene-L8R42_000226;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=L8R42_000226 DAFVNP010000002.1 Protein Homology CDS 107064 108119 . - 0 ID=cds-HBQ7388366.1;Parent=gene-L8R42_000226;Dbxref=NCBI_GP:HBQ7388366.1;Name=HBQ7388366.1;gbkey=CDS;gene=ftsX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=L8R42_000226;product=cell division protein FtsX;protein_id=HBQ7388366.1;transl_table=11 DAFVNP010000002.1 tpg gene 108112 108780 . - . ID=gene-L8R42_000227;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=L8R42_000227 DAFVNP010000002.1 Protein Homology CDS 108112 108780 . - 0 ID=cds-HBQ7388367.1;Parent=gene-L8R42_000227;Dbxref=NCBI_GP:HBQ7388367.1;Name=HBQ7388367.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=L8R42_000227;product=cell division ATP-binding protein FtsE;protein_id=HBQ7388367.1;transl_table=11 DAFVNP010000002.1 tpg gene 108783 110258 . - . ID=gene-L8R42_000228;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=L8R42_000228 DAFVNP010000002.1 Protein Homology CDS 108783 110258 . - 0 ID=cds-HBQ7388368.1;Parent=gene-L8R42_000228;Dbxref=NCBI_GP:HBQ7388368.1;Name=HBQ7388368.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=L8R42_000228;product=signal recognition particle-docking protein FtsY;protein_id=HBQ7388368.1;transl_table=11 DAFVNP010000002.1 tpg gene 110384 110980 . + . ID=gene-L8R42_000229;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=L8R42_000229 DAFVNP010000002.1 Protein Homology CDS 110384 110980 . + 0 ID=cds-HBQ7388369.1;Parent=gene-L8R42_000229;Dbxref=NCBI_GP:HBQ7388369.1;Name=HBQ7388369.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=L8R42_000229;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=HBQ7388369.1;transl_table=11 DAFVNP010000002.1 tpg gene 110970 111239 . + . ID=gene-L8R42_000230;Name=L8R42_000230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000230 DAFVNP010000002.1 Protein Homology CDS 110970 111239 . + 0 ID=cds-HBQ7388370.1;Parent=gene-L8R42_000230;Dbxref=NCBI_GP:HBQ7388370.1;Name=HBQ7388370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=L8R42_000230;product=DUF1145 family protein;protein_id=HBQ7388370.1;transl_table=11 DAFVNP010000002.1 tpg gene 111261 111632 . - . ID=gene-L8R42_000231;Name=L8R42_000231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000231 DAFVNP010000002.1 Protein Homology CDS 111261 111632 . - 0 ID=cds-HBQ7388371.1;Parent=gene-L8R42_000231;Dbxref=NCBI_GP:HBQ7388371.1;Name=HBQ7388371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=L8R42_000231;product=DUF2500 domain-containing protein;protein_id=HBQ7388371.1;transl_table=11 DAFVNP010000002.1 tpg gene 111774 112400 . + . ID=gene-L8R42_000232;Name=L8R42_000232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000232 DAFVNP010000002.1 Protein Homology CDS 111774 112400 . + 0 ID=cds-HBQ7388372.1;Parent=gene-L8R42_000232;Dbxref=NCBI_GP:HBQ7388372.1;Name=HBQ7388372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=L8R42_000232;product=lysoplasmalogenase;protein_id=HBQ7388372.1;transl_table=11 DAFVNP010000002.1 tpg gene 112481 114679 . + . ID=gene-L8R42_000233;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=L8R42_000233 DAFVNP010000002.1 Protein Homology CDS 112481 114679 . + 0 ID=cds-HBQ7388373.1;Parent=gene-L8R42_000233;Dbxref=NCBI_GP:HBQ7388373.1;Name=HBQ7388373.1;gbkey=CDS;gene=zntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=L8R42_000233;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=HBQ7388373.1;transl_table=11 DAFVNP010000002.1 tpg gene 114879 116522 . + . ID=gene-L8R42_000234;Name=L8R42_000234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000234 DAFVNP010000002.1 Protein Homology CDS 114879 116522 . + 0 ID=cds-HBQ7388374.1;Parent=gene-L8R42_000234;Dbxref=NCBI_GP:HBQ7388374.1;Name=HBQ7388374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=L8R42_000234;product=methyl-accepting chemotaxis citrate transducer;protein_id=HBQ7388374.1;transl_table=11 DAFVNP010000002.1 tpg gene 116546 116791 . - . ID=gene-L8R42_000235;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=L8R42_000235 DAFVNP010000002.1 Protein Homology CDS 116546 116791 . - 0 ID=cds-HBQ7388375.1;Parent=gene-L8R42_000235;Dbxref=NCBI_GP:HBQ7388375.1;Name=HBQ7388375.1;gbkey=CDS;gene=tusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=L8R42_000235;product=sulfurtransferase TusA;protein_id=HBQ7388375.1;transl_table=11 DAFVNP010000002.1 tpg gene 116961 117626 . + . ID=gene-L8R42_000236;Name=L8R42_000236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000236 DAFVNP010000002.1 Protein Homology CDS 116961 117626 . + 0 ID=cds-HBQ7388376.1;Parent=gene-L8R42_000236;Dbxref=NCBI_GP:HBQ7388376.1;Name=HBQ7388376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=L8R42_000236;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=HBQ7388376.1;transl_table=11 DAFVNP010000002.1 tpg gene 117699 118256 . + . ID=gene-L8R42_000237;Name=L8R42_000237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000237 DAFVNP010000002.1 Protein Homology CDS 117699 118256 . + 0 ID=cds-HBQ7388377.1;Parent=gene-L8R42_000237;Dbxref=NCBI_GP:HBQ7388377.1;Name=HBQ7388377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=L8R42_000237;product=DcrB family lipoprotein;protein_id=HBQ7388377.1;transl_table=11 DAFVNP010000002.1 tpg gene 118260 119519 . - . ID=gene-L8R42_000238;Name=L8R42_000238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000238 DAFVNP010000002.1 Protein Homology CDS 118260 119519 . - 0 ID=cds-HBQ7388378.1;Parent=gene-L8R42_000238;Dbxref=NCBI_GP:HBQ7388378.1;Name=HBQ7388378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=L8R42_000238;product=MFS transporter;protein_id=HBQ7388378.1;transl_table=11 DAFVNP010000002.1 tpg gene 119609 120658 . + . ID=gene-L8R42_000239;Name=L8R42_000239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000239 DAFVNP010000002.1 Protein Homology CDS 119609 120658 . + 0 ID=cds-HBQ7388379.1;Parent=gene-L8R42_000239;Dbxref=NCBI_GP:HBQ7388379.1;Name=HBQ7388379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=L8R42_000239;product=AI-2E family transporter;protein_id=HBQ7388379.1;transl_table=11 DAFVNP010000002.1 tpg gene 120710 121288 . + . ID=gene-L8R42_000240;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=L8R42_000240 DAFVNP010000002.1 Protein Homology CDS 120710 121288 . + 0 ID=cds-HBQ7388380.1;Parent=gene-L8R42_000240;Dbxref=NCBI_GP:HBQ7388380.1;Name=HBQ7388380.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=L8R42_000240;product=4'-phosphopantetheinyl transferase AcpT;protein_id=HBQ7388380.1;transl_table=11 DAFVNP010000002.1 tpg gene 121380 121781 . + . ID=gene-L8R42_000241;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=L8R42_000241 DAFVNP010000002.1 Protein Homology CDS 121380 121781 . + 0 ID=cds-HBQ7388381.1;Parent=gene-L8R42_000241;Dbxref=NCBI_GP:HBQ7388381.1;Name=HBQ7388381.1;gbkey=CDS;gene=nikR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=L8R42_000241;product=nickel-responsive transcriptional regulator NikR;protein_id=HBQ7388381.1;transl_table=11 DAFVNP010000002.1 tpg gene 121884 123008 . - . ID=gene-L8R42_000242;Name=L8R42_000242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000242 DAFVNP010000002.1 Protein Homology CDS 121884 123008 . - 0 ID=cds-HBQ7388382.1;Parent=gene-L8R42_000242;Dbxref=NCBI_GP:HBQ7388382.1;Name=HBQ7388382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=L8R42_000242;product=ABC transporter permease;protein_id=HBQ7388382.1;transl_table=11 DAFVNP010000002.1 tpg gene 123008 125749 . - . ID=gene-L8R42_000243;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=L8R42_000243 DAFVNP010000002.1 Protein Homology CDS 123008 125749 . - 0 ID=cds-HBQ7388383.1;Parent=gene-L8R42_000243;Dbxref=NCBI_GP:HBQ7388383.1;Name=HBQ7388383.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=L8R42_000243;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=HBQ7388383.1;transl_table=11 DAFVNP010000002.1 tpg gene 125746 126813 . - . ID=gene-L8R42_000244;Name=L8R42_000244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000244 DAFVNP010000002.1 Protein Homology CDS 125746 126813 . - 0 ID=cds-HBQ7388384.1;Parent=gene-L8R42_000244;Dbxref=NCBI_GP:HBQ7388384.1;Name=HBQ7388384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=L8R42_000244;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=HBQ7388384.1;transl_table=11 DAFVNP010000002.1 tpg gene 127119 128315 . - . ID=gene-L8R42_000245;Name=L8R42_000245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000245 DAFVNP010000002.1 Protein Homology CDS 127119 128315 . - 0 ID=cds-HBQ7388385.1;Parent=gene-L8R42_000245;Dbxref=NCBI_GP:HBQ7388385.1;Name=HBQ7388385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=L8R42_000245;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=HBQ7388385.1;transl_table=11 DAFVNP010000002.1 tpg gene 128546 130042 . + . ID=gene-L8R42_000246;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=L8R42_000246 DAFVNP010000002.1 Protein Homology CDS 128546 130042 . + 0 ID=cds-HBQ7388386.1;Parent=gene-L8R42_000246;Dbxref=NCBI_GP:HBQ7388386.1;Name=HBQ7388386.1;gbkey=CDS;gene=pitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=L8R42_000246;product=inorganic phosphate transporter PitA;protein_id=HBQ7388386.1;transl_table=11 DAFVNP010000002.1 tpg gene 130182 130517 . - . ID=gene-L8R42_000247;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=L8R42_000247 DAFVNP010000002.1 Protein Homology CDS 130182 130517 . - 0 ID=cds-HBQ7388387.1;Parent=gene-L8R42_000247;Dbxref=NCBI_GP:HBQ7388387.1;Name=HBQ7388387.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=L8R42_000247;product=universal stress protein UspB;protein_id=HBQ7388387.1;transl_table=11 DAFVNP010000002.1 tpg gene 130905 131339 . + . ID=gene-L8R42_000248;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=L8R42_000248 DAFVNP010000002.1 Protein Homology CDS 130905 131339 . + 0 ID=cds-HBQ7388388.1;Parent=gene-L8R42_000248;Dbxref=NCBI_GP:HBQ7388388.1;Name=HBQ7388388.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=L8R42_000248;product=universal stress protein UspA;protein_id=HBQ7388388.1;transl_table=11 DAFVNP010000002.1 tpg pseudogene 131664 133136 . + . ID=gene-L8R42_000249;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=pseudogene;locus_tag=L8R42_000249;pseudo=true DAFVNP010000002.1 Protein Homology CDS 131664 133136 . + 0 ID=cds-L8R42_000249;Parent=gene-L8R42_000249;Note=internal stop;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=L8R42_000249;product=dipeptide/tripeptide permease DtpB;pseudo=true;transl_table=11 DAFVNP010000002.1 tpg gene 133228 133986 . - . ID=gene-L8R42_000250;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=L8R42_000250 DAFVNP010000002.1 Protein Homology CDS 133228 133986 . - 0 ID=cds-HBQ7388389.1;Parent=gene-L8R42_000250;Dbxref=NCBI_GP:HBQ7388389.1;Name=HBQ7388389.1;gbkey=CDS;gene=rsmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=L8R42_000250;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=HBQ7388389.1;transl_table=11 DAFVNP010000002.1 tpg gene 133993 136035 . - . ID=gene-L8R42_000251;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=L8R42_000251 DAFVNP010000002.1 Protein Homology CDS 133993 136035 . - 0 ID=cds-HBQ7388390.1;Parent=gene-L8R42_000251;Dbxref=NCBI_GP:HBQ7388390.1;Name=HBQ7388390.1;gbkey=CDS;gene=prlC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=L8R42_000251;product=oligopeptidase A;protein_id=HBQ7388390.1;transl_table=11 DAFVNP010000002.1 tpg gene 136198 136851 . - . ID=gene-L8R42_000252;Name=L8R42_000252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000252 DAFVNP010000002.1 Protein Homology CDS 136198 136851 . - 0 ID=cds-HBQ7388391.1;Parent=gene-L8R42_000252;Dbxref=NCBI_GP:HBQ7388391.1;Name=HBQ7388391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469196.1;locus_tag=L8R42_000252;product=hypothetical protein;protein_id=HBQ7388391.1;transl_table=11 DAFVNP010000002.1 tpg gene 137129 137572 . + . ID=gene-L8R42_000253;Name=L8R42_000253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000253 DAFVNP010000002.1 Protein Homology CDS 137129 137572 . + 0 ID=cds-HBQ7388392.1;Parent=gene-L8R42_000253;Dbxref=NCBI_GP:HBQ7388392.1;Name=HBQ7388392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209569.1;locus_tag=L8R42_000253;product=hypothetical protein;protein_id=HBQ7388392.1;transl_table=11 DAFVNP010000002.1 tpg gene 137693 138535 . + . ID=gene-L8R42_000254;Name=L8R42_000254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000254 DAFVNP010000002.1 Protein Homology CDS 137693 138535 . + 0 ID=cds-HBQ7388393.1;Parent=gene-L8R42_000254;Dbxref=NCBI_GP:HBQ7388393.1;Name=HBQ7388393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=L8R42_000254;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=HBQ7388393.1;transl_table=11 DAFVNP010000002.1 tpg gene 138640 139992 . + . ID=gene-L8R42_000255;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=L8R42_000255 DAFVNP010000002.1 Protein Homology CDS 138640 139992 . + 0 ID=cds-HBQ7388394.1;Parent=gene-L8R42_000255;Dbxref=NCBI_GP:HBQ7388394.1;Name=HBQ7388394.1;gbkey=CDS;gene=gorA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=L8R42_000255;product=glutathione-disulfide reductase;protein_id=HBQ7388394.1;transl_table=11 DAFVNP010000002.1 tpg pseudogene 140136 140243 . - . ID=gene-L8R42_000256;Name=L8R42_000256;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_000256;pseudo=true DAFVNP010000002.1 Protein Homology CDS 140136 140243 . - 0 ID=cds-L8R42_000256;Parent=gene-L8R42_000256;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090243.1;locus_tag=L8R42_000256;product=asparaginase;pseudo=true;transl_table=11 DAFVNP010000002.1 tpg pseudogene 140389 140763 . - . ID=gene-L8R42_000257;Name=L8R42_000257;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_000257;pseudo=true DAFVNP010000002.1 Protein Homology CDS 140389 140763 . - 0 ID=cds-L8R42_000257;Parent=gene-L8R42_000257;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=L8R42_000257;product=asparaginase;pseudo=true;transl_table=11 DAFVNP010000002.1 tpg gene 140822 142141 . - . ID=gene-L8R42_000258;Name=L8R42_000258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000258 DAFVNP010000002.1 Protein Homology CDS 140822 142141 . - 0 ID=cds-HBQ7388395.1;Parent=gene-L8R42_000258;Dbxref=NCBI_GP:HBQ7388395.1;Name=HBQ7388395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=L8R42_000258;product=anaerobic C4-dicarboxylate transporter;protein_id=HBQ7388395.1;transl_table=11 DAFVNP010000002.1 tpg gene 142195 143040 . - . ID=gene-L8R42_000259;Name=L8R42_000259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000259 DAFVNP010000002.1 Protein Homology CDS 142195 143040 . - 0 ID=cds-HBQ7388396.1;Parent=gene-L8R42_000259;Dbxref=NCBI_GP:HBQ7388396.1;Name=HBQ7388396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=L8R42_000259;product=fructoselysine 6-kinase;protein_id=HBQ7388396.1;transl_table=11 DAFVNP010000002.1 tpg gene 143104 144081 . - . ID=gene-L8R42_000260;Name=L8R42_000260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000260 DAFVNP010000002.1 Protein Homology CDS 143104 144081 . - 0 ID=cds-HBQ7388397.1;Parent=gene-L8R42_000260;Dbxref=NCBI_GP:HBQ7388397.1;Name=HBQ7388397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=L8R42_000260;product=SIS domain-containing protein;protein_id=HBQ7388397.1;transl_table=11 ##sequence-region DAFVNP010000003.1 1 101188 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000003.1 tpg region 1 101188 . + . ID=DAFVNP010000003.1:1..101188;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000003.1 tpg gene 120 707 . + . ID=gene-L8R42_000261;Name=L8R42_000261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000261 DAFVNP010000003.1 Protein Homology CDS 120 707 . + 0 ID=cds-HBQ7388398.1;Parent=gene-L8R42_000261;Dbxref=NCBI_GP:HBQ7388398.1;Name=HBQ7388398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000491822.1;locus_tag=L8R42_000261;product=hypothetical protein;protein_id=HBQ7388398.1;transl_table=11 DAFVNP010000003.1 tpg gene 1172 3592 . + . ID=gene-L8R42_000262;Name=L8R42_000262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000262 DAFVNP010000003.1 Protein Homology CDS 1172 3592 . + 0 ID=cds-HBQ7388399.1;Parent=gene-L8R42_000262;Dbxref=NCBI_GP:HBQ7388399.1;Name=HBQ7388399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681217.1;locus_tag=L8R42_000262;product=DUF4165 domain-containing protein;protein_id=HBQ7388399.1;transl_table=11 DAFVNP010000003.1 tpg gene 5590 6678 . - . ID=gene-L8R42_000263;Name=repHI2;gbkey=Gene;gene=repHI2;gene_biotype=protein_coding;locus_tag=L8R42_000263 DAFVNP010000003.1 Protein Homology CDS 5590 6678 . - 0 ID=cds-HBQ7388400.1;Parent=gene-L8R42_000263;Dbxref=NCBI_GP:HBQ7388400.1;Name=HBQ7388400.1;gbkey=CDS;gene=repHI2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159528.1;locus_tag=L8R42_000263;product=IncHI-type plasmid replication initiator protein RepHI2;protein_id=HBQ7388400.1;transl_table=11 DAFVNP010000003.1 tpg gene 7786 10242 . - . ID=gene-L8R42_000264;Name=L8R42_000264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000264 DAFVNP010000003.1 Protein Homology CDS 7786 10242 . - 0 ID=cds-HBQ7388401.1;Parent=gene-L8R42_000264;Dbxref=NCBI_GP:HBQ7388401.1;Name=HBQ7388401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572417.1;locus_tag=L8R42_000264;product=DUF4165 domain-containing protein;protein_id=HBQ7388401.1;transl_table=11 DAFVNP010000003.1 tpg gene 10615 11241 . + . ID=gene-L8R42_000265;Name=L8R42_000265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000265 DAFVNP010000003.1 Protein Homology CDS 10615 11241 . + 0 ID=cds-HBQ7388402.1;Parent=gene-L8R42_000265;Dbxref=NCBI_GP:HBQ7388402.1;Name=HBQ7388402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966518.1;locus_tag=L8R42_000265;product=hypothetical protein;protein_id=HBQ7388402.1;transl_table=11 DAFVNP010000003.1 tpg gene 11299 11580 . - . ID=gene-L8R42_000266;Name=L8R42_000266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000266 DAFVNP010000003.1 Protein Homology CDS 11299 11580 . - 0 ID=cds-HBQ7388403.1;Parent=gene-L8R42_000266;Dbxref=NCBI_GP:HBQ7388403.1;Name=HBQ7388403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000535423.1;locus_tag=L8R42_000266;product=hypothetical protein;protein_id=HBQ7388403.1;transl_table=11 DAFVNP010000003.1 tpg gene 11561 12022 . - . ID=gene-L8R42_000267;Name=L8R42_000267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000267 DAFVNP010000003.1 Protein Homology CDS 11561 12022 . - 0 ID=cds-HBQ7388404.1;Parent=gene-L8R42_000267;Dbxref=NCBI_GP:HBQ7388404.1;Name=HBQ7388404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502495.1;locus_tag=L8R42_000267;product=hypothetical protein;protein_id=HBQ7388404.1;transl_table=11 DAFVNP010000003.1 tpg gene 12071 12247 . - . ID=gene-L8R42_000268;Name=L8R42_000268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000268 DAFVNP010000003.1 Protein Homology CDS 12071 12247 . - 0 ID=cds-HBQ7388405.1;Parent=gene-L8R42_000268;Dbxref=NCBI_GP:HBQ7388405.1;Name=HBQ7388405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000070863.1;locus_tag=L8R42_000268;product=hypothetical protein;protein_id=HBQ7388405.1;transl_table=11 DAFVNP010000003.1 tpg gene 12244 13935 . - . ID=gene-L8R42_000269;Name=L8R42_000269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000269 DAFVNP010000003.1 Protein Homology CDS 12244 13935 . - 0 ID=cds-HBQ7388406.1;Parent=gene-L8R42_000269;Dbxref=NCBI_GP:HBQ7388406.1;Name=HBQ7388406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096324.1;locus_tag=L8R42_000269;product=DUF4942 domain-containing protein;protein_id=HBQ7388406.1;transl_table=11 DAFVNP010000003.1 tpg gene 14183 15346 . - . ID=gene-L8R42_000270;Name=L8R42_000270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000270 DAFVNP010000003.1 Protein Homology CDS 14183 15346 . - 0 ID=cds-HBQ7388407.1;Parent=gene-L8R42_000270;Dbxref=NCBI_GP:HBQ7388407.1;Name=HBQ7388407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114860.1;locus_tag=L8R42_000270;product=DNA-binding protein;protein_id=HBQ7388407.1;transl_table=11 DAFVNP010000003.1 tpg gene 15715 16527 . + . ID=gene-L8R42_000271;Name=L8R42_000271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000271 DAFVNP010000003.1 Protein Homology CDS 15715 16527 . + 0 ID=cds-HBQ7388408.1;Parent=gene-L8R42_000271;Dbxref=NCBI_GP:HBQ7388408.1;Name=HBQ7388408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121575.1;locus_tag=L8R42_000271;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=HBQ7388408.1;transl_table=11 DAFVNP010000003.1 tpg gene 16536 17390 . - . ID=gene-L8R42_000272;Name=L8R42_000272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000272 DAFVNP010000003.1 Protein Homology CDS 16536 17390 . - 0 ID=cds-HBQ7388409.1;Parent=gene-L8R42_000272;Dbxref=NCBI_GP:HBQ7388409.1;Name=HBQ7388409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000970401.1;locus_tag=L8R42_000272;product=hypothetical protein;protein_id=HBQ7388409.1;transl_table=11 DAFVNP010000003.1 tpg gene 17625 18341 . - . ID=gene-L8R42_000273;Name=L8R42_000273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000273 DAFVNP010000003.1 Protein Homology CDS 17625 18341 . - 0 ID=cds-HBQ7388410.1;Parent=gene-L8R42_000273;Dbxref=NCBI_GP:HBQ7388410.1;Name=HBQ7388410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838218.1;locus_tag=L8R42_000273;product=zinc finger-like domain-containing protein;protein_id=HBQ7388410.1;transl_table=11 DAFVNP010000003.1 tpg gene 18338 18538 . - . ID=gene-L8R42_000274;Name=L8R42_000274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000274 DAFVNP010000003.1 Protein Homology CDS 18338 18538 . - 0 ID=cds-HBQ7388411.1;Parent=gene-L8R42_000274;Dbxref=NCBI_GP:HBQ7388411.1;Name=HBQ7388411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594931.1;locus_tag=L8R42_000274;product=hypothetical protein;protein_id=HBQ7388411.1;transl_table=11 DAFVNP010000003.1 tpg gene 18556 19611 . - . ID=gene-L8R42_000275;Name=L8R42_000275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000275 DAFVNP010000003.1 Protein Homology CDS 18556 19611 . - 0 ID=cds-HBQ7388412.1;Parent=gene-L8R42_000275;Dbxref=NCBI_GP:HBQ7388412.1;Name=HBQ7388412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065779.1;locus_tag=L8R42_000275;product=hypothetical protein;protein_id=HBQ7388412.1;transl_table=11 DAFVNP010000003.1 tpg gene 20088 20963 . + . ID=gene-L8R42_000276;Name=L8R42_000276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000276 DAFVNP010000003.1 Protein Homology CDS 20088 20963 . + 0 ID=cds-HBQ7388413.1;Parent=gene-L8R42_000276;Dbxref=NCBI_GP:HBQ7388413.1;Name=HBQ7388413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594613.1;locus_tag=L8R42_000276;product=RepB family plasmid replication initiator protein;protein_id=HBQ7388413.1;transl_table=11 DAFVNP010000003.1 tpg gene 22112 22465 . + . ID=gene-L8R42_000277;Name=L8R42_000277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000277 DAFVNP010000003.1 Protein Homology CDS 22112 22465 . + 0 ID=cds-HBQ7388414.1;Parent=gene-L8R42_000277;Dbxref=NCBI_GP:HBQ7388414.1;Name=HBQ7388414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000423602.1;locus_tag=L8R42_000277;product=pili assembly chaperone;protein_id=HBQ7388414.1;transl_table=11 DAFVNP010000003.1 tpg gene 22483 22833 . + . ID=gene-L8R42_000278;Name=L8R42_000278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000278 DAFVNP010000003.1 Protein Homology CDS 22483 22833 . + 0 ID=cds-HBQ7388415.1;Parent=gene-L8R42_000278;Dbxref=NCBI_GP:HBQ7388415.1;Name=HBQ7388415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006609.1;locus_tag=L8R42_000278;product=plasmid transfer protein;protein_id=HBQ7388415.1;transl_table=11 DAFVNP010000003.1 tpg gene 22845 23633 . + . ID=gene-L8R42_000279;Name=L8R42_000279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000279 DAFVNP010000003.1 Protein Homology CDS 22845 23633 . + 0 ID=cds-HBQ7388416.1;Parent=gene-L8R42_000279;Dbxref=NCBI_GP:HBQ7388416.1;Name=HBQ7388416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783153.1;locus_tag=L8R42_000279;product=pilus assembly protein;protein_id=HBQ7388416.1;transl_table=11 DAFVNP010000003.1 tpg gene 23633 24904 . + . ID=gene-L8R42_000280;Name=L8R42_000280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000280 DAFVNP010000003.1 Protein Homology CDS 23633 24904 . + 0 ID=cds-HBQ7388417.1;Parent=gene-L8R42_000280;Dbxref=NCBI_GP:HBQ7388417.1;Name=HBQ7388417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592092.1;locus_tag=L8R42_000280;product=type-F conjugative transfer system secretin TraK;protein_id=HBQ7388417.1;transl_table=11 DAFVNP010000003.1 tpg gene 24906 25367 . + . ID=gene-L8R42_000281;Name=L8R42_000281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000281 DAFVNP010000003.1 Protein Homology CDS 24906 25367 . + 0 ID=cds-HBQ7388418.1;Parent=gene-L8R42_000281;Dbxref=NCBI_GP:HBQ7388418.1;Name=HBQ7388418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521242.1;locus_tag=L8R42_000281;product=hypothetical protein;protein_id=HBQ7388418.1;transl_table=11 DAFVNP010000003.1 tpg gene 25357 26712 . + . ID=gene-L8R42_000282;Name=trhB;gbkey=Gene;gene=trhB;gene_biotype=protein_coding;locus_tag=L8R42_000282 DAFVNP010000003.1 Protein Homology CDS 25357 26712 . + 0 ID=cds-HBQ7388419.1;Parent=gene-L8R42_000282;Dbxref=NCBI_GP:HBQ7388419.1;Name=HBQ7388419.1;gbkey=CDS;gene=trhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000351840.1;locus_tag=L8R42_000282;product=IncHI-type conjugal transfer protein TrhB;protein_id=HBQ7388419.1;transl_table=11 DAFVNP010000003.1 tpg gene 26780 27202 . + . ID=gene-L8R42_000283;Name=L8R42_000283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000283 DAFVNP010000003.1 Protein Homology CDS 26780 27202 . + 0 ID=cds-HBQ7388420.1;Parent=gene-L8R42_000283;Dbxref=NCBI_GP:HBQ7388420.1;Name=HBQ7388420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251250.1;locus_tag=L8R42_000283;product=transcriptional regulator;protein_id=HBQ7388420.1;transl_table=11 DAFVNP010000003.1 tpg gene 27321 28073 . + . ID=gene-L8R42_000284;Name=htdT;gbkey=Gene;gene=htdT;gene_biotype=protein_coding;locus_tag=L8R42_000284 DAFVNP010000003.1 Protein Homology CDS 27321 28073 . + 0 ID=cds-HBQ7388421.1;Parent=gene-L8R42_000284;Dbxref=NCBI_GP:HBQ7388421.1;Name=HBQ7388421.1;gbkey=CDS;gene=htdT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892304.1;locus_tag=L8R42_000284;product=protein-disulfide isomerase HtdT;protein_id=HBQ7388421.1;transl_table=11 DAFVNP010000003.1 tpg gene 28083 29033 . + . ID=gene-L8R42_000285;Name=trhV;gbkey=Gene;gene=trhV;gene_biotype=protein_coding;locus_tag=L8R42_000285 DAFVNP010000003.1 Protein Homology CDS 28083 29033 . + 0 ID=cds-HBQ7388422.1;Parent=gene-L8R42_000285;Dbxref=NCBI_GP:HBQ7388422.1;Name=HBQ7388422.1;gbkey=CDS;gene=trhV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022588.1;locus_tag=L8R42_000285;product=IncHI-type conjugal transfer lipoprotein TrhV;protein_id=HBQ7388422.1;transl_table=11 DAFVNP010000003.1 tpg gene 29042 31723 . + . ID=gene-L8R42_000286;Name=L8R42_000286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000286 DAFVNP010000003.1 Protein Homology CDS 29042 31723 . + 0 ID=cds-HBQ7388423.1;Parent=gene-L8R42_000286;Dbxref=NCBI_GP:HBQ7388423.1;Name=HBQ7388423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001255540.1;locus_tag=L8R42_000286;product=TraC family protein;protein_id=HBQ7388423.1;transl_table=11 DAFVNP010000003.1 tpg gene 35062 36315 . + . ID=gene-L8R42_000287;Name=L8R42_000287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000287 DAFVNP010000003.1 Protein Homology CDS 35062 36315 . + 0 ID=cds-HBQ7388424.1;Parent=gene-L8R42_000287;Dbxref=NCBI_GP:HBQ7388424.1;Name=HBQ7388424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050364.1;locus_tag=L8R42_000287;product=ParA family protein;protein_id=HBQ7388424.1;transl_table=11 DAFVNP010000003.1 tpg gene 36312 37316 . + . ID=gene-L8R42_000288;Name=L8R42_000288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000288 DAFVNP010000003.1 Protein Homology CDS 36312 37316 . + 0 ID=cds-HBQ7388425.1;Parent=gene-L8R42_000288;Dbxref=NCBI_GP:HBQ7388425.1;Name=HBQ7388425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278836.1;locus_tag=L8R42_000288;product=ParB N-terminal domain-containing protein;protein_id=HBQ7388425.1;transl_table=11 DAFVNP010000003.1 tpg gene 37378 37767 . - . ID=gene-L8R42_000289;Name=L8R42_000289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000289 DAFVNP010000003.1 Protein Homology CDS 37378 37767 . - 0 ID=cds-HBQ7388426.1;Parent=gene-L8R42_000289;Dbxref=NCBI_GP:HBQ7388426.1;Name=HBQ7388426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572421.1;locus_tag=L8R42_000289;product=hypothetical protein;protein_id=HBQ7388426.1;transl_table=11 DAFVNP010000003.1 tpg gene 37764 38285 . - . ID=gene-L8R42_000290;Name=L8R42_000290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000290 DAFVNP010000003.1 Protein Homology CDS 37764 38285 . - 0 ID=cds-HBQ7388427.1;Parent=gene-L8R42_000290;Dbxref=NCBI_GP:HBQ7388427.1;Name=HBQ7388427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598517.1;locus_tag=L8R42_000290;product=hypothetical protein;protein_id=HBQ7388427.1;transl_table=11 DAFVNP010000003.1 tpg gene 38278 39114 . - . ID=gene-L8R42_000291;Name=L8R42_000291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000291 DAFVNP010000003.1 Protein Homology CDS 38278 39114 . - 0 ID=cds-HBQ7388428.1;Parent=gene-L8R42_000291;Dbxref=NCBI_GP:HBQ7388428.1;Name=HBQ7388428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700976.1;locus_tag=L8R42_000291;product=hypothetical protein;protein_id=HBQ7388428.1;transl_table=11 DAFVNP010000003.1 tpg gene 39111 40058 . - . ID=gene-L8R42_000292;Name=L8R42_000292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000292 DAFVNP010000003.1 Protein Homology CDS 39111 40058 . - 0 ID=cds-HBQ7388429.1;Parent=gene-L8R42_000292;Dbxref=NCBI_GP:HBQ7388429.1;Name=HBQ7388429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000718595.1;locus_tag=L8R42_000292;product=metallophosphoesterase;protein_id=HBQ7388429.1;transl_table=11 DAFVNP010000003.1 tpg gene 40422 41459 . + . ID=gene-L8R42_000293;Name=L8R42_000293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000293 DAFVNP010000003.1 Protein Homology CDS 40422 41459 . + 0 ID=cds-HBQ7388430.1;Parent=gene-L8R42_000293;Dbxref=NCBI_GP:HBQ7388430.1;Name=HBQ7388430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818955.1;locus_tag=L8R42_000293;product=stbA family protein;protein_id=HBQ7388430.1;transl_table=11 DAFVNP010000003.1 tpg gene 41471 42109 . + . ID=gene-L8R42_000294;Name=L8R42_000294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000294 DAFVNP010000003.1 Protein Homology CDS 41471 42109 . + 0 ID=cds-HBQ7388431.1;Parent=gene-L8R42_000294;Dbxref=NCBI_GP:HBQ7388431.1;Name=HBQ7388431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001107538.1;locus_tag=L8R42_000294;product=hypothetical protein;protein_id=HBQ7388431.1;transl_table=11 DAFVNP010000003.1 tpg gene 42513 42965 . + . ID=gene-L8R42_000295;Name=L8R42_000295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000295 DAFVNP010000003.1 Protein Homology CDS 42513 42965 . + 0 ID=cds-HBQ7388432.1;Parent=gene-L8R42_000295;Dbxref=NCBI_GP:HBQ7388432.1;Name=HBQ7388432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952689.1;locus_tag=L8R42_000295;product=transfer repressor;protein_id=HBQ7388432.1;transl_table=11 DAFVNP010000003.1 tpg gene 42955 43380 . + . ID=gene-L8R42_000296;Name=L8R42_000296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000296 DAFVNP010000003.1 Protein Homology CDS 42955 43380 . + 0 ID=cds-HBQ7388433.1;Parent=gene-L8R42_000296;Dbxref=NCBI_GP:HBQ7388433.1;Name=HBQ7388433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000836981.1;locus_tag=L8R42_000296;product=htdF;protein_id=HBQ7388433.1;transl_table=11 DAFVNP010000003.1 tpg gene 43389 43943 . + . ID=gene-L8R42_000297;Name=L8R42_000297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000297 DAFVNP010000003.1 Protein Homology CDS 43389 43943 . + 0 ID=cds-HBQ7388434.1;Parent=gene-L8R42_000297;Dbxref=NCBI_GP:HBQ7388434.1;Name=HBQ7388434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000235775.1;locus_tag=L8R42_000297;product=plasmid transfer protein;protein_id=HBQ7388434.1;transl_table=11 DAFVNP010000003.1 tpg gene 44063 48367 . + . ID=gene-L8R42_000298;Name=rsp;gbkey=Gene;gene=rsp;gene_biotype=protein_coding;locus_tag=L8R42_000298 DAFVNP010000003.1 Protein Homology CDS 44063 48367 . + 0 ID=cds-HBQ7388435.1;Parent=gene-L8R42_000298;Dbxref=NCBI_GP:HBQ7388435.1;Name=HBQ7388435.1;gbkey=CDS;gene=rsp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232107.1;locus_tag=L8R42_000298;product=IncHI-type conjugal transfer protein RSP;protein_id=HBQ7388435.1;transl_table=11 DAFVNP010000003.1 tpg gene 48645 49157 . + . ID=gene-L8R42_000299;Name=trhF;gbkey=Gene;gene=trhF;gene_biotype=protein_coding;locus_tag=L8R42_000299 DAFVNP010000003.1 Protein Homology CDS 48645 49157 . + 0 ID=cds-HBQ7388436.1;Parent=gene-L8R42_000299;Dbxref=NCBI_GP:HBQ7388436.1;Name=HBQ7388436.1;gbkey=CDS;gene=trhF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209619.1;locus_tag=L8R42_000299;product=IncHI-type conjugal transfer protein TrhF;protein_id=HBQ7388436.1;transl_table=11 DAFVNP010000003.1 tpg gene 49144 50655 . + . ID=gene-L8R42_000300;Name=L8R42_000300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000300 DAFVNP010000003.1 Protein Homology CDS 49144 50655 . + 0 ID=cds-HBQ7388437.1;Parent=gene-L8R42_000300;Dbxref=NCBI_GP:HBQ7388437.1;Name=HBQ7388437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001256132.1;locus_tag=L8R42_000300;product=conjugal transfer protein;protein_id=HBQ7388437.1;transl_table=11 DAFVNP010000003.1 tpg gene 50800 51855 . + . ID=gene-L8R42_000301;Name=trhU;gbkey=Gene;gene=trhU;gene_biotype=protein_coding;locus_tag=L8R42_000301 DAFVNP010000003.1 Protein Homology CDS 50800 51855 . + 0 ID=cds-HBQ7388438.1;Parent=gene-L8R42_000301;Dbxref=NCBI_GP:HBQ7388438.1;Name=HBQ7388438.1;gbkey=CDS;gene=trhU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395465.1;locus_tag=L8R42_000301;product=IncHI-type conjugal transfer protein TrhU;protein_id=HBQ7388438.1;transl_table=11 DAFVNP010000003.1 tpg gene 51874 55062 . + . ID=gene-L8R42_000302;Name=trhN;gbkey=Gene;gene=trhN;gene_biotype=protein_coding;locus_tag=L8R42_000302 DAFVNP010000003.1 Protein Homology CDS 51874 55062 . + 0 ID=cds-HBQ7388439.1;Parent=gene-L8R42_000302;Dbxref=NCBI_GP:HBQ7388439.1;Name=HBQ7388439.1;gbkey=CDS;gene=trhN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682729.1;locus_tag=L8R42_000302;product=IncHI-type conjugal transfer protein TrhN;protein_id=HBQ7388439.1;transl_table=11 DAFVNP010000003.1 tpg gene 55091 55963 . - . ID=gene-L8R42_000303;Name=L8R42_000303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000303 DAFVNP010000003.1 Protein Homology CDS 55091 55963 . - 0 ID=cds-HBQ7388440.1;Parent=gene-L8R42_000303;Dbxref=NCBI_GP:HBQ7388440.1;Name=HBQ7388440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000771832.1;locus_tag=L8R42_000303;product=hypothetical protein;protein_id=HBQ7388440.1;transl_table=11 DAFVNP010000003.1 tpg gene 56143 57927 . + . ID=gene-L8R42_000304;Name=trhI;gbkey=Gene;gene=trhI;gene_biotype=protein_coding;locus_tag=L8R42_000304 DAFVNP010000003.1 Protein Homology CDS 56143 57927 . + 0 ID=cds-HBQ7388441.1;Parent=gene-L8R42_000304;Dbxref=NCBI_GP:HBQ7388441.1;Name=HBQ7388441.1;gbkey=CDS;gene=trhI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517885.1;locus_tag=L8R42_000304;product=IncHI-type conjugal transfer helicase TrhI;protein_id=HBQ7388441.1;transl_table=11 DAFVNP010000003.1 tpg gene 58322 59194 . + . ID=gene-L8R42_000305;Name=L8R42_000305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000305 DAFVNP010000003.1 Protein Homology CDS 58322 59194 . + 0 ID=cds-HBQ7388442.1;Parent=gene-L8R42_000305;Dbxref=NCBI_GP:HBQ7388442.1;Name=HBQ7388442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000041927.1;locus_tag=L8R42_000305;product=hypothetical protein;protein_id=HBQ7388442.1;transl_table=11 DAFVNP010000003.1 tpg gene 59252 59629 . + . ID=gene-L8R42_000306;Name=L8R42_000306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000306 DAFVNP010000003.1 Protein Homology CDS 59252 59629 . + 0 ID=cds-HBQ7388443.1;Parent=gene-L8R42_000306;Dbxref=NCBI_GP:HBQ7388443.1;Name=HBQ7388443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120822.1;locus_tag=L8R42_000306;product=hypothetical protein;protein_id=HBQ7388443.1;transl_table=11 DAFVNP010000003.1 tpg gene 59690 60667 . + . ID=gene-L8R42_000307;Name=L8R42_000307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000307 DAFVNP010000003.1 Protein Homology CDS 59690 60667 . + 0 ID=cds-HBQ7388444.1;Parent=gene-L8R42_000307;Dbxref=NCBI_GP:HBQ7388444.1;Name=HBQ7388444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000810362.1;locus_tag=L8R42_000307;product=hypothetical protein;protein_id=HBQ7388444.1;transl_table=11 DAFVNP010000003.1 tpg gene 60725 61783 . + . ID=gene-L8R42_000308;Name=L8R42_000308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000308 DAFVNP010000003.1 Protein Homology CDS 60725 61783 . + 0 ID=cds-HBQ7388445.1;Parent=gene-L8R42_000308;Dbxref=NCBI_GP:HBQ7388445.1;Name=HBQ7388445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063335.1;locus_tag=L8R42_000308;product=AAA family ATPase;protein_id=HBQ7388445.1;transl_table=11 DAFVNP010000003.1 tpg gene 61915 62088 . + . ID=gene-L8R42_000309;Name=L8R42_000309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000309 DAFVNP010000003.1 Protein Homology CDS 61915 62088 . + 0 ID=cds-HBQ7388446.1;Parent=gene-L8R42_000309;Dbxref=NCBI_GP:HBQ7388446.1;Name=HBQ7388446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176645.1;locus_tag=L8R42_000309;product=hypothetical protein;protein_id=HBQ7388446.1;transl_table=11 DAFVNP010000003.1 tpg gene 62152 63279 . + . ID=gene-L8R42_000310;Name=L8R42_000310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000310 DAFVNP010000003.1 Protein Homology CDS 62152 63279 . + 0 ID=cds-HBQ7388447.1;Parent=gene-L8R42_000310;Dbxref=NCBI_GP:HBQ7388447.1;Name=HBQ7388447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174395.1;locus_tag=L8R42_000310;product=DUF3150 domain-containing protein;protein_id=HBQ7388447.1;transl_table=11 DAFVNP010000003.1 tpg gene 63357 65369 . + . ID=gene-L8R42_000311;Name=L8R42_000311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000311 DAFVNP010000003.1 Protein Homology CDS 63357 65369 . + 0 ID=cds-HBQ7388448.1;Parent=gene-L8R42_000311;Dbxref=NCBI_GP:HBQ7388448.1;Name=HBQ7388448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762697.1;locus_tag=L8R42_000311;product=VWA domain-containing protein;protein_id=HBQ7388448.1;transl_table=11 DAFVNP010000003.1 tpg gene 65441 65662 . + . ID=gene-L8R42_000312;Name=L8R42_000312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000312 DAFVNP010000003.1 Protein Homology CDS 65441 65662 . + 0 ID=cds-HBQ7388449.1;Parent=gene-L8R42_000312;Dbxref=NCBI_GP:HBQ7388449.1;Name=HBQ7388449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192121.1;locus_tag=L8R42_000312;product=hypothetical protein;protein_id=HBQ7388449.1;transl_table=11 DAFVNP010000003.1 tpg gene 65776 67008 . + . ID=gene-L8R42_000313;Name=L8R42_000313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000313 DAFVNP010000003.1 Protein Homology CDS 65776 67008 . + 0 ID=cds-HBQ7388450.1;Parent=gene-L8R42_000313;Dbxref=NCBI_GP:HBQ7388450.1;Name=HBQ7388450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220381.1;locus_tag=L8R42_000313;product=toprim domain-containing protein;protein_id=HBQ7388450.1;transl_table=11 DAFVNP010000003.1 tpg gene 67278 67799 . + . ID=gene-L8R42_000314;Name=L8R42_000314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000314 DAFVNP010000003.1 Protein Homology CDS 67278 67799 . + 0 ID=cds-HBQ7388451.1;Parent=gene-L8R42_000314;Dbxref=NCBI_GP:HBQ7388451.1;Name=HBQ7388451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010933.1;locus_tag=L8R42_000314;product=hypothetical protein;protein_id=HBQ7388451.1;transl_table=11 DAFVNP010000003.1 tpg gene 67878 68756 . + . ID=gene-L8R42_000315;Name=L8R42_000315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000315 DAFVNP010000003.1 Protein Homology CDS 67878 68756 . + 0 ID=cds-HBQ7388452.1;Parent=gene-L8R42_000315;Dbxref=NCBI_GP:HBQ7388452.1;Name=HBQ7388452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762003.1;locus_tag=L8R42_000315;product=hypothetical protein;protein_id=HBQ7388452.1;transl_table=11 DAFVNP010000003.1 tpg gene 68827 69762 . + . ID=gene-L8R42_000316;Name=L8R42_000316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000316 DAFVNP010000003.1 Protein Homology CDS 68827 69762 . + 0 ID=cds-HBQ7388453.1;Parent=gene-L8R42_000316;Dbxref=NCBI_GP:HBQ7388453.1;Name=HBQ7388453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691118.1;locus_tag=L8R42_000316;product=hypothetical protein;protein_id=HBQ7388453.1;transl_table=11 DAFVNP010000003.1 tpg gene 69831 70751 . + . ID=gene-L8R42_000317;Name=L8R42_000317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000317 DAFVNP010000003.1 Protein Homology CDS 69831 70751 . + 0 ID=cds-HBQ7388454.1;Parent=gene-L8R42_000317;Dbxref=NCBI_GP:HBQ7388454.1;Name=HBQ7388454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000991697.1;locus_tag=L8R42_000317;product=hypothetical protein;protein_id=HBQ7388454.1;transl_table=11 DAFVNP010000003.1 tpg gene 70818 71756 . + . ID=gene-L8R42_000318;Name=L8R42_000318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000318 DAFVNP010000003.1 Protein Homology CDS 70818 71756 . + 0 ID=cds-HBQ7388455.1;Parent=gene-L8R42_000318;Dbxref=NCBI_GP:HBQ7388455.1;Name=HBQ7388455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472041.1;locus_tag=L8R42_000318;product=hypothetical protein;protein_id=HBQ7388455.1;transl_table=11 DAFVNP010000003.1 tpg gene 71928 72884 . + . ID=gene-L8R42_000319;Name=L8R42_000319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000319 DAFVNP010000003.1 Protein Homology CDS 71928 72884 . + 0 ID=cds-HBQ7388456.1;Parent=gene-L8R42_000319;Dbxref=NCBI_GP:HBQ7388456.1;Name=HBQ7388456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149831.1;locus_tag=L8R42_000319;product=hypothetical protein;protein_id=HBQ7388456.1;transl_table=11 DAFVNP010000003.1 tpg gene 73148 73423 . + . ID=gene-L8R42_000320;Name=L8R42_000320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000320 DAFVNP010000003.1 Protein Homology CDS 73148 73423 . + 0 ID=cds-HBQ7388457.1;Parent=gene-L8R42_000320;Dbxref=NCBI_GP:HBQ7388457.1;Name=HBQ7388457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001004200.1;locus_tag=L8R42_000320;product=hypothetical protein;protein_id=HBQ7388457.1;transl_table=11 DAFVNP010000003.1 tpg gene 73468 74058 . + . ID=gene-L8R42_000321;Name=L8R42_000321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000321 DAFVNP010000003.1 Protein Homology CDS 73468 74058 . + 0 ID=cds-HBQ7388458.1;Parent=gene-L8R42_000321;Dbxref=NCBI_GP:HBQ7388458.1;Name=HBQ7388458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578892.1;locus_tag=L8R42_000321;product=hypothetical protein;protein_id=HBQ7388458.1;transl_table=11 DAFVNP010000003.1 tpg gene 74066 74323 . + . ID=gene-L8R42_000322;Name=L8R42_000322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000322 DAFVNP010000003.1 Protein Homology CDS 74066 74323 . + 0 ID=cds-HBQ7388459.1;Parent=gene-L8R42_000322;Dbxref=NCBI_GP:HBQ7388459.1;Name=HBQ7388459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001371933.1;locus_tag=L8R42_000322;product=hypothetical protein;protein_id=HBQ7388459.1;transl_table=11 DAFVNP010000003.1 tpg gene 74397 74933 . + . ID=gene-L8R42_000323;Name=L8R42_000323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000323 DAFVNP010000003.1 Protein Homology CDS 74397 74933 . + 0 ID=cds-HBQ7388460.1;Parent=gene-L8R42_000323;Dbxref=NCBI_GP:HBQ7388460.1;Name=HBQ7388460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107168.1;locus_tag=L8R42_000323;product=hypothetical protein;protein_id=HBQ7388460.1;transl_table=11 DAFVNP010000003.1 tpg gene 75013 75396 . + . ID=gene-L8R42_000324;Name=L8R42_000324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000324 DAFVNP010000003.1 Protein Homology CDS 75013 75396 . + 0 ID=cds-HBQ7388461.1;Parent=gene-L8R42_000324;Dbxref=NCBI_GP:HBQ7388461.1;Name=HBQ7388461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001424628.1;locus_tag=L8R42_000324;product=hypothetical protein;protein_id=HBQ7388461.1;transl_table=11 DAFVNP010000003.1 tpg gene 75487 76449 . + . ID=gene-L8R42_000325;Name=L8R42_000325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000325 DAFVNP010000003.1 Protein Homology CDS 75487 76449 . + 0 ID=cds-HBQ7388462.1;Parent=gene-L8R42_000325;Dbxref=NCBI_GP:HBQ7388462.1;Name=HBQ7388462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000119427.1;locus_tag=L8R42_000325;product=DNA replication protein;protein_id=HBQ7388462.1;transl_table=11 DAFVNP010000003.1 tpg gene 76459 77364 . + . ID=gene-L8R42_000326;Name=L8R42_000326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000326 DAFVNP010000003.1 Protein Homology CDS 76459 77364 . + 0 ID=cds-HBQ7388463.1;Parent=gene-L8R42_000326;Dbxref=NCBI_GP:HBQ7388463.1;Name=HBQ7388463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198595.1;locus_tag=L8R42_000326;product=hypothetical protein;protein_id=HBQ7388463.1;transl_table=11 DAFVNP010000003.1 tpg gene 77300 77644 . + . ID=gene-L8R42_000327;Name=L8R42_000327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000327 DAFVNP010000003.1 Protein Homology CDS 77300 77644 . + 0 ID=cds-HBQ7388464.1;Parent=gene-L8R42_000327;Dbxref=NCBI_GP:HBQ7388464.1;Name=HBQ7388464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000418845.1;locus_tag=L8R42_000327;product=hypothetical protein;protein_id=HBQ7388464.1;transl_table=11 DAFVNP010000003.1 tpg gene 77666 78841 . - . ID=gene-L8R42_000328;Name=L8R42_000328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000328 DAFVNP010000003.1 Protein Homology CDS 77666 78841 . - 0 ID=cds-HBQ7388465.1;Parent=gene-L8R42_000328;Dbxref=NCBI_GP:HBQ7388465.1;Name=HBQ7388465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000795947.1;locus_tag=L8R42_000328;product=tyrosine-type recombinase/integrase;protein_id=HBQ7388465.1;transl_table=11 DAFVNP010000003.1 tpg gene 79012 79224 . + . ID=gene-L8R42_000329;Name=L8R42_000329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000329 DAFVNP010000003.1 Protein Homology CDS 79012 79224 . + 0 ID=cds-HBQ7388466.1;Parent=gene-L8R42_000329;Dbxref=NCBI_GP:HBQ7388466.1;Name=HBQ7388466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285422.1;locus_tag=L8R42_000329;product=hypothetical protein;protein_id=HBQ7388466.1;transl_table=11 DAFVNP010000003.1 tpg gene 79585 80667 . + . ID=gene-L8R42_000330;Name=L8R42_000330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000330 DAFVNP010000003.1 Protein Homology CDS 79585 80667 . + 0 ID=cds-HBQ7388467.1;Parent=gene-L8R42_000330;Dbxref=NCBI_GP:HBQ7388467.1;Name=HBQ7388467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232447.1;locus_tag=L8R42_000330;product=hypothetical protein;protein_id=HBQ7388467.1;transl_table=11 DAFVNP010000003.1 tpg gene 80834 82333 . - . ID=gene-L8R42_000331;Name=L8R42_000331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000331 DAFVNP010000003.1 Protein Homology CDS 80834 82333 . - 0 ID=cds-HBQ7388468.1;Parent=gene-L8R42_000331;Dbxref=NCBI_GP:HBQ7388468.1;Name=HBQ7388468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303502.1;locus_tag=L8R42_000331;product=kinase;protein_id=HBQ7388468.1;transl_table=11 DAFVNP010000003.1 tpg gene 82359 83996 . - . ID=gene-L8R42_000332;Name=L8R42_000332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000332 DAFVNP010000003.1 Protein Homology CDS 82359 83996 . - 0 ID=cds-HBQ7388469.1;Parent=gene-L8R42_000332;Dbxref=NCBI_GP:HBQ7388469.1;Name=HBQ7388469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081622.1;locus_tag=L8R42_000332;product=protein phosphatase 2C domain-containing protein;protein_id=HBQ7388469.1;transl_table=11 DAFVNP010000003.1 tpg gene 83996 85036 . - . ID=gene-L8R42_000333;Name=L8R42_000333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000333 DAFVNP010000003.1 Protein Homology CDS 83996 85036 . - 0 ID=cds-HBQ7388470.1;Parent=gene-L8R42_000333;Dbxref=NCBI_GP:HBQ7388470.1;Name=HBQ7388470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253653.1;locus_tag=L8R42_000333;product=VWA domain-containing protein;protein_id=HBQ7388470.1;transl_table=11 DAFVNP010000003.1 tpg gene 85122 85760 . - . ID=gene-L8R42_000334;Name=L8R42_000334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000334 DAFVNP010000003.1 Protein Homology CDS 85122 85760 . - 0 ID=cds-HBQ7388471.1;Parent=gene-L8R42_000334;Dbxref=NCBI_GP:HBQ7388471.1;Name=HBQ7388471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013087240.1;locus_tag=L8R42_000334;product=VWA domain-containing protein;protein_id=HBQ7388471.1;transl_table=11 DAFVNP010000003.1 tpg gene 85760 86401 . - . ID=gene-L8R42_000335;Name=L8R42_000335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000335 DAFVNP010000003.1 Protein Homology CDS 85760 86401 . - 0 ID=cds-HBQ7388472.1;Parent=gene-L8R42_000335;Dbxref=NCBI_GP:HBQ7388472.1;Name=HBQ7388472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210396.1;locus_tag=L8R42_000335;product=TerD family protein;protein_id=HBQ7388472.1;transl_table=11 DAFVNP010000003.1 tpg gene 86424 87062 . - . ID=gene-L8R42_000336;Name=L8R42_000336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000336 DAFVNP010000003.1 Protein Homology CDS 86424 87062 . - 0 ID=cds-HBQ7388473.1;Parent=gene-L8R42_000336;Dbxref=NCBI_GP:HBQ7388473.1;Name=HBQ7388473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015731191.1;locus_tag=L8R42_000336;product=VWA domain-containing protein;protein_id=HBQ7388473.1;transl_table=11 DAFVNP010000003.1 tpg gene 87525 87992 . - . ID=gene-L8R42_000337;Name=terW;gbkey=Gene;gene=terW;gene_biotype=protein_coding;locus_tag=L8R42_000337 DAFVNP010000003.1 Protein Homology CDS 87525 87992 . - 0 ID=cds-HBQ7388474.1;Parent=gene-L8R42_000337;Dbxref=NCBI_GP:HBQ7388474.1;Name=HBQ7388474.1;gbkey=CDS;gene=terW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309370.1;locus_tag=L8R42_000337;product=tellurium resistance protein TerW;protein_id=HBQ7388474.1;transl_table=11 DAFVNP010000003.1 tpg gene 88010 89218 . - . ID=gene-L8R42_000338;Name=L8R42_000338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000338 DAFVNP010000003.1 Protein Homology CDS 88010 89218 . - 0 ID=cds-HBQ7388475.1;Parent=gene-L8R42_000338;Dbxref=NCBI_GP:HBQ7388475.1;Name=HBQ7388475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309371.1;locus_tag=L8R42_000338;product=DUF4236 domain-containing protein;protein_id=HBQ7388475.1;transl_table=11 DAFVNP010000003.1 tpg gene 89229 90185 . - . ID=gene-L8R42_000339;Name=L8R42_000339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000339 DAFVNP010000003.1 Protein Homology CDS 89229 90185 . - 0 ID=cds-HBQ7388476.1;Parent=gene-L8R42_000339;Dbxref=NCBI_GP:HBQ7388476.1;Name=HBQ7388476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309372.1;locus_tag=L8R42_000339;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=HBQ7388476.1;transl_table=11 DAFVNP010000003.1 tpg gene 90185 91264 . - . ID=gene-L8R42_000340;Name=L8R42_000340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000340 DAFVNP010000003.1 Protein Homology CDS 90185 91264 . - 0 ID=cds-HBQ7388477.1;Parent=gene-L8R42_000340;Dbxref=NCBI_GP:HBQ7388477.1;Name=HBQ7388477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309373.2;locus_tag=L8R42_000340;product=cysteine protease StiP family protein;protein_id=HBQ7388477.1;transl_table=11 DAFVNP010000003.1 tpg gene 91266 92039 . - . ID=gene-L8R42_000341;Name=L8R42_000341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000341 DAFVNP010000003.1 Protein Homology CDS 91266 92039 . - 0 ID=cds-HBQ7388478.1;Parent=gene-L8R42_000341;Dbxref=NCBI_GP:HBQ7388478.1;Name=HBQ7388478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309375.1;locus_tag=L8R42_000341;product=hypothetical protein;protein_id=HBQ7388478.1;transl_table=11 DAFVNP010000003.1 tpg gene 92032 93174 . - . ID=gene-L8R42_000342;Name=L8R42_000342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000342 DAFVNP010000003.1 Protein Homology CDS 92032 93174 . - 0 ID=cds-HBQ7388479.1;Parent=gene-L8R42_000342;Dbxref=NCBI_GP:HBQ7388479.1;Name=HBQ7388479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309376.1;locus_tag=L8R42_000342;product=phosphoribosyltransferase domain-containing protein;protein_id=HBQ7388479.1;transl_table=11 DAFVNP010000003.1 tpg gene 93184 94242 . - . ID=gene-L8R42_000343;Name=L8R42_000343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000343 DAFVNP010000003.1 Protein Homology CDS 93184 94242 . - 0 ID=cds-HBQ7388480.1;Parent=gene-L8R42_000343;Dbxref=NCBI_GP:HBQ7388480.1;Name=HBQ7388480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309377.1;locus_tag=L8R42_000343;product=ATP-grasp domain-containing protein;protein_id=HBQ7388480.1;transl_table=11 DAFVNP010000003.1 tpg pseudogene 94566 95146 . + . ID=gene-L8R42_000344;Name=L8R42_000344;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_000344;pseudo=true DAFVNP010000003.1 Protein Homology CDS 94566 95146 . + 0 ID=cds-L8R42_000344;Parent=gene-L8R42_000344;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309378.1;locus_tag=L8R42_000344;product=tellurium resistance TerZ family protein;pseudo=true;transl_table=11 DAFVNP010000003.1 tpg gene 95146 96303 . + . ID=gene-L8R42_000345;Name=L8R42_000345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000345 DAFVNP010000003.1 Protein Homology CDS 95146 96303 . + 0 ID=cds-HBQ7388481.1;Parent=gene-L8R42_000345;Dbxref=NCBI_GP:HBQ7388481.1;Name=HBQ7388481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309379.2;locus_tag=L8R42_000345;product=TerD family protein;protein_id=HBQ7388481.1;transl_table=11 DAFVNP010000003.1 tpg gene 96326 96781 . + . ID=gene-L8R42_000346;Name=L8R42_000346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000346 DAFVNP010000003.1 Protein Homology CDS 96326 96781 . + 0 ID=cds-HBQ7388482.1;Parent=gene-L8R42_000346;Dbxref=NCBI_GP:HBQ7388482.1;Name=HBQ7388482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309380.1;locus_tag=L8R42_000346;product=tellurite resistance TerB family protein;protein_id=HBQ7388482.1;transl_table=11 DAFVNP010000003.1 tpg gene 96804 97844 . + . ID=gene-L8R42_000347;Name=terC;gbkey=Gene;gene=terC;gene_biotype=protein_coding;locus_tag=L8R42_000347 DAFVNP010000003.1 Protein Homology CDS 96804 97844 . + 0 ID=cds-HBQ7388483.1;Parent=gene-L8R42_000347;Dbxref=NCBI_GP:HBQ7388483.1;Name=HBQ7388483.1;gbkey=CDS;gene=terC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309381.1;locus_tag=L8R42_000347;product=tellurium resistance membrane protein TerC;protein_id=HBQ7388483.1;transl_table=11 DAFVNP010000003.1 tpg gene 97893 98471 . + . ID=gene-L8R42_000348;Name=terD;gbkey=Gene;gene=terD;gene_biotype=protein_coding;locus_tag=L8R42_000348 DAFVNP010000003.1 Protein Homology CDS 97893 98471 . + 0 ID=cds-HBQ7388484.1;Parent=gene-L8R42_000348;Dbxref=NCBI_GP:HBQ7388484.1;Name=HBQ7388484.1;gbkey=CDS;gene=terD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309382.1;locus_tag=L8R42_000348;product=tellurium resistance membrane protein TerD;protein_id=HBQ7388484.1;transl_table=11 DAFVNP010000003.1 tpg gene 98539 99114 . + . ID=gene-L8R42_000349;Name=L8R42_000349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000349 DAFVNP010000003.1 Protein Homology CDS 98539 99114 . + 0 ID=cds-HBQ7388485.1;Parent=gene-L8R42_000349;Dbxref=NCBI_GP:HBQ7388485.1;Name=HBQ7388485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309383.1;locus_tag=L8R42_000349;product=TerD family protein;protein_id=HBQ7388485.1;transl_table=11 DAFVNP010000003.1 tpg gene 99543 100784 . + . ID=gene-L8R42_000350;Name=L8R42_000350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000350 DAFVNP010000003.1 Protein Homology CDS 99543 100784 . + 0 ID=cds-HBQ7388486.1;Parent=gene-L8R42_000350;Dbxref=NCBI_GP:HBQ7388486.1;Name=HBQ7388486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001053346.1;locus_tag=L8R42_000350;product=VWA domain-containing protein;protein_id=HBQ7388486.1;transl_table=11 ##sequence-region DAFVNP010000004.1 1 96981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000004.1 tpg region 1 96981 . + . ID=DAFVNP010000004.1:1..96981;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000004.1 tpg gene 387 842 . + . ID=gene-L8R42_000351;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=L8R42_000351 DAFVNP010000004.1 Protein Homology CDS 387 842 . + 0 ID=cds-HBQ7388487.1;Parent=gene-L8R42_000351;Dbxref=NCBI_GP:HBQ7388487.1;Name=HBQ7388487.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=L8R42_000351;product=curlin minor subunit CsgB;protein_id=HBQ7388487.1;transl_table=11 DAFVNP010000004.1 tpg gene 884 1339 . + . ID=gene-L8R42_000352;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=L8R42_000352 DAFVNP010000004.1 Protein Homology CDS 884 1339 . + 0 ID=cds-HBQ7388488.1;Parent=gene-L8R42_000352;Dbxref=NCBI_GP:HBQ7388488.1;Name=HBQ7388488.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=L8R42_000352;product=curlin major subunit CsgA;protein_id=HBQ7388488.1;transl_table=11 DAFVNP010000004.1 tpg gene 1401 1727 . + . ID=gene-L8R42_000353;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=L8R42_000353 DAFVNP010000004.1 Protein Homology CDS 1401 1727 . + 0 ID=cds-HBQ7388489.1;Parent=gene-L8R42_000353;Dbxref=NCBI_GP:HBQ7388489.1;Name=HBQ7388489.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=L8R42_000353;product=curli assembly protein CsgC;protein_id=HBQ7388489.1;transl_table=11 DAFVNP010000004.1 tpg gene 1858 2178 . + . ID=gene-L8R42_000354;Name=L8R42_000354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000354 DAFVNP010000004.1 Protein Homology CDS 1858 2178 . + 0 ID=cds-HBQ7388490.1;Parent=gene-L8R42_000354;Dbxref=NCBI_GP:HBQ7388490.1;Name=HBQ7388490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=L8R42_000354;product=type 1 fimbrial protein;protein_id=HBQ7388490.1;transl_table=11 DAFVNP010000004.1 tpg gene 2265 2804 . + . ID=gene-L8R42_000355;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=L8R42_000355 DAFVNP010000004.1 Protein Homology CDS 2265 2804 . + 0 ID=cds-HBQ7388491.1;Parent=gene-L8R42_000355;Dbxref=NCBI_GP:HBQ7388491.1;Name=HBQ7388491.1;gbkey=CDS;gene=ymdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=L8R42_000355;product=O-acetyl-ADP-ribose deacetylase;protein_id=HBQ7388491.1;transl_table=11 DAFVNP010000004.1 tpg gene 2740 4227 . + . ID=gene-L8R42_000356;Name=L8R42_000356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000356 DAFVNP010000004.1 Protein Homology CDS 2740 4227 . + 0 ID=cds-HBQ7388492.1;Parent=gene-L8R42_000356;Dbxref=NCBI_GP:HBQ7388492.1;Name=HBQ7388492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=L8R42_000356;product=phospholipase D family protein;protein_id=HBQ7388492.1;transl_table=11 DAFVNP010000004.1 tpg gene 4244 5398 . - . ID=gene-L8R42_000357;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=L8R42_000357 DAFVNP010000004.1 Protein Homology CDS 4244 5398 . - 0 ID=cds-HBQ7388493.1;Parent=gene-L8R42_000357;Dbxref=NCBI_GP:HBQ7388493.1;Name=HBQ7388493.1;gbkey=CDS;gene=mdoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=L8R42_000357;product=glucans biosynthesis protein MdoC;protein_id=HBQ7388493.1;transl_table=11 DAFVNP010000004.1 tpg gene 5670 7205 . + . ID=gene-L8R42_000358;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=L8R42_000358 DAFVNP010000004.1 Protein Homology CDS 5670 7205 . + 0 ID=cds-HBQ7388494.1;Parent=gene-L8R42_000358;Dbxref=NCBI_GP:HBQ7388494.1;Name=HBQ7388494.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=L8R42_000358;product=glucans biosynthesis protein MdoG;protein_id=HBQ7388494.1;transl_table=11 DAFVNP010000004.1 tpg gene 7198 9741 . + . ID=gene-L8R42_000359;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=L8R42_000359 DAFVNP010000004.1 Protein Homology CDS 7198 9741 . + 0 ID=cds-HBQ7388495.1;Parent=gene-L8R42_000359;Dbxref=NCBI_GP:HBQ7388495.1;Name=HBQ7388495.1;gbkey=CDS;gene=mdoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=L8R42_000359;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=HBQ7388495.1;transl_table=11 DAFVNP010000004.1 tpg gene 9815 10042 . + . ID=gene-L8R42_000360;Name=L8R42_000360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000360 DAFVNP010000004.1 Protein Homology CDS 9815 10042 . + 0 ID=cds-HBQ7388496.1;Parent=gene-L8R42_000360;Dbxref=NCBI_GP:HBQ7388496.1;Name=HBQ7388496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=L8R42_000360;product=YceK/YidQ family lipoprotein;protein_id=HBQ7388496.1;transl_table=11 DAFVNP010000004.1 tpg gene 10043 10417 . - . ID=gene-L8R42_000361;Name=L8R42_000361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000361 DAFVNP010000004.1 Protein Homology CDS 10043 10417 . - 0 ID=cds-HBQ7388497.1;Parent=gene-L8R42_000361;Dbxref=NCBI_GP:HBQ7388497.1;Name=HBQ7388497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=L8R42_000361;product=secY/secA suppressor protein;protein_id=HBQ7388497.1;transl_table=11 DAFVNP010000004.1 tpg gene 10499 11713 . - . ID=gene-L8R42_000362;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=L8R42_000362 DAFVNP010000004.1 Protein Homology CDS 10499 11713 . - 0 ID=cds-HBQ7388498.1;Parent=gene-L8R42_000362;Dbxref=NCBI_GP:HBQ7388498.1;Name=HBQ7388498.1;gbkey=CDS;gene=mdtG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=L8R42_000362;product=multidrug efflux MFS transporter MdtG;protein_id=HBQ7388498.1;transl_table=11 DAFVNP010000004.1 tpg gene 11868 12788 . - . ID=gene-L8R42_000363;Name=L8R42_000363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000363 DAFVNP010000004.1 Protein Homology CDS 11868 12788 . - 0 ID=cds-HBQ7388499.1;Parent=gene-L8R42_000363;Dbxref=NCBI_GP:HBQ7388499.1;Name=HBQ7388499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=L8R42_000363;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=HBQ7388499.1;transl_table=11 DAFVNP010000004.1 tpg gene 13008 14060 . + . ID=gene-L8R42_000364;Name=L8R42_000364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000364 DAFVNP010000004.1 Protein Homology CDS 13008 14060 . + 0 ID=cds-HBQ7388500.1;Parent=gene-L8R42_000364;Dbxref=NCBI_GP:HBQ7388500.1;Name=HBQ7388500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=L8R42_000364;product=rhodanese-related sulfurtransferase;protein_id=HBQ7388500.1;transl_table=11 DAFVNP010000004.1 tpg gene 14112 14687 . - . ID=gene-L8R42_000365;Name=L8R42_000365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000365 DAFVNP010000004.1 Protein Homology CDS 14112 14687 . - 0 ID=cds-HBQ7388501.1;Parent=gene-L8R42_000365;Dbxref=NCBI_GP:HBQ7388501.1;Name=HBQ7388501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=L8R42_000365;product=YceI family protein;protein_id=HBQ7388501.1;transl_table=11 DAFVNP010000004.1 tpg gene 14684 15256 . - . ID=gene-L8R42_000366;Name=L8R42_000366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000366 DAFVNP010000004.1 Protein Homology CDS 14684 15256 . - 0 ID=cds-HBQ7388502.1;Parent=gene-L8R42_000366;Dbxref=NCBI_GP:HBQ7388502.1;Name=HBQ7388502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=L8R42_000366;product=cytochrome b;protein_id=HBQ7388502.1;transl_table=11 DAFVNP010000004.1 tpg gene 15519 15632 . - . ID=gene-L8R42_000367;Name=L8R42_000367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000367 DAFVNP010000004.1 Protein Homology CDS 15519 15632 . - 0 ID=cds-HBQ7388503.1;Parent=gene-L8R42_000367;Dbxref=NCBI_GP:HBQ7388503.1;Name=HBQ7388503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=L8R42_000367;product=YceO family protein;protein_id=HBQ7388503.1;transl_table=11 DAFVNP010000004.1 tpg gene 15673 16791 . - . ID=gene-L8R42_000368;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=L8R42_000368 DAFVNP010000004.1 Protein Homology CDS 15673 16791 . - 0 ID=cds-HBQ7388504.1;Parent=gene-L8R42_000368;Dbxref=NCBI_GP:HBQ7388504.1;Name=HBQ7388504.1;gbkey=CDS;gene=solA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=L8R42_000368;product=N-methyl-L-tryptophan oxidase;protein_id=HBQ7388504.1;transl_table=11 DAFVNP010000004.1 tpg gene 16904 17158 . - . ID=gene-L8R42_000369;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=L8R42_000369 DAFVNP010000004.1 Protein Homology CDS 16904 17158 . - 0 ID=cds-HBQ7388505.1;Parent=gene-L8R42_000369;Dbxref=NCBI_GP:HBQ7388505.1;Name=HBQ7388505.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=L8R42_000369;product=biofilm formation regulator BssS;protein_id=HBQ7388505.1;transl_table=11 DAFVNP010000004.1 tpg gene 17448 17693 . - . ID=gene-L8R42_000370;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=L8R42_000370 DAFVNP010000004.1 Protein Homology CDS 17448 17693 . - 0 ID=cds-HBQ7388506.1;Parent=gene-L8R42_000370;Dbxref=NCBI_GP:HBQ7388506.1;Name=HBQ7388506.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=L8R42_000370;product=DNA damage-inducible protein I;protein_id=HBQ7388506.1;transl_table=11 DAFVNP010000004.1 tpg gene 17767 18813 . - . ID=gene-L8R42_000371;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=L8R42_000371 DAFVNP010000004.1 Protein Homology CDS 17767 18813 . - 0 ID=cds-HBQ7388507.1;Parent=gene-L8R42_000371;Dbxref=NCBI_GP:HBQ7388507.1;Name=HBQ7388507.1;gbkey=CDS;gene=pyrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=L8R42_000371;product=dihydroorotase;protein_id=HBQ7388507.1;transl_table=11 DAFVNP010000004.1 tpg gene 18916 19476 . - . ID=gene-L8R42_000372;Name=L8R42_000372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000372 DAFVNP010000004.1 Protein Homology CDS 18916 19476 . - 0 ID=cds-HBQ7388508.1;Parent=gene-L8R42_000372;Dbxref=NCBI_GP:HBQ7388508.1;Name=HBQ7388508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=L8R42_000372;product=lipoprotein;protein_id=HBQ7388508.1;transl_table=11 DAFVNP010000004.1 tpg gene 19601 20248 . - . ID=gene-L8R42_000373;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=L8R42_000373 DAFVNP010000004.1 Protein Homology CDS 19601 20248 . - 0 ID=cds-HBQ7388509.1;Parent=gene-L8R42_000373;Dbxref=NCBI_GP:HBQ7388509.1;Name=HBQ7388509.1;gbkey=CDS;gene=grxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=L8R42_000373;product=glutaredoxin 2;protein_id=HBQ7388509.1;transl_table=11 DAFVNP010000004.1 tpg gene 20312 21520 . - . ID=gene-L8R42_000374;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=L8R42_000374 DAFVNP010000004.1 Protein Homology CDS 20312 21520 . - 0 ID=cds-HBQ7388510.1;Parent=gene-L8R42_000374;Dbxref=NCBI_GP:HBQ7388510.1;Name=HBQ7388510.1;gbkey=CDS;gene=mdtH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=L8R42_000374;product=multidrug efflux MFS transporter MdtH;protein_id=HBQ7388510.1;transl_table=11 DAFVNP010000004.1 tpg gene 21757 22341 . + . ID=gene-L8R42_000375;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=L8R42_000375 DAFVNP010000004.1 Protein Homology CDS 21757 22341 . + 0 ID=cds-HBQ7388511.1;Parent=gene-L8R42_000375;Dbxref=NCBI_GP:HBQ7388511.1;Name=HBQ7388511.1;gbkey=CDS;gene=rimJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=L8R42_000375;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=HBQ7388511.1;transl_table=11 DAFVNP010000004.1 tpg gene 22377 23024 . + . ID=gene-L8R42_000376;Name=L8R42_000376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000376 DAFVNP010000004.1 Protein Homology CDS 22377 23024 . + 0 ID=cds-HBQ7388512.1;Parent=gene-L8R42_000376;Dbxref=NCBI_GP:HBQ7388512.1;Name=HBQ7388512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=L8R42_000376;product=YceH family protein;protein_id=HBQ7388512.1;transl_table=11 DAFVNP010000004.1 tpg gene 23026 23949 . + . ID=gene-L8R42_000377;Name=L8R42_000377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000377 DAFVNP010000004.1 Protein Homology CDS 23026 23949 . + 0 ID=cds-HBQ7388513.1;Parent=gene-L8R42_000377;Dbxref=NCBI_GP:HBQ7388513.1;Name=HBQ7388513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=L8R42_000377;product=Gfo/Idh/MocA family oxidoreductase;protein_id=HBQ7388513.1;transl_table=11 DAFVNP010000004.1 tpg gene 24253 25788 . + . ID=gene-L8R42_000378;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=L8R42_000378 DAFVNP010000004.1 Protein Homology CDS 24253 25788 . + 0 ID=cds-HBQ7388514.1;Parent=gene-L8R42_000378;Dbxref=NCBI_GP:HBQ7388514.1;Name=HBQ7388514.1;gbkey=CDS;gene=murJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=L8R42_000378;product=murein biosynthesis integral membrane protein MurJ;protein_id=HBQ7388514.1;transl_table=11 DAFVNP010000004.1 tpg gene 25870 26292 . - . ID=gene-L8R42_000379;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=L8R42_000379 DAFVNP010000004.1 Protein Homology CDS 25870 26292 . - 0 ID=cds-HBQ7388515.1;Parent=gene-L8R42_000379;Dbxref=NCBI_GP:HBQ7388515.1;Name=HBQ7388515.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=L8R42_000379;product=flagella biosynthesis chaperone FlgN;protein_id=HBQ7388515.1;transl_table=11 DAFVNP010000004.1 tpg gene 26297 26590 . - . ID=gene-L8R42_000380;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=L8R42_000380 DAFVNP010000004.1 Protein Homology CDS 26297 26590 . - 0 ID=cds-HBQ7388516.1;Parent=gene-L8R42_000380;Dbxref=NCBI_GP:HBQ7388516.1;Name=HBQ7388516.1;gbkey=CDS;gene=flgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=L8R42_000380;product=anti-sigma-28 factor FlgM;protein_id=HBQ7388516.1;transl_table=11 DAFVNP010000004.1 tpg gene 26682 27341 . - . ID=gene-L8R42_000381;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=L8R42_000381 DAFVNP010000004.1 Protein Homology CDS 26682 27341 . - 0 ID=cds-HBQ7388517.1;Parent=gene-L8R42_000381;Dbxref=NCBI_GP:HBQ7388517.1;Name=HBQ7388517.1;gbkey=CDS;gene=flgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=L8R42_000381;product=flagellar basal body P-ring formation protein FlgA;protein_id=HBQ7388517.1;transl_table=11 DAFVNP010000004.1 tpg gene 27498 27914 . + . ID=gene-L8R42_000382;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=L8R42_000382 DAFVNP010000004.1 Protein Homology CDS 27498 27914 . + 0 ID=cds-HBQ7388518.1;Parent=gene-L8R42_000382;Dbxref=NCBI_GP:HBQ7388518.1;Name=HBQ7388518.1;gbkey=CDS;gene=flgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=L8R42_000382;product=flagellar basal body rod protein FlgB;protein_id=HBQ7388518.1;transl_table=11 DAFVNP010000004.1 tpg gene 27918 28322 . + . ID=gene-L8R42_000383;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=L8R42_000383 DAFVNP010000004.1 Protein Homology CDS 27918 28322 . + 0 ID=cds-HBQ7388519.1;Parent=gene-L8R42_000383;Dbxref=NCBI_GP:HBQ7388519.1;Name=HBQ7388519.1;gbkey=CDS;gene=flgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=L8R42_000383;product=flagellar basal body rod protein FlgC;protein_id=HBQ7388519.1;transl_table=11 DAFVNP010000004.1 tpg gene 28334 29032 . + . ID=gene-L8R42_000384;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=L8R42_000384 DAFVNP010000004.1 Protein Homology CDS 28334 29032 . + 0 ID=cds-HBQ7388520.1;Parent=gene-L8R42_000384;Dbxref=NCBI_GP:HBQ7388520.1;Name=HBQ7388520.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=L8R42_000384;product=flagellar hook assembly protein FlgD;protein_id=HBQ7388520.1;transl_table=11 DAFVNP010000004.1 tpg gene 29059 30276 . + . ID=gene-L8R42_000385;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=L8R42_000385 DAFVNP010000004.1 Protein Homology CDS 29059 30276 . + 0 ID=cds-HBQ7388521.1;Parent=gene-L8R42_000385;Dbxref=NCBI_GP:HBQ7388521.1;Name=HBQ7388521.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=L8R42_000385;product=flagellar hook protein FlgE;protein_id=HBQ7388521.1;transl_table=11 DAFVNP010000004.1 tpg gene 30297 31052 . + . ID=gene-L8R42_000386;Name=L8R42_000386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000386 DAFVNP010000004.1 Protein Homology CDS 30297 31052 . + 0 ID=cds-HBQ7388522.1;Parent=gene-L8R42_000386;Dbxref=NCBI_GP:HBQ7388522.1;Name=HBQ7388522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=L8R42_000386;product=flagellar basal body rod protein FlgF;protein_id=HBQ7388522.1;transl_table=11 DAFVNP010000004.1 tpg gene 31066 31848 . + . ID=gene-L8R42_000387;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=L8R42_000387 DAFVNP010000004.1 Protein Homology CDS 31066 31848 . + 0 ID=cds-HBQ7388523.1;Parent=gene-L8R42_000387;Dbxref=NCBI_GP:HBQ7388523.1;Name=HBQ7388523.1;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=L8R42_000387;product=flagellar basal-body rod protein FlgG;protein_id=HBQ7388523.1;transl_table=11 DAFVNP010000004.1 tpg gene 31903 32601 . + . ID=gene-L8R42_000388;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=L8R42_000388 DAFVNP010000004.1 Protein Homology CDS 31903 32601 . + 0 ID=cds-HBQ7388524.1;Parent=gene-L8R42_000388;Dbxref=NCBI_GP:HBQ7388524.1;Name=HBQ7388524.1;gbkey=CDS;gene=flgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=L8R42_000388;product=flagellar basal body L-ring protein FlgH;protein_id=HBQ7388524.1;transl_table=11 DAFVNP010000004.1 tpg gene 32613 33710 . + . ID=gene-L8R42_000389;Name=L8R42_000389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000389 DAFVNP010000004.1 Protein Homology CDS 32613 33710 . + 0 ID=cds-HBQ7388525.1;Parent=gene-L8R42_000389;Dbxref=NCBI_GP:HBQ7388525.1;Name=HBQ7388525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=L8R42_000389;product=flagellar basal body P-ring protein FlgI;protein_id=HBQ7388525.1;transl_table=11 DAFVNP010000004.1 tpg gene 33710 34660 . + . ID=gene-L8R42_000390;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=L8R42_000390 DAFVNP010000004.1 Protein Homology CDS 33710 34660 . + 0 ID=cds-HBQ7388526.1;Parent=gene-L8R42_000390;Dbxref=NCBI_GP:HBQ7388526.1;Name=HBQ7388526.1;gbkey=CDS;gene=flgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=L8R42_000390;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=HBQ7388526.1;transl_table=11 DAFVNP010000004.1 tpg gene 34725 36386 . + . ID=gene-L8R42_000391;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=L8R42_000391 DAFVNP010000004.1 Protein Homology CDS 34725 36386 . + 0 ID=cds-HBQ7388527.1;Parent=gene-L8R42_000391;Dbxref=NCBI_GP:HBQ7388527.1;Name=HBQ7388527.1;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=L8R42_000391;product=flagellar hook-associated protein FlgK;protein_id=HBQ7388527.1;transl_table=11 DAFVNP010000004.1 tpg gene 36401 37354 . + . ID=gene-L8R42_000392;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=L8R42_000392 DAFVNP010000004.1 Protein Homology CDS 36401 37354 . + 0 ID=cds-HBQ7388528.1;Parent=gene-L8R42_000392;Dbxref=NCBI_GP:HBQ7388528.1;Name=HBQ7388528.1;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=L8R42_000392;product=flagellar hook-associated protein FlgL;protein_id=HBQ7388528.1;transl_table=11 DAFVNP010000004.1 tpg gene 37611 40817 . - . ID=gene-L8R42_000393;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=L8R42_000393 DAFVNP010000004.1 Protein Homology CDS 37611 40817 . - 0 ID=cds-HBQ7388529.1;Parent=gene-L8R42_000393;Dbxref=NCBI_GP:HBQ7388529.1;Name=HBQ7388529.1;gbkey=CDS;gene=rne;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=L8R42_000393;product=ribonuclease E;protein_id=HBQ7388529.1;transl_table=11 DAFVNP010000004.1 tpg gene 41391 42350 . + . ID=gene-L8R42_000394;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=L8R42_000394 DAFVNP010000004.1 Protein Homology CDS 41391 42350 . + 0 ID=cds-HBQ7388530.1;Parent=gene-L8R42_000394;Dbxref=NCBI_GP:HBQ7388530.1;Name=HBQ7388530.1;gbkey=CDS;gene=rluC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=L8R42_000394;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=HBQ7388530.1;transl_table=11 DAFVNP010000004.1 tpg gene 42506 43249 . + . ID=gene-L8R42_000395;Name=L8R42_000395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000395 DAFVNP010000004.1 Protein Homology CDS 42506 43249 . + 0 ID=cds-HBQ7388531.1;Parent=gene-L8R42_000395;Dbxref=NCBI_GP:HBQ7388531.1;Name=HBQ7388531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=L8R42_000395;product=DUF3053 domain-containing protein;protein_id=HBQ7388531.1;transl_table=11 DAFVNP010000004.1 tpg gene 43453 43677 . + . ID=gene-L8R42_000396;Name=L8R42_000396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000396 DAFVNP010000004.1 GeneMarkS-2+ CDS 43453 43677 . + 0 ID=cds-HBQ7388532.1;Parent=gene-L8R42_000396;Dbxref=NCBI_GP:HBQ7388532.1;Name=HBQ7388532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_000396;product=hypothetical protein;protein_id=HBQ7388532.1;transl_table=11 DAFVNP010000004.1 tpg gene 43748 44332 . - . ID=gene-L8R42_000397;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=L8R42_000397 DAFVNP010000004.1 Protein Homology CDS 43748 44332 . - 0 ID=cds-HBQ7388533.1;Parent=gene-L8R42_000397;Dbxref=NCBI_GP:HBQ7388533.1;Name=HBQ7388533.1;gbkey=CDS;gene=maf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=L8R42_000397;product=septum formation inhibitor Maf;protein_id=HBQ7388533.1;transl_table=11 DAFVNP010000004.1 tpg gene 44530 45051 . + . ID=gene-L8R42_000398;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=L8R42_000398 DAFVNP010000004.1 Protein Homology CDS 44530 45051 . + 0 ID=cds-HBQ7388534.1;Parent=gene-L8R42_000398;Dbxref=NCBI_GP:HBQ7388534.1;Name=HBQ7388534.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=L8R42_000398;product=23S rRNA accumulation protein YceD;protein_id=HBQ7388534.1;transl_table=11 DAFVNP010000004.1 tpg gene 45103 45276 . + . ID=gene-L8R42_000399;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=L8R42_000399 DAFVNP010000004.1 Protein Homology CDS 45103 45276 . + 0 ID=cds-HBQ7388535.1;Parent=gene-L8R42_000399;Dbxref=NCBI_GP:HBQ7388535.1;Name=HBQ7388535.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=L8R42_000399;product=50S ribosomal protein L32;protein_id=HBQ7388535.1;transl_table=11 DAFVNP010000004.1 tpg gene 45410 46489 . + . ID=gene-L8R42_000400;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=L8R42_000400 DAFVNP010000004.1 Protein Homology CDS 45410 46489 . + 0 ID=cds-HBQ7388536.1;Parent=gene-L8R42_000400;Dbxref=NCBI_GP:HBQ7388536.1;Name=HBQ7388536.1;gbkey=CDS;gene=plsX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=L8R42_000400;product=phosphate acyltransferase PlsX;protein_id=HBQ7388536.1;transl_table=11 DAFVNP010000004.1 tpg gene 46569 47522 . + . ID=gene-L8R42_000401;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=L8R42_000401 DAFVNP010000004.1 Protein Homology CDS 46569 47522 . + 0 ID=cds-HBQ7388537.1;Parent=gene-L8R42_000401;Dbxref=NCBI_GP:HBQ7388537.1;Name=HBQ7388537.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=L8R42_000401;product=beta-ketoacyl-ACP synthase III;protein_id=HBQ7388537.1;transl_table=11 DAFVNP010000004.1 tpg gene 47538 48467 . + . ID=gene-L8R42_000402;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=L8R42_000402 DAFVNP010000004.1 Protein Homology CDS 47538 48467 . + 0 ID=cds-HBQ7388538.1;Parent=gene-L8R42_000402;Dbxref=NCBI_GP:HBQ7388538.1;Name=HBQ7388538.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=L8R42_000402;product=ACP S-malonyltransferase;protein_id=HBQ7388538.1;transl_table=11 DAFVNP010000004.1 tpg gene 48480 49214 . + . ID=gene-L8R42_000403;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=L8R42_000403 DAFVNP010000004.1 Protein Homology CDS 48480 49214 . + 0 ID=cds-HBQ7388539.1;Parent=gene-L8R42_000403;Dbxref=NCBI_GP:HBQ7388539.1;Name=HBQ7388539.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=L8R42_000403;product=3-oxoacyl-ACP reductase FabG;protein_id=HBQ7388539.1;transl_table=11 DAFVNP010000004.1 tpg gene 49370 49606 . + . ID=gene-L8R42_000404;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=L8R42_000404 DAFVNP010000004.1 Protein Homology CDS 49370 49606 . + 0 ID=cds-HBQ7388540.1;Parent=gene-L8R42_000404;Dbxref=NCBI_GP:HBQ7388540.1;Name=HBQ7388540.1;gbkey=CDS;gene=acpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=L8R42_000404;product=acyl carrier protein;protein_id=HBQ7388540.1;transl_table=11 DAFVNP010000004.1 tpg gene 49692 50933 . + . ID=gene-L8R42_000405;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=L8R42_000405 DAFVNP010000004.1 Protein Homology CDS 49692 50933 . + 0 ID=cds-HBQ7388541.1;Parent=gene-L8R42_000405;Dbxref=NCBI_GP:HBQ7388541.1;Name=HBQ7388541.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=L8R42_000405;product=beta-ketoacyl-ACP synthase II;protein_id=HBQ7388541.1;transl_table=11 DAFVNP010000004.1 tpg gene 51057 51866 . + . ID=gene-L8R42_000406;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=L8R42_000406 DAFVNP010000004.1 Protein Homology CDS 51057 51866 . + 0 ID=cds-HBQ7388542.1;Parent=gene-L8R42_000406;Dbxref=NCBI_GP:HBQ7388542.1;Name=HBQ7388542.1;gbkey=CDS;gene=pabC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=L8R42_000406;product=aminodeoxychorismate lyase;protein_id=HBQ7388542.1;transl_table=11 DAFVNP010000004.1 tpg gene 51869 52891 . + . ID=gene-L8R42_000407;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=L8R42_000407 DAFVNP010000004.1 Protein Homology CDS 51869 52891 . + 0 ID=cds-HBQ7388543.1;Parent=gene-L8R42_000407;Dbxref=NCBI_GP:HBQ7388543.1;Name=HBQ7388543.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=L8R42_000407;product=cell division protein YceG;protein_id=HBQ7388543.1;transl_table=11 DAFVNP010000004.1 tpg gene 52881 53522 . + . ID=gene-L8R42_000408;Name=L8R42_000408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000408 DAFVNP010000004.1 Protein Homology CDS 52881 53522 . + 0 ID=cds-HBQ7388544.1;Parent=gene-L8R42_000408;Dbxref=NCBI_GP:HBQ7388544.1;Name=HBQ7388544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=L8R42_000408;product=dTMP kinase;protein_id=HBQ7388544.1;transl_table=11 DAFVNP010000004.1 tpg gene 53519 54523 . + . ID=gene-L8R42_000409;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=L8R42_000409 DAFVNP010000004.1 Protein Homology CDS 53519 54523 . + 0 ID=cds-HBQ7388545.1;Parent=gene-L8R42_000409;Dbxref=NCBI_GP:HBQ7388545.1;Name=HBQ7388545.1;gbkey=CDS;gene=holB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=L8R42_000409;product=DNA polymerase III subunit delta';protein_id=HBQ7388545.1;transl_table=11 DAFVNP010000004.1 tpg gene 54534 55331 . + . ID=gene-L8R42_000410;Name=L8R42_000410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000410 DAFVNP010000004.1 Protein Homology CDS 54534 55331 . + 0 ID=cds-HBQ7388546.1;Parent=gene-L8R42_000410;Dbxref=NCBI_GP:HBQ7388546.1;Name=HBQ7388546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=L8R42_000410;product=metal-dependent hydrolase;protein_id=HBQ7388546.1;transl_table=11 DAFVNP010000004.1 tpg gene 55626 57059 . + . ID=gene-L8R42_000411;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=L8R42_000411 DAFVNP010000004.1 Protein Homology CDS 55626 57059 . + 0 ID=cds-HBQ7388547.1;Parent=gene-L8R42_000411;Dbxref=NCBI_GP:HBQ7388547.1;Name=HBQ7388547.1;gbkey=CDS;gene=ptsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=L8R42_000411;product=PTS glucose transporter subunit IIBC;protein_id=HBQ7388547.1;transl_table=11 DAFVNP010000004.1 tpg gene 57144 59318 . - . ID=gene-L8R42_000412;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=L8R42_000412 DAFVNP010000004.1 Protein Homology CDS 57144 59318 . - 0 ID=cds-HBQ7388548.1;Parent=gene-L8R42_000412;Dbxref=NCBI_GP:HBQ7388548.1;Name=HBQ7388548.1;gbkey=CDS;gene=fhuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=L8R42_000412;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=HBQ7388548.1;transl_table=11 DAFVNP010000004.1 tpg gene 59660 60019 . + . ID=gene-L8R42_000413;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=L8R42_000413 DAFVNP010000004.1 Protein Homology CDS 59660 60019 . + 0 ID=cds-HBQ7388549.1;Parent=gene-L8R42_000413;Dbxref=NCBI_GP:HBQ7388549.1;Name=HBQ7388549.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=L8R42_000413;product=purine nucleoside phosphoramidase;protein_id=HBQ7388549.1;transl_table=11 DAFVNP010000004.1 tpg gene 60022 60396 . + . ID=gene-L8R42_000414;Name=L8R42_000414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000414 DAFVNP010000004.1 Protein Homology CDS 60022 60396 . + 0 ID=cds-HBQ7388550.1;Parent=gene-L8R42_000414;Dbxref=NCBI_GP:HBQ7388550.1;Name=HBQ7388550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=L8R42_000414;product=YcfL family protein;protein_id=HBQ7388550.1;transl_table=11 DAFVNP010000004.1 tpg gene 60410 61048 . + . ID=gene-L8R42_000415;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=L8R42_000415 DAFVNP010000004.1 Protein Homology CDS 60410 61048 . + 0 ID=cds-HBQ7388551.1;Parent=gene-L8R42_000415;Dbxref=NCBI_GP:HBQ7388551.1;Name=HBQ7388551.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=L8R42_000415;product=penicillin-binding protein activator LpoB;protein_id=HBQ7388551.1;transl_table=11 DAFVNP010000004.1 tpg gene 61029 61853 . + . ID=gene-L8R42_000416;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=L8R42_000416 DAFVNP010000004.1 Protein Homology CDS 61029 61853 . + 0 ID=cds-HBQ7388552.1;Parent=gene-L8R42_000416;Dbxref=NCBI_GP:HBQ7388552.1;Name=HBQ7388552.1;gbkey=CDS;gene=thiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=L8R42_000416;product=thiamine kinase;protein_id=HBQ7388552.1;transl_table=11 DAFVNP010000004.1 tpg gene 61864 62889 . + . ID=gene-L8R42_000417;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=L8R42_000417 DAFVNP010000004.1 Protein Homology CDS 61864 62889 . + 0 ID=cds-HBQ7388553.1;Parent=gene-L8R42_000417;Dbxref=NCBI_GP:HBQ7388553.1;Name=HBQ7388553.1;gbkey=CDS;gene=nagZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=L8R42_000417;product=beta-N-acetylhexosaminidase;protein_id=HBQ7388553.1;transl_table=11 DAFVNP010000004.1 tpg gene 62914 63456 . + . ID=gene-L8R42_000418;Name=L8R42_000418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000418 DAFVNP010000004.1 Protein Homology CDS 62914 63456 . + 0 ID=cds-HBQ7388554.1;Parent=gene-L8R42_000418;Dbxref=NCBI_GP:HBQ7388554.1;Name=HBQ7388554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=L8R42_000418;product=alpha/beta hydrolase;protein_id=HBQ7388554.1;transl_table=11 DAFVNP010000004.1 tpg gene 63711 65015 . + . ID=gene-L8R42_000419;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=L8R42_000419 DAFVNP010000004.1 Protein Homology CDS 63711 65015 . + 0 ID=cds-HBQ7388555.1;Parent=gene-L8R42_000419;Dbxref=NCBI_GP:HBQ7388555.1;Name=HBQ7388555.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=L8R42_000419;product=NADH-quinone dehydrogenase;protein_id=HBQ7388555.1;transl_table=11 DAFVNP010000004.1 tpg gene 65194 65733 . + . ID=gene-L8R42_000420;Name=L8R42_000420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000420 DAFVNP010000004.1 Protein Homology CDS 65194 65733 . + 0 ID=cds-HBQ7388556.1;Parent=gene-L8R42_000420;Dbxref=NCBI_GP:HBQ7388556.1;Name=HBQ7388556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=L8R42_000420;product=glycine zipper 2TM domain-containing protein;protein_id=HBQ7388556.1;transl_table=11 DAFVNP010000004.1 tpg gene 65808 66443 . - . ID=gene-L8R42_000421;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=L8R42_000421 DAFVNP010000004.1 Protein Homology CDS 65808 66443 . - 0 ID=cds-HBQ7388557.1;Parent=gene-L8R42_000421;Dbxref=NCBI_GP:HBQ7388557.1;Name=HBQ7388557.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=L8R42_000421;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=HBQ7388557.1;transl_table=11 DAFVNP010000004.1 tpg gene 66685 66942 . + . ID=gene-L8R42_000422;Name=L8R42_000422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000422 DAFVNP010000004.1 Protein Homology CDS 66685 66942 . + 0 ID=cds-HBQ7388558.1;Parent=gene-L8R42_000422;Dbxref=NCBI_GP:HBQ7388558.1;Name=HBQ7388558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=L8R42_000422;product=DUF1471 domain-containing protein;protein_id=HBQ7388558.1;transl_table=11 DAFVNP010000004.1 tpg gene 67039 68004 . - . ID=gene-L8R42_000423;Name=L8R42_000423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000423 DAFVNP010000004.1 Protein Homology CDS 67039 68004 . - 0 ID=cds-HBQ7388559.1;Parent=gene-L8R42_000423;Dbxref=NCBI_GP:HBQ7388559.1;Name=HBQ7388559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=L8R42_000423;product=L%2CD-transpeptidase family protein;protein_id=HBQ7388559.1;transl_table=11 DAFVNP010000004.1 tpg gene 68152 71598 . - . ID=gene-L8R42_000424;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=L8R42_000424 DAFVNP010000004.1 Protein Homology CDS 68152 71598 . - 0 ID=cds-HBQ7388560.1;Parent=gene-L8R42_000424;Dbxref=NCBI_GP:HBQ7388560.1;Name=HBQ7388560.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=L8R42_000424;product=transcription-repair coupling factor;protein_id=HBQ7388560.1;transl_table=11 DAFVNP010000004.1 tpg gene 71936 73135 . + . ID=gene-L8R42_000425;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=L8R42_000425 DAFVNP010000004.1 Protein Homology CDS 71936 73135 . + 0 ID=cds-HBQ7388561.1;Parent=gene-L8R42_000425;Dbxref=NCBI_GP:HBQ7388561.1;Name=HBQ7388561.1;gbkey=CDS;gene=lolC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=L8R42_000425;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=HBQ7388561.1;transl_table=11 DAFVNP010000004.1 tpg gene 73128 73829 . + . ID=gene-L8R42_000426;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=L8R42_000426 DAFVNP010000004.1 Protein Homology CDS 73128 73829 . + 0 ID=cds-HBQ7388562.1;Parent=gene-L8R42_000426;Dbxref=NCBI_GP:HBQ7388562.1;Name=HBQ7388562.1;gbkey=CDS;gene=lolD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=L8R42_000426;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=HBQ7388562.1;transl_table=11 DAFVNP010000004.1 tpg gene 73829 75073 . + . ID=gene-L8R42_000427;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=L8R42_000427 DAFVNP010000004.1 Protein Homology CDS 73829 75073 . + 0 ID=cds-HBQ7388563.1;Parent=gene-L8R42_000427;Dbxref=NCBI_GP:HBQ7388563.1;Name=HBQ7388563.1;gbkey=CDS;gene=lolE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=L8R42_000427;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=HBQ7388563.1;transl_table=11 DAFVNP010000004.1 tpg gene 75102 76013 . + . ID=gene-L8R42_000428;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=L8R42_000428 DAFVNP010000004.1 Protein Homology CDS 75102 76013 . + 0 ID=cds-HBQ7388564.1;Parent=gene-L8R42_000428;Dbxref=NCBI_GP:HBQ7388564.1;Name=HBQ7388564.1;gbkey=CDS;gene=nagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=L8R42_000428;product=N-acetylglucosamine kinase;protein_id=HBQ7388564.1;transl_table=11 DAFVNP010000004.1 tpg gene 76032 76853 . + . ID=gene-L8R42_000429;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=L8R42_000429 DAFVNP010000004.1 Protein Homology CDS 76032 76853 . + 0 ID=cds-HBQ7388565.1;Parent=gene-L8R42_000429;Dbxref=NCBI_GP:HBQ7388565.1;Name=HBQ7388565.1;gbkey=CDS;gene=cobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=L8R42_000429;product=NAD-dependent protein deacylase;protein_id=HBQ7388565.1;transl_table=11 DAFVNP010000004.1 tpg gene 76935 77981 . - . ID=gene-L8R42_000430;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=L8R42_000430 DAFVNP010000004.1 Protein Homology CDS 76935 77981 . - 0 ID=cds-HBQ7388566.1;Parent=gene-L8R42_000430;Dbxref=NCBI_GP:HBQ7388566.1;Name=HBQ7388566.1;gbkey=CDS;gene=potD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=L8R42_000430;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=HBQ7388566.1;transl_table=11 DAFVNP010000004.1 tpg gene 78006 78785 . - . ID=gene-L8R42_000431;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=L8R42_000431 DAFVNP010000004.1 Protein Homology CDS 78006 78785 . - 0 ID=cds-HBQ7388567.1;Parent=gene-L8R42_000431;Dbxref=NCBI_GP:HBQ7388567.1;Name=HBQ7388567.1;gbkey=CDS;gene=potC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=L8R42_000431;product=spermidine/putrescine ABC transporter permease PotC;protein_id=HBQ7388567.1;transl_table=11 DAFVNP010000004.1 tpg gene 79101 80111 . - . ID=gene-L8R42_000432;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=L8R42_000432 DAFVNP010000004.1 Protein Homology CDS 79101 80111 . - 0 ID=cds-HBQ7388568.1;Parent=gene-L8R42_000432;Dbxref=NCBI_GP:HBQ7388568.1;Name=HBQ7388568.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=L8R42_000432;product=SPI-2 type III secretion system effector SifA;protein_id=HBQ7388568.1;transl_table=11 DAFVNP010000004.1 tpg gene 80440 81303 . - . ID=gene-L8R42_000433;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=L8R42_000433 DAFVNP010000004.1 Protein Homology CDS 80440 81303 . - 0 ID=cds-HBQ7388569.1;Parent=gene-L8R42_000433;Dbxref=NCBI_GP:HBQ7388569.1;Name=HBQ7388569.1;gbkey=CDS;gene=potB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=L8R42_000433;product=spermidine/putrescine ABC transporter permease PotB;protein_id=HBQ7388569.1;transl_table=11 DAFVNP010000004.1 tpg gene 81287 82423 . - . ID=gene-L8R42_000434;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=L8R42_000434 DAFVNP010000004.1 Protein Homology CDS 81287 82423 . - 0 ID=cds-HBQ7388570.1;Parent=gene-L8R42_000434;Dbxref=NCBI_GP:HBQ7388570.1;Name=HBQ7388570.1;gbkey=CDS;gene=potA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=L8R42_000434;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=HBQ7388570.1;transl_table=11 DAFVNP010000004.1 tpg gene 82674 83903 . + . ID=gene-L8R42_000435;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=L8R42_000435 DAFVNP010000004.1 Protein Homology CDS 82674 83903 . + 0 ID=cds-HBQ7388571.1;Parent=gene-L8R42_000435;Dbxref=NCBI_GP:HBQ7388571.1;Name=HBQ7388571.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=L8R42_000435;product=peptidase T;protein_id=HBQ7388571.1;transl_table=11 DAFVNP010000004.1 tpg gene 83907 85241 . + . ID=gene-L8R42_000436;Name=L8R42_000436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000436 DAFVNP010000004.1 Protein Homology CDS 83907 85241 . + 0 ID=cds-HBQ7388572.1;Parent=gene-L8R42_000436;Dbxref=NCBI_GP:HBQ7388572.1;Name=HBQ7388572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=L8R42_000436;product=hypothetical protein;protein_id=HBQ7388572.1;transl_table=11 DAFVNP010000004.1 tpg gene 85281 86402 . - . ID=gene-L8R42_000437;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=L8R42_000437 DAFVNP010000004.1 Protein Homology CDS 85281 86402 . - 0 ID=cds-HBQ7388573.1;Parent=gene-L8R42_000437;Dbxref=NCBI_GP:HBQ7388573.1;Name=HBQ7388573.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=L8R42_000437;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=HBQ7388573.1;transl_table=11 DAFVNP010000004.1 tpg gene 86483 87946 . - . ID=gene-L8R42_000438;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=L8R42_000438 DAFVNP010000004.1 Protein Homology CDS 86483 87946 . - 0 ID=cds-HBQ7388574.1;Parent=gene-L8R42_000438;Dbxref=NCBI_GP:HBQ7388574.1;Name=HBQ7388574.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=L8R42_000438;product=two-component system sensor histidine kinase PhoQ;protein_id=HBQ7388574.1;transl_table=11 DAFVNP010000004.1 tpg gene 87946 88617 . - . ID=gene-L8R42_000439;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=L8R42_000439 DAFVNP010000004.1 Protein Homology CDS 87946 88617 . - 0 ID=cds-HBQ7388575.1;Parent=gene-L8R42_000439;Dbxref=NCBI_GP:HBQ7388575.1;Name=HBQ7388575.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=L8R42_000439;product=two-component system response regulator PhoP;protein_id=HBQ7388575.1;transl_table=11 DAFVNP010000004.1 tpg gene 88744 90114 . - . ID=gene-L8R42_000440;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=L8R42_000440 DAFVNP010000004.1 Protein Homology CDS 88744 90114 . - 0 ID=cds-HBQ7388576.1;Parent=gene-L8R42_000440;Dbxref=NCBI_GP:HBQ7388576.1;Name=HBQ7388576.1;gbkey=CDS;gene=purB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=L8R42_000440;product=adenylosuccinate lyase;protein_id=HBQ7388576.1;transl_table=11 DAFVNP010000004.1 tpg gene 90118 90759 . - . ID=gene-L8R42_000441;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=L8R42_000441 DAFVNP010000004.1 Protein Homology CDS 90118 90759 . - 0 ID=cds-HBQ7388577.1;Parent=gene-L8R42_000441;Dbxref=NCBI_GP:HBQ7388577.1;Name=HBQ7388577.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=L8R42_000441;product=high frequency lysogenization protein HflD;protein_id=HBQ7388577.1;transl_table=11 DAFVNP010000004.1 tpg gene 90846 91952 . - . ID=gene-L8R42_000442;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=L8R42_000442 DAFVNP010000004.1 Protein Homology CDS 90846 91952 . - 0 ID=cds-HBQ7388578.1;Parent=gene-L8R42_000442;Dbxref=NCBI_GP:HBQ7388578.1;Name=HBQ7388578.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=L8R42_000442;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=HBQ7388578.1;transl_table=11 DAFVNP010000004.1 tpg gene 92006 92467 . - . ID=gene-L8R42_000443;Name=L8R42_000443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000443 DAFVNP010000004.1 Protein Homology CDS 92006 92467 . - 0 ID=cds-HBQ7388579.1;Parent=gene-L8R42_000443;Dbxref=NCBI_GP:HBQ7388579.1;Name=HBQ7388579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=L8R42_000443;product=NUDIX hydrolase;protein_id=HBQ7388579.1;transl_table=11 DAFVNP010000004.1 tpg gene 92479 92808 . - . ID=gene-L8R42_000444;Name=L8R42_000444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000444 DAFVNP010000004.1 Protein Homology CDS 92479 92808 . - 0 ID=cds-HBQ7388580.1;Parent=gene-L8R42_000444;Dbxref=NCBI_GP:HBQ7388580.1;Name=HBQ7388580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=L8R42_000444;product=DUF1311 domain-containing protein;protein_id=HBQ7388580.1;transl_table=11 DAFVNP010000004.1 tpg gene 92805 93470 . - . ID=gene-L8R42_000445;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=L8R42_000445 DAFVNP010000004.1 Protein Homology CDS 92805 93470 . - 0 ID=cds-HBQ7388581.1;Parent=gene-L8R42_000445;Dbxref=NCBI_GP:HBQ7388581.1;Name=HBQ7388581.1;gbkey=CDS;gene=rluE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=L8R42_000445;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=HBQ7388581.1;transl_table=11 DAFVNP010000004.1 tpg gene 93642 94892 . + . ID=gene-L8R42_000446;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=L8R42_000446 DAFVNP010000004.1 Protein Homology CDS 93642 94892 . + 0 ID=cds-HBQ7388582.1;Parent=gene-L8R42_000446;Dbxref=NCBI_GP:HBQ7388582.1;Name=HBQ7388582.1;gbkey=CDS;gene=icd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=L8R42_000446;product=NADP-dependent isocitrate dehydrogenase;protein_id=HBQ7388582.1;transl_table=11 DAFVNP010000004.1 tpg gene 95339 96463 . + . ID=gene-L8R42_000447;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=L8R42_000447 DAFVNP010000004.1 Protein Homology CDS 95339 96463 . + 0 ID=cds-HBQ7388583.1;Parent=gene-L8R42_000447;Dbxref=NCBI_GP:HBQ7388583.1;Name=HBQ7388583.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=L8R42_000447;product=type III secretion system effector SopF;protein_id=HBQ7388583.1;transl_table=11 DAFVNP010000004.1 tpg gene 96735 96929 . - . ID=gene-L8R42_000448;Name=L8R42_000448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000448 DAFVNP010000004.1 Protein Homology CDS 96735 96929 . - 0 ID=cds-HBQ7388584.1;Parent=gene-L8R42_000448;Dbxref=NCBI_GP:HBQ7388584.1;Name=HBQ7388584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531076.1;locus_tag=L8R42_000448;product=hypothetical protein;protein_id=HBQ7388584.1;transl_table=11 ##sequence-region DAFVNP010000005.1 1 93019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000005.1 tpg region 1 93019 . + . ID=DAFVNP010000005.1:1..93019;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000005.1 tpg gene 21 566 . - . ID=gene-L8R42_000449;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=L8R42_000449 DAFVNP010000005.1 Protein Homology CDS 21 566 . - 0 ID=cds-HBQ7388585.1;Parent=gene-L8R42_000449;Dbxref=NCBI_GP:HBQ7388585.1;Name=HBQ7388585.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=L8R42_000449;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=HBQ7388585.1;transl_table=11 DAFVNP010000005.1 tpg gene 578 2029 . - . ID=gene-L8R42_000450;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=L8R42_000450 DAFVNP010000005.1 Protein Homology CDS 578 2029 . - 0 ID=cds-HBQ7388586.1;Parent=gene-L8R42_000450;Dbxref=NCBI_GP:HBQ7388586.1;Name=HBQ7388586.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=L8R42_000450;product=Trk system potassium transporter TrkH;protein_id=HBQ7388586.1;transl_table=11 DAFVNP010000005.1 tpg gene 2068 2682 . - . ID=gene-L8R42_000451;Name=L8R42_000451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000451 DAFVNP010000005.1 Protein Homology CDS 2068 2682 . - 0 ID=cds-HBQ7388587.1;Parent=gene-L8R42_000451;Dbxref=NCBI_GP:HBQ7388587.1;Name=HBQ7388587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=L8R42_000451;product=IMPACT family protein;protein_id=HBQ7388587.1;transl_table=11 DAFVNP010000005.1 tpg gene 2682 4013 . - . ID=gene-L8R42_000452;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=L8R42_000452 DAFVNP010000005.1 Protein Homology CDS 2682 4013 . - 0 ID=cds-HBQ7388588.1;Parent=gene-L8R42_000452;Dbxref=NCBI_GP:HBQ7388588.1;Name=HBQ7388588.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=L8R42_000452;product=Xaa-Pro dipeptidase;protein_id=HBQ7388588.1;transl_table=11 DAFVNP010000005.1 tpg gene 4203 6392 . + . ID=gene-L8R42_000453;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=L8R42_000453 DAFVNP010000005.1 Protein Homology CDS 4203 6392 . + 0 ID=cds-HBQ7388589.1;Parent=gene-L8R42_000453;Dbxref=NCBI_GP:HBQ7388589.1;Name=HBQ7388589.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=L8R42_000453;product=fatty acid oxidation complex subunit alpha FadB;protein_id=HBQ7388589.1;transl_table=11 DAFVNP010000005.1 tpg gene 6402 7565 . + . ID=gene-L8R42_000454;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=L8R42_000454 DAFVNP010000005.1 Protein Homology CDS 6402 7565 . + 0 ID=cds-HBQ7388590.1;Parent=gene-L8R42_000454;Dbxref=NCBI_GP:HBQ7388590.1;Name=HBQ7388590.1;gbkey=CDS;gene=fadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=L8R42_000454;product=acetyl-CoA C-acyltransferase FadA;protein_id=HBQ7388590.1;transl_table=11 DAFVNP010000005.1 tpg gene 7762 9585 . - . ID=gene-L8R42_000455;Name=L8R42_000455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000455 DAFVNP010000005.1 Protein Homology CDS 7762 9585 . - 0 ID=cds-HBQ7388591.1;Parent=gene-L8R42_000455;Dbxref=NCBI_GP:HBQ7388591.1;Name=HBQ7388591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=L8R42_000455;product=aryl-sulfate sulfotransferase;protein_id=HBQ7388591.1;transl_table=11 DAFVNP010000005.1 tpg gene 9838 10539 . - . ID=gene-L8R42_000456;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=L8R42_000456 DAFVNP010000005.1 Protein Homology CDS 9838 10539 . - 0 ID=cds-HBQ7388592.1;Parent=gene-L8R42_000456;Dbxref=NCBI_GP:HBQ7388592.1;Name=HBQ7388592.1;gbkey=CDS;gene=fre;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=L8R42_000456;product=NAD(P)H-flavin reductase;protein_id=HBQ7388592.1;transl_table=11 DAFVNP010000005.1 tpg gene 10625 12103 . - . ID=gene-L8R42_000457;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=L8R42_000457 DAFVNP010000005.1 Protein Homology CDS 10625 12103 . - 0 ID=cds-HBQ7388593.1;Parent=gene-L8R42_000457;Dbxref=NCBI_GP:HBQ7388593.1;Name=HBQ7388593.1;gbkey=CDS;gene=ubiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=L8R42_000457;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=HBQ7388593.1;transl_table=11 DAFVNP010000005.1 tpg gene 12289 12777 . + . ID=gene-L8R42_000458;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=L8R42_000458 DAFVNP010000005.1 Protein Homology CDS 12289 12777 . + 0 ID=cds-HBQ7388594.1;Parent=gene-L8R42_000458;Dbxref=NCBI_GP:HBQ7388594.1;Name=HBQ7388594.1;gbkey=CDS;gene=rfaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=L8R42_000458;product=transcription/translation regulatory transformer protein RfaH;protein_id=HBQ7388594.1;transl_table=11 DAFVNP010000005.1 tpg gene 12785 13567 . - . ID=gene-L8R42_000459;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=L8R42_000459 DAFVNP010000005.1 Protein Homology CDS 12785 13567 . - 0 ID=cds-HBQ7388595.1;Parent=gene-L8R42_000459;Dbxref=NCBI_GP:HBQ7388595.1;Name=HBQ7388595.1;gbkey=CDS;gene=tatD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=L8R42_000459;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=HBQ7388595.1;transl_table=11 DAFVNP010000005.1 tpg gene 13609 14388 . - . ID=gene-L8R42_000460;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=L8R42_000460 DAFVNP010000005.1 Protein Homology CDS 13609 14388 . - 0 ID=cds-HBQ7388596.1;Parent=gene-L8R42_000460;Dbxref=NCBI_GP:HBQ7388596.1;Name=HBQ7388596.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=L8R42_000460;product=Sec-independent protein translocase subunit TatC;protein_id=HBQ7388596.1;transl_table=11 DAFVNP010000005.1 tpg gene 14391 14939 . - . ID=gene-L8R42_000461;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=L8R42_000461 DAFVNP010000005.1 Protein Homology CDS 14391 14939 . - 0 ID=cds-HBQ7388597.1;Parent=gene-L8R42_000461;Dbxref=NCBI_GP:HBQ7388597.1;Name=HBQ7388597.1;gbkey=CDS;gene=tatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=L8R42_000461;product=Sec-independent protein translocase subunit TatB;protein_id=HBQ7388597.1;transl_table=11 DAFVNP010000005.1 tpg gene 14943 15197 . - . ID=gene-L8R42_000462;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=L8R42_000462 DAFVNP010000005.1 Protein Homology CDS 14943 15197 . - 0 ID=cds-HBQ7388598.1;Parent=gene-L8R42_000462;Dbxref=NCBI_GP:HBQ7388598.1;Name=HBQ7388598.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=L8R42_000462;product=Sec-independent protein translocase subunit TatA;protein_id=HBQ7388598.1;transl_table=11 DAFVNP010000005.1 tpg gene 15403 17043 . - . ID=gene-L8R42_000463;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=L8R42_000463 DAFVNP010000005.1 Protein Homology CDS 15403 17043 . - 0 ID=cds-HBQ7388599.1;Parent=gene-L8R42_000463;Dbxref=NCBI_GP:HBQ7388599.1;Name=HBQ7388599.1;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=L8R42_000463;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=HBQ7388599.1;transl_table=11 DAFVNP010000005.1 tpg gene 17040 17645 . - . ID=gene-L8R42_000464;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=L8R42_000464 DAFVNP010000005.1 Protein Homology CDS 17040 17645 . - 0 ID=cds-HBQ7388600.1;Parent=gene-L8R42_000464;Dbxref=NCBI_GP:HBQ7388600.1;Name=HBQ7388600.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=L8R42_000464;product=ubiquinone biosynthesis protein UbiJ;protein_id=HBQ7388600.1;transl_table=11 DAFVNP010000005.1 tpg gene 17655 18410 . - . ID=gene-L8R42_000465;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=L8R42_000465 DAFVNP010000005.1 Protein Homology CDS 17655 18410 . - 0 ID=cds-HBQ7388601.1;Parent=gene-L8R42_000465;Dbxref=NCBI_GP:HBQ7388601.1;Name=HBQ7388601.1;gbkey=CDS;gene=ubiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=L8R42_000465;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=HBQ7388601.1;transl_table=11 DAFVNP010000005.1 tpg gene 18506 19936 . - . ID=gene-L8R42_000466;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=L8R42_000466 DAFVNP010000005.1 Protein Homology CDS 18506 19936 . - 0 ID=cds-HBQ7388602.1;Parent=gene-L8R42_000466;Dbxref=NCBI_GP:HBQ7388602.1;Name=HBQ7388602.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=L8R42_000466;product=DNA recombination protein RmuC;protein_id=HBQ7388602.1;transl_table=11 DAFVNP010000005.1 tpg gene 20076 20837 . - . ID=gene-L8R42_000467;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=L8R42_000467 DAFVNP010000005.1 Protein Homology CDS 20076 20837 . - 0 ID=cds-HBQ7388603.1;Parent=gene-L8R42_000467;Dbxref=NCBI_GP:HBQ7388603.1;Name=HBQ7388603.1;gbkey=CDS;gene=udp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=L8R42_000467;product=uridine phosphorylase;protein_id=HBQ7388603.1;transl_table=11 DAFVNP010000005.1 tpg gene 21096 21908 . + . ID=gene-L8R42_000468;Name=L8R42_000468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000468 DAFVNP010000005.1 Protein Homology CDS 21096 21908 . + 0 ID=cds-HBQ7388604.1;Parent=gene-L8R42_000468;Dbxref=NCBI_GP:HBQ7388604.1;Name=HBQ7388604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=L8R42_000468;product=dienelactone hydrolase family protein;protein_id=HBQ7388604.1;transl_table=11 DAFVNP010000005.1 tpg gene 21988 23331 . - . ID=gene-L8R42_000469;Name=L8R42_000469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000469 DAFVNP010000005.1 Protein Homology CDS 21988 23331 . - 0 ID=cds-HBQ7388605.1;Parent=gene-L8R42_000469;Dbxref=NCBI_GP:HBQ7388605.1;Name=HBQ7388605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=L8R42_000469;product=anaerobic sulfatase maturase;protein_id=HBQ7388605.1;transl_table=11 DAFVNP010000005.1 tpg gene 23666 25930 . - . ID=gene-L8R42_000470;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=L8R42_000470 DAFVNP010000005.1 Protein Homology CDS 23666 25930 . - 0 ID=cds-HBQ7388606.1;Parent=gene-L8R42_000470;Dbxref=NCBI_GP:HBQ7388606.1;Name=HBQ7388606.1;gbkey=CDS;gene=metE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=L8R42_000470;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=HBQ7388606.1;transl_table=11 DAFVNP010000005.1 tpg gene 26179 27132 . + . ID=gene-L8R42_000471;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=L8R42_000471 DAFVNP010000005.1 Protein Homology CDS 26179 27132 . + 0 ID=cds-HBQ7388607.1;Parent=gene-L8R42_000471;Dbxref=NCBI_GP:HBQ7388607.1;Name=HBQ7388607.1;gbkey=CDS;gene=metR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=L8R42_000471;product=HTH-type transcriptional regulator MetR;protein_id=HBQ7388607.1;transl_table=11 DAFVNP010000005.1 tpg gene 27020 27919 . - . ID=gene-L8R42_000472;Name=L8R42_000472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000472 DAFVNP010000005.1 Protein Homology CDS 27020 27919 . - 0 ID=cds-HBQ7388608.1;Parent=gene-L8R42_000472;Dbxref=NCBI_GP:HBQ7388608.1;Name=HBQ7388608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=L8R42_000472;product=DMT family transporter;protein_id=HBQ7388608.1;transl_table=11 DAFVNP010000005.1 tpg gene 28000 28800 . - . ID=gene-L8R42_000473;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=L8R42_000473 DAFVNP010000005.1 Protein Homology CDS 28000 28800 . - 0 ID=cds-HBQ7388609.1;Parent=gene-L8R42_000473;Dbxref=NCBI_GP:HBQ7388609.1;Name=HBQ7388609.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=L8R42_000473;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=HBQ7388609.1;transl_table=11 DAFVNP010000005.1 tpg gene 28816 29832 . - . ID=gene-L8R42_000474;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=L8R42_000474 DAFVNP010000005.1 Protein Homology CDS 28816 29832 . - 0 ID=cds-HBQ7388610.1;Parent=gene-L8R42_000474;Dbxref=NCBI_GP:HBQ7388610.1;Name=HBQ7388610.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=L8R42_000474;product=lysophospholipase L2;protein_id=HBQ7388610.1;transl_table=11 DAFVNP010000005.1 tpg gene 29943 30563 . + . ID=gene-L8R42_000475;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=L8R42_000475 DAFVNP010000005.1 Protein Homology CDS 29943 30563 . + 0 ID=cds-HBQ7388611.1;Parent=gene-L8R42_000475;Dbxref=NCBI_GP:HBQ7388611.1;Name=HBQ7388611.1;gbkey=CDS;gene=rhtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=L8R42_000475;product=homoserine/homoserine lactone efflux protein;protein_id=HBQ7388611.1;transl_table=11 DAFVNP010000005.1 tpg gene 30603 31223 . - . ID=gene-L8R42_000476;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=L8R42_000476 DAFVNP010000005.1 Protein Homology CDS 30603 31223 . - 0 ID=cds-HBQ7388612.1;Parent=gene-L8R42_000476;Dbxref=NCBI_GP:HBQ7388612.1;Name=HBQ7388612.1;gbkey=CDS;gene=rhtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=L8R42_000476;product=threonine export protein RhtC;protein_id=HBQ7388612.1;transl_table=11 DAFVNP010000005.1 tpg gene 31287 33116 . - . ID=gene-L8R42_000477;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=L8R42_000477 DAFVNP010000005.1 Protein Homology CDS 31287 33116 . - 0 ID=cds-HBQ7388613.1;Parent=gene-L8R42_000477;Dbxref=NCBI_GP:HBQ7388613.1;Name=HBQ7388613.1;gbkey=CDS;gene=recQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=L8R42_000477;product=ATP-dependent DNA helicase RecQ;protein_id=HBQ7388613.1;transl_table=11 DAFVNP010000005.1 tpg gene 33200 34069 . - . ID=gene-L8R42_000478;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=L8R42_000478 DAFVNP010000005.1 Protein Homology CDS 33200 34069 . - 0 ID=cds-HBQ7388614.1;Parent=gene-L8R42_000478;Dbxref=NCBI_GP:HBQ7388614.1;Name=HBQ7388614.1;gbkey=CDS;gene=pldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=L8R42_000478;product=phospholipase A;protein_id=HBQ7388614.1;transl_table=11 DAFVNP010000005.1 tpg gene 34234 34701 . + . ID=gene-L8R42_000479;Name=L8R42_000479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000479 DAFVNP010000005.1 Protein Homology CDS 34234 34701 . + 0 ID=cds-HBQ7388615.1;Parent=gene-L8R42_000479;Dbxref=NCBI_GP:HBQ7388615.1;Name=HBQ7388615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=L8R42_000479;product=thioesterase family protein;protein_id=HBQ7388615.1;transl_table=11 DAFVNP010000005.1 tpg gene 34745 35629 . + . ID=gene-L8R42_000480;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=L8R42_000480 DAFVNP010000005.1 Protein Homology CDS 34745 35629 . + 0 ID=cds-HBQ7388616.1;Parent=gene-L8R42_000480;Dbxref=NCBI_GP:HBQ7388616.1;Name=HBQ7388616.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462840.1;locus_tag=L8R42_000480;product=EamA family transporter RarD;protein_id=HBQ7388616.1;transl_table=11 DAFVNP010000005.1 tpg gene 35664 36122 . + . ID=gene-L8R42_000481;Name=L8R42_000481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000481 DAFVNP010000005.1 Protein Homology CDS 35664 36122 . + 0 ID=cds-HBQ7388617.1;Parent=gene-L8R42_000481;Dbxref=NCBI_GP:HBQ7388617.1;Name=HBQ7388617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462839.1;locus_tag=L8R42_000481;product=hypothetical protein;protein_id=HBQ7388617.1;transl_table=11 DAFVNP010000005.1 tpg gene 36138 36518 . + . ID=gene-L8R42_000482;Name=L8R42_000482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000482 DAFVNP010000005.1 Protein Homology CDS 36138 36518 . + 0 ID=cds-HBQ7388618.1;Parent=gene-L8R42_000482;Dbxref=NCBI_GP:HBQ7388618.1;Name=HBQ7388618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462838.1;locus_tag=L8R42_000482;product=DUF2628 domain-containing protein;protein_id=HBQ7388618.1;transl_table=11 DAFVNP010000005.1 tpg gene 36567 37517 . - . ID=gene-L8R42_000483;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=L8R42_000483 DAFVNP010000005.1 Protein Homology CDS 36567 37517 . - 0 ID=cds-HBQ7388619.1;Parent=gene-L8R42_000483;Dbxref=NCBI_GP:HBQ7388619.1;Name=HBQ7388619.1;gbkey=CDS;gene=corA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=L8R42_000483;product=magnesium/cobalt transporter CorA;protein_id=HBQ7388619.1;transl_table=11 DAFVNP010000005.1 tpg gene 37989 40151 . - . ID=gene-L8R42_000484;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=L8R42_000484 DAFVNP010000005.1 Protein Homology CDS 37989 40151 . - 0 ID=cds-HBQ7388620.1;Parent=gene-L8R42_000484;Dbxref=NCBI_GP:HBQ7388620.1;Name=HBQ7388620.1;gbkey=CDS;gene=uvrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=L8R42_000484;product=DNA helicase II;protein_id=HBQ7388620.1;transl_table=11 DAFVNP010000005.1 tpg gene 40287 41003 . - . ID=gene-L8R42_000485;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=L8R42_000485 DAFVNP010000005.1 Protein Homology CDS 40287 41003 . - 0 ID=cds-HBQ7388621.1;Parent=gene-L8R42_000485;Dbxref=NCBI_GP:HBQ7388621.1;Name=HBQ7388621.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=L8R42_000485;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=HBQ7388621.1;transl_table=11 DAFVNP010000005.1 tpg gene 41003 41905 . - . ID=gene-L8R42_000486;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=L8R42_000486 DAFVNP010000005.1 Protein Homology CDS 41003 41905 . - 0 ID=cds-HBQ7388622.1;Parent=gene-L8R42_000486;Dbxref=NCBI_GP:HBQ7388622.1;Name=HBQ7388622.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=L8R42_000486;product=tyrosine recombinase XerC;protein_id=HBQ7388622.1;transl_table=11 DAFVNP010000005.1 tpg gene 41902 42609 . - . ID=gene-L8R42_000487;Name=L8R42_000487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000487 DAFVNP010000005.1 Protein Homology CDS 41902 42609 . - 0 ID=cds-HBQ7388623.1;Parent=gene-L8R42_000487;Dbxref=NCBI_GP:HBQ7388623.1;Name=HBQ7388623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=L8R42_000487;product=DUF484 domain-containing protein;protein_id=HBQ7388623.1;transl_table=11 DAFVNP010000005.1 tpg gene 42606 43430 . - . ID=gene-L8R42_000488;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=L8R42_000488 DAFVNP010000005.1 Protein Homology CDS 42606 43430 . - 0 ID=cds-HBQ7388624.1;Parent=gene-L8R42_000488;Dbxref=NCBI_GP:HBQ7388624.1;Name=HBQ7388624.1;gbkey=CDS;gene=dapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=L8R42_000488;product=diaminopimelate epimerase;protein_id=HBQ7388624.1;transl_table=11 DAFVNP010000005.1 tpg gene 43467 43670 . - . ID=gene-L8R42_000489;Name=L8R42_000489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000489 DAFVNP010000005.1 Protein Homology CDS 43467 43670 . - 0 ID=cds-HBQ7388625.1;Parent=gene-L8R42_000489;Dbxref=NCBI_GP:HBQ7388625.1;Name=HBQ7388625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=L8R42_000489;product=lipoprotein;protein_id=HBQ7388625.1;transl_table=11 DAFVNP010000005.1 tpg gene 43856 44107 . + . ID=gene-L8R42_000490;Name=L8R42_000490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000490 DAFVNP010000005.1 GeneMarkS-2+ CDS 43856 44107 . + 0 ID=cds-HBQ7388626.1;Parent=gene-L8R42_000490;Dbxref=NCBI_GP:HBQ7388626.1;Name=HBQ7388626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_000490;product=hypothetical protein;protein_id=HBQ7388626.1;transl_table=11 DAFVNP010000005.1 tpg pseudogene 44017 44379 . + . ID=gene-L8R42_000491;Name=L8R42_000491;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_000491;pseudo=true DAFVNP010000005.1 Protein Homology CDS 44017 44379 . + 0 ID=cds-L8R42_000491;Parent=gene-L8R42_000491;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=L8R42_000491;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000005.1 tpg gene 44367 44756 . + . ID=gene-L8R42_000492;Name=L8R42_000492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000492 DAFVNP010000005.1 Protein Homology CDS 44367 44756 . + 0 ID=cds-HBQ7388627.1;Parent=gene-L8R42_000492;Dbxref=NCBI_GP:HBQ7388627.1;Name=HBQ7388627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=L8R42_000492;product=DUF3021 family protein;protein_id=HBQ7388627.1;transl_table=11 DAFVNP010000005.1 tpg gene 44826 45146 . + . ID=gene-L8R42_000493;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=L8R42_000493 DAFVNP010000005.1 Protein Homology CDS 44826 45146 . + 0 ID=cds-HBQ7388628.1;Parent=gene-L8R42_000493;Dbxref=NCBI_GP:HBQ7388628.1;Name=HBQ7388628.1;gbkey=CDS;gene=cyaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=L8R42_000493;product=iron donor protein CyaY;protein_id=HBQ7388628.1;transl_table=11 DAFVNP010000005.1 tpg gene 45217 45579 . - . ID=gene-L8R42_000494;Name=L8R42_000494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000494 DAFVNP010000005.1 Protein Homology CDS 45217 45579 . - 0 ID=cds-HBQ7388629.1;Parent=gene-L8R42_000494;Dbxref=NCBI_GP:HBQ7388629.1;Name=HBQ7388629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462828.1;locus_tag=L8R42_000494;product=hypothetical protein;protein_id=HBQ7388629.1;transl_table=11 DAFVNP010000005.1 tpg gene 45591 46133 . - . ID=gene-L8R42_000495;Name=L8R42_000495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000495 DAFVNP010000005.1 Protein Homology CDS 45591 46133 . - 0 ID=cds-HBQ7388630.1;Parent=gene-L8R42_000495;Dbxref=NCBI_GP:HBQ7388630.1;Name=HBQ7388630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462827.1;locus_tag=L8R42_000495;product=hypothetical protein;protein_id=HBQ7388630.1;transl_table=11 DAFVNP010000005.1 tpg gene 46319 46675 . - . ID=gene-L8R42_000496;Name=L8R42_000496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000496 DAFVNP010000005.1 Protein Homology CDS 46319 46675 . - 0 ID=cds-HBQ7388631.1;Parent=gene-L8R42_000496;Dbxref=NCBI_GP:HBQ7388631.1;Name=HBQ7388631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462826.1;locus_tag=L8R42_000496;product=hypothetical protein;protein_id=HBQ7388631.1;transl_table=11 DAFVNP010000005.1 tpg gene 46783 49329 . - . ID=gene-L8R42_000497;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=L8R42_000497 DAFVNP010000005.1 Protein Homology CDS 46783 49329 . - 0 ID=cds-HBQ7388632.1;Parent=gene-L8R42_000497;Dbxref=NCBI_GP:HBQ7388632.1;Name=HBQ7388632.1;gbkey=CDS;gene=cyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=L8R42_000497;product=class I adenylate cyclase;protein_id=HBQ7388632.1;transl_table=11 DAFVNP010000005.1 tpg gene 49706 50647 . + . ID=gene-L8R42_000498;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=L8R42_000498 DAFVNP010000005.1 Protein Homology CDS 49706 50647 . + 0 ID=cds-HBQ7388633.1;Parent=gene-L8R42_000498;Dbxref=NCBI_GP:HBQ7388633.1;Name=HBQ7388633.1;gbkey=CDS;gene=hemC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=L8R42_000498;product=hydroxymethylbilane synthase;protein_id=HBQ7388633.1;transl_table=11 DAFVNP010000005.1 tpg gene 50644 51384 . + . ID=gene-L8R42_000499;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=L8R42_000499 DAFVNP010000005.1 Protein Homology CDS 50644 51384 . + 0 ID=cds-HBQ7388634.1;Parent=gene-L8R42_000499;Dbxref=NCBI_GP:HBQ7388634.1;Name=HBQ7388634.1;gbkey=CDS;gene=hemD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=L8R42_000499;product=uroporphyrinogen-III synthase;protein_id=HBQ7388634.1;transl_table=11 DAFVNP010000005.1 tpg gene 51406 52575 . + . ID=gene-L8R42_000500;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=L8R42_000500 DAFVNP010000005.1 Protein Homology CDS 51406 52575 . + 0 ID=cds-HBQ7388635.1;Parent=gene-L8R42_000500;Dbxref=NCBI_GP:HBQ7388635.1;Name=HBQ7388635.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=L8R42_000500;product=uroporphyrinogen-III C-methyltransferase;protein_id=HBQ7388635.1;transl_table=11 DAFVNP010000005.1 tpg gene 52578 53774 . + . ID=gene-L8R42_000501;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=L8R42_000501 DAFVNP010000005.1 Protein Homology CDS 52578 53774 . + 0 ID=cds-HBQ7388636.1;Parent=gene-L8R42_000501;Dbxref=NCBI_GP:HBQ7388636.1;Name=HBQ7388636.1;gbkey=CDS;gene=hemY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=L8R42_000501;product=protoheme IX biogenesis protein HemY;protein_id=HBQ7388636.1;transl_table=11 DAFVNP010000005.1 tpg gene 54356 54432 . - . ID=gene-L8R42_000502;Name=L8R42_000502;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000502 DAFVNP010000005.1 tRNAscan-SE tRNA 54356 54432 . - . ID=rna-L8R42_000502;Parent=gene-L8R42_000502;anticodon=(pos:complement(54396..54398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000502;product=tRNA-Pro DAFVNP010000005.1 tRNAscan-SE exon 54356 54432 . - . ID=exon-L8R42_000502-1;Parent=rna-L8R42_000502;anticodon=(pos:complement(54396..54398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000502;product=tRNA-Pro DAFVNP010000005.1 tpg gene 54475 54561 . - . ID=gene-L8R42_000503;Name=L8R42_000503;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000503 DAFVNP010000005.1 tRNAscan-SE tRNA 54475 54561 . - . ID=rna-L8R42_000503;Parent=gene-L8R42_000503;anticodon=(pos:complement(54525..54527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000503;product=tRNA-Leu DAFVNP010000005.1 tRNAscan-SE exon 54475 54561 . - . ID=exon-L8R42_000503-1;Parent=rna-L8R42_000503;anticodon=(pos:complement(54525..54527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000503;product=tRNA-Leu DAFVNP010000005.1 tpg gene 54582 54657 . - . ID=gene-L8R42_000504;Name=L8R42_000504;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000504 DAFVNP010000005.1 tRNAscan-SE tRNA 54582 54657 . - . ID=rna-L8R42_000504;Parent=gene-L8R42_000504;anticodon=(pos:complement(54622..54624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000504;product=tRNA-His DAFVNP010000005.1 tRNAscan-SE exon 54582 54657 . - . ID=exon-L8R42_000504-1;Parent=rna-L8R42_000504;anticodon=(pos:complement(54622..54624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000504;product=tRNA-His DAFVNP010000005.1 tpg gene 54712 54788 . - . ID=gene-L8R42_000505;Name=L8R42_000505;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000505 DAFVNP010000005.1 tRNAscan-SE tRNA 54712 54788 . - . ID=rna-L8R42_000505;Parent=gene-L8R42_000505;anticodon=(pos:complement(54752..54754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000505;product=tRNA-Arg DAFVNP010000005.1 tRNAscan-SE exon 54712 54788 . - . ID=exon-L8R42_000505-1;Parent=rna-L8R42_000505;anticodon=(pos:complement(54752..54754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000505;product=tRNA-Arg DAFVNP010000005.1 tpg gene 54891 56276 . - . ID=gene-L8R42_000506;Name=L8R42_000506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000506 DAFVNP010000005.1 Protein Homology CDS 54891 56276 . - 0 ID=cds-HBQ7388637.1;Parent=gene-L8R42_000506;Dbxref=NCBI_GP:HBQ7388637.1;Name=HBQ7388637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=L8R42_000506;product=amino acid permease;protein_id=HBQ7388637.1;transl_table=11 DAFVNP010000005.1 tpg gene 56483 57223 . - . ID=gene-L8R42_000507;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=L8R42_000507 DAFVNP010000005.1 Protein Homology CDS 56483 57223 . - 0 ID=cds-HBQ7388638.1;Parent=gene-L8R42_000507;Dbxref=NCBI_GP:HBQ7388638.1;Name=HBQ7388638.1;gbkey=CDS;gene=rffM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=L8R42_000507;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=HBQ7388638.1;transl_table=11 DAFVNP010000005.1 tpg gene 57220 58578 . - . ID=gene-L8R42_000508;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=L8R42_000508 DAFVNP010000005.1 Protein Homology CDS 57220 58578 . - 0 ID=cds-HBQ7388639.1;Parent=gene-L8R42_000508;Dbxref=NCBI_GP:HBQ7388639.1;Name=HBQ7388639.1;gbkey=CDS;gene=wzyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=L8R42_000508;product=ECA oligosaccharide polymerase;protein_id=HBQ7388639.1;transl_table=11 DAFVNP010000005.1 tpg gene 58575 59654 . - . ID=gene-L8R42_000509;Name=L8R42_000509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000509 DAFVNP010000005.1 Protein Homology CDS 58575 59654 . - 0 ID=cds-HBQ7388640.1;Parent=gene-L8R42_000509;Dbxref=NCBI_GP:HBQ7388640.1;Name=HBQ7388640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=L8R42_000509;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=HBQ7388640.1;transl_table=11 DAFVNP010000005.1 tpg gene 59651 60901 . - . ID=gene-L8R42_000510;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=L8R42_000510 DAFVNP010000005.1 Protein Homology CDS 59651 60901 . - 0 ID=cds-HBQ7388641.1;Parent=gene-L8R42_000510;Dbxref=NCBI_GP:HBQ7388641.1;Name=HBQ7388641.1;gbkey=CDS;gene=wzxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=L8R42_000510;product=lipid III flippase WzxE;protein_id=HBQ7388641.1;transl_table=11 DAFVNP010000005.1 tpg gene 60903 62033 . - . ID=gene-L8R42_000511;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=L8R42_000511 DAFVNP010000005.1 Protein Homology CDS 60903 62033 . - 0 ID=cds-HBQ7388642.1;Parent=gene-L8R42_000511;Dbxref=NCBI_GP:HBQ7388642.1;Name=HBQ7388642.1;gbkey=CDS;gene=rffA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=L8R42_000511;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=HBQ7388642.1;transl_table=11 DAFVNP010000005.1 tpg gene 62038 62715 . - . ID=gene-L8R42_000512;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=L8R42_000512 DAFVNP010000005.1 Protein Homology CDS 62038 62715 . - 0 ID=cds-HBQ7388643.1;Parent=gene-L8R42_000512;Dbxref=NCBI_GP:HBQ7388643.1;Name=HBQ7388643.1;gbkey=CDS;gene=rffC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=L8R42_000512;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=HBQ7388643.1;transl_table=11 DAFVNP010000005.1 tpg gene 62693 62917 . - . ID=gene-L8R42_000513;Name=L8R42_000513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000513 DAFVNP010000005.1 Protein Homology CDS 62693 62917 . - 0 ID=cds-HBQ7388644.1;Parent=gene-L8R42_000513;Dbxref=NCBI_GP:HBQ7388644.1;Name=HBQ7388644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658205.1;locus_tag=L8R42_000513;product=sugar nucleotidyltransferase;protein_id=HBQ7388644.1;transl_table=11 DAFVNP010000005.1 tpg gene 62950 64017 . - . ID=gene-L8R42_000514;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=L8R42_000514 DAFVNP010000005.1 Protein Homology CDS 62950 64017 . - 0 ID=cds-HBQ7388645.1;Parent=gene-L8R42_000514;Dbxref=NCBI_GP:HBQ7388645.1;Name=HBQ7388645.1;gbkey=CDS;gene=rffG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=L8R42_000514;product=dTDP-glucose 4%2C6-dehydratase;protein_id=HBQ7388645.1;transl_table=11 DAFVNP010000005.1 tpg gene 64017 65279 . - . ID=gene-L8R42_000515;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=L8R42_000515 DAFVNP010000005.1 Protein Homology CDS 64017 65279 . - 0 ID=cds-HBQ7388646.1;Parent=gene-L8R42_000515;Dbxref=NCBI_GP:HBQ7388646.1;Name=HBQ7388646.1;gbkey=CDS;gene=wecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=L8R42_000515;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=HBQ7388646.1;transl_table=11 DAFVNP010000005.1 tpg gene 65276 66406 . - . ID=gene-L8R42_000516;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=L8R42_000516 DAFVNP010000005.1 Protein Homology CDS 65276 66406 . - 0 ID=cds-HBQ7388647.1;Parent=gene-L8R42_000516;Dbxref=NCBI_GP:HBQ7388647.1;Name=HBQ7388647.1;gbkey=CDS;gene=wecB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=L8R42_000516;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=HBQ7388647.1;transl_table=11 DAFVNP010000005.1 tpg gene 66462 67508 . - . ID=gene-L8R42_000517;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=L8R42_000517 DAFVNP010000005.1 Protein Homology CDS 66462 67508 . - 0 ID=cds-HBQ7388648.1;Parent=gene-L8R42_000517;Dbxref=NCBI_GP:HBQ7388648.1;Name=HBQ7388648.1;gbkey=CDS;gene=wzzE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=L8R42_000517;product=ECA polysaccharide chain length modulation protein;protein_id=HBQ7388648.1;transl_table=11 DAFVNP010000005.1 tpg gene 67520 68623 . - . ID=gene-L8R42_000518;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=L8R42_000518 DAFVNP010000005.1 Protein Homology CDS 67520 68623 . - 0 ID=cds-HBQ7388649.1;Parent=gene-L8R42_000518;Dbxref=NCBI_GP:HBQ7388649.1;Name=HBQ7388649.1;gbkey=CDS;gene=wecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=L8R42_000518;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=HBQ7388649.1;transl_table=11 DAFVNP010000005.1 tpg gene 68853 70112 . - . ID=gene-L8R42_000519;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=L8R42_000519 DAFVNP010000005.1 Protein Homology CDS 68853 70112 . - 0 ID=cds-HBQ7388650.1;Parent=gene-L8R42_000519;Dbxref=NCBI_GP:HBQ7388650.1;Name=HBQ7388650.1;gbkey=CDS;gene=rho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=L8R42_000519;product=transcription termination factor Rho;protein_id=HBQ7388650.1;transl_table=11 DAFVNP010000005.1 tpg gene 70200 70334 . - . ID=gene-L8R42_000520;Name=L8R42_000520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000520 DAFVNP010000005.1 Protein Homology CDS 70200 70334 . - 0 ID=cds-HBQ7388651.1;Parent=gene-L8R42_000520;Dbxref=NCBI_GP:HBQ7388651.1;Name=HBQ7388651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=L8R42_000520;product=rho operon leader peptide;protein_id=HBQ7388651.1;transl_table=11 DAFVNP010000005.1 tpg gene 70531 70860 . - . ID=gene-L8R42_000521;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=L8R42_000521 DAFVNP010000005.1 Protein Homology CDS 70531 70860 . - 0 ID=cds-HBQ7388652.1;Parent=gene-L8R42_000521;Dbxref=NCBI_GP:HBQ7388652.1;Name=HBQ7388652.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=L8R42_000521;product=thioredoxin TrxA;protein_id=HBQ7388652.1;transl_table=11 DAFVNP010000005.1 tpg gene 71004 72269 . + . ID=gene-L8R42_000522;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=L8R42_000522 DAFVNP010000005.1 Protein Homology CDS 71004 72269 . + 0 ID=cds-HBQ7388653.1;Parent=gene-L8R42_000522;Dbxref=NCBI_GP:HBQ7388653.1;Name=HBQ7388653.1;gbkey=CDS;gene=rhlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=L8R42_000522;product=ATP-dependent RNA helicase RhlB;protein_id=HBQ7388653.1;transl_table=11 DAFVNP010000005.1 tpg gene 72388 73869 . + . ID=gene-L8R42_000523;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=L8R42_000523 DAFVNP010000005.1 Protein Homology CDS 72388 73869 . + 0 ID=cds-HBQ7388654.1;Parent=gene-L8R42_000523;Dbxref=NCBI_GP:HBQ7388654.1;Name=HBQ7388654.1;gbkey=CDS;gene=gppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=L8R42_000523;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=HBQ7388654.1;transl_table=11 DAFVNP010000005.1 tpg gene 73909 75933 . - . ID=gene-L8R42_000524;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=L8R42_000524 DAFVNP010000005.1 Protein Homology CDS 73909 75933 . - 0 ID=cds-HBQ7388655.1;Parent=gene-L8R42_000524;Dbxref=NCBI_GP:HBQ7388655.1;Name=HBQ7388655.1;gbkey=CDS;gene=rep;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=L8R42_000524;product=DNA helicase Rep;protein_id=HBQ7388655.1;transl_table=11 DAFVNP010000005.1 tpg gene 76033 76761 . - . ID=gene-L8R42_000525;Name=L8R42_000525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000525 DAFVNP010000005.1 Protein Homology CDS 76033 76761 . - 0 ID=cds-HBQ7388656.1;Parent=gene-L8R42_000525;Dbxref=NCBI_GP:HBQ7388656.1;Name=HBQ7388656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=L8R42_000525;product=nicotinamide riboside transporter PnuC;protein_id=HBQ7388656.1;transl_table=11 DAFVNP010000005.1 tpg gene 76761 77504 . - . ID=gene-L8R42_000526;Name=L8R42_000526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000526 DAFVNP010000005.1 Protein Homology CDS 76761 77504 . - 0 ID=cds-HBQ7388657.1;Parent=gene-L8R42_000526;Dbxref=NCBI_GP:HBQ7388657.1;Name=HBQ7388657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182423.1;locus_tag=L8R42_000526;product=nucleoside phosphorylase;protein_id=HBQ7388657.1;transl_table=11 DAFVNP010000005.1 tpg gene 77533 78234 . - . ID=gene-L8R42_000527;Name=L8R42_000527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000527 DAFVNP010000005.1 Protein Homology CDS 77533 78234 . - 0 ID=cds-HBQ7388658.1;Parent=gene-L8R42_000527;Dbxref=NCBI_GP:HBQ7388658.1;Name=HBQ7388658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127355.1;locus_tag=L8R42_000527;product=Crp/Fnr family transcriptional regulator;protein_id=HBQ7388658.1;transl_table=11 DAFVNP010000005.1 tpg gene 78428 78709 . + . ID=gene-L8R42_000528;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=L8R42_000528 DAFVNP010000005.1 Protein Homology CDS 78428 78709 . + 0 ID=cds-HBQ7388659.1;Parent=gene-L8R42_000528;Dbxref=NCBI_GP:HBQ7388659.1;Name=HBQ7388659.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=L8R42_000528;product=peptidylprolyl isomerase PpiC;protein_id=HBQ7388659.1;transl_table=11 DAFVNP010000005.1 tpg gene 78803 80278 . - . ID=gene-L8R42_000529;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=L8R42_000529 DAFVNP010000005.1 Protein Homology CDS 78803 80278 . - 0 ID=cds-HBQ7388660.1;Parent=gene-L8R42_000529;Dbxref=NCBI_GP:HBQ7388660.1;Name=HBQ7388660.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=L8R42_000529;product=ketol-acid reductoisomerase;protein_id=HBQ7388660.1;transl_table=11 DAFVNP010000005.1 tpg gene 80442 81329 . + . ID=gene-L8R42_000530;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=L8R42_000530 DAFVNP010000005.1 Protein Homology CDS 80442 81329 . + 0 ID=cds-HBQ7388661.1;Parent=gene-L8R42_000530;Dbxref=NCBI_GP:HBQ7388661.1;Name=HBQ7388661.1;gbkey=CDS;gene=ilvY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530887.1;locus_tag=L8R42_000530;product=HTH-type transcriptional activator IlvY;protein_id=HBQ7388661.1;transl_table=11 DAFVNP010000005.1 tpg gene 81342 81731 . + . ID=gene-L8R42_000531;Name=L8R42_000531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000531 DAFVNP010000005.1 Protein Homology CDS 81342 81731 . + 0 ID=cds-HBQ7388662.1;Parent=gene-L8R42_000531;Dbxref=NCBI_GP:HBQ7388662.1;Name=HBQ7388662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259310.1;locus_tag=L8R42_000531;product=hypothetical protein;protein_id=HBQ7388662.1;transl_table=11 DAFVNP010000005.1 tpg gene 81745 82119 . + . ID=gene-L8R42_000532;Name=L8R42_000532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000532 DAFVNP010000005.1 Protein Homology CDS 81745 82119 . + 0 ID=cds-HBQ7388663.1;Parent=gene-L8R42_000532;Dbxref=NCBI_GP:HBQ7388663.1;Name=HBQ7388663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000937044.1;locus_tag=L8R42_000532;product=hypothetical protein;protein_id=HBQ7388663.1;transl_table=11 DAFVNP010000005.1 tpg gene 82130 82831 . - . ID=gene-L8R42_000533;Name=L8R42_000533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000533 DAFVNP010000005.1 Protein Homology CDS 82130 82831 . - 0 ID=cds-HBQ7388664.1;Parent=gene-L8R42_000533;Dbxref=NCBI_GP:HBQ7388664.1;Name=HBQ7388664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929969.1;locus_tag=L8R42_000533;product=DUF2461 domain-containing protein;protein_id=HBQ7388664.1;transl_table=11 DAFVNP010000005.1 tpg gene 82937 84481 . - . ID=gene-L8R42_000534;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=L8R42_000534 DAFVNP010000005.1 Protein Homology CDS 82937 84481 . - 0 ID=cds-HBQ7388665.1;Parent=gene-L8R42_000534;Dbxref=NCBI_GP:HBQ7388665.1;Name=HBQ7388665.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=L8R42_000534;product=threonine ammonia-lyase%2C biosynthetic;protein_id=HBQ7388665.1;transl_table=11 DAFVNP010000005.1 tpg gene 84484 86334 . - . ID=gene-L8R42_000535;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=L8R42_000535 DAFVNP010000005.1 Protein Homology CDS 84484 86334 . - 0 ID=cds-HBQ7388666.1;Parent=gene-L8R42_000535;Dbxref=NCBI_GP:HBQ7388666.1;Name=HBQ7388666.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=L8R42_000535;product=dihydroxy-acid dehydratase;protein_id=HBQ7388666.1;transl_table=11 DAFVNP010000005.1 tpg gene 86494 87423 . - . ID=gene-L8R42_000536;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=L8R42_000536 DAFVNP010000005.1 Protein Homology CDS 86494 87423 . - 0 ID=cds-HBQ7388667.1;Parent=gene-L8R42_000536;Dbxref=NCBI_GP:HBQ7388667.1;Name=HBQ7388667.1;gbkey=CDS;gene=ilvE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=L8R42_000536;product=branched-chain-amino-acid transaminase;protein_id=HBQ7388667.1;transl_table=11 DAFVNP010000005.1 tpg gene 87441 87704 . - . ID=gene-L8R42_000537;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=L8R42_000537 DAFVNP010000005.1 Protein Homology CDS 87441 87704 . - 0 ID=cds-HBQ7388668.1;Parent=gene-L8R42_000537;Dbxref=NCBI_GP:HBQ7388668.1;Name=HBQ7388668.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=L8R42_000537;product=acetolactate synthase 2 small subunit;protein_id=HBQ7388668.1;transl_table=11 DAFVNP010000005.1 tpg gene 87701 89347 . - . ID=gene-L8R42_000538;Name=L8R42_000538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000538 DAFVNP010000005.1 Protein Homology CDS 87701 89347 . - 0 ID=cds-HBQ7388669.1;Parent=gene-L8R42_000538;Dbxref=NCBI_GP:HBQ7388669.1;Name=HBQ7388669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=L8R42_000538;product=acetolactate synthase 2 catalytic subunit;protein_id=HBQ7388669.1;transl_table=11 DAFVNP010000005.1 tpg gene 89350 89400 . - . ID=gene-L8R42_000539;Name=L8R42_000539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000539 DAFVNP010000005.1 Protein Homology CDS 89350 89400 . - 0 ID=cds-HBQ7388670.1;Parent=gene-L8R42_000539;Dbxref=NCBI_GP:HBQ7388670.1;Name=HBQ7388670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=L8R42_000539;product=hypothetical protein;protein_id=HBQ7388670.1;transl_table=11 DAFVNP010000005.1 tpg gene 89487 89585 . - . ID=gene-L8R42_000540;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=L8R42_000540 DAFVNP010000005.1 Protein Homology CDS 89487 89585 . - 0 ID=cds-HBQ7388671.1;Parent=gene-L8R42_000540;Dbxref=NCBI_GP:HBQ7388671.1;Name=HBQ7388671.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=L8R42_000540;product=ilv operon leader peptide;protein_id=HBQ7388671.1;transl_table=11 DAFVNP010000005.1 tpg gene 89936 91456 . + . ID=gene-L8R42_000541;Name=L8R42_000541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000541 DAFVNP010000005.1 Protein Homology CDS 89936 91456 . + 0 ID=cds-HBQ7388672.1;Parent=gene-L8R42_000541;Dbxref=NCBI_GP:HBQ7388672.1;Name=HBQ7388672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=L8R42_000541;product=YifB family Mg chelatase-like AAA ATPase;protein_id=HBQ7388672.1;transl_table=11 DAFVNP010000005.1 tpg gene 91481 91819 . - . ID=gene-L8R42_000542;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=L8R42_000542 DAFVNP010000005.1 Protein Homology CDS 91481 91819 . - 0 ID=cds-HBQ7388673.1;Parent=gene-L8R42_000542;Dbxref=NCBI_GP:HBQ7388673.1;Name=HBQ7388673.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=L8R42_000542;product=macrodomain Ori organization protein MaoP;protein_id=HBQ7388673.1;transl_table=11 DAFVNP010000005.1 tpg gene 91926 92774 . + . ID=gene-L8R42_000543;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=L8R42_000543 DAFVNP010000005.1 Protein Homology CDS 91926 92774 . + 0 ID=cds-HBQ7388674.1;Parent=gene-L8R42_000543;Dbxref=NCBI_GP:HBQ7388674.1;Name=HBQ7388674.1;gbkey=CDS;gene=hdfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=L8R42_000543;product=HTH-type transcriptional regulator HdfR;protein_id=HBQ7388674.1;transl_table=11 DAFVNP010000005.1 tpg gene 92876 92951 . - . ID=gene-L8R42_000544;Name=L8R42_000544;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000544 DAFVNP010000005.1 tRNAscan-SE tRNA 92876 92951 . - . ID=rna-L8R42_000544;Parent=gene-L8R42_000544;anticodon=(pos:complement(92916..92918));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000544;product=tRNA-Trp DAFVNP010000005.1 tRNAscan-SE exon 92876 92951 . - . ID=exon-L8R42_000544-1;Parent=rna-L8R42_000544;anticodon=(pos:complement(92916..92918));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000544;product=tRNA-Trp ##sequence-region DAFVNP010000006.1 1 90614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000006.1 tpg region 1 90614 . + . ID=DAFVNP010000006.1:1..90614;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000006.1 tpg gene 734 1672 . + . ID=gene-L8R42_000545;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=L8R42_000545 DAFVNP010000006.1 Protein Homology CDS 734 1672 . + 0 ID=cds-HBQ7388675.1;Parent=gene-L8R42_000545;Dbxref=NCBI_GP:HBQ7388675.1;Name=HBQ7388675.1;gbkey=CDS;gene=tdcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=L8R42_000545;product=transcriptional regulator TdcA;protein_id=HBQ7388675.1;transl_table=11 DAFVNP010000006.1 tpg gene 1770 2759 . + . ID=gene-L8R42_000546;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=L8R42_000546 DAFVNP010000006.1 Protein Homology CDS 1770 2759 . + 0 ID=cds-HBQ7388676.1;Parent=gene-L8R42_000546;Dbxref=NCBI_GP:HBQ7388676.1;Name=HBQ7388676.1;gbkey=CDS;gene=tdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=L8R42_000546;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=HBQ7388676.1;transl_table=11 DAFVNP010000006.1 tpg gene 2780 4111 . + . ID=gene-L8R42_000547;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=L8R42_000547 DAFVNP010000006.1 Protein Homology CDS 2780 4111 . + 0 ID=cds-HBQ7388677.1;Parent=gene-L8R42_000547;Dbxref=NCBI_GP:HBQ7388677.1;Name=HBQ7388677.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=L8R42_000547;product=threonine/serine transporter TdcC;protein_id=HBQ7388677.1;transl_table=11 DAFVNP010000006.1 tpg gene 4178 5386 . + . ID=gene-L8R42_000548;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=L8R42_000548 DAFVNP010000006.1 Protein Homology CDS 4178 5386 . + 0 ID=cds-HBQ7388678.1;Parent=gene-L8R42_000548;Dbxref=NCBI_GP:HBQ7388678.1;Name=HBQ7388678.1;gbkey=CDS;gene=tdcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=L8R42_000548;product=propionate kinase;protein_id=HBQ7388678.1;transl_table=11 DAFVNP010000006.1 tpg gene 5420 7714 . + . ID=gene-L8R42_000549;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=L8R42_000549 DAFVNP010000006.1 Protein Homology CDS 5420 7714 . + 0 ID=cds-HBQ7388679.1;Parent=gene-L8R42_000549;Dbxref=NCBI_GP:HBQ7388679.1;Name=HBQ7388679.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=L8R42_000549;product=formate C-acetyltransferase;protein_id=HBQ7388679.1;transl_table=11 DAFVNP010000006.1 tpg gene 7784 9148 . + . ID=gene-L8R42_000550;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=L8R42_000550 DAFVNP010000006.1 Protein Homology CDS 7784 9148 . + 0 ID=cds-HBQ7388680.1;Parent=gene-L8R42_000550;Dbxref=NCBI_GP:HBQ7388680.1;Name=HBQ7388680.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=L8R42_000550;product=L-serine ammonia-lyase;protein_id=HBQ7388680.1;transl_table=11 DAFVNP010000006.1 tpg gene 9463 10794 . + . ID=gene-L8R42_000551;Name=L8R42_000551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000551 DAFVNP010000006.1 Protein Homology CDS 9463 10794 . + 0 ID=cds-HBQ7388681.1;Parent=gene-L8R42_000551;Dbxref=NCBI_GP:HBQ7388681.1;Name=HBQ7388681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=L8R42_000551;product=HAAAP family serine/threonine permease;protein_id=HBQ7388681.1;transl_table=11 DAFVNP010000006.1 tpg gene 10820 12130 . + . ID=gene-L8R42_000552;Name=L8R42_000552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000552 DAFVNP010000006.1 Protein Homology CDS 10820 12130 . + 0 ID=cds-HBQ7388682.1;Parent=gene-L8R42_000552;Dbxref=NCBI_GP:HBQ7388682.1;Name=HBQ7388682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=L8R42_000552;product=serine dehydratase subunit alpha family protein;protein_id=HBQ7388682.1;transl_table=11 DAFVNP010000006.1 tpg gene 12243 12407 . - . ID=gene-L8R42_000553;Name=L8R42_000553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000553 DAFVNP010000006.1 Protein Homology CDS 12243 12407 . - 0 ID=cds-HBQ7388683.1;Parent=gene-L8R42_000553;Dbxref=NCBI_GP:HBQ7388683.1;Name=HBQ7388683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=L8R42_000553;product=hypothetical protein;protein_id=HBQ7388683.1;transl_table=11 DAFVNP010000006.1 tpg gene 12431 13132 . - . ID=gene-L8R42_000554;Name=L8R42_000554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000554 DAFVNP010000006.1 Protein Homology CDS 12431 13132 . - 0 ID=cds-HBQ7388684.1;Parent=gene-L8R42_000554;Dbxref=NCBI_GP:HBQ7388684.1;Name=HBQ7388684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=L8R42_000554;product=pirin family protein;protein_id=HBQ7388684.1;transl_table=11 DAFVNP010000006.1 tpg gene 13237 14133 . + . ID=gene-L8R42_000555;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=L8R42_000555 DAFVNP010000006.1 Protein Homology CDS 13237 14133 . + 0 ID=cds-HBQ7388685.1;Parent=gene-L8R42_000555;Dbxref=NCBI_GP:HBQ7388685.1;Name=HBQ7388685.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=L8R42_000555;product=DNA-binding transcriptional regulator YhaJ;protein_id=HBQ7388685.1;transl_table=11 DAFVNP010000006.1 tpg gene 14172 14537 . - . ID=gene-L8R42_000556;Name=L8R42_000556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000556 DAFVNP010000006.1 Protein Homology CDS 14172 14537 . - 0 ID=cds-HBQ7388686.1;Parent=gene-L8R42_000556;Dbxref=NCBI_GP:HBQ7388686.1;Name=HBQ7388686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=L8R42_000556;product=DUF805 domain-containing protein;protein_id=HBQ7388686.1;transl_table=11 DAFVNP010000006.1 tpg gene 14661 15647 . - . ID=gene-L8R42_000557;Name=L8R42_000557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000557 DAFVNP010000006.1 Protein Homology CDS 14661 15647 . - 0 ID=cds-HBQ7388687.1;Parent=gene-L8R42_000557;Dbxref=NCBI_GP:HBQ7388687.1;Name=HBQ7388687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=L8R42_000557;product=glutathione S-transferase family protein;protein_id=HBQ7388687.1;transl_table=11 DAFVNP010000006.1 tpg gene 15715 16107 . - . ID=gene-L8R42_000558;Name=L8R42_000558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000558 DAFVNP010000006.1 Protein Homology CDS 15715 16107 . - 0 ID=cds-HBQ7388688.1;Parent=gene-L8R42_000558;Dbxref=NCBI_GP:HBQ7388688.1;Name=HBQ7388688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=L8R42_000558;product=DoxX family protein;protein_id=HBQ7388688.1;transl_table=11 DAFVNP010000006.1 tpg gene 16355 16654 . - . ID=gene-L8R42_000559;Name=L8R42_000559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000559 DAFVNP010000006.1 Protein Homology CDS 16355 16654 . - 0 ID=cds-HBQ7388689.1;Parent=gene-L8R42_000559;Dbxref=NCBI_GP:HBQ7388689.1;Name=HBQ7388689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=L8R42_000559;product=YqjK-like family protein;protein_id=HBQ7388689.1;transl_table=11 DAFVNP010000006.1 tpg gene 16651 17049 . - . ID=gene-L8R42_000560;Name=L8R42_000560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000560 DAFVNP010000006.1 Protein Homology CDS 16651 17049 . - 0 ID=cds-HBQ7388690.1;Parent=gene-L8R42_000560;Dbxref=NCBI_GP:HBQ7388690.1;Name=HBQ7388690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=L8R42_000560;product=phage holin family protein;protein_id=HBQ7388690.1;transl_table=11 DAFVNP010000006.1 tpg gene 17052 17357 . - . ID=gene-L8R42_000561;Name=L8R42_000561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000561 DAFVNP010000006.1 Protein Homology CDS 17052 17357 . - 0 ID=cds-HBQ7388691.1;Parent=gene-L8R42_000561;Dbxref=NCBI_GP:HBQ7388691.1;Name=HBQ7388691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=L8R42_000561;product=DUF883 domain-containing protein;protein_id=HBQ7388691.1;transl_table=11 DAFVNP010000006.1 tpg gene 17399 17767 . - . ID=gene-L8R42_000562;Name=L8R42_000562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000562 DAFVNP010000006.1 Protein Homology CDS 17399 17767 . - 0 ID=cds-HBQ7388692.1;Parent=gene-L8R42_000562;Dbxref=NCBI_GP:HBQ7388692.1;Name=HBQ7388692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=L8R42_000562;product=DUF1090 domain-containing protein;protein_id=HBQ7388692.1;transl_table=11 DAFVNP010000006.1 tpg gene 17912 18295 . - . ID=gene-L8R42_000563;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=L8R42_000563 DAFVNP010000006.1 Protein Homology CDS 17912 18295 . - 0 ID=cds-HBQ7388693.1;Parent=gene-L8R42_000563;Dbxref=NCBI_GP:HBQ7388693.1;Name=HBQ7388693.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=L8R42_000563;product=EnvZ/OmpR regulon moderator MzrA;protein_id=HBQ7388693.1;transl_table=11 DAFVNP010000006.1 tpg gene 18299 18961 . - . ID=gene-L8R42_000564;Name=L8R42_000564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000564 DAFVNP010000006.1 Protein Homology CDS 18299 18961 . - 0 ID=cds-HBQ7388694.1;Parent=gene-L8R42_000564;Dbxref=NCBI_GP:HBQ7388694.1;Name=HBQ7388694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=L8R42_000564;product=DedA family protein;protein_id=HBQ7388694.1;transl_table=11 DAFVNP010000006.1 tpg gene 19411 20655 . - . ID=gene-L8R42_000565;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=L8R42_000565 DAFVNP010000006.1 Protein Homology CDS 19411 20655 . - 0 ID=cds-HBQ7388695.1;Parent=gene-L8R42_000565;Dbxref=NCBI_GP:HBQ7388695.1;Name=HBQ7388695.1;gbkey=CDS;gene=sstT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=L8R42_000565;product=serine/threonine transporter SstT;protein_id=HBQ7388695.1;transl_table=11 DAFVNP010000006.1 tpg gene 20910 21878 . - . ID=gene-L8R42_000566;Name=L8R42_000566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000566 DAFVNP010000006.1 Protein Homology CDS 20910 21878 . - 0 ID=cds-HBQ7388696.1;Parent=gene-L8R42_000566;Dbxref=NCBI_GP:HBQ7388696.1;Name=HBQ7388696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=L8R42_000566;product=TerC family protein;protein_id=HBQ7388696.1;transl_table=11 DAFVNP010000006.1 tpg gene 22148 23146 . - . ID=gene-L8R42_000567;Name=L8R42_000567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000567 DAFVNP010000006.1 Protein Homology CDS 22148 23146 . - 0 ID=cds-HBQ7388697.1;Parent=gene-L8R42_000567;Dbxref=NCBI_GP:HBQ7388697.1;Name=HBQ7388697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=L8R42_000567;product=Gfo/Idh/MocA family oxidoreductase;protein_id=HBQ7388697.1;transl_table=11 DAFVNP010000006.1 tpg gene 23234 23926 . - . ID=gene-L8R42_000568;Name=L8R42_000568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000568 DAFVNP010000006.1 Protein Homology CDS 23234 23926 . - 0 ID=cds-HBQ7388698.1;Parent=gene-L8R42_000568;Dbxref=NCBI_GP:HBQ7388698.1;Name=HBQ7388698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=L8R42_000568;product=vancomycin high temperature exclusion protein;protein_id=HBQ7388698.1;transl_table=11 DAFVNP010000006.1 tpg gene 24078 24575 . - . ID=gene-L8R42_000569;Name=L8R42_000569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000569 DAFVNP010000006.1 Protein Homology CDS 24078 24575 . - 0 ID=cds-HBQ7388699.1;Parent=gene-L8R42_000569;Dbxref=NCBI_GP:HBQ7388699.1;Name=HBQ7388699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=L8R42_000569;product=M48 family metallopeptidase;protein_id=HBQ7388699.1;transl_table=11 DAFVNP010000006.1 tpg gene 24661 25797 . + . ID=gene-L8R42_000570;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=L8R42_000570 DAFVNP010000006.1 Protein Homology CDS 24661 25797 . + 0 ID=cds-HBQ7388700.1;Parent=gene-L8R42_000570;Dbxref=NCBI_GP:HBQ7388700.1;Name=HBQ7388700.1;gbkey=CDS;gene=rlmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=L8R42_000570;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=HBQ7388700.1;transl_table=11 DAFVNP010000006.1 tpg gene 25878 27896 . - . ID=gene-L8R42_000571;Name=L8R42_000571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000571 DAFVNP010000006.1 Protein Homology CDS 25878 27896 . - 0 ID=cds-HBQ7388701.1;Parent=gene-L8R42_000571;Dbxref=NCBI_GP:HBQ7388701.1;Name=HBQ7388701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=L8R42_000571;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=HBQ7388701.1;transl_table=11 DAFVNP010000006.1 tpg gene 28067 29446 . - . ID=gene-L8R42_000572;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=L8R42_000572 DAFVNP010000006.1 Protein Homology CDS 28067 29446 . - 0 ID=cds-HBQ7388702.1;Parent=gene-L8R42_000572;Dbxref=NCBI_GP:HBQ7388702.1;Name=HBQ7388702.1;gbkey=CDS;gene=ygjG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=L8R42_000572;product=putrescine aminotransferase;protein_id=HBQ7388702.1;transl_table=11 DAFVNP010000006.1 tpg gene 29876 31396 . + . ID=gene-L8R42_000573;Name=L8R42_000573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000573 DAFVNP010000006.1 Protein Homology CDS 29876 31396 . + 0 ID=cds-HBQ7388703.1;Parent=gene-L8R42_000573;Dbxref=NCBI_GP:HBQ7388703.1;Name=HBQ7388703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=L8R42_000573;product=PAS domain-containing protein;protein_id=HBQ7388703.1;transl_table=11 DAFVNP010000006.1 tpg gene 31783 33351 . + . ID=gene-L8R42_000574;Name=L8R42_000574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000574 DAFVNP010000006.1 Protein Homology CDS 31783 33351 . + 0 ID=cds-HBQ7388704.1;Parent=gene-L8R42_000574;Dbxref=NCBI_GP:HBQ7388704.1;Name=HBQ7388704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=L8R42_000574;product=MCP four helix bundle domain-containing protein;protein_id=HBQ7388704.1;transl_table=11 DAFVNP010000006.1 tpg gene 33348 33995 . - . ID=gene-L8R42_000575;Name=L8R42_000575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000575 DAFVNP010000006.1 Protein Homology CDS 33348 33995 . - 0 ID=cds-HBQ7388705.1;Parent=gene-L8R42_000575;Dbxref=NCBI_GP:HBQ7388705.1;Name=HBQ7388705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=L8R42_000575;product=PadR family transcriptional regulator;protein_id=HBQ7388705.1;transl_table=11 DAFVNP010000006.1 tpg gene 34227 34994 . + . ID=gene-L8R42_000576;Name=L8R42_000576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000576 DAFVNP010000006.1 Protein Homology CDS 34227 34994 . + 0 ID=cds-HBQ7388706.1;Parent=gene-L8R42_000576;Dbxref=NCBI_GP:HBQ7388706.1;Name=HBQ7388706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=L8R42_000576;product=siderophore-interacting protein;protein_id=HBQ7388706.1;transl_table=11 DAFVNP010000006.1 tpg gene 35234 36022 . - . ID=gene-L8R42_000577;Name=L8R42_000577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000577 DAFVNP010000006.1 GeneMarkS-2+ CDS 35234 36022 . - 0 ID=cds-HBQ7388707.1;Parent=gene-L8R42_000577;Dbxref=NCBI_GP:HBQ7388707.1;Name=HBQ7388707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_000577;product=hypothetical protein;protein_id=HBQ7388707.1;transl_table=11 DAFVNP010000006.1 tpg gene 36019 37041 . - . ID=gene-L8R42_000578;Name=L8R42_000578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000578 DAFVNP010000006.1 Protein Homology CDS 36019 37041 . - 0 ID=cds-HBQ7388708.1;Parent=gene-L8R42_000578;Dbxref=NCBI_GP:HBQ7388708.1;Name=HBQ7388708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455353.1;locus_tag=L8R42_000578;product=tyrosine-type recombinase/integrase;protein_id=HBQ7388708.1;transl_table=11 DAFVNP010000006.1 tpg gene 37045 37611 . - . ID=gene-L8R42_000579;Name=L8R42_000579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000579 DAFVNP010000006.1 Protein Homology CDS 37045 37611 . - 0 ID=cds-HBQ7388709.1;Parent=gene-L8R42_000579;Dbxref=NCBI_GP:HBQ7388709.1;Name=HBQ7388709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885296.1;locus_tag=L8R42_000579;product=PH domain-containing protein;protein_id=HBQ7388709.1;transl_table=11 DAFVNP010000006.1 tpg gene 37628 38209 . - . ID=gene-L8R42_000580;Name=L8R42_000580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000580 DAFVNP010000006.1 Protein Homology CDS 37628 38209 . - 0 ID=cds-HBQ7388710.1;Parent=gene-L8R42_000580;Dbxref=NCBI_GP:HBQ7388710.1;Name=HBQ7388710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514631.1;locus_tag=L8R42_000580;product=phage repressor protein CI;protein_id=HBQ7388710.1;transl_table=11 DAFVNP010000006.1 tpg gene 38353 38574 . + . ID=gene-L8R42_000581;Name=L8R42_000581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000581 DAFVNP010000006.1 Protein Homology CDS 38353 38574 . + 0 ID=cds-HBQ7388711.1;Parent=gene-L8R42_000581;Dbxref=NCBI_GP:HBQ7388711.1;Name=HBQ7388711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836041.1;locus_tag=L8R42_000581;product=regulator;protein_id=HBQ7388711.1;transl_table=11 DAFVNP010000006.1 tpg gene 38605 39108 . + . ID=gene-L8R42_000582;Name=L8R42_000582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000582 DAFVNP010000006.1 Protein Homology CDS 38605 39108 . + 0 ID=cds-HBQ7388712.1;Parent=gene-L8R42_000582;Dbxref=NCBI_GP:HBQ7388712.1;Name=HBQ7388712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460876.1;locus_tag=L8R42_000582;product=phage regulatory CII family protein;protein_id=HBQ7388712.1;transl_table=11 DAFVNP010000006.1 tpg gene 39118 39345 . + . ID=gene-L8R42_000583;Name=L8R42_000583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000583 DAFVNP010000006.1 Protein Homology CDS 39118 39345 . + 0 ID=cds-HBQ7388713.1;Parent=gene-L8R42_000583;Dbxref=NCBI_GP:HBQ7388713.1;Name=HBQ7388713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000643374.1;locus_tag=L8R42_000583;product=DUF2724 domain-containing protein;protein_id=HBQ7388713.1;transl_table=11 DAFVNP010000006.1 tpg gene 39335 39760 . + . ID=gene-L8R42_000584;Name=L8R42_000584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000584 DAFVNP010000006.1 Protein Homology CDS 39335 39760 . + 0 ID=cds-HBQ7388714.1;Parent=gene-L8R42_000584;Dbxref=NCBI_GP:HBQ7388714.1;Name=HBQ7388714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996837.1;locus_tag=L8R42_000584;product=hypothetical protein;protein_id=HBQ7388714.1;transl_table=11 DAFVNP010000006.1 tpg gene 39760 40161 . + . ID=gene-L8R42_000585;Name=L8R42_000585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000585 DAFVNP010000006.1 Protein Homology CDS 39760 40161 . + 0 ID=cds-HBQ7388715.1;Parent=gene-L8R42_000585;Dbxref=NCBI_GP:HBQ7388715.1;Name=HBQ7388715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738709.1;locus_tag=L8R42_000585;product=hypothetical protein;protein_id=HBQ7388715.1;transl_table=11 DAFVNP010000006.1 tpg gene 40229 40459 . + . ID=gene-L8R42_000586;Name=L8R42_000586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000586 DAFVNP010000006.1 Protein Homology CDS 40229 40459 . + 0 ID=cds-HBQ7388716.1;Parent=gene-L8R42_000586;Dbxref=NCBI_GP:HBQ7388716.1;Name=HBQ7388716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057337.1;locus_tag=L8R42_000586;product=DUF2732 family protein;protein_id=HBQ7388716.1;transl_table=11 DAFVNP010000006.1 tpg gene 40450 41310 . + . ID=gene-L8R42_000587;Name=L8R42_000587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000587 DAFVNP010000006.1 Protein Homology CDS 40450 41310 . + 0 ID=cds-HBQ7388717.1;Parent=gene-L8R42_000587;Dbxref=NCBI_GP:HBQ7388717.1;Name=HBQ7388717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279404.1;locus_tag=L8R42_000587;product=DNA adenine methylase;protein_id=HBQ7388717.1;transl_table=11 DAFVNP010000006.1 tpg gene 41307 43334 . + . ID=gene-L8R42_000588;Name=L8R42_000588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000588 DAFVNP010000006.1 Protein Homology CDS 41307 43334 . + 0 ID=cds-HBQ7388718.1;Parent=gene-L8R42_000588;Dbxref=NCBI_GP:HBQ7388718.1;Name=HBQ7388718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170880.1;locus_tag=L8R42_000588;product=replication endonuclease;protein_id=HBQ7388718.1;transl_table=11 DAFVNP010000006.1 tpg gene 43454 43660 . + . ID=gene-L8R42_000589;Name=L8R42_000589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000589 DAFVNP010000006.1 Protein Homology CDS 43454 43660 . + 0 ID=cds-HBQ7388719.1;Parent=gene-L8R42_000589;Dbxref=NCBI_GP:HBQ7388719.1;Name=HBQ7388719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353144.1;locus_tag=L8R42_000589;product=hypothetical protein;protein_id=HBQ7388719.1;transl_table=11 DAFVNP010000006.1 tpg gene 43634 43957 . - . ID=gene-L8R42_000590;Name=L8R42_000590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000590 DAFVNP010000006.1 Protein Homology CDS 43634 43957 . - 0 ID=cds-HBQ7388720.1;Parent=gene-L8R42_000590;Dbxref=NCBI_GP:HBQ7388720.1;Name=HBQ7388720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552031.1;locus_tag=L8R42_000590;product=ogr/Delta-like zinc finger family protein;protein_id=HBQ7388720.1;transl_table=11 DAFVNP010000006.1 tpg gene 43954 45015 . - . ID=gene-L8R42_000591;Name=L8R42_000591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000591 DAFVNP010000006.1 Protein Homology CDS 43954 45015 . - 0 ID=cds-HBQ7388721.1;Parent=gene-L8R42_000591;Dbxref=NCBI_GP:HBQ7388721.1;Name=HBQ7388721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038213.1;locus_tag=L8R42_000591;product=phage portal protein;protein_id=HBQ7388721.1;transl_table=11 DAFVNP010000006.1 tpg gene 45012 46787 . - . ID=gene-L8R42_000592;Name=L8R42_000592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000592 DAFVNP010000006.1 Protein Homology CDS 45012 46787 . - 0 ID=cds-HBQ7388722.1;Parent=gene-L8R42_000592;Dbxref=NCBI_GP:HBQ7388722.1;Name=HBQ7388722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151939.1;locus_tag=L8R42_000592;product=terminase family protein;protein_id=HBQ7388722.1;transl_table=11 DAFVNP010000006.1 tpg gene 46948 47751 . + . ID=gene-L8R42_000593;Name=L8R42_000593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000593 DAFVNP010000006.1 Protein Homology CDS 46948 47751 . + 0 ID=cds-HBQ7388723.1;Parent=gene-L8R42_000593;Dbxref=NCBI_GP:HBQ7388723.1;Name=HBQ7388723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018795.1;locus_tag=L8R42_000593;product=GPO family capsid scaffolding protein;protein_id=HBQ7388723.1;transl_table=11 DAFVNP010000006.1 tpg gene 47813 48835 . + . ID=gene-L8R42_000594;Name=L8R42_000594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000594 DAFVNP010000006.1 Protein Homology CDS 47813 48835 . + 0 ID=cds-HBQ7388724.1;Parent=gene-L8R42_000594;Dbxref=NCBI_GP:HBQ7388724.1;Name=HBQ7388724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550496.1;locus_tag=L8R42_000594;product=phage major capsid protein%2C P2 family;protein_id=HBQ7388724.1;transl_table=11 DAFVNP010000006.1 tpg gene 48839 49540 . + . ID=gene-L8R42_000595;Name=L8R42_000595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000595 DAFVNP010000006.1 Protein Homology CDS 48839 49540 . + 0 ID=cds-HBQ7388725.1;Parent=gene-L8R42_000595;Dbxref=NCBI_GP:HBQ7388725.1;Name=HBQ7388725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218529.1;locus_tag=L8R42_000595;product=terminase;protein_id=HBQ7388725.1;transl_table=11 DAFVNP010000006.1 tpg gene 49637 50089 . + . ID=gene-L8R42_000596;Name=L8R42_000596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000596 DAFVNP010000006.1 Protein Homology CDS 49637 50089 . + 0 ID=cds-HBQ7388726.1;Parent=gene-L8R42_000596;Dbxref=NCBI_GP:HBQ7388726.1;Name=HBQ7388726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738723.1;locus_tag=L8R42_000596;product=head completion/stabilization protein;protein_id=HBQ7388726.1;transl_table=11 DAFVNP010000006.1 tpg gene 50086 50592 . + . ID=gene-L8R42_000597;Name=L8R42_000597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000597 DAFVNP010000006.1 Protein Homology CDS 50086 50592 . + 0 ID=cds-HBQ7388727.1;Parent=gene-L8R42_000597;Dbxref=NCBI_GP:HBQ7388727.1;Name=HBQ7388727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084219.1;locus_tag=L8R42_000597;product=phage tail protein;protein_id=HBQ7388727.1;transl_table=11 DAFVNP010000006.1 tpg gene 50589 51296 . + . ID=gene-L8R42_000598;Name=L8R42_000598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000598 DAFVNP010000006.1 Protein Homology CDS 50589 51296 . + 0 ID=cds-HBQ7388728.1;Parent=gene-L8R42_000598;Dbxref=NCBI_GP:HBQ7388728.1;Name=HBQ7388728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560077.1;locus_tag=L8R42_000598;product=hypothetical protein;protein_id=HBQ7388728.1;transl_table=11 DAFVNP010000006.1 tpg gene 51293 52420 . + . ID=gene-L8R42_000599;Name=L8R42_000599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000599 DAFVNP010000006.1 Protein Homology CDS 51293 52420 . + 0 ID=cds-HBQ7388729.1;Parent=gene-L8R42_000599;Dbxref=NCBI_GP:HBQ7388729.1;Name=HBQ7388729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748631.1;locus_tag=L8R42_000599;product=DUF2586 family protein;protein_id=HBQ7388729.1;transl_table=11 DAFVNP010000006.1 tpg gene 52417 52872 . + . ID=gene-L8R42_000600;Name=L8R42_000600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000600 DAFVNP010000006.1 Protein Homology CDS 52417 52872 . + 0 ID=cds-HBQ7388730.1;Parent=gene-L8R42_000600;Dbxref=NCBI_GP:HBQ7388730.1;Name=HBQ7388730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044254.1;locus_tag=L8R42_000600;product=DUF2597 family protein;protein_id=HBQ7388730.1;transl_table=11 DAFVNP010000006.1 tpg gene 52882 53175 . + . ID=gene-L8R42_000601;Name=L8R42_000601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000601 DAFVNP010000006.1 Protein Homology CDS 52882 53175 . + 0 ID=cds-HBQ7388731.1;Parent=gene-L8R42_000601;Dbxref=NCBI_GP:HBQ7388731.1;Name=HBQ7388731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001154425.1;locus_tag=L8R42_000601;product=phage holin family protein;protein_id=HBQ7388731.1;transl_table=11 DAFVNP010000006.1 tpg gene 53172 53513 . + . ID=gene-L8R42_000602;Name=L8R42_000602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000602 DAFVNP010000006.1 Protein Homology CDS 53172 53513 . + 0 ID=cds-HBQ7388732.1;Parent=gene-L8R42_000602;Dbxref=NCBI_GP:HBQ7388732.1;Name=HBQ7388732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=L8R42_000602;product=M15 family metallopeptidase;protein_id=HBQ7388732.1;transl_table=11 DAFVNP010000006.1 tpg gene 53513 53845 . + . ID=gene-L8R42_000603;Name=L8R42_000603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000603 DAFVNP010000006.1 Protein Homology CDS 53513 53845 . + 0 ID=cds-HBQ7388733.1;Parent=gene-L8R42_000603;Dbxref=NCBI_GP:HBQ7388733.1;Name=HBQ7388733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376378.1;locus_tag=L8R42_000603;product=hypothetical protein;protein_id=HBQ7388733.1;transl_table=11 DAFVNP010000006.1 tpg gene 53992 54249 . + . ID=gene-L8R42_000604;Name=L8R42_000604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000604 DAFVNP010000006.1 Protein Homology CDS 53992 54249 . + 0 ID=cds-HBQ7388734.1;Parent=gene-L8R42_000604;Dbxref=NCBI_GP:HBQ7388734.1;Name=HBQ7388734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435058.1;locus_tag=L8R42_000604;product=putative phage tail assembly chaperone;protein_id=HBQ7388734.1;transl_table=11 DAFVNP010000006.1 tpg gene 54437 56404 . + . ID=gene-L8R42_000605;Name=L8R42_000605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000605 DAFVNP010000006.1 Protein Homology CDS 54437 56404 . + 0 ID=cds-HBQ7388735.1;Parent=gene-L8R42_000605;Dbxref=NCBI_GP:HBQ7388735.1;Name=HBQ7388735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000811087.1;locus_tag=L8R42_000605;product=phage tail tape measure protein;protein_id=HBQ7388735.1;transl_table=11 DAFVNP010000006.1 tpg gene 56401 56730 . + . ID=gene-L8R42_000606;Name=L8R42_000606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000606 DAFVNP010000006.1 Protein Homology CDS 56401 56730 . + 0 ID=cds-HBQ7388736.1;Parent=gene-L8R42_000606;Dbxref=NCBI_GP:HBQ7388736.1;Name=HBQ7388736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289823.1;locus_tag=L8R42_000606;product=DUF2590 family protein;protein_id=HBQ7388736.1;transl_table=11 DAFVNP010000006.1 tpg gene 56727 57911 . + . ID=gene-L8R42_000607;Name=L8R42_000607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000607 DAFVNP010000006.1 Protein Homology CDS 56727 57911 . + 0 ID=cds-HBQ7388737.1;Parent=gene-L8R42_000607;Dbxref=NCBI_GP:HBQ7388737.1;Name=HBQ7388737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507090.1;locus_tag=L8R42_000607;product=baseplate J/gp47 family protein;protein_id=HBQ7388737.1;transl_table=11 DAFVNP010000006.1 tpg gene 57904 58491 . + . ID=gene-L8R42_000608;Name=L8R42_000608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000608 DAFVNP010000006.1 Protein Homology CDS 57904 58491 . + 0 ID=cds-HBQ7388738.1;Parent=gene-L8R42_000608;Dbxref=NCBI_GP:HBQ7388738.1;Name=HBQ7388738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006772868.1;locus_tag=L8R42_000608;product=hypothetical protein;protein_id=HBQ7388738.1;transl_table=11 DAFVNP010000006.1 tpg gene 58500 60740 . + . ID=gene-L8R42_000609;Name=L8R42_000609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000609 DAFVNP010000006.1 Protein Homology CDS 58500 60740 . + 0 ID=cds-HBQ7388739.1;Parent=gene-L8R42_000609;Dbxref=NCBI_GP:HBQ7388739.1;Name=HBQ7388739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534882.1;locus_tag=L8R42_000609;product=phage tail protein;protein_id=HBQ7388739.1;transl_table=11 DAFVNP010000006.1 tpg gene 60710 61315 . + . ID=gene-L8R42_000610;Name=L8R42_000610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000610 DAFVNP010000006.1 Protein Homology CDS 60710 61315 . + 0 ID=cds-HBQ7388740.1;Parent=gene-L8R42_000610;Dbxref=NCBI_GP:HBQ7388740.1;Name=HBQ7388740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701331.1;locus_tag=L8R42_000610;product=tail fiber assembly protein;protein_id=HBQ7388740.1;transl_table=11 DAFVNP010000006.1 tpg gene 61305 62030 . + . ID=gene-L8R42_000611;Name=L8R42_000611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000611 DAFVNP010000006.1 Protein Homology CDS 61305 62030 . + 0 ID=cds-HBQ7388741.1;Parent=gene-L8R42_000611;Dbxref=NCBI_GP:HBQ7388741.1;Name=HBQ7388741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000267957.1;locus_tag=L8R42_000611;product=hypothetical protein;protein_id=HBQ7388741.1;transl_table=11 DAFVNP010000006.1 tpg gene 62002 62547 . + . ID=gene-L8R42_000612;Name=L8R42_000612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000612 DAFVNP010000006.1 Protein Homology CDS 62002 62547 . + 0 ID=cds-HBQ7388742.1;Parent=gene-L8R42_000612;Dbxref=NCBI_GP:HBQ7388742.1;Name=HBQ7388742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200792.1;locus_tag=L8R42_000612;product=hypothetical protein;protein_id=HBQ7388742.1;transl_table=11 DAFVNP010000006.1 tpg gene 62547 64250 . + . ID=gene-L8R42_000613;Name=L8R42_000613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000613 DAFVNP010000006.1 Protein Homology CDS 62547 64250 . + 0 ID=cds-HBQ7388743.1;Parent=gene-L8R42_000613;Dbxref=NCBI_GP:HBQ7388743.1;Name=HBQ7388743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534868.1;locus_tag=L8R42_000613;product=hypothetical protein;protein_id=HBQ7388743.1;transl_table=11 DAFVNP010000006.1 tpg gene 65619 65921 . + . ID=gene-L8R42_000614;Name=L8R42_000614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000614 DAFVNP010000006.1 Protein Homology CDS 65619 65921 . + 0 ID=cds-HBQ7388744.1;Parent=gene-L8R42_000614;Dbxref=NCBI_GP:HBQ7388744.1;Name=HBQ7388744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000340945.1;locus_tag=L8R42_000614;product=reverse transcriptase;protein_id=HBQ7388744.1;transl_table=11 DAFVNP010000006.1 tpg gene 66044 66119 . - . ID=gene-L8R42_000615;Name=L8R42_000615;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000615 DAFVNP010000006.1 tRNAscan-SE tRNA 66044 66119 . - . ID=rna-L8R42_000615;Parent=gene-L8R42_000615;anticodon=(pos:complement(66084..66086));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000615;product=tRNA-Ile DAFVNP010000006.1 tRNAscan-SE exon 66044 66119 . - . ID=exon-L8R42_000615-1;Parent=rna-L8R42_000615;anticodon=(pos:complement(66084..66086));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000615;product=tRNA-Ile DAFVNP010000006.1 tpg gene 66245 66751 . + . ID=gene-L8R42_000616;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=L8R42_000616 DAFVNP010000006.1 Protein Homology CDS 66245 66751 . + 0 ID=cds-HBQ7388745.1;Parent=gene-L8R42_000616;Dbxref=NCBI_GP:HBQ7388745.1;Name=HBQ7388745.1;gbkey=CDS;gene=mug;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=L8R42_000616;product=G/U mismatch-specific DNA glycosylase;protein_id=HBQ7388745.1;transl_table=11 DAFVNP010000006.1 tpg gene 66875 68722 . - . ID=gene-L8R42_000617;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=L8R42_000617 DAFVNP010000006.1 Protein Homology CDS 66875 68722 . - 0 ID=cds-HBQ7388746.1;Parent=gene-L8R42_000617;Dbxref=NCBI_GP:HBQ7388746.1;Name=HBQ7388746.1;gbkey=CDS;gene=rpoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=L8R42_000617;product=RNA polymerase sigma factor RpoD;protein_id=HBQ7388746.1;transl_table=11 DAFVNP010000006.1 tpg gene 68872 70614 . - . ID=gene-L8R42_000618;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=L8R42_000618 DAFVNP010000006.1 Protein Homology CDS 68872 70614 . - 0 ID=cds-HBQ7388747.1;Parent=gene-L8R42_000618;Dbxref=NCBI_GP:HBQ7388747.1;Name=HBQ7388747.1;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=L8R42_000618;product=DNA primase;protein_id=HBQ7388747.1;transl_table=11 DAFVNP010000006.1 tpg gene 70850 71065 . - . ID=gene-L8R42_000619;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=L8R42_000619 DAFVNP010000006.1 Protein Homology CDS 70850 71065 . - 0 ID=cds-HBQ7388748.1;Parent=gene-L8R42_000619;Dbxref=NCBI_GP:HBQ7388748.1;Name=HBQ7388748.1;gbkey=CDS;gene=rpsU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=L8R42_000619;product=30S ribosomal protein S21;protein_id=HBQ7388748.1;transl_table=11 DAFVNP010000006.1 tpg gene 71293 72306 . + . ID=gene-L8R42_000620;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=L8R42_000620 DAFVNP010000006.1 Protein Homology CDS 71293 72306 . + 0 ID=cds-HBQ7388749.1;Parent=gene-L8R42_000620;Dbxref=NCBI_GP:HBQ7388749.1;Name=HBQ7388749.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=L8R42_000620;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=HBQ7388749.1;transl_table=11 DAFVNP010000006.1 tpg pseudogene 72347 72427 . - . ID=gene-L8R42_000621;Name=L8R42_000621;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_000621;pseudo=true DAFVNP010000006.1 Protein Homology CDS 72347 72427 . - 0 ID=cds-L8R42_000621;Parent=gene-L8R42_000621;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311973.1;locus_tag=L8R42_000621;product=sodium:sulfate symporter;pseudo=true;transl_table=11 DAFVNP010000006.1 tpg gene 72530 73147 . - . ID=gene-L8R42_000622;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=L8R42_000622 DAFVNP010000006.1 Protein Homology CDS 72530 73147 . - 0 ID=cds-HBQ7388750.1;Parent=gene-L8R42_000622;Dbxref=NCBI_GP:HBQ7388750.1;Name=HBQ7388750.1;gbkey=CDS;gene=plsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272785.1;locus_tag=L8R42_000622;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=HBQ7388750.1;transl_table=11 DAFVNP010000006.1 tpg gene 73254 73613 . + . ID=gene-L8R42_000623;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=L8R42_000623 DAFVNP010000006.1 Protein Homology CDS 73254 73613 . + 0 ID=cds-HBQ7388751.1;Parent=gene-L8R42_000623;Dbxref=NCBI_GP:HBQ7388751.1;Name=HBQ7388751.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=L8R42_000623;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=HBQ7388751.1;transl_table=11 DAFVNP010000006.1 tpg gene 73711 74532 . + . ID=gene-L8R42_000624;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=L8R42_000624 DAFVNP010000006.1 Protein Homology CDS 73711 74532 . + 0 ID=cds-HBQ7388752.1;Parent=gene-L8R42_000624;Dbxref=NCBI_GP:HBQ7388752.1;Name=HBQ7388752.1;gbkey=CDS;gene=bacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=L8R42_000624;product=undecaprenyl-diphosphate phosphatase;protein_id=HBQ7388752.1;transl_table=11 DAFVNP010000006.1 tpg gene 74637 75878 . - . ID=gene-L8R42_000625;Name=L8R42_000625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000625 DAFVNP010000006.1 Protein Homology CDS 74637 75878 . - 0 ID=cds-HBQ7388753.1;Parent=gene-L8R42_000625;Dbxref=NCBI_GP:HBQ7388753.1;Name=HBQ7388753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=L8R42_000625;product=multifunctional CCA addition/repair protein;protein_id=HBQ7388753.1;transl_table=11 DAFVNP010000006.1 tpg gene 75941 76555 . - . ID=gene-L8R42_000626;Name=L8R42_000626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000626 DAFVNP010000006.1 Protein Homology CDS 75941 76555 . - 0 ID=cds-HBQ7388754.1;Parent=gene-L8R42_000626;Dbxref=NCBI_GP:HBQ7388754.1;Name=HBQ7388754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=L8R42_000626;product=SH3 domain-containing protein;protein_id=HBQ7388754.1;transl_table=11 DAFVNP010000006.1 tpg gene 76797 78098 . + . ID=gene-L8R42_000627;Name=L8R42_000627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000627 DAFVNP010000006.1 Protein Homology CDS 76797 78098 . + 0 ID=cds-HBQ7388755.1;Parent=gene-L8R42_000627;Dbxref=NCBI_GP:HBQ7388755.1;Name=HBQ7388755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=L8R42_000627;product=inorganic triphosphatase;protein_id=HBQ7388755.1;transl_table=11 DAFVNP010000006.1 tpg gene 78216 81059 . + . ID=gene-L8R42_000628;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=L8R42_000628 DAFVNP010000006.1 Protein Homology CDS 78216 81059 . + 0 ID=cds-HBQ7388756.1;Parent=gene-L8R42_000628;Dbxref=NCBI_GP:HBQ7388756.1;Name=HBQ7388756.1;gbkey=CDS;gene=glnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=L8R42_000628;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=HBQ7388756.1;transl_table=11 DAFVNP010000006.1 tpg gene 81107 82540 . + . ID=gene-L8R42_000629;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=L8R42_000629 DAFVNP010000006.1 Protein Homology CDS 81107 82540 . + 0 ID=cds-HBQ7388757.1;Parent=gene-L8R42_000629;Dbxref=NCBI_GP:HBQ7388757.1;Name=HBQ7388757.1;gbkey=CDS;gene=hldE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=L8R42_000629;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=HBQ7388757.1;transl_table=11 DAFVNP010000006.1 tpg gene 82700 82759 . - . ID=gene-L8R42_000630;Name=L8R42_000630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000630 DAFVNP010000006.1 Protein Homology CDS 82700 82759 . - 0 ID=cds-HBQ7388758.1;Parent=gene-L8R42_000630;Dbxref=NCBI_GP:HBQ7388758.1;Name=HBQ7388758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=L8R42_000630;product=type I toxin-antitoxin system Ibs family toxin;protein_id=HBQ7388758.1;transl_table=11 DAFVNP010000006.1 tpg gene 82999 84678 . - . ID=gene-L8R42_000631;Name=L8R42_000631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000631 DAFVNP010000006.1 Protein Homology CDS 82999 84678 . - 0 ID=cds-HBQ7388759.1;Parent=gene-L8R42_000631;Dbxref=NCBI_GP:HBQ7388759.1;Name=HBQ7388759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=L8R42_000631;product=flotillin family protein;protein_id=HBQ7388759.1;transl_table=11 DAFVNP010000006.1 tpg gene 84697 85317 . - . ID=gene-L8R42_000632;Name=L8R42_000632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000632 DAFVNP010000006.1 Protein Homology CDS 84697 85317 . - 0 ID=cds-HBQ7388760.1;Parent=gene-L8R42_000632;Dbxref=NCBI_GP:HBQ7388760.1;Name=HBQ7388760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=L8R42_000632;product=DUF1449 family protein;protein_id=HBQ7388760.1;transl_table=11 DAFVNP010000006.1 tpg gene 85575 85784 . + . ID=gene-L8R42_000633;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=L8R42_000633 DAFVNP010000006.1 Protein Homology CDS 85575 85784 . + 0 ID=cds-HBQ7388761.1;Parent=gene-L8R42_000633;Dbxref=NCBI_GP:HBQ7388761.1;Name=HBQ7388761.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=L8R42_000633;product=cell surface composition regulator GlgS;protein_id=HBQ7388761.1;transl_table=11 DAFVNP010000006.1 tpg gene 85859 86155 . - . ID=gene-L8R42_000634;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;locus_tag=L8R42_000634 DAFVNP010000006.1 Protein Homology CDS 85859 86155 . - 0 ID=cds-HBQ7388762.1;Parent=gene-L8R42_000634;Dbxref=NCBI_GP:HBQ7388762.1;Name=HBQ7388762.1;gbkey=CDS;gene=ubiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=L8R42_000634;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=HBQ7388762.1;transl_table=11 DAFVNP010000006.1 cmsearch riboswitch 86288 86486 . + . ID=id-DAFVNP010000006.1:86288..86486;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch DAFVNP010000006.1 tpg gene 86592 87245 . + . ID=gene-L8R42_000635;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=L8R42_000635 DAFVNP010000006.1 Protein Homology CDS 86592 87245 . + 0 ID=cds-HBQ7388763.1;Parent=gene-L8R42_000635;Dbxref=NCBI_GP:HBQ7388763.1;Name=HBQ7388763.1;gbkey=CDS;gene=ribB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=L8R42_000635;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=HBQ7388763.1;transl_table=11 DAFVNP010000006.1 tpg gene 87416 88093 . - . ID=gene-L8R42_000636;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=L8R42_000636 DAFVNP010000006.1 Protein Homology CDS 87416 88093 . - 0 ID=cds-HBQ7388764.1;Parent=gene-L8R42_000636;Dbxref=NCBI_GP:HBQ7388764.1;Name=HBQ7388764.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=L8R42_000636;product=protein-disulfide oxidoreductase DsbI;protein_id=HBQ7388764.1;transl_table=11 DAFVNP010000006.1 tpg gene 88108 88779 . - . ID=gene-L8R42_000637;Name=L8R42_000637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000637 DAFVNP010000006.1 Protein Homology CDS 88108 88779 . - 0 ID=cds-HBQ7388765.1;Parent=gene-L8R42_000637;Dbxref=NCBI_GP:HBQ7388765.1;Name=HBQ7388765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=L8R42_000637;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=HBQ7388765.1;transl_table=11 DAFVNP010000006.1 tpg gene 88799 90595 . - . ID=gene-L8R42_000638;Name=L8R42_000638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000638 DAFVNP010000006.1 Protein Homology CDS 88799 90595 . - 0 ID=cds-HBQ7388766.1;Parent=gene-L8R42_000638;Dbxref=NCBI_GP:HBQ7388766.1;Name=HBQ7388766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=L8R42_000638;product=aryl-sulfate sulfotransferase;protein_id=HBQ7388766.1;transl_table=11 ##sequence-region DAFVNP010000007.1 1 89776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000007.1 tpg region 1 89776 . + . ID=DAFVNP010000007.1:1..89776;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000007.1 tpg gene 40 115 . - . ID=gene-L8R42_000639;Name=L8R42_000639;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000639 DAFVNP010000007.1 tRNAscan-SE tRNA 40 115 . - . ID=rna-L8R42_000639;Parent=gene-L8R42_000639;anticodon=(pos:complement(80..82));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000639;product=tRNA-Val DAFVNP010000007.1 tRNAscan-SE exon 40 115 . - . ID=exon-L8R42_000639-1;Parent=rna-L8R42_000639;anticodon=(pos:complement(80..82));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000639;product=tRNA-Val DAFVNP010000007.1 tpg gene 374 1789 . + . ID=gene-L8R42_000640;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=L8R42_000640 DAFVNP010000007.1 Protein Homology CDS 374 1789 . + 0 ID=cds-HBQ7388767.1;Parent=gene-L8R42_000640;Dbxref=NCBI_GP:HBQ7388767.1;Name=HBQ7388767.1;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=L8R42_000640;product=glutamate--tRNA ligase;protein_id=HBQ7388767.1;transl_table=11 DAFVNP010000007.1 tpg gene 1843 2235 . - . ID=gene-L8R42_000641;Name=L8R42_000641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000641 DAFVNP010000007.1 Protein Homology CDS 1843 2235 . - 0 ID=cds-HBQ7388768.1;Parent=gene-L8R42_000641;Dbxref=NCBI_GP:HBQ7388768.1;Name=HBQ7388768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=L8R42_000641;product=putative DNA-binding transcriptional regulator;protein_id=HBQ7388768.1;transl_table=11 DAFVNP010000007.1 tpg gene 2237 2599 . - . ID=gene-L8R42_000642;Name=L8R42_000642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000642 DAFVNP010000007.1 Protein Homology CDS 2237 2599 . - 0 ID=cds-HBQ7388769.1;Parent=gene-L8R42_000642;Dbxref=NCBI_GP:HBQ7388769.1;Name=HBQ7388769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=L8R42_000642;product=putative DNA-binding transcriptional regulator;protein_id=HBQ7388769.1;transl_table=11 DAFVNP010000007.1 tpg gene 2821 2896 . + . ID=gene-L8R42_000643;Name=L8R42_000643;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000643 DAFVNP010000007.1 tRNAscan-SE tRNA 2821 2896 . + . ID=rna-L8R42_000643;Parent=gene-L8R42_000643;anticodon=(pos:2854..2856);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000643;product=tRNA-Ala DAFVNP010000007.1 tRNAscan-SE exon 2821 2896 . + . ID=exon-L8R42_000643-1;Parent=rna-L8R42_000643;anticodon=(pos:2854..2856);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000643;product=tRNA-Ala DAFVNP010000007.1 tpg gene 3087 5276 . + . ID=gene-L8R42_000644;Name=L8R42_000644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000644 DAFVNP010000007.1 Protein Homology CDS 3087 5276 . + 0 ID=cds-HBQ7388770.1;Parent=gene-L8R42_000644;Dbxref=NCBI_GP:HBQ7388770.1;Name=HBQ7388770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=L8R42_000644;product=sensor domain-containing phosphodiesterase;protein_id=HBQ7388770.1;transl_table=11 DAFVNP010000007.1 tpg gene 5329 6531 . - . ID=gene-L8R42_000645;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=L8R42_000645 DAFVNP010000007.1 Protein Homology CDS 5329 6531 . - 0 ID=cds-HBQ7388771.1;Parent=gene-L8R42_000645;Dbxref=NCBI_GP:HBQ7388771.1;Name=HBQ7388771.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=L8R42_000645;product=nucleoside permease NupC;protein_id=HBQ7388771.1;transl_table=11 DAFVNP010000007.1 tpg gene 6874 8115 . + . ID=gene-L8R42_000646;Name=L8R42_000646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000646 DAFVNP010000007.1 Protein Homology CDS 6874 8115 . + 0 ID=cds-HBQ7388772.1;Parent=gene-L8R42_000646;Dbxref=NCBI_GP:HBQ7388772.1;Name=HBQ7388772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=L8R42_000646;product=Nramp family divalent metal transporter;protein_id=HBQ7388772.1;transl_table=11 DAFVNP010000007.1 tpg gene 8176 8502 . - . ID=gene-L8R42_000647;Name=L8R42_000647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000647 DAFVNP010000007.1 Protein Homology CDS 8176 8502 . - 0 ID=cds-HBQ7388773.1;Parent=gene-L8R42_000647;Dbxref=NCBI_GP:HBQ7388773.1;Name=HBQ7388773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=L8R42_000647;product=DUF2502 domain-containing protein;protein_id=HBQ7388773.1;transl_table=11 DAFVNP010000007.1 tpg gene 8616 9614 . - . ID=gene-L8R42_000648;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=L8R42_000648 DAFVNP010000007.1 Protein Homology CDS 8616 9614 . - 0 ID=cds-HBQ7388774.1;Parent=gene-L8R42_000648;Dbxref=NCBI_GP:HBQ7388774.1;Name=HBQ7388774.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=L8R42_000648;product=L-glyceraldehyde 3-phosphate reductase;protein_id=HBQ7388774.1;transl_table=11 DAFVNP010000007.1 tpg gene 9794 11446 . + . ID=gene-L8R42_000649;Name=L8R42_000649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000649 DAFVNP010000007.1 Protein Homology CDS 9794 11446 . + 0 ID=cds-HBQ7388775.1;Parent=gene-L8R42_000649;Dbxref=NCBI_GP:HBQ7388775.1;Name=HBQ7388775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=L8R42_000649;product=alpha-keto acid decarboxylase family protein;protein_id=HBQ7388775.1;transl_table=11 DAFVNP010000007.1 tpg gene 11466 12701 . - . ID=gene-L8R42_000650;Name=L8R42_000650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000650 DAFVNP010000007.1 Protein Homology CDS 11466 12701 . - 0 ID=cds-HBQ7388776.1;Parent=gene-L8R42_000650;Dbxref=NCBI_GP:HBQ7388776.1;Name=HBQ7388776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=L8R42_000650;product=ion channel protein;protein_id=HBQ7388776.1;transl_table=11 DAFVNP010000007.1 tpg gene 12905 13870 . + . ID=gene-L8R42_000651;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=L8R42_000651 DAFVNP010000007.1 Protein Homology CDS 12905 13870 . + 0 ID=cds-HBQ7388777.1;Parent=gene-L8R42_000651;Dbxref=NCBI_GP:HBQ7388777.1;Name=HBQ7388777.1;gbkey=CDS;gene=glk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=L8R42_000651;product=glucokinase;protein_id=HBQ7388777.1;transl_table=11 DAFVNP010000007.1 tpg gene 14591 15829 . + . ID=gene-L8R42_000652;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=L8R42_000652 DAFVNP010000007.1 Protein Homology CDS 14591 15829 . + 0 ID=cds-HBQ7388778.1;Parent=gene-L8R42_000652;Dbxref=NCBI_GP:HBQ7388778.1;Name=HBQ7388778.1;gbkey=CDS;gene=alaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=L8R42_000652;product=alanine transaminase;protein_id=HBQ7388778.1;transl_table=11 DAFVNP010000007.1 tpg gene 15879 15950 . - . ID=gene-L8R42_000653;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=L8R42_000653 DAFVNP010000007.1 Protein Homology CDS 15879 15950 . - 0 ID=cds-HBQ7388779.1;Parent=gene-L8R42_000653;Dbxref=NCBI_GP:HBQ7388779.1;Name=HBQ7388779.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=L8R42_000653;product=membrane protein YpdK;protein_id=HBQ7388779.1;transl_table=11 DAFVNP010000007.1 tpg gene 16353 17273 . - . ID=gene-L8R42_000654;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=L8R42_000654 DAFVNP010000007.1 Protein Homology CDS 16353 17273 . - 0 ID=cds-HBQ7388780.1;Parent=gene-L8R42_000654;Dbxref=NCBI_GP:HBQ7388780.1;Name=HBQ7388780.1;gbkey=CDS;gene=lpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=L8R42_000654;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=HBQ7388780.1;transl_table=11 DAFVNP010000007.1 tpg gene 17795 18037 . + . ID=gene-L8R42_000655;Name=L8R42_000655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000655 DAFVNP010000007.1 Protein Homology CDS 17795 18037 . + 0 ID=cds-HBQ7388781.1;Parent=gene-L8R42_000655;Dbxref=NCBI_GP:HBQ7388781.1;Name=HBQ7388781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=L8R42_000655;product=YfdY family protein;protein_id=HBQ7388781.1;transl_table=11 DAFVNP010000007.1 tpg gene 18276 19667 . - . ID=gene-L8R42_000656;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=L8R42_000656 DAFVNP010000007.1 Protein Homology CDS 18276 19667 . - 0 ID=cds-HBQ7388782.1;Parent=gene-L8R42_000656;Dbxref=NCBI_GP:HBQ7388782.1;Name=HBQ7388782.1;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=L8R42_000656;product=phosphoglycerate transporter PgtP;protein_id=HBQ7388782.1;transl_table=11 DAFVNP010000007.1 tpg gene 20103 21296 . + . ID=gene-L8R42_000657;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=L8R42_000657 DAFVNP010000007.1 Protein Homology CDS 20103 21296 . + 0 ID=cds-HBQ7388783.1;Parent=gene-L8R42_000657;Dbxref=NCBI_GP:HBQ7388783.1;Name=HBQ7388783.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=L8R42_000657;product=phosphoglycerate transport regulator PgtC;protein_id=HBQ7388783.1;transl_table=11 DAFVNP010000007.1 tpg gene 21293 23299 . + . ID=gene-L8R42_000658;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=L8R42_000658 DAFVNP010000007.1 Protein Homology CDS 21293 23299 . + 0 ID=cds-HBQ7388784.1;Parent=gene-L8R42_000658;Dbxref=NCBI_GP:HBQ7388784.1;Name=HBQ7388784.1;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=L8R42_000658;product=two-component system sensor histidine kinase PgtB;protein_id=HBQ7388784.1;transl_table=11 DAFVNP010000007.1 tpg gene 23289 24536 . + . ID=gene-L8R42_000659;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=L8R42_000659 DAFVNP010000007.1 Protein Homology CDS 23289 24536 . + 0 ID=cds-HBQ7388785.1;Parent=gene-L8R42_000659;Dbxref=NCBI_GP:HBQ7388785.1;Name=HBQ7388785.1;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=L8R42_000659;product=two-component system response regulator PgtA;protein_id=HBQ7388785.1;transl_table=11 DAFVNP010000007.1 tpg gene 24804 25742 . + . ID=gene-L8R42_000660;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=L8R42_000660 DAFVNP010000007.1 Protein Homology CDS 24804 25742 . + 0 ID=cds-HBQ7388786.1;Parent=gene-L8R42_000660;Dbxref=NCBI_GP:HBQ7388786.1;Name=HBQ7388786.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=L8R42_000660;product=omptin family outer membrane protease PgtE;protein_id=HBQ7388786.1;transl_table=11 DAFVNP010000007.1 tpg gene 25899 25973 . - . ID=gene-L8R42_000661;Name=L8R42_000661;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000661 DAFVNP010000007.1 tRNAscan-SE tRNA 25899 25973 . - . ID=rna-L8R42_000661;Parent=gene-L8R42_000661;anticodon=(pos:complement(25938..25940));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000661;product=tRNA-Arg DAFVNP010000007.1 tRNAscan-SE exon 25899 25973 . - . ID=exon-L8R42_000661-1;Parent=rna-L8R42_000661;anticodon=(pos:complement(25938..25940));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000661;product=tRNA-Arg DAFVNP010000007.1 tpg gene 26049 26990 . - . ID=gene-L8R42_000662;Name=L8R42_000662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000662 DAFVNP010000007.1 Protein Homology CDS 26049 26990 . - 0 ID=cds-HBQ7388787.1;Parent=gene-L8R42_000662;Dbxref=NCBI_GP:HBQ7388787.1;Name=HBQ7388787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=L8R42_000662;product=formate/nitrite transporter family protein;protein_id=HBQ7388787.1;transl_table=11 DAFVNP010000007.1 tpg gene 27279 28034 . + . ID=gene-L8R42_000663;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=L8R42_000663 DAFVNP010000007.1 Protein Homology CDS 27279 28034 . + 0 ID=cds-HBQ7388788.1;Parent=gene-L8R42_000663;Dbxref=NCBI_GP:HBQ7388788.1;Name=HBQ7388788.1;gbkey=CDS;gene=mlaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=L8R42_000663;product=phospholipid-binding lipoprotein MlaA;protein_id=HBQ7388788.1;transl_table=11 DAFVNP010000007.1 tpg gene 28095 29402 . - . ID=gene-L8R42_000664;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=L8R42_000664 DAFVNP010000007.1 Protein Homology CDS 28095 29402 . - 0 ID=cds-HBQ7388789.1;Parent=gene-L8R42_000664;Dbxref=NCBI_GP:HBQ7388789.1;Name=HBQ7388789.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=L8R42_000664;product=long-chain fatty acid transporter FadL;protein_id=HBQ7388789.1;transl_table=11 DAFVNP010000007.1 tpg gene 29773 30057 . + . ID=gene-L8R42_000665;Name=L8R42_000665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000665 DAFVNP010000007.1 Protein Homology CDS 29773 30057 . + 0 ID=cds-HBQ7388790.1;Parent=gene-L8R42_000665;Dbxref=NCBI_GP:HBQ7388790.1;Name=HBQ7388790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=L8R42_000665;product=YfcZ/YiiS family protein;protein_id=HBQ7388790.1;transl_table=11 DAFVNP010000007.1 tpg gene 30235 31545 . + . ID=gene-L8R42_000666;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=L8R42_000666 DAFVNP010000007.1 Protein Homology CDS 30235 31545 . + 0 ID=cds-HBQ7388791.1;Parent=gene-L8R42_000666;Dbxref=NCBI_GP:HBQ7388791.1;Name=HBQ7388791.1;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=L8R42_000666;product=acetyl-CoA C-acyltransferase FadI;protein_id=HBQ7388791.1;transl_table=11 DAFVNP010000007.1 tpg gene 31545 33692 . + . ID=gene-L8R42_000667;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=L8R42_000667 DAFVNP010000007.1 Protein Homology CDS 31545 33692 . + 0 ID=cds-HBQ7388792.1;Parent=gene-L8R42_000667;Dbxref=NCBI_GP:HBQ7388792.1;Name=HBQ7388792.1;gbkey=CDS;gene=fadJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=L8R42_000667;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=HBQ7388792.1;transl_table=11 DAFVNP010000007.1 tpg gene 33901 34386 . + . ID=gene-L8R42_000668;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=L8R42_000668 DAFVNP010000007.1 Protein Homology CDS 33901 34386 . + 0 ID=cds-HBQ7388793.1;Parent=gene-L8R42_000668;Dbxref=NCBI_GP:HBQ7388793.1;Name=HBQ7388793.1;gbkey=CDS;gene=sixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=L8R42_000668;product=phosphohistidine phosphatase SixA;protein_id=HBQ7388793.1;transl_table=11 DAFVNP010000007.1 tpg gene 34486 35037 . - . ID=gene-L8R42_000669;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=L8R42_000669 DAFVNP010000007.1 Protein Homology CDS 34486 35037 . - 0 ID=cds-HBQ7388794.1;Parent=gene-L8R42_000669;Dbxref=NCBI_GP:HBQ7388794.1;Name=HBQ7388794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=L8R42_000669;product=endonuclease SmrB;protein_id=HBQ7388794.1;transl_table=11 DAFVNP010000007.1 tpg gene 35203 36135 . + . ID=gene-L8R42_000670;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=L8R42_000670 DAFVNP010000007.1 Protein Homology CDS 35203 36135 . + 0 ID=cds-HBQ7388795.1;Parent=gene-L8R42_000670;Dbxref=NCBI_GP:HBQ7388795.1;Name=HBQ7388795.1;gbkey=CDS;gene=prmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=L8R42_000670;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=HBQ7388795.1;transl_table=11 DAFVNP010000007.1 tpg gene 36171 37256 . + . ID=gene-L8R42_000671;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=L8R42_000671 DAFVNP010000007.1 Protein Homology CDS 36171 37256 . + 0 ID=cds-HBQ7388796.1;Parent=gene-L8R42_000671;Dbxref=NCBI_GP:HBQ7388796.1;Name=HBQ7388796.1;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=L8R42_000671;product=chorismate synthase;protein_id=HBQ7388796.1;transl_table=11 DAFVNP010000007.1 tpg gene 37260 38084 . + . ID=gene-L8R42_000672;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=L8R42_000672 DAFVNP010000007.1 Protein Homology CDS 37260 38084 . + 0 ID=cds-HBQ7388797.1;Parent=gene-L8R42_000672;Dbxref=NCBI_GP:HBQ7388797.1;Name=HBQ7388797.1;gbkey=CDS;gene=mepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=L8R42_000672;product=penicillin-insensitive murein endopeptidase;protein_id=HBQ7388797.1;transl_table=11 DAFVNP010000007.1 tpg gene 38084 38893 . + . ID=gene-L8R42_000673;Name=L8R42_000673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000673 DAFVNP010000007.1 Protein Homology CDS 38084 38893 . + 0 ID=cds-HBQ7388798.1;Parent=gene-L8R42_000673;Dbxref=NCBI_GP:HBQ7388798.1;Name=HBQ7388798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=L8R42_000673;product=sulfite exporter TauE/SafE family protein;protein_id=HBQ7388798.1;transl_table=11 DAFVNP010000007.1 tpg gene 38893 39441 . + . ID=gene-L8R42_000674;Name=L8R42_000674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000674 DAFVNP010000007.1 Protein Homology CDS 38893 39441 . + 0 ID=cds-HBQ7388799.1;Parent=gene-L8R42_000674;Dbxref=NCBI_GP:HBQ7388799.1;Name=HBQ7388799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=L8R42_000674;product=elongation factor P hydroxylase;protein_id=HBQ7388799.1;transl_table=11 DAFVNP010000007.1 tpg gene 39474 39749 . + . ID=gene-L8R42_000675;Name=L8R42_000675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000675 DAFVNP010000007.1 Protein Homology CDS 39474 39749 . + 0 ID=cds-HBQ7388800.1;Parent=gene-L8R42_000675;Dbxref=NCBI_GP:HBQ7388800.1;Name=HBQ7388800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=L8R42_000675;product=YfcL family protein;protein_id=HBQ7388800.1;transl_table=11 DAFVNP010000007.1 tpg gene 39801 41801 . - . ID=gene-L8R42_000676;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=L8R42_000676 DAFVNP010000007.1 Protein Homology CDS 39801 41801 . - 0 ID=cds-HBQ7388801.1;Parent=gene-L8R42_000676;Dbxref=NCBI_GP:HBQ7388801.1;Name=HBQ7388801.1;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=L8R42_000676;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=HBQ7388801.1;transl_table=11 DAFVNP010000007.1 tpg gene 41961 43175 . + . ID=gene-L8R42_000677;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=L8R42_000677 DAFVNP010000007.1 Protein Homology CDS 41961 43175 . + 0 ID=cds-HBQ7388802.1;Parent=gene-L8R42_000677;Dbxref=NCBI_GP:HBQ7388802.1;Name=HBQ7388802.1;gbkey=CDS;gene=fabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=L8R42_000677;product=beta-ketoacyl-ACP synthase I;protein_id=HBQ7388802.1;transl_table=11 DAFVNP010000007.1 tpg gene 43273 43929 . + . ID=gene-L8R42_000678;Name=L8R42_000678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000678 DAFVNP010000007.1 Protein Homology CDS 43273 43929 . + 0 ID=cds-HBQ7388803.1;Parent=gene-L8R42_000678;Dbxref=NCBI_GP:HBQ7388803.1;Name=HBQ7388803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=L8R42_000678;product=CPBP family intramembrane metalloprotease;protein_id=HBQ7388803.1;transl_table=11 DAFVNP010000007.1 tpg gene 43996 44514 . - . ID=gene-L8R42_000679;Name=L8R42_000679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000679 DAFVNP010000007.1 Protein Homology CDS 43996 44514 . - 0 ID=cds-HBQ7388804.1;Parent=gene-L8R42_000679;Dbxref=NCBI_GP:HBQ7388804.1;Name=HBQ7388804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=L8R42_000679;product=YbjP/YqhG family protein;protein_id=HBQ7388804.1;transl_table=11 DAFVNP010000007.1 tpg pseudogene 44514 44813 . - . ID=gene-L8R42_000680;Name=L8R42_000680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_000680;pseudo=true DAFVNP010000007.1 Protein Homology CDS 44514 44813 . - 0 ID=cds-L8R42_000680;Parent=gene-L8R42_000680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=L8R42_000680;product=C40 family peptidase;pseudo=true;transl_table=11 DAFVNP010000007.1 tpg gene 44726 44908 . - . ID=gene-L8R42_000681;Name=L8R42_000681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000681 DAFVNP010000007.1 Protein Homology CDS 44726 44908 . - 0 ID=cds-HBQ7388805.1;Parent=gene-L8R42_000681;Dbxref=NCBI_GP:HBQ7388805.1;Name=HBQ7388805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433432.1;locus_tag=L8R42_000681;product=helix-turn-helix domain-containing protein;protein_id=HBQ7388805.1;transl_table=11 DAFVNP010000007.1 tpg gene 45081 45455 . + . ID=gene-L8R42_000682;Name=L8R42_000682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000682 DAFVNP010000007.1 Protein Homology CDS 45081 45455 . + 0 ID=cds-HBQ7388806.1;Parent=gene-L8R42_000682;Dbxref=NCBI_GP:HBQ7388806.1;Name=HBQ7388806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=L8R42_000682;product=hypothetical protein;protein_id=HBQ7388806.1;transl_table=11 DAFVNP010000007.1 tpg gene 45635 46813 . + . ID=gene-L8R42_000683;Name=L8R42_000683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000683 DAFVNP010000007.1 Protein Homology CDS 45635 46813 . + 0 ID=cds-HBQ7388807.1;Parent=gene-L8R42_000683;Dbxref=NCBI_GP:HBQ7388807.1;Name=HBQ7388807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=L8R42_000683;product=MFS transporter;protein_id=HBQ7388807.1;transl_table=11 DAFVNP010000007.1 tpg gene 46810 47811 . - . ID=gene-L8R42_000684;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=L8R42_000684 DAFVNP010000007.1 Protein Homology CDS 46810 47811 . - 0 ID=cds-HBQ7388808.1;Parent=gene-L8R42_000684;Dbxref=NCBI_GP:HBQ7388808.1;Name=HBQ7388808.1;gbkey=CDS;gene=flk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=L8R42_000684;product=flagella biosynthesis regulator Flk;protein_id=HBQ7388808.1;transl_table=11 DAFVNP010000007.1 tpg gene 47915 49051 . + . ID=gene-L8R42_000685;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=L8R42_000685 DAFVNP010000007.1 Protein Homology CDS 47915 49051 . + 0 ID=cds-HBQ7388809.1;Parent=gene-L8R42_000685;Dbxref=NCBI_GP:HBQ7388809.1;Name=HBQ7388809.1;gbkey=CDS;gene=pdxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=L8R42_000685;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=HBQ7388809.1;transl_table=11 DAFVNP010000007.1 tpg gene 49119 50132 . + . ID=gene-L8R42_000686;Name=L8R42_000686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000686 DAFVNP010000007.1 Protein Homology CDS 49119 50132 . + 0 ID=cds-HBQ7388810.1;Parent=gene-L8R42_000686;Dbxref=NCBI_GP:HBQ7388810.1;Name=HBQ7388810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=L8R42_000686;product=aspartate-semialdehyde dehydrogenase;protein_id=HBQ7388810.1;transl_table=11 DAFVNP010000007.1 tpg gene 50132 50944 . + . ID=gene-L8R42_000687;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=L8R42_000687 DAFVNP010000007.1 Protein Homology CDS 50132 50944 . + 0 ID=cds-HBQ7388811.1;Parent=gene-L8R42_000687;Dbxref=NCBI_GP:HBQ7388811.1;Name=HBQ7388811.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=L8R42_000687;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=HBQ7388811.1;transl_table=11 DAFVNP010000007.1 tpg gene 50993 51652 . + . ID=gene-L8R42_000688;Name=L8R42_000688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000688 DAFVNP010000007.1 Protein Homology CDS 50993 51652 . + 0 ID=cds-HBQ7388812.1;Parent=gene-L8R42_000688;Dbxref=NCBI_GP:HBQ7388812.1;Name=HBQ7388812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=L8R42_000688;product=DedA family protein;protein_id=HBQ7388812.1;transl_table=11 DAFVNP010000007.1 tpg gene 51802 52716 . + . ID=gene-L8R42_000689;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=L8R42_000689 DAFVNP010000007.1 Protein Homology CDS 51802 52716 . + 0 ID=cds-HBQ7388813.1;Parent=gene-L8R42_000689;Dbxref=NCBI_GP:HBQ7388813.1;Name=HBQ7388813.1;gbkey=CDS;gene=accD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=L8R42_000689;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=HBQ7388813.1;transl_table=11 DAFVNP010000007.1 tpg gene 52784 54052 . + . ID=gene-L8R42_000690;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=L8R42_000690 DAFVNP010000007.1 Protein Homology CDS 52784 54052 . + 0 ID=cds-HBQ7388814.1;Parent=gene-L8R42_000690;Dbxref=NCBI_GP:HBQ7388814.1;Name=HBQ7388814.1;gbkey=CDS;gene=folC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=L8R42_000690;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=HBQ7388814.1;transl_table=11 DAFVNP010000007.1 tpg gene 54042 54716 . + . ID=gene-L8R42_000691;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=L8R42_000691 DAFVNP010000007.1 Protein Homology CDS 54042 54716 . + 0 ID=cds-HBQ7388815.1;Parent=gene-L8R42_000691;Dbxref=NCBI_GP:HBQ7388815.1;Name=HBQ7388815.1;gbkey=CDS;gene=dedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=L8R42_000691;product=cell division protein DedD;protein_id=HBQ7388815.1;transl_table=11 DAFVNP010000007.1 tpg gene 55027 55515 . + . ID=gene-L8R42_000692;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=L8R42_000692 DAFVNP010000007.1 Protein Homology CDS 55027 55515 . + 0 ID=cds-HBQ7388816.1;Parent=gene-L8R42_000692;Dbxref=NCBI_GP:HBQ7388816.1;Name=HBQ7388816.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=L8R42_000692;product=colicin V production protein;protein_id=HBQ7388816.1;transl_table=11 DAFVNP010000007.1 tpg gene 55553 57070 . + . ID=gene-L8R42_000693;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=L8R42_000693 DAFVNP010000007.1 Protein Homology CDS 55553 57070 . + 0 ID=cds-HBQ7388817.1;Parent=gene-L8R42_000693;Dbxref=NCBI_GP:HBQ7388817.1;Name=HBQ7388817.1;gbkey=CDS;gene=purF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=L8R42_000693;product=amidophosphoribosyltransferase;protein_id=HBQ7388817.1;transl_table=11 DAFVNP010000007.1 tpg gene 57106 58533 . - . ID=gene-L8R42_000694;Name=L8R42_000694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000694 DAFVNP010000007.1 Protein Homology CDS 57106 58533 . - 0 ID=cds-HBQ7388818.1;Parent=gene-L8R42_000694;Dbxref=NCBI_GP:HBQ7388818.1;Name=HBQ7388818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=L8R42_000694;product=sigma-54-dependent transcriptional regulator;protein_id=HBQ7388818.1;transl_table=11 DAFVNP010000007.1 tpg gene 58744 60141 . + . ID=gene-L8R42_000695;Name=L8R42_000695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000695 DAFVNP010000007.1 Protein Homology CDS 58744 60141 . + 0 ID=cds-HBQ7388819.1;Parent=gene-L8R42_000695;Dbxref=NCBI_GP:HBQ7388819.1;Name=HBQ7388819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=L8R42_000695;product=alanine racemase;protein_id=HBQ7388819.1;transl_table=11 DAFVNP010000007.1 tpg gene 60232 61653 . + . ID=gene-L8R42_000696;Name=L8R42_000696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000696 DAFVNP010000007.1 Protein Homology CDS 60232 61653 . + 0 ID=cds-HBQ7388820.1;Parent=gene-L8R42_000696;Dbxref=NCBI_GP:HBQ7388820.1;Name=HBQ7388820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=L8R42_000696;product=amino acid permease;protein_id=HBQ7388820.1;transl_table=11 DAFVNP010000007.1 tpg gene 61655 62758 . + . ID=gene-L8R42_000697;Name=L8R42_000697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000697 DAFVNP010000007.1 Protein Homology CDS 61655 62758 . + 0 ID=cds-HBQ7388821.1;Parent=gene-L8R42_000697;Dbxref=NCBI_GP:HBQ7388821.1;Name=HBQ7388821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=L8R42_000697;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=HBQ7388821.1;transl_table=11 DAFVNP010000007.1 tpg gene 62822 64228 . + . ID=gene-L8R42_000698;Name=L8R42_000698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000698 DAFVNP010000007.1 Protein Homology CDS 62822 64228 . + 0 ID=cds-HBQ7388822.1;Parent=gene-L8R42_000698;Dbxref=NCBI_GP:HBQ7388822.1;Name=HBQ7388822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=L8R42_000698;product=amino acid permease;protein_id=HBQ7388822.1;transl_table=11 DAFVNP010000007.1 tpg gene 64255 64824 . + . ID=gene-L8R42_000699;Name=L8R42_000699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000699 DAFVNP010000007.1 Protein Homology CDS 64255 64824 . + 0 ID=cds-HBQ7388823.1;Parent=gene-L8R42_000699;Dbxref=NCBI_GP:HBQ7388823.1;Name=HBQ7388823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=L8R42_000699;product=UbiX family flavin prenyltransferase;protein_id=HBQ7388823.1;transl_table=11 DAFVNP010000007.1 tpg gene 65113 65895 . + . ID=gene-L8R42_000700;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=L8R42_000700 DAFVNP010000007.1 Protein Homology CDS 65113 65895 . + 0 ID=cds-HBQ7388824.1;Parent=gene-L8R42_000700;Dbxref=NCBI_GP:HBQ7388824.1;Name=HBQ7388824.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=L8R42_000700;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=HBQ7388824.1;transl_table=11 DAFVNP010000007.1 tpg gene 66133 66915 . + . ID=gene-L8R42_000701;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=L8R42_000701 DAFVNP010000007.1 Protein Homology CDS 66133 66915 . + 0 ID=cds-HBQ7388825.1;Parent=gene-L8R42_000701;Dbxref=NCBI_GP:HBQ7388825.1;Name=HBQ7388825.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=L8R42_000701;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=HBQ7388825.1;transl_table=11 DAFVNP010000007.1 tpg gene 67096 67782 . + . ID=gene-L8R42_000702;Name=L8R42_000702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000702 DAFVNP010000007.1 Protein Homology CDS 67096 67782 . + 0 ID=cds-HBQ7388826.1;Parent=gene-L8R42_000702;Dbxref=NCBI_GP:HBQ7388826.1;Name=HBQ7388826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=L8R42_000702;product=histidine ABC transporter permease HisQ;protein_id=HBQ7388826.1;transl_table=11 DAFVNP010000007.1 tpg gene 67779 68486 . + . ID=gene-L8R42_000703;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=L8R42_000703 DAFVNP010000007.1 Protein Homology CDS 67779 68486 . + 0 ID=cds-HBQ7388827.1;Parent=gene-L8R42_000703;Dbxref=NCBI_GP:HBQ7388827.1;Name=HBQ7388827.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=L8R42_000703;product=histidine ABC transporter permease HisM;protein_id=HBQ7388827.1;transl_table=11 DAFVNP010000007.1 tpg gene 68500 69273 . + . ID=gene-L8R42_000704;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=L8R42_000704 DAFVNP010000007.1 Protein Homology CDS 68500 69273 . + 0 ID=cds-HBQ7388828.1;Parent=gene-L8R42_000704;Dbxref=NCBI_GP:HBQ7388828.1;Name=HBQ7388828.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=L8R42_000704;product=histidine ABC transporter ATP-binding protein HisP;protein_id=HBQ7388828.1;transl_table=11 DAFVNP010000007.1 tpg gene 69325 70218 . - . ID=gene-L8R42_000705;Name=L8R42_000705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000705 DAFVNP010000007.1 Protein Homology CDS 69325 70218 . - 0 ID=cds-HBQ7388829.1;Parent=gene-L8R42_000705;Dbxref=NCBI_GP:HBQ7388829.1;Name=HBQ7388829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=L8R42_000705;product=TIGR01777 family oxidoreductase;protein_id=HBQ7388829.1;transl_table=11 DAFVNP010000007.1 tpg gene 70344 70991 . - . ID=gene-L8R42_000706;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=L8R42_000706 DAFVNP010000007.1 Protein Homology CDS 70344 70991 . - 0 ID=cds-HBQ7388830.1;Parent=gene-L8R42_000706;Dbxref=NCBI_GP:HBQ7388830.1;Name=HBQ7388830.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=L8R42_000706;product=GSH-dependent disulfide bond oxidoreductase;protein_id=HBQ7388830.1;transl_table=11 DAFVNP010000007.1 tpg gene 71134 71778 . + . ID=gene-L8R42_000707;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=L8R42_000707 DAFVNP010000007.1 Protein Homology CDS 71134 71778 . + 0 ID=cds-HBQ7388831.1;Parent=gene-L8R42_000707;Dbxref=NCBI_GP:HBQ7388831.1;Name=HBQ7388831.1;gbkey=CDS;gene=yfcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=L8R42_000707;product=glutathione transferase;protein_id=HBQ7388831.1;transl_table=11 DAFVNP010000007.1 tpg gene 71834 72385 . + . ID=gene-L8R42_000708;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=L8R42_000708 DAFVNP010000007.1 Protein Homology CDS 71834 72385 . + 0 ID=cds-HBQ7388832.1;Parent=gene-L8R42_000708;Dbxref=NCBI_GP:HBQ7388832.1;Name=HBQ7388832.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=L8R42_000708;product=phosphodiesterase;protein_id=HBQ7388832.1;transl_table=11 DAFVNP010000007.1 tpg gene 72442 72996 . + . ID=gene-L8R42_000709;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=L8R42_000709 DAFVNP010000007.1 Protein Homology CDS 72442 72996 . + 0 ID=cds-HBQ7388833.1;Parent=gene-L8R42_000709;Dbxref=NCBI_GP:HBQ7388833.1;Name=HBQ7388833.1;gbkey=CDS;gene=yfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=L8R42_000709;product=NUDIX hydrolase YfcD;protein_id=HBQ7388833.1;transl_table=11 DAFVNP010000007.1 tpg gene 73002 74021 . - . ID=gene-L8R42_000710;Name=L8R42_000710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000710 DAFVNP010000007.1 Protein Homology CDS 73002 74021 . - 0 ID=cds-HBQ7388834.1;Parent=gene-L8R42_000710;Dbxref=NCBI_GP:HBQ7388834.1;Name=HBQ7388834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=L8R42_000710;product=LacI family DNA-binding transcriptional regulator;protein_id=HBQ7388834.1;transl_table=11 DAFVNP010000007.1 tpg gene 74274 74717 . + . ID=gene-L8R42_000711;Name=L8R42_000711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000711 DAFVNP010000007.1 Protein Homology CDS 74274 74717 . + 0 ID=cds-HBQ7388835.1;Parent=gene-L8R42_000711;Dbxref=NCBI_GP:HBQ7388835.1;Name=HBQ7388835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=L8R42_000711;product=PTS sugar transporter subunit IIA;protein_id=HBQ7388835.1;transl_table=11 DAFVNP010000007.1 tpg gene 74798 75070 . + . ID=gene-L8R42_000712;Name=L8R42_000712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000712 DAFVNP010000007.1 Protein Homology CDS 74798 75070 . + 0 ID=cds-HBQ7388836.1;Parent=gene-L8R42_000712;Dbxref=NCBI_GP:HBQ7388836.1;Name=HBQ7388836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=L8R42_000712;product=PTS sugar transporter subunit IIB;protein_id=HBQ7388836.1;transl_table=11 DAFVNP010000007.1 tpg gene 75091 76482 . + . ID=gene-L8R42_000713;Name=L8R42_000713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000713 DAFVNP010000007.1 Protein Homology CDS 75091 76482 . + 0 ID=cds-HBQ7388837.1;Parent=gene-L8R42_000713;Dbxref=NCBI_GP:HBQ7388837.1;Name=HBQ7388837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=L8R42_000713;product=PTS ascorbate transporter subunit IIC;protein_id=HBQ7388837.1;transl_table=11 DAFVNP010000007.1 tpg gene 76479 77309 . + . ID=gene-L8R42_000714;Name=L8R42_000714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000714 DAFVNP010000007.1 Protein Homology CDS 76479 77309 . + 0 ID=cds-HBQ7388838.1;Parent=gene-L8R42_000714;Dbxref=NCBI_GP:HBQ7388838.1;Name=HBQ7388838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=L8R42_000714;product=transketolase;protein_id=HBQ7388838.1;transl_table=11 DAFVNP010000007.1 tpg gene 77302 78255 . + . ID=gene-L8R42_000715;Name=L8R42_000715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000715 DAFVNP010000007.1 Protein Homology CDS 77302 78255 . + 0 ID=cds-HBQ7388839.1;Parent=gene-L8R42_000715;Dbxref=NCBI_GP:HBQ7388839.1;Name=HBQ7388839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=L8R42_000715;product=transketolase family protein;protein_id=HBQ7388839.1;transl_table=11 DAFVNP010000007.1 tpg gene 78304 79824 . - . ID=gene-L8R42_000716;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=L8R42_000716 DAFVNP010000007.1 Protein Homology CDS 78304 79824 . - 0 ID=cds-HBQ7388840.1;Parent=gene-L8R42_000716;Dbxref=NCBI_GP:HBQ7388840.1;Name=HBQ7388840.1;gbkey=CDS;gene=yfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=L8R42_000716;product=putative basic amino acid antiporter YfcC;protein_id=HBQ7388840.1;transl_table=11 DAFVNP010000007.1 tpg gene 80042 82186 . - . ID=gene-L8R42_000717;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=L8R42_000717 DAFVNP010000007.1 Protein Homology CDS 80042 82186 . - 0 ID=cds-HBQ7388841.1;Parent=gene-L8R42_000717;Dbxref=NCBI_GP:HBQ7388841.1;Name=HBQ7388841.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=L8R42_000717;product=phosphate acetyltransferase;protein_id=HBQ7388841.1;transl_table=11 DAFVNP010000007.1 tpg gene 82263 83465 . - . ID=gene-L8R42_000718;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=L8R42_000718 DAFVNP010000007.1 Protein Homology CDS 82263 83465 . - 0 ID=cds-HBQ7388842.1;Parent=gene-L8R42_000718;Dbxref=NCBI_GP:HBQ7388842.1;Name=HBQ7388842.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=L8R42_000718;product=acetate kinase;protein_id=HBQ7388842.1;transl_table=11 DAFVNP010000007.1 tpg gene 83805 84260 . + . ID=gene-L8R42_000719;Name=L8R42_000719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000719 DAFVNP010000007.1 Protein Homology CDS 83805 84260 . + 0 ID=cds-HBQ7388843.1;Parent=gene-L8R42_000719;Dbxref=NCBI_GP:HBQ7388843.1;Name=HBQ7388843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=L8R42_000719;product=DUF412 domain-containing protein;protein_id=HBQ7388843.1;transl_table=11 DAFVNP010000007.1 tpg gene 84343 84837 . + . ID=gene-L8R42_000720;Name=L8R42_000720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000720 DAFVNP010000007.1 Protein Homology CDS 84343 84837 . + 0 ID=cds-HBQ7388844.1;Parent=gene-L8R42_000720;Dbxref=NCBI_GP:HBQ7388844.1;Name=HBQ7388844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=L8R42_000720;product=YfbU family protein;protein_id=HBQ7388844.1;transl_table=11 DAFVNP010000007.1 tpg gene 84830 85507 . + . ID=gene-L8R42_000721;Name=L8R42_000721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000721 DAFVNP010000007.1 Protein Homology CDS 84830 85507 . + 0 ID=cds-HBQ7388845.1;Parent=gene-L8R42_000721;Dbxref=NCBI_GP:HBQ7388845.1;Name=HBQ7388845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=L8R42_000721;product=sugar phosphatase;protein_id=HBQ7388845.1;transl_table=11 DAFVNP010000007.1 tpg gene 85584 87410 . + . ID=gene-L8R42_000722;Name=L8R42_000722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000722 DAFVNP010000007.1 Protein Homology CDS 85584 87410 . + 0 ID=cds-HBQ7388846.1;Parent=gene-L8R42_000722;Dbxref=NCBI_GP:HBQ7388846.1;Name=HBQ7388846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=L8R42_000722;product=SLC13 family permease;protein_id=HBQ7388846.1;transl_table=11 DAFVNP010000007.1 tpg gene 87501 88100 . - . ID=gene-L8R42_000723;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=L8R42_000723 DAFVNP010000007.1 Protein Homology CDS 87501 88100 . - 0 ID=cds-HBQ7388847.1;Parent=gene-L8R42_000723;Dbxref=NCBI_GP:HBQ7388847.1;Name=HBQ7388847.1;gbkey=CDS;gene=yfbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=L8R42_000723;product=5'-deoxynucleotidase;protein_id=HBQ7388847.1;transl_table=11 DAFVNP010000007.1 tpg gene 88194 89408 . - . ID=gene-L8R42_000724;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=L8R42_000724 DAFVNP010000007.1 Protein Homology CDS 88194 89408 . - 0 ID=cds-HBQ7388848.1;Parent=gene-L8R42_000724;Dbxref=NCBI_GP:HBQ7388848.1;Name=HBQ7388848.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=L8R42_000724;product=alanine transaminase AlaA;protein_id=HBQ7388848.1;transl_table=11 ##sequence-region DAFVNP010000008.1 1 82890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000008.1 tpg region 1 82890 . + . ID=DAFVNP010000008.1:1..82890;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000008.1 tpg gene 1 168 . - . ID=gene-L8R42_000725;Name=L8R42_000725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000725;partial=true;start_range=.,1 DAFVNP010000008.1 Protein Homology CDS 1 168 . - 0 ID=cds-HBQ7388849.1;Parent=gene-L8R42_000725;Dbxref=NCBI_GP:HBQ7388849.1;Name=HBQ7388849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=L8R42_000725;partial=true;product=hypothetical protein;protein_id=HBQ7388849.1;start_range=.,1;transl_table=11 DAFVNP010000008.1 tpg gene 172 561 . - . ID=gene-L8R42_000726;Name=L8R42_000726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000726 DAFVNP010000008.1 Protein Homology CDS 172 561 . - 0 ID=cds-HBQ7388850.1;Parent=gene-L8R42_000726;Dbxref=NCBI_GP:HBQ7388850.1;Name=HBQ7388850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=L8R42_000726;product=SirB family protein;protein_id=HBQ7388850.1;transl_table=11 DAFVNP010000008.1 tpg gene 558 1391 . - . ID=gene-L8R42_000727;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=L8R42_000727 DAFVNP010000008.1 Protein Homology CDS 558 1391 . - 0 ID=cds-HBQ7388851.1;Parent=gene-L8R42_000727;Dbxref=NCBI_GP:HBQ7388851.1;Name=HBQ7388851.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=L8R42_000727;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=HBQ7388851.1;transl_table=11 DAFVNP010000008.1 tpg gene 1391 2473 . - . ID=gene-L8R42_000728;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=L8R42_000728 DAFVNP010000008.1 Protein Homology CDS 1391 2473 . - 0 ID=cds-HBQ7388852.1;Parent=gene-L8R42_000728;Dbxref=NCBI_GP:HBQ7388852.1;Name=HBQ7388852.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=L8R42_000728;product=peptide chain release factor 1;protein_id=HBQ7388852.1;transl_table=11 DAFVNP010000008.1 tpg gene 2514 3770 . - . ID=gene-L8R42_000729;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=L8R42_000729 DAFVNP010000008.1 Protein Homology CDS 2514 3770 . - 0 ID=cds-HBQ7388853.1;Parent=gene-L8R42_000729;Dbxref=NCBI_GP:HBQ7388853.1;Name=HBQ7388853.1;gbkey=CDS;gene=hemA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=L8R42_000729;product=glutamyl-tRNA reductase;protein_id=HBQ7388853.1;transl_table=11 DAFVNP010000008.1 tpg gene 4084 4707 . + . ID=gene-L8R42_000730;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=L8R42_000730 DAFVNP010000008.1 Protein Homology CDS 4084 4707 . + 0 ID=cds-HBQ7388854.1;Parent=gene-L8R42_000730;Dbxref=NCBI_GP:HBQ7388854.1;Name=HBQ7388854.1;gbkey=CDS;gene=lolB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=L8R42_000730;product=lipoprotein localization protein LolB;protein_id=HBQ7388854.1;transl_table=11 DAFVNP010000008.1 tpg gene 4704 5555 . + . ID=gene-L8R42_000731;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=L8R42_000731 DAFVNP010000008.1 Protein Homology CDS 4704 5555 . + 0 ID=cds-HBQ7388855.1;Parent=gene-L8R42_000731;Dbxref=NCBI_GP:HBQ7388855.1;Name=HBQ7388855.1;gbkey=CDS;gene=ispE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=L8R42_000731;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=HBQ7388855.1;transl_table=11 DAFVNP010000008.1 tpg gene 5821 6768 . + . ID=gene-L8R42_000732;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=L8R42_000732 DAFVNP010000008.1 Protein Homology CDS 5821 6768 . + 0 ID=cds-HBQ7388856.1;Parent=gene-L8R42_000732;Dbxref=NCBI_GP:HBQ7388856.1;Name=HBQ7388856.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=L8R42_000732;product=ribose-phosphate diphosphokinase;protein_id=HBQ7388856.1;transl_table=11 DAFVNP010000008.1 tpg gene 6893 8578 . + . ID=gene-L8R42_000733;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=L8R42_000733 DAFVNP010000008.1 Protein Homology CDS 6893 8578 . + 0 ID=cds-HBQ7388857.1;Parent=gene-L8R42_000733;Dbxref=NCBI_GP:HBQ7388857.1;Name=HBQ7388857.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=L8R42_000733;product=C4-dicarboxylic acid transporter DauA;protein_id=HBQ7388857.1;transl_table=11 DAFVNP010000008.1 tpg gene 8623 8901 . - . ID=gene-L8R42_000734;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=L8R42_000734 DAFVNP010000008.1 Protein Homology CDS 8623 8901 . - 0 ID=cds-HBQ7388858.1;Parent=gene-L8R42_000734;Dbxref=NCBI_GP:HBQ7388858.1;Name=HBQ7388858.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=L8R42_000734;product=stress-induced protein YchH;protein_id=HBQ7388858.1;transl_table=11 DAFVNP010000008.1 tpg gene 9177 9761 . + . ID=gene-L8R42_000735;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=L8R42_000735 DAFVNP010000008.1 Protein Homology CDS 9177 9761 . + 0 ID=cds-HBQ7388859.1;Parent=gene-L8R42_000735;Dbxref=NCBI_GP:HBQ7388859.1;Name=HBQ7388859.1;gbkey=CDS;gene=pth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=L8R42_000735;product=aminoacyl-tRNA hydrolase;protein_id=HBQ7388859.1;transl_table=11 DAFVNP010000008.1 tpg gene 9878 10969 . + . ID=gene-L8R42_000736;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=L8R42_000736 DAFVNP010000008.1 Protein Homology CDS 9878 10969 . + 0 ID=cds-HBQ7388860.1;Parent=gene-L8R42_000736;Dbxref=NCBI_GP:HBQ7388860.1;Name=HBQ7388860.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=L8R42_000736;product=redox-regulated ATPase YchF;protein_id=HBQ7388860.1;transl_table=11 DAFVNP010000008.1 tpg gene 11856 12623 . + . ID=gene-L8R42_000737;Name=L8R42_000737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000737 DAFVNP010000008.1 Protein Homology CDS 11856 12623 . + 0 ID=cds-HBQ7388861.1;Parent=gene-L8R42_000737;Dbxref=NCBI_GP:HBQ7388861.1;Name=HBQ7388861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137288.1;locus_tag=L8R42_000737;product=hypothetical protein;protein_id=HBQ7388861.1;transl_table=11 DAFVNP010000008.1 tpg gene 13114 14379 . - . ID=gene-L8R42_000738;Name=L8R42_000738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000738 DAFVNP010000008.1 Protein Homology CDS 13114 14379 . - 0 ID=cds-HBQ7388862.1;Parent=gene-L8R42_000738;Dbxref=NCBI_GP:HBQ7388862.1;Name=HBQ7388862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=L8R42_000738;product=DUF4427 domain-containing protein;protein_id=HBQ7388862.1;transl_table=11 DAFVNP010000008.1 tpg gene 14873 15991 . + . ID=gene-L8R42_000739;Name=L8R42_000739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000739 DAFVNP010000008.1 Protein Homology CDS 14873 15991 . + 0 ID=cds-HBQ7388863.1;Parent=gene-L8R42_000739;Dbxref=NCBI_GP:HBQ7388863.1;Name=HBQ7388863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=L8R42_000739;product=hydrogenase 1 small subunit;protein_id=HBQ7388863.1;transl_table=11 DAFVNP010000008.1 tpg gene 15988 17781 . + . ID=gene-L8R42_000740;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=L8R42_000740 DAFVNP010000008.1 Protein Homology CDS 15988 17781 . + 0 ID=cds-HBQ7388864.1;Parent=gene-L8R42_000740;Dbxref=NCBI_GP:HBQ7388864.1;Name=HBQ7388864.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=L8R42_000740;product=Ni/Fe-hydrogenase large subunit;protein_id=HBQ7388864.1;transl_table=11 DAFVNP010000008.1 tpg gene 17800 18531 . + . ID=gene-L8R42_000741;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=L8R42_000741 DAFVNP010000008.1 Protein Homology CDS 17800 18531 . + 0 ID=cds-HBQ7388865.1;Parent=gene-L8R42_000741;Dbxref=NCBI_GP:HBQ7388865.1;Name=HBQ7388865.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=L8R42_000741;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=HBQ7388865.1;transl_table=11 DAFVNP010000008.1 tpg gene 18528 19124 . + . ID=gene-L8R42_000742;Name=L8R42_000742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000742 DAFVNP010000008.1 Protein Homology CDS 18528 19124 . + 0 ID=cds-HBQ7388866.1;Parent=gene-L8R42_000742;Dbxref=NCBI_GP:HBQ7388866.1;Name=HBQ7388866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=L8R42_000742;product=hydrogenase 1 maturation protease;protein_id=HBQ7388866.1;transl_table=11 DAFVNP010000008.1 tpg gene 19114 19518 . + . ID=gene-L8R42_000743;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=L8R42_000743 DAFVNP010000008.1 Protein Homology CDS 19114 19518 . + 0 ID=cds-HBQ7388867.1;Parent=gene-L8R42_000743;Dbxref=NCBI_GP:HBQ7388867.1;Name=HBQ7388867.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=L8R42_000743;product=hydrogenase-1 operon protein HyaE;protein_id=HBQ7388867.1;transl_table=11 DAFVNP010000008.1 tpg gene 19515 20363 . + . ID=gene-L8R42_000744;Name=L8R42_000744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000744 DAFVNP010000008.1 Protein Homology CDS 19515 20363 . + 0 ID=cds-HBQ7388868.1;Parent=gene-L8R42_000744;Dbxref=NCBI_GP:HBQ7388868.1;Name=HBQ7388868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=L8R42_000744;product=hydrogenase expression/formation protein;protein_id=HBQ7388868.1;transl_table=11 DAFVNP010000008.1 tpg gene 20438 21982 . + . ID=gene-L8R42_000745;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=L8R42_000745 DAFVNP010000008.1 Protein Homology CDS 20438 21982 . + 0 ID=cds-HBQ7388869.1;Parent=gene-L8R42_000745;Dbxref=NCBI_GP:HBQ7388869.1;Name=HBQ7388869.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=L8R42_000745;product=cytochrome bd-II oxidase subunit 1;protein_id=HBQ7388869.1;transl_table=11 DAFVNP010000008.1 tpg gene 21994 23130 . + . ID=gene-L8R42_000746;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=L8R42_000746 DAFVNP010000008.1 Protein Homology CDS 21994 23130 . + 0 ID=cds-HBQ7388870.1;Parent=gene-L8R42_000746;Dbxref=NCBI_GP:HBQ7388870.1;Name=HBQ7388870.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=L8R42_000746;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HBQ7388870.1;transl_table=11 DAFVNP010000008.1 tpg gene 23143 23232 . + . ID=gene-L8R42_000747;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=L8R42_000747 DAFVNP010000008.1 Protein Homology CDS 23143 23232 . + 0 ID=cds-HBQ7388871.1;Parent=gene-L8R42_000747;Dbxref=NCBI_GP:HBQ7388871.1;Name=HBQ7388871.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=L8R42_000747;product=cytochrome bd-II oxidase subunit CbdX;protein_id=HBQ7388871.1;transl_table=11 DAFVNP010000008.1 tpg gene 23627 24901 . + . ID=gene-L8R42_000748;Name=L8R42_000748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000748 DAFVNP010000008.1 Protein Homology CDS 23627 24901 . + 0 ID=cds-HBQ7388872.1;Parent=gene-L8R42_000748;Dbxref=NCBI_GP:HBQ7388872.1;Name=HBQ7388872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=L8R42_000748;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=HBQ7388872.1;transl_table=11 DAFVNP010000008.1 tpg gene 25115 26827 . + . ID=gene-L8R42_000749;Name=L8R42_000749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000749 DAFVNP010000008.1 Protein Homology CDS 25115 26827 . + 0 ID=cds-HBQ7388873.1;Parent=gene-L8R42_000749;Dbxref=NCBI_GP:HBQ7388873.1;Name=HBQ7388873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=L8R42_000749;product=alpha%2Calpha-trehalase;protein_id=HBQ7388873.1;transl_table=11 DAFVNP010000008.1 tpg gene 26890 27144 . - . ID=gene-L8R42_000750;Name=L8R42_000750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000750 DAFVNP010000008.1 Protein Homology CDS 26890 27144 . - 0 ID=cds-HBQ7388874.1;Parent=gene-L8R42_000750;Dbxref=NCBI_GP:HBQ7388874.1;Name=HBQ7388874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=L8R42_000750;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=HBQ7388874.1;transl_table=11 DAFVNP010000008.1 tpg gene 27313 28047 . + . ID=gene-L8R42_000751;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=L8R42_000751 DAFVNP010000008.1 Protein Homology CDS 27313 28047 . + 0 ID=cds-HBQ7388875.1;Parent=gene-L8R42_000751;Dbxref=NCBI_GP:HBQ7388875.1;Name=HBQ7388875.1;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=L8R42_000751;product=flagellar brake protein YcgR;protein_id=HBQ7388875.1;transl_table=11 DAFVNP010000008.1 tpg gene 28061 28672 . - . ID=gene-L8R42_000752;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=L8R42_000752 DAFVNP010000008.1 Protein Homology CDS 28061 28672 . - 0 ID=cds-HBQ7388876.1;Parent=gene-L8R42_000752;Dbxref=NCBI_GP:HBQ7388876.1;Name=HBQ7388876.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=L8R42_000752;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=HBQ7388876.1;transl_table=11 DAFVNP010000008.1 tpg gene 28843 29757 . + . ID=gene-L8R42_000753;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=L8R42_000753 DAFVNP010000008.1 Protein Homology CDS 28843 29757 . + 0 ID=cds-HBQ7388877.1;Parent=gene-L8R42_000753;Dbxref=NCBI_GP:HBQ7388877.1;Name=HBQ7388877.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=L8R42_000753;product=muramoyltetrapeptide carboxypeptidase;protein_id=HBQ7388877.1;transl_table=11 DAFVNP010000008.1 tpg gene 29854 31587 . + . ID=gene-L8R42_000754;Name=L8R42_000754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000754 DAFVNP010000008.1 Protein Homology CDS 29854 31587 . + 0 ID=cds-HBQ7388878.1;Parent=gene-L8R42_000754;Dbxref=NCBI_GP:HBQ7388878.1;Name=HBQ7388878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=L8R42_000754;product=potassium/proton antiporter;protein_id=HBQ7388878.1;transl_table=11 DAFVNP010000008.1 tpg gene 31649 32719 . - . ID=gene-L8R42_000755;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=L8R42_000755 DAFVNP010000008.1 Protein Homology CDS 31649 32719 . - 0 ID=cds-HBQ7388879.1;Parent=gene-L8R42_000755;Dbxref=NCBI_GP:HBQ7388879.1;Name=HBQ7388879.1;gbkey=CDS;gene=dadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=L8R42_000755;product=catabolic alanine racemase DadX;protein_id=HBQ7388879.1;transl_table=11 DAFVNP010000008.1 tpg gene 32733 34031 . - . ID=gene-L8R42_000756;Name=L8R42_000756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000756 DAFVNP010000008.1 Protein Homology CDS 32733 34031 . - 0 ID=cds-HBQ7388880.1;Parent=gene-L8R42_000756;Dbxref=NCBI_GP:HBQ7388880.1;Name=HBQ7388880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=L8R42_000756;product=D-amino acid dehydrogenase;protein_id=HBQ7388880.1;transl_table=11 DAFVNP010000008.1 tpg gene 34354 35886 . + . ID=gene-L8R42_000757;Name=L8R42_000757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000757 DAFVNP010000008.1 Protein Homology CDS 34354 35886 . + 0 ID=cds-HBQ7388881.1;Parent=gene-L8R42_000757;Dbxref=NCBI_GP:HBQ7388881.1;Name=HBQ7388881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=L8R42_000757;product=SpoVR family protein;protein_id=HBQ7388881.1;transl_table=11 DAFVNP010000008.1 tpg gene 35933 36652 . - . ID=gene-L8R42_000758;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=L8R42_000758 DAFVNP010000008.1 Protein Homology CDS 35933 36652 . - 0 ID=cds-HBQ7388882.1;Parent=gene-L8R42_000758;Dbxref=NCBI_GP:HBQ7388882.1;Name=HBQ7388882.1;gbkey=CDS;gene=fadR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=L8R42_000758;product=fatty acid metabolism transcriptional regulator FadR;protein_id=HBQ7388882.1;transl_table=11 DAFVNP010000008.1 tpg gene 36872 38416 . + . ID=gene-L8R42_000759;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=L8R42_000759 DAFVNP010000008.1 Protein Homology CDS 36872 38416 . + 0 ID=cds-HBQ7388883.1;Parent=gene-L8R42_000759;Dbxref=NCBI_GP:HBQ7388883.1;Name=HBQ7388883.1;gbkey=CDS;gene=nhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=L8R42_000759;product=Na(+)/H(+) antiporter NhaB;protein_id=HBQ7388883.1;transl_table=11 DAFVNP010000008.1 tpg gene 38558 39088 . + . ID=gene-L8R42_000760;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=L8R42_000760 DAFVNP010000008.1 Protein Homology CDS 38558 39088 . + 0 ID=cds-HBQ7388884.1;Parent=gene-L8R42_000760;Dbxref=NCBI_GP:HBQ7388884.1;Name=HBQ7388884.1;gbkey=CDS;gene=dsbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=L8R42_000760;product=disulfide bond formation protein DsbB;protein_id=HBQ7388884.1;transl_table=11 DAFVNP010000008.1 tpg gene 39197 39538 . + . ID=gene-L8R42_000761;Name=L8R42_000761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000761 DAFVNP010000008.1 Protein Homology CDS 39197 39538 . + 0 ID=cds-HBQ7388885.1;Parent=gene-L8R42_000761;Dbxref=NCBI_GP:HBQ7388885.1;Name=HBQ7388885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=L8R42_000761;product=DUF1971 domain-containing protein;protein_id=HBQ7388885.1;transl_table=11 DAFVNP010000008.1 tpg gene 39609 39782 . - . ID=gene-L8R42_000762;Name=L8R42_000762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000762 DAFVNP010000008.1 Protein Homology CDS 39609 39782 . - 0 ID=cds-HBQ7388886.1;Parent=gene-L8R42_000762;Dbxref=NCBI_GP:HBQ7388886.1;Name=HBQ7388886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=L8R42_000762;product=addiction module toxin%2C GnsA/GnsB family;protein_id=HBQ7388886.1;transl_table=11 DAFVNP010000008.1 tpg gene 39974 40111 . - . ID=gene-L8R42_000763;Name=L8R42_000763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000763 DAFVNP010000008.1 Protein Homology CDS 39974 40111 . - 0 ID=cds-HBQ7388887.1;Parent=gene-L8R42_000763;Dbxref=NCBI_GP:HBQ7388887.1;Name=HBQ7388887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=L8R42_000763;product=hypothetical protein;protein_id=HBQ7388887.1;transl_table=11 DAFVNP010000008.1 tpg gene 40463 40909 . - . ID=gene-L8R42_000764;Name=L8R42_000764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000764 DAFVNP010000008.1 Protein Homology CDS 40463 40909 . - 0 ID=cds-HBQ7388888.1;Parent=gene-L8R42_000764;Dbxref=NCBI_GP:HBQ7388888.1;Name=HBQ7388888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=L8R42_000764;product=YcgN family cysteine cluster protein;protein_id=HBQ7388888.1;transl_table=11 DAFVNP010000008.1 tpg gene 41002 41661 . - . ID=gene-L8R42_000765;Name=L8R42_000765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000765 DAFVNP010000008.1 Protein Homology CDS 41002 41661 . - 0 ID=cds-HBQ7388889.1;Parent=gene-L8R42_000765;Dbxref=NCBI_GP:HBQ7388889.1;Name=HBQ7388889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=L8R42_000765;product=fumarylacetoacetate hydrolase family protein;protein_id=HBQ7388889.1;transl_table=11 DAFVNP010000008.1 tpg gene 41711 42004 . - . ID=gene-L8R42_000766;Name=L8R42_000766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000766 DAFVNP010000008.1 Protein Homology CDS 41711 42004 . - 0 ID=cds-HBQ7388890.1;Parent=gene-L8R42_000766;Dbxref=NCBI_GP:HBQ7388890.1;Name=HBQ7388890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667868.1;locus_tag=L8R42_000766;product=YcgL domain-containing protein;protein_id=HBQ7388890.1;transl_table=11 DAFVNP010000008.1 tpg gene 42130 42837 . + . ID=gene-L8R42_000767;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=L8R42_000767 DAFVNP010000008.1 Protein Homology CDS 42130 42837 . + 0 ID=cds-HBQ7388891.1;Parent=gene-L8R42_000767;Dbxref=NCBI_GP:HBQ7388891.1;Name=HBQ7388891.1;gbkey=CDS;gene=minC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=L8R42_000767;product=septum site-determining protein MinC;protein_id=HBQ7388891.1;transl_table=11 DAFVNP010000008.1 tpg gene 42861 43673 . + . ID=gene-L8R42_000768;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=L8R42_000768 DAFVNP010000008.1 Protein Homology CDS 42861 43673 . + 0 ID=cds-HBQ7388892.1;Parent=gene-L8R42_000768;Dbxref=NCBI_GP:HBQ7388892.1;Name=HBQ7388892.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=L8R42_000768;product=septum site-determining protein MinD;protein_id=HBQ7388892.1;transl_table=11 DAFVNP010000008.1 tpg gene 43677 43943 . + . ID=gene-L8R42_000769;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=L8R42_000769 DAFVNP010000008.1 Protein Homology CDS 43677 43943 . + 0 ID=cds-HBQ7388893.1;Parent=gene-L8R42_000769;Dbxref=NCBI_GP:HBQ7388893.1;Name=HBQ7388893.1;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=L8R42_000769;product=cell division topological specificity factor MinE;protein_id=HBQ7388893.1;transl_table=11 DAFVNP010000008.1 tpg gene 44065 45192 . - . ID=gene-L8R42_000770;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=L8R42_000770 DAFVNP010000008.1 Protein Homology CDS 44065 45192 . - 0 ID=cds-HBQ7388894.1;Parent=gene-L8R42_000770;Dbxref=NCBI_GP:HBQ7388894.1;Name=HBQ7388894.1;gbkey=CDS;gene=rnd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=L8R42_000770;product=ribonuclease D;protein_id=HBQ7388894.1;transl_table=11 DAFVNP010000008.1 tpg gene 45265 46950 . - . ID=gene-L8R42_000771;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=L8R42_000771 DAFVNP010000008.1 Protein Homology CDS 45265 46950 . - 0 ID=cds-HBQ7388895.1;Parent=gene-L8R42_000771;Dbxref=NCBI_GP:HBQ7388895.1;Name=HBQ7388895.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=L8R42_000771;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=HBQ7388895.1;transl_table=11 DAFVNP010000008.1 tpg gene 47155 47736 . - . ID=gene-L8R42_000772;Name=L8R42_000772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000772 DAFVNP010000008.1 Protein Homology CDS 47155 47736 . - 0 ID=cds-HBQ7388896.1;Parent=gene-L8R42_000772;Dbxref=NCBI_GP:HBQ7388896.1;Name=HBQ7388896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=L8R42_000772;product=Slp family lipoprotein;protein_id=HBQ7388896.1;transl_table=11 DAFVNP010000008.1 tpg gene 47808 48503 . - . ID=gene-L8R42_000773;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=L8R42_000773 DAFVNP010000008.1 Protein Homology CDS 47808 48503 . - 0 ID=cds-HBQ7388897.1;Parent=gene-L8R42_000773;Dbxref=NCBI_GP:HBQ7388897.1;Name=HBQ7388897.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=L8R42_000773;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=HBQ7388897.1;transl_table=11 DAFVNP010000008.1 tpg gene 48561 50471 . - . ID=gene-L8R42_000774;Name=L8R42_000774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000774 DAFVNP010000008.1 Protein Homology CDS 48561 50471 . - 0 ID=cds-HBQ7388898.1;Parent=gene-L8R42_000774;Dbxref=NCBI_GP:HBQ7388898.1;Name=HBQ7388898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=L8R42_000774;product=ATP-dependent DNA helicase;protein_id=HBQ7388898.1;transl_table=11 DAFVNP010000008.1 tpg gene 50602 50946 . + . ID=gene-L8R42_000775;Name=L8R42_000775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000775 DAFVNP010000008.1 Protein Homology CDS 50602 50946 . + 0 ID=cds-HBQ7388899.1;Parent=gene-L8R42_000775;Dbxref=NCBI_GP:HBQ7388899.1;Name=HBQ7388899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=L8R42_000775;product=RidA family protein;protein_id=HBQ7388899.1;transl_table=11 DAFVNP010000008.1 tpg gene 50952 51131 . - . ID=gene-L8R42_000776;Name=L8R42_000776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000776 DAFVNP010000008.1 Protein Homology CDS 50952 51131 . - 0 ID=cds-HBQ7388900.1;Parent=gene-L8R42_000776;Dbxref=NCBI_GP:HBQ7388900.1;Name=HBQ7388900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=L8R42_000776;product=YoaH family protein;protein_id=HBQ7388900.1;transl_table=11 DAFVNP010000008.1 tpg gene 51212 52576 . + . ID=gene-L8R42_000777;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=L8R42_000777 DAFVNP010000008.1 Protein Homology CDS 51212 52576 . + 0 ID=cds-HBQ7388901.1;Parent=gene-L8R42_000777;Dbxref=NCBI_GP:HBQ7388901.1;Name=HBQ7388901.1;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=L8R42_000777;product=aminodeoxychorismate synthase component 1;protein_id=HBQ7388901.1;transl_table=11 DAFVNP010000008.1 tpg gene 52580 53158 . + . ID=gene-L8R42_000778;Name=L8R42_000778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000778 DAFVNP010000008.1 Protein Homology CDS 52580 53158 . + 0 ID=cds-HBQ7388902.1;Parent=gene-L8R42_000778;Dbxref=NCBI_GP:HBQ7388902.1;Name=HBQ7388902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=L8R42_000778;product=CoA pyrophosphatase;protein_id=HBQ7388902.1;transl_table=11 DAFVNP010000008.1 tpg gene 53422 54786 . + . ID=gene-L8R42_000779;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=L8R42_000779 DAFVNP010000008.1 Protein Homology CDS 53422 54786 . + 0 ID=cds-HBQ7388903.1;Parent=gene-L8R42_000779;Dbxref=NCBI_GP:HBQ7388903.1;Name=HBQ7388903.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=L8R42_000779;product=L-serine ammonia-lyase;protein_id=HBQ7388903.1;transl_table=11 DAFVNP010000008.1 tpg gene 54924 56525 . + . ID=gene-L8R42_000780;Name=L8R42_000780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000780 DAFVNP010000008.1 Protein Homology CDS 54924 56525 . + 0 ID=cds-HBQ7388904.1;Parent=gene-L8R42_000780;Dbxref=NCBI_GP:HBQ7388904.1;Name=HBQ7388904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=L8R42_000780;product=EAL domain-containing protein;protein_id=HBQ7388904.1;transl_table=11 DAFVNP010000008.1 tpg gene 56547 58106 . - . ID=gene-L8R42_000781;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=L8R42_000781 DAFVNP010000008.1 Protein Homology CDS 56547 58106 . - 0 ID=cds-HBQ7388905.1;Parent=gene-L8R42_000781;Dbxref=NCBI_GP:HBQ7388905.1;Name=HBQ7388905.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=L8R42_000781;product=CNNM family cation transport protein YoaE;protein_id=HBQ7388905.1;transl_table=11 DAFVNP010000008.1 tpg gene 58579 59547 . + . ID=gene-L8R42_000782;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=L8R42_000782 DAFVNP010000008.1 Protein Homology CDS 58579 59547 . + 0 ID=cds-HBQ7388906.1;Parent=gene-L8R42_000782;Dbxref=NCBI_GP:HBQ7388906.1;Name=HBQ7388906.1;gbkey=CDS;gene=manX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=L8R42_000782;product=PTS mannose transporter subunit IIAB;protein_id=HBQ7388906.1;transl_table=11 DAFVNP010000008.1 tpg gene 59600 60400 . + . ID=gene-L8R42_000783;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=L8R42_000783 DAFVNP010000008.1 Protein Homology CDS 59600 60400 . + 0 ID=cds-HBQ7388907.1;Parent=gene-L8R42_000783;Dbxref=NCBI_GP:HBQ7388907.1;Name=HBQ7388907.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=L8R42_000783;product=PTS mannose transporter subunit IIC;protein_id=HBQ7388907.1;transl_table=11 DAFVNP010000008.1 tpg gene 60413 61264 . + . ID=gene-L8R42_000784;Name=L8R42_000784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000784 DAFVNP010000008.1 Protein Homology CDS 60413 61264 . + 0 ID=cds-HBQ7388908.1;Parent=gene-L8R42_000784;Dbxref=NCBI_GP:HBQ7388908.1;Name=HBQ7388908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=L8R42_000784;product=PTS mannose transporter subunit IID;protein_id=HBQ7388908.1;transl_table=11 DAFVNP010000008.1 tpg gene 61323 61781 . + . ID=gene-L8R42_000785;Name=L8R42_000785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000785 DAFVNP010000008.1 Protein Homology CDS 61323 61781 . + 0 ID=cds-HBQ7388909.1;Parent=gene-L8R42_000785;Dbxref=NCBI_GP:HBQ7388909.1;Name=HBQ7388909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460789.1;locus_tag=L8R42_000785;product=DUF986 domain-containing protein;protein_id=HBQ7388909.1;transl_table=11 DAFVNP010000008.1 tpg gene 62191 62757 . + . ID=gene-L8R42_000786;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=L8R42_000786 DAFVNP010000008.1 Protein Homology CDS 62191 62757 . + 0 ID=cds-HBQ7388910.1;Parent=gene-L8R42_000786;Dbxref=NCBI_GP:HBQ7388910.1;Name=HBQ7388910.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=L8R42_000786;product=manganese efflux pump MntP;protein_id=HBQ7388910.1;transl_table=11 DAFVNP010000008.1 tpg gene 62754 63563 . - . ID=gene-L8R42_000787;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=L8R42_000787 DAFVNP010000008.1 Protein Homology CDS 62754 63563 . - 0 ID=cds-HBQ7388911.1;Parent=gene-L8R42_000787;Dbxref=NCBI_GP:HBQ7388911.1;Name=HBQ7388911.1;gbkey=CDS;gene=rlmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=L8R42_000787;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=HBQ7388911.1;transl_table=11 DAFVNP010000008.1 tpg gene 63629 65374 . - . ID=gene-L8R42_000788;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=L8R42_000788 DAFVNP010000008.1 Protein Homology CDS 63629 65374 . - 0 ID=cds-HBQ7388912.1;Parent=gene-L8R42_000788;Dbxref=NCBI_GP:HBQ7388912.1;Name=HBQ7388912.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=L8R42_000788;product=peptidoglycan glycosyltransferase FtsI;protein_id=HBQ7388912.1;transl_table=11 DAFVNP010000008.1 tpg gene 65594 65803 . - . ID=gene-L8R42_000789;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=L8R42_000789 DAFVNP010000008.1 Protein Homology CDS 65594 65803 . - 0 ID=cds-HBQ7388913.1;Parent=gene-L8R42_000789;Dbxref=NCBI_GP:HBQ7388913.1;Name=HBQ7388913.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=L8R42_000789;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HBQ7388913.1;transl_table=11 DAFVNP010000008.1 tpg gene 65816 65959 . - . ID=gene-L8R42_000790;Name=L8R42_000790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000790 DAFVNP010000008.1 Protein Homology CDS 65816 65959 . - 0 ID=cds-HBQ7388914.1;Parent=gene-L8R42_000790;Dbxref=NCBI_GP:HBQ7388914.1;Name=HBQ7388914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=L8R42_000790;product=YobF family protein;protein_id=HBQ7388914.1;transl_table=11 DAFVNP010000008.1 tpg gene 66608 66895 . - . ID=gene-L8R42_000791;Name=L8R42_000791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000791 DAFVNP010000008.1 Protein Homology CDS 66608 66895 . - 0 ID=cds-HBQ7388915.1;Parent=gene-L8R42_000791;Dbxref=NCBI_GP:HBQ7388915.1;Name=HBQ7388915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=L8R42_000791;product=YebO family protein;protein_id=HBQ7388915.1;transl_table=11 DAFVNP010000008.1 tpg gene 66966 67109 . - . ID=gene-L8R42_000792;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=L8R42_000792 DAFVNP010000008.1 Protein Homology CDS 66966 67109 . - 0 ID=cds-HBQ7388916.1;Parent=gene-L8R42_000792;Dbxref=NCBI_GP:HBQ7388916.1;Name=HBQ7388916.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=L8R42_000792;product=PhoP/PhoQ regulator MgrB;protein_id=HBQ7388916.1;transl_table=11 DAFVNP010000008.1 tpg gene 67267 67506 . + . ID=gene-L8R42_000793;Name=L8R42_000793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000793 DAFVNP010000008.1 Protein Homology CDS 67267 67506 . + 0 ID=cds-HBQ7388917.1;Parent=gene-L8R42_000793;Dbxref=NCBI_GP:HBQ7388917.1;Name=HBQ7388917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=L8R42_000793;product=hypothetical protein;protein_id=HBQ7388917.1;transl_table=11 DAFVNP010000008.1 tpg gene 67718 68509 . - . ID=gene-L8R42_000794;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=L8R42_000794 DAFVNP010000008.1 Protein Homology CDS 67718 68509 . - 0 ID=cds-HBQ7388918.1;Parent=gene-L8R42_000794;Dbxref=NCBI_GP:HBQ7388918.1;Name=HBQ7388918.1;gbkey=CDS;gene=kdgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=L8R42_000794;product=DNA-binding transcriptional regulator KdgR;protein_id=HBQ7388918.1;transl_table=11 DAFVNP010000008.1 tpg gene 68685 70058 . + . ID=gene-L8R42_000795;Name=L8R42_000795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000795 DAFVNP010000008.1 Protein Homology CDS 68685 70058 . + 0 ID=cds-HBQ7388919.1;Parent=gene-L8R42_000795;Dbxref=NCBI_GP:HBQ7388919.1;Name=HBQ7388919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=L8R42_000795;product=MFS transporter;protein_id=HBQ7388919.1;transl_table=11 DAFVNP010000008.1 tpg gene 70106 70987 . - . ID=gene-L8R42_000796;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=L8R42_000796 DAFVNP010000008.1 Protein Homology CDS 70106 70987 . - 0 ID=cds-HBQ7388920.1;Parent=gene-L8R42_000796;Dbxref=NCBI_GP:HBQ7388920.1;Name=HBQ7388920.1;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=L8R42_000796;product=protease HtpX;protein_id=HBQ7388920.1;transl_table=11 DAFVNP010000008.1 tpg gene 71181 73229 . - . ID=gene-L8R42_000797;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=L8R42_000797 DAFVNP010000008.1 Protein Homology CDS 71181 73229 . - 0 ID=cds-HBQ7388921.1;Parent=gene-L8R42_000797;Dbxref=NCBI_GP:HBQ7388921.1;Name=HBQ7388921.1;gbkey=CDS;gene=prc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=L8R42_000797;product=carboxy terminal-processing peptidase;protein_id=HBQ7388921.1;transl_table=11 DAFVNP010000008.1 tpg gene 73249 73935 . - . ID=gene-L8R42_000798;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=L8R42_000798 DAFVNP010000008.1 Protein Homology CDS 73249 73935 . - 0 ID=cds-HBQ7388922.1;Parent=gene-L8R42_000798;Dbxref=NCBI_GP:HBQ7388922.1;Name=HBQ7388922.1;gbkey=CDS;gene=proQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=L8R42_000798;product=RNA chaperone ProQ;protein_id=HBQ7388922.1;transl_table=11 DAFVNP010000008.1 tpg gene 74033 74530 . - . ID=gene-L8R42_000799;Name=L8R42_000799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000799 DAFVNP010000008.1 Protein Homology CDS 74033 74530 . - 0 ID=cds-HBQ7388923.1;Parent=gene-L8R42_000799;Dbxref=NCBI_GP:HBQ7388923.1;Name=HBQ7388923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=L8R42_000799;product=GAF domain-containing protein;protein_id=HBQ7388923.1;transl_table=11 DAFVNP010000008.1 tpg gene 74659 75942 . + . ID=gene-L8R42_000800;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=L8R42_000800 DAFVNP010000008.1 Protein Homology CDS 74659 75942 . + 0 ID=cds-HBQ7388924.1;Parent=gene-L8R42_000800;Dbxref=NCBI_GP:HBQ7388924.1;Name=HBQ7388924.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=L8R42_000800;product=membrane integrity lipid transport subunit YebS;protein_id=HBQ7388924.1;transl_table=11 DAFVNP010000008.1 tpg gene 75911 78544 . + . ID=gene-L8R42_000801;Name=L8R42_000801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000801 DAFVNP010000008.1 Protein Homology CDS 75911 78544 . + 0 ID=cds-HBQ7388925.1;Parent=gene-L8R42_000801;Dbxref=NCBI_GP:HBQ7388925.1;Name=HBQ7388925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=L8R42_000801;product=MCE family protein;protein_id=HBQ7388925.1;transl_table=11 DAFVNP010000008.1 tpg gene 78622 80061 . + . ID=gene-L8R42_000802;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=L8R42_000802 DAFVNP010000008.1 Protein Homology CDS 78622 80061 . + 0 ID=cds-HBQ7388926.1;Parent=gene-L8R42_000802;Dbxref=NCBI_GP:HBQ7388926.1;Name=HBQ7388926.1;gbkey=CDS;gene=rsmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=L8R42_000802;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=HBQ7388926.1;transl_table=11 DAFVNP010000008.1 tpg gene 80179 80415 . + . ID=gene-L8R42_000803;Name=L8R42_000803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000803 DAFVNP010000008.1 Protein Homology CDS 80179 80415 . + 0 ID=cds-HBQ7388927.1;Parent=gene-L8R42_000803;Dbxref=NCBI_GP:HBQ7388927.1;Name=HBQ7388927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=L8R42_000803;product=DUF1480 family protein;protein_id=HBQ7388927.1;transl_table=11 DAFVNP010000008.1 tpg gene 80526 80717 . + . ID=gene-L8R42_000804;Name=L8R42_000804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000804 DAFVNP010000008.1 Protein Homology CDS 80526 80717 . + 0 ID=cds-HBQ7388928.1;Parent=gene-L8R42_000804;Dbxref=NCBI_GP:HBQ7388928.1;Name=HBQ7388928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=L8R42_000804;product=YebW family protein;protein_id=HBQ7388928.1;transl_table=11 DAFVNP010000008.1 tpg gene 80736 81386 . - . ID=gene-L8R42_000805;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=L8R42_000805 DAFVNP010000008.1 Protein Homology CDS 80736 81386 . - 0 ID=cds-HBQ7388929.1;Parent=gene-L8R42_000805;Dbxref=NCBI_GP:HBQ7388929.1;Name=HBQ7388929.1;gbkey=CDS;gene=pphA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=L8R42_000805;product=protein-serine/threonine phosphatase;protein_id=HBQ7388929.1;transl_table=11 DAFVNP010000008.1 tpg gene 81610 81774 . - . ID=gene-L8R42_000806;Name=L8R42_000806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000806 DAFVNP010000008.1 Protein Homology CDS 81610 81774 . - 0 ID=cds-HBQ7388930.1;Parent=gene-L8R42_000806;Dbxref=NCBI_GP:HBQ7388930.1;Name=HBQ7388930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=L8R42_000806;product=hypothetical protein;protein_id=HBQ7388930.1;transl_table=11 DAFVNP010000008.1 tpg gene 82059 82781 . - . ID=gene-L8R42_000807;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=L8R42_000807 DAFVNP010000008.1 Protein Homology CDS 82059 82781 . - 0 ID=cds-HBQ7388931.1;Parent=gene-L8R42_000807;Dbxref=NCBI_GP:HBQ7388931.1;Name=HBQ7388931.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=L8R42_000807;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=HBQ7388931.1;transl_table=11 ##sequence-region DAFVNP010000009.1 1 81437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000009.1 tpg region 1 81437 . + . ID=DAFVNP010000009.1:1..81437;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000009.1 tpg gene 215 919 . - . ID=gene-L8R42_000808;Name=L8R42_000808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000808 DAFVNP010000009.1 Protein Homology CDS 215 919 . - 0 ID=cds-HBQ7388932.1;Parent=gene-L8R42_000808;Dbxref=NCBI_GP:HBQ7388932.1;Name=HBQ7388932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=L8R42_000808;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HBQ7388932.1;transl_table=11 DAFVNP010000009.1 tpg gene 1076 1657 . + . ID=gene-L8R42_000809;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=L8R42_000809 DAFVNP010000009.1 Protein Homology CDS 1076 1657 . + 0 ID=cds-HBQ7388933.1;Parent=gene-L8R42_000809;Dbxref=NCBI_GP:HBQ7388933.1;Name=HBQ7388933.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=L8R42_000809;product=DNA-3-methyladenine glycosylase I;protein_id=HBQ7388933.1;transl_table=11 DAFVNP010000009.1 tpg gene 1635 2075 . + . ID=gene-L8R42_000810;Name=L8R42_000810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000810 DAFVNP010000009.1 Protein Homology CDS 1635 2075 . + 0 ID=cds-HBQ7388934.1;Parent=gene-L8R42_000810;Dbxref=NCBI_GP:HBQ7388934.1;Name=HBQ7388934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=L8R42_000810;product=N-acetyltransferase;protein_id=HBQ7388934.1;transl_table=11 DAFVNP010000009.1 tpg gene 2044 4377 . - . ID=gene-L8R42_000811;Name=L8R42_000811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000811 DAFVNP010000009.1 Protein Homology CDS 2044 4377 . - 0 ID=cds-HBQ7388935.1;Parent=gene-L8R42_000811;Dbxref=NCBI_GP:HBQ7388935.1;Name=HBQ7388935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=L8R42_000811;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=HBQ7388935.1;transl_table=11 DAFVNP010000009.1 tpg gene 4530 5192 . + . ID=gene-L8R42_000812;Name=L8R42_000812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000812 DAFVNP010000009.1 Protein Homology CDS 4530 5192 . + 0 ID=cds-HBQ7388936.1;Parent=gene-L8R42_000812;Dbxref=NCBI_GP:HBQ7388936.1;Name=HBQ7388936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=L8R42_000812;product=OmpA family lipoprotein;protein_id=HBQ7388936.1;transl_table=11 DAFVNP010000009.1 tpg gene 5411 6385 . + . ID=gene-L8R42_000813;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=L8R42_000813 DAFVNP010000009.1 Protein Homology CDS 5411 6385 . + 0 ID=cds-HBQ7388937.1;Parent=gene-L8R42_000813;Dbxref=NCBI_GP:HBQ7388937.1;Name=HBQ7388937.1;gbkey=CDS;gene=ghrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=L8R42_000813;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=HBQ7388937.1;transl_table=11 DAFVNP010000009.1 tpg gene 6435 7145 . - . ID=gene-L8R42_000814;Name=L8R42_000814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000814 DAFVNP010000009.1 Protein Homology CDS 6435 7145 . - 0 ID=cds-HBQ7388938.1;Parent=gene-L8R42_000814;Dbxref=NCBI_GP:HBQ7388938.1;Name=HBQ7388938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=L8R42_000814;product=DUF3053 domain-containing protein;protein_id=HBQ7388938.1;transl_table=11 DAFVNP010000009.1 tpg gene 7584 7874 . + . ID=gene-L8R42_000815;Name=L8R42_000815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000815 DAFVNP010000009.1 Protein Homology CDS 7584 7874 . + 0 ID=cds-HBQ7388939.1;Parent=gene-L8R42_000815;Dbxref=NCBI_GP:HBQ7388939.1;Name=HBQ7388939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=L8R42_000815;product=HTH-type transcriptional regulator;protein_id=HBQ7388939.1;transl_table=11 DAFVNP010000009.1 tpg gene 8162 8374 . + . ID=gene-L8R42_000816;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=L8R42_000816 DAFVNP010000009.1 Protein Homology CDS 8162 8374 . + 0 ID=cds-HBQ7388940.1;Parent=gene-L8R42_000816;Dbxref=NCBI_GP:HBQ7388940.1;Name=HBQ7388940.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=L8R42_000816;product=RNA chaperone/antiterminator CspA;protein_id=HBQ7388940.1;transl_table=11 DAFVNP010000009.1 tpg gene 8547 9086 . + . ID=gene-L8R42_000817;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=L8R42_000817 DAFVNP010000009.1 Protein Homology CDS 8547 9086 . + 0 ID=cds-HBQ7388941.1;Parent=gene-L8R42_000817;Dbxref=NCBI_GP:HBQ7388941.1;Name=HBQ7388941.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=L8R42_000817;product=copper-binding periplasmic metallochaperone CueP;protein_id=HBQ7388941.1;transl_table=11 DAFVNP010000009.1 tpg gene 9456 9941 . - . ID=gene-L8R42_000818;Name=L8R42_000818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000818 DAFVNP010000009.1 Protein Homology CDS 9456 9941 . - 0 ID=cds-HBQ7388942.1;Parent=gene-L8R42_000818;Dbxref=NCBI_GP:HBQ7388942.1;Name=HBQ7388942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=L8R42_000818;product=GNAT family N-acetyltransferase;protein_id=HBQ7388942.1;transl_table=11 DAFVNP010000009.1 tpg gene 9929 10216 . - . ID=gene-L8R42_000819;Name=L8R42_000819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000819 DAFVNP010000009.1 Protein Homology CDS 9929 10216 . - 0 ID=cds-HBQ7388943.1;Parent=gene-L8R42_000819;Dbxref=NCBI_GP:HBQ7388943.1;Name=HBQ7388943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=L8R42_000819;product=DUF1778 domain-containing protein;protein_id=HBQ7388943.1;transl_table=11 DAFVNP010000009.1 tpg gene 10339 10845 . - . ID=gene-L8R42_000820;Name=L8R42_000820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000820 DAFVNP010000009.1 Protein Homology CDS 10339 10845 . - 0 ID=cds-HBQ7388944.1;Parent=gene-L8R42_000820;Dbxref=NCBI_GP:HBQ7388944.1;Name=HBQ7388944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001654323.1;locus_tag=L8R42_000820;product=HNH endonuclease;protein_id=HBQ7388944.1;transl_table=11 DAFVNP010000009.1 tpg gene 12394 13164 . + . ID=gene-L8R42_000821;Name=L8R42_000821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000821 DAFVNP010000009.1 Protein Homology CDS 12394 13164 . + 0 ID=cds-HBQ7388945.1;Parent=gene-L8R42_000821;Dbxref=NCBI_GP:HBQ7388945.1;Name=HBQ7388945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547062.1;locus_tag=L8R42_000821;product=DUF3800 domain-containing protein;protein_id=HBQ7388945.1;transl_table=11 DAFVNP010000009.1 tpg gene 13360 13902 . - . ID=gene-L8R42_000822;Name=L8R42_000822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000822 DAFVNP010000009.1 Protein Homology CDS 13360 13902 . - 0 ID=cds-HBQ7388946.1;Parent=gene-L8R42_000822;Dbxref=NCBI_GP:HBQ7388946.1;Name=HBQ7388946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446563.1;locus_tag=L8R42_000822;product=IS3 family transposase;protein_id=HBQ7388946.1;transl_table=11 DAFVNP010000009.1 tpg gene 14254 16323 . - . ID=gene-L8R42_000823;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=L8R42_000823 DAFVNP010000009.1 Protein Homology CDS 14254 16323 . - 0 ID=cds-HBQ7388947.1;Parent=gene-L8R42_000823;Dbxref=NCBI_GP:HBQ7388947.1;Name=HBQ7388947.1;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=L8R42_000823;product=glycine--tRNA ligase subunit beta;protein_id=HBQ7388947.1;transl_table=11 DAFVNP010000009.1 tpg gene 16333 17244 . - . ID=gene-L8R42_000824;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=L8R42_000824 DAFVNP010000009.1 Protein Homology CDS 16333 17244 . - 0 ID=cds-HBQ7388948.1;Parent=gene-L8R42_000824;Dbxref=NCBI_GP:HBQ7388948.1;Name=HBQ7388948.1;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=L8R42_000824;product=glycine--tRNA ligase subunit alpha;protein_id=HBQ7388948.1;transl_table=11 DAFVNP010000009.1 tpg gene 17383 17685 . - . ID=gene-L8R42_000825;Name=L8R42_000825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000825 DAFVNP010000009.1 Protein Homology CDS 17383 17685 . - 0 ID=cds-HBQ7388949.1;Parent=gene-L8R42_000825;Dbxref=NCBI_GP:HBQ7388949.1;Name=HBQ7388949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=L8R42_000825;product=YsaB family lipoprotein;protein_id=HBQ7388949.1;transl_table=11 DAFVNP010000009.1 tpg gene 17851 18846 . + . ID=gene-L8R42_000826;Name=L8R42_000826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000826 DAFVNP010000009.1 Protein Homology CDS 17851 18846 . + 0 ID=cds-HBQ7388950.1;Parent=gene-L8R42_000826;Dbxref=NCBI_GP:HBQ7388950.1;Name=HBQ7388950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=L8R42_000826;product=acyltransferase;protein_id=HBQ7388950.1;transl_table=11 DAFVNP010000009.1 tpg gene 18869 19222 . - . ID=gene-L8R42_000827;Name=L8R42_000827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000827 DAFVNP010000009.1 Protein Homology CDS 18869 19222 . - 0 ID=cds-HBQ7388951.1;Parent=gene-L8R42_000827;Dbxref=NCBI_GP:HBQ7388951.1;Name=HBQ7388951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=L8R42_000827;product=YiaA/YiaB family protein;protein_id=HBQ7388951.1;transl_table=11 DAFVNP010000009.1 tpg gene 19397 20851 . - . ID=gene-L8R42_000828;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=L8R42_000828 DAFVNP010000009.1 Protein Homology CDS 19397 20851 . - 0 ID=cds-HBQ7388952.1;Parent=gene-L8R42_000828;Dbxref=NCBI_GP:HBQ7388952.1;Name=HBQ7388952.1;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=L8R42_000828;product=xylulokinase;protein_id=HBQ7388952.1;transl_table=11 DAFVNP010000009.1 tpg gene 20951 22273 . - . ID=gene-L8R42_000829;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=L8R42_000829 DAFVNP010000009.1 Protein Homology CDS 20951 22273 . - 0 ID=cds-HBQ7388953.1;Parent=gene-L8R42_000829;Dbxref=NCBI_GP:HBQ7388953.1;Name=HBQ7388953.1;gbkey=CDS;gene=xylA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=L8R42_000829;product=xylose isomerase;protein_id=HBQ7388953.1;transl_table=11 DAFVNP010000009.1 tpg gene 22636 23814 . + . ID=gene-L8R42_000830;Name=L8R42_000830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000830 DAFVNP010000009.1 Protein Homology CDS 22636 23814 . + 0 ID=cds-HBQ7388954.1;Parent=gene-L8R42_000830;Dbxref=NCBI_GP:HBQ7388954.1;Name=HBQ7388954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=L8R42_000830;product=XylR family transcriptional regulator;protein_id=HBQ7388954.1;transl_table=11 DAFVNP010000009.1 tpg gene 23875 24699 . - . ID=gene-L8R42_000831;Name=L8R42_000831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000831 DAFVNP010000009.1 Protein Homology CDS 23875 24699 . - 0 ID=cds-HBQ7388955.1;Parent=gene-L8R42_000831;Dbxref=NCBI_GP:HBQ7388955.1;Name=HBQ7388955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=L8R42_000831;product=protein bax;protein_id=HBQ7388955.1;transl_table=11 DAFVNP010000009.1 tpg gene 25015 27042 . + . ID=gene-L8R42_000832;Name=L8R42_000832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000832 DAFVNP010000009.1 Protein Homology CDS 25015 27042 . + 0 ID=cds-HBQ7388956.1;Parent=gene-L8R42_000832;Dbxref=NCBI_GP:HBQ7388956.1;Name=HBQ7388956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=L8R42_000832;product=alpha-amylase;protein_id=HBQ7388956.1;transl_table=11 DAFVNP010000009.1 tpg gene 27216 28466 . + . ID=gene-L8R42_000833;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=L8R42_000833 DAFVNP010000009.1 Protein Homology CDS 27216 28466 . + 0 ID=cds-HBQ7388957.1;Parent=gene-L8R42_000833;Dbxref=NCBI_GP:HBQ7388957.1;Name=HBQ7388957.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=L8R42_000833;product=valine--pyruvate transaminase;protein_id=HBQ7388957.1;transl_table=11 DAFVNP010000009.1 tpg gene 28503 28976 . - . ID=gene-L8R42_000834;Name=L8R42_000834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000834 DAFVNP010000009.1 Protein Homology CDS 28503 28976 . - 0 ID=cds-HBQ7388958.1;Parent=gene-L8R42_000834;Dbxref=NCBI_GP:HBQ7388958.1;Name=HBQ7388958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=L8R42_000834;product=4Fe-4S dicluster domain-containing protein;protein_id=HBQ7388958.1;transl_table=11 DAFVNP010000009.1 tpg gene 29093 29893 . - . ID=gene-L8R42_000835;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=L8R42_000835 DAFVNP010000009.1 Protein Homology CDS 29093 29893 . - 0 ID=cds-HBQ7388959.1;Parent=gene-L8R42_000835;Dbxref=NCBI_GP:HBQ7388959.1;Name=HBQ7388959.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=L8R42_000835;product=IclR family transcriptional regulator YiaJ;protein_id=HBQ7388959.1;transl_table=11 DAFVNP010000009.1 tpg gene 30123 31121 . + . ID=gene-L8R42_000836;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=L8R42_000836 DAFVNP010000009.1 Protein Homology CDS 30123 31121 . + 0 ID=cds-HBQ7388960.1;Parent=gene-L8R42_000836;Dbxref=NCBI_GP:HBQ7388960.1;Name=HBQ7388960.1;gbkey=CDS;gene=yiaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=L8R42_000836;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=HBQ7388960.1;transl_table=11 DAFVNP010000009.1 tpg gene 31133 31597 . + . ID=gene-L8R42_000837;Name=L8R42_000837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000837 DAFVNP010000009.1 Protein Homology CDS 31133 31597 . + 0 ID=cds-HBQ7388961.1;Parent=gene-L8R42_000837;Dbxref=NCBI_GP:HBQ7388961.1;Name=HBQ7388961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=L8R42_000837;product=YhcH/YjgK/YiaL family protein;protein_id=HBQ7388961.1;transl_table=11 DAFVNP010000009.1 tpg gene 31621 32553 . + . ID=gene-L8R42_000838;Name=L8R42_000838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000838 DAFVNP010000009.1 Protein Homology CDS 31621 32553 . + 0 ID=cds-HBQ7388962.1;Parent=gene-L8R42_000838;Dbxref=NCBI_GP:HBQ7388962.1;Name=HBQ7388962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=L8R42_000838;product=DUF4862 family protein;protein_id=HBQ7388962.1;transl_table=11 DAFVNP010000009.1 tpg gene 32692 33165 . + . ID=gene-L8R42_000839;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=L8R42_000839 DAFVNP010000009.1 Protein Homology CDS 32692 33165 . + 0 ID=cds-HBQ7388963.1;Parent=gene-L8R42_000839;Dbxref=NCBI_GP:HBQ7388963.1;Name=HBQ7388963.1;gbkey=CDS;gene=yiaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=L8R42_000839;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=HBQ7388963.1;transl_table=11 DAFVNP010000009.1 tpg gene 33168 34445 . + . ID=gene-L8R42_000840;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=L8R42_000840 DAFVNP010000009.1 Protein Homology CDS 33168 34445 . + 0 ID=cds-HBQ7388964.1;Parent=gene-L8R42_000840;Dbxref=NCBI_GP:HBQ7388964.1;Name=HBQ7388964.1;gbkey=CDS;gene=yiaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=L8R42_000840;product=2%2C3-diketo-L-gulonate transporter large permease YiaN;protein_id=HBQ7388964.1;transl_table=11 DAFVNP010000009.1 tpg gene 34457 35443 . + . ID=gene-L8R42_000841;Name=L8R42_000841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000841 DAFVNP010000009.1 Protein Homology CDS 34457 35443 . + 0 ID=cds-HBQ7388965.1;Parent=gene-L8R42_000841;Dbxref=NCBI_GP:HBQ7388965.1;Name=HBQ7388965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=L8R42_000841;product=TRAP transporter substrate-binding protein;protein_id=HBQ7388965.1;transl_table=11 DAFVNP010000009.1 tpg gene 35447 36943 . + . ID=gene-L8R42_000842;Name=L8R42_000842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000842 DAFVNP010000009.1 Protein Homology CDS 35447 36943 . + 0 ID=cds-HBQ7388966.1;Parent=gene-L8R42_000842;Dbxref=NCBI_GP:HBQ7388966.1;Name=HBQ7388966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=L8R42_000842;product=carbohydrate kinase;protein_id=HBQ7388966.1;transl_table=11 DAFVNP010000009.1 tpg gene 36940 37602 . + . ID=gene-L8R42_000843;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=L8R42_000843 DAFVNP010000009.1 Protein Homology CDS 36940 37602 . + 0 ID=cds-HBQ7388967.1;Parent=gene-L8R42_000843;Dbxref=NCBI_GP:HBQ7388967.1;Name=HBQ7388967.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=L8R42_000843;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=HBQ7388967.1;transl_table=11 DAFVNP010000009.1 tpg gene 37595 38455 . + . ID=gene-L8R42_000844;Name=L8R42_000844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000844 DAFVNP010000009.1 Protein Homology CDS 37595 38455 . + 0 ID=cds-HBQ7388968.1;Parent=gene-L8R42_000844;Dbxref=NCBI_GP:HBQ7388968.1;Name=HBQ7388968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=L8R42_000844;product=L-ribulose-5-phosphate 3-epimerase;protein_id=HBQ7388968.1;transl_table=11 DAFVNP010000009.1 tpg gene 38449 39144 . + . ID=gene-L8R42_000845;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=L8R42_000845 DAFVNP010000009.1 Protein Homology CDS 38449 39144 . + 0 ID=cds-HBQ7388969.1;Parent=gene-L8R42_000845;Dbxref=NCBI_GP:HBQ7388969.1;Name=HBQ7388969.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=L8R42_000845;product=L-ribulose-5-phosphate 4-epimerase;protein_id=HBQ7388969.1;transl_table=11 DAFVNP010000009.1 tpg gene 39305 40120 . - . ID=gene-L8R42_000846;Name=L8R42_000846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000846 DAFVNP010000009.1 Protein Homology CDS 39305 40120 . - 0 ID=cds-HBQ7388970.1;Parent=gene-L8R42_000846;Dbxref=NCBI_GP:HBQ7388970.1;Name=HBQ7388970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=L8R42_000846;product=helix-turn-helix domain-containing protein;protein_id=HBQ7388970.1;transl_table=11 DAFVNP010000009.1 tpg gene 40384 42339 . + . ID=gene-L8R42_000847;Name=L8R42_000847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000847 DAFVNP010000009.1 Protein Homology CDS 40384 42339 . + 0 ID=cds-HBQ7388971.1;Parent=gene-L8R42_000847;Dbxref=NCBI_GP:HBQ7388971.1;Name=HBQ7388971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=L8R42_000847;product=glycoside hydrolase family 127 protein;protein_id=HBQ7388971.1;transl_table=11 DAFVNP010000009.1 tpg gene 42569 44107 . - . ID=gene-L8R42_000848;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=L8R42_000848 DAFVNP010000009.1 Protein Homology CDS 42569 44107 . - 0 ID=cds-HBQ7388972.1;Parent=gene-L8R42_000848;Dbxref=NCBI_GP:HBQ7388972.1;Name=HBQ7388972.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=L8R42_000848;product=aldehyde dehydrogenase AldB;protein_id=HBQ7388972.1;transl_table=11 DAFVNP010000009.1 tpg gene 44276 45157 . + . ID=gene-L8R42_000849;Name=L8R42_000849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000849 DAFVNP010000009.1 Protein Homology CDS 44276 45157 . + 0 ID=cds-HBQ7388973.1;Parent=gene-L8R42_000849;Dbxref=NCBI_GP:HBQ7388973.1;Name=HBQ7388973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=L8R42_000849;product=ROK family protein;protein_id=HBQ7388973.1;transl_table=11 DAFVNP010000009.1 tpg gene 45405 47255 . - . ID=gene-L8R42_000850;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=L8R42_000850 DAFVNP010000009.1 Protein Homology CDS 45405 47255 . - 0 ID=cds-HBQ7388974.1;Parent=gene-L8R42_000850;Dbxref=NCBI_GP:HBQ7388974.1;Name=HBQ7388974.1;gbkey=CDS;gene=selB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=L8R42_000850;product=selenocysteine-specific translation elongation factor;protein_id=HBQ7388974.1;transl_table=11 DAFVNP010000009.1 tpg gene 47252 48643 . - . ID=gene-L8R42_000851;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=L8R42_000851 DAFVNP010000009.1 Protein Homology CDS 47252 48643 . - 0 ID=cds-HBQ7388975.1;Parent=gene-L8R42_000851;Dbxref=NCBI_GP:HBQ7388975.1;Name=HBQ7388975.1;gbkey=CDS;gene=selA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=L8R42_000851;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=HBQ7388975.1;transl_table=11 DAFVNP010000009.1 tpg gene 48742 49350 . - . ID=gene-L8R42_000852;Name=L8R42_000852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000852 DAFVNP010000009.1 Protein Homology CDS 48742 49350 . - 0 ID=cds-HBQ7388976.1;Parent=gene-L8R42_000852;Dbxref=NCBI_GP:HBQ7388976.1;Name=HBQ7388976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=L8R42_000852;product=glutathione S-transferase;protein_id=HBQ7388976.1;transl_table=11 DAFVNP010000009.1 tpg gene 49826 51742 . + . ID=gene-L8R42_000853;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=L8R42_000853 DAFVNP010000009.1 Protein Homology CDS 49826 51742 . + 0 ID=cds-HBQ7388977.1;Parent=gene-L8R42_000853;Dbxref=NCBI_GP:HBQ7388977.1;Name=HBQ7388977.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=L8R42_000853;product=PTS mannitol transporter subunit IICBA;protein_id=HBQ7388977.1;transl_table=11 DAFVNP010000009.1 tpg gene 51973 53121 . + . ID=gene-L8R42_000854;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=L8R42_000854 DAFVNP010000009.1 Protein Homology CDS 51973 53121 . + 0 ID=cds-HBQ7388978.1;Parent=gene-L8R42_000854;Dbxref=NCBI_GP:HBQ7388978.1;Name=HBQ7388978.1;gbkey=CDS;gene=mtlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=L8R42_000854;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=HBQ7388978.1;transl_table=11 DAFVNP010000009.1 tpg gene 53118 53708 . + . ID=gene-L8R42_000855;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=L8R42_000855 DAFVNP010000009.1 Protein Homology CDS 53118 53708 . + 0 ID=cds-HBQ7388979.1;Parent=gene-L8R42_000855;Dbxref=NCBI_GP:HBQ7388979.1;Name=HBQ7388979.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=L8R42_000855;product=mannitol operon repressor MtlR;protein_id=HBQ7388979.1;transl_table=11 DAFVNP010000009.1 tpg gene 53718 53927 . - . ID=gene-L8R42_000856;Name=L8R42_000856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000856 DAFVNP010000009.1 Protein Homology CDS 53718 53927 . - 0 ID=cds-HBQ7388980.1;Parent=gene-L8R42_000856;Dbxref=NCBI_GP:HBQ7388980.1;Name=HBQ7388980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=L8R42_000856;product=hypothetical protein;protein_id=HBQ7388980.1;transl_table=11 DAFVNP010000009.1 tpg gene 54218 54580 . + . ID=gene-L8R42_000857;Name=L8R42_000857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000857 DAFVNP010000009.1 Protein Homology CDS 54218 54580 . + 0 ID=cds-HBQ7388981.1;Parent=gene-L8R42_000857;Dbxref=NCBI_GP:HBQ7388981.1;Name=HBQ7388981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=L8R42_000857;product=YibL family ribosome-associated protein;protein_id=HBQ7388981.1;transl_table=11 DAFVNP010000009.1 tpg gene 54854 56509 . + . ID=gene-L8R42_000858;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=L8R42_000858 DAFVNP010000009.1 Protein Homology CDS 54854 56509 . + 0 ID=cds-HBQ7388982.1;Parent=gene-L8R42_000858;Dbxref=NCBI_GP:HBQ7388982.1;Name=HBQ7388982.1;gbkey=CDS;gene=lldP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=L8R42_000858;product=L-lactate permease;protein_id=HBQ7388982.1;transl_table=11 DAFVNP010000009.1 tpg gene 56506 57282 . + . ID=gene-L8R42_000859;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=L8R42_000859 DAFVNP010000009.1 Protein Homology CDS 56506 57282 . + 0 ID=cds-HBQ7388983.1;Parent=gene-L8R42_000859;Dbxref=NCBI_GP:HBQ7388983.1;Name=HBQ7388983.1;gbkey=CDS;gene=lldR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=L8R42_000859;product=transcriptional regulator LldR;protein_id=HBQ7388983.1;transl_table=11 DAFVNP010000009.1 tpg gene 57279 58469 . + . ID=gene-L8R42_000860;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=L8R42_000860 DAFVNP010000009.1 Protein Homology CDS 57279 58469 . + 0 ID=cds-HBQ7388984.1;Parent=gene-L8R42_000860;Dbxref=NCBI_GP:HBQ7388984.1;Name=HBQ7388984.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=L8R42_000860;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=HBQ7388984.1;transl_table=11 DAFVNP010000009.1 tpg gene 58534 59007 . + . ID=gene-L8R42_000861;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=L8R42_000861 DAFVNP010000009.1 Protein Homology CDS 58534 59007 . + 0 ID=cds-HBQ7388985.1;Parent=gene-L8R42_000861;Dbxref=NCBI_GP:HBQ7388985.1;Name=HBQ7388985.1;gbkey=CDS;gene=trmL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=L8R42_000861;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=HBQ7388985.1;transl_table=11 DAFVNP010000009.1 tpg gene 59075 60079 . - . ID=gene-L8R42_000862;Name=L8R42_000862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000862 DAFVNP010000009.1 Protein Homology CDS 59075 60079 . - 0 ID=cds-HBQ7388986.1;Parent=gene-L8R42_000862;Dbxref=NCBI_GP:HBQ7388986.1;Name=HBQ7388986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=L8R42_000862;product=LacI family DNA-binding transcriptional regulator;protein_id=HBQ7388986.1;transl_table=11 DAFVNP010000009.1 tpg gene 60398 61594 . + . ID=gene-L8R42_000863;Name=L8R42_000863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000863 DAFVNP010000009.1 Protein Homology CDS 60398 61594 . + 0 ID=cds-HBQ7388987.1;Parent=gene-L8R42_000863;Dbxref=NCBI_GP:HBQ7388987.1;Name=HBQ7388987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=L8R42_000863;product=L-talarate/galactarate dehydratase;protein_id=HBQ7388987.1;transl_table=11 DAFVNP010000009.1 tpg gene 61668 62978 . + . ID=gene-L8R42_000864;Name=L8R42_000864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000864 DAFVNP010000009.1 Protein Homology CDS 61668 62978 . + 0 ID=cds-HBQ7388988.1;Parent=gene-L8R42_000864;Dbxref=NCBI_GP:HBQ7388988.1;Name=HBQ7388988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=L8R42_000864;product=MFS transporter;protein_id=HBQ7388988.1;transl_table=11 DAFVNP010000009.1 tpg gene 63061 63882 . - . ID=gene-L8R42_000865;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=L8R42_000865 DAFVNP010000009.1 Protein Homology CDS 63061 63882 . - 0 ID=cds-HBQ7388989.1;Parent=gene-L8R42_000865;Dbxref=NCBI_GP:HBQ7388989.1;Name=HBQ7388989.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=L8R42_000865;product=serine O-acetyltransferase;protein_id=HBQ7388989.1;transl_table=11 DAFVNP010000009.1 tpg gene 63960 64979 . - . ID=gene-L8R42_000866;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=L8R42_000866 DAFVNP010000009.1 Protein Homology CDS 63960 64979 . - 0 ID=cds-HBQ7388990.1;Parent=gene-L8R42_000866;Dbxref=NCBI_GP:HBQ7388990.1;Name=HBQ7388990.1;gbkey=CDS;gene=gpsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=L8R42_000866;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=HBQ7388990.1;transl_table=11 DAFVNP010000009.1 tpg gene 64979 65446 . - . ID=gene-L8R42_000867;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=L8R42_000867 DAFVNP010000009.1 Protein Homology CDS 64979 65446 . - 0 ID=cds-HBQ7388991.1;Parent=gene-L8R42_000867;Dbxref=NCBI_GP:HBQ7388991.1;Name=HBQ7388991.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=L8R42_000867;product=protein-export chaperone SecB;protein_id=HBQ7388991.1;transl_table=11 DAFVNP010000009.1 tpg gene 65490 65741 . - . ID=gene-L8R42_000868;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=L8R42_000868 DAFVNP010000009.1 Protein Homology CDS 65490 65741 . - 0 ID=cds-HBQ7388992.1;Parent=gene-L8R42_000868;Dbxref=NCBI_GP:HBQ7388992.1;Name=HBQ7388992.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=L8R42_000868;product=glutaredoxin 3;protein_id=HBQ7388992.1;transl_table=11 DAFVNP010000009.1 tpg gene 65827 66258 . - . ID=gene-L8R42_000869;Name=L8R42_000869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000869 DAFVNP010000009.1 Protein Homology CDS 65827 66258 . - 0 ID=cds-HBQ7388993.1;Parent=gene-L8R42_000869;Dbxref=NCBI_GP:HBQ7388993.1;Name=HBQ7388993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=L8R42_000869;product=rhodanese-like domain-containing protein;protein_id=HBQ7388993.1;transl_table=11 DAFVNP010000009.1 tpg gene 66506 68050 . + . ID=gene-L8R42_000870;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=L8R42_000870 DAFVNP010000009.1 Protein Homology CDS 66506 68050 . + 0 ID=cds-HBQ7388994.1;Parent=gene-L8R42_000870;Dbxref=NCBI_GP:HBQ7388994.1;Name=HBQ7388994.1;gbkey=CDS;gene=gpmM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=L8R42_000870;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=HBQ7388994.1;transl_table=11 DAFVNP010000009.1 tpg gene 68060 69343 . + . ID=gene-L8R42_000871;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=L8R42_000871 DAFVNP010000009.1 Protein Homology CDS 68060 69343 . + 0 ID=cds-HBQ7388995.1;Parent=gene-L8R42_000871;Dbxref=NCBI_GP:HBQ7388995.1;Name=HBQ7388995.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462605.1;locus_tag=L8R42_000871;product=murein hydrolase activator EnvC;protein_id=HBQ7388995.1;transl_table=11 DAFVNP010000009.1 tpg gene 69347 70309 . + . ID=gene-L8R42_000872;Name=L8R42_000872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000872 DAFVNP010000009.1 Protein Homology CDS 69347 70309 . + 0 ID=cds-HBQ7388996.1;Parent=gene-L8R42_000872;Dbxref=NCBI_GP:HBQ7388996.1;Name=HBQ7388996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=L8R42_000872;product=divergent polysaccharide deacetylase family protein;protein_id=HBQ7388996.1;transl_table=11 DAFVNP010000009.1 tpg gene 70296 71330 . - . ID=gene-L8R42_000873;Name=L8R42_000873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000873 DAFVNP010000009.1 Protein Homology CDS 70296 71330 . - 0 ID=cds-HBQ7388997.1;Parent=gene-L8R42_000873;Dbxref=NCBI_GP:HBQ7388997.1;Name=HBQ7388997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=L8R42_000873;product=glycosyltransferase;protein_id=HBQ7388997.1;transl_table=11 DAFVNP010000009.1 tpg gene 71623 72648 . - . ID=gene-L8R42_000874;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=L8R42_000874 DAFVNP010000009.1 Protein Homology CDS 71623 72648 . - 0 ID=cds-HBQ7388998.1;Parent=gene-L8R42_000874;Dbxref=NCBI_GP:HBQ7388998.1;Name=HBQ7388998.1;gbkey=CDS;gene=tdh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=L8R42_000874;product=L-threonine 3-dehydrogenase;protein_id=HBQ7388998.1;transl_table=11 DAFVNP010000009.1 tpg gene 72658 73854 . - . ID=gene-L8R42_000875;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=L8R42_000875 DAFVNP010000009.1 Protein Homology CDS 72658 73854 . - 0 ID=cds-HBQ7388999.1;Parent=gene-L8R42_000875;Dbxref=NCBI_GP:HBQ7388999.1;Name=HBQ7388999.1;gbkey=CDS;gene=kbl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=L8R42_000875;product=glycine C-acetyltransferase;protein_id=HBQ7388999.1;transl_table=11 DAFVNP010000009.1 tpg gene 74057 74989 . + . ID=gene-L8R42_000876;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=L8R42_000876 DAFVNP010000009.1 Protein Homology CDS 74057 74989 . + 0 ID=cds-HBQ7389000.1;Parent=gene-L8R42_000876;Dbxref=NCBI_GP:HBQ7389000.1;Name=HBQ7389000.1;gbkey=CDS;gene=rfaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=L8R42_000876;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=HBQ7389000.1;transl_table=11 DAFVNP010000009.1 tpg gene 74992 76038 . + . ID=gene-L8R42_000877;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=L8R42_000877 DAFVNP010000009.1 Protein Homology CDS 74992 76038 . + 0 ID=cds-HBQ7389001.1;Parent=gene-L8R42_000877;Dbxref=NCBI_GP:HBQ7389001.1;Name=HBQ7389001.1;gbkey=CDS;gene=rfaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728214.1;locus_tag=L8R42_000877;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=HBQ7389001.1;transl_table=11 DAFVNP010000009.1 tpg gene 76038 76991 . + . ID=gene-L8R42_000878;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=L8R42_000878 DAFVNP010000009.1 Protein Homology CDS 76038 76991 . + 0 ID=cds-HBQ7389002.1;Parent=gene-L8R42_000878;Dbxref=NCBI_GP:HBQ7389002.1;Name=HBQ7389002.1;gbkey=CDS;gene=rfaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=L8R42_000878;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=HBQ7389002.1;transl_table=11 DAFVNP010000009.1 tpg gene 77031 78245 . + . ID=gene-L8R42_000879;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=L8R42_000879 DAFVNP010000009.1 Protein Homology CDS 77031 78245 . + 0 ID=cds-HBQ7389003.1;Parent=gene-L8R42_000879;Dbxref=NCBI_GP:HBQ7389003.1;Name=HBQ7389003.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=L8R42_000879;product=O-antigen ligase RfaL;protein_id=HBQ7389003.1;transl_table=11 DAFVNP010000009.1 tpg gene 78302 79447 . - . ID=gene-L8R42_000880;Name=L8R42_000880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000880 DAFVNP010000009.1 Protein Homology CDS 78302 79447 . - 0 ID=cds-HBQ7389004.1;Parent=gene-L8R42_000880;Dbxref=NCBI_GP:HBQ7389004.1;Name=HBQ7389004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=L8R42_000880;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=HBQ7389004.1;transl_table=11 DAFVNP010000009.1 tpg gene 79547 80356 . - . ID=gene-L8R42_000881;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=L8R42_000881 DAFVNP010000009.1 Protein Homology CDS 79547 80356 . - 0 ID=cds-HBQ7389005.1;Parent=gene-L8R42_000881;Dbxref=NCBI_GP:HBQ7389005.1;Name=HBQ7389005.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=L8R42_000881;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=HBQ7389005.1;transl_table=11 DAFVNP010000009.1 tpg gene 80506 81204 . - . ID=gene-L8R42_000882;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=L8R42_000882 DAFVNP010000009.1 Protein Homology CDS 80506 81204 . - 0 ID=cds-HBQ7389006.1;Parent=gene-L8R42_000882;Dbxref=NCBI_GP:HBQ7389006.1;Name=HBQ7389006.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=L8R42_000882;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=HBQ7389006.1;transl_table=11 DAFVNP010000009.1 tpg gene 81227 81437 . - . ID=gene-L8R42_000883;Name=L8R42_000883;end_range=81437,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000883;partial=true DAFVNP010000009.1 Protein Homology CDS 81227 81437 . - 1 ID=cds-HBQ7389007.1;Parent=gene-L8R42_000883;Dbxref=NCBI_GP:HBQ7389007.1;Name=HBQ7389007.1;end_range=81437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=L8R42_000883;partial=true;product=lipopolysaccharide 1%2C2-glucosyltransferase;protein_id=HBQ7389007.1;transl_table=11 ##sequence-region DAFVNP010000010.1 1 80962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000010.1 tpg region 1 80962 . + . ID=DAFVNP010000010.1:1..80962;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000010.1 tpg gene 39 584 . + . ID=gene-L8R42_000884;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=L8R42_000884 DAFVNP010000010.1 Protein Homology CDS 39 584 . + 0 ID=cds-HBQ7389008.1;Parent=gene-L8R42_000884;Dbxref=NCBI_GP:HBQ7389008.1;Name=HBQ7389008.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=L8R42_000884;product=fimbrial protein SthA;protein_id=HBQ7389008.1;transl_table=11 DAFVNP010000010.1 tpg gene 655 1338 . + . ID=gene-L8R42_000885;Name=L8R42_000885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000885 DAFVNP010000010.1 Protein Homology CDS 655 1338 . + 0 ID=cds-HBQ7389009.1;Parent=gene-L8R42_000885;Dbxref=NCBI_GP:HBQ7389009.1;Name=HBQ7389009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=L8R42_000885;product=fimbrial assembly chaperone;protein_id=HBQ7389009.1;transl_table=11 DAFVNP010000010.1 tpg gene 1384 3921 . + . ID=gene-L8R42_000886;Name=L8R42_000886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000886 DAFVNP010000010.1 Protein Homology CDS 1384 3921 . + 0 ID=cds-HBQ7389010.1;Parent=gene-L8R42_000886;Dbxref=NCBI_GP:HBQ7389010.1;Name=HBQ7389010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=L8R42_000886;product=fimbrial outer membrane usher protein;protein_id=HBQ7389010.1;transl_table=11 DAFVNP010000010.1 tpg gene 3939 4496 . + . ID=gene-L8R42_000887;Name=L8R42_000887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000887 DAFVNP010000010.1 Protein Homology CDS 3939 4496 . + 0 ID=cds-HBQ7389011.1;Parent=gene-L8R42_000887;Dbxref=NCBI_GP:HBQ7389011.1;Name=HBQ7389011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=L8R42_000887;product=fimbrial protein SthD;protein_id=HBQ7389011.1;transl_table=11 DAFVNP010000010.1 tpg gene 4537 5622 . + . ID=gene-L8R42_000888;Name=L8R42_000888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000888 DAFVNP010000010.1 Protein Homology CDS 4537 5622 . + 0 ID=cds-HBQ7389012.1;Parent=gene-L8R42_000888;Dbxref=NCBI_GP:HBQ7389012.1;Name=HBQ7389012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=L8R42_000888;product=type 1 fimbrial protein;protein_id=HBQ7389012.1;transl_table=11 DAFVNP010000010.1 tpg gene 5680 7029 . - . ID=gene-L8R42_000889;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=L8R42_000889 DAFVNP010000010.1 Protein Homology CDS 5680 7029 . - 0 ID=cds-HBQ7389013.1;Parent=gene-L8R42_000889;Dbxref=NCBI_GP:HBQ7389013.1;Name=HBQ7389013.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=L8R42_000889;product=cell envelope integrity protein CreD;protein_id=HBQ7389013.1;transl_table=11 DAFVNP010000010.1 tpg gene 7087 8511 . - . ID=gene-L8R42_000890;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=L8R42_000890 DAFVNP010000010.1 Protein Homology CDS 7087 8511 . - 0 ID=cds-HBQ7389014.1;Parent=gene-L8R42_000890;Dbxref=NCBI_GP:HBQ7389014.1;Name=HBQ7389014.1;gbkey=CDS;gene=creC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=L8R42_000890;product=two-component system sensor histidine kinase CreC;protein_id=HBQ7389014.1;transl_table=11 DAFVNP010000010.1 tpg gene 8511 9200 . - . ID=gene-L8R42_000891;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=L8R42_000891 DAFVNP010000010.1 Protein Homology CDS 8511 9200 . - 0 ID=cds-HBQ7389015.1;Parent=gene-L8R42_000891;Dbxref=NCBI_GP:HBQ7389015.1;Name=HBQ7389015.1;gbkey=CDS;gene=creB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=L8R42_000891;product=two-component system response regulator CreB;protein_id=HBQ7389015.1;transl_table=11 DAFVNP010000010.1 tpg gene 9213 9686 . - . ID=gene-L8R42_000892;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=L8R42_000892 DAFVNP010000010.1 Protein Homology CDS 9213 9686 . - 0 ID=cds-HBQ7389016.1;Parent=gene-L8R42_000892;Dbxref=NCBI_GP:HBQ7389016.1;Name=HBQ7389016.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=L8R42_000892;product=protein CreA;protein_id=HBQ7389016.1;transl_table=11 DAFVNP010000010.1 tpg gene 9898 10767 . + . ID=gene-L8R42_000893;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=L8R42_000893 DAFVNP010000010.1 Protein Homology CDS 9898 10767 . + 0 ID=cds-HBQ7389017.1;Parent=gene-L8R42_000893;Dbxref=NCBI_GP:HBQ7389017.1;Name=HBQ7389017.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=L8R42_000893;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=HBQ7389017.1;transl_table=11 DAFVNP010000010.1 tpg gene 10764 11411 . - . ID=gene-L8R42_000894;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=L8R42_000894 DAFVNP010000010.1 Protein Homology CDS 10764 11411 . - 0 ID=cds-HBQ7389018.1;Parent=gene-L8R42_000894;Dbxref=NCBI_GP:HBQ7389018.1;Name=HBQ7389018.1;gbkey=CDS;gene=gpmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=L8R42_000894;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=HBQ7389018.1;transl_table=11 DAFVNP010000010.1 tpg gene 11460 11975 . + . ID=gene-L8R42_000895;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=L8R42_000895 DAFVNP010000010.1 Protein Homology CDS 11460 11975 . + 0 ID=cds-HBQ7389019.1;Parent=gene-L8R42_000895;Dbxref=NCBI_GP:HBQ7389019.1;Name=HBQ7389019.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=L8R42_000895;product=inosine/xanthosine triphosphatase;protein_id=HBQ7389019.1;transl_table=11 DAFVNP010000010.1 tpg gene 12077 12403 . - . ID=gene-L8R42_000896;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=L8R42_000896 DAFVNP010000010.1 Protein Homology CDS 12077 12403 . - 0 ID=cds-HBQ7389020.1;Parent=gene-L8R42_000896;Dbxref=NCBI_GP:HBQ7389020.1;Name=HBQ7389020.1;gbkey=CDS;gene=trpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=L8R42_000896;product=trp operon repressor;protein_id=HBQ7389020.1;transl_table=11 DAFVNP010000010.1 tpg gene 12461 14398 . - . ID=gene-L8R42_000897;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=L8R42_000897 DAFVNP010000010.1 Protein Homology CDS 12461 14398 . - 0 ID=cds-HBQ7389021.1;Parent=gene-L8R42_000897;Dbxref=NCBI_GP:HBQ7389021.1;Name=HBQ7389021.1;gbkey=CDS;gene=sltY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=L8R42_000897;product=murein transglycosylase;protein_id=HBQ7389021.1;transl_table=11 DAFVNP010000010.1 tpg gene 14607 16274 . + . ID=gene-L8R42_000898;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=L8R42_000898 DAFVNP010000010.1 Protein Homology CDS 14607 16274 . + 0 ID=cds-HBQ7389022.1;Parent=gene-L8R42_000898;Dbxref=NCBI_GP:HBQ7389022.1;Name=HBQ7389022.1;gbkey=CDS;gene=ettA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=L8R42_000898;product=energy-dependent translational throttle protein EttA;protein_id=HBQ7389022.1;transl_table=11 DAFVNP010000010.1 tpg gene 16392 17624 . - . ID=gene-L8R42_000899;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=L8R42_000899 DAFVNP010000010.1 Protein Homology CDS 16392 17624 . - 0 ID=cds-HBQ7389023.1;Parent=gene-L8R42_000899;Dbxref=NCBI_GP:HBQ7389023.1;Name=HBQ7389023.1;gbkey=CDS;gene=nadR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=L8R42_000899;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=HBQ7389023.1;transl_table=11 DAFVNP010000010.1 tpg gene 17765 19147 . - . ID=gene-L8R42_000900;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=L8R42_000900 DAFVNP010000010.1 Protein Homology CDS 17765 19147 . - 0 ID=cds-HBQ7389024.1;Parent=gene-L8R42_000900;Dbxref=NCBI_GP:HBQ7389024.1;Name=HBQ7389024.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=L8R42_000900;product=DNA repair protein RadA;protein_id=HBQ7389024.1;transl_table=11 DAFVNP010000010.1 tpg gene 19231 20199 . - . ID=gene-L8R42_000901;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=L8R42_000901 DAFVNP010000010.1 Protein Homology CDS 19231 20199 . - 0 ID=cds-HBQ7389025.1;Parent=gene-L8R42_000901;Dbxref=NCBI_GP:HBQ7389025.1;Name=HBQ7389025.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=L8R42_000901;product=phosphoserine phosphatase;protein_id=HBQ7389025.1;transl_table=11 DAFVNP010000010.1 tpg gene 20316 20960 . + . ID=gene-L8R42_000902;Name=L8R42_000902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000902 DAFVNP010000010.1 Protein Homology CDS 20316 20960 . + 0 ID=cds-HBQ7389026.1;Parent=gene-L8R42_000902;Dbxref=NCBI_GP:HBQ7389026.1;Name=HBQ7389026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=L8R42_000902;product=YtjB family periplasmic protein;protein_id=HBQ7389026.1;transl_table=11 DAFVNP010000010.1 tpg gene 20994 22010 . + . ID=gene-L8R42_000903;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=L8R42_000903 DAFVNP010000010.1 Protein Homology CDS 20994 22010 . + 0 ID=cds-HBQ7389027.1;Parent=gene-L8R42_000903;Dbxref=NCBI_GP:HBQ7389027.1;Name=HBQ7389027.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=L8R42_000903;product=lipoate--protein ligase LplA;protein_id=HBQ7389027.1;transl_table=11 DAFVNP010000010.1 tpg gene 22321 23010 . + . ID=gene-L8R42_000904;Name=L8R42_000904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000904 DAFVNP010000010.1 Protein Homology CDS 22321 23010 . + 0 ID=cds-HBQ7389028.1;Parent=gene-L8R42_000904;Dbxref=NCBI_GP:HBQ7389028.1;Name=HBQ7389028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463431.1;locus_tag=L8R42_000904;product=DUF1120 domain-containing protein;protein_id=HBQ7389028.1;transl_table=11 DAFVNP010000010.1 tpg gene 23058 23747 . + . ID=gene-L8R42_000905;Name=L8R42_000905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000905 DAFVNP010000010.1 Protein Homology CDS 23058 23747 . + 0 ID=cds-HBQ7389029.1;Parent=gene-L8R42_000905;Dbxref=NCBI_GP:HBQ7389029.1;Name=HBQ7389029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463430.1;locus_tag=L8R42_000905;product=DUF1120 domain-containing protein;protein_id=HBQ7389029.1;transl_table=11 DAFVNP010000010.1 tpg gene 23825 24532 . + . ID=gene-L8R42_000906;Name=L8R42_000906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000906 DAFVNP010000010.1 Protein Homology CDS 23825 24532 . + 0 ID=cds-HBQ7389030.1;Parent=gene-L8R42_000906;Dbxref=NCBI_GP:HBQ7389030.1;Name=HBQ7389030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463429.1;locus_tag=L8R42_000906;product=fimbria/pilus periplasmic chaperone;protein_id=HBQ7389030.1;transl_table=11 DAFVNP010000010.1 tpg gene 24546 26954 . + . ID=gene-L8R42_000907;Name=L8R42_000907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000907 DAFVNP010000010.1 Protein Homology CDS 24546 26954 . + 0 ID=cds-HBQ7389031.1;Parent=gene-L8R42_000907;Dbxref=NCBI_GP:HBQ7389031.1;Name=HBQ7389031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463428.1;locus_tag=L8R42_000907;product=fimbrial biogenesis outer membrane usher protein;protein_id=HBQ7389031.1;transl_table=11 DAFVNP010000010.1 tpg gene 26951 27523 . + . ID=gene-L8R42_000908;Name=L8R42_000908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000908 DAFVNP010000010.1 Protein Homology CDS 26951 27523 . + 0 ID=cds-HBQ7389032.1;Parent=gene-L8R42_000908;Dbxref=NCBI_GP:HBQ7389032.1;Name=HBQ7389032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463427.1;locus_tag=L8R42_000908;product=hypothetical protein;protein_id=HBQ7389032.1;transl_table=11 DAFVNP010000010.1 tpg gene 27561 28280 . - . ID=gene-L8R42_000909;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=L8R42_000909 DAFVNP010000010.1 Protein Homology CDS 27561 28280 . - 0 ID=cds-HBQ7389033.1;Parent=gene-L8R42_000909;Dbxref=NCBI_GP:HBQ7389033.1;Name=HBQ7389033.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=L8R42_000909;product=purine-nucleoside phosphorylase;protein_id=HBQ7389033.1;transl_table=11 DAFVNP010000010.1 tpg gene 28490 29713 . - . ID=gene-L8R42_000910;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=L8R42_000910 DAFVNP010000010.1 Protein Homology CDS 28490 29713 . - 0 ID=cds-HBQ7389034.1;Parent=gene-L8R42_000910;Dbxref=NCBI_GP:HBQ7389034.1;Name=HBQ7389034.1;gbkey=CDS;gene=deoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=L8R42_000910;product=phosphopentomutase;protein_id=HBQ7389034.1;transl_table=11 DAFVNP010000010.1 tpg gene 29765 31087 . - . ID=gene-L8R42_000911;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=L8R42_000911 DAFVNP010000010.1 Protein Homology CDS 29765 31087 . - 0 ID=cds-HBQ7389035.1;Parent=gene-L8R42_000911;Dbxref=NCBI_GP:HBQ7389035.1;Name=HBQ7389035.1;gbkey=CDS;gene=deoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=L8R42_000911;product=thymidine phosphorylase;protein_id=HBQ7389035.1;transl_table=11 DAFVNP010000010.1 tpg gene 31211 31990 . - . ID=gene-L8R42_000912;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=L8R42_000912 DAFVNP010000010.1 Protein Homology CDS 31211 31990 . - 0 ID=cds-HBQ7389036.1;Parent=gene-L8R42_000912;Dbxref=NCBI_GP:HBQ7389036.1;Name=HBQ7389036.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=L8R42_000912;product=deoxyribose-phosphate aldolase;protein_id=HBQ7389036.1;transl_table=11 DAFVNP010000010.1 tpg gene 32250 33800 . + . ID=gene-L8R42_000913;Name=L8R42_000913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000913 DAFVNP010000010.1 Protein Homology CDS 32250 33800 . + 0 ID=cds-HBQ7389037.1;Parent=gene-L8R42_000913;Dbxref=NCBI_GP:HBQ7389037.1;Name=HBQ7389037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=L8R42_000913;product=YjjI family glycine radical enzyme;protein_id=HBQ7389037.1;transl_table=11 DAFVNP010000010.1 tpg gene 33772 34635 . + . ID=gene-L8R42_000914;Name=L8R42_000914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000914 DAFVNP010000010.1 Protein Homology CDS 33772 34635 . + 0 ID=cds-HBQ7389038.1;Parent=gene-L8R42_000914;Dbxref=NCBI_GP:HBQ7389038.1;Name=HBQ7389038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=L8R42_000914;product=YjjW family glycine radical enzyme activase;protein_id=HBQ7389038.1;transl_table=11 DAFVNP010000010.1 tpg gene 34668 35441 . - . ID=gene-L8R42_000915;Name=L8R42_000915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000915 DAFVNP010000010.1 Protein Homology CDS 34668 35441 . - 0 ID=cds-HBQ7389039.1;Parent=gene-L8R42_000915;Dbxref=NCBI_GP:HBQ7389039.1;Name=HBQ7389039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=L8R42_000915;product=metal-dependent hydrolase;protein_id=HBQ7389039.1;transl_table=11 DAFVNP010000010.1 tpg gene 35438 36511 . - . ID=gene-L8R42_000916;Name=L8R42_000916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000916 DAFVNP010000010.1 Protein Homology CDS 35438 36511 . - 0 ID=cds-HBQ7389040.1;Parent=gene-L8R42_000916;Dbxref=NCBI_GP:HBQ7389040.1;Name=HBQ7389040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=L8R42_000916;product=patatin family protein;protein_id=HBQ7389040.1;transl_table=11 DAFVNP010000010.1 tpg gene 36635 36796 . - . ID=gene-L8R42_000917;Name=L8R42_000917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000917 DAFVNP010000010.1 Protein Homology CDS 36635 36796 . - 0 ID=cds-HBQ7389041.1;Parent=gene-L8R42_000917;Dbxref=NCBI_GP:HBQ7389041.1;Name=HBQ7389041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=L8R42_000917;product=DUF1328 domain-containing protein;protein_id=HBQ7389041.1;transl_table=11 DAFVNP010000010.1 tpg gene 36925 37542 . - . ID=gene-L8R42_000918;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=L8R42_000918 DAFVNP010000010.1 Protein Homology CDS 36925 37542 . - 0 ID=cds-HBQ7389042.1;Parent=gene-L8R42_000918;Dbxref=NCBI_GP:HBQ7389042.1;Name=HBQ7389042.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=L8R42_000918;product=molecular chaperone OsmY;protein_id=HBQ7389042.1;transl_table=11 DAFVNP010000010.1 tpg gene 37944 39533 . - . ID=gene-L8R42_000919;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=L8R42_000919 DAFVNP010000010.1 Protein Homology CDS 37944 39533 . - 0 ID=cds-HBQ7389043.1;Parent=gene-L8R42_000919;Dbxref=NCBI_GP:HBQ7389043.1;Name=HBQ7389043.1;gbkey=CDS;gene=prfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=L8R42_000919;product=peptide chain release factor 3;protein_id=HBQ7389043.1;transl_table=11 DAFVNP010000010.1 tpg gene 39625 40302 . - . ID=gene-L8R42_000920;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=L8R42_000920 DAFVNP010000010.1 Protein Homology CDS 39625 40302 . - 0 ID=cds-HBQ7389044.1;Parent=gene-L8R42_000920;Dbxref=NCBI_GP:HBQ7389044.1;Name=HBQ7389044.1;gbkey=CDS;gene=yjjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=L8R42_000920;product=pyrimidine 5'-nucleotidase;protein_id=HBQ7389044.1;transl_table=11 DAFVNP010000010.1 tpg gene 40324 40770 . - . ID=gene-L8R42_000921;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=L8R42_000921 DAFVNP010000010.1 Protein Homology CDS 40324 40770 . - 0 ID=cds-HBQ7389045.1;Parent=gene-L8R42_000921;Dbxref=NCBI_GP:HBQ7389045.1;Name=HBQ7389045.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=L8R42_000921;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=HBQ7389045.1;transl_table=11 DAFVNP010000010.1 tpg gene 40715 41152 . - . ID=gene-L8R42_000922;Name=L8R42_000922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000922 DAFVNP010000010.1 Protein Homology CDS 40715 41152 . - 0 ID=cds-HBQ7389046.1;Parent=gene-L8R42_000922;Dbxref=NCBI_GP:HBQ7389046.1;Name=HBQ7389046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=L8R42_000922;product=DNA polymerase III subunit psi;protein_id=HBQ7389046.1;transl_table=11 DAFVNP010000010.1 tpg gene 41255 42283 . + . ID=gene-L8R42_000923;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=L8R42_000923 DAFVNP010000010.1 Protein Homology CDS 41255 42283 . + 0 ID=cds-HBQ7389047.1;Parent=gene-L8R42_000923;Dbxref=NCBI_GP:HBQ7389047.1;Name=HBQ7389047.1;gbkey=CDS;gene=rsmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=L8R42_000923;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=HBQ7389047.1;transl_table=11 DAFVNP010000010.1 tpg gene 42474 42560 . + . ID=gene-L8R42_000924;Name=L8R42_000924;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_000924 DAFVNP010000010.1 tRNAscan-SE tRNA 42474 42560 . + . ID=rna-L8R42_000924;Parent=gene-L8R42_000924;anticodon=(pos:42508..42510);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000924;product=tRNA-Leu DAFVNP010000010.1 tRNAscan-SE exon 42474 42560 . + . ID=exon-L8R42_000924-1;Parent=rna-L8R42_000924;anticodon=(pos:42508..42510);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_000924;product=tRNA-Leu DAFVNP010000010.1 tpg gene 42592 42828 . - . ID=gene-L8R42_000925;Name=L8R42_000925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000925 DAFVNP010000010.1 Protein Homology CDS 42592 42828 . - 0 ID=cds-HBQ7389048.1;Parent=gene-L8R42_000925;Dbxref=NCBI_GP:HBQ7389048.1;Name=HBQ7389048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=L8R42_000925;product=DUF1435 domain-containing protein;protein_id=HBQ7389048.1;transl_table=11 DAFVNP010000010.1 tpg gene 43079 44143 . + . ID=gene-L8R42_000926;Name=L8R42_000926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000926 DAFVNP010000010.1 Protein Homology CDS 43079 44143 . + 0 ID=cds-HBQ7389049.1;Parent=gene-L8R42_000926;Dbxref=NCBI_GP:HBQ7389049.1;Name=HBQ7389049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=L8R42_000926;product=GGDEF domain-containing protein;protein_id=HBQ7389049.1;transl_table=11 DAFVNP010000010.1 tpg gene 44264 45052 . + . ID=gene-L8R42_000927;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=L8R42_000927 DAFVNP010000010.1 Protein Homology CDS 44264 45052 . + 0 ID=cds-HBQ7389050.1;Parent=gene-L8R42_000927;Dbxref=NCBI_GP:HBQ7389050.1;Name=HBQ7389050.1;gbkey=CDS;gene=fhuF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=L8R42_000927;product=siderophore-iron reductase FhuF;protein_id=HBQ7389050.1;transl_table=11 DAFVNP010000010.1 tpg gene 45203 45661 . + . ID=gene-L8R42_000928;Name=L8R42_000928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000928 DAFVNP010000010.1 Protein Homology CDS 45203 45661 . + 0 ID=cds-HBQ7389051.1;Parent=gene-L8R42_000928;Dbxref=NCBI_GP:HBQ7389051.1;Name=HBQ7389051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=L8R42_000928;product=YbaK/EbsC family protein;protein_id=HBQ7389051.1;transl_table=11 DAFVNP010000010.1 tpg gene 45712 46386 . - . ID=gene-L8R42_000929;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=L8R42_000929 DAFVNP010000010.1 Protein Homology CDS 45712 46386 . - 0 ID=cds-HBQ7389052.1;Parent=gene-L8R42_000929;Dbxref=NCBI_GP:HBQ7389052.1;Name=HBQ7389052.1;gbkey=CDS;gene=bglJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=L8R42_000929;product=DNA-binding transcriptional activator BglJ;protein_id=HBQ7389052.1;transl_table=11 DAFVNP010000010.1 tpg gene 46347 47072 . - . ID=gene-L8R42_000930;Name=L8R42_000930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000930 DAFVNP010000010.1 Protein Homology CDS 46347 47072 . - 0 ID=cds-HBQ7389053.1;Parent=gene-L8R42_000930;Dbxref=NCBI_GP:HBQ7389053.1;Name=HBQ7389053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=L8R42_000930;product=response regulator transcription factor;protein_id=HBQ7389053.1;transl_table=11 DAFVNP010000010.1 tpg gene 47785 48561 . + . ID=gene-L8R42_000931;Name=L8R42_000931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000931 DAFVNP010000010.1 Protein Homology CDS 47785 48561 . + 0 ID=cds-HBQ7389054.1;Parent=gene-L8R42_000931;Dbxref=NCBI_GP:HBQ7389054.1;Name=HBQ7389054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=L8R42_000931;product=threonine/serine exporter ThrE family protein;protein_id=HBQ7389054.1;transl_table=11 DAFVNP010000010.1 tpg gene 48552 49025 . + . ID=gene-L8R42_000932;Name=L8R42_000932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000932 DAFVNP010000010.1 Protein Homology CDS 48552 49025 . + 0 ID=cds-HBQ7389055.1;Parent=gene-L8R42_000932;Dbxref=NCBI_GP:HBQ7389055.1;Name=HBQ7389055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=L8R42_000932;product=threonine/serine exporter;protein_id=HBQ7389055.1;transl_table=11 DAFVNP010000010.1 tpg gene 49118 49657 . + . ID=gene-L8R42_000933;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=L8R42_000933 DAFVNP010000010.1 Protein Homology CDS 49118 49657 . + 0 ID=cds-HBQ7389056.1;Parent=gene-L8R42_000933;Dbxref=NCBI_GP:HBQ7389056.1;Name=HBQ7389056.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=L8R42_000933;product=primosomal protein DnaT;protein_id=HBQ7389056.1;transl_table=11 DAFVNP010000010.1 tpg gene 49660 50397 . + . ID=gene-L8R42_000934;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=L8R42_000934 DAFVNP010000010.1 Protein Homology CDS 49660 50397 . + 0 ID=cds-HBQ7389057.1;Parent=gene-L8R42_000934;Dbxref=NCBI_GP:HBQ7389057.1;Name=HBQ7389057.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=L8R42_000934;product=DNA replication protein DnaC;protein_id=HBQ7389057.1;transl_table=11 DAFVNP010000010.1 tpg gene 50455 50916 . + . ID=gene-L8R42_000935;Name=L8R42_000935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000935 DAFVNP010000010.1 Protein Homology CDS 50455 50916 . + 0 ID=cds-HBQ7389058.1;Parent=gene-L8R42_000935;Dbxref=NCBI_GP:HBQ7389058.1;Name=HBQ7389058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=L8R42_000935;product=DUF2501 domain-containing protein;protein_id=HBQ7389058.1;transl_table=11 DAFVNP010000010.1 tpg gene 51199 53490 . + . ID=gene-L8R42_000936;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=L8R42_000936 DAFVNP010000010.1 Protein Homology CDS 51199 53490 . + 0 ID=cds-HBQ7389059.1;Parent=gene-L8R42_000936;Dbxref=NCBI_GP:HBQ7389059.1;Name=HBQ7389059.1;gbkey=CDS;gene=opgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=L8R42_000936;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=HBQ7389059.1;transl_table=11 DAFVNP010000010.1 tpg gene 53624 54634 . - . ID=gene-L8R42_000937;Name=L8R42_000937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000937 DAFVNP010000010.1 Protein Homology CDS 53624 54634 . - 0 ID=cds-HBQ7389060.1;Parent=gene-L8R42_000937;Dbxref=NCBI_GP:HBQ7389060.1;Name=HBQ7389060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=L8R42_000937;product=SIS domain-containing protein;protein_id=HBQ7389060.1;transl_table=11 DAFVNP010000010.1 tpg gene 54652 55713 . - . ID=gene-L8R42_000938;Name=L8R42_000938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000938 DAFVNP010000010.1 Protein Homology CDS 54652 55713 . - 0 ID=cds-HBQ7389061.1;Parent=gene-L8R42_000938;Dbxref=NCBI_GP:HBQ7389061.1;Name=HBQ7389061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=L8R42_000938;product=SIS domain-containing protein;protein_id=HBQ7389061.1;transl_table=11 DAFVNP010000010.1 tpg gene 55726 56574 . - . ID=gene-L8R42_000939;Name=L8R42_000939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000939 DAFVNP010000010.1 Protein Homology CDS 55726 56574 . - 0 ID=cds-HBQ7389062.1;Parent=gene-L8R42_000939;Dbxref=NCBI_GP:HBQ7389062.1;Name=HBQ7389062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=L8R42_000939;product=PTS mannose/fructose/sorbose transporter family subunit IID;protein_id=HBQ7389062.1;transl_table=11 DAFVNP010000010.1 tpg gene 56552 57331 . - . ID=gene-L8R42_000940;Name=L8R42_000940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000940 DAFVNP010000010.1 Protein Homology CDS 56552 57331 . - 0 ID=cds-HBQ7389063.1;Parent=gene-L8R42_000940;Dbxref=NCBI_GP:HBQ7389063.1;Name=HBQ7389063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=L8R42_000940;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=HBQ7389063.1;transl_table=11 DAFVNP010000010.1 tpg gene 57357 57818 . - . ID=gene-L8R42_000941;Name=L8R42_000941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000941 DAFVNP010000010.1 Protein Homology CDS 57357 57818 . - 0 ID=cds-HBQ7389064.1;Parent=gene-L8R42_000941;Dbxref=NCBI_GP:HBQ7389064.1;Name=HBQ7389064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=L8R42_000941;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=HBQ7389064.1;transl_table=11 DAFVNP010000010.1 tpg gene 57833 58255 . - . ID=gene-L8R42_000942;Name=L8R42_000942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000942 DAFVNP010000010.1 Protein Homology CDS 57833 58255 . - 0 ID=cds-HBQ7389065.1;Parent=gene-L8R42_000942;Dbxref=NCBI_GP:HBQ7389065.1;Name=HBQ7389065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=L8R42_000942;product=PTS sugar transporter subunit IIA;protein_id=HBQ7389065.1;transl_table=11 DAFVNP010000010.1 tpg gene 58357 61122 . - . ID=gene-L8R42_000943;Name=L8R42_000943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000943 DAFVNP010000010.1 Protein Homology CDS 58357 61122 . - 0 ID=cds-HBQ7389066.1;Parent=gene-L8R42_000943;Dbxref=NCBI_GP:HBQ7389066.1;Name=HBQ7389066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=L8R42_000943;product=sigma-54-dependent transcriptional regulator;protein_id=HBQ7389066.1;transl_table=11 DAFVNP010000010.1 tpg gene 61445 63106 . - . ID=gene-L8R42_000944;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=L8R42_000944 DAFVNP010000010.1 Protein Homology CDS 61445 63106 . - 0 ID=cds-HBQ7389067.1;Parent=gene-L8R42_000944;Dbxref=NCBI_GP:HBQ7389067.1;Name=HBQ7389067.1;gbkey=CDS;gene=tsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=L8R42_000944;product=methyl-accepting chemotaxis protein;protein_id=HBQ7389067.1;transl_table=11 DAFVNP010000010.1 tpg gene 63473 65623 . + . ID=gene-L8R42_000945;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=L8R42_000945 DAFVNP010000010.1 Protein Homology CDS 63473 65623 . + 0 ID=cds-HBQ7389068.1;Parent=gene-L8R42_000945;Dbxref=NCBI_GP:HBQ7389068.1;Name=HBQ7389068.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=L8R42_000945;product=pyruvate/proton symporter BtsT;protein_id=HBQ7389068.1;transl_table=11 DAFVNP010000010.1 tpg gene 65718 65921 . + . ID=gene-L8R42_000946;Name=L8R42_000946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000946 DAFVNP010000010.1 Protein Homology CDS 65718 65921 . + 0 ID=cds-HBQ7389069.1;Parent=gene-L8R42_000946;Dbxref=NCBI_GP:HBQ7389069.1;Name=HBQ7389069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=L8R42_000946;product=YbdD/YjiX family protein;protein_id=HBQ7389069.1;transl_table=11 DAFVNP010000010.1 tpg gene 65932 66888 . + . ID=gene-L8R42_000947;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=L8R42_000947 DAFVNP010000010.1 Protein Homology CDS 65932 66888 . + 0 ID=cds-HBQ7389070.1;Parent=gene-L8R42_000947;Dbxref=NCBI_GP:HBQ7389070.1;Name=HBQ7389070.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=L8R42_000947;product=GTPase;protein_id=HBQ7389070.1;transl_table=11 DAFVNP010000010.1 tpg gene 67004 67972 . - . ID=gene-L8R42_000948;Name=L8R42_000948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000948 DAFVNP010000010.1 Protein Homology CDS 67004 67972 . - 0 ID=cds-HBQ7389071.1;Parent=gene-L8R42_000948;Dbxref=NCBI_GP:HBQ7389071.1;Name=HBQ7389071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=L8R42_000948;product=hypothetical protein;protein_id=HBQ7389071.1;transl_table=11 DAFVNP010000010.1 tpg gene 68114 70525 . + . ID=gene-L8R42_000949;Name=L8R42_000949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000949 DAFVNP010000010.1 Protein Homology CDS 68114 70525 . + 0 ID=cds-HBQ7389072.1;Parent=gene-L8R42_000949;Dbxref=NCBI_GP:HBQ7389072.1;Name=HBQ7389072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=L8R42_000949;product=DEAD/DEAH box helicase family protein;protein_id=HBQ7389072.1;transl_table=11 DAFVNP010000010.1 tpg gene 70596 72065 . + . ID=gene-L8R42_000950;Name=L8R42_000950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000950 DAFVNP010000010.1 Protein Homology CDS 70596 72065 . + 0 ID=cds-HBQ7389073.1;Parent=gene-L8R42_000950;Dbxref=NCBI_GP:HBQ7389073.1;Name=HBQ7389073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028345.1;locus_tag=L8R42_000950;product=N-6 DNA methylase;protein_id=HBQ7389073.1;transl_table=11 DAFVNP010000010.1 tpg gene 72065 73837 . + . ID=gene-L8R42_000951;Name=L8R42_000951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000951 DAFVNP010000010.1 Protein Homology CDS 72065 73837 . + 0 ID=cds-HBQ7389074.1;Parent=gene-L8R42_000951;Dbxref=NCBI_GP:HBQ7389074.1;Name=HBQ7389074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110084.1;locus_tag=L8R42_000951;product=restriction endonuclease subunit S;protein_id=HBQ7389074.1;transl_table=11 DAFVNP010000010.1 tpg gene 74054 74374 . + . ID=gene-L8R42_000952;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=L8R42_000952 DAFVNP010000010.1 Protein Homology CDS 74054 74374 . + 0 ID=cds-HBQ7389075.1;Parent=gene-L8R42_000952;Dbxref=NCBI_GP:HBQ7389075.1;Name=HBQ7389075.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551937.1;locus_tag=L8R42_000952;product=endoribonuclease SymE;protein_id=HBQ7389075.1;transl_table=11 DAFVNP010000010.1 tpg gene 74419 76272 . - . ID=gene-L8R42_000953;Name=L8R42_000953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000953 DAFVNP010000010.1 Protein Homology CDS 74419 76272 . - 0 ID=cds-HBQ7389076.1;Parent=gene-L8R42_000953;Dbxref=NCBI_GP:HBQ7389076.1;Name=HBQ7389076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102841.1;locus_tag=L8R42_000953;product=DUF262 domain-containing protein;protein_id=HBQ7389076.1;transl_table=11 DAFVNP010000010.1 tpg gene 76408 77328 . + . ID=gene-L8R42_000954;Name=L8R42_000954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000954 DAFVNP010000010.1 Protein Homology CDS 76408 77328 . + 0 ID=cds-HBQ7389077.1;Parent=gene-L8R42_000954;Dbxref=NCBI_GP:HBQ7389077.1;Name=HBQ7389077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=L8R42_000954;product=DUF91 domain-containing protein;protein_id=HBQ7389077.1;transl_table=11 DAFVNP010000010.1 tpg gene 77405 77569 . - . ID=gene-L8R42_000955;Name=L8R42_000955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000955 DAFVNP010000010.1 Protein Homology CDS 77405 77569 . - 0 ID=cds-HBQ7389078.1;Parent=gene-L8R42_000955;Dbxref=NCBI_GP:HBQ7389078.1;Name=HBQ7389078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=L8R42_000955;product=DUF1127 domain-containing protein;protein_id=HBQ7389078.1;transl_table=11 DAFVNP010000010.1 tpg gene 77536 77679 . + . ID=gene-L8R42_000956;Name=L8R42_000956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000956 DAFVNP010000010.1 Protein Homology CDS 77536 77679 . + 0 ID=cds-HBQ7389079.1;Parent=gene-L8R42_000956;Dbxref=NCBI_GP:HBQ7389079.1;Name=HBQ7389079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=L8R42_000956;product=hypothetical protein;protein_id=HBQ7389079.1;transl_table=11 DAFVNP010000010.1 tpg gene 77774 79144 . - . ID=gene-L8R42_000957;Name=L8R42_000957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000957 DAFVNP010000010.1 Protein Homology CDS 77774 79144 . - 0 ID=cds-HBQ7389080.1;Parent=gene-L8R42_000957;Dbxref=NCBI_GP:HBQ7389080.1;Name=HBQ7389080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=L8R42_000957;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=HBQ7389080.1;transl_table=11 DAFVNP010000010.1 tpg gene 79325 80278 . - . ID=gene-L8R42_000958;Name=L8R42_000958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000958 DAFVNP010000010.1 Protein Homology CDS 79325 80278 . - 0 ID=cds-HBQ7389081.1;Parent=gene-L8R42_000958;Dbxref=NCBI_GP:HBQ7389081.1;Name=HBQ7389081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=L8R42_000958;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HBQ7389081.1;transl_table=11 DAFVNP010000010.1 tpg gene 80757 80962 . + . ID=gene-L8R42_000959;Name=L8R42_000959;end_range=80962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000959;partial=true DAFVNP010000010.1 Protein Homology CDS 80757 80962 . + 0 ID=cds-HBQ7389082.1;Parent=gene-L8R42_000959;Dbxref=NCBI_GP:HBQ7389082.1;Name=HBQ7389082.1;Note=is involved in resistance to acriflavine%2C chloramphenicol%2C norfloxacin%2C ethidium bromide and TPP;end_range=80962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=L8R42_000959;partial=true;product=MFS transporter;protein_id=HBQ7389082.1;transl_table=11 ##sequence-region DAFVNP010000011.1 1 80492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000011.1 tpg region 1 80492 . + . ID=DAFVNP010000011.1:1..80492;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000011.1 tpg gene 323 778 . + . ID=gene-L8R42_000960;Name=L8R42_000960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000960 DAFVNP010000011.1 Protein Homology CDS 323 778 . + 0 ID=cds-HBQ7389083.1;Parent=gene-L8R42_000960;Dbxref=NCBI_GP:HBQ7389083.1;Name=HBQ7389083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=L8R42_000960;product=DUF4385 domain-containing protein;protein_id=HBQ7389083.1;transl_table=11 DAFVNP010000011.1 tpg gene 882 2183 . + . ID=gene-L8R42_000961;Name=L8R42_000961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000961 DAFVNP010000011.1 Protein Homology CDS 882 2183 . + 0 ID=cds-HBQ7389084.1;Parent=gene-L8R42_000961;Dbxref=NCBI_GP:HBQ7389084.1;Name=HBQ7389084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=L8R42_000961;product=MFS transporter;protein_id=HBQ7389084.1;transl_table=11 DAFVNP010000011.1 tpg gene 2180 2503 . - . ID=gene-L8R42_000962;Name=L8R42_000962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000962 DAFVNP010000011.1 Protein Homology CDS 2180 2503 . - 0 ID=cds-HBQ7389085.1;Parent=gene-L8R42_000962;Dbxref=NCBI_GP:HBQ7389085.1;Name=HBQ7389085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=L8R42_000962;product=YfiM family lipoprotein;protein_id=HBQ7389085.1;transl_table=11 DAFVNP010000011.1 tpg gene 2548 3903 . - . ID=gene-L8R42_000963;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=L8R42_000963 DAFVNP010000011.1 Protein Homology CDS 2548 3903 . - 0 ID=cds-HBQ7389086.1;Parent=gene-L8R42_000963;Dbxref=NCBI_GP:HBQ7389086.1;Name=HBQ7389086.1;gbkey=CDS;gene=pssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=L8R42_000963;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=HBQ7389086.1;transl_table=11 DAFVNP010000011.1 tpg gene 4018 6678 . - . ID=gene-L8R42_000964;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=L8R42_000964 DAFVNP010000011.1 Protein Homology CDS 4018 6678 . - 0 ID=cds-HBQ7389087.1;Parent=gene-L8R42_000964;Dbxref=NCBI_GP:HBQ7389087.1;Name=HBQ7389087.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=L8R42_000964;product=protein lysine acetyltransferase;protein_id=HBQ7389087.1;transl_table=11 DAFVNP010000011.1 tpg gene 6732 7412 . - . ID=gene-L8R42_000965;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=L8R42_000965 DAFVNP010000011.1 Protein Homology CDS 6732 7412 . - 0 ID=cds-HBQ7389088.1;Parent=gene-L8R42_000965;Dbxref=NCBI_GP:HBQ7389088.1;Name=HBQ7389088.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=L8R42_000965;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=HBQ7389088.1;transl_table=11 DAFVNP010000011.1 tpg gene 7485 7904 . - . ID=gene-L8R42_000966;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=L8R42_000966 DAFVNP010000011.1 Protein Homology CDS 7485 7904 . - 0 ID=cds-HBQ7389089.1;Parent=gene-L8R42_000966;Dbxref=NCBI_GP:HBQ7389089.1;Name=HBQ7389089.1;gbkey=CDS;gene=trxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=L8R42_000966;product=thioredoxin TrxC;protein_id=HBQ7389089.1;transl_table=11 DAFVNP010000011.1 tpg gene 8108 9145 . + . ID=gene-L8R42_000967;Name=L8R42_000967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000967 DAFVNP010000011.1 Protein Homology CDS 8108 9145 . + 0 ID=cds-HBQ7389090.1;Parent=gene-L8R42_000967;Dbxref=NCBI_GP:HBQ7389090.1;Name=HBQ7389090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=L8R42_000967;product=tRNA/rRNA methyltransferase;protein_id=HBQ7389090.1;transl_table=11 DAFVNP010000011.1 tpg gene 9261 9950 . - . ID=gene-L8R42_000968;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=L8R42_000968 DAFVNP010000011.1 Protein Homology CDS 9261 9950 . - 0 ID=cds-HBQ7389091.1;Parent=gene-L8R42_000968;Dbxref=NCBI_GP:HBQ7389091.1;Name=HBQ7389091.1;gbkey=CDS;gene=ung;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=L8R42_000968;product=uracil-DNA glycosylase;protein_id=HBQ7389091.1;transl_table=11 DAFVNP010000011.1 tpg gene 10269 10652 . + . ID=gene-L8R42_000969;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=L8R42_000969 DAFVNP010000011.1 Protein Homology CDS 10269 10652 . + 0 ID=cds-HBQ7389092.1;Parent=gene-L8R42_000969;Dbxref=NCBI_GP:HBQ7389092.1;Name=HBQ7389092.1;gbkey=CDS;gene=grcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=L8R42_000969;product=autonomous glycyl radical cofactor GrcA;protein_id=HBQ7389092.1;transl_table=11 DAFVNP010000011.1 tpg gene 10714 11301 . - . ID=gene-L8R42_000970;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=L8R42_000970 DAFVNP010000011.1 Protein Homology CDS 10714 11301 . - 0 ID=cds-HBQ7389093.1;Parent=gene-L8R42_000970;Dbxref=NCBI_GP:HBQ7389093.1;Name=HBQ7389093.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=L8R42_000970;product=cysteine/O-acetylserine transporter;protein_id=HBQ7389093.1;transl_table=11 DAFVNP010000011.1 tpg gene 11404 12303 . + . ID=gene-L8R42_000971;Name=L8R42_000971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000971 DAFVNP010000011.1 Protein Homology CDS 11404 12303 . + 0 ID=cds-HBQ7389094.1;Parent=gene-L8R42_000971;Dbxref=NCBI_GP:HBQ7389094.1;Name=HBQ7389094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=L8R42_000971;product=LysR family transcriptional regulator;protein_id=HBQ7389094.1;transl_table=11 DAFVNP010000011.1 tpg gene 12321 13655 . - . ID=gene-L8R42_000972;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=L8R42_000972 DAFVNP010000011.1 Protein Homology CDS 12321 13655 . - 0 ID=cds-HBQ7389095.1;Parent=gene-L8R42_000972;Dbxref=NCBI_GP:HBQ7389095.1;Name=HBQ7389095.1;gbkey=CDS;gene=srmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=L8R42_000972;product=ATP-dependent RNA helicase SrmB;protein_id=HBQ7389095.1;transl_table=11 DAFVNP010000011.1 tpg gene 13786 14523 . + . ID=gene-L8R42_000973;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=L8R42_000973 DAFVNP010000011.1 Protein Homology CDS 13786 14523 . + 0 ID=cds-HBQ7389096.1;Parent=gene-L8R42_000973;Dbxref=NCBI_GP:HBQ7389096.1;Name=HBQ7389096.1;gbkey=CDS;gene=trmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=L8R42_000973;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=HBQ7389096.1;transl_table=11 DAFVNP010000011.1 tpg gene 14508 16130 . - . ID=gene-L8R42_000974;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=L8R42_000974 DAFVNP010000011.1 Protein Homology CDS 14508 16130 . - 0 ID=cds-HBQ7389097.1;Parent=gene-L8R42_000974;Dbxref=NCBI_GP:HBQ7389097.1;Name=HBQ7389097.1;gbkey=CDS;gene=nadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=L8R42_000974;product=L-aspartate oxidase;protein_id=HBQ7389097.1;transl_table=11 DAFVNP010000011.1 tpg gene 16394 16558 . + . ID=gene-L8R42_000975;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=L8R42_000975 DAFVNP010000011.1 Protein Homology CDS 16394 16558 . + 0 ID=cds-HBQ7389098.1;Parent=gene-L8R42_000975;Dbxref=NCBI_GP:HBQ7389098.1;Name=HBQ7389098.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=L8R42_000975;product=rpoE leader peptide RseD;protein_id=HBQ7389098.1;transl_table=11 DAFVNP010000011.1 tpg gene 16555 17130 . + . ID=gene-L8R42_000976;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=L8R42_000976 DAFVNP010000011.1 Protein Homology CDS 16555 17130 . + 0 ID=cds-HBQ7389099.1;Parent=gene-L8R42_000976;Dbxref=NCBI_GP:HBQ7389099.1;Name=HBQ7389099.1;gbkey=CDS;gene=rpoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=L8R42_000976;product=RNA polymerase sigma factor RpoE;protein_id=HBQ7389099.1;transl_table=11 DAFVNP010000011.1 tpg gene 17162 17812 . + . ID=gene-L8R42_000977;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=L8R42_000977 DAFVNP010000011.1 Protein Homology CDS 17162 17812 . + 0 ID=cds-HBQ7389100.1;Parent=gene-L8R42_000977;Dbxref=NCBI_GP:HBQ7389100.1;Name=HBQ7389100.1;gbkey=CDS;gene=rseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=L8R42_000977;product=anti-sigma-E factor RseA;protein_id=HBQ7389100.1;transl_table=11 DAFVNP010000011.1 tpg gene 17812 18768 . + . ID=gene-L8R42_000978;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=L8R42_000978 DAFVNP010000011.1 Protein Homology CDS 17812 18768 . + 0 ID=cds-HBQ7389101.1;Parent=gene-L8R42_000978;Dbxref=NCBI_GP:HBQ7389101.1;Name=HBQ7389101.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=L8R42_000978;product=sigma-E factor regulatory protein RseB;protein_id=HBQ7389101.1;transl_table=11 DAFVNP010000011.1 tpg gene 18765 19244 . + . ID=gene-L8R42_000979;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=L8R42_000979 DAFVNP010000011.1 Protein Homology CDS 18765 19244 . + 0 ID=cds-HBQ7389102.1;Parent=gene-L8R42_000979;Dbxref=NCBI_GP:HBQ7389102.1;Name=HBQ7389102.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=L8R42_000979;product=SoxR-reducing system protein RseC;protein_id=HBQ7389102.1;transl_table=11 DAFVNP010000011.1 tpg gene 19495 21294 . + . ID=gene-L8R42_000980;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=L8R42_000980 DAFVNP010000011.1 Protein Homology CDS 19495 21294 . + 0 ID=cds-HBQ7389103.1;Parent=gene-L8R42_000980;Dbxref=NCBI_GP:HBQ7389103.1;Name=HBQ7389103.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=L8R42_000980;product=elongation factor 4;protein_id=HBQ7389103.1;transl_table=11 DAFVNP010000011.1 tpg gene 21311 22285 . + . ID=gene-L8R42_000981;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=L8R42_000981 DAFVNP010000011.1 Protein Homology CDS 21311 22285 . + 0 ID=cds-HBQ7389104.1;Parent=gene-L8R42_000981;Dbxref=NCBI_GP:HBQ7389104.1;Name=HBQ7389104.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=L8R42_000981;product=signal peptidase I;protein_id=HBQ7389104.1;transl_table=11 DAFVNP010000011.1 tpg gene 22559 23239 . + . ID=gene-L8R42_000982;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=L8R42_000982 DAFVNP010000011.1 Protein Homology CDS 22559 23239 . + 0 ID=cds-HBQ7389105.1;Parent=gene-L8R42_000982;Dbxref=NCBI_GP:HBQ7389105.1;Name=HBQ7389105.1;gbkey=CDS;gene=rnc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248457.1;locus_tag=L8R42_000982;product=ribonuclease III;protein_id=HBQ7389105.1;transl_table=11 DAFVNP010000011.1 tpg gene 23236 24141 . + . ID=gene-L8R42_000983;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=L8R42_000983 DAFVNP010000011.1 Protein Homology CDS 23236 24141 . + 0 ID=cds-HBQ7389106.1;Parent=gene-L8R42_000983;Dbxref=NCBI_GP:HBQ7389106.1;Name=HBQ7389106.1;gbkey=CDS;gene=era;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=L8R42_000983;product=GTPase Era;protein_id=HBQ7389106.1;transl_table=11 DAFVNP010000011.1 tpg gene 24153 24881 . + . ID=gene-L8R42_000984;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=L8R42_000984 DAFVNP010000011.1 Protein Homology CDS 24153 24881 . + 0 ID=cds-HBQ7389107.1;Parent=gene-L8R42_000984;Dbxref=NCBI_GP:HBQ7389107.1;Name=HBQ7389107.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=L8R42_000984;product=DNA repair protein RecO;protein_id=HBQ7389107.1;transl_table=11 DAFVNP010000011.1 tpg gene 24893 25624 . + . ID=gene-L8R42_000985;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=L8R42_000985 DAFVNP010000011.1 Protein Homology CDS 24893 25624 . + 0 ID=cds-HBQ7389108.1;Parent=gene-L8R42_000985;Dbxref=NCBI_GP:HBQ7389108.1;Name=HBQ7389108.1;gbkey=CDS;gene=pdxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=L8R42_000985;product=pyridoxine 5'-phosphate synthase;protein_id=HBQ7389108.1;transl_table=11 DAFVNP010000011.1 tpg gene 25624 26004 . + . ID=gene-L8R42_000986;Name=L8R42_000986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000986 DAFVNP010000011.1 Protein Homology CDS 25624 26004 . + 0 ID=cds-HBQ7389109.1;Parent=gene-L8R42_000986;Dbxref=NCBI_GP:HBQ7389109.1;Name=HBQ7389109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=L8R42_000986;product=holo-ACP synthase;protein_id=HBQ7389109.1;transl_table=11 DAFVNP010000011.1 tpg gene 26116 26376 . - . ID=gene-L8R42_000987;Name=L8R42_000987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000987 DAFVNP010000011.1 Protein Homology CDS 26116 26376 . - 0 ID=cds-HBQ7389110.1;Parent=gene-L8R42_000987;Dbxref=NCBI_GP:HBQ7389110.1;Name=HBQ7389110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=L8R42_000987;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=HBQ7389110.1;transl_table=11 DAFVNP010000011.1 tpg gene 26414 27340 . - . ID=gene-L8R42_000988;Name=L8R42_000988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000988 DAFVNP010000011.1 Protein Homology CDS 26414 27340 . - 0 ID=cds-HBQ7389111.1;Parent=gene-L8R42_000988;Dbxref=NCBI_GP:HBQ7389111.1;Name=HBQ7389111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=L8R42_000988;product=LysR family transcriptional regulator;protein_id=HBQ7389111.1;transl_table=11 DAFVNP010000011.1 tpg gene 27456 28652 . + . ID=gene-L8R42_000989;Name=L8R42_000989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000989 DAFVNP010000011.1 Protein Homology CDS 27456 28652 . + 0 ID=cds-HBQ7389112.1;Parent=gene-L8R42_000989;Dbxref=NCBI_GP:HBQ7389112.1;Name=HBQ7389112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=L8R42_000989;product=OFA family MFS transporter;protein_id=HBQ7389112.1;transl_table=11 DAFVNP010000011.1 tpg gene 28674 29591 . + . ID=gene-L8R42_000990;Name=L8R42_000990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000990 DAFVNP010000011.1 Protein Homology CDS 28674 29591 . + 0 ID=cds-HBQ7389113.1;Parent=gene-L8R42_000990;Dbxref=NCBI_GP:HBQ7389113.1;Name=HBQ7389113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=L8R42_000990;product=oxidoreductase;protein_id=HBQ7389113.1;transl_table=11 DAFVNP010000011.1 tpg gene 29630 30478 . - . ID=gene-L8R42_000991;Name=L8R42_000991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000991 DAFVNP010000011.1 Protein Homology CDS 29630 30478 . - 0 ID=cds-HBQ7389114.1;Parent=gene-L8R42_000991;Dbxref=NCBI_GP:HBQ7389114.1;Name=HBQ7389114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=L8R42_000991;product=MurR/RpiR family transcriptional regulator;protein_id=HBQ7389114.1;transl_table=11 DAFVNP010000011.1 tpg gene 30594 31487 . + . ID=gene-L8R42_000992;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=L8R42_000992 DAFVNP010000011.1 Protein Homology CDS 30594 31487 . + 0 ID=cds-HBQ7389115.1;Parent=gene-L8R42_000992;Dbxref=NCBI_GP:HBQ7389115.1;Name=HBQ7389115.1;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=L8R42_000992;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=HBQ7389115.1;transl_table=11 DAFVNP010000011.1 tpg gene 31498 32859 . + . ID=gene-L8R42_000993;Name=L8R42_000993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000993 DAFVNP010000011.1 Protein Homology CDS 31498 32859 . + 0 ID=cds-HBQ7389116.1;Parent=gene-L8R42_000993;Dbxref=NCBI_GP:HBQ7389116.1;Name=HBQ7389116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=L8R42_000993;product=PTS transporter subunit EIIC;protein_id=HBQ7389116.1;transl_table=11 DAFVNP010000011.1 tpg gene 32863 33498 . + . ID=gene-L8R42_000994;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=L8R42_000994 DAFVNP010000011.1 Protein Homology CDS 32863 33498 . + 0 ID=cds-HBQ7389117.1;Parent=gene-L8R42_000994;Dbxref=NCBI_GP:HBQ7389117.1;Name=HBQ7389117.1;gbkey=CDS;gene=yfhb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=L8R42_000994;product=phosphatidylglycerophosphatase C;protein_id=HBQ7389117.1;transl_table=11 DAFVNP010000011.1 tpg gene 33523 34074 . + . ID=gene-L8R42_000995;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=L8R42_000995 DAFVNP010000011.1 Protein Homology CDS 33523 34074 . + 0 ID=cds-HBQ7389118.1;Parent=gene-L8R42_000995;Dbxref=NCBI_GP:HBQ7389118.1;Name=HBQ7389118.1;gbkey=CDS;gene=tadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=L8R42_000995;product=tRNA adenosine(34) deaminase TadA;protein_id=HBQ7389118.1;transl_table=11 DAFVNP010000011.1 tpg gene 34125 35669 . - . ID=gene-L8R42_000996;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=L8R42_000996 DAFVNP010000011.1 Protein Homology CDS 34125 35669 . - 0 ID=cds-HBQ7389119.1;Parent=gene-L8R42_000996;Dbxref=NCBI_GP:HBQ7389119.1;Name=HBQ7389119.1;gbkey=CDS;gene=mltF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=L8R42_000996;product=membrane-bound lytic murein transglycosylase MltF;protein_id=HBQ7389119.1;transl_table=11 DAFVNP010000011.1 tpg gene 35670 35897 . - . ID=gene-L8R42_000997;Name=L8R42_000997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_000997 DAFVNP010000011.1 Protein Homology CDS 35670 35897 . - 0 ID=cds-HBQ7389120.1;Parent=gene-L8R42_000997;Dbxref=NCBI_GP:HBQ7389120.1;Name=HBQ7389120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=L8R42_000997;product=hypothetical protein;protein_id=HBQ7389120.1;transl_table=11 DAFVNP010000011.1 tpg gene 35924 39811 . + . ID=gene-L8R42_000998;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=L8R42_000998 DAFVNP010000011.1 Protein Homology CDS 35924 39811 . + 0 ID=cds-HBQ7389121.1;Parent=gene-L8R42_000998;Dbxref=NCBI_GP:HBQ7389121.1;Name=HBQ7389121.1;gbkey=CDS;gene=purL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=L8R42_000998;product=phosphoribosylformylglycinamidine synthase;protein_id=HBQ7389121.1;transl_table=11 DAFVNP010000011.1 tpg gene 40316 41746 . + . ID=gene-L8R42_000999;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=L8R42_000999 DAFVNP010000011.1 Protein Homology CDS 40316 41746 . + 0 ID=cds-HBQ7389122.1;Parent=gene-L8R42_000999;Dbxref=NCBI_GP:HBQ7389122.1;Name=HBQ7389122.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=L8R42_000999;product=two component system sensor histidine kinase QseE/GlrK;protein_id=HBQ7389122.1;transl_table=11 DAFVNP010000011.1 tpg gene 41748 42512 . + . ID=gene-L8R42_001000;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=L8R42_001000 DAFVNP010000011.1 Protein Homology CDS 41748 42512 . + 0 ID=cds-HBQ7389123.1;Parent=gene-L8R42_001000;Dbxref=NCBI_GP:HBQ7389123.1;Name=HBQ7389123.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=L8R42_001000;product=two-component system QseEF-associated lipoprotein QseG;protein_id=HBQ7389123.1;transl_table=11 DAFVNP010000011.1 tpg gene 42509 43846 . + . ID=gene-L8R42_001001;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=L8R42_001001 DAFVNP010000011.1 Protein Homology CDS 42509 43846 . + 0 ID=cds-HBQ7389124.1;Parent=gene-L8R42_001001;Dbxref=NCBI_GP:HBQ7389124.1;Name=HBQ7389124.1;gbkey=CDS;gene=glrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=L8R42_001001;product=two-component system response regulator GlrR;protein_id=HBQ7389124.1;transl_table=11 DAFVNP010000011.1 tpg gene 43923 44261 . + . ID=gene-L8R42_001002;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=L8R42_001002 DAFVNP010000011.1 Protein Homology CDS 43923 44261 . + 0 ID=cds-HBQ7389125.1;Parent=gene-L8R42_001002;Dbxref=NCBI_GP:HBQ7389125.1;Name=HBQ7389125.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=L8R42_001002;product=nitrogen regulatory protein P-II;protein_id=HBQ7389125.1;transl_table=11 DAFVNP010000011.1 tpg gene 44310 45770 . - . ID=gene-L8R42_001003;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=L8R42_001003 DAFVNP010000011.1 Protein Homology CDS 44310 45770 . - 0 ID=cds-HBQ7389126.1;Parent=gene-L8R42_001003;Dbxref=NCBI_GP:HBQ7389126.1;Name=HBQ7389126.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=L8R42_001003;product=dipeptide permease DtpD;protein_id=HBQ7389126.1;transl_table=11 DAFVNP010000011.1 tpg gene 45826 47970 . - . ID=gene-L8R42_001004;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=L8R42_001004 DAFVNP010000011.1 Protein Homology CDS 45826 47970 . - 0 ID=cds-HBQ7389127.1;Parent=gene-L8R42_001004;Dbxref=NCBI_GP:HBQ7389127.1;Name=HBQ7389127.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=L8R42_001004;product=lysine decarboxylase CadA;protein_id=HBQ7389127.1;transl_table=11 DAFVNP010000011.1 tpg gene 48053 49384 . - . ID=gene-L8R42_001005;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=L8R42_001005 DAFVNP010000011.1 Protein Homology CDS 48053 49384 . - 0 ID=cds-HBQ7389128.1;Parent=gene-L8R42_001005;Dbxref=NCBI_GP:HBQ7389128.1;Name=HBQ7389128.1;gbkey=CDS;gene=cadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=L8R42_001005;product=cadaverine/lysine antiporter;protein_id=HBQ7389128.1;transl_table=11 DAFVNP010000011.1 tpg gene 49745 51289 . - . ID=gene-L8R42_001006;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=L8R42_001006 DAFVNP010000011.1 Protein Homology CDS 49745 51289 . - 0 ID=cds-HBQ7389129.1;Parent=gene-L8R42_001006;Dbxref=NCBI_GP:HBQ7389129.1;Name=HBQ7389129.1;gbkey=CDS;gene=cadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=L8R42_001006;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=HBQ7389129.1;transl_table=11 DAFVNP010000011.1 tpg gene 51471 52661 . - . ID=gene-L8R42_001007;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=L8R42_001007 DAFVNP010000011.1 Protein Homology CDS 51471 52661 . - 0 ID=cds-HBQ7389130.1;Parent=gene-L8R42_001007;Dbxref=NCBI_GP:HBQ7389130.1;Name=HBQ7389130.1;gbkey=CDS;gene=hmpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=L8R42_001007;product=NO-inducible flavohemoprotein;protein_id=HBQ7389130.1;transl_table=11 DAFVNP010000011.1 tpg gene 52986 54239 . + . ID=gene-L8R42_001008;Name=L8R42_001008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001008 DAFVNP010000011.1 Protein Homology CDS 52986 54239 . + 0 ID=cds-HBQ7389131.1;Parent=gene-L8R42_001008;Dbxref=NCBI_GP:HBQ7389131.1;Name=HBQ7389131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=L8R42_001008;product=serine hydroxymethyltransferase;protein_id=HBQ7389131.1;transl_table=11 DAFVNP010000011.1 tpg gene 54435 55574 . + . ID=gene-L8R42_001009;Name=L8R42_001009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001009 DAFVNP010000011.1 Protein Homology CDS 54435 55574 . + 0 ID=cds-HBQ7389132.1;Parent=gene-L8R42_001009;Dbxref=NCBI_GP:HBQ7389132.1;Name=HBQ7389132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=L8R42_001009;product=3-phenylpropionate MFS transporter;protein_id=HBQ7389132.1;transl_table=11 DAFVNP010000011.1 tpg gene 55569 56846 . - . ID=gene-L8R42_001010;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=L8R42_001010 DAFVNP010000011.1 Protein Homology CDS 55569 56846 . - 0 ID=cds-HBQ7389133.1;Parent=gene-L8R42_001010;Dbxref=NCBI_GP:HBQ7389133.1;Name=HBQ7389133.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=L8R42_001010;product=stationary phase inducible protein CsiE;protein_id=HBQ7389133.1;transl_table=11 DAFVNP010000011.1 tpg gene 56972 57610 . + . ID=gene-L8R42_001011;Name=L8R42_001011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001011 DAFVNP010000011.1 Protein Homology CDS 56972 57610 . + 0 ID=cds-HBQ7389134.1;Parent=gene-L8R42_001011;Dbxref=NCBI_GP:HBQ7389134.1;Name=HBQ7389134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=L8R42_001011;product=DUF1007 family protein;protein_id=HBQ7389134.1;transl_table=11 DAFVNP010000011.1 tpg gene 57601 58587 . + . ID=gene-L8R42_001012;Name=L8R42_001012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001012 DAFVNP010000011.1 Protein Homology CDS 57601 58587 . + 0 ID=cds-HBQ7389135.1;Parent=gene-L8R42_001012;Dbxref=NCBI_GP:HBQ7389135.1;Name=HBQ7389135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=L8R42_001012;product=nickel/cobalt transporter;protein_id=HBQ7389135.1;transl_table=11 DAFVNP010000011.1 tpg gene 58588 59601 . - . ID=gene-L8R42_001013;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=L8R42_001013 DAFVNP010000011.1 Protein Homology CDS 58588 59601 . - 0 ID=cds-HBQ7389136.1;Parent=gene-L8R42_001013;Dbxref=NCBI_GP:HBQ7389136.1;Name=HBQ7389136.1;gbkey=CDS;gene=asrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=L8R42_001013;product=sulfite reductase subunit C;protein_id=HBQ7389136.1;transl_table=11 DAFVNP010000011.1 tpg gene 59612 60430 . - . ID=gene-L8R42_001014;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=L8R42_001014 DAFVNP010000011.1 Protein Homology CDS 59612 60430 . - 0 ID=cds-HBQ7389137.1;Parent=gene-L8R42_001014;Dbxref=NCBI_GP:HBQ7389137.1;Name=HBQ7389137.1;gbkey=CDS;gene=asrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=L8R42_001014;product=anaerobic sulfite reductase subunit B;protein_id=HBQ7389137.1;transl_table=11 DAFVNP010000011.1 tpg gene 60434 61477 . - . ID=gene-L8R42_001015;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=L8R42_001015 DAFVNP010000011.1 Protein Homology CDS 60434 61477 . - 0 ID=cds-HBQ7389138.1;Parent=gene-L8R42_001015;Dbxref=NCBI_GP:HBQ7389138.1;Name=HBQ7389138.1;gbkey=CDS;gene=asrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=L8R42_001015;product=anaerobic sulfite reductase subunit A;protein_id=HBQ7389138.1;transl_table=11 DAFVNP010000011.1 tpg gene 61659 62537 . - . ID=gene-L8R42_001016;Name=L8R42_001016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001016 DAFVNP010000011.1 Protein Homology CDS 61659 62537 . - 0 ID=cds-HBQ7389139.1;Parent=gene-L8R42_001016;Dbxref=NCBI_GP:HBQ7389139.1;Name=HBQ7389139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=L8R42_001016;product=alpha/beta hydrolase;protein_id=HBQ7389139.1;transl_table=11 DAFVNP010000011.1 tpg gene 62682 63485 . - . ID=gene-L8R42_001017;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=L8R42_001017 DAFVNP010000011.1 Protein Homology CDS 62682 63485 . - 0 ID=cds-HBQ7389140.1;Parent=gene-L8R42_001017;Dbxref=NCBI_GP:HBQ7389140.1;Name=HBQ7389140.1;gbkey=CDS;gene=suhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=L8R42_001017;product=inositol-1-monophosphatase;protein_id=HBQ7389140.1;transl_table=11 DAFVNP010000011.1 tpg gene 63604 64335 . + . ID=gene-L8R42_001018;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=L8R42_001018 DAFVNP010000011.1 Protein Homology CDS 63604 64335 . + 0 ID=cds-HBQ7389141.1;Parent=gene-L8R42_001018;Dbxref=NCBI_GP:HBQ7389141.1;Name=HBQ7389141.1;gbkey=CDS;gene=trmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=L8R42_001018;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=HBQ7389141.1;transl_table=11 DAFVNP010000011.1 tpg gene 64495 64989 . + . ID=gene-L8R42_001019;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=L8R42_001019 DAFVNP010000011.1 Protein Homology CDS 64495 64989 . + 0 ID=cds-HBQ7389142.1;Parent=gene-L8R42_001019;Dbxref=NCBI_GP:HBQ7389142.1;Name=HBQ7389142.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=L8R42_001019;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=HBQ7389142.1;transl_table=11 DAFVNP010000011.1 tpg gene 65170 66384 . + . ID=gene-L8R42_001020;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=L8R42_001020 DAFVNP010000011.1 Protein Homology CDS 65170 66384 . + 0 ID=cds-HBQ7389143.1;Parent=gene-L8R42_001020;Dbxref=NCBI_GP:HBQ7389143.1;Name=HBQ7389143.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=L8R42_001020;product=cysteine desulfurase;protein_id=HBQ7389143.1;transl_table=11 DAFVNP010000011.1 tpg gene 66412 66798 . + . ID=gene-L8R42_001021;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=L8R42_001021 DAFVNP010000011.1 Protein Homology CDS 66412 66798 . + 0 ID=cds-HBQ7389144.1;Parent=gene-L8R42_001021;Dbxref=NCBI_GP:HBQ7389144.1;Name=HBQ7389144.1;gbkey=CDS;gene=iscU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=L8R42_001021;product=Fe-S cluster assembly scaffold IscU;protein_id=HBQ7389144.1;transl_table=11 DAFVNP010000011.1 tpg gene 66827 67150 . + . ID=gene-L8R42_001022;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=L8R42_001022 DAFVNP010000011.1 Protein Homology CDS 66827 67150 . + 0 ID=cds-HBQ7389145.1;Parent=gene-L8R42_001022;Dbxref=NCBI_GP:HBQ7389145.1;Name=HBQ7389145.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=L8R42_001022;product=iron-sulfur cluster assembly protein IscA;protein_id=HBQ7389145.1;transl_table=11 DAFVNP010000011.1 tpg gene 67346 67861 . + . ID=gene-L8R42_001023;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=L8R42_001023 DAFVNP010000011.1 Protein Homology CDS 67346 67861 . + 0 ID=cds-HBQ7389146.1;Parent=gene-L8R42_001023;Dbxref=NCBI_GP:HBQ7389146.1;Name=HBQ7389146.1;gbkey=CDS;gene=hscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=L8R42_001023;product=co-chaperone HscB;protein_id=HBQ7389146.1;transl_table=11 DAFVNP010000011.1 tpg gene 67874 69724 . + . ID=gene-L8R42_001024;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=L8R42_001024 DAFVNP010000011.1 Protein Homology CDS 67874 69724 . + 0 ID=cds-HBQ7389147.1;Parent=gene-L8R42_001024;Dbxref=NCBI_GP:HBQ7389147.1;Name=HBQ7389147.1;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=L8R42_001024;product=Fe-S protein assembly chaperone HscA;protein_id=HBQ7389147.1;transl_table=11 DAFVNP010000011.1 tpg gene 69726 70061 . + . ID=gene-L8R42_001025;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=L8R42_001025 DAFVNP010000011.1 Protein Homology CDS 69726 70061 . + 0 ID=cds-HBQ7389148.1;Parent=gene-L8R42_001025;Dbxref=NCBI_GP:HBQ7389148.1;Name=HBQ7389148.1;gbkey=CDS;gene=fdx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=L8R42_001025;product=ISC system 2Fe-2S type ferredoxin;protein_id=HBQ7389148.1;transl_table=11 DAFVNP010000011.1 tpg gene 70073 70273 . + . ID=gene-L8R42_001026;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=L8R42_001026 DAFVNP010000011.1 Protein Homology CDS 70073 70273 . + 0 ID=cds-HBQ7389149.1;Parent=gene-L8R42_001026;Dbxref=NCBI_GP:HBQ7389149.1;Name=HBQ7389149.1;gbkey=CDS;gene=iscX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=L8R42_001026;product=Fe-S cluster assembly protein IscX;protein_id=HBQ7389149.1;transl_table=11 DAFVNP010000011.1 tpg gene 70327 71610 . + . ID=gene-L8R42_001027;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=L8R42_001027 DAFVNP010000011.1 Protein Homology CDS 70327 71610 . + 0 ID=cds-HBQ7389150.1;Parent=gene-L8R42_001027;Dbxref=NCBI_GP:HBQ7389150.1;Name=HBQ7389150.1;gbkey=CDS;gene=pepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=L8R42_001027;product=aminopeptidase PepB;protein_id=HBQ7389150.1;transl_table=11 DAFVNP010000011.1 tpg gene 71720 72496 . + . ID=gene-L8R42_001028;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=L8R42_001028 DAFVNP010000011.1 Protein Homology CDS 71720 72496 . + 0 ID=cds-HBQ7389151.1;Parent=gene-L8R42_001028;Dbxref=NCBI_GP:HBQ7389151.1;Name=HBQ7389151.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=L8R42_001028;product=enhanced serine sensitivity protein SseB;protein_id=HBQ7389151.1;transl_table=11 DAFVNP010000011.1 tpg gene 73065 73733 . - . ID=gene-L8R42_001029;Name=L8R42_001029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001029 DAFVNP010000011.1 Protein Homology CDS 73065 73733 . - 0 ID=cds-HBQ7389152.1;Parent=gene-L8R42_001029;Dbxref=NCBI_GP:HBQ7389152.1;Name=HBQ7389152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=L8R42_001029;product=DUF5066 family protein;protein_id=HBQ7389152.1;transl_table=11 DAFVNP010000011.1 tpg gene 73775 73999 . + . ID=gene-L8R42_001030;Name=L8R42_001030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001030 DAFVNP010000011.1 Protein Homology CDS 73775 73999 . + 0 ID=cds-HBQ7389153.1;Parent=gene-L8R42_001030;Dbxref=NCBI_GP:HBQ7389153.1;Name=HBQ7389153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=L8R42_001030;product=hypothetical protein;protein_id=HBQ7389153.1;transl_table=11 DAFVNP010000011.1 tpg gene 73979 74821 . - . ID=gene-L8R42_001031;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=L8R42_001031 DAFVNP010000011.1 Protein Homology CDS 73979 74821 . - 0 ID=cds-HBQ7389154.1;Parent=gene-L8R42_001031;Dbxref=NCBI_GP:HBQ7389154.1;Name=HBQ7389154.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=L8R42_001031;product=3-mercaptopyruvate sulfurtransferase;protein_id=HBQ7389154.1;transl_table=11 DAFVNP010000011.1 tpg gene 75030 79970 . + . ID=gene-L8R42_001032;Name=L8R42_001032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001032 DAFVNP010000011.1 Protein Homology CDS 75030 79970 . + 0 ID=cds-HBQ7389155.1;Parent=gene-L8R42_001032;Dbxref=NCBI_GP:HBQ7389155.1;Name=HBQ7389155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=L8R42_001032;product=alpha-2-macroglobulin family protein;protein_id=HBQ7389155.1;transl_table=11 DAFVNP010000011.1 tpg gene 79971 80492 . + . ID=gene-L8R42_001033;Name=L8R42_001033;end_range=80492,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001033;partial=true DAFVNP010000011.1 Protein Homology CDS 79971 80492 . + 0 ID=cds-HBQ7389156.1;Parent=gene-L8R42_001033;Dbxref=NCBI_GP:HBQ7389156.1;Name=HBQ7389156.1;end_range=80492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=L8R42_001033;partial=true;product=transglycosylase domain-containing protein;protein_id=HBQ7389156.1;transl_table=11 ##sequence-region DAFVNP010000012.1 1 77388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000012.1 tpg region 1 77388 . + . ID=DAFVNP010000012.1:1..77388;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000012.1 tpg pseudogene 1 629 . - . ID=gene-L8R42_001034;Name=L8R42_001034;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001034;pseudo=true DAFVNP010000012.1 Protein Homology CDS 1 629 . - 0 ID=cds-L8R42_001034;Parent=gene-L8R42_001034;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=L8R42_001034;product=IS3-like element IS1351 family transposase;pseudo=true;transl_table=11 DAFVNP010000012.1 tpg pseudogene 665 1686 . + . ID=gene-L8R42_001035;Name=L8R42_001035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001035;pseudo=true DAFVNP010000012.1 Protein Homology CDS 665 1686 . + 0 ID=cds-L8R42_001035;Parent=gene-L8R42_001035;Note=programmed frameshift%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=L8R42_001035;product=IS3 family transposase;pseudo=true;transl_table=11 DAFVNP010000012.1 tpg gene 1908 3395 . - . ID=gene-L8R42_001036;Name=L8R42_001036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001036 DAFVNP010000012.1 Protein Homology CDS 1908 3395 . - 0 ID=cds-HBQ7389157.1;Parent=gene-L8R42_001036;Dbxref=NCBI_GP:HBQ7389157.1;Name=HBQ7389157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622958.1;locus_tag=L8R42_001036;product=hypothetical protein;protein_id=HBQ7389157.1;transl_table=11 DAFVNP010000012.1 tpg gene 3411 4331 . - . ID=gene-L8R42_001037;Name=L8R42_001037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001037 DAFVNP010000012.1 Protein Homology CDS 3411 4331 . - 0 ID=cds-HBQ7389158.1;Parent=gene-L8R42_001037;Dbxref=NCBI_GP:HBQ7389158.1;Name=HBQ7389158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703627.1;locus_tag=L8R42_001037;product=glycosyltransferase family 2 protein;protein_id=HBQ7389158.1;transl_table=11 DAFVNP010000012.1 tpg gene 4328 4690 . - . ID=gene-L8R42_001038;Name=L8R42_001038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001038 DAFVNP010000012.1 Protein Homology CDS 4328 4690 . - 0 ID=cds-HBQ7389159.1;Parent=gene-L8R42_001038;Dbxref=NCBI_GP:HBQ7389159.1;Name=HBQ7389159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=L8R42_001038;product=GtrA family protein;protein_id=HBQ7389159.1;transl_table=11 DAFVNP010000012.1 tpg gene 5115 5324 . - . ID=gene-L8R42_001039;Name=L8R42_001039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001039 DAFVNP010000012.1 Protein Homology CDS 5115 5324 . - 0 ID=cds-HBQ7389160.1;Parent=gene-L8R42_001039;Dbxref=NCBI_GP:HBQ7389160.1;Name=HBQ7389160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736836.1;locus_tag=L8R42_001039;product=copper-binding protein;protein_id=HBQ7389160.1;transl_table=11 DAFVNP010000012.1 tpg pseudogene 5560 5949 . - . ID=gene-L8R42_001040;Name=L8R42_001040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001040;pseudo=true DAFVNP010000012.1 Protein Homology CDS 5560 5949 . - 0 ID=cds-L8R42_001040;Parent=gene-L8R42_001040;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253839.1;locus_tag=L8R42_001040;product=GHKL domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000012.1 tpg pseudogene 5944 6177 . + . ID=gene-L8R42_001041;Name=L8R42_001041;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001041;pseudo=true DAFVNP010000012.1 Protein Homology CDS 5944 6177 . + 0 ID=cds-L8R42_001041;Parent=gene-L8R42_001041;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011711636.1;locus_tag=L8R42_001041;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 DAFVNP010000012.1 tpg gene 6228 7082 . - . ID=gene-L8R42_001042;Name=L8R42_001042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001042 DAFVNP010000012.1 Protein Homology CDS 6228 7082 . - 0 ID=cds-HBQ7389161.1;Parent=gene-L8R42_001042;Dbxref=NCBI_GP:HBQ7389161.1;Name=HBQ7389161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=L8R42_001042;product=AraC family transcriptional regulator;protein_id=HBQ7389161.1;transl_table=11 DAFVNP010000012.1 tpg gene 7298 8623 . + . ID=gene-L8R42_001043;Name=L8R42_001043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001043 DAFVNP010000012.1 Protein Homology CDS 7298 8623 . + 0 ID=cds-HBQ7389162.1;Parent=gene-L8R42_001043;Dbxref=NCBI_GP:HBQ7389162.1;Name=HBQ7389162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=L8R42_001043;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=HBQ7389162.1;transl_table=11 DAFVNP010000012.1 tpg gene 8780 9016 . + . ID=gene-L8R42_001044;Name=L8R42_001044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001044 DAFVNP010000012.1 Protein Homology CDS 8780 9016 . + 0 ID=cds-HBQ7389163.1;Parent=gene-L8R42_001044;Dbxref=NCBI_GP:HBQ7389163.1;Name=HBQ7389163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=L8R42_001044;product=DUF1471 domain-containing protein;protein_id=HBQ7389163.1;transl_table=11 DAFVNP010000012.1 tpg gene 9029 9589 . + . ID=gene-L8R42_001045;Name=L8R42_001045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001045 DAFVNP010000012.1 Protein Homology CDS 9029 9589 . + 0 ID=cds-HBQ7389164.1;Parent=gene-L8R42_001045;Dbxref=NCBI_GP:HBQ7389164.1;Name=HBQ7389164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=L8R42_001045;product=YkgB family protein;protein_id=HBQ7389164.1;transl_table=11 DAFVNP010000012.1 tpg gene 9661 10836 . - . ID=gene-L8R42_001046;Name=L8R42_001046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001046 DAFVNP010000012.1 Protein Homology CDS 9661 10836 . - 0 ID=cds-HBQ7389165.1;Parent=gene-L8R42_001046;Dbxref=NCBI_GP:HBQ7389165.1;Name=HBQ7389165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=L8R42_001046;product=DNA repair protein;protein_id=HBQ7389165.1;transl_table=11 DAFVNP010000012.1 tpg gene 11162 12556 . + . ID=gene-L8R42_001047;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=L8R42_001047 DAFVNP010000012.1 Protein Homology CDS 11162 12556 . + 0 ID=cds-HBQ7389166.1;Parent=gene-L8R42_001047;Dbxref=NCBI_GP:HBQ7389166.1;Name=HBQ7389166.1;gbkey=CDS;gene=pheP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=L8R42_001047;product=phenylalanine transporter;protein_id=HBQ7389166.1;transl_table=11 DAFVNP010000012.1 tpg gene 12598 13845 . - . ID=gene-L8R42_001048;Name=L8R42_001048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001048 DAFVNP010000012.1 Protein Homology CDS 12598 13845 . - 0 ID=cds-HBQ7389167.1;Parent=gene-L8R42_001048;Dbxref=NCBI_GP:HBQ7389167.1;Name=HBQ7389167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=L8R42_001048;product=mechanosensitive ion channel family protein;protein_id=HBQ7389167.1;transl_table=11 DAFVNP010000012.1 tpg gene 14156 16126 . + . ID=gene-L8R42_001049;Name=L8R42_001049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001049 DAFVNP010000012.1 Protein Homology CDS 14156 16126 . + 0 ID=cds-HBQ7389168.1;Parent=gene-L8R42_001049;Dbxref=NCBI_GP:HBQ7389168.1;Name=HBQ7389168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=L8R42_001049;product=autotransporter domain-containing esterase;protein_id=HBQ7389168.1;transl_table=11 DAFVNP010000012.1 tpg gene 16293 19022 . + . ID=gene-L8R42_001050;Name=L8R42_001050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001050 DAFVNP010000012.1 Protein Homology CDS 16293 19022 . + 0 ID=cds-HBQ7389169.1;Parent=gene-L8R42_001050;Dbxref=NCBI_GP:HBQ7389169.1;Name=HBQ7389169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=L8R42_001050;product=sigma-54-dependent transcriptional regulator;protein_id=HBQ7389169.1;transl_table=11 DAFVNP010000012.1 tpg gene 19150 20136 . - . ID=gene-L8R42_001051;Name=L8R42_001051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001051 DAFVNP010000012.1 Protein Homology CDS 19150 20136 . - 0 ID=cds-HBQ7389170.1;Parent=gene-L8R42_001051;Dbxref=NCBI_GP:HBQ7389170.1;Name=HBQ7389170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=L8R42_001051;product=SIS domain-containing protein;protein_id=HBQ7389170.1;transl_table=11 DAFVNP010000012.1 tpg gene 20203 21246 . - . ID=gene-L8R42_001052;Name=L8R42_001052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001052 DAFVNP010000012.1 Protein Homology CDS 20203 21246 . - 0 ID=cds-HBQ7389171.1;Parent=gene-L8R42_001052;Dbxref=NCBI_GP:HBQ7389171.1;Name=HBQ7389171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=L8R42_001052;product=SIS domain-containing protein;protein_id=HBQ7389171.1;transl_table=11 DAFVNP010000012.1 tpg gene 21279 22133 . - . ID=gene-L8R42_001053;Name=L8R42_001053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001053 DAFVNP010000012.1 Protein Homology CDS 21279 22133 . - 0 ID=cds-HBQ7389172.1;Parent=gene-L8R42_001053;Dbxref=NCBI_GP:HBQ7389172.1;Name=HBQ7389172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=L8R42_001053;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=HBQ7389172.1;transl_table=11 DAFVNP010000012.1 tpg gene 22136 22879 . - . ID=gene-L8R42_001054;Name=L8R42_001054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001054 DAFVNP010000012.1 Protein Homology CDS 22136 22879 . - 0 ID=cds-HBQ7389173.1;Parent=gene-L8R42_001054;Dbxref=NCBI_GP:HBQ7389173.1;Name=HBQ7389173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=L8R42_001054;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=HBQ7389173.1;transl_table=11 DAFVNP010000012.1 tpg gene 22894 23364 . - . ID=gene-L8R42_001055;Name=L8R42_001055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001055 DAFVNP010000012.1 Protein Homology CDS 22894 23364 . - 0 ID=cds-HBQ7389174.1;Parent=gene-L8R42_001055;Dbxref=NCBI_GP:HBQ7389174.1;Name=HBQ7389174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=L8R42_001055;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=HBQ7389174.1;transl_table=11 DAFVNP010000012.1 tpg gene 23342 23791 . - . ID=gene-L8R42_001056;Name=L8R42_001056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001056 DAFVNP010000012.1 Protein Homology CDS 23342 23791 . - 0 ID=cds-HBQ7389175.1;Parent=gene-L8R42_001056;Dbxref=NCBI_GP:HBQ7389175.1;Name=HBQ7389175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=L8R42_001056;product=PTS sugar transporter subunit IIA;protein_id=HBQ7389175.1;transl_table=11 DAFVNP010000012.1 tpg gene 23991 24644 . - . ID=gene-L8R42_001057;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=L8R42_001057 DAFVNP010000012.1 Protein Homology CDS 23991 24644 . - 0 ID=cds-HBQ7389176.1;Parent=gene-L8R42_001057;Dbxref=NCBI_GP:HBQ7389176.1;Name=HBQ7389176.1;gbkey=CDS;gene=nfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=L8R42_001057;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=HBQ7389176.1;transl_table=11 DAFVNP010000012.1 tpg gene 24741 25109 . - . ID=gene-L8R42_001058;Name=L8R42_001058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001058 DAFVNP010000012.1 Protein Homology CDS 24741 25109 . - 0 ID=cds-HBQ7389177.1;Parent=gene-L8R42_001058;Dbxref=NCBI_GP:HBQ7389177.1;Name=HBQ7389177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=L8R42_001058;product=MmcQ/YjbR family DNA-binding protein;protein_id=HBQ7389177.1;transl_table=11 DAFVNP010000012.1 tpg gene 25109 25690 . - . ID=gene-L8R42_001059;Name=L8R42_001059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001059 DAFVNP010000012.1 Protein Homology CDS 25109 25690 . - 0 ID=cds-HBQ7389178.1;Parent=gene-L8R42_001059;Dbxref=NCBI_GP:HBQ7389178.1;Name=HBQ7389178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=L8R42_001059;product=TetR/AcrR family transcriptional regulator;protein_id=HBQ7389178.1;transl_table=11 DAFVNP010000012.1 tpg gene 25979 26320 . + . ID=gene-L8R42_001060;Name=L8R42_001060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001060 DAFVNP010000012.1 Protein Homology CDS 25979 26320 . + 0 ID=cds-HBQ7389179.1;Parent=gene-L8R42_001060;Dbxref=NCBI_GP:HBQ7389179.1;Name=HBQ7389179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=L8R42_001060;product=RamA family antibiotic efflux transcriptional regulator;protein_id=HBQ7389179.1;transl_table=11 DAFVNP010000012.1 tpg gene 26326 26574 . - . ID=gene-L8R42_001061;Name=L8R42_001061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001061 DAFVNP010000012.1 Protein Homology CDS 26326 26574 . - 0 ID=cds-HBQ7389180.1;Parent=gene-L8R42_001061;Dbxref=NCBI_GP:HBQ7389180.1;Name=HBQ7389180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=L8R42_001061;product=DUF1158 family protein;protein_id=HBQ7389180.1;transl_table=11 DAFVNP010000012.1 tpg gene 26641 27759 . - . ID=gene-L8R42_001062;Name=L8R42_001062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001062 DAFVNP010000012.1 Protein Homology CDS 26641 27759 . - 0 ID=cds-HBQ7389181.1;Parent=gene-L8R42_001062;Dbxref=NCBI_GP:HBQ7389181.1;Name=HBQ7389181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=L8R42_001062;product=glutamate--cysteine ligase;protein_id=HBQ7389181.1;transl_table=11 DAFVNP010000012.1 tpg gene 27771 28475 . - . ID=gene-L8R42_001063;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=L8R42_001063 DAFVNP010000012.1 Protein Homology CDS 27771 28475 . - 0 ID=cds-HBQ7389182.1;Parent=gene-L8R42_001063;Dbxref=NCBI_GP:HBQ7389182.1;Name=HBQ7389182.1;gbkey=CDS;gene=entD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=L8R42_001063;product=enterobactin synthase subunit EntD;protein_id=HBQ7389182.1;transl_table=11 DAFVNP010000012.1 tpg gene 28522 30777 . - . ID=gene-L8R42_001064;Name=L8R42_001064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001064 DAFVNP010000012.1 Protein Homology CDS 28522 30777 . - 0 ID=cds-HBQ7389183.1;Parent=gene-L8R42_001064;Dbxref=NCBI_GP:HBQ7389183.1;Name=HBQ7389183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=L8R42_001064;product=TonB-dependent siderophore receptor;protein_id=HBQ7389183.1;transl_table=11 DAFVNP010000012.1 tpg gene 30966 32180 . + . ID=gene-L8R42_001065;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=L8R42_001065 DAFVNP010000012.1 Protein Homology CDS 30966 32180 . + 0 ID=cds-HBQ7389184.1;Parent=gene-L8R42_001065;Dbxref=NCBI_GP:HBQ7389184.1;Name=HBQ7389184.1;gbkey=CDS;gene=fes;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=L8R42_001065;product=enterochelin esterase;protein_id=HBQ7389184.1;transl_table=11 DAFVNP010000012.1 tpg gene 32211 32429 . + . ID=gene-L8R42_001066;Name=L8R42_001066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001066 DAFVNP010000012.1 Protein Homology CDS 32211 32429 . + 0 ID=cds-HBQ7389185.1;Parent=gene-L8R42_001066;Dbxref=NCBI_GP:HBQ7389185.1;Name=HBQ7389185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=L8R42_001066;product=MbtH family protein;protein_id=HBQ7389185.1;transl_table=11 DAFVNP010000012.1 tpg gene 32426 36310 . + . ID=gene-L8R42_001067;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=L8R42_001067 DAFVNP010000012.1 Protein Homology CDS 32426 36310 . + 0 ID=cds-HBQ7389186.1;Parent=gene-L8R42_001067;Dbxref=NCBI_GP:HBQ7389186.1;Name=HBQ7389186.1;gbkey=CDS;gene=entF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=L8R42_001067;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=HBQ7389186.1;transl_table=11 DAFVNP010000012.1 tpg gene 36560 37696 . + . ID=gene-L8R42_001068;Name=fepE;gbkey=Gene;gene=fepE;gene_biotype=protein_coding;locus_tag=L8R42_001068 DAFVNP010000012.1 Protein Homology CDS 36560 37696 . + 0 ID=cds-HBQ7389187.1;Parent=gene-L8R42_001068;Dbxref=NCBI_GP:HBQ7389187.1;Name=HBQ7389187.1;gbkey=CDS;gene=fepE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=L8R42_001068;product=LPS O-antigen length regulator;protein_id=HBQ7389187.1;transl_table=11 DAFVNP010000012.1 tpg gene 37749 38543 . - . ID=gene-L8R42_001069;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=L8R42_001069 DAFVNP010000012.1 Protein Homology CDS 37749 38543 . - 0 ID=cds-HBQ7389188.1;Parent=gene-L8R42_001069;Dbxref=NCBI_GP:HBQ7389188.1;Name=HBQ7389188.1;gbkey=CDS;gene=fepC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=L8R42_001069;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=HBQ7389188.1;transl_table=11 DAFVNP010000012.1 tpg gene 38540 39529 . - . ID=gene-L8R42_001070;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=L8R42_001070 DAFVNP010000012.1 Protein Homology CDS 38540 39529 . - 0 ID=cds-HBQ7389189.1;Parent=gene-L8R42_001070;Dbxref=NCBI_GP:HBQ7389189.1;Name=HBQ7389189.1;gbkey=CDS;gene=fepG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=L8R42_001070;product=iron-enterobactin ABC transporter permease;protein_id=HBQ7389189.1;transl_table=11 DAFVNP010000012.1 tpg gene 39529 40536 . - . ID=gene-L8R42_001071;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=L8R42_001071 DAFVNP010000012.1 Protein Homology CDS 39529 40536 . - 0 ID=cds-HBQ7389190.1;Parent=gene-L8R42_001071;Dbxref=NCBI_GP:HBQ7389190.1;Name=HBQ7389190.1;gbkey=CDS;gene=fepD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=L8R42_001071;product=Fe(3+)-siderophore ABC transporter permease;protein_id=HBQ7389190.1;transl_table=11 DAFVNP010000012.1 tpg gene 40647 41891 . + . ID=gene-L8R42_001072;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=L8R42_001072 DAFVNP010000012.1 Protein Homology CDS 40647 41891 . + 0 ID=cds-HBQ7389191.1;Parent=gene-L8R42_001072;Dbxref=NCBI_GP:HBQ7389191.1;Name=HBQ7389191.1;gbkey=CDS;gene=entS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=L8R42_001072;product=enterobactin transporter EntS;protein_id=HBQ7389191.1;transl_table=11 DAFVNP010000012.1 tpg gene 41954 42910 . - . ID=gene-L8R42_001073;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=L8R42_001073 DAFVNP010000012.1 Protein Homology CDS 41954 42910 . - 0 ID=cds-HBQ7389192.1;Parent=gene-L8R42_001073;Dbxref=NCBI_GP:HBQ7389192.1;Name=HBQ7389192.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=L8R42_001073;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=HBQ7389192.1;transl_table=11 DAFVNP010000012.1 tpg gene 43219 44394 . + . ID=gene-L8R42_001074;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=L8R42_001074 DAFVNP010000012.1 Protein Homology CDS 43219 44394 . + 0 ID=cds-HBQ7389193.1;Parent=gene-L8R42_001074;Dbxref=NCBI_GP:HBQ7389193.1;Name=HBQ7389193.1;gbkey=CDS;gene=entC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=L8R42_001074;product=isochorismate synthase EntC;protein_id=HBQ7389193.1;transl_table=11 DAFVNP010000012.1 tpg gene 44404 46014 . + . ID=gene-L8R42_001075;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=L8R42_001075 DAFVNP010000012.1 Protein Homology CDS 44404 46014 . + 0 ID=cds-HBQ7389194.1;Parent=gene-L8R42_001075;Dbxref=NCBI_GP:HBQ7389194.1;Name=HBQ7389194.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=L8R42_001075;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=HBQ7389194.1;transl_table=11 DAFVNP010000012.1 tpg gene 46028 46885 . + . ID=gene-L8R42_001076;Name=L8R42_001076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001076 DAFVNP010000012.1 Protein Homology CDS 46028 46885 . + 0 ID=cds-HBQ7389195.1;Parent=gene-L8R42_001076;Dbxref=NCBI_GP:HBQ7389195.1;Name=HBQ7389195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=L8R42_001076;product=isochorismatase;protein_id=HBQ7389195.1;transl_table=11 DAFVNP010000012.1 tpg gene 46885 47640 . + . ID=gene-L8R42_001077;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=L8R42_001077 DAFVNP010000012.1 Protein Homology CDS 46885 47640 . + 0 ID=cds-HBQ7389196.1;Parent=gene-L8R42_001077;Dbxref=NCBI_GP:HBQ7389196.1;Name=HBQ7389196.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=L8R42_001077;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=HBQ7389196.1;transl_table=11 DAFVNP010000012.1 tpg gene 47643 48056 . + . ID=gene-L8R42_001078;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=L8R42_001078 DAFVNP010000012.1 Protein Homology CDS 47643 48056 . + 0 ID=cds-HBQ7389197.1;Parent=gene-L8R42_001078;Dbxref=NCBI_GP:HBQ7389197.1;Name=HBQ7389197.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=L8R42_001078;product=proofreading thioesterase EntH;protein_id=HBQ7389197.1;transl_table=11 DAFVNP010000012.1 tpg gene 48238 50343 . + . ID=gene-L8R42_001079;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=L8R42_001079 DAFVNP010000012.1 Protein Homology CDS 48238 50343 . + 0 ID=cds-HBQ7389198.1;Parent=gene-L8R42_001079;Dbxref=NCBI_GP:HBQ7389198.1;Name=HBQ7389198.1;gbkey=CDS;gene=cstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=L8R42_001079;product=carbon starvation protein CstA;protein_id=HBQ7389198.1;transl_table=11 DAFVNP010000012.1 tpg gene 50407 50604 . + . ID=gene-L8R42_001080;Name=L8R42_001080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001080 DAFVNP010000012.1 Protein Homology CDS 50407 50604 . + 0 ID=cds-HBQ7389199.1;Parent=gene-L8R42_001080;Dbxref=NCBI_GP:HBQ7389199.1;Name=HBQ7389199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=L8R42_001080;product=YbdD/YjiX family protein;protein_id=HBQ7389199.1;transl_table=11 DAFVNP010000012.1 tpg gene 50640 51728 . - . ID=gene-L8R42_001081;Name=L8R42_001081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001081 DAFVNP010000012.1 Protein Homology CDS 50640 51728 . - 0 ID=cds-HBQ7389200.1;Parent=gene-L8R42_001081;Dbxref=NCBI_GP:HBQ7389200.1;Name=HBQ7389200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=L8R42_001081;product=oxidoreductase;protein_id=HBQ7389200.1;transl_table=11 DAFVNP010000012.1 tpg gene 51855 53015 . + . ID=gene-L8R42_001082;Name=L8R42_001082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001082 DAFVNP010000012.1 Protein Homology CDS 51855 53015 . + 0 ID=cds-HBQ7389201.1;Parent=gene-L8R42_001082;Dbxref=NCBI_GP:HBQ7389201.1;Name=HBQ7389201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=L8R42_001082;product=pyridoxal phosphate-dependent aminotransferase;protein_id=HBQ7389201.1;transl_table=11 DAFVNP010000012.1 tpg gene 53016 53633 . - . ID=gene-L8R42_001083;Name=L8R42_001083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001083 DAFVNP010000012.1 Protein Homology CDS 53016 53633 . - 0 ID=cds-HBQ7389202.1;Parent=gene-L8R42_001083;Dbxref=NCBI_GP:HBQ7389202.1;Name=HBQ7389202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=L8R42_001083;product=ParB-like nuclease domain-containing protein;protein_id=HBQ7389202.1;transl_table=11 DAFVNP010000012.1 tpg gene 53606 54841 . - . ID=gene-L8R42_001084;Name=L8R42_001084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001084 DAFVNP010000012.1 Protein Homology CDS 53606 54841 . - 0 ID=cds-HBQ7389203.1;Parent=gene-L8R42_001084;Dbxref=NCBI_GP:HBQ7389203.1;Name=HBQ7389203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=L8R42_001084;product=phosphoadenosine phosphosulfate reductase;protein_id=HBQ7389203.1;transl_table=11 DAFVNP010000012.1 tpg gene 55005 55910 . - . ID=gene-L8R42_001085;Name=L8R42_001085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001085 DAFVNP010000012.1 Protein Homology CDS 55005 55910 . - 0 ID=cds-HBQ7389204.1;Parent=gene-L8R42_001085;Dbxref=NCBI_GP:HBQ7389204.1;Name=HBQ7389204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=L8R42_001085;product=LysR family transcriptional regulator;protein_id=HBQ7389204.1;transl_table=11 DAFVNP010000012.1 tpg gene 56227 56973 . - . ID=gene-L8R42_001086;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=L8R42_001086 DAFVNP010000012.1 Protein Homology CDS 56227 56973 . - 0 ID=cds-HBQ7389205.1;Parent=gene-L8R42_001086;Dbxref=NCBI_GP:HBQ7389205.1;Name=HBQ7389205.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=L8R42_001086;product=thiol:disulfide interchange protein DsbG;protein_id=HBQ7389205.1;transl_table=11 DAFVNP010000012.1 tpg gene 57414 57977 . + . ID=gene-L8R42_001087;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=L8R42_001087 DAFVNP010000012.1 Protein Homology CDS 57414 57977 . + 0 ID=cds-HBQ7389206.1;Parent=gene-L8R42_001087;Dbxref=NCBI_GP:HBQ7389206.1;Name=HBQ7389206.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=L8R42_001087;product=alkyl hydroperoxide reductase subunit C;protein_id=HBQ7389206.1;transl_table=11 DAFVNP010000012.1 tpg gene 58219 59784 . + . ID=gene-L8R42_001088;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=L8R42_001088 DAFVNP010000012.1 Protein Homology CDS 58219 59784 . + 0 ID=cds-HBQ7389207.1;Parent=gene-L8R42_001088;Dbxref=NCBI_GP:HBQ7389207.1;Name=HBQ7389207.1;gbkey=CDS;gene=ahpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=L8R42_001088;product=alkyl hydroperoxide reductase subunit F;protein_id=HBQ7389207.1;transl_table=11 DAFVNP010000012.1 tpg gene 60117 60677 . + . ID=gene-L8R42_001089;Name=L8R42_001089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001089 DAFVNP010000012.1 Protein Homology CDS 60117 60677 . + 0 ID=cds-HBQ7389208.1;Parent=gene-L8R42_001089;Dbxref=NCBI_GP:HBQ7389208.1;Name=HBQ7389208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=L8R42_001089;product=molecular chaperone;protein_id=HBQ7389208.1;transl_table=11 DAFVNP010000012.1 tpg gene 60670 62949 . + . ID=gene-L8R42_001090;Name=L8R42_001090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001090 DAFVNP010000012.1 Protein Homology CDS 60670 62949 . + 0 ID=cds-HBQ7389209.1;Parent=gene-L8R42_001090;Dbxref=NCBI_GP:HBQ7389209.1;Name=HBQ7389209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=L8R42_001090;product=molybdopterin-dependent oxidoreductase;protein_id=HBQ7389209.1;transl_table=11 DAFVNP010000012.1 tpg gene 62946 63503 . + . ID=gene-L8R42_001091;Name=L8R42_001091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001091 DAFVNP010000012.1 Protein Homology CDS 62946 63503 . + 0 ID=cds-HBQ7389210.1;Parent=gene-L8R42_001091;Dbxref=NCBI_GP:HBQ7389210.1;Name=HBQ7389210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=L8R42_001091;product=4Fe-4S dicluster domain-containing protein;protein_id=HBQ7389210.1;transl_table=11 DAFVNP010000012.1 tpg gene 63503 64270 . + . ID=gene-L8R42_001092;Name=L8R42_001092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001092 DAFVNP010000012.1 Protein Homology CDS 63503 64270 . + 0 ID=cds-HBQ7389211.1;Parent=gene-L8R42_001092;Dbxref=NCBI_GP:HBQ7389211.1;Name=HBQ7389211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=L8R42_001092;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HBQ7389211.1;transl_table=11 DAFVNP010000012.1 tpg gene 64338 64766 . - . ID=gene-L8R42_001093;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=L8R42_001093 DAFVNP010000012.1 Protein Homology CDS 64338 64766 . - 0 ID=cds-HBQ7389212.1;Parent=gene-L8R42_001093;Dbxref=NCBI_GP:HBQ7389212.1;Name=HBQ7389212.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=L8R42_001093;product=universal stress protein UspG;protein_id=HBQ7389212.1;transl_table=11 DAFVNP010000012.1 tpg gene 64989 66227 . + . ID=gene-L8R42_001094;Name=L8R42_001094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001094 DAFVNP010000012.1 Protein Homology CDS 64989 66227 . + 0 ID=cds-HBQ7389213.1;Parent=gene-L8R42_001094;Dbxref=NCBI_GP:HBQ7389213.1;Name=HBQ7389213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=L8R42_001094;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=HBQ7389213.1;transl_table=11 DAFVNP010000012.1 tpg gene 66310 66720 . - . ID=gene-L8R42_001095;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=L8R42_001095 DAFVNP010000012.1 Protein Homology CDS 66310 66720 . - 0 ID=cds-HBQ7389214.1;Parent=gene-L8R42_001095;Dbxref=NCBI_GP:HBQ7389214.1;Name=HBQ7389214.1;gbkey=CDS;gene=rnk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=L8R42_001095;product=nucleoside diphosphate kinase regulator;protein_id=HBQ7389214.1;transl_table=11 DAFVNP010000012.1 tpg gene 66955 67761 . - . ID=gene-L8R42_001096;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=L8R42_001096 DAFVNP010000012.1 Protein Homology CDS 66955 67761 . - 0 ID=cds-HBQ7389215.1;Parent=gene-L8R42_001096;Dbxref=NCBI_GP:HBQ7389215.1;Name=HBQ7389215.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=L8R42_001096;product=ribonuclease I;protein_id=HBQ7389215.1;transl_table=11 DAFVNP010000012.1 tpg gene 67871 69334 . - . ID=gene-L8R42_001097;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=L8R42_001097 DAFVNP010000012.1 Protein Homology CDS 67871 69334 . - 0 ID=cds-HBQ7389216.1;Parent=gene-L8R42_001097;Dbxref=NCBI_GP:HBQ7389216.1;Name=HBQ7389216.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=L8R42_001097;product=citrate/succinate antiporter CitT;protein_id=HBQ7389216.1;transl_table=11 DAFVNP010000012.1 tpg gene 69372 70268 . - . ID=gene-L8R42_001098;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=L8R42_001098 DAFVNP010000012.1 Protein Homology CDS 69372 70268 . - 0 ID=cds-HBQ7389217.1;Parent=gene-L8R42_001098;Dbxref=NCBI_GP:HBQ7389217.1;Name=HBQ7389217.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=L8R42_001098;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=HBQ7389217.1;transl_table=11 DAFVNP010000012.1 tpg gene 70240 70791 . - . ID=gene-L8R42_001099;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=L8R42_001099 DAFVNP010000012.1 Protein Homology CDS 70240 70791 . - 0 ID=cds-HBQ7389218.1;Parent=gene-L8R42_001099;Dbxref=NCBI_GP:HBQ7389218.1;Name=HBQ7389218.1;gbkey=CDS;gene=citX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=L8R42_001099;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=HBQ7389218.1;transl_table=11 DAFVNP010000012.1 tpg gene 70795 72324 . - . ID=gene-L8R42_001100;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=L8R42_001100 DAFVNP010000012.1 Protein Homology CDS 70795 72324 . - 0 ID=cds-HBQ7389219.1;Parent=gene-L8R42_001100;Dbxref=NCBI_GP:HBQ7389219.1;Name=HBQ7389219.1;gbkey=CDS;gene=citF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=L8R42_001100;product=citrate lyase subunit alpha;protein_id=HBQ7389219.1;transl_table=11 DAFVNP010000012.1 tpg gene 72334 73242 . - . ID=gene-L8R42_001101;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=L8R42_001101 DAFVNP010000012.1 Protein Homology CDS 72334 73242 . - 0 ID=cds-HBQ7389220.1;Parent=gene-L8R42_001101;Dbxref=NCBI_GP:HBQ7389220.1;Name=HBQ7389220.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=L8R42_001101;product=citrate (pro-3S)-lyase subunit beta;protein_id=HBQ7389220.1;transl_table=11 DAFVNP010000012.1 tpg gene 73239 73535 . - . ID=gene-L8R42_001102;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=L8R42_001102 DAFVNP010000012.1 Protein Homology CDS 73239 73535 . - 0 ID=cds-HBQ7389221.1;Parent=gene-L8R42_001102;Dbxref=NCBI_GP:HBQ7389221.1;Name=HBQ7389221.1;gbkey=CDS;gene=citD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=L8R42_001102;product=citrate lyase acyl carrier protein;protein_id=HBQ7389221.1;transl_table=11 DAFVNP010000012.1 tpg gene 73532 74608 . - . ID=gene-L8R42_001103;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=L8R42_001103 DAFVNP010000012.1 Protein Homology CDS 73532 74608 . - 0 ID=cds-HBQ7389222.1;Parent=gene-L8R42_001103;Dbxref=NCBI_GP:HBQ7389222.1;Name=HBQ7389222.1;gbkey=CDS;gene=citC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=L8R42_001103;product=[citrate (pro-3S)-lyase] ligase;protein_id=HBQ7389222.1;transl_table=11 DAFVNP010000012.1 tpg gene 74993 76654 . + . ID=gene-L8R42_001104;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=L8R42_001104 DAFVNP010000012.1 Protein Homology CDS 74993 76654 . + 0 ID=cds-HBQ7389223.1;Parent=gene-L8R42_001104;Dbxref=NCBI_GP:HBQ7389223.1;Name=HBQ7389223.1;gbkey=CDS;gene=dpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=L8R42_001104;product=sensor histidine kinase DpiB;protein_id=HBQ7389223.1;transl_table=11 DAFVNP010000012.1 tpg gene 76623 77303 . + . ID=gene-L8R42_001105;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=L8R42_001105 DAFVNP010000012.1 Protein Homology CDS 76623 77303 . + 0 ID=cds-HBQ7389224.1;Parent=gene-L8R42_001105;Dbxref=NCBI_GP:HBQ7389224.1;Name=HBQ7389224.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=L8R42_001105;product=two-component response regulator DpiA;protein_id=HBQ7389224.1;transl_table=11 ##sequence-region DAFVNP010000013.1 1 75635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000013.1 tpg region 1 75635 . + . ID=DAFVNP010000013.1:1..75635;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000013.1 tpg gene 1 139 . - . ID=gene-L8R42_001106;Name=L8R42_001106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001106;partial=true;start_range=.,1 DAFVNP010000013.1 Protein Homology CDS 1 139 . - 0 ID=cds-HBQ7389225.1;Parent=gene-L8R42_001106;Dbxref=NCBI_GP:HBQ7389225.1;Name=HBQ7389225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=L8R42_001106;partial=true;product=HAD hydrolase family protein;protein_id=HBQ7389225.1;start_range=.,1;transl_table=11 DAFVNP010000013.1 tpg gene 401 1666 . + . ID=gene-L8R42_001107;Name=L8R42_001107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001107 DAFVNP010000013.1 Protein Homology CDS 401 1666 . + 0 ID=cds-HBQ7389226.1;Parent=gene-L8R42_001107;Dbxref=NCBI_GP:HBQ7389226.1;Name=HBQ7389226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=L8R42_001107;product=DUF1479 domain-containing protein;protein_id=HBQ7389226.1;transl_table=11 DAFVNP010000013.1 tpg gene 1787 3382 . - . ID=gene-L8R42_001108;Name=L8R42_001108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001108 DAFVNP010000013.1 Protein Homology CDS 1787 3382 . - 0 ID=cds-HBQ7389227.1;Parent=gene-L8R42_001108;Dbxref=NCBI_GP:HBQ7389227.1;Name=HBQ7389227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=L8R42_001108;product=ABC-F family ATPase;protein_id=HBQ7389227.1;transl_table=11 DAFVNP010000013.1 tpg gene 3601 4521 . + . ID=gene-L8R42_001109;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=L8R42_001109 DAFVNP010000013.1 Protein Homology CDS 3601 4521 . + 0 ID=cds-HBQ7389228.1;Parent=gene-L8R42_001109;Dbxref=NCBI_GP:HBQ7389228.1;Name=HBQ7389228.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=L8R42_001109;product=L%2CD-transpeptidase;protein_id=HBQ7389228.1;transl_table=11 DAFVNP010000013.1 tpg gene 4565 5677 . - . ID=gene-L8R42_001110;Name=L8R42_001110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001110 DAFVNP010000013.1 Protein Homology CDS 4565 5677 . - 0 ID=cds-HBQ7389229.1;Parent=gene-L8R42_001110;Dbxref=NCBI_GP:HBQ7389229.1;Name=HBQ7389229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=L8R42_001110;product=anion transporter;protein_id=HBQ7389229.1;transl_table=11 DAFVNP010000013.1 tpg gene 5674 6147 . - . ID=gene-L8R42_001111;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=L8R42_001111 DAFVNP010000013.1 Protein Homology CDS 5674 6147 . - 0 ID=cds-HBQ7389230.1;Parent=gene-L8R42_001111;Dbxref=NCBI_GP:HBQ7389230.1;Name=HBQ7389230.1;gbkey=CDS;gene=mntR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=L8R42_001111;product=manganese-binding transcriptional regulator MntR;protein_id=HBQ7389230.1;transl_table=11 DAFVNP010000013.1 tpg gene 6333 6461 . + . ID=gene-L8R42_001112;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=L8R42_001112 DAFVNP010000013.1 Protein Homology CDS 6333 6461 . + 0 ID=cds-HBQ7389231.1;Parent=gene-L8R42_001112;Dbxref=NCBI_GP:HBQ7389231.1;Name=HBQ7389231.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=L8R42_001112;product=manganase accumulation protein MntS;protein_id=HBQ7389231.1;transl_table=11 DAFVNP010000013.1 tpg gene 6726 8306 . + . ID=gene-L8R42_001113;Name=L8R42_001113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001113 DAFVNP010000013.1 Protein Homology CDS 6726 8306 . + 0 ID=cds-HBQ7389232.1;Parent=gene-L8R42_001113;Dbxref=NCBI_GP:HBQ7389232.1;Name=HBQ7389232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=L8R42_001113;product=phosphoethanolamine transferase;protein_id=HBQ7389232.1;transl_table=11 DAFVNP010000013.1 tpg gene 8369 8884 . - . ID=gene-L8R42_001114;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=L8R42_001114 DAFVNP010000013.1 Protein Homology CDS 8369 8884 . - 0 ID=cds-HBQ7389233.1;Parent=gene-L8R42_001114;Dbxref=NCBI_GP:HBQ7389233.1;Name=HBQ7389233.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=L8R42_001114;product=outer membrane protein OmpX;protein_id=HBQ7389233.1;transl_table=11 DAFVNP010000013.1 tpg gene 9238 10125 . + . ID=gene-L8R42_001115;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=L8R42_001115 DAFVNP010000013.1 Protein Homology CDS 9238 10125 . + 0 ID=cds-HBQ7389234.1;Parent=gene-L8R42_001115;Dbxref=NCBI_GP:HBQ7389234.1;Name=HBQ7389234.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=L8R42_001115;product=threonine/homoserine exporter RhtA;protein_id=HBQ7389234.1;transl_table=11 DAFVNP010000013.1 tpg gene 10428 10931 . + . ID=gene-L8R42_001116;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=L8R42_001116 DAFVNP010000013.1 Protein Homology CDS 10428 10931 . + 0 ID=cds-HBQ7389235.1;Parent=gene-L8R42_001116;Dbxref=NCBI_GP:HBQ7389235.1;Name=HBQ7389235.1;gbkey=CDS;gene=dps;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=L8R42_001116;product=DNA starvation/stationary phase protection protein Dps;protein_id=HBQ7389235.1;transl_table=11 DAFVNP010000013.1 tpg gene 11408 12154 . + . ID=gene-L8R42_001117;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=L8R42_001117 DAFVNP010000013.1 Protein Homology CDS 11408 12154 . + 0 ID=cds-HBQ7389236.1;Parent=gene-L8R42_001117;Dbxref=NCBI_GP:HBQ7389236.1;Name=HBQ7389236.1;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=L8R42_001117;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=HBQ7389236.1;transl_table=11 DAFVNP010000013.1 tpg gene 12300 12959 . + . ID=gene-L8R42_001118;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=L8R42_001118 DAFVNP010000013.1 Protein Homology CDS 12300 12959 . + 0 ID=cds-HBQ7389237.1;Parent=gene-L8R42_001118;Dbxref=NCBI_GP:HBQ7389237.1;Name=HBQ7389237.1;gbkey=CDS;gene=glnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=L8R42_001118;product=glutamine ABC transporter permease GlnP;protein_id=HBQ7389237.1;transl_table=11 DAFVNP010000013.1 tpg gene 12956 13678 . + . ID=gene-L8R42_001119;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=L8R42_001119 DAFVNP010000013.1 Protein Homology CDS 12956 13678 . + 0 ID=cds-HBQ7389238.1;Parent=gene-L8R42_001119;Dbxref=NCBI_GP:HBQ7389238.1;Name=HBQ7389238.1;gbkey=CDS;gene=glnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=L8R42_001119;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=HBQ7389238.1;transl_table=11 DAFVNP010000013.1 tpg gene 13797 16019 . + . ID=gene-L8R42_001120;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=L8R42_001120 DAFVNP010000013.1 Protein Homology CDS 13797 16019 . + 0 ID=cds-HBQ7389239.1;Parent=gene-L8R42_001120;Dbxref=NCBI_GP:HBQ7389239.1;Name=HBQ7389239.1;gbkey=CDS;gene=ybiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=L8R42_001120;product=mechanosensitive channel protein;protein_id=HBQ7389239.1;transl_table=11 DAFVNP010000013.1 tpg gene 16016 16942 . - . ID=gene-L8R42_001121;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=L8R42_001121 DAFVNP010000013.1 Protein Homology CDS 16016 16942 . - 0 ID=cds-HBQ7389240.1;Parent=gene-L8R42_001121;Dbxref=NCBI_GP:HBQ7389240.1;Name=HBQ7389240.1;gbkey=CDS;gene=rlmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=L8R42_001121;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=HBQ7389240.1;transl_table=11 DAFVNP010000013.1 tpg gene 17147 17413 . + . ID=gene-L8R42_001122;Name=L8R42_001122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001122 DAFVNP010000013.1 Protein Homology CDS 17147 17413 . + 0 ID=cds-HBQ7389241.1;Parent=gene-L8R42_001122;Dbxref=NCBI_GP:HBQ7389241.1;Name=HBQ7389241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=L8R42_001122;product=DksA/TraR family C4-type zinc finger protein;protein_id=HBQ7389241.1;transl_table=11 DAFVNP010000013.1 tpg gene 17698 17958 . + . ID=gene-L8R42_001123;Name=L8R42_001123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001123 DAFVNP010000013.1 Protein Homology CDS 17698 17958 . + 0 ID=cds-HBQ7389242.1;Parent=gene-L8R42_001123;Dbxref=NCBI_GP:HBQ7389242.1;Name=HBQ7389242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=L8R42_001123;product=DUF1471 domain-containing protein;protein_id=HBQ7389242.1;transl_table=11 DAFVNP010000013.1 tpg gene 18114 19088 . - . ID=gene-L8R42_001124;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=L8R42_001124 DAFVNP010000013.1 Protein Homology CDS 18114 19088 . - 0 ID=cds-HBQ7389243.1;Parent=gene-L8R42_001124;Dbxref=NCBI_GP:HBQ7389243.1;Name=HBQ7389243.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=L8R42_001124;product=DNA-binding protein YbiB;protein_id=HBQ7389243.1;transl_table=11 DAFVNP010000013.1 tpg gene 19118 21262 . - . ID=gene-L8R42_001125;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=L8R42_001125 DAFVNP010000013.1 Protein Homology CDS 19118 21262 . - 0 ID=cds-HBQ7389244.1;Parent=gene-L8R42_001125;Dbxref=NCBI_GP:HBQ7389244.1;Name=HBQ7389244.1;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=L8R42_001125;product=ATP-dependent DNA helicase DinG;protein_id=HBQ7389244.1;transl_table=11 DAFVNP010000013.1 tpg gene 21470 22831 . - . ID=gene-L8R42_001126;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=L8R42_001126 DAFVNP010000013.1 Protein Homology CDS 21470 22831 . - 0 ID=cds-HBQ7389245.1;Parent=gene-L8R42_001126;Dbxref=NCBI_GP:HBQ7389245.1;Name=HBQ7389245.1;gbkey=CDS;gene=rhlE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=L8R42_001126;product=ATP-dependent RNA helicase RhlE;protein_id=HBQ7389245.1;transl_table=11 DAFVNP010000013.1 tpg gene 23061 23735 . + . ID=gene-L8R42_001127;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=L8R42_001127 DAFVNP010000013.1 Protein Homology CDS 23061 23735 . + 0 ID=cds-HBQ7389246.1;Parent=gene-L8R42_001127;Dbxref=NCBI_GP:HBQ7389246.1;Name=HBQ7389246.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=L8R42_001127;product=transcriptional regulator CecR;protein_id=HBQ7389246.1;transl_table=11 DAFVNP010000013.1 tpg gene 23735 24730 . + . ID=gene-L8R42_001128;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=L8R42_001128 DAFVNP010000013.1 Protein Homology CDS 23735 24730 . + 0 ID=cds-HBQ7389247.1;Parent=gene-L8R42_001128;Dbxref=NCBI_GP:HBQ7389247.1;Name=HBQ7389247.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=L8R42_001128;product=secretion protein HlyD;protein_id=HBQ7389247.1;transl_table=11 DAFVNP010000013.1 tpg gene 24723 26459 . + . ID=gene-L8R42_001129;Name=L8R42_001129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001129 DAFVNP010000013.1 Protein Homology CDS 24723 26459 . + 0 ID=cds-HBQ7389248.1;Parent=gene-L8R42_001129;Dbxref=NCBI_GP:HBQ7389248.1;Name=HBQ7389248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=L8R42_001129;product=ABC transporter ATP-binding protein;protein_id=HBQ7389248.1;transl_table=11 DAFVNP010000013.1 tpg gene 26452 27582 . + . ID=gene-L8R42_001130;Name=L8R42_001130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001130 DAFVNP010000013.1 Protein Homology CDS 26452 27582 . + 0 ID=cds-HBQ7389249.1;Parent=gene-L8R42_001130;Dbxref=NCBI_GP:HBQ7389249.1;Name=HBQ7389249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=L8R42_001130;product=ABC transporter permease;protein_id=HBQ7389249.1;transl_table=11 DAFVNP010000013.1 tpg gene 27698 28804 . + . ID=gene-L8R42_001131;Name=L8R42_001131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001131 DAFVNP010000013.1 Protein Homology CDS 27698 28804 . + 0 ID=cds-HBQ7389250.1;Parent=gene-L8R42_001131;Dbxref=NCBI_GP:HBQ7389250.1;Name=HBQ7389250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=L8R42_001131;product=ABC transporter permease;protein_id=HBQ7389250.1;transl_table=11 DAFVNP010000013.1 tpg gene 28766 29176 . - . ID=gene-L8R42_001132;Name=L8R42_001132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001132 DAFVNP010000013.1 Protein Homology CDS 28766 29176 . - 0 ID=cds-HBQ7389251.1;Parent=gene-L8R42_001132;Dbxref=NCBI_GP:HBQ7389251.1;Name=HBQ7389251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=L8R42_001132;product=YbhQ family protein;protein_id=HBQ7389251.1;transl_table=11 DAFVNP010000013.1 tpg gene 29309 30067 . + . ID=gene-L8R42_001133;Name=L8R42_001133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001133 DAFVNP010000013.1 Protein Homology CDS 29309 30067 . + 0 ID=cds-HBQ7389252.1;Parent=gene-L8R42_001133;Dbxref=NCBI_GP:HBQ7389252.1;Name=HBQ7389252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=L8R42_001133;product=endonuclease/exonuclease/phosphatase family protein;protein_id=HBQ7389252.1;transl_table=11 DAFVNP010000013.1 tpg gene 30064 31305 . + . ID=gene-L8R42_001134;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=L8R42_001134 DAFVNP010000013.1 Protein Homology CDS 30064 31305 . + 0 ID=cds-HBQ7389253.1;Parent=gene-L8R42_001134;Dbxref=NCBI_GP:HBQ7389253.1;Name=HBQ7389253.1;gbkey=CDS;gene=clsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=L8R42_001134;product=cardiolipin synthase ClsB;protein_id=HBQ7389253.1;transl_table=11 DAFVNP010000013.1 tpg gene 31305 32267 . + . ID=gene-L8R42_001135;Name=L8R42_001135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001135 DAFVNP010000013.1 Protein Homology CDS 31305 32267 . + 0 ID=cds-HBQ7389254.1;Parent=gene-L8R42_001135;Dbxref=NCBI_GP:HBQ7389254.1;Name=HBQ7389254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=L8R42_001135;product=UPF0104 family protein;protein_id=HBQ7389254.1;transl_table=11 DAFVNP010000013.1 tpg gene 32270 32830 . - . ID=gene-L8R42_001136;Name=L8R42_001136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001136 DAFVNP010000013.1 Protein Homology CDS 32270 32830 . - 0 ID=cds-HBQ7389255.1;Parent=gene-L8R42_001136;Dbxref=NCBI_GP:HBQ7389255.1;Name=HBQ7389255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=L8R42_001136;product=hypothetical protein;protein_id=HBQ7389255.1;transl_table=11 DAFVNP010000013.1 tpg gene 32838 33446 . - . ID=gene-L8R42_001137;Name=L8R42_001137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001137 DAFVNP010000013.1 Protein Homology CDS 32838 33446 . - 0 ID=cds-HBQ7389256.1;Parent=gene-L8R42_001137;Dbxref=NCBI_GP:HBQ7389256.1;Name=HBQ7389256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=L8R42_001137;product=hypothetical protein;protein_id=HBQ7389256.1;transl_table=11 DAFVNP010000013.1 tpg gene 33470 34177 . - . ID=gene-L8R42_001138;Name=L8R42_001138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001138 DAFVNP010000013.1 Protein Homology CDS 33470 34177 . - 0 ID=cds-HBQ7389257.1;Parent=gene-L8R42_001138;Dbxref=NCBI_GP:HBQ7389257.1;Name=HBQ7389257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=L8R42_001138;product=Bax inhibitor-1/YccA family protein;protein_id=HBQ7389257.1;transl_table=11 DAFVNP010000013.1 tpg gene 34323 35027 . - . ID=gene-L8R42_001139;Name=L8R42_001139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001139 DAFVNP010000013.1 Protein Homology CDS 34323 35027 . - 0 ID=cds-HBQ7389258.1;Parent=gene-L8R42_001139;Dbxref=NCBI_GP:HBQ7389258.1;Name=HBQ7389258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=L8R42_001139;product=Bax inhibitor-1/YccA family protein;protein_id=HBQ7389258.1;transl_table=11 DAFVNP010000013.1 tpg gene 35075 35527 . - . ID=gene-L8R42_001140;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=L8R42_001140 DAFVNP010000013.1 Protein Homology CDS 35075 35527 . - 0 ID=cds-HBQ7389259.1;Parent=gene-L8R42_001140;Dbxref=NCBI_GP:HBQ7389259.1;Name=HBQ7389259.1;gbkey=CDS;gene=moaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=L8R42_001140;product=molybdopterin synthase catalytic subunit MoaE;protein_id=HBQ7389259.1;transl_table=11 DAFVNP010000013.1 tpg gene 35529 35774 . - . ID=gene-L8R42_001141;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=L8R42_001141 DAFVNP010000013.1 Protein Homology CDS 35529 35774 . - 0 ID=cds-HBQ7389260.1;Parent=gene-L8R42_001141;Dbxref=NCBI_GP:HBQ7389260.1;Name=HBQ7389260.1;gbkey=CDS;gene=moaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=L8R42_001141;product=molybdopterin synthase sulfur carrier subunit;protein_id=HBQ7389260.1;transl_table=11 DAFVNP010000013.1 tpg gene 35767 36252 . - . ID=gene-L8R42_001142;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=L8R42_001142 DAFVNP010000013.1 Protein Homology CDS 35767 36252 . - 0 ID=cds-HBQ7389261.1;Parent=gene-L8R42_001142;Dbxref=NCBI_GP:HBQ7389261.1;Name=HBQ7389261.1;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=L8R42_001142;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=HBQ7389261.1;transl_table=11 DAFVNP010000013.1 tpg gene 36255 36767 . - . ID=gene-L8R42_001143;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=L8R42_001143 DAFVNP010000013.1 Protein Homology CDS 36255 36767 . - 0 ID=cds-HBQ7389262.1;Parent=gene-L8R42_001143;Dbxref=NCBI_GP:HBQ7389262.1;Name=HBQ7389262.1;gbkey=CDS;gene=moaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=L8R42_001143;product=molybdenum cofactor biosynthesis protein B;protein_id=HBQ7389262.1;transl_table=11 DAFVNP010000013.1 tpg gene 36789 37778 . - . ID=gene-L8R42_001144;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=L8R42_001144 DAFVNP010000013.1 Protein Homology CDS 36789 37778 . - 0 ID=cds-HBQ7389263.1;Parent=gene-L8R42_001144;Dbxref=NCBI_GP:HBQ7389263.1;Name=HBQ7389263.1;gbkey=CDS;gene=moaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=L8R42_001144;product=GTP 3'%2C8-cyclase MoaA;protein_id=HBQ7389263.1;transl_table=11 DAFVNP010000013.1 cmsearch riboswitch 37766 37910 . - . ID=id-DAFVNP010000013.1:37766..37910;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch DAFVNP010000013.1 tpg gene 38175 39083 . + . ID=gene-L8R42_001145;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=L8R42_001145 DAFVNP010000013.1 Protein Homology CDS 38175 39083 . + 0 ID=cds-HBQ7389264.1;Parent=gene-L8R42_001145;Dbxref=NCBI_GP:HBQ7389264.1;Name=HBQ7389264.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=L8R42_001145;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=HBQ7389264.1;transl_table=11 DAFVNP010000013.1 tpg gene 39179 41446 . - . ID=gene-L8R42_001146;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=L8R42_001146 DAFVNP010000013.1 Protein Homology CDS 39179 41446 . - 0 ID=cds-HBQ7389265.1;Parent=gene-L8R42_001146;Dbxref=NCBI_GP:HBQ7389265.1;Name=HBQ7389265.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=L8R42_001146;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=HBQ7389265.1;transl_table=11 DAFVNP010000013.1 tpg pseudogene 41454 41627 . - . ID=gene-L8R42_001147;Name=L8R42_001147;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001147;pseudo=true DAFVNP010000013.1 Protein Homology CDS 41454 41627 . - 0 ID=cds-L8R42_001147;Parent=gene-L8R42_001147;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=L8R42_001147;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000013.1 tpg gene 41935 43956 . - . ID=gene-L8R42_001148;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=L8R42_001148 DAFVNP010000013.1 Protein Homology CDS 41935 43956 . - 0 ID=cds-HBQ7389266.1;Parent=gene-L8R42_001148;Dbxref=NCBI_GP:HBQ7389266.1;Name=HBQ7389266.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=L8R42_001148;product=excinuclease ABC subunit B;protein_id=HBQ7389266.1;transl_table=11 DAFVNP010000013.1 tpg gene 44607 45293 . - . ID=gene-L8R42_001149;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=L8R42_001149 DAFVNP010000013.1 Protein Homology CDS 44607 45293 . - 0 ID=cds-HBQ7389267.1;Parent=gene-L8R42_001149;Dbxref=NCBI_GP:HBQ7389267.1;Name=HBQ7389267.1;gbkey=CDS;gene=bioD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=L8R42_001149;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=HBQ7389267.1;transl_table=11 DAFVNP010000013.1 tpg gene 45286 46041 . - . ID=gene-L8R42_001150;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=L8R42_001150 DAFVNP010000013.1 Protein Homology CDS 45286 46041 . - 0 ID=cds-HBQ7389268.1;Parent=gene-L8R42_001150;Dbxref=NCBI_GP:HBQ7389268.1;Name=HBQ7389268.1;gbkey=CDS;gene=bioC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=L8R42_001150;product=malonyl-ACP O-methyltransferase BioC;protein_id=HBQ7389268.1;transl_table=11 DAFVNP010000013.1 tpg gene 46025 47182 . - . ID=gene-L8R42_001151;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=L8R42_001151 DAFVNP010000013.1 Protein Homology CDS 46025 47182 . - 0 ID=cds-HBQ7389269.1;Parent=gene-L8R42_001151;Dbxref=NCBI_GP:HBQ7389269.1;Name=HBQ7389269.1;gbkey=CDS;gene=bioF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=L8R42_001151;product=8-amino-7-oxononanoate synthase;protein_id=HBQ7389269.1;transl_table=11 DAFVNP010000013.1 tpg gene 47179 48219 . - . ID=gene-L8R42_001152;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=L8R42_001152 DAFVNP010000013.1 Protein Homology CDS 47179 48219 . - 0 ID=cds-HBQ7389270.1;Parent=gene-L8R42_001152;Dbxref=NCBI_GP:HBQ7389270.1;Name=HBQ7389270.1;gbkey=CDS;gene=bioB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=L8R42_001152;product=biotin synthase BioB;protein_id=HBQ7389270.1;transl_table=11 DAFVNP010000013.1 tpg gene 48306 49595 . + . ID=gene-L8R42_001153;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=L8R42_001153 DAFVNP010000013.1 Protein Homology CDS 48306 49595 . + 0 ID=cds-HBQ7389271.1;Parent=gene-L8R42_001153;Dbxref=NCBI_GP:HBQ7389271.1;Name=HBQ7389271.1;gbkey=CDS;gene=bioA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=L8R42_001153;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=HBQ7389271.1;transl_table=11 DAFVNP010000013.1 tpg gene 49653 50129 . + . ID=gene-L8R42_001154;Name=L8R42_001154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001154 DAFVNP010000013.1 Protein Homology CDS 49653 50129 . + 0 ID=cds-HBQ7389272.1;Parent=gene-L8R42_001154;Dbxref=NCBI_GP:HBQ7389272.1;Name=HBQ7389272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=L8R42_001154;product=kinase inhibitor;protein_id=HBQ7389272.1;transl_table=11 DAFVNP010000013.1 tpg gene 50214 51734 . - . ID=gene-L8R42_001155;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=L8R42_001155 DAFVNP010000013.1 Protein Homology CDS 50214 51734 . - 0 ID=cds-HBQ7389273.1;Parent=gene-L8R42_001155;Dbxref=NCBI_GP:HBQ7389273.1;Name=HBQ7389273.1;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=L8R42_001155;product=histidine ammonia-lyase;protein_id=HBQ7389273.1;transl_table=11 DAFVNP010000013.1 tpg gene 51736 53421 . - . ID=gene-L8R42_001156;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=L8R42_001156 DAFVNP010000013.1 Protein Homology CDS 51736 53421 . - 0 ID=cds-HBQ7389274.1;Parent=gene-L8R42_001156;Dbxref=NCBI_GP:HBQ7389274.1;Name=HBQ7389274.1;gbkey=CDS;gene=hutU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=L8R42_001156;product=urocanate hydratase;protein_id=HBQ7389274.1;transl_table=11 DAFVNP010000013.1 tpg gene 53618 54343 . - . ID=gene-L8R42_001157;Name=L8R42_001157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001157 DAFVNP010000013.1 Protein Homology CDS 53618 54343 . - 0 ID=cds-HBQ7389275.1;Parent=gene-L8R42_001157;Dbxref=NCBI_GP:HBQ7389275.1;Name=HBQ7389275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=L8R42_001157;product=histidine utilization repressor;protein_id=HBQ7389275.1;transl_table=11 DAFVNP010000013.1 tpg gene 54388 55329 . - . ID=gene-L8R42_001158;Name=L8R42_001158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001158 DAFVNP010000013.1 Protein Homology CDS 54388 55329 . - 0 ID=cds-HBQ7389276.1;Parent=gene-L8R42_001158;Dbxref=NCBI_GP:HBQ7389276.1;Name=HBQ7389276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=L8R42_001158;product=formimidoylglutamase;protein_id=HBQ7389276.1;transl_table=11 DAFVNP010000013.1 tpg gene 55326 56549 . - . ID=gene-L8R42_001159;Name=L8R42_001159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001159 DAFVNP010000013.1 Protein Homology CDS 55326 56549 . - 0 ID=cds-HBQ7389277.1;Parent=gene-L8R42_001159;Dbxref=NCBI_GP:HBQ7389277.1;Name=HBQ7389277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=L8R42_001159;product=imidazolonepropionase;protein_id=HBQ7389277.1;transl_table=11 DAFVNP010000013.1 tpg gene 56787 58070 . + . ID=gene-L8R42_001160;Name=L8R42_001160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001160 DAFVNP010000013.1 Protein Homology CDS 56787 58070 . + 0 ID=cds-HBQ7389278.1;Parent=gene-L8R42_001160;Dbxref=NCBI_GP:HBQ7389278.1;Name=HBQ7389278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=L8R42_001160;product=putative acyl-CoA thioester hydrolase;protein_id=HBQ7389278.1;transl_table=11 DAFVNP010000013.1 tpg gene 58194 59189 . - . ID=gene-L8R42_001161;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=L8R42_001161 DAFVNP010000013.1 Protein Homology CDS 58194 59189 . - 0 ID=cds-HBQ7389279.1;Parent=gene-L8R42_001161;Dbxref=NCBI_GP:HBQ7389279.1;Name=HBQ7389279.1;gbkey=CDS;gene=pgl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=L8R42_001161;product=6-phosphogluconolactonase;protein_id=HBQ7389279.1;transl_table=11 DAFVNP010000013.1 tpg gene 59353 60171 . + . ID=gene-L8R42_001162;Name=L8R42_001162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001162 DAFVNP010000013.1 Protein Homology CDS 59353 60171 . + 0 ID=cds-HBQ7389280.1;Parent=gene-L8R42_001162;Dbxref=NCBI_GP:HBQ7389280.1;Name=HBQ7389280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=L8R42_001162;product=pyridoxal phosphatase;protein_id=HBQ7389280.1;transl_table=11 DAFVNP010000013.1 tpg gene 60172 61230 . - . ID=gene-L8R42_001163;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=L8R42_001163 DAFVNP010000013.1 Protein Homology CDS 60172 61230 . - 0 ID=cds-HBQ7389281.1;Parent=gene-L8R42_001163;Dbxref=NCBI_GP:HBQ7389281.1;Name=HBQ7389281.1;gbkey=CDS;gene=modC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=L8R42_001163;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=HBQ7389281.1;transl_table=11 DAFVNP010000013.1 tpg gene 61233 61922 . - . ID=gene-L8R42_001164;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=L8R42_001164 DAFVNP010000013.1 Protein Homology CDS 61233 61922 . - 0 ID=cds-HBQ7389282.1;Parent=gene-L8R42_001164;Dbxref=NCBI_GP:HBQ7389282.1;Name=HBQ7389282.1;gbkey=CDS;gene=modB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=L8R42_001164;product=molybdate ABC transporter permease subunit;protein_id=HBQ7389282.1;transl_table=11 DAFVNP010000013.1 tpg gene 61922 62695 . - . ID=gene-L8R42_001165;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=L8R42_001165 DAFVNP010000013.1 Protein Homology CDS 61922 62695 . - 0 ID=cds-HBQ7389283.1;Parent=gene-L8R42_001165;Dbxref=NCBI_GP:HBQ7389283.1;Name=HBQ7389283.1;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=L8R42_001165;product=molybdate ABC transporter substrate-binding protein;protein_id=HBQ7389283.1;transl_table=11 DAFVNP010000013.1 tpg gene 62862 63011 . - . ID=gene-L8R42_001166;Name=L8R42_001166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001166 DAFVNP010000013.1 Protein Homology CDS 62862 63011 . - 0 ID=cds-HBQ7389284.1;Parent=gene-L8R42_001166;Dbxref=NCBI_GP:HBQ7389284.1;Name=HBQ7389284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=L8R42_001166;product=AcrZ family multidrug efflux pump-associated protein;protein_id=HBQ7389284.1;transl_table=11 DAFVNP010000013.1 tpg gene 63140 63928 . + . ID=gene-L8R42_001167;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=L8R42_001167 DAFVNP010000013.1 Protein Homology CDS 63140 63928 . + 0 ID=cds-HBQ7389285.1;Parent=gene-L8R42_001167;Dbxref=NCBI_GP:HBQ7389285.1;Name=HBQ7389285.1;gbkey=CDS;gene=modE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=L8R42_001167;product=molybdenum-dependent transcriptional regulator;protein_id=HBQ7389285.1;transl_table=11 DAFVNP010000013.1 tpg gene 63996 65471 . + . ID=gene-L8R42_001168;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=L8R42_001168 DAFVNP010000013.1 Protein Homology CDS 63996 65471 . + 0 ID=cds-HBQ7389286.1;Parent=gene-L8R42_001168;Dbxref=NCBI_GP:HBQ7389286.1;Name=HBQ7389286.1;gbkey=CDS;gene=modF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=L8R42_001168;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=HBQ7389286.1;transl_table=11 DAFVNP010000013.1 tpg gene 65642 66550 . + . ID=gene-L8R42_001169;Name=L8R42_001169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001169 DAFVNP010000013.1 Protein Homology CDS 65642 66550 . + 0 ID=cds-HBQ7389287.1;Parent=gene-L8R42_001169;Dbxref=NCBI_GP:HBQ7389287.1;Name=HBQ7389287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=L8R42_001169;product=DUF2167 domain-containing protein;protein_id=HBQ7389287.1;transl_table=11 DAFVNP010000013.1 tpg gene 66773 67789 . + . ID=gene-L8R42_001170;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=L8R42_001170 DAFVNP010000013.1 Protein Homology CDS 66773 67789 . + 0 ID=cds-HBQ7389288.1;Parent=gene-L8R42_001170;Dbxref=NCBI_GP:HBQ7389288.1;Name=HBQ7389288.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=L8R42_001170;product=UDP-glucose 4-epimerase GalE;protein_id=HBQ7389288.1;transl_table=11 DAFVNP010000013.1 tpg gene 67800 68846 . + . ID=gene-L8R42_001171;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=L8R42_001171 DAFVNP010000013.1 Protein Homology CDS 67800 68846 . + 0 ID=cds-HBQ7389289.1;Parent=gene-L8R42_001171;Dbxref=NCBI_GP:HBQ7389289.1;Name=HBQ7389289.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=L8R42_001171;product=galactose-1-phosphate uridylyltransferase;protein_id=HBQ7389289.1;transl_table=11 DAFVNP010000013.1 tpg gene 68849 69997 . + . ID=gene-L8R42_001172;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=L8R42_001172 DAFVNP010000013.1 Protein Homology CDS 68849 69997 . + 0 ID=cds-HBQ7389290.1;Parent=gene-L8R42_001172;Dbxref=NCBI_GP:HBQ7389290.1;Name=HBQ7389290.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=L8R42_001172;product=galactokinase;protein_id=HBQ7389290.1;transl_table=11 DAFVNP010000013.1 tpg gene 69991 71031 . + . ID=gene-L8R42_001173;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=L8R42_001173 DAFVNP010000013.1 Protein Homology CDS 69991 71031 . + 0 ID=cds-HBQ7389291.1;Parent=gene-L8R42_001173;Dbxref=NCBI_GP:HBQ7389291.1;Name=HBQ7389291.1;gbkey=CDS;gene=galM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=L8R42_001173;product=galactose-1-epimerase;protein_id=HBQ7389291.1;transl_table=11 DAFVNP010000013.1 tpg gene 71255 72007 . + . ID=gene-L8R42_001174;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=L8R42_001174 DAFVNP010000013.1 Protein Homology CDS 71255 72007 . + 0 ID=cds-HBQ7389292.1;Parent=gene-L8R42_001174;Dbxref=NCBI_GP:HBQ7389292.1;Name=HBQ7389292.1;gbkey=CDS;gene=gpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=L8R42_001174;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=HBQ7389292.1;transl_table=11 DAFVNP010000013.1 tpg gene 72098 72874 . - . ID=gene-L8R42_001175;Name=L8R42_001175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001175 DAFVNP010000013.1 Protein Homology CDS 72098 72874 . - 0 ID=cds-HBQ7389293.1;Parent=gene-L8R42_001175;Dbxref=NCBI_GP:HBQ7389293.1;Name=HBQ7389293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=L8R42_001175;product=ABC transporter ATP-binding protein;protein_id=HBQ7389293.1;transl_table=11 DAFVNP010000013.1 tpg gene 72874 73953 . - . ID=gene-L8R42_001176;Name=L8R42_001176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001176 DAFVNP010000013.1 Protein Homology CDS 72874 73953 . - 0 ID=cds-HBQ7389294.1;Parent=gene-L8R42_001176;Dbxref=NCBI_GP:HBQ7389294.1;Name=HBQ7389294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=L8R42_001176;product=iron ABC transporter permease;protein_id=HBQ7389294.1;transl_table=11 DAFVNP010000013.1 tpg gene 74333 75031 . - . ID=gene-L8R42_001177;Name=L8R42_001177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001177 DAFVNP010000013.1 Protein Homology CDS 74333 75031 . - 0 ID=cds-HBQ7389295.1;Parent=gene-L8R42_001177;Dbxref=NCBI_GP:HBQ7389295.1;Name=HBQ7389295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=L8R42_001177;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=HBQ7389295.1;transl_table=11 DAFVNP010000013.1 tpg gene 75150 75635 . - . ID=gene-L8R42_001178;Name=L8R42_001178;end_range=75635,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001178;partial=true DAFVNP010000013.1 Protein Homology CDS 75150 75635 . - 0 ID=cds-HBQ7389296.1;Parent=gene-L8R42_001178;Dbxref=NCBI_GP:HBQ7389296.1;Name=HBQ7389296.1;end_range=75635,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=L8R42_001178;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=HBQ7389296.1;transl_table=11 ##sequence-region DAFVNP010000014.1 1 73579 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000014.1 tpg region 1 73579 . + . ID=DAFVNP010000014.1:1..73579;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000014.1 tpg gene 179 574 . + . ID=gene-L8R42_001179;Name=L8R42_001179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001179 DAFVNP010000014.1 Protein Homology CDS 179 574 . + 0 ID=cds-HBQ7389297.1;Parent=gene-L8R42_001179;Dbxref=NCBI_GP:HBQ7389297.1;Name=HBQ7389297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=L8R42_001179;product=DUF1398 domain-containing protein;protein_id=HBQ7389297.1;transl_table=11 DAFVNP010000014.1 tpg gene 903 1379 . + . ID=gene-L8R42_001180;Name=L8R42_001180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001180 DAFVNP010000014.1 Protein Homology CDS 903 1379 . + 0 ID=cds-HBQ7389298.1;Parent=gene-L8R42_001180;Dbxref=NCBI_GP:HBQ7389298.1;Name=HBQ7389298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=L8R42_001180;product=hypothetical protein;protein_id=HBQ7389298.1;transl_table=11 DAFVNP010000014.1 tpg pseudogene 1600 1808 . - . ID=gene-L8R42_001181;Name=L8R42_001181;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001181;pseudo=true DAFVNP010000014.1 Protein Homology CDS 1600 1808 . - 0 ID=cds-L8R42_001181;Parent=gene-L8R42_001181;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974708.1;locus_tag=L8R42_001181;product=CZB domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000014.1 tpg gene 2715 2915 . + . ID=gene-L8R42_001182;Name=L8R42_001182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001182 DAFVNP010000014.1 GeneMarkS-2+ CDS 2715 2915 . + 0 ID=cds-HBQ7389299.1;Parent=gene-L8R42_001182;Dbxref=NCBI_GP:HBQ7389299.1;Name=HBQ7389299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_001182;product=hypothetical protein;protein_id=HBQ7389299.1;transl_table=11 DAFVNP010000014.1 tpg gene 2967 3251 . + . ID=gene-L8R42_001183;Name=L8R42_001183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001183 DAFVNP010000014.1 Protein Homology CDS 2967 3251 . + 0 ID=cds-HBQ7389300.1;Parent=gene-L8R42_001183;Dbxref=NCBI_GP:HBQ7389300.1;Name=HBQ7389300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143844.1;locus_tag=L8R42_001183;product=hypothetical protein;protein_id=HBQ7389300.1;transl_table=11 DAFVNP010000014.1 tpg gene 3435 3638 . + . ID=gene-L8R42_001184;Name=L8R42_001184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001184 DAFVNP010000014.1 Protein Homology CDS 3435 3638 . + 0 ID=cds-HBQ7389301.1;Parent=gene-L8R42_001184;Dbxref=NCBI_GP:HBQ7389301.1;Name=HBQ7389301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774038.1;locus_tag=L8R42_001184;product=fimbrial protein;protein_id=HBQ7389301.1;transl_table=11 DAFVNP010000014.1 tpg gene 4335 5348 . + . ID=gene-L8R42_001185;Name=L8R42_001185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001185 DAFVNP010000014.1 Protein Homology CDS 4335 5348 . + 0 ID=cds-HBQ7389302.1;Parent=gene-L8R42_001185;Dbxref=NCBI_GP:HBQ7389302.1;Name=HBQ7389302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808191.1;locus_tag=L8R42_001185;product=acyltransferase family protein;protein_id=HBQ7389302.1;transl_table=11 DAFVNP010000014.1 tpg pseudogene 5467 6205 . + . ID=gene-L8R42_001186;Name=L8R42_001186;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001186;pseudo=true DAFVNP010000014.1 Protein Homology CDS 5467 6205 . + 0 ID=cds-L8R42_001186;Parent=gene-L8R42_001186;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=L8R42_001186;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DAFVNP010000014.1 tpg pseudogene 6886 7976 . + . ID=gene-L8R42_001187;Name=L8R42_001187;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001187;pseudo=true DAFVNP010000014.1 Protein Homology CDS 6886 7976 . + 0 ID=cds-L8R42_001187;Parent=gene-L8R42_001187;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227846.1;locus_tag=L8R42_001187;product=lipopolysaccharide N-acetylglucosaminyltransferase;pseudo=true;transl_table=11 DAFVNP010000014.1 tpg gene 8211 8630 . - . ID=gene-L8R42_001188;Name=L8R42_001188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001188 DAFVNP010000014.1 Protein Homology CDS 8211 8630 . - 0 ID=cds-HBQ7389303.1;Parent=gene-L8R42_001188;Dbxref=NCBI_GP:HBQ7389303.1;Name=HBQ7389303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=L8R42_001188;product=GNAT family N-acetyltransferase;protein_id=HBQ7389303.1;transl_table=11 DAFVNP010000014.1 tpg gene 8759 8959 . - . ID=gene-L8R42_001189;Name=L8R42_001189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001189 DAFVNP010000014.1 Protein Homology CDS 8759 8959 . - 0 ID=cds-HBQ7389304.1;Parent=gene-L8R42_001189;Dbxref=NCBI_GP:HBQ7389304.1;Name=HBQ7389304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007801.1;locus_tag=L8R42_001189;product=hypothetical protein;protein_id=HBQ7389304.1;transl_table=11 DAFVNP010000014.1 tpg pseudogene 8999 9267 . + . ID=gene-L8R42_001190;Name=L8R42_001190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001190;pseudo=true DAFVNP010000014.1 Protein Homology CDS 8999 9267 . + 0 ID=cds-L8R42_001190;Parent=gene-L8R42_001190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=L8R42_001190;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000014.1 tpg gene 9433 9573 . + . ID=gene-L8R42_001191;Name=L8R42_001191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001191 DAFVNP010000014.1 Protein Homology CDS 9433 9573 . + 0 ID=cds-HBQ7389305.1;Parent=gene-L8R42_001191;Dbxref=NCBI_GP:HBQ7389305.1;Name=HBQ7389305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460815.3;locus_tag=L8R42_001191;product=hypothetical protein;protein_id=HBQ7389305.1;transl_table=11 DAFVNP010000014.1 tpg pseudogene 9719 10247 . - . ID=gene-L8R42_001192;Name=L8R42_001192;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001192;pseudo=true DAFVNP010000014.1 Protein Homology CDS 9719 10247 . - 0 ID=cds-L8R42_001192;Parent=gene-L8R42_001192;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=L8R42_001192;product=transposase;pseudo=true;transl_table=11 DAFVNP010000014.1 tpg pseudogene 10254 10364 . - . ID=gene-L8R42_001193;Name=L8R42_001193;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001193;pseudo=true DAFVNP010000014.1 Protein Homology CDS 10254 10364 . - 0 ID=cds-L8R42_001193;Parent=gene-L8R42_001193;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=L8R42_001193;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000014.1 tpg gene 10389 12323 . - . ID=gene-L8R42_001194;Name=L8R42_001194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001194 DAFVNP010000014.1 Protein Homology CDS 10389 12323 . - 0 ID=cds-HBQ7389306.1;Parent=gene-L8R42_001194;Dbxref=NCBI_GP:HBQ7389306.1;Name=HBQ7389306.1;Note=secreted by salmonella pathogenicity island 2%3B involved in survival of Salmonella in host cells%3B interferes with host cell ubiquination pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663860.1;locus_tag=L8R42_001194;product=E3 ubiquitin--protein ligase;protein_id=HBQ7389306.1;transl_table=11 DAFVNP010000014.1 tpg gene 12443 12577 . - . ID=gene-L8R42_001195;Name=L8R42_001195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001195 DAFVNP010000014.1 Protein Homology CDS 12443 12577 . - 0 ID=cds-HBQ7389307.1;Parent=gene-L8R42_001195;Dbxref=NCBI_GP:HBQ7389307.1;Name=HBQ7389307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747902.1;locus_tag=L8R42_001195;product=phage tail protein;protein_id=HBQ7389307.1;transl_table=11 DAFVNP010000014.1 tpg pseudogene 12592 12939 . + . ID=gene-L8R42_001196;Name=L8R42_001196;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001196;pseudo=true DAFVNP010000014.1 Protein Homology CDS 12592 12939 . + 0 ID=cds-L8R42_001196;Parent=gene-L8R42_001196;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=L8R42_001196;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DAFVNP010000014.1 tpg gene 13313 13666 . - . ID=gene-L8R42_001197;Name=L8R42_001197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001197 DAFVNP010000014.1 Protein Homology CDS 13313 13666 . - 0 ID=cds-HBQ7389308.1;Parent=gene-L8R42_001197;Dbxref=NCBI_GP:HBQ7389308.1;Name=HBQ7389308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=L8R42_001197;product=YebY family protein;protein_id=HBQ7389308.1;transl_table=11 DAFVNP010000014.1 tpg gene 13683 14558 . - . ID=gene-L8R42_001198;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=L8R42_001198 DAFVNP010000014.1 Protein Homology CDS 13683 14558 . - 0 ID=cds-HBQ7389309.1;Parent=gene-L8R42_001198;Dbxref=NCBI_GP:HBQ7389309.1;Name=HBQ7389309.1;gbkey=CDS;gene=copD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=L8R42_001198;product=copper homeostasis membrane protein CopD;protein_id=HBQ7389309.1;transl_table=11 DAFVNP010000014.1 tpg gene 14559 14933 . - . ID=gene-L8R42_001199;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=L8R42_001199 DAFVNP010000014.1 Protein Homology CDS 14559 14933 . - 0 ID=cds-HBQ7389310.1;Parent=gene-L8R42_001199;Dbxref=NCBI_GP:HBQ7389310.1;Name=HBQ7389310.1;gbkey=CDS;gene=yobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=L8R42_001199;product=CopC domain-containing protein YobA;protein_id=HBQ7389310.1;transl_table=11 DAFVNP010000014.1 tpg gene 15071 15301 . + . ID=gene-L8R42_001200;Name=L8R42_001200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001200 DAFVNP010000014.1 Protein Homology CDS 15071 15301 . + 0 ID=cds-HBQ7389311.1;Parent=gene-L8R42_001200;Dbxref=NCBI_GP:HBQ7389311.1;Name=HBQ7389311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=L8R42_001200;product=DNA polymerase III subunit theta;protein_id=HBQ7389311.1;transl_table=11 DAFVNP010000014.1 tpg gene 15409 16065 . + . ID=gene-L8R42_001201;Name=L8R42_001201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001201 DAFVNP010000014.1 Protein Homology CDS 15409 16065 . + 0 ID=cds-HBQ7389312.1;Parent=gene-L8R42_001201;Dbxref=NCBI_GP:HBQ7389312.1;Name=HBQ7389312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=L8R42_001201;product=carbon-nitrogen hydrolase family protein;protein_id=HBQ7389312.1;transl_table=11 DAFVNP010000014.1 tpg gene 16089 16787 . + . ID=gene-L8R42_001202;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=L8R42_001202 DAFVNP010000014.1 Protein Homology CDS 16089 16787 . + 0 ID=cds-HBQ7389313.1;Parent=gene-L8R42_001202;Dbxref=NCBI_GP:HBQ7389313.1;Name=HBQ7389313.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=L8R42_001202;product=exodeoxyribonuclease X;protein_id=HBQ7389313.1;transl_table=11 DAFVNP010000014.1 tpg gene 16822 18873 . - . ID=gene-L8R42_001203;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=L8R42_001203 DAFVNP010000014.1 Protein Homology CDS 16822 18873 . - 0 ID=cds-HBQ7389314.1;Parent=gene-L8R42_001203;Dbxref=NCBI_GP:HBQ7389314.1;Name=HBQ7389314.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=L8R42_001203;product=oligopeptidase B;protein_id=HBQ7389314.1;transl_table=11 DAFVNP010000014.1 tpg gene 19086 19745 . - . ID=gene-L8R42_001204;Name=L8R42_001204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001204 DAFVNP010000014.1 Protein Homology CDS 19086 19745 . - 0 ID=cds-HBQ7389315.1;Parent=gene-L8R42_001204;Dbxref=NCBI_GP:HBQ7389315.1;Name=HBQ7389315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=L8R42_001204;product=tellurite resistance TerB family protein;protein_id=HBQ7389315.1;transl_table=11 DAFVNP010000014.1 tpg gene 19839 20192 . - . ID=gene-L8R42_001205;Name=L8R42_001205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001205 DAFVNP010000014.1 Protein Homology CDS 19839 20192 . - 0 ID=cds-HBQ7389316.1;Parent=gene-L8R42_001205;Dbxref=NCBI_GP:HBQ7389316.1;Name=HBQ7389316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=L8R42_001205;product=protein YebF;protein_id=HBQ7389316.1;transl_table=11 DAFVNP010000014.1 tpg gene 20260 20550 . - . ID=gene-L8R42_001206;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=L8R42_001206 DAFVNP010000014.1 Protein Homology CDS 20260 20550 . - 0 ID=cds-HBQ7389317.1;Parent=gene-L8R42_001206;Dbxref=NCBI_GP:HBQ7389317.1;Name=HBQ7389317.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=L8R42_001206;product=DNA damage-inducible protein YebG;protein_id=HBQ7389317.1;transl_table=11 DAFVNP010000014.1 tpg gene 20681 21859 . + . ID=gene-L8R42_001207;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=L8R42_001207 DAFVNP010000014.1 Protein Homology CDS 20681 21859 . + 0 ID=cds-HBQ7389318.1;Parent=gene-L8R42_001207;Dbxref=NCBI_GP:HBQ7389318.1;Name=HBQ7389318.1;gbkey=CDS;gene=purT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=L8R42_001207;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=HBQ7389318.1;transl_table=11 DAFVNP010000014.1 tpg gene 21959 22600 . - . ID=gene-L8R42_001208;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=L8R42_001208 DAFVNP010000014.1 Protein Homology CDS 21959 22600 . - 0 ID=cds-HBQ7389319.1;Parent=gene-L8R42_001208;Dbxref=NCBI_GP:HBQ7389319.1;Name=HBQ7389319.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=L8R42_001208;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=HBQ7389319.1;transl_table=11 DAFVNP010000014.1 tpg gene 22638 24449 . - . ID=gene-L8R42_001209;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=L8R42_001209 DAFVNP010000014.1 Protein Homology CDS 22638 24449 . - 0 ID=cds-HBQ7389320.1;Parent=gene-L8R42_001209;Dbxref=NCBI_GP:HBQ7389320.1;Name=HBQ7389320.1;gbkey=CDS;gene=edd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=L8R42_001209;product=phosphogluconate dehydratase;protein_id=HBQ7389320.1;transl_table=11 DAFVNP010000014.1 tpg gene 24684 26159 . - . ID=gene-L8R42_001210;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=L8R42_001210 DAFVNP010000014.1 Protein Homology CDS 24684 26159 . - 0 ID=cds-HBQ7389321.1;Parent=gene-L8R42_001210;Dbxref=NCBI_GP:HBQ7389321.1;Name=HBQ7389321.1;gbkey=CDS;gene=zwf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=L8R42_001210;product=glucose-6-phosphate dehydrogenase;protein_id=HBQ7389321.1;transl_table=11 DAFVNP010000014.1 tpg gene 26501 27370 . + . ID=gene-L8R42_001211;Name=L8R42_001211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001211 DAFVNP010000014.1 Protein Homology CDS 26501 27370 . + 0 ID=cds-HBQ7389322.1;Parent=gene-L8R42_001211;Dbxref=NCBI_GP:HBQ7389322.1;Name=HBQ7389322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=L8R42_001211;product=MurR/RpiR family transcriptional regulator;protein_id=HBQ7389322.1;transl_table=11 DAFVNP010000014.1 tpg gene 27494 28936 . + . ID=gene-L8R42_001212;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=L8R42_001212 DAFVNP010000014.1 Protein Homology CDS 27494 28936 . + 0 ID=cds-HBQ7389323.1;Parent=gene-L8R42_001212;Dbxref=NCBI_GP:HBQ7389323.1;Name=HBQ7389323.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=L8R42_001212;product=pyruvate kinase;protein_id=HBQ7389323.1;transl_table=11 DAFVNP010000014.1 tpg gene 29009 29980 . - . ID=gene-L8R42_001213;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=L8R42_001213 DAFVNP010000014.1 Protein Homology CDS 29009 29980 . - 0 ID=cds-HBQ7389324.1;Parent=gene-L8R42_001213;Dbxref=NCBI_GP:HBQ7389324.1;Name=HBQ7389324.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;gbkey=CDS;gene=lpxM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=L8R42_001213;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=HBQ7389324.1;transl_table=11 DAFVNP010000014.1 tpg gene 30097 31416 . - . ID=gene-L8R42_001214;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=L8R42_001214 DAFVNP010000014.1 Protein Homology CDS 30097 31416 . - 0 ID=cds-HBQ7389325.1;Parent=gene-L8R42_001214;Dbxref=NCBI_GP:HBQ7389325.1;Name=HBQ7389325.1;gbkey=CDS;gene=mepM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=L8R42_001214;product=murein DD-endopeptidase MepM;protein_id=HBQ7389325.1;transl_table=11 DAFVNP010000014.1 tpg gene 31432 32376 . - . ID=gene-L8R42_001215;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=L8R42_001215 DAFVNP010000014.1 Protein Homology CDS 31432 32376 . - 0 ID=cds-HBQ7389326.1;Parent=gene-L8R42_001215;Dbxref=NCBI_GP:HBQ7389326.1;Name=HBQ7389326.1;gbkey=CDS;gene=znuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=L8R42_001215;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=HBQ7389326.1;transl_table=11 DAFVNP010000014.1 tpg gene 32455 33210 . + . ID=gene-L8R42_001216;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=L8R42_001216 DAFVNP010000014.1 Protein Homology CDS 32455 33210 . + 0 ID=cds-HBQ7389327.1;Parent=gene-L8R42_001216;Dbxref=NCBI_GP:HBQ7389327.1;Name=HBQ7389327.1;gbkey=CDS;gene=znuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=L8R42_001216;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=HBQ7389327.1;transl_table=11 DAFVNP010000014.1 tpg gene 33207 33992 . + . ID=gene-L8R42_001217;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=L8R42_001217 DAFVNP010000014.1 Protein Homology CDS 33207 33992 . + 0 ID=cds-HBQ7389328.1;Parent=gene-L8R42_001217;Dbxref=NCBI_GP:HBQ7389328.1;Name=HBQ7389328.1;gbkey=CDS;gene=znuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=L8R42_001217;product=zinc ABC transporter permease subunit ZnuB;protein_id=HBQ7389328.1;transl_table=11 DAFVNP010000014.1 tpg gene 34071 35081 . - . ID=gene-L8R42_001218;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=L8R42_001218 DAFVNP010000014.1 Protein Homology CDS 34071 35081 . - 0 ID=cds-HBQ7389329.1;Parent=gene-L8R42_001218;Dbxref=NCBI_GP:HBQ7389329.1;Name=HBQ7389329.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=L8R42_001218;product=Holliday junction branch migration DNA helicase RuvB;protein_id=HBQ7389329.1;transl_table=11 DAFVNP010000014.1 tpg gene 35090 35701 . - . ID=gene-L8R42_001219;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=L8R42_001219 DAFVNP010000014.1 Protein Homology CDS 35090 35701 . - 0 ID=cds-HBQ7389330.1;Parent=gene-L8R42_001219;Dbxref=NCBI_GP:HBQ7389330.1;Name=HBQ7389330.1;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=L8R42_001219;product=Holliday junction branch migration protein RuvA;protein_id=HBQ7389330.1;transl_table=11 DAFVNP010000014.1 tpg gene 36061 36753 . - . ID=gene-L8R42_001220;Name=L8R42_001220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001220 DAFVNP010000014.1 Protein Homology CDS 36061 36753 . - 0 ID=cds-HBQ7389331.1;Parent=gene-L8R42_001220;Dbxref=NCBI_GP:HBQ7389331.1;Name=HBQ7389331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=L8R42_001220;product=hypothetical protein;protein_id=HBQ7389331.1;transl_table=11 DAFVNP010000014.1 tpg gene 36962 37561 . + . ID=gene-L8R42_001221;Name=L8R42_001221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001221 DAFVNP010000014.1 Protein Homology CDS 36962 37561 . + 0 ID=cds-HBQ7389332.1;Parent=gene-L8R42_001221;Dbxref=NCBI_GP:HBQ7389332.1;Name=HBQ7389332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=L8R42_001221;product=YebB family permuted papain-like enzyme;protein_id=HBQ7389332.1;transl_table=11 DAFVNP010000014.1 tpg gene 37563 38084 . - . ID=gene-L8R42_001222;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=L8R42_001222 DAFVNP010000014.1 Protein Homology CDS 37563 38084 . - 0 ID=cds-HBQ7389333.1;Parent=gene-L8R42_001222;Dbxref=NCBI_GP:HBQ7389333.1;Name=HBQ7389333.1;gbkey=CDS;gene=ruvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=L8R42_001222;product=crossover junction endodeoxyribonuclease RuvC;protein_id=HBQ7389333.1;transl_table=11 DAFVNP010000014.1 tpg gene 38121 38861 . - . ID=gene-L8R42_001223;Name=L8R42_001223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001223 DAFVNP010000014.1 Protein Homology CDS 38121 38861 . - 0 ID=cds-HBQ7389334.1;Parent=gene-L8R42_001223;Dbxref=NCBI_GP:HBQ7389334.1;Name=HBQ7389334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=L8R42_001223;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=HBQ7389334.1;transl_table=11 DAFVNP010000014.1 tpg gene 38891 39343 . - . ID=gene-L8R42_001224;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=L8R42_001224 DAFVNP010000014.1 Protein Homology CDS 38891 39343 . - 0 ID=cds-HBQ7389335.1;Parent=gene-L8R42_001224;Dbxref=NCBI_GP:HBQ7389335.1;Name=HBQ7389335.1;gbkey=CDS;gene=nudB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=L8R42_001224;product=dihydroneopterin triphosphate diphosphatase;protein_id=HBQ7389335.1;transl_table=11 DAFVNP010000014.1 tpg gene 39437 41209 . - . ID=gene-L8R42_001225;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=L8R42_001225 DAFVNP010000014.1 Protein Homology CDS 39437 41209 . - 0 ID=cds-HBQ7389336.1;Parent=gene-L8R42_001225;Dbxref=NCBI_GP:HBQ7389336.1;Name=HBQ7389336.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=L8R42_001225;product=aspartate--tRNA ligase;protein_id=HBQ7389336.1;transl_table=11 DAFVNP010000014.1 tpg gene 41534 42100 . + . ID=gene-L8R42_001226;Name=L8R42_001226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001226 DAFVNP010000014.1 Protein Homology CDS 41534 42100 . + 0 ID=cds-HBQ7389337.1;Parent=gene-L8R42_001226;Dbxref=NCBI_GP:HBQ7389337.1;Name=HBQ7389337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=L8R42_001226;product=hydrolase;protein_id=HBQ7389337.1;transl_table=11 DAFVNP010000014.1 tpg gene 42097 42915 . + . ID=gene-L8R42_001227;Name=L8R42_001227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001227 DAFVNP010000014.1 Protein Homology CDS 42097 42915 . + 0 ID=cds-HBQ7389338.1;Parent=gene-L8R42_001227;Dbxref=NCBI_GP:HBQ7389338.1;Name=HBQ7389338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=L8R42_001227;product=DUF72 domain-containing protein;protein_id=HBQ7389338.1;transl_table=11 DAFVNP010000014.1 tpg gene 42968 43363 . + . ID=gene-L8R42_001228;Name=L8R42_001228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001228 DAFVNP010000014.1 Protein Homology CDS 42968 43363 . + 0 ID=cds-HBQ7389339.1;Parent=gene-L8R42_001228;Dbxref=NCBI_GP:HBQ7389339.1;Name=HBQ7389339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=L8R42_001228;product=MAPEG family protein;protein_id=HBQ7389339.1;transl_table=11 DAFVNP010000014.1 tpg gene 43404 44147 . + . ID=gene-L8R42_001229;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=L8R42_001229 DAFVNP010000014.1 Protein Homology CDS 43404 44147 . + 0 ID=cds-HBQ7389340.1;Parent=gene-L8R42_001229;Dbxref=NCBI_GP:HBQ7389340.1;Name=HBQ7389340.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=L8R42_001229;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=HBQ7389340.1;transl_table=11 DAFVNP010000014.1 tpg gene 44144 45115 . + . ID=gene-L8R42_001230;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=L8R42_001230 DAFVNP010000014.1 Protein Homology CDS 44144 45115 . + 0 ID=cds-HBQ7389341.1;Parent=gene-L8R42_001230;Dbxref=NCBI_GP:HBQ7389341.1;Name=HBQ7389341.1;gbkey=CDS;gene=cmoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=L8R42_001230;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=HBQ7389341.1;transl_table=11 DAFVNP010000014.1 tpg gene 45351 46097 . - . ID=gene-L8R42_001231;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=L8R42_001231 DAFVNP010000014.1 Protein Homology CDS 45351 46097 . - 0 ID=cds-HBQ7389342.1;Parent=gene-L8R42_001231;Dbxref=NCBI_GP:HBQ7389342.1;Name=HBQ7389342.1;gbkey=CDS;gene=cutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=L8R42_001231;product=copper homeostasis protein CutC;protein_id=HBQ7389342.1;transl_table=11 DAFVNP010000014.1 tpg gene 46117 46686 . - . ID=gene-L8R42_001232;Name=L8R42_001232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001232 DAFVNP010000014.1 Protein Homology CDS 46117 46686 . - 0 ID=cds-HBQ7389343.1;Parent=gene-L8R42_001232;Dbxref=NCBI_GP:HBQ7389343.1;Name=HBQ7389343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=L8R42_001232;product=VOC family protein;protein_id=HBQ7389343.1;transl_table=11 DAFVNP010000014.1 tpg gene 46923 48656 . + . ID=gene-L8R42_001233;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=L8R42_001233 DAFVNP010000014.1 Protein Homology CDS 46923 48656 . + 0 ID=cds-HBQ7389344.1;Parent=gene-L8R42_001233;Dbxref=NCBI_GP:HBQ7389344.1;Name=HBQ7389344.1;gbkey=CDS;gene=argS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=L8R42_001233;product=arginine--tRNA ligase;protein_id=HBQ7389344.1;transl_table=11 DAFVNP010000014.1 tpg gene 48845 50716 . + . ID=gene-L8R42_001234;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=L8R42_001234 DAFVNP010000014.1 Protein Homology CDS 48845 50716 . + 0 ID=cds-HBQ7389345.1;Parent=gene-L8R42_001234;Dbxref=NCBI_GP:HBQ7389345.1;Name=HBQ7389345.1;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=L8R42_001234;product=penicillin-binding protein 2;protein_id=HBQ7389345.1;transl_table=11 DAFVNP010000014.1 tpg gene 50770 51909 . - . ID=gene-L8R42_001235;Name=L8R42_001235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001235 DAFVNP010000014.1 Protein Homology CDS 50770 51909 . - 0 ID=cds-HBQ7389346.1;Parent=gene-L8R42_001235;Dbxref=NCBI_GP:HBQ7389346.1;Name=HBQ7389346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=L8R42_001235;product=glycoside hydrolase family 105 protein;protein_id=HBQ7389346.1;transl_table=11 DAFVNP010000014.1 tpg gene 52146 52538 . - . ID=gene-L8R42_001236;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=protein_coding;locus_tag=L8R42_001236 DAFVNP010000014.1 Protein Homology CDS 52146 52538 . - 0 ID=cds-HBQ7389347.1;Parent=gene-L8R42_001236;Dbxref=NCBI_GP:HBQ7389347.1;Name=HBQ7389347.1;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=L8R42_001236;product=flagellar protein FlhE;protein_id=HBQ7389347.1;transl_table=11 DAFVNP010000014.1 tpg gene 52538 54616 . - . ID=gene-L8R42_001237;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=L8R42_001237 DAFVNP010000014.1 Protein Homology CDS 52538 54616 . - 0 ID=cds-HBQ7389348.1;Parent=gene-L8R42_001237;Dbxref=NCBI_GP:HBQ7389348.1;Name=HBQ7389348.1;gbkey=CDS;gene=flhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=L8R42_001237;product=flagellar biosynthesis protein FlhA;protein_id=HBQ7389348.1;transl_table=11 DAFVNP010000014.1 tpg gene 54609 55760 . - . ID=gene-L8R42_001238;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=L8R42_001238 DAFVNP010000014.1 Protein Homology CDS 54609 55760 . - 0 ID=cds-HBQ7389349.1;Parent=gene-L8R42_001238;Dbxref=NCBI_GP:HBQ7389349.1;Name=HBQ7389349.1;gbkey=CDS;gene=flhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=L8R42_001238;product=flagellar type III secretion system protein FlhB;protein_id=HBQ7389349.1;transl_table=11 DAFVNP010000014.1 tpg gene 55954 56598 . - . ID=gene-L8R42_001239;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=L8R42_001239 DAFVNP010000014.1 Protein Homology CDS 55954 56598 . - 0 ID=cds-HBQ7389350.1;Parent=gene-L8R42_001239;Dbxref=NCBI_GP:HBQ7389350.1;Name=HBQ7389350.1;gbkey=CDS;gene=cheZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=L8R42_001239;product=protein phosphatase CheZ;protein_id=HBQ7389350.1;transl_table=11 DAFVNP010000014.1 tpg gene 56609 56998 . - . ID=gene-L8R42_001240;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=L8R42_001240 DAFVNP010000014.1 Protein Homology CDS 56609 56998 . - 0 ID=cds-HBQ7389351.1;Parent=gene-L8R42_001240;Dbxref=NCBI_GP:HBQ7389351.1;Name=HBQ7389351.1;gbkey=CDS;gene=cheY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=L8R42_001240;product=chemotaxis response regulator CheY;protein_id=HBQ7389351.1;transl_table=11 DAFVNP010000014.1 tpg gene 57016 58065 . - . ID=gene-L8R42_001241;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=L8R42_001241 DAFVNP010000014.1 Protein Homology CDS 57016 58065 . - 0 ID=cds-HBQ7389352.1;Parent=gene-L8R42_001241;Dbxref=NCBI_GP:HBQ7389352.1;Name=HBQ7389352.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=L8R42_001241;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=HBQ7389352.1;transl_table=11 DAFVNP010000014.1 tpg gene 58062 58928 . - . ID=gene-L8R42_001242;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=L8R42_001242 DAFVNP010000014.1 Protein Homology CDS 58062 58928 . - 0 ID=cds-HBQ7389353.1;Parent=gene-L8R42_001242;Dbxref=NCBI_GP:HBQ7389353.1;Name=HBQ7389353.1;gbkey=CDS;gene=cheR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=L8R42_001242;product=protein-glutamate O-methyltransferase CheR;protein_id=HBQ7389353.1;transl_table=11 DAFVNP010000014.1 tpg gene 59089 60750 . - . ID=gene-L8R42_001243;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=L8R42_001243 DAFVNP010000014.1 Protein Homology CDS 59089 60750 . - 0 ID=cds-HBQ7389354.1;Parent=gene-L8R42_001243;Dbxref=NCBI_GP:HBQ7389354.1;Name=HBQ7389354.1;gbkey=CDS;gene=tar;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=L8R42_001243;product=methyl-accepting chemotaxis protein II;protein_id=HBQ7389354.1;transl_table=11 DAFVNP010000014.1 tpg gene 60987 61490 . - . ID=gene-L8R42_001244;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=L8R42_001244 DAFVNP010000014.1 Protein Homology CDS 60987 61490 . - 0 ID=cds-HBQ7389355.1;Parent=gene-L8R42_001244;Dbxref=NCBI_GP:HBQ7389355.1;Name=HBQ7389355.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=L8R42_001244;product=chemotaxis protein CheW;protein_id=HBQ7389355.1;transl_table=11 DAFVNP010000014.1 tpg gene 61511 63526 . - . ID=gene-L8R42_001245;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=L8R42_001245 DAFVNP010000014.1 Protein Homology CDS 61511 63526 . - 0 ID=cds-HBQ7389356.1;Parent=gene-L8R42_001245;Dbxref=NCBI_GP:HBQ7389356.1;Name=HBQ7389356.1;gbkey=CDS;gene=cheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=L8R42_001245;product=chemotaxis protein CheA;protein_id=HBQ7389356.1;transl_table=11 DAFVNP010000014.1 tpg gene 63531 64460 . - . ID=gene-L8R42_001246;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=L8R42_001246 DAFVNP010000014.1 Protein Homology CDS 63531 64460 . - 0 ID=cds-HBQ7389357.1;Parent=gene-L8R42_001246;Dbxref=NCBI_GP:HBQ7389357.1;Name=HBQ7389357.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=L8R42_001246;product=flagellar motor protein MotB;protein_id=HBQ7389357.1;transl_table=11 DAFVNP010000014.1 tpg gene 64457 65344 . - . ID=gene-L8R42_001247;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=L8R42_001247 DAFVNP010000014.1 Protein Homology CDS 64457 65344 . - 0 ID=cds-HBQ7389358.1;Parent=gene-L8R42_001247;Dbxref=NCBI_GP:HBQ7389358.1;Name=HBQ7389358.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=L8R42_001247;product=flagellar motor stator protein MotA;protein_id=HBQ7389358.1;transl_table=11 DAFVNP010000014.1 tpg gene 65469 66047 . - . ID=gene-L8R42_001248;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=L8R42_001248 DAFVNP010000014.1 Protein Homology CDS 65469 66047 . - 0 ID=cds-HBQ7389359.1;Parent=gene-L8R42_001248;Dbxref=NCBI_GP:HBQ7389359.1;Name=HBQ7389359.1;gbkey=CDS;gene=flhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127694.1;locus_tag=L8R42_001248;product=flagellar transcriptional regulator FlhC;protein_id=HBQ7389359.1;transl_table=11 DAFVNP010000014.1 tpg gene 66050 66391 . - . ID=gene-L8R42_001249;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=L8R42_001249 DAFVNP010000014.1 Protein Homology CDS 66050 66391 . - 0 ID=cds-HBQ7389360.1;Parent=gene-L8R42_001249;Dbxref=NCBI_GP:HBQ7389360.1;Name=HBQ7389360.1;gbkey=CDS;gene=flhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=L8R42_001249;product=flagellar transcriptional regulator FlhD;protein_id=HBQ7389360.1;transl_table=11 DAFVNP010000014.1 tpg gene 67074 67190 . + . ID=gene-L8R42_001250;Name=L8R42_001250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001250 DAFVNP010000014.1 Protein Homology CDS 67074 67190 . + 0 ID=cds-HBQ7389361.1;Parent=gene-L8R42_001250;Dbxref=NCBI_GP:HBQ7389361.1;Name=HBQ7389361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=L8R42_001250;product=hypothetical protein;protein_id=HBQ7389361.1;transl_table=11 DAFVNP010000014.1 tpg gene 67187 67615 . + . ID=gene-L8R42_001251;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=L8R42_001251 DAFVNP010000014.1 Protein Homology CDS 67187 67615 . + 0 ID=cds-HBQ7389362.1;Parent=gene-L8R42_001251;Dbxref=NCBI_GP:HBQ7389362.1;Name=HBQ7389362.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=L8R42_001251;product=universal stress protein UspC;protein_id=HBQ7389362.1;transl_table=11 DAFVNP010000014.1 tpg gene 67633 69054 . - . ID=gene-L8R42_001252;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=L8R42_001252 DAFVNP010000014.1 Protein Homology CDS 67633 69054 . - 0 ID=cds-HBQ7389363.1;Parent=gene-L8R42_001252;Dbxref=NCBI_GP:HBQ7389363.1;Name=HBQ7389363.1;gbkey=CDS;gene=otsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=L8R42_001252;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=HBQ7389363.1;transl_table=11 DAFVNP010000014.1 tpg gene 69029 69832 . - . ID=gene-L8R42_001253;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=L8R42_001253 DAFVNP010000014.1 Protein Homology CDS 69029 69832 . - 0 ID=cds-HBQ7389364.1;Parent=gene-L8R42_001253;Dbxref=NCBI_GP:HBQ7389364.1;Name=HBQ7389364.1;gbkey=CDS;gene=otsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=L8R42_001253;product=trehalose-phosphatase;protein_id=HBQ7389364.1;transl_table=11 DAFVNP010000014.1 tpg pseudogene 70055 70237 . - . ID=gene-L8R42_001254;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=L8R42_001254;pseudo=true DAFVNP010000014.1 Protein Homology CDS 70055 70237 . - 0 ID=cds-L8R42_001254;Parent=gene-L8R42_001254;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=L8R42_001254;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 DAFVNP010000014.1 tpg gene 70465 71022 . - . ID=gene-L8R42_001255;Name=L8R42_001255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001255 DAFVNP010000014.1 Protein Homology CDS 70465 71022 . - 0 ID=cds-HBQ7389365.1;Parent=gene-L8R42_001255;Dbxref=NCBI_GP:HBQ7389365.1;Name=HBQ7389365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=L8R42_001255;product=DJ-1/PfpI family protein;protein_id=HBQ7389365.1;transl_table=11 DAFVNP010000014.1 tpg gene 71580 72083 . + . ID=gene-L8R42_001256;Name=L8R42_001256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001256 DAFVNP010000014.1 Protein Homology CDS 71580 72083 . + 0 ID=cds-HBQ7389366.1;Parent=gene-L8R42_001256;Dbxref=NCBI_GP:HBQ7389366.1;Name=HBQ7389366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=L8R42_001256;product=non-heme ferritin-like protein;protein_id=HBQ7389366.1;transl_table=11 DAFVNP010000014.1 tpg gene 72262 72900 . - . ID=gene-L8R42_001257;Name=L8R42_001257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001257 DAFVNP010000014.1 Protein Homology CDS 72262 72900 . - 0 ID=cds-HBQ7389367.1;Parent=gene-L8R42_001257;Dbxref=NCBI_GP:HBQ7389367.1;Name=HBQ7389367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=L8R42_001257;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=HBQ7389367.1;transl_table=11 DAFVNP010000014.1 tpg gene 73156 73491 . + . ID=gene-L8R42_001258;Name=L8R42_001258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001258 DAFVNP010000014.1 Protein Homology CDS 73156 73491 . + 0 ID=cds-HBQ7389368.1;Parent=gene-L8R42_001258;Dbxref=NCBI_GP:HBQ7389368.1;Name=HBQ7389368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=L8R42_001258;product=YecR-like lipofamily protein;protein_id=HBQ7389368.1;transl_table=11 ##sequence-region DAFVNP010000015.1 1 70890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000015.1 tpg region 1 70890 . + . ID=DAFVNP010000015.1:1..70890;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000015.1 tpg gene 1 1165 . - . ID=gene-L8R42_001259;Name=L8R42_001259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001259;partial=true;start_range=.,1 DAFVNP010000015.1 Protein Homology CDS 1 1165 . - 0 ID=cds-HBQ7389369.1;Parent=gene-L8R42_001259;Dbxref=NCBI_GP:HBQ7389369.1;Name=HBQ7389369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=L8R42_001259;partial=true;product=MFS transporter;protein_id=HBQ7389369.1;start_range=.,1;transl_table=11 DAFVNP010000015.1 tpg gene 1231 2109 . - . ID=gene-L8R42_001260;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=L8R42_001260 DAFVNP010000015.1 Protein Homology CDS 1231 2109 . - 0 ID=cds-HBQ7389370.1;Parent=gene-L8R42_001260;Dbxref=NCBI_GP:HBQ7389370.1;Name=HBQ7389370.1;gbkey=CDS;gene=glxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=L8R42_001260;product=2-hydroxy-3-oxopropionate reductase;protein_id=HBQ7389370.1;transl_table=11 DAFVNP010000015.1 tpg gene 2210 2986 . - . ID=gene-L8R42_001261;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=L8R42_001261 DAFVNP010000015.1 Protein Homology CDS 2210 2986 . - 0 ID=cds-HBQ7389371.1;Parent=gene-L8R42_001261;Dbxref=NCBI_GP:HBQ7389371.1;Name=HBQ7389371.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=L8R42_001261;product=hydroxypyruvate isomerase;protein_id=HBQ7389371.1;transl_table=11 DAFVNP010000015.1 tpg gene 2999 4780 . - . ID=gene-L8R42_001262;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=L8R42_001262 DAFVNP010000015.1 Protein Homology CDS 2999 4780 . - 0 ID=cds-HBQ7389372.1;Parent=gene-L8R42_001262;Dbxref=NCBI_GP:HBQ7389372.1;Name=HBQ7389372.1;gbkey=CDS;gene=gcl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=L8R42_001262;product=glyoxylate carboligase;protein_id=HBQ7389372.1;transl_table=11 DAFVNP010000015.1 tpg gene 4865 5683 . - . ID=gene-L8R42_001263;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=L8R42_001263 DAFVNP010000015.1 Protein Homology CDS 4865 5683 . - 0 ID=cds-HBQ7389373.1;Parent=gene-L8R42_001263;Dbxref=NCBI_GP:HBQ7389373.1;Name=HBQ7389373.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=L8R42_001263;product=HTH-type transcriptional repressor AllR;protein_id=HBQ7389373.1;transl_table=11 DAFVNP010000015.1 tpg gene 5762 6244 . - . ID=gene-L8R42_001264;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=L8R42_001264 DAFVNP010000015.1 Protein Homology CDS 5762 6244 . - 0 ID=cds-HBQ7389374.1;Parent=gene-L8R42_001264;Dbxref=NCBI_GP:HBQ7389374.1;Name=HBQ7389374.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=L8R42_001264;product=ureidoglycolate lyase;protein_id=HBQ7389374.1;transl_table=11 DAFVNP010000015.1 tpg gene 6471 7397 . + . ID=gene-L8R42_001265;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=L8R42_001265 DAFVNP010000015.1 Protein Homology CDS 6471 7397 . + 0 ID=cds-HBQ7389375.1;Parent=gene-L8R42_001265;Dbxref=NCBI_GP:HBQ7389375.1;Name=HBQ7389375.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=L8R42_001265;product=HTH-type transcriptional activator AllS;protein_id=HBQ7389375.1;transl_table=11 DAFVNP010000015.1 tpg gene 7467 8561 . + . ID=gene-L8R42_001266;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=L8R42_001266 DAFVNP010000015.1 Protein Homology CDS 7467 8561 . + 0 ID=cds-HBQ7389376.1;Parent=gene-L8R42_001266;Dbxref=NCBI_GP:HBQ7389376.1;Name=HBQ7389376.1;gbkey=CDS;gene=mnmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=L8R42_001266;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=HBQ7389376.1;transl_table=11 DAFVNP010000015.1 tpg gene 8600 9259 . - . ID=gene-L8R42_001267;Name=L8R42_001267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001267 DAFVNP010000015.1 Protein Homology CDS 8600 9259 . - 0 ID=cds-HBQ7389377.1;Parent=gene-L8R42_001267;Dbxref=NCBI_GP:HBQ7389377.1;Name=HBQ7389377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=L8R42_001267;product=ABC transporter permease;protein_id=HBQ7389377.1;transl_table=11 DAFVNP010000015.1 tpg gene 9252 10268 . - . ID=gene-L8R42_001268;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=L8R42_001268 DAFVNP010000015.1 Protein Homology CDS 9252 10268 . - 0 ID=cds-HBQ7389378.1;Parent=gene-L8R42_001268;Dbxref=NCBI_GP:HBQ7389378.1;Name=HBQ7389378.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=L8R42_001268;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=HBQ7389378.1;transl_table=11 DAFVNP010000015.1 tpg gene 10305 11135 . - . ID=gene-L8R42_001269;Name=L8R42_001269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001269 DAFVNP010000015.1 Protein Homology CDS 10305 11135 . - 0 ID=cds-HBQ7389379.1;Parent=gene-L8R42_001269;Dbxref=NCBI_GP:HBQ7389379.1;Name=HBQ7389379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=L8R42_001269;product=metal ABC transporter substrate-binding protein;protein_id=HBQ7389379.1;transl_table=11 DAFVNP010000015.1 tpg gene 11392 12525 . - . ID=gene-L8R42_001270;Name=L8R42_001270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001270 DAFVNP010000015.1 Protein Homology CDS 11392 12525 . - 0 ID=cds-HBQ7389380.1;Parent=gene-L8R42_001270;Dbxref=NCBI_GP:HBQ7389380.1;Name=HBQ7389380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=L8R42_001270;product=porin;protein_id=HBQ7389380.1;transl_table=11 DAFVNP010000015.1 tpg gene 12711 15125 . - . ID=gene-L8R42_001271;Name=L8R42_001271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001271 DAFVNP010000015.1 Protein Homology CDS 12711 15125 . - 0 ID=cds-HBQ7389381.1;Parent=gene-L8R42_001271;Dbxref=NCBI_GP:HBQ7389381.1;Name=HBQ7389381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=L8R42_001271;product=ABC transporter permease;protein_id=HBQ7389381.1;transl_table=11 DAFVNP010000015.1 tpg gene 15122 15808 . - . ID=gene-L8R42_001272;Name=L8R42_001272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001272 DAFVNP010000015.1 Protein Homology CDS 15122 15808 . - 0 ID=cds-HBQ7389382.1;Parent=gene-L8R42_001272;Dbxref=NCBI_GP:HBQ7389382.1;Name=HBQ7389382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=L8R42_001272;product=ABC transporter ATP-binding protein;protein_id=HBQ7389382.1;transl_table=11 DAFVNP010000015.1 tpg gene 15779 16393 . + . ID=gene-L8R42_001273;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=L8R42_001273 DAFVNP010000015.1 Protein Homology CDS 15779 16393 . + 0 ID=cds-HBQ7389383.1;Parent=gene-L8R42_001273;Dbxref=NCBI_GP:HBQ7389383.1;Name=HBQ7389383.1;gbkey=CDS;gene=tesA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=L8R42_001273;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=HBQ7389383.1;transl_table=11 DAFVNP010000015.1 tpg gene 16548 17318 . + . ID=gene-L8R42_001274;Name=L8R42_001274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001274 DAFVNP010000015.1 Protein Homology CDS 16548 17318 . + 0 ID=cds-HBQ7389384.1;Parent=gene-L8R42_001274;Dbxref=NCBI_GP:HBQ7389384.1;Name=HBQ7389384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=L8R42_001274;product=SDR family oxidoreductase;protein_id=HBQ7389384.1;transl_table=11 DAFVNP010000015.1 tpg gene 17378 18232 . + . ID=gene-L8R42_001275;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=L8R42_001275 DAFVNP010000015.1 Protein Homology CDS 17378 18232 . + 0 ID=cds-HBQ7389385.1;Parent=gene-L8R42_001275;Dbxref=NCBI_GP:HBQ7389385.1;Name=HBQ7389385.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=L8R42_001275;product=chaperedoxin;protein_id=HBQ7389385.1;transl_table=11 DAFVNP010000015.1 tpg gene 18318 19097 . - . ID=gene-L8R42_001276;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=L8R42_001276 DAFVNP010000015.1 Protein Homology CDS 18318 19097 . - 0 ID=cds-HBQ7389386.1;Parent=gene-L8R42_001276;Dbxref=NCBI_GP:HBQ7389386.1;Name=HBQ7389386.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=L8R42_001276;product=iron export ABC transporter permease subunit FetB;protein_id=HBQ7389386.1;transl_table=11 DAFVNP010000015.1 tpg gene 19084 19761 . - . ID=gene-L8R42_001277;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=L8R42_001277 DAFVNP010000015.1 Protein Homology CDS 19084 19761 . - 0 ID=cds-HBQ7389387.1;Parent=gene-L8R42_001277;Dbxref=NCBI_GP:HBQ7389387.1;Name=HBQ7389387.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=L8R42_001277;product=iron ABC transporter ATP-binding protein FetA;protein_id=HBQ7389387.1;transl_table=11 DAFVNP010000015.1 tpg gene 19908 20825 . + . ID=gene-L8R42_001278;Name=L8R42_001278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001278 DAFVNP010000015.1 Protein Homology CDS 19908 20825 . + 0 ID=cds-HBQ7389388.1;Parent=gene-L8R42_001278;Dbxref=NCBI_GP:HBQ7389388.1;Name=HBQ7389388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=L8R42_001278;product=SPFH/Band 7/PHB domain protein;protein_id=HBQ7389388.1;transl_table=11 DAFVNP010000015.1 tpg gene 20822 21274 . + . ID=gene-L8R42_001279;Name=L8R42_001279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001279 DAFVNP010000015.1 Protein Homology CDS 20822 21274 . + 0 ID=cds-HBQ7389389.1;Parent=gene-L8R42_001279;Dbxref=NCBI_GP:HBQ7389389.1;Name=HBQ7389389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=L8R42_001279;product=NfeD family protein;protein_id=HBQ7389389.1;transl_table=11 DAFVNP010000015.1 tpg gene 21275 21691 . - . ID=gene-L8R42_001280;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=L8R42_001280 DAFVNP010000015.1 Protein Homology CDS 21275 21691 . - 0 ID=cds-HBQ7389390.1;Parent=gene-L8R42_001280;Dbxref=NCBI_GP:HBQ7389390.1;Name=HBQ7389390.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=L8R42_001280;product=Cu(I)-responsive transcriptional regulator;protein_id=HBQ7389390.1;transl_table=11 DAFVNP010000015.1 tpg gene 21801 24302 . + . ID=gene-L8R42_001281;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=L8R42_001281 DAFVNP010000015.1 Protein Homology CDS 21801 24302 . + 0 ID=cds-HBQ7389391.1;Parent=gene-L8R42_001281;Dbxref=NCBI_GP:HBQ7389391.1;Name=HBQ7389391.1;gbkey=CDS;gene=copA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=L8R42_001281;product=copper-exporting P-type ATPase CopA;protein_id=HBQ7389391.1;transl_table=11 DAFVNP010000015.1 tpg pseudogene 24455 25281 . + . ID=gene-L8R42_001282;Name=L8R42_001282;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001282;pseudo=true DAFVNP010000015.1 Protein Homology CDS 24455 25281 . + 0 ID=cds-L8R42_001282;Parent=gene-L8R42_001282;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=L8R42_001282;product=DUF1311 domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000015.1 tpg gene 25367 26161 . + . ID=gene-L8R42_001283;Name=L8R42_001283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001283 DAFVNP010000015.1 Protein Homology CDS 25367 26161 . + 0 ID=cds-HBQ7389392.1;Parent=gene-L8R42_001283;Dbxref=NCBI_GP:HBQ7389392.1;Name=HBQ7389392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=L8R42_001283;product=TraB/GumN family protein;protein_id=HBQ7389392.1;transl_table=11 DAFVNP010000015.1 tpg gene 26363 26842 . + . ID=gene-L8R42_001284;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=L8R42_001284 DAFVNP010000015.1 Protein Homology CDS 26363 26842 . + 0 ID=cds-HBQ7389393.1;Parent=gene-L8R42_001284;Dbxref=NCBI_GP:HBQ7389393.1;Name=HBQ7389393.1;gbkey=CDS;gene=ybaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=L8R42_001284;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=HBQ7389393.1;transl_table=11 DAFVNP010000015.1 tpg gene 26959 28611 . - . ID=gene-L8R42_001285;Name=L8R42_001285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001285 DAFVNP010000015.1 Protein Homology CDS 26959 28611 . - 0 ID=cds-HBQ7389394.1;Parent=gene-L8R42_001285;Dbxref=NCBI_GP:HBQ7389394.1;Name=HBQ7389394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=L8R42_001285;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=HBQ7389394.1;transl_table=11 DAFVNP010000015.1 tpg gene 28784 30004 . + . ID=gene-L8R42_001286;Name=L8R42_001286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001286 DAFVNP010000015.1 Protein Homology CDS 28784 30004 . + 0 ID=cds-HBQ7389395.1;Parent=gene-L8R42_001286;Dbxref=NCBI_GP:HBQ7389395.1;Name=HBQ7389395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=L8R42_001286;product=MFS transporter;protein_id=HBQ7389395.1;transl_table=11 DAFVNP010000015.1 tpg gene 30219 31895 . + . ID=gene-L8R42_001287;Name=L8R42_001287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001287 DAFVNP010000015.1 Protein Homology CDS 30219 31895 . + 0 ID=cds-HBQ7389396.1;Parent=gene-L8R42_001287;Dbxref=NCBI_GP:HBQ7389396.1;Name=HBQ7389396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=L8R42_001287;product=Kef family K(+) transporter;protein_id=HBQ7389396.1;transl_table=11 DAFVNP010000015.1 tpg gene 31944 33248 . - . ID=gene-L8R42_001288;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=L8R42_001288 DAFVNP010000015.1 Protein Homology CDS 31944 33248 . - 0 ID=cds-HBQ7389397.1;Parent=gene-L8R42_001288;Dbxref=NCBI_GP:HBQ7389397.1;Name=HBQ7389397.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=L8R42_001288;product=inosine/guanosine kinase;protein_id=HBQ7389397.1;transl_table=11 DAFVNP010000015.1 tpg gene 33401 34372 . + . ID=gene-L8R42_001289;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=L8R42_001289 DAFVNP010000015.1 Protein Homology CDS 33401 34372 . + 0 ID=cds-HBQ7389398.1;Parent=gene-L8R42_001289;Dbxref=NCBI_GP:HBQ7389398.1;Name=HBQ7389398.1;gbkey=CDS;gene=aes;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=L8R42_001289;product=acetyl esterase;protein_id=HBQ7389398.1;transl_table=11 DAFVNP010000015.1 tpg gene 34369 35331 . - . ID=gene-L8R42_001290;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=L8R42_001290 DAFVNP010000015.1 Protein Homology CDS 34369 35331 . - 0 ID=cds-HBQ7389399.1;Parent=gene-L8R42_001290;Dbxref=NCBI_GP:HBQ7389399.1;Name=HBQ7389399.1;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=L8R42_001290;product=ferrochelatase;protein_id=HBQ7389399.1;transl_table=11 DAFVNP010000015.1 tpg gene 35560 36204 . - . ID=gene-L8R42_001291;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=L8R42_001291 DAFVNP010000015.1 Protein Homology CDS 35560 36204 . - 0 ID=cds-HBQ7389400.1;Parent=gene-L8R42_001291;Dbxref=NCBI_GP:HBQ7389400.1;Name=HBQ7389400.1;gbkey=CDS;gene=adk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=L8R42_001291;product=adenylate kinase;protein_id=HBQ7389400.1;transl_table=11 DAFVNP010000015.1 tpg gene 36446 38320 . - . ID=gene-L8R42_001292;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=L8R42_001292 DAFVNP010000015.1 Protein Homology CDS 36446 38320 . - 0 ID=cds-HBQ7389401.1;Parent=gene-L8R42_001292;Dbxref=NCBI_GP:HBQ7389401.1;Name=HBQ7389401.1;gbkey=CDS;gene=htpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=L8R42_001292;product=molecular chaperone HtpG;protein_id=HBQ7389401.1;transl_table=11 DAFVNP010000015.1 tpg gene 38431 39036 . - . ID=gene-L8R42_001293;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=L8R42_001293 DAFVNP010000015.1 Protein Homology CDS 38431 39036 . - 0 ID=cds-HBQ7389402.1;Parent=gene-L8R42_001293;Dbxref=NCBI_GP:HBQ7389402.1;Name=HBQ7389402.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=L8R42_001293;product=recombination protein RecR;protein_id=HBQ7389402.1;transl_table=11 DAFVNP010000015.1 tpg gene 39036 39365 . - . ID=gene-L8R42_001294;Name=L8R42_001294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001294 DAFVNP010000015.1 Protein Homology CDS 39036 39365 . - 0 ID=cds-HBQ7389403.1;Parent=gene-L8R42_001294;Dbxref=NCBI_GP:HBQ7389403.1;Name=HBQ7389403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=L8R42_001294;product=YbaB/EbfC family nucleoid-associated protein;protein_id=HBQ7389403.1;transl_table=11 DAFVNP010000015.1 tpg gene 39411 41339 . - . ID=gene-L8R42_001295;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=L8R42_001295 DAFVNP010000015.1 Protein Homology CDS 39411 41339 . - 0 ID=cds-HBQ7389404.1;Parent=gene-L8R42_001295;Dbxref=NCBI_GP:HBQ7389404.1;Name=HBQ7389404.1;gbkey=CDS;gene=dnaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=L8R42_001295;product=DNA polymerase III subunit gamma/tau;protein_id=HBQ7389404.1;transl_table=11 DAFVNP010000015.1 cmsearch sequence_feature 40014 40078 . - . ID=id-L8R42_001295;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_001295 DAFVNP010000015.1 tpg gene 41453 42004 . - . ID=gene-L8R42_001296;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=L8R42_001296 DAFVNP010000015.1 Protein Homology CDS 41453 42004 . - 0 ID=cds-HBQ7389405.1;Parent=gene-L8R42_001296;Dbxref=NCBI_GP:HBQ7389405.1;Name=HBQ7389405.1;gbkey=CDS;gene=apt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=L8R42_001296;product=adenine phosphoribosyltransferase;protein_id=HBQ7389405.1;transl_table=11 DAFVNP010000015.1 tpg gene 42157 42534 . - . ID=gene-L8R42_001297;Name=L8R42_001297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001297 DAFVNP010000015.1 Protein Homology CDS 42157 42534 . - 0 ID=cds-HBQ7389406.1;Parent=gene-L8R42_001297;Dbxref=NCBI_GP:HBQ7389406.1;Name=HBQ7389406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=L8R42_001297;product=DUF454 family protein;protein_id=HBQ7389406.1;transl_table=11 DAFVNP010000015.1 tpg gene 42603 43130 . + . ID=gene-L8R42_001298;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=L8R42_001298 DAFVNP010000015.1 Protein Homology CDS 42603 43130 . + 0 ID=cds-HBQ7389407.1;Parent=gene-L8R42_001298;Dbxref=NCBI_GP:HBQ7389407.1;Name=HBQ7389407.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519637.1;locus_tag=L8R42_001298;product=primosomal replication protein N'';protein_id=HBQ7389407.1;transl_table=11 DAFVNP010000015.1 tpg gene 43144 43311 . + . ID=gene-L8R42_001299;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=L8R42_001299 DAFVNP010000015.1 Protein Homology CDS 43144 43311 . + 0 ID=cds-HBQ7389408.1;Parent=gene-L8R42_001299;Dbxref=NCBI_GP:HBQ7389408.1;Name=HBQ7389408.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=L8R42_001299;product=pleiotropic regulatory protein RsmS;protein_id=HBQ7389408.1;transl_table=11 DAFVNP010000015.1 tpg gene 43381 44304 . + . ID=gene-L8R42_001300;Name=L8R42_001300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001300 DAFVNP010000015.1 Protein Homology CDS 43381 44304 . + 0 ID=cds-HBQ7389409.1;Parent=gene-L8R42_001300;Dbxref=NCBI_GP:HBQ7389409.1;Name=HBQ7389409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=L8R42_001300;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HBQ7389409.1;transl_table=11 DAFVNP010000015.1 tpg gene 44346 47708 . - . ID=gene-L8R42_001301;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=L8R42_001301 DAFVNP010000015.1 Protein Homology CDS 44346 47708 . - 0 ID=cds-HBQ7389410.1;Parent=gene-L8R42_001301;Dbxref=NCBI_GP:HBQ7389410.1;Name=HBQ7389410.1;gbkey=CDS;gene=mscK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=L8R42_001301;product=mechanosensitive channel MscK;protein_id=HBQ7389410.1;transl_table=11 DAFVNP010000015.1 tpg gene 47827 48480 . - . ID=gene-L8R42_001302;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=L8R42_001302 DAFVNP010000015.1 Protein Homology CDS 47827 48480 . - 0 ID=cds-HBQ7389411.1;Parent=gene-L8R42_001302;Dbxref=NCBI_GP:HBQ7389411.1;Name=HBQ7389411.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=L8R42_001302;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=HBQ7389411.1;transl_table=11 DAFVNP010000015.1 tpg gene 48622 49815 . + . ID=gene-L8R42_001303;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=L8R42_001303 DAFVNP010000015.1 Protein Homology CDS 48622 49815 . + 0 ID=cds-HBQ7389412.1;Parent=gene-L8R42_001303;Dbxref=NCBI_GP:HBQ7389412.1;Name=HBQ7389412.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=L8R42_001303;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=HBQ7389412.1;transl_table=11 DAFVNP010000015.1 tpg gene 49838 52987 . + . ID=gene-L8R42_001304;Name=L8R42_001304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001304 DAFVNP010000015.1 Protein Homology CDS 49838 52987 . + 0 ID=cds-HBQ7389413.1;Parent=gene-L8R42_001304;Dbxref=NCBI_GP:HBQ7389413.1;Name=HBQ7389413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=L8R42_001304;product=multidrug efflux RND transporter permease subunit;protein_id=HBQ7389413.1;transl_table=11 DAFVNP010000015.1 tpg gene 53483 53857 . + . ID=gene-L8R42_001305;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=L8R42_001305 DAFVNP010000015.1 Protein Homology CDS 53483 53857 . + 0 ID=cds-HBQ7389414.1;Parent=gene-L8R42_001305;Dbxref=NCBI_GP:HBQ7389414.1;Name=HBQ7389414.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=L8R42_001305;product=Hha toxicity modulator TomB;protein_id=HBQ7389414.1;transl_table=11 DAFVNP010000015.1 tpg gene 53885 54103 . + . ID=gene-L8R42_001306;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=L8R42_001306 DAFVNP010000015.1 Protein Homology CDS 53885 54103 . + 0 ID=cds-HBQ7389415.1;Parent=gene-L8R42_001306;Dbxref=NCBI_GP:HBQ7389415.1;Name=HBQ7389415.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=L8R42_001306;product=hemolysin expression modulator Hha;protein_id=HBQ7389415.1;transl_table=11 DAFVNP010000015.1 tpg gene 54282 54833 . + . ID=gene-L8R42_001307;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=L8R42_001307 DAFVNP010000015.1 Protein Homology CDS 54282 54833 . + 0 ID=cds-HBQ7389416.1;Parent=gene-L8R42_001307;Dbxref=NCBI_GP:HBQ7389416.1;Name=HBQ7389416.1;gbkey=CDS;gene=maa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=L8R42_001307;product=maltose O-acetyltransferase;protein_id=HBQ7389416.1;transl_table=11 DAFVNP010000015.1 tpg gene 54951 55421 . + . ID=gene-L8R42_001308;Name=L8R42_001308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001308 DAFVNP010000015.1 Protein Homology CDS 54951 55421 . + 0 ID=cds-HBQ7389417.1;Parent=gene-L8R42_001308;Dbxref=NCBI_GP:HBQ7389417.1;Name=HBQ7389417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=L8R42_001308;product=hypothetical protein;protein_id=HBQ7389417.1;transl_table=11 DAFVNP010000015.1 tpg gene 55477 55617 . - . ID=gene-L8R42_001309;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=L8R42_001309 DAFVNP010000015.1 Protein Homology CDS 55477 55617 . - 0 ID=cds-HBQ7389418.1;Parent=gene-L8R42_001309;Dbxref=NCBI_GP:HBQ7389418.1;Name=HBQ7389418.1;gbkey=CDS;gene=ykgO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=L8R42_001309;product=type B 50S ribosomal protein L36;protein_id=HBQ7389418.1;transl_table=11 DAFVNP010000015.1 tpg gene 55623 55883 . - . ID=gene-L8R42_001310;Name=L8R42_001310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001310 DAFVNP010000015.1 Protein Homology CDS 55623 55883 . - 0 ID=cds-HBQ7389419.1;Parent=gene-L8R42_001310;Dbxref=NCBI_GP:HBQ7389419.1;Name=HBQ7389419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=L8R42_001310;product=type B 50S ribosomal protein L31;protein_id=HBQ7389419.1;transl_table=11 DAFVNP010000015.1 tpg gene 56108 57658 . + . ID=gene-L8R42_001311;Name=L8R42_001311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001311 DAFVNP010000015.1 Protein Homology CDS 56108 57658 . + 0 ID=cds-HBQ7389420.1;Parent=gene-L8R42_001311;Dbxref=NCBI_GP:HBQ7389420.1;Name=HBQ7389420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=L8R42_001311;product=EAL domain-containing protein;protein_id=HBQ7389420.1;transl_table=11 DAFVNP010000015.1 tpg gene 57708 57804 . - . ID=gene-L8R42_001312;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=L8R42_001312 DAFVNP010000015.1 cmsearch SRP_RNA 57708 57804 . - . ID=rna-L8R42_001312;Parent=gene-L8R42_001312;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_001312;product=signal recognition particle sRNA small type DAFVNP010000015.1 cmsearch exon 57708 57804 . - . ID=exon-L8R42_001312-1;Parent=rna-L8R42_001312;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_001312;product=signal recognition particle sRNA small type DAFVNP010000015.1 tpg gene 57889 58278 . + . ID=gene-L8R42_001313;Name=L8R42_001313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001313 DAFVNP010000015.1 Protein Homology CDS 57889 58278 . + 0 ID=cds-HBQ7389421.1;Parent=gene-L8R42_001313;Dbxref=NCBI_GP:HBQ7389421.1;Name=HBQ7389421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=L8R42_001313;product=MGMT family protein;protein_id=HBQ7389421.1;transl_table=11 DAFVNP010000015.1 tpg gene 58311 58880 . - . ID=gene-L8R42_001314;Name=L8R42_001314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001314 DAFVNP010000015.1 Protein Homology CDS 58311 58880 . - 0 ID=cds-HBQ7389422.1;Parent=gene-L8R42_001314;Dbxref=NCBI_GP:HBQ7389422.1;Name=HBQ7389422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=L8R42_001314;product=YbaY family lipoprotein;protein_id=HBQ7389422.1;transl_table=11 DAFVNP010000015.1 tpg gene 59095 59955 . + . ID=gene-L8R42_001315;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=L8R42_001315 DAFVNP010000015.1 Protein Homology CDS 59095 59955 . + 0 ID=cds-HBQ7389423.1;Parent=gene-L8R42_001315;Dbxref=NCBI_GP:HBQ7389423.1;Name=HBQ7389423.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=L8R42_001315;product=acyl-CoA thioesterase II;protein_id=HBQ7389423.1;transl_table=11 DAFVNP010000015.1 tpg gene 60055 61341 . - . ID=gene-L8R42_001316;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=L8R42_001316 DAFVNP010000015.1 Protein Homology CDS 60055 61341 . - 0 ID=cds-HBQ7389424.1;Parent=gene-L8R42_001316;Dbxref=NCBI_GP:HBQ7389424.1;Name=HBQ7389424.1;gbkey=CDS;gene=amtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=L8R42_001316;product=ammonium transporter AmtB;protein_id=HBQ7389424.1;transl_table=11 DAFVNP010000015.1 tpg gene 61373 61711 . - . ID=gene-L8R42_001317;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=L8R42_001317 DAFVNP010000015.1 Protein Homology CDS 61373 61711 . - 0 ID=cds-HBQ7389425.1;Parent=gene-L8R42_001317;Dbxref=NCBI_GP:HBQ7389425.1;Name=HBQ7389425.1;gbkey=CDS;gene=glnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=L8R42_001317;product=P-II family nitrogen regulator;protein_id=HBQ7389425.1;transl_table=11 DAFVNP010000015.1 tpg gene 61924 63705 . - . ID=gene-L8R42_001318;Name=L8R42_001318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001318 DAFVNP010000015.1 Protein Homology CDS 61924 63705 . - 0 ID=cds-HBQ7389426.1;Parent=gene-L8R42_001318;Dbxref=NCBI_GP:HBQ7389426.1;Name=HBQ7389426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=L8R42_001318;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=HBQ7389426.1;transl_table=11 DAFVNP010000015.1 tpg gene 63698 65470 . - . ID=gene-L8R42_001319;Name=L8R42_001319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001319 DAFVNP010000015.1 Protein Homology CDS 63698 65470 . - 0 ID=cds-HBQ7389427.1;Parent=gene-L8R42_001319;Dbxref=NCBI_GP:HBQ7389427.1;Name=HBQ7389427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=L8R42_001319;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=HBQ7389427.1;transl_table=11 DAFVNP010000015.1 tpg gene 65511 65969 . - . ID=gene-L8R42_001320;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=L8R42_001320 DAFVNP010000015.1 Protein Homology CDS 65511 65969 . - 0 ID=cds-HBQ7389428.1;Parent=gene-L8R42_001320;Dbxref=NCBI_GP:HBQ7389428.1;Name=HBQ7389428.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=L8R42_001320;product=DNA-binding transcriptional regulator DecR;protein_id=HBQ7389428.1;transl_table=11 DAFVNP010000015.1 tpg gene 66082 67137 . + . ID=gene-L8R42_001321;Name=L8R42_001321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001321 DAFVNP010000015.1 Protein Homology CDS 66082 67137 . + 0 ID=cds-HBQ7389429.1;Parent=gene-L8R42_001321;Dbxref=NCBI_GP:HBQ7389429.1;Name=HBQ7389429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=L8R42_001321;product=PLP-dependent cysteine synthase family protein;protein_id=HBQ7389429.1;transl_table=11 DAFVNP010000015.1 tpg gene 67187 68005 . - . ID=gene-L8R42_001322;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=L8R42_001322 DAFVNP010000015.1 Protein Homology CDS 67187 68005 . - 0 ID=cds-HBQ7389430.1;Parent=gene-L8R42_001322;Dbxref=NCBI_GP:HBQ7389430.1;Name=HBQ7389430.1;gbkey=CDS;gene=cof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=L8R42_001322;product=HMP-PP phosphatase;protein_id=HBQ7389430.1;transl_table=11 DAFVNP010000015.1 tpg gene 68106 69806 . + . ID=gene-L8R42_001323;Name=L8R42_001323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001323 DAFVNP010000015.1 Protein Homology CDS 68106 69806 . + 0 ID=cds-HBQ7389431.1;Parent=gene-L8R42_001323;Dbxref=NCBI_GP:HBQ7389431.1;Name=HBQ7389431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=L8R42_001323;product=SgrR family transcriptional regulator;protein_id=HBQ7389431.1;transl_table=11 DAFVNP010000015.1 tpg gene 69871 70566 . + . ID=gene-L8R42_001324;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=L8R42_001324 DAFVNP010000015.1 Protein Homology CDS 69871 70566 . + 0 ID=cds-HBQ7389432.1;Parent=gene-L8R42_001324;Dbxref=NCBI_GP:HBQ7389432.1;Name=HBQ7389432.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=L8R42_001324;product=7-cyano-7-deazaguanine synthase QueC;protein_id=HBQ7389432.1;transl_table=11 DAFVNP010000015.1 tpg gene 70672 70890 . - . ID=gene-L8R42_001325;Name=L8R42_001325;end_range=70890,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001325;partial=true DAFVNP010000015.1 Protein Homology CDS 70672 70890 . - 0 ID=cds-HBQ7389433.1;Parent=gene-L8R42_001325;Dbxref=NCBI_GP:HBQ7389433.1;Name=HBQ7389433.1;end_range=70890,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=L8R42_001325;partial=true;product=thioesterase;protein_id=HBQ7389433.1;transl_table=11 ##sequence-region DAFVNP010000016.1 1 68806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000016.1 tpg region 1 68806 . + . ID=DAFVNP010000016.1:1..68806;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000016.1 tpg gene 109 1362 . - . ID=gene-L8R42_001326;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=L8R42_001326 DAFVNP010000016.1 Protein Homology CDS 109 1362 . - 0 ID=cds-HBQ7389434.1;Parent=gene-L8R42_001326;Dbxref=NCBI_GP:HBQ7389434.1;Name=HBQ7389434.1;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=L8R42_001326;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=HBQ7389434.1;transl_table=11 DAFVNP010000016.1 tpg gene 1595 2926 . + . ID=gene-L8R42_001327;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=L8R42_001327 DAFVNP010000016.1 Protein Homology CDS 1595 2926 . + 0 ID=cds-HBQ7389435.1;Parent=gene-L8R42_001327;Dbxref=NCBI_GP:HBQ7389435.1;Name=HBQ7389435.1;gbkey=CDS;gene=argA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=L8R42_001327;product=amino-acid N-acetyltransferase;protein_id=HBQ7389435.1;transl_table=11 DAFVNP010000016.1 tpg gene 3029 4864 . - . ID=gene-L8R42_001328;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=L8R42_001328 DAFVNP010000016.1 Protein Homology CDS 3029 4864 . - 0 ID=cds-HBQ7389436.1;Parent=gene-L8R42_001328;Dbxref=NCBI_GP:HBQ7389436.1;Name=HBQ7389436.1;gbkey=CDS;gene=recD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=L8R42_001328;product=exodeoxyribonuclease V subunit alpha;protein_id=HBQ7389436.1;transl_table=11 DAFVNP010000016.1 tpg gene 4861 8406 . - . ID=gene-L8R42_001329;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=L8R42_001329 DAFVNP010000016.1 Protein Homology CDS 4861 8406 . - 0 ID=cds-HBQ7389437.1;Parent=gene-L8R42_001329;Dbxref=NCBI_GP:HBQ7389437.1;Name=HBQ7389437.1;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=L8R42_001329;product=exodeoxyribonuclease V subunit beta;protein_id=HBQ7389437.1;transl_table=11 DAFVNP010000016.1 tpg gene 8399 11287 . - . ID=gene-L8R42_001330;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=L8R42_001330 DAFVNP010000016.1 Protein Homology CDS 8399 11287 . - 0 ID=cds-HBQ7389438.1;Parent=gene-L8R42_001330;Dbxref=NCBI_GP:HBQ7389438.1;Name=HBQ7389438.1;gbkey=CDS;gene=ptrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=L8R42_001330;product=pitrilysin;protein_id=HBQ7389438.1;transl_table=11 DAFVNP010000016.1 tpg gene 11465 14836 . - . ID=gene-L8R42_001331;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=L8R42_001331 DAFVNP010000016.1 Protein Homology CDS 11465 14836 . - 0 ID=cds-HBQ7389439.1;Parent=gene-L8R42_001331;Dbxref=NCBI_GP:HBQ7389439.1;Name=HBQ7389439.1;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=L8R42_001331;product=exodeoxyribonuclease V subunit gamma;protein_id=HBQ7389439.1;transl_table=11 DAFVNP010000016.1 tpg gene 14852 15172 . - . ID=gene-L8R42_001332;Name=L8R42_001332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001332 DAFVNP010000016.1 Protein Homology CDS 14852 15172 . - 0 ID=cds-HBQ7389440.1;Parent=gene-L8R42_001332;Dbxref=NCBI_GP:HBQ7389440.1;Name=HBQ7389440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=L8R42_001332;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=HBQ7389440.1;transl_table=11 DAFVNP010000016.1 tpg gene 15157 15564 . - . ID=gene-L8R42_001333;Name=L8R42_001333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001333 DAFVNP010000016.1 Protein Homology CDS 15157 15564 . - 0 ID=cds-HBQ7389441.1;Parent=gene-L8R42_001333;Dbxref=NCBI_GP:HBQ7389441.1;Name=HBQ7389441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=L8R42_001333;product=DUF2509 family protein;protein_id=HBQ7389441.1;transl_table=11 DAFVNP010000016.1 tpg gene 15561 16124 . - . ID=gene-L8R42_001334;Name=L8R42_001334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001334 DAFVNP010000016.1 Protein Homology CDS 15561 16124 . - 0 ID=cds-HBQ7389442.1;Parent=gene-L8R42_001334;Dbxref=NCBI_GP:HBQ7389442.1;Name=HBQ7389442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=L8R42_001334;product=prepilin peptidase-dependent protein;protein_id=HBQ7389442.1;transl_table=11 DAFVNP010000016.1 tpg gene 16115 16585 . - . ID=gene-L8R42_001335;Name=L8R42_001335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001335 DAFVNP010000016.1 Protein Homology CDS 16115 16585 . - 0 ID=cds-HBQ7389443.1;Parent=gene-L8R42_001335;Dbxref=NCBI_GP:HBQ7389443.1;Name=HBQ7389443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=L8R42_001335;product=prepilin peptidase-dependent protein;protein_id=HBQ7389443.1;transl_table=11 DAFVNP010000016.1 tpg gene 16770 17564 . - . ID=gene-L8R42_001336;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=L8R42_001336 DAFVNP010000016.1 Protein Homology CDS 16770 17564 . - 0 ID=cds-HBQ7389444.1;Parent=gene-L8R42_001336;Dbxref=NCBI_GP:HBQ7389444.1;Name=HBQ7389444.1;gbkey=CDS;gene=thyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=L8R42_001336;product=thymidylate synthase;protein_id=HBQ7389444.1;transl_table=11 DAFVNP010000016.1 tpg gene 17571 18446 . - . ID=gene-L8R42_001337;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=L8R42_001337 DAFVNP010000016.1 Protein Homology CDS 17571 18446 . - 0 ID=cds-HBQ7389445.1;Parent=gene-L8R42_001337;Dbxref=NCBI_GP:HBQ7389445.1;Name=HBQ7389445.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=L8R42_001337;product=prolipoprotein diacylglyceryl transferase;protein_id=HBQ7389445.1;transl_table=11 DAFVNP010000016.1 tpg gene 18662 20908 . - . ID=gene-L8R42_001338;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=L8R42_001338 DAFVNP010000016.1 Protein Homology CDS 18662 20908 . - 0 ID=cds-HBQ7389446.1;Parent=gene-L8R42_001338;Dbxref=NCBI_GP:HBQ7389446.1;Name=HBQ7389446.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=L8R42_001338;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=HBQ7389446.1;transl_table=11 DAFVNP010000016.1 tpg gene 20921 21451 . - . ID=gene-L8R42_001339;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=L8R42_001339 DAFVNP010000016.1 Protein Homology CDS 20921 21451 . - 0 ID=cds-HBQ7389447.1;Parent=gene-L8R42_001339;Dbxref=NCBI_GP:HBQ7389447.1;Name=HBQ7389447.1;gbkey=CDS;gene=rppH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=L8R42_001339;product=RNA pyrophosphohydrolase;protein_id=HBQ7389447.1;transl_table=11 DAFVNP010000016.1 tpg gene 22134 22829 . + . ID=gene-L8R42_001340;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=L8R42_001340 DAFVNP010000016.1 Protein Homology CDS 22134 22829 . + 0 ID=cds-HBQ7389448.1;Parent=gene-L8R42_001340;Dbxref=NCBI_GP:HBQ7389448.1;Name=HBQ7389448.1;gbkey=CDS;gene=mutH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=L8R42_001340;product=DNA mismatch repair endonuclease MutH;protein_id=HBQ7389448.1;transl_table=11 DAFVNP010000016.1 tpg gene 23011 23724 . + . ID=gene-L8R42_001341;Name=L8R42_001341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001341 DAFVNP010000016.1 Protein Homology CDS 23011 23724 . + 0 ID=cds-HBQ7389449.1;Parent=gene-L8R42_001341;Dbxref=NCBI_GP:HBQ7389449.1;Name=HBQ7389449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=L8R42_001341;product=TerC family protein;protein_id=HBQ7389449.1;transl_table=11 DAFVNP010000016.1 tpg gene 23894 24112 . + . ID=gene-L8R42_001342;Name=L8R42_001342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001342 DAFVNP010000016.1 Protein Homology CDS 23894 24112 . + 0 ID=cds-HBQ7389450.1;Parent=gene-L8R42_001342;Dbxref=NCBI_GP:HBQ7389450.1;Name=HBQ7389450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=L8R42_001342;product=YgdI/YgdR family lipoprotein;protein_id=HBQ7389450.1;transl_table=11 DAFVNP010000016.1 tpg gene 24303 25343 . + . ID=gene-L8R42_001343;Name=L8R42_001343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001343 DAFVNP010000016.1 Protein Homology CDS 24303 25343 . + 0 ID=cds-HBQ7389451.1;Parent=gene-L8R42_001343;Dbxref=NCBI_GP:HBQ7389451.1;Name=HBQ7389451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=L8R42_001343;product=NADP(H)-dependent aldo-keto reductase;protein_id=HBQ7389451.1;transl_table=11 DAFVNP010000016.1 tpg gene 25430 26632 . - . ID=gene-L8R42_001344;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=L8R42_001344 DAFVNP010000016.1 Protein Homology CDS 25430 26632 . - 0 ID=cds-HBQ7389452.1;Parent=gene-L8R42_001344;Dbxref=NCBI_GP:HBQ7389452.1;Name=HBQ7389452.1;gbkey=CDS;gene=lplT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=L8R42_001344;product=lysophospholipid transporter LplT;protein_id=HBQ7389452.1;transl_table=11 DAFVNP010000016.1 tpg gene 26625 28784 . - . ID=gene-L8R42_001345;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=L8R42_001345 DAFVNP010000016.1 Protein Homology CDS 26625 28784 . - 0 ID=cds-HBQ7389453.1;Parent=gene-L8R42_001345;Dbxref=NCBI_GP:HBQ7389453.1;Name=HBQ7389453.1;gbkey=CDS;gene=aas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=L8R42_001345;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=HBQ7389453.1;transl_table=11 DAFVNP010000016.1 tpg gene 28941 29168 . - . ID=gene-L8R42_001346;Name=L8R42_001346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001346 DAFVNP010000016.1 GeneMarkS-2+ CDS 28941 29168 . - 0 ID=cds-HBQ7389454.1;Parent=gene-L8R42_001346;Dbxref=NCBI_GP:HBQ7389454.1;Name=HBQ7389454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_001346;product=hypothetical protein;protein_id=HBQ7389454.1;transl_table=11 DAFVNP010000016.1 tpg gene 29376 30404 . + . ID=gene-L8R42_001347;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=L8R42_001347 DAFVNP010000016.1 Protein Homology CDS 29376 30404 . + 0 ID=cds-HBQ7389455.1;Parent=gene-L8R42_001347;Dbxref=NCBI_GP:HBQ7389455.1;Name=HBQ7389455.1;gbkey=CDS;gene=galR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=L8R42_001347;product=HTH-type transcriptional regulator GalR;protein_id=HBQ7389455.1;transl_table=11 DAFVNP010000016.1 tpg gene 30415 31437 . + . ID=gene-L8R42_001348;Name=L8R42_001348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001348 DAFVNP010000016.1 Protein Homology CDS 30415 31437 . + 0 ID=cds-HBQ7389456.1;Parent=gene-L8R42_001348;Dbxref=NCBI_GP:HBQ7389456.1;Name=HBQ7389456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=L8R42_001348;product=LacI family DNA-binding transcriptional regulator;protein_id=HBQ7389456.1;transl_table=11 DAFVNP010000016.1 tpg gene 31447 32709 . - . ID=gene-L8R42_001349;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=L8R42_001349 DAFVNP010000016.1 Protein Homology CDS 31447 32709 . - 0 ID=cds-HBQ7389457.1;Parent=gene-L8R42_001349;Dbxref=NCBI_GP:HBQ7389457.1;Name=HBQ7389457.1;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406298.1;locus_tag=L8R42_001349;product=diaminopimelate decarboxylase;protein_id=HBQ7389457.1;transl_table=11 DAFVNP010000016.1 tpg gene 32827 33762 . + . ID=gene-L8R42_001350;Name=L8R42_001350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001350 DAFVNP010000016.1 Protein Homology CDS 32827 33762 . + 0 ID=cds-HBQ7389458.1;Parent=gene-L8R42_001350;Dbxref=NCBI_GP:HBQ7389458.1;Name=HBQ7389458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=L8R42_001350;product=LysR family transcriptional regulator;protein_id=HBQ7389458.1;transl_table=11 DAFVNP010000016.1 tpg gene 33734 34441 . - . ID=gene-L8R42_001351;Name=L8R42_001351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001351 DAFVNP010000016.1 Protein Homology CDS 33734 34441 . - 0 ID=cds-HBQ7389459.1;Parent=gene-L8R42_001351;Dbxref=NCBI_GP:HBQ7389459.1;Name=HBQ7389459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=L8R42_001351;product=aspartate/glutamate racemase;protein_id=HBQ7389459.1;transl_table=11 DAFVNP010000016.1 tpg gene 34554 35972 . - . ID=gene-L8R42_001352;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=L8R42_001352 DAFVNP010000016.1 Protein Homology CDS 34554 35972 . - 0 ID=cds-HBQ7389460.1;Parent=gene-L8R42_001352;Dbxref=NCBI_GP:HBQ7389460.1;Name=HBQ7389460.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=L8R42_001352;product=arabinose-proton symporter AraE;protein_id=HBQ7389460.1;transl_table=11 DAFVNP010000016.1 tpg gene 36326 37087 . - . ID=gene-L8R42_001353;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=L8R42_001353 DAFVNP010000016.1 Protein Homology CDS 36326 37087 . - 0 ID=cds-HBQ7389461.1;Parent=gene-L8R42_001353;Dbxref=NCBI_GP:HBQ7389461.1;Name=HBQ7389461.1;gbkey=CDS;gene=kduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=L8R42_001353;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=HBQ7389461.1;transl_table=11 DAFVNP010000016.1 tpg gene 37144 37980 . - . ID=gene-L8R42_001354;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=L8R42_001354 DAFVNP010000016.1 Protein Homology CDS 37144 37980 . - 0 ID=cds-HBQ7389462.1;Parent=gene-L8R42_001354;Dbxref=NCBI_GP:HBQ7389462.1;Name=HBQ7389462.1;gbkey=CDS;gene=kduI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=L8R42_001354;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=HBQ7389462.1;transl_table=11 DAFVNP010000016.1 tpg gene 38409 39587 . - . ID=gene-L8R42_001355;Name=L8R42_001355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001355 DAFVNP010000016.1 Protein Homology CDS 38409 39587 . - 0 ID=cds-HBQ7389463.1;Parent=gene-L8R42_001355;Dbxref=NCBI_GP:HBQ7389463.1;Name=HBQ7389463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=L8R42_001355;product=acetyl-CoA C-acetyltransferase;protein_id=HBQ7389463.1;transl_table=11 DAFVNP010000016.1 tpg gene 39710 40573 . - . ID=gene-L8R42_001356;Name=L8R42_001356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001356 DAFVNP010000016.1 Protein Homology CDS 39710 40573 . - 0 ID=cds-HBQ7389464.1;Parent=gene-L8R42_001356;Dbxref=NCBI_GP:HBQ7389464.1;Name=HBQ7389464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=L8R42_001356;product=LysR family transcriptional regulator;protein_id=HBQ7389464.1;transl_table=11 DAFVNP010000016.1 tpg gene 40677 41132 . + . ID=gene-L8R42_001357;Name=L8R42_001357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001357 DAFVNP010000016.1 Protein Homology CDS 40677 41132 . + 0 ID=cds-HBQ7389465.1;Parent=gene-L8R42_001357;Dbxref=NCBI_GP:HBQ7389465.1;Name=HBQ7389465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=L8R42_001357;product=multidrug/biocide efflux PACE transporter;protein_id=HBQ7389465.1;transl_table=11 DAFVNP010000016.1 tpg gene 41274 42503 . + . ID=gene-L8R42_001358;Name=L8R42_001358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001358 DAFVNP010000016.1 Protein Homology CDS 41274 42503 . + 0 ID=cds-HBQ7389466.1;Parent=gene-L8R42_001358;Dbxref=NCBI_GP:HBQ7389466.1;Name=HBQ7389466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=L8R42_001358;product=transporter;protein_id=HBQ7389466.1;transl_table=11 DAFVNP010000016.1 tpg gene 42534 42806 . - . ID=gene-L8R42_001359;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=L8R42_001359 DAFVNP010000016.1 Protein Homology CDS 42534 42806 . - 0 ID=cds-HBQ7389467.1;Parent=gene-L8R42_001359;Dbxref=NCBI_GP:HBQ7389467.1;Name=HBQ7389467.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=L8R42_001359;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=HBQ7389467.1;transl_table=11 DAFVNP010000016.1 tpg gene 42928 43794 . + . ID=gene-L8R42_001360;Name=L8R42_001360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001360 DAFVNP010000016.1 Protein Homology CDS 42928 43794 . + 0 ID=cds-HBQ7389468.1;Parent=gene-L8R42_001360;Dbxref=NCBI_GP:HBQ7389468.1;Name=HBQ7389468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=L8R42_001360;product=nickel/cobalt efflux protein RcnA;protein_id=HBQ7389468.1;transl_table=11 DAFVNP010000016.1 tpg gene 44007 44762 . - . ID=gene-L8R42_001361;Name=L8R42_001361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001361 DAFVNP010000016.1 Protein Homology CDS 44007 44762 . - 0 ID=cds-HBQ7389469.1;Parent=gene-L8R42_001361;Dbxref=NCBI_GP:HBQ7389469.1;Name=HBQ7389469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=L8R42_001361;product=transcriptional regulator;protein_id=HBQ7389469.1;transl_table=11 DAFVNP010000016.1 tpg gene 44749 45255 . - . ID=gene-L8R42_001362;Name=L8R42_001362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001362 DAFVNP010000016.1 Protein Homology CDS 44749 45255 . - 0 ID=cds-HBQ7389470.1;Parent=gene-L8R42_001362;Dbxref=NCBI_GP:HBQ7389470.1;Name=HBQ7389470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=L8R42_001362;product=CaiF/GrlA family transcriptional regulator;protein_id=HBQ7389470.1;transl_table=11 DAFVNP010000016.1 tpg gene 45364 46431 . - . ID=gene-L8R42_001363;Name=L8R42_001363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001363 DAFVNP010000016.1 Protein Homology CDS 45364 46431 . - 0 ID=cds-HBQ7389471.1;Parent=gene-L8R42_001363;Dbxref=NCBI_GP:HBQ7389471.1;Name=HBQ7389471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=L8R42_001363;product=fimbrial protein;protein_id=HBQ7389471.1;transl_table=11 DAFVNP010000016.1 tpg gene 46428 47171 . - . ID=gene-L8R42_001364;Name=L8R42_001364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001364 DAFVNP010000016.1 Protein Homology CDS 46428 47171 . - 0 ID=cds-HBQ7389472.1;Parent=gene-L8R42_001364;Dbxref=NCBI_GP:HBQ7389472.1;Name=HBQ7389472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=L8R42_001364;product=fimbria/pilus periplasmic chaperone;protein_id=HBQ7389472.1;transl_table=11 DAFVNP010000016.1 tpg gene 47212 49701 . - . ID=gene-L8R42_001365;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=L8R42_001365 DAFVNP010000016.1 Protein Homology CDS 47212 49701 . - 0 ID=cds-HBQ7389473.1;Parent=gene-L8R42_001365;Dbxref=NCBI_GP:HBQ7389473.1;Name=HBQ7389473.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=L8R42_001365;product=fimbrial outer membrane usher protein StdB;protein_id=HBQ7389473.1;transl_table=11 DAFVNP010000016.1 tpg gene 49821 50408 . - . ID=gene-L8R42_001366;Name=L8R42_001366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001366 DAFVNP010000016.1 Protein Homology CDS 49821 50408 . - 0 ID=cds-HBQ7389474.1;Parent=gene-L8R42_001366;Dbxref=NCBI_GP:HBQ7389474.1;Name=HBQ7389474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=L8R42_001366;product=fimbrial protein;protein_id=HBQ7389474.1;transl_table=11 DAFVNP010000016.1 tpg gene 51127 51759 . - . ID=gene-L8R42_001367;Name=L8R42_001367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001367 DAFVNP010000016.1 Protein Homology CDS 51127 51759 . - 0 ID=cds-HBQ7389475.1;Parent=gene-L8R42_001367;Dbxref=NCBI_GP:HBQ7389475.1;Name=HBQ7389475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=L8R42_001367;product=YfdX family protein;protein_id=HBQ7389475.1;transl_table=11 DAFVNP010000016.1 tpg gene 51806 52342 . - . ID=gene-L8R42_001368;Name=L8R42_001368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001368 DAFVNP010000016.1 Protein Homology CDS 51806 52342 . - 0 ID=cds-HBQ7389476.1;Parent=gene-L8R42_001368;Dbxref=NCBI_GP:HBQ7389476.1;Name=HBQ7389476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=L8R42_001368;product=porin family protein;protein_id=HBQ7389476.1;transl_table=11 DAFVNP010000016.1 tpg pseudogene 53147 53317 . - . ID=gene-L8R42_001369;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=pseudogene;locus_tag=L8R42_001369;pseudo=true DAFVNP010000016.1 Protein Homology CDS 53147 53317 . - 0 ID=cds-L8R42_001369;Parent=gene-L8R42_001369;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=L8R42_001369;product=tRNA(fMet)-specific endonuclease VapC;pseudo=true;transl_table=11 DAFVNP010000016.1 tpg gene 53508 54314 . + . ID=gene-L8R42_001370;Name=L8R42_001370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001370 DAFVNP010000016.1 Protein Homology CDS 53508 54314 . + 0 ID=cds-HBQ7389477.1;Parent=gene-L8R42_001370;Dbxref=NCBI_GP:HBQ7389477.1;Name=HBQ7389477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=L8R42_001370;product=DUF1460 domain-containing protein;protein_id=HBQ7389477.1;transl_table=11 DAFVNP010000016.1 tpg gene 54446 54519 . - . ID=gene-L8R42_001371;Name=L8R42_001371;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001371 DAFVNP010000016.1 tRNAscan-SE tRNA 54446 54519 . - . ID=rna-L8R42_001371;Parent=gene-L8R42_001371;anticodon=(pos:complement(54485..54487));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001371;product=tRNA-Gly DAFVNP010000016.1 tRNAscan-SE exon 54446 54519 . - . ID=exon-L8R42_001371-1;Parent=rna-L8R42_001371;anticodon=(pos:complement(54485..54487));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001371;product=tRNA-Gly DAFVNP010000016.1 tpg gene 54599 55357 . - . ID=gene-L8R42_001372;Name=L8R42_001372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001372 DAFVNP010000016.1 Protein Homology CDS 54599 55357 . - 0 ID=cds-HBQ7389478.1;Parent=gene-L8R42_001372;Dbxref=NCBI_GP:HBQ7389478.1;Name=HBQ7389478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=L8R42_001372;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=HBQ7389478.1;transl_table=11 DAFVNP010000016.1 tpg gene 55622 56167 . + . ID=gene-L8R42_001373;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=L8R42_001373 DAFVNP010000016.1 Protein Homology CDS 55622 56167 . + 0 ID=cds-HBQ7389479.1;Parent=gene-L8R42_001373;Dbxref=NCBI_GP:HBQ7389479.1;Name=HBQ7389479.1;gbkey=CDS;gene=idi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=L8R42_001373;product=isopentenyl-diphosphate Delta-isomerase;protein_id=HBQ7389479.1;transl_table=11 DAFVNP010000016.1 tpg gene 56243 57760 . - . ID=gene-L8R42_001374;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=L8R42_001374 DAFVNP010000016.1 Protein Homology CDS 56243 57760 . - 0 ID=cds-HBQ7389480.1;Parent=gene-L8R42_001374;Dbxref=NCBI_GP:HBQ7389480.1;Name=HBQ7389480.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=L8R42_001374;product=lysine--tRNA ligase;protein_id=HBQ7389480.1;transl_table=11 DAFVNP010000016.1 tpg gene 57770 58868 . - . ID=gene-L8R42_001375;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=L8R42_001375 DAFVNP010000016.1 Protein Homology CDS 58794 58868 . - 0 ID=cds-HBQ7389481.1;Parent=gene-L8R42_001375;Dbxref=NCBI_GP:HBQ7389481.1;Name=HBQ7389481.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=L8R42_001375;product=peptide chain release factor 2;protein_id=HBQ7389481.1;transl_table=11 DAFVNP010000016.1 Protein Homology CDS 57770 58792 . - 0 ID=cds-HBQ7389481.1;Parent=gene-L8R42_001375;Dbxref=NCBI_GP:HBQ7389481.1;Name=HBQ7389481.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=L8R42_001375;product=peptide chain release factor 2;protein_id=HBQ7389481.1;transl_table=11 DAFVNP010000016.1 tpg gene 58973 60706 . - . ID=gene-L8R42_001376;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=L8R42_001376 DAFVNP010000016.1 Protein Homology CDS 58973 60706 . - 0 ID=cds-HBQ7389482.1;Parent=gene-L8R42_001376;Dbxref=NCBI_GP:HBQ7389482.1;Name=HBQ7389482.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=L8R42_001376;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=HBQ7389482.1;transl_table=11 DAFVNP010000016.1 tpg gene 60712 61425 . - . ID=gene-L8R42_001377;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=L8R42_001377 DAFVNP010000016.1 Protein Homology CDS 60712 61425 . - 0 ID=cds-HBQ7389483.1;Parent=gene-L8R42_001377;Dbxref=NCBI_GP:HBQ7389483.1;Name=HBQ7389483.1;gbkey=CDS;gene=dsbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=L8R42_001377;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=HBQ7389483.1;transl_table=11 DAFVNP010000016.1 tpg gene 61449 62345 . - . ID=gene-L8R42_001378;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=L8R42_001378 DAFVNP010000016.1 Protein Homology CDS 61449 62345 . - 0 ID=cds-HBQ7389484.1;Parent=gene-L8R42_001378;Dbxref=NCBI_GP:HBQ7389484.1;Name=HBQ7389484.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=L8R42_001378;product=site-specific tyrosine recombinase XerD;protein_id=HBQ7389484.1;transl_table=11 DAFVNP010000016.1 tpg gene 62458 62979 . + . ID=gene-L8R42_001379;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=L8R42_001379 DAFVNP010000016.1 Protein Homology CDS 62458 62979 . + 0 ID=cds-HBQ7389485.1;Parent=gene-L8R42_001379;Dbxref=NCBI_GP:HBQ7389485.1;Name=HBQ7389485.1;gbkey=CDS;gene=fldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=L8R42_001379;product=flavodoxin FldB;protein_id=HBQ7389485.1;transl_table=11 DAFVNP010000016.1 tpg gene 63032 63445 . - . ID=gene-L8R42_001380;Name=L8R42_001380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001380 DAFVNP010000016.1 Protein Homology CDS 63032 63445 . - 0 ID=cds-HBQ7389486.1;Parent=gene-L8R42_001380;Dbxref=NCBI_GP:HBQ7389486.1;Name=HBQ7389486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=L8R42_001380;product=protein YgfX;protein_id=HBQ7389486.1;transl_table=11 DAFVNP010000016.1 tpg gene 63426 63692 . - . ID=gene-L8R42_001381;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=L8R42_001381 DAFVNP010000016.1 Protein Homology CDS 63426 63692 . - 0 ID=cds-HBQ7389487.1;Parent=gene-L8R42_001381;Dbxref=NCBI_GP:HBQ7389487.1;Name=HBQ7389487.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=L8R42_001381;product=FAD assembly factor SdhE;protein_id=HBQ7389487.1;transl_table=11 DAFVNP010000016.1 tpg gene 63942 64922 . + . ID=gene-L8R42_001382;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=L8R42_001382 DAFVNP010000016.1 Protein Homology CDS 63942 64922 . + 0 ID=cds-HBQ7389488.1;Parent=gene-L8R42_001382;Dbxref=NCBI_GP:HBQ7389488.1;Name=HBQ7389488.1;gbkey=CDS;gene=ygfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=L8R42_001382;product=tRNA-modifying protein YgfZ;protein_id=HBQ7389488.1;transl_table=11 DAFVNP010000016.1 tpg gene 65038 65697 . - . ID=gene-L8R42_001383;Name=L8R42_001383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001383 DAFVNP010000016.1 Protein Homology CDS 65038 65697 . - 0 ID=cds-HBQ7389489.1;Parent=gene-L8R42_001383;Dbxref=NCBI_GP:HBQ7389489.1;Name=HBQ7389489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=L8R42_001383;product=hemolysin III family protein;protein_id=HBQ7389489.1;transl_table=11 DAFVNP010000016.1 tpg gene 65861 66172 . - . ID=gene-L8R42_001384;Name=L8R42_001384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001384 DAFVNP010000016.1 Protein Homology CDS 65861 66172 . - 0 ID=cds-HBQ7389490.1;Parent=gene-L8R42_001384;Dbxref=NCBI_GP:HBQ7389490.1;Name=HBQ7389490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=L8R42_001384;product=ASCH domain-containing protein;protein_id=HBQ7389490.1;transl_table=11 DAFVNP010000016.1 tpg gene 66330 67763 . + . ID=gene-L8R42_001385;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=L8R42_001385 DAFVNP010000016.1 Protein Homology CDS 66330 67763 . + 0 ID=cds-HBQ7389491.1;Parent=gene-L8R42_001385;Dbxref=NCBI_GP:HBQ7389491.1;Name=HBQ7389491.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=L8R42_001385;product=6-phospho-beta-glucosidase BglA;protein_id=HBQ7389491.1;transl_table=11 DAFVNP010000016.1 tpg gene 67811 68704 . - . ID=gene-L8R42_001386;Name=L8R42_001386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001386 DAFVNP010000016.1 Protein Homology CDS 67811 68704 . - 0 ID=cds-HBQ7389492.1;Parent=gene-L8R42_001386;Dbxref=NCBI_GP:HBQ7389492.1;Name=HBQ7389492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=L8R42_001386;product=transporter;protein_id=HBQ7389492.1;transl_table=11 ##sequence-region DAFVNP010000017.1 1 67973 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000017.1 tpg region 1 67973 . + . ID=DAFVNP010000017.1:1..67973;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000017.1 tpg gene 1 3554 . + . ID=gene-L8R42_001387;Name=L8R42_001387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001387;partial=true;start_range=.,1 DAFVNP010000017.1 Protein Homology CDS 1 3554 . + 2 ID=cds-HBQ7389493.1;Parent=gene-L8R42_001387;Dbxref=NCBI_GP:HBQ7389493.1;Name=HBQ7389493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=L8R42_001387;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HBQ7389493.1;start_range=.,1;transl_table=11 DAFVNP010000017.1 tpg gene 4256 6070 . + . ID=gene-L8R42_001388;Name=L8R42_001388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001388 DAFVNP010000017.1 Protein Homology CDS 4256 6070 . + 0 ID=cds-HBQ7389494.1;Parent=gene-L8R42_001388;Dbxref=NCBI_GP:HBQ7389494.1;Name=HBQ7389494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=L8R42_001388;product=VWA domain-containing protein;protein_id=HBQ7389494.1;transl_table=11 DAFVNP010000017.1 tpg gene 6111 7112 . - . ID=gene-L8R42_001389;Name=L8R42_001389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001389 DAFVNP010000017.1 Protein Homology CDS 6111 7112 . - 0 ID=cds-HBQ7389495.1;Parent=gene-L8R42_001389;Dbxref=NCBI_GP:HBQ7389495.1;Name=HBQ7389495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=L8R42_001389;product=chemotaxis protein CheV;protein_id=HBQ7389495.1;transl_table=11 DAFVNP010000017.1 tpg gene 7178 8095 . - . ID=gene-L8R42_001390;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=L8R42_001390 DAFVNP010000017.1 Protein Homology CDS 7178 8095 . - 0 ID=cds-HBQ7389496.1;Parent=gene-L8R42_001390;Dbxref=NCBI_GP:HBQ7389496.1;Name=HBQ7389496.1;gbkey=CDS;gene=rbn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=L8R42_001390;product=ribonuclease BN;protein_id=HBQ7389496.1;transl_table=11 DAFVNP010000017.1 tpg gene 8156 8617 . + . ID=gene-L8R42_001391;Name=L8R42_001391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001391 DAFVNP010000017.1 Protein Homology CDS 8156 8617 . + 0 ID=cds-HBQ7389497.1;Parent=gene-L8R42_001391;Dbxref=NCBI_GP:HBQ7389497.1;Name=HBQ7389497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=L8R42_001391;product=GNAT family N-acetyltransferase;protein_id=HBQ7389497.1;transl_table=11 DAFVNP010000017.1 tpg gene 8672 8977 . + . ID=gene-L8R42_001392;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=L8R42_001392 DAFVNP010000017.1 Protein Homology CDS 8672 8977 . + 0 ID=cds-HBQ7389498.1;Parent=gene-L8R42_001392;Dbxref=NCBI_GP:HBQ7389498.1;Name=HBQ7389498.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=L8R42_001392;product=stress response protein ElaB;protein_id=HBQ7389498.1;transl_table=11 DAFVNP010000017.1 tpg gene 9078 10373 . + . ID=gene-L8R42_001393;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=L8R42_001393 DAFVNP010000017.1 Protein Homology CDS 9078 10373 . + 0 ID=cds-HBQ7389499.1;Parent=gene-L8R42_001393;Dbxref=NCBI_GP:HBQ7389499.1;Name=HBQ7389499.1;gbkey=CDS;gene=menF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=L8R42_001393;product=isochorismate synthase MenF;protein_id=HBQ7389499.1;transl_table=11 DAFVNP010000017.1 tpg gene 10459 12129 . + . ID=gene-L8R42_001394;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=L8R42_001394 DAFVNP010000017.1 Protein Homology CDS 10459 12129 . + 0 ID=cds-HBQ7389500.1;Parent=gene-L8R42_001394;Dbxref=NCBI_GP:HBQ7389500.1;Name=HBQ7389500.1;gbkey=CDS;gene=menD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=L8R42_001394;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=HBQ7389500.1;transl_table=11 DAFVNP010000017.1 tpg gene 12126 12884 . + . ID=gene-L8R42_001395;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=L8R42_001395 DAFVNP010000017.1 Protein Homology CDS 12126 12884 . + 0 ID=cds-HBQ7389501.1;Parent=gene-L8R42_001395;Dbxref=NCBI_GP:HBQ7389501.1;Name=HBQ7389501.1;gbkey=CDS;gene=menH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=L8R42_001395;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=HBQ7389501.1;transl_table=11 DAFVNP010000017.1 tpg gene 12899 13756 . + . ID=gene-L8R42_001396;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=L8R42_001396 DAFVNP010000017.1 Protein Homology CDS 12899 13756 . + 0 ID=cds-HBQ7389502.1;Parent=gene-L8R42_001396;Dbxref=NCBI_GP:HBQ7389502.1;Name=HBQ7389502.1;gbkey=CDS;gene=menB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=L8R42_001396;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=HBQ7389502.1;transl_table=11 DAFVNP010000017.1 tpg gene 13756 14718 . + . ID=gene-L8R42_001397;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=L8R42_001397 DAFVNP010000017.1 Protein Homology CDS 13756 14718 . + 0 ID=cds-HBQ7389503.1;Parent=gene-L8R42_001397;Dbxref=NCBI_GP:HBQ7389503.1;Name=HBQ7389503.1;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=L8R42_001397;product=o-succinylbenzoate synthase;protein_id=HBQ7389503.1;transl_table=11 DAFVNP010000017.1 tpg gene 14715 16082 . + . ID=gene-L8R42_001398;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=L8R42_001398 DAFVNP010000017.1 Protein Homology CDS 14715 16082 . + 0 ID=cds-HBQ7389504.1;Parent=gene-L8R42_001398;Dbxref=NCBI_GP:HBQ7389504.1;Name=HBQ7389504.1;gbkey=CDS;gene=menE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=L8R42_001398;product=o-succinylbenzoate--CoA ligase;protein_id=HBQ7389504.1;transl_table=11 DAFVNP010000017.1 tpg gene 16180 16437 . + . ID=gene-L8R42_001399;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=L8R42_001399 DAFVNP010000017.1 Protein Homology CDS 16180 16437 . + 0 ID=cds-HBQ7389505.1;Parent=gene-L8R42_001399;Dbxref=NCBI_GP:HBQ7389505.1;Name=HBQ7389505.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=L8R42_001399;product=signal transduction protein PmrD;protein_id=HBQ7389505.1;transl_table=11 DAFVNP010000017.1 tpg gene 16432 16809 . - . ID=gene-L8R42_001400;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=L8R42_001400 DAFVNP010000017.1 Protein Homology CDS 16432 16809 . - 0 ID=cds-HBQ7389506.1;Parent=gene-L8R42_001400;Dbxref=NCBI_GP:HBQ7389506.1;Name=HBQ7389506.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=L8R42_001400;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=HBQ7389506.1;transl_table=11 DAFVNP010000017.1 tpg gene 16809 17144 . - . ID=gene-L8R42_001401;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=L8R42_001401 DAFVNP010000017.1 Protein Homology CDS 16809 17144 . - 0 ID=cds-HBQ7389507.1;Parent=gene-L8R42_001401;Dbxref=NCBI_GP:HBQ7389507.1;Name=HBQ7389507.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=L8R42_001401;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=HBQ7389507.1;transl_table=11 DAFVNP010000017.1 tpg gene 17141 18787 . - . ID=gene-L8R42_001402;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=L8R42_001402 DAFVNP010000017.1 Protein Homology CDS 17141 18787 . - 0 ID=cds-HBQ7389508.1;Parent=gene-L8R42_001402;Dbxref=NCBI_GP:HBQ7389508.1;Name=HBQ7389508.1;gbkey=CDS;gene=arnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=L8R42_001402;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=HBQ7389508.1;transl_table=11 DAFVNP010000017.1 tpg gene 18784 19683 . - . ID=gene-L8R42_001403;Name=L8R42_001403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001403 DAFVNP010000017.1 Protein Homology CDS 18784 19683 . - 0 ID=cds-HBQ7389509.1;Parent=gene-L8R42_001403;Dbxref=NCBI_GP:HBQ7389509.1;Name=HBQ7389509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=L8R42_001403;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=HBQ7389509.1;transl_table=11 DAFVNP010000017.1 tpg gene 19680 21662 . - . ID=gene-L8R42_001404;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=L8R42_001404 DAFVNP010000017.1 Protein Homology CDS 19680 21662 . - 0 ID=cds-HBQ7389510.1;Parent=gene-L8R42_001404;Dbxref=NCBI_GP:HBQ7389510.1;Name=HBQ7389510.1;gbkey=CDS;gene=arnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=L8R42_001404;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=HBQ7389510.1;transl_table=11 DAFVNP010000017.1 tpg gene 21659 22642 . - . ID=gene-L8R42_001405;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=L8R42_001405 DAFVNP010000017.1 Protein Homology CDS 21659 22642 . - 0 ID=cds-HBQ7389511.1;Parent=gene-L8R42_001405;Dbxref=NCBI_GP:HBQ7389511.1;Name=HBQ7389511.1;gbkey=CDS;gene=arnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=L8R42_001405;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=HBQ7389511.1;transl_table=11 DAFVNP010000017.1 tpg gene 22645 23784 . - . ID=gene-L8R42_001406;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=L8R42_001406 DAFVNP010000017.1 Protein Homology CDS 22645 23784 . - 0 ID=cds-HBQ7389512.1;Parent=gene-L8R42_001406;Dbxref=NCBI_GP:HBQ7389512.1;Name=HBQ7389512.1;gbkey=CDS;gene=arnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=L8R42_001406;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=HBQ7389512.1;transl_table=11 DAFVNP010000017.1 tpg gene 24083 24688 . + . ID=gene-L8R42_001407;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=L8R42_001407 DAFVNP010000017.1 Protein Homology CDS 24083 24688 . + 0 ID=cds-HBQ7389513.1;Parent=gene-L8R42_001407;Dbxref=NCBI_GP:HBQ7389513.1;Name=HBQ7389513.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=L8R42_001407;product=lipopolysaccharide core heptose(II)-phosphate phosphatase;protein_id=HBQ7389513.1;transl_table=11 DAFVNP010000017.1 tpg gene 24733 25158 . - . ID=gene-L8R42_001408;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=L8R42_001408 DAFVNP010000017.1 Protein Homology CDS 24733 25158 . - 0 ID=cds-HBQ7389514.1;Parent=gene-L8R42_001408;Dbxref=NCBI_GP:HBQ7389514.1;Name=HBQ7389514.1;gbkey=CDS;gene=nudI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=L8R42_001408;product=nucleoside triphosphatase NudI;protein_id=HBQ7389514.1;transl_table=11 DAFVNP010000017.1 tpg gene 25437 25979 . + . ID=gene-L8R42_001409;Name=L8R42_001409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001409 DAFVNP010000017.1 Protein Homology CDS 25437 25979 . + 0 ID=cds-HBQ7389515.1;Parent=gene-L8R42_001409;Dbxref=NCBI_GP:HBQ7389515.1;Name=HBQ7389515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=L8R42_001409;product=YfaZ family protein;protein_id=HBQ7389515.1;transl_table=11 DAFVNP010000017.1 tpg gene 26094 27290 . + . ID=gene-L8R42_001410;Name=L8R42_001410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001410 DAFVNP010000017.1 Protein Homology CDS 26094 27290 . + 0 ID=cds-HBQ7389516.1;Parent=gene-L8R42_001410;Dbxref=NCBI_GP:HBQ7389516.1;Name=HBQ7389516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=L8R42_001410;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=HBQ7389516.1;transl_table=11 DAFVNP010000017.1 tpg gene 27540 28322 . + . ID=gene-L8R42_001411;Name=L8R42_001411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001411 DAFVNP010000017.1 Protein Homology CDS 27540 28322 . + 0 ID=cds-HBQ7389517.1;Parent=gene-L8R42_001411;Dbxref=NCBI_GP:HBQ7389517.1;Name=HBQ7389517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=L8R42_001411;product=IclR family transcriptional regulator;protein_id=HBQ7389517.1;transl_table=11 DAFVNP010000017.1 tpg gene 28336 29541 . + . ID=gene-L8R42_001412;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=L8R42_001412 DAFVNP010000017.1 Protein Homology CDS 28336 29541 . + 0 ID=cds-HBQ7389518.1;Parent=gene-L8R42_001412;Dbxref=NCBI_GP:HBQ7389518.1;Name=HBQ7389518.1;gbkey=CDS;gene=rhmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=L8R42_001412;product=L-rhamnonate dehydratase;protein_id=HBQ7389518.1;transl_table=11 DAFVNP010000017.1 tpg gene 29597 30886 . + . ID=gene-L8R42_001413;Name=L8R42_001413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001413 DAFVNP010000017.1 Protein Homology CDS 29597 30886 . + 0 ID=cds-HBQ7389519.1;Parent=gene-L8R42_001413;Dbxref=NCBI_GP:HBQ7389519.1;Name=HBQ7389519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=L8R42_001413;product=MFS transporter;protein_id=HBQ7389519.1;transl_table=11 DAFVNP010000017.1 tpg gene 30912 31715 . + . ID=gene-L8R42_001414;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=L8R42_001414 DAFVNP010000017.1 Protein Homology CDS 30912 31715 . + 0 ID=cds-HBQ7389520.1;Parent=gene-L8R42_001414;Dbxref=NCBI_GP:HBQ7389520.1;Name=HBQ7389520.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=L8R42_001414;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=HBQ7389520.1;transl_table=11 DAFVNP010000017.1 tpg gene 31721 31897 . + . ID=gene-L8R42_001415;Name=L8R42_001415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001415 DAFVNP010000017.1 Protein Homology CDS 31721 31897 . + 0 ID=cds-HBQ7389521.1;Parent=gene-L8R42_001415;Dbxref=NCBI_GP:HBQ7389521.1;Name=HBQ7389521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=L8R42_001415;product=molybdopterin-binding protein;protein_id=HBQ7389521.1;transl_table=11 DAFVNP010000017.1 tpg gene 32131 33153 . - . ID=gene-L8R42_001416;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=L8R42_001416 DAFVNP010000017.1 Protein Homology CDS 32131 33153 . - 0 ID=cds-HBQ7389522.1;Parent=gene-L8R42_001416;Dbxref=NCBI_GP:HBQ7389522.1;Name=HBQ7389522.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=L8R42_001416;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=HBQ7389522.1;transl_table=11 DAFVNP010000017.1 tpg gene 33579 34769 . - . ID=gene-L8R42_001417;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=L8R42_001417 DAFVNP010000017.1 Protein Homology CDS 33579 34769 . - 0 ID=cds-HBQ7389523.1;Parent=gene-L8R42_001417;Dbxref=NCBI_GP:HBQ7389523.1;Name=HBQ7389523.1;gbkey=CDS;gene=glpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=L8R42_001417;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;protein_id=HBQ7389523.1;transl_table=11 DAFVNP010000017.1 tpg gene 34766 36025 . - . ID=gene-L8R42_001418;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=L8R42_001418 DAFVNP010000017.1 Protein Homology CDS 34766 36025 . - 0 ID=cds-HBQ7389524.1;Parent=gene-L8R42_001418;Dbxref=NCBI_GP:HBQ7389524.1;Name=HBQ7389524.1;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=L8R42_001418;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=HBQ7389524.1;transl_table=11 DAFVNP010000017.1 tpg gene 36015 37643 . - . ID=gene-L8R42_001419;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=L8R42_001419 DAFVNP010000017.1 Protein Homology CDS 36015 37643 . - 0 ID=cds-HBQ7389525.1;Parent=gene-L8R42_001419;Dbxref=NCBI_GP:HBQ7389525.1;Name=HBQ7389525.1;gbkey=CDS;gene=glpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=L8R42_001419;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=HBQ7389525.1;transl_table=11 DAFVNP010000017.1 tpg gene 37916 39274 . + . ID=gene-L8R42_001420;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=L8R42_001420 DAFVNP010000017.1 Protein Homology CDS 37916 39274 . + 0 ID=cds-HBQ7389526.1;Parent=gene-L8R42_001420;Dbxref=NCBI_GP:HBQ7389526.1;Name=HBQ7389526.1;gbkey=CDS;gene=glpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=L8R42_001420;product=glycerol-3-phosphate transporter;protein_id=HBQ7389526.1;transl_table=11 DAFVNP010000017.1 tpg gene 39279 40349 . + . ID=gene-L8R42_001421;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=L8R42_001421 DAFVNP010000017.1 Protein Homology CDS 39279 40349 . + 0 ID=cds-HBQ7389527.1;Parent=gene-L8R42_001421;Dbxref=NCBI_GP:HBQ7389527.1;Name=HBQ7389527.1;gbkey=CDS;gene=glpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=L8R42_001421;product=glycerophosphodiester phosphodiesterase;protein_id=HBQ7389527.1;transl_table=11 DAFVNP010000017.1 tpg gene 40465 41343 . - . ID=gene-L8R42_001422;Name=L8R42_001422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001422 DAFVNP010000017.1 Protein Homology CDS 40465 41343 . - 0 ID=cds-HBQ7389528.1;Parent=gene-L8R42_001422;Dbxref=NCBI_GP:HBQ7389528.1;Name=HBQ7389528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=L8R42_001422;product=LysR family transcriptional regulator;protein_id=HBQ7389528.1;transl_table=11 DAFVNP010000017.1 tpg gene 41505 42695 . + . ID=gene-L8R42_001423;Name=L8R42_001423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001423 DAFVNP010000017.1 Protein Homology CDS 41505 42695 . + 0 ID=cds-HBQ7389529.1;Parent=gene-L8R42_001423;Dbxref=NCBI_GP:HBQ7389529.1;Name=HBQ7389529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=L8R42_001423;product=MFS transporter;protein_id=HBQ7389529.1;transl_table=11 DAFVNP010000017.1 tpg gene 42697 42951 . - . ID=gene-L8R42_001424;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=L8R42_001424 DAFVNP010000017.1 Protein Homology CDS 42697 42951 . - 0 ID=cds-HBQ7389530.1;Parent=gene-L8R42_001424;Dbxref=NCBI_GP:HBQ7389530.1;Name=HBQ7389530.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=L8R42_001424;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=HBQ7389530.1;transl_table=11 DAFVNP010000017.1 tpg gene 42951 44081 . - . ID=gene-L8R42_001425;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=L8R42_001425 DAFVNP010000017.1 Protein Homology CDS 42951 44081 . - 0 ID=cds-HBQ7389531.1;Parent=gene-L8R42_001425;Dbxref=NCBI_GP:HBQ7389531.1;Name=HBQ7389531.1;gbkey=CDS;gene=nrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=L8R42_001425;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=HBQ7389531.1;transl_table=11 DAFVNP010000017.1 tpg gene 44194 46479 . - . ID=gene-L8R42_001426;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=L8R42_001426 DAFVNP010000017.1 Protein Homology CDS 44194 46479 . - 0 ID=cds-HBQ7389532.1;Parent=gene-L8R42_001426;Dbxref=NCBI_GP:HBQ7389532.1;Name=HBQ7389532.1;gbkey=CDS;gene=nrdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=L8R42_001426;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=HBQ7389532.1;transl_table=11 DAFVNP010000017.1 tpg gene 46835 47563 . - . ID=gene-L8R42_001427;Name=L8R42_001427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001427 DAFVNP010000017.1 Protein Homology CDS 46835 47563 . - 0 ID=cds-HBQ7389533.1;Parent=gene-L8R42_001427;Dbxref=NCBI_GP:HBQ7389533.1;Name=HBQ7389533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=L8R42_001427;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=HBQ7389533.1;transl_table=11 DAFVNP010000017.1 tpg gene 47646 48530 . - . ID=gene-L8R42_001428;Name=L8R42_001428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001428 DAFVNP010000017.1 Protein Homology CDS 47646 48530 . - 0 ID=cds-HBQ7389534.1;Parent=gene-L8R42_001428;Dbxref=NCBI_GP:HBQ7389534.1;Name=HBQ7389534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=L8R42_001428;product=GntR family transcriptional regulator;protein_id=HBQ7389534.1;transl_table=11 DAFVNP010000017.1 tpg gene 48580 49905 . + . ID=gene-L8R42_001429;Name=L8R42_001429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001429 DAFVNP010000017.1 Protein Homology CDS 48580 49905 . + 0 ID=cds-HBQ7389535.1;Parent=gene-L8R42_001429;Dbxref=NCBI_GP:HBQ7389535.1;Name=HBQ7389535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=L8R42_001429;product=MFS transporter;protein_id=HBQ7389535.1;transl_table=11 DAFVNP010000017.1 tpg gene 49920 51122 . + . ID=gene-L8R42_001430;Name=L8R42_001430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001430 DAFVNP010000017.1 Protein Homology CDS 49920 51122 . + 0 ID=cds-HBQ7389536.1;Parent=gene-L8R42_001430;Dbxref=NCBI_GP:HBQ7389536.1;Name=HBQ7389536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=L8R42_001430;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=HBQ7389536.1;transl_table=11 DAFVNP010000017.1 tpg gene 51532 54168 . + . ID=gene-L8R42_001431;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=L8R42_001431 DAFVNP010000017.1 Protein Homology CDS 51532 54168 . + 0 ID=cds-HBQ7389537.1;Parent=gene-L8R42_001431;Dbxref=NCBI_GP:HBQ7389537.1;Name=HBQ7389537.1;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=L8R42_001431;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=HBQ7389537.1;transl_table=11 DAFVNP010000017.1 tpg gene 54286 57132 . + . ID=gene-L8R42_001432;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=L8R42_001432 DAFVNP010000017.1 Protein Homology CDS 54286 57132 . + 0 ID=cds-HBQ7389538.1;Parent=gene-L8R42_001432;Dbxref=NCBI_GP:HBQ7389538.1;Name=HBQ7389538.1;gbkey=CDS;gene=rcsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=L8R42_001432;product=two-component system sensor histidine kinase RcsC;protein_id=HBQ7389538.1;transl_table=11 DAFVNP010000017.1 tpg gene 57235 57885 . - . ID=gene-L8R42_001433;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=L8R42_001433 DAFVNP010000017.1 Protein Homology CDS 57235 57885 . - 0 ID=cds-HBQ7389539.1;Parent=gene-L8R42_001433;Dbxref=NCBI_GP:HBQ7389539.1;Name=HBQ7389539.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=L8R42_001433;product=transcriptional regulator RcsB;protein_id=HBQ7389539.1;transl_table=11 DAFVNP010000017.1 tpg gene 57902 60571 . - . ID=gene-L8R42_001434;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=L8R42_001434 DAFVNP010000017.1 Protein Homology CDS 57902 60571 . - 0 ID=cds-HBQ7389540.1;Parent=gene-L8R42_001434;Dbxref=NCBI_GP:HBQ7389540.1;Name=HBQ7389540.1;gbkey=CDS;gene=rcsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=L8R42_001434;product=phosphotransferase RcsD;protein_id=HBQ7389540.1;transl_table=11 DAFVNP010000017.1 tpg gene 61299 62435 . + . ID=gene-L8R42_001435;Name=L8R42_001435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001435 DAFVNP010000017.1 Protein Homology CDS 61299 62435 . + 0 ID=cds-HBQ7389541.1;Parent=gene-L8R42_001435;Dbxref=NCBI_GP:HBQ7389541.1;Name=HBQ7389541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=L8R42_001435;product=porin OmpC;protein_id=HBQ7389541.1;transl_table=11 DAFVNP010000017.1 tpg gene 62550 63602 . + . ID=gene-L8R42_001436;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=L8R42_001436 DAFVNP010000017.1 Protein Homology CDS 62550 63602 . + 0 ID=cds-HBQ7389542.1;Parent=gene-L8R42_001436;Dbxref=NCBI_GP:HBQ7389542.1;Name=HBQ7389542.1;gbkey=CDS;gene=apbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=L8R42_001436;product=FAD:protein FMN transferase ApbE;protein_id=HBQ7389542.1;transl_table=11 DAFVNP010000017.1 tpg gene 63683 64744 . + . ID=gene-L8R42_001437;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=L8R42_001437 DAFVNP010000017.1 Protein Homology CDS 63683 64744 . + 0 ID=cds-HBQ7389543.1;Parent=gene-L8R42_001437;Dbxref=NCBI_GP:HBQ7389543.1;Name=HBQ7389543.1;gbkey=CDS;gene=ada;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=L8R42_001437;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=HBQ7389543.1;transl_table=11 DAFVNP010000017.1 tpg gene 64747 65397 . + . ID=gene-L8R42_001438;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=L8R42_001438 DAFVNP010000017.1 Protein Homology CDS 64747 65397 . + 0 ID=cds-HBQ7389544.1;Parent=gene-L8R42_001438;Dbxref=NCBI_GP:HBQ7389544.1;Name=HBQ7389544.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=L8R42_001438;product=DNA oxidative demethylase AlkB;protein_id=HBQ7389544.1;transl_table=11 DAFVNP010000017.1 tpg gene 65473 67116 . + . ID=gene-L8R42_001439;Name=L8R42_001439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001439 DAFVNP010000017.1 Protein Homology CDS 65473 67116 . + 0 ID=cds-HBQ7389545.1;Parent=gene-L8R42_001439;Dbxref=NCBI_GP:HBQ7389545.1;Name=HBQ7389545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=L8R42_001439;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=HBQ7389545.1;transl_table=11 DAFVNP010000017.1 tpg gene 67316 67810 . - . ID=gene-L8R42_001440;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=L8R42_001440 DAFVNP010000017.1 Protein Homology CDS 67316 67810 . - 0 ID=cds-HBQ7389546.1;Parent=gene-L8R42_001440;Dbxref=NCBI_GP:HBQ7389546.1;Name=HBQ7389546.1;gbkey=CDS;gene=eco;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=L8R42_001440;product=serine protease inhibitor ecotin;protein_id=HBQ7389546.1;transl_table=11 ##sequence-region DAFVNP010000018.1 1 64243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000018.1 tpg region 1 64243 . + . ID=DAFVNP010000018.1:1..64243;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000018.1 tpg pseudogene 1 301 . + . ID=gene-L8R42_001441;Name=L8R42_001441;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001441;pseudo=true DAFVNP010000018.1 Protein Homology CDS 1 301 . + 0 ID=cds-L8R42_001441;Parent=gene-L8R42_001441;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=L8R42_001441;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000018.1 tpg gene 803 2377 . + . ID=gene-L8R42_001442;Name=L8R42_001442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001442 DAFVNP010000018.1 Protein Homology CDS 803 2377 . + 0 ID=cds-HBQ7389547.1;Parent=gene-L8R42_001442;Dbxref=NCBI_GP:HBQ7389547.1;Name=HBQ7389547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=L8R42_001442;product=cyclic diguanylate phosphodiesterase;protein_id=HBQ7389547.1;transl_table=11 DAFVNP010000018.1 tpg gene 2477 3220 . + . ID=gene-L8R42_001443;Name=L8R42_001443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001443 DAFVNP010000018.1 Protein Homology CDS 2477 3220 . + 0 ID=cds-HBQ7389548.1;Parent=gene-L8R42_001443;Dbxref=NCBI_GP:HBQ7389548.1;Name=HBQ7389548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=L8R42_001443;product=response regulator;protein_id=HBQ7389548.1;transl_table=11 DAFVNP010000018.1 tpg gene 3193 3681 . + . ID=gene-L8R42_001444;Name=L8R42_001444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001444 DAFVNP010000018.1 Protein Homology CDS 3193 3681 . + 0 ID=cds-HBQ7389549.1;Parent=gene-L8R42_001444;Dbxref=NCBI_GP:HBQ7389549.1;Name=HBQ7389549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=L8R42_001444;product=hypothetical protein;protein_id=HBQ7389549.1;transl_table=11 DAFVNP010000018.1 tpg gene 4083 4607 . + . ID=gene-L8R42_001445;Name=L8R42_001445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001445 DAFVNP010000018.1 Protein Homology CDS 4083 4607 . + 0 ID=cds-HBQ7389550.1;Parent=gene-L8R42_001445;Dbxref=NCBI_GP:HBQ7389550.1;Name=HBQ7389550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=L8R42_001445;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=HBQ7389550.1;transl_table=11 DAFVNP010000018.1 tpg gene 4751 5392 . + . ID=gene-L8R42_001446;Name=L8R42_001446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001446 DAFVNP010000018.1 Protein Homology CDS 4751 5392 . + 0 ID=cds-HBQ7389551.1;Parent=gene-L8R42_001446;Dbxref=NCBI_GP:HBQ7389551.1;Name=HBQ7389551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=L8R42_001446;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7389551.1;transl_table=11 DAFVNP010000018.1 tpg gene 5403 5627 . + . ID=gene-L8R42_001447;Name=L8R42_001447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001447 DAFVNP010000018.1 Protein Homology CDS 5403 5627 . + 0 ID=cds-HBQ7389552.1;Parent=gene-L8R42_001447;Dbxref=NCBI_GP:HBQ7389552.1;Name=HBQ7389552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=L8R42_001447;product=hypothetical protein;protein_id=HBQ7389552.1;transl_table=11 DAFVNP010000018.1 tpg gene 5685 6044 . + . ID=gene-L8R42_001448;Name=L8R42_001448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001448 DAFVNP010000018.1 Protein Homology CDS 5685 6044 . + 0 ID=cds-HBQ7389553.1;Parent=gene-L8R42_001448;Dbxref=NCBI_GP:HBQ7389553.1;Name=HBQ7389553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=L8R42_001448;product=DUF4156 domain-containing protein;protein_id=HBQ7389553.1;transl_table=11 DAFVNP010000018.1 tpg gene 6114 7571 . - . ID=gene-L8R42_001449;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=L8R42_001449 DAFVNP010000018.1 Protein Homology CDS 6114 7571 . - 0 ID=cds-HBQ7389554.1;Parent=gene-L8R42_001449;Dbxref=NCBI_GP:HBQ7389554.1;Name=HBQ7389554.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=L8R42_001449;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=HBQ7389554.1;transl_table=11 DAFVNP010000018.1 tpg gene 7588 10755 . - . ID=gene-L8R42_001450;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=L8R42_001450 DAFVNP010000018.1 Protein Homology CDS 7588 10755 . - 0 ID=cds-HBQ7389555.1;Parent=gene-L8R42_001450;Dbxref=NCBI_GP:HBQ7389555.1;Name=HBQ7389555.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=L8R42_001450;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=HBQ7389555.1;transl_table=11 DAFVNP010000018.1 tpg gene 10752 11978 . - . ID=gene-L8R42_001451;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=L8R42_001451 DAFVNP010000018.1 Protein Homology CDS 10752 11978 . - 0 ID=cds-HBQ7389556.1;Parent=gene-L8R42_001451;Dbxref=NCBI_GP:HBQ7389556.1;Name=HBQ7389556.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=L8R42_001451;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=HBQ7389556.1;transl_table=11 DAFVNP010000018.1 tpg gene 12255 14543 . + . ID=gene-L8R42_001452;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=L8R42_001452 DAFVNP010000018.1 Protein Homology CDS 12255 14543 . + 0 ID=cds-HBQ7389557.1;Parent=gene-L8R42_001452;Dbxref=NCBI_GP:HBQ7389557.1;Name=HBQ7389557.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459348.1;locus_tag=L8R42_001452;product=gold/copper-translocating P-type ATPase GolT;protein_id=HBQ7389557.1;transl_table=11 DAFVNP010000018.1 tpg gene 14555 15019 . + . ID=gene-L8R42_001453;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=L8R42_001453 DAFVNP010000018.1 Protein Homology CDS 14555 15019 . + 0 ID=cds-HBQ7389558.1;Parent=gene-L8R42_001453;Dbxref=NCBI_GP:HBQ7389558.1;Name=HBQ7389558.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=L8R42_001453;product=Au(I) sensor transcriptional regulator GolS;protein_id=HBQ7389558.1;transl_table=11 DAFVNP010000018.1 tpg gene 15097 15291 . + . ID=gene-L8R42_001454;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=L8R42_001454 DAFVNP010000018.1 Protein Homology CDS 15097 15291 . + 0 ID=cds-HBQ7389559.1;Parent=gene-L8R42_001454;Dbxref=NCBI_GP:HBQ7389559.1;Name=HBQ7389559.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=L8R42_001454;product=gold resistance metallochaperone GolB;protein_id=HBQ7389559.1;transl_table=11 DAFVNP010000018.1 tpg gene 15582 16835 . + . ID=gene-L8R42_001455;Name=L8R42_001455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001455 DAFVNP010000018.1 Protein Homology CDS 15582 16835 . + 0 ID=cds-HBQ7389560.1;Parent=gene-L8R42_001455;Dbxref=NCBI_GP:HBQ7389560.1;Name=HBQ7389560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=L8R42_001455;product=MFS transporter;protein_id=HBQ7389560.1;transl_table=11 DAFVNP010000018.1 tpg gene 17024 18982 . + . ID=gene-L8R42_001456;Name=L8R42_001456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001456 DAFVNP010000018.1 Protein Homology CDS 17024 18982 . + 0 ID=cds-HBQ7389561.1;Parent=gene-L8R42_001456;Dbxref=NCBI_GP:HBQ7389561.1;Name=HBQ7389561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=L8R42_001456;product=site-specific DNA-methyltransferase;protein_id=HBQ7389561.1;transl_table=11 DAFVNP010000018.1 tpg gene 18992 21964 . + . ID=gene-L8R42_001457;Name=L8R42_001457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001457 DAFVNP010000018.1 Protein Homology CDS 18992 21964 . + 0 ID=cds-HBQ7389562.1;Parent=gene-L8R42_001457;Dbxref=NCBI_GP:HBQ7389562.1;Name=HBQ7389562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=L8R42_001457;product=type III restriction-modification system endonuclease;protein_id=HBQ7389562.1;transl_table=11 DAFVNP010000018.1 tpg gene 22241 22342 . + . ID=gene-L8R42_001458;Name=L8R42_001458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001458 DAFVNP010000018.1 Protein Homology CDS 22241 22342 . + 0 ID=cds-HBQ7389563.1;Parent=gene-L8R42_001458;Dbxref=NCBI_GP:HBQ7389563.1;Name=HBQ7389563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=L8R42_001458;product=hypothetical protein;protein_id=HBQ7389563.1;transl_table=11 DAFVNP010000018.1 tpg gene 22459 23862 . + . ID=gene-L8R42_001459;Name=L8R42_001459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001459 DAFVNP010000018.1 Protein Homology CDS 22459 23862 . + 0 ID=cds-HBQ7389564.1;Parent=gene-L8R42_001459;Dbxref=NCBI_GP:HBQ7389564.1;Name=HBQ7389564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=L8R42_001459;product=cytochrome ubiquinol oxidase subunit I;protein_id=HBQ7389564.1;transl_table=11 DAFVNP010000018.1 tpg gene 23859 24869 . + . ID=gene-L8R42_001460;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=L8R42_001460 DAFVNP010000018.1 Protein Homology CDS 23859 24869 . + 0 ID=cds-HBQ7389565.1;Parent=gene-L8R42_001460;Dbxref=NCBI_GP:HBQ7389565.1;Name=HBQ7389565.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=L8R42_001460;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HBQ7389565.1;transl_table=11 DAFVNP010000018.1 tpg gene 24869 25000 . + . ID=gene-L8R42_001461;Name=L8R42_001461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001461 DAFVNP010000018.1 Protein Homology CDS 24869 25000 . + 0 ID=cds-HBQ7389566.1;Parent=gene-L8R42_001461;Dbxref=NCBI_GP:HBQ7389566.1;Name=HBQ7389566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.2;locus_tag=L8R42_001461;product=DUF2474 domain-containing protein;protein_id=HBQ7389566.1;transl_table=11 DAFVNP010000018.1 tpg gene 25206 26210 . + . ID=gene-L8R42_001462;Name=L8R42_001462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001462 DAFVNP010000018.1 Protein Homology CDS 25206 26210 . + 0 ID=cds-HBQ7389567.1;Parent=gene-L8R42_001462;Dbxref=NCBI_GP:HBQ7389567.1;Name=HBQ7389567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=L8R42_001462;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7389567.1;transl_table=11 DAFVNP010000018.1 tpg gene 26356 28464 . + . ID=gene-L8R42_001463;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=L8R42_001463 DAFVNP010000018.1 Protein Homology CDS 26356 28464 . + 0 ID=cds-HBQ7389568.1;Parent=gene-L8R42_001463;Dbxref=NCBI_GP:HBQ7389568.1;Name=HBQ7389568.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=L8R42_001463;product=ferrioxamine B receptor FoxA;protein_id=HBQ7389568.1;transl_table=11 DAFVNP010000018.1 tpg gene 28503 29135 . - . ID=gene-L8R42_001464;Name=L8R42_001464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001464 DAFVNP010000018.1 Protein Homology CDS 28503 29135 . - 0 ID=cds-HBQ7389569.1;Parent=gene-L8R42_001464;Dbxref=NCBI_GP:HBQ7389569.1;Name=HBQ7389569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=L8R42_001464;product=LysE family transporter;protein_id=HBQ7389569.1;transl_table=11 DAFVNP010000018.1 tpg gene 29367 29642 . + . ID=gene-L8R42_001465;Name=L8R42_001465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001465 DAFVNP010000018.1 Protein Homology CDS 29367 29642 . + 0 ID=cds-HBQ7389570.1;Parent=gene-L8R42_001465;Dbxref=NCBI_GP:HBQ7389570.1;Name=HBQ7389570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=L8R42_001465;product=DUF1471 domain-containing protein;protein_id=HBQ7389570.1;transl_table=11 DAFVNP010000018.1 tpg gene 29778 31403 . - . ID=gene-L8R42_001466;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=L8R42_001466 DAFVNP010000018.1 Protein Homology CDS 29778 31403 . - 0 ID=cds-HBQ7389571.1;Parent=gene-L8R42_001466;Dbxref=NCBI_GP:HBQ7389571.1;Name=HBQ7389571.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=L8R42_001466;product=propionate catabolism operon regulatory protein PrpR;protein_id=HBQ7389571.1;transl_table=11 DAFVNP010000018.1 tpg gene 31669 32556 . + . ID=gene-L8R42_001467;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=L8R42_001467 DAFVNP010000018.1 Protein Homology CDS 31669 32556 . + 0 ID=cds-HBQ7389572.1;Parent=gene-L8R42_001467;Dbxref=NCBI_GP:HBQ7389572.1;Name=HBQ7389572.1;gbkey=CDS;gene=prpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=L8R42_001467;product=methylisocitrate lyase;protein_id=HBQ7389572.1;transl_table=11 DAFVNP010000018.1 tpg gene 32679 33848 . + . ID=gene-L8R42_001468;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=L8R42_001468 DAFVNP010000018.1 Protein Homology CDS 32679 33848 . + 0 ID=cds-HBQ7389573.1;Parent=gene-L8R42_001468;Dbxref=NCBI_GP:HBQ7389573.1;Name=HBQ7389573.1;gbkey=CDS;gene=prpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=L8R42_001468;product=2-methylcitrate synthase;protein_id=HBQ7389573.1;transl_table=11 DAFVNP010000018.1 tpg gene 33888 35339 . + . ID=gene-L8R42_001469;Name=L8R42_001469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001469 DAFVNP010000018.1 Protein Homology CDS 33888 35339 . + 0 ID=cds-HBQ7389574.1;Parent=gene-L8R42_001469;Dbxref=NCBI_GP:HBQ7389574.1;Name=HBQ7389574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=L8R42_001469;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=HBQ7389574.1;transl_table=11 DAFVNP010000018.1 tpg gene 35380 37266 . + . ID=gene-L8R42_001470;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=L8R42_001470 DAFVNP010000018.1 Protein Homology CDS 35380 37266 . + 0 ID=cds-HBQ7389575.1;Parent=gene-L8R42_001470;Dbxref=NCBI_GP:HBQ7389575.1;Name=HBQ7389575.1;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=L8R42_001470;product=propionate--CoA ligase;protein_id=HBQ7389575.1;transl_table=11 DAFVNP010000018.1 tpg gene 37370 38344 . - . ID=gene-L8R42_001471;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=L8R42_001471 DAFVNP010000018.1 Protein Homology CDS 37370 38344 . - 0 ID=cds-HBQ7389576.1;Parent=gene-L8R42_001471;Dbxref=NCBI_GP:HBQ7389576.1;Name=HBQ7389576.1;gbkey=CDS;gene=hemB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=L8R42_001471;product=porphobilinogen synthase;protein_id=HBQ7389576.1;transl_table=11 DAFVNP010000018.1 tpg gene 38857 41679 . + . ID=gene-L8R42_001472;Name=L8R42_001472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001472 DAFVNP010000018.1 Protein Homology CDS 38857 41679 . + 0 ID=cds-HBQ7389577.1;Parent=gene-L8R42_001472;Dbxref=NCBI_GP:HBQ7389577.1;Name=HBQ7389577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556401.1;locus_tag=L8R42_001472;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HBQ7389577.1;transl_table=11 DAFVNP010000018.1 tpg gene 41765 42388 . + . ID=gene-L8R42_001473;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=L8R42_001473 DAFVNP010000018.1 Protein Homology CDS 41765 42388 . + 0 ID=cds-HBQ7389578.1;Parent=gene-L8R42_001473;Dbxref=NCBI_GP:HBQ7389578.1;Name=HBQ7389578.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=L8R42_001473;product=hydrogen peroxide resistance inhibitor IprA;protein_id=HBQ7389578.1;transl_table=11 DAFVNP010000018.1 tpg gene 42433 43590 . - . ID=gene-L8R42_001474;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=L8R42_001474 DAFVNP010000018.1 Protein Homology CDS 42433 43590 . - 0 ID=cds-HBQ7389579.1;Parent=gene-L8R42_001474;Dbxref=NCBI_GP:HBQ7389579.1;Name=HBQ7389579.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=L8R42_001474;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=HBQ7389579.1;transl_table=11 DAFVNP010000018.1 tpg gene 43937 45157 . + . ID=gene-L8R42_001475;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=L8R42_001475 DAFVNP010000018.1 Protein Homology CDS 43937 45157 . + 0 ID=cds-HBQ7389580.1;Parent=gene-L8R42_001475;Dbxref=NCBI_GP:HBQ7389580.1;Name=HBQ7389580.1;gbkey=CDS;gene=sbmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=L8R42_001475;product=peptide antibiotic transporter SbmA;protein_id=HBQ7389580.1;transl_table=11 DAFVNP010000018.1 tpg gene 45172 46266 . + . ID=gene-L8R42_001476;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=L8R42_001476 DAFVNP010000018.1 Protein Homology CDS 45172 46266 . + 0 ID=cds-HBQ7389581.1;Parent=gene-L8R42_001476;Dbxref=NCBI_GP:HBQ7389581.1;Name=HBQ7389581.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=L8R42_001476;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=HBQ7389581.1;transl_table=11 DAFVNP010000018.1 tpg gene 46304 46612 . - . ID=gene-L8R42_001477;Name=L8R42_001477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001477 DAFVNP010000018.1 Protein Homology CDS 46304 46612 . - 0 ID=cds-HBQ7389582.1;Parent=gene-L8R42_001477;Dbxref=NCBI_GP:HBQ7389582.1;Name=HBQ7389582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=L8R42_001477;product=YaiY family protein;protein_id=HBQ7389582.1;transl_table=11 DAFVNP010000018.1 tpg gene 46880 47095 . + . ID=gene-L8R42_001478;Name=L8R42_001478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001478 DAFVNP010000018.1 Protein Homology CDS 46880 47095 . + 0 ID=cds-HBQ7389583.1;Parent=gene-L8R42_001478;Dbxref=NCBI_GP:HBQ7389583.1;Name=HBQ7389583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=L8R42_001478;product=DUF2754 family protein;protein_id=HBQ7389583.1;transl_table=11 DAFVNP010000018.1 tpg gene 47121 48215 . - . ID=gene-L8R42_001479;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=L8R42_001479 DAFVNP010000018.1 Protein Homology CDS 47121 48215 . - 0 ID=cds-HBQ7389584.1;Parent=gene-L8R42_001479;Dbxref=NCBI_GP:HBQ7389584.1;Name=HBQ7389584.1;gbkey=CDS;gene=ddlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=L8R42_001479;product=D-alanine--D-alanine ligase;protein_id=HBQ7389584.1;transl_table=11 DAFVNP010000018.1 tpg gene 48293 49006 . + . ID=gene-L8R42_001480;Name=L8R42_001480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001480 DAFVNP010000018.1 Protein Homology CDS 48293 49006 . + 0 ID=cds-HBQ7389585.1;Parent=gene-L8R42_001480;Dbxref=NCBI_GP:HBQ7389585.1;Name=HBQ7389585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=L8R42_001480;product=extensin family protein;protein_id=HBQ7389585.1;transl_table=11 DAFVNP010000018.1 tpg gene 49175 50386 . + . ID=gene-L8R42_001481;Name=L8R42_001481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001481 DAFVNP010000018.1 Protein Homology CDS 49175 50386 . + 0 ID=cds-HBQ7389586.1;Parent=gene-L8R42_001481;Dbxref=NCBI_GP:HBQ7389586.1;Name=HBQ7389586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=L8R42_001481;product=multidrug efflux MFS transporter;protein_id=HBQ7389586.1;transl_table=11 DAFVNP010000018.1 tpg gene 50683 50943 . + . ID=gene-L8R42_001482;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=L8R42_001482 DAFVNP010000018.1 Protein Homology CDS 50683 50943 . + 0 ID=cds-HBQ7389587.1;Parent=gene-L8R42_001482;Dbxref=NCBI_GP:HBQ7389587.1;Name=HBQ7389587.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=L8R42_001482;product=anti-adapter protein IraP;protein_id=HBQ7389587.1;transl_table=11 DAFVNP010000018.1 tpg gene 51296 51616 . + . ID=gene-L8R42_001483;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=L8R42_001483 DAFVNP010000018.1 Protein Homology CDS 51296 51616 . + 0 ID=cds-HBQ7389588.1;Parent=gene-L8R42_001483;Dbxref=NCBI_GP:HBQ7389588.1;Name=HBQ7389588.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=L8R42_001483;product=phosphate starvation-inducible protein PsiF;protein_id=HBQ7389588.1;transl_table=11 DAFVNP010000018.1 tpg gene 51708 52820 . + . ID=gene-L8R42_001484;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=L8R42_001484 DAFVNP010000018.1 Protein Homology CDS 51708 52820 . + 0 ID=cds-HBQ7389589.1;Parent=gene-L8R42_001484;Dbxref=NCBI_GP:HBQ7389589.1;Name=HBQ7389589.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=L8R42_001484;product=diguanylate cyclase AdrA;protein_id=HBQ7389589.1;transl_table=11 DAFVNP010000018.1 tpg gene 52835 53644 . - . ID=gene-L8R42_001485;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=L8R42_001485 DAFVNP010000018.1 Protein Homology CDS 52835 53644 . - 0 ID=cds-HBQ7389590.1;Parent=gene-L8R42_001485;Dbxref=NCBI_GP:HBQ7389590.1;Name=HBQ7389590.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=L8R42_001485;product=pyrroline-5-carboxylate reductase;protein_id=HBQ7389590.1;transl_table=11 DAFVNP010000018.1 tpg gene 53784 54239 . + . ID=gene-L8R42_001486;Name=L8R42_001486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001486 DAFVNP010000018.1 Protein Homology CDS 53784 54239 . + 0 ID=cds-HBQ7389591.1;Parent=gene-L8R42_001486;Dbxref=NCBI_GP:HBQ7389591.1;Name=HBQ7389591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=L8R42_001486;product=YaiI/YqxD family protein;protein_id=HBQ7389591.1;transl_table=11 DAFVNP010000018.1 tpg gene 54424 54969 . + . ID=gene-L8R42_001487;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=L8R42_001487 DAFVNP010000018.1 Protein Homology CDS 54424 54969 . + 0 ID=cds-HBQ7389592.1;Parent=gene-L8R42_001487;Dbxref=NCBI_GP:HBQ7389592.1;Name=HBQ7389592.1;gbkey=CDS;gene=aroL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=L8R42_001487;product=shikimate kinase AroL;protein_id=HBQ7389592.1;transl_table=11 DAFVNP010000018.1 tpg gene 54996 55187 . + . ID=gene-L8R42_001488;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=L8R42_001488 DAFVNP010000018.1 Protein Homology CDS 54996 55187 . + 0 ID=cds-HBQ7389593.1;Parent=gene-L8R42_001488;Dbxref=NCBI_GP:HBQ7389593.1;Name=HBQ7389593.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=L8R42_001488;product=protein YaiA;protein_id=HBQ7389593.1;transl_table=11 DAFVNP010000018.1 tpg gene 55438 56115 . + . ID=gene-L8R42_001489;Name=L8R42_001489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001489 DAFVNP010000018.1 Protein Homology CDS 55438 56115 . + 0 ID=cds-HBQ7389594.1;Parent=gene-L8R42_001489;Dbxref=NCBI_GP:HBQ7389594.1;Name=HBQ7389594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=L8R42_001489;product=AroM family protein;protein_id=HBQ7389594.1;transl_table=11 DAFVNP010000018.1 tpg gene 56186 56470 . + . ID=gene-L8R42_001490;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=L8R42_001490 DAFVNP010000018.1 Protein Homology CDS 56186 56470 . + 0 ID=cds-HBQ7389595.1;Parent=gene-L8R42_001490;Dbxref=NCBI_GP:HBQ7389595.1;Name=HBQ7389595.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=L8R42_001490;product=pyrimidine/purine nucleoside phosphorylase;protein_id=HBQ7389595.1;transl_table=11 DAFVNP010000018.1 tpg gene 56508 57419 . - . ID=gene-L8R42_001491;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=L8R42_001491 DAFVNP010000018.1 Protein Homology CDS 56508 57419 . - 0 ID=cds-HBQ7389596.1;Parent=gene-L8R42_001491;Dbxref=NCBI_GP:HBQ7389596.1;Name=HBQ7389596.1;gbkey=CDS;gene=rdgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=L8R42_001491;product=recombination-associated protein RdgC;protein_id=HBQ7389596.1;transl_table=11 DAFVNP010000018.1 tpg gene 57545 58453 . + . ID=gene-L8R42_001492;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=L8R42_001492 DAFVNP010000018.1 Protein Homology CDS 57545 58453 . + 0 ID=cds-HBQ7389597.1;Parent=gene-L8R42_001492;Dbxref=NCBI_GP:HBQ7389597.1;Name=HBQ7389597.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=L8R42_001492;product=fructokinase;protein_id=HBQ7389597.1;transl_table=11 DAFVNP010000018.1 tpg gene 58473 59645 . - . ID=gene-L8R42_001493;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=L8R42_001493 DAFVNP010000018.1 Protein Homology CDS 58473 59645 . - 0 ID=cds-HBQ7389598.1;Parent=gene-L8R42_001493;Dbxref=NCBI_GP:HBQ7389598.1;Name=HBQ7389598.1;gbkey=CDS;gene=araJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=L8R42_001493;product=MFS transporter AraJ;protein_id=HBQ7389598.1;transl_table=11 DAFVNP010000018.1 tpg gene 59818 62958 . - . ID=gene-L8R42_001494;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=L8R42_001494 DAFVNP010000018.1 Protein Homology CDS 59818 62958 . - 0 ID=cds-HBQ7389599.1;Parent=gene-L8R42_001494;Dbxref=NCBI_GP:HBQ7389599.1;Name=HBQ7389599.1;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=L8R42_001494;product=exonuclease subunit SbcC;protein_id=HBQ7389599.1;transl_table=11 DAFVNP010000018.1 tpg gene 62955 64157 . - . ID=gene-L8R42_001495;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=L8R42_001495 DAFVNP010000018.1 Protein Homology CDS 62955 64157 . - 0 ID=cds-HBQ7389600.1;Parent=gene-L8R42_001495;Dbxref=NCBI_GP:HBQ7389600.1;Name=HBQ7389600.1;gbkey=CDS;gene=sbcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=L8R42_001495;product=exonuclease subunit SbcD;protein_id=HBQ7389600.1;transl_table=11 ##sequence-region DAFVNP010000019.1 1 62969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000019.1 tpg region 1 62969 . + . ID=DAFVNP010000019.1:1..62969;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000019.1 tpg gene 1 920 . + . ID=gene-L8R42_001496;Name=L8R42_001496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001496;partial=true;start_range=.,1 DAFVNP010000019.1 Protein Homology CDS 1 920 . + 2 ID=cds-HBQ7389601.1;Parent=gene-L8R42_001496;Dbxref=NCBI_GP:HBQ7389601.1;Name=HBQ7389601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=L8R42_001496;partial=true;product=UxaA family hydrolase;protein_id=HBQ7389601.1;start_range=.,1;transl_table=11 DAFVNP010000019.1 tpg gene 1178 2032 . + . ID=gene-L8R42_001497;Name=L8R42_001497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001497 DAFVNP010000019.1 Protein Homology CDS 1178 2032 . + 0 ID=cds-HBQ7389602.1;Parent=gene-L8R42_001497;Dbxref=NCBI_GP:HBQ7389602.1;Name=HBQ7389602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=L8R42_001497;product=tagatose bisphosphate family class II aldolase;protein_id=HBQ7389602.1;transl_table=11 DAFVNP010000019.1 tpg gene 2152 3423 . + . ID=gene-L8R42_001498;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=L8R42_001498 DAFVNP010000019.1 Protein Homology CDS 2152 3423 . + 0 ID=cds-HBQ7389603.1;Parent=gene-L8R42_001498;Dbxref=NCBI_GP:HBQ7389603.1;Name=HBQ7389603.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=L8R42_001498;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=HBQ7389603.1;transl_table=11 DAFVNP010000019.1 tpg gene 3438 3902 . + . ID=gene-L8R42_001499;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=L8R42_001499 DAFVNP010000019.1 Protein Homology CDS 3438 3902 . + 0 ID=cds-HBQ7389604.1;Parent=gene-L8R42_001499;Dbxref=NCBI_GP:HBQ7389604.1;Name=HBQ7389604.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=L8R42_001499;product=PTS galactitol transporter subunit IIA;protein_id=HBQ7389604.1;transl_table=11 DAFVNP010000019.1 tpg gene 3933 4217 . + . ID=gene-L8R42_001500;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=L8R42_001500 DAFVNP010000019.1 Protein Homology CDS 3933 4217 . + 0 ID=cds-HBQ7389605.1;Parent=gene-L8R42_001500;Dbxref=NCBI_GP:HBQ7389605.1;Name=HBQ7389605.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=L8R42_001500;product=PTS galactitol transporter subunit IIB;protein_id=HBQ7389605.1;transl_table=11 DAFVNP010000019.1 tpg gene 4221 5594 . + . ID=gene-L8R42_001501;Name=L8R42_001501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001501 DAFVNP010000019.1 Protein Homology CDS 4221 5594 . + 0 ID=cds-HBQ7389606.1;Parent=gene-L8R42_001501;Dbxref=NCBI_GP:HBQ7389606.1;Name=HBQ7389606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=L8R42_001501;product=PTS galactitol transporter subunit IIC;protein_id=HBQ7389606.1;transl_table=11 DAFVNP010000019.1 tpg gene 5638 6681 . + . ID=gene-L8R42_001502;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=L8R42_001502 DAFVNP010000019.1 Protein Homology CDS 5638 6681 . + 0 ID=cds-HBQ7389607.1;Parent=gene-L8R42_001502;Dbxref=NCBI_GP:HBQ7389607.1;Name=HBQ7389607.1;gbkey=CDS;gene=gatD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=L8R42_001502;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=HBQ7389607.1;transl_table=11 DAFVNP010000019.1 tpg gene 6792 7565 . + . ID=gene-L8R42_001503;Name=L8R42_001503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001503 DAFVNP010000019.1 Protein Homology CDS 6792 7565 . + 0 ID=cds-HBQ7389608.1;Parent=gene-L8R42_001503;Dbxref=NCBI_GP:HBQ7389608.1;Name=HBQ7389608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=L8R42_001503;product=DeoR/GlpR transcriptional regulator;protein_id=HBQ7389608.1;transl_table=11 DAFVNP010000019.1 tpg gene 7723 8586 . - . ID=gene-L8R42_001504;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=L8R42_001504 DAFVNP010000019.1 Protein Homology CDS 7723 8586 . - 0 ID=cds-HBQ7389609.1;Parent=gene-L8R42_001504;Dbxref=NCBI_GP:HBQ7389609.1;Name=HBQ7389609.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=L8R42_001504;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=HBQ7389609.1;transl_table=11 DAFVNP010000019.1 tpg gene 8650 10692 . + . ID=gene-L8R42_001505;Name=L8R42_001505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001505 DAFVNP010000019.1 Protein Homology CDS 8650 10692 . + 0 ID=cds-HBQ7389610.1;Parent=gene-L8R42_001505;Dbxref=NCBI_GP:HBQ7389610.1;Name=HBQ7389610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=L8R42_001505;product=penicillin-binding protein activator;protein_id=HBQ7389610.1;transl_table=11 DAFVNP010000019.1 tpg gene 10650 11045 . + . ID=gene-L8R42_001506;Name=L8R42_001506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001506 DAFVNP010000019.1 Protein Homology CDS 10650 11045 . + 0 ID=cds-HBQ7389611.1;Parent=gene-L8R42_001506;Dbxref=NCBI_GP:HBQ7389611.1;Name=HBQ7389611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=L8R42_001506;product=YraN family protein;protein_id=HBQ7389611.1;transl_table=11 DAFVNP010000019.1 tpg gene 11067 11657 . + . ID=gene-L8R42_001507;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=L8R42_001507 DAFVNP010000019.1 Protein Homology CDS 11067 11657 . + 0 ID=cds-HBQ7389612.1;Parent=gene-L8R42_001507;Dbxref=NCBI_GP:HBQ7389612.1;Name=HBQ7389612.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=L8R42_001507;product=DnaA initiator-associating protein DiaA;protein_id=HBQ7389612.1;transl_table=11 DAFVNP010000019.1 tpg gene 11667 12242 . + . ID=gene-L8R42_001508;Name=yraP;gbkey=Gene;gene=yraP;gene_biotype=protein_coding;locus_tag=L8R42_001508 DAFVNP010000019.1 Protein Homology CDS 11667 12242 . + 0 ID=cds-HBQ7389613.1;Parent=gene-L8R42_001508;Dbxref=NCBI_GP:HBQ7389613.1;Name=HBQ7389613.1;gbkey=CDS;gene=yraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=L8R42_001508;product=divisome-associated lipoprotein YraP;protein_id=HBQ7389613.1;transl_table=11 DAFVNP010000019.1 tpg gene 12309 12944 . - . ID=gene-L8R42_001509;Name=L8R42_001509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001509 DAFVNP010000019.1 Protein Homology CDS 12309 12944 . - 0 ID=cds-HBQ7389614.1;Parent=gene-L8R42_001509;Dbxref=NCBI_GP:HBQ7389614.1;Name=HBQ7389614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=L8R42_001509;product=NAD(P)H-binding protein;protein_id=HBQ7389614.1;transl_table=11 DAFVNP010000019.1 tpg gene 13075 13593 . + . ID=gene-L8R42_001510;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=L8R42_001510 DAFVNP010000019.1 Protein Homology CDS 13075 13593 . + 0 ID=cds-HBQ7389615.1;Parent=gene-L8R42_001510;Dbxref=NCBI_GP:HBQ7389615.1;Name=HBQ7389615.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=L8R42_001510;product=protein/nucleic acid deglycase;protein_id=HBQ7389615.1;transl_table=11 DAFVNP010000019.1 tpg gene 13573 14016 . - . ID=gene-L8R42_001511;Name=L8R42_001511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001511 DAFVNP010000019.1 Protein Homology CDS 13573 14016 . - 0 ID=cds-HBQ7389616.1;Parent=gene-L8R42_001511;Dbxref=NCBI_GP:HBQ7389616.1;Name=HBQ7389616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=L8R42_001511;product=YhbP family protein;protein_id=HBQ7389616.1;transl_table=11 DAFVNP010000019.1 tpg gene 14054 14371 . + . ID=gene-L8R42_001512;Name=L8R42_001512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001512 DAFVNP010000019.1 Protein Homology CDS 14054 14371 . + 0 ID=cds-HBQ7389617.1;Parent=gene-L8R42_001512;Dbxref=NCBI_GP:HBQ7389617.1;Name=HBQ7389617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=L8R42_001512;product=GIY-YIG nuclease family protein;protein_id=HBQ7389617.1;transl_table=11 DAFVNP010000019.1 tpg gene 14358 14861 . - . ID=gene-L8R42_001513;Name=L8R42_001513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001513 DAFVNP010000019.1 Protein Homology CDS 14358 14861 . - 0 ID=cds-HBQ7389618.1;Parent=gene-L8R42_001513;Dbxref=NCBI_GP:HBQ7389618.1;Name=HBQ7389618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=L8R42_001513;product=N-acetyltransferase;protein_id=HBQ7389618.1;transl_table=11 DAFVNP010000019.1 tpg gene 14855 15379 . - . ID=gene-L8R42_001514;Name=L8R42_001514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001514 DAFVNP010000019.1 Protein Homology CDS 14855 15379 . - 0 ID=cds-HBQ7389619.1;Parent=gene-L8R42_001514;Dbxref=NCBI_GP:HBQ7389619.1;Name=HBQ7389619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=L8R42_001514;product=SCP2 domain-containing protein;protein_id=HBQ7389619.1;transl_table=11 DAFVNP010000019.1 tpg gene 15596 16591 . + . ID=gene-L8R42_001515;Name=L8R42_001515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001515 DAFVNP010000019.1 Protein Homology CDS 15596 16591 . + 0 ID=cds-HBQ7389620.1;Parent=gene-L8R42_001515;Dbxref=NCBI_GP:HBQ7389620.1;Name=HBQ7389620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=L8R42_001515;product=U32 family peptidase;protein_id=HBQ7389620.1;transl_table=11 DAFVNP010000019.1 tpg gene 16582 17478 . + . ID=gene-L8R42_001516;Name=L8R42_001516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001516 DAFVNP010000019.1 Protein Homology CDS 16582 17478 . + 0 ID=cds-HBQ7389621.1;Parent=gene-L8R42_001516;Dbxref=NCBI_GP:HBQ7389621.1;Name=HBQ7389621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462188.3;locus_tag=L8R42_001516;product=U32 family peptidase;protein_id=HBQ7389621.1;transl_table=11 DAFVNP010000019.1 tpg gene 17656 18663 . + . ID=gene-L8R42_001517;Name=L8R42_001517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001517 DAFVNP010000019.1 Protein Homology CDS 17656 18663 . + 0 ID=cds-HBQ7389622.1;Parent=gene-L8R42_001517;Dbxref=NCBI_GP:HBQ7389622.1;Name=HBQ7389622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=L8R42_001517;product=LLM class flavin-dependent oxidoreductase;protein_id=HBQ7389622.1;transl_table=11 DAFVNP010000019.1 tpg gene 18754 19998 . - . ID=gene-L8R42_001518;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=L8R42_001518 DAFVNP010000019.1 Protein Homology CDS 18754 19998 . - 0 ID=cds-HBQ7389623.1;Parent=gene-L8R42_001518;Dbxref=NCBI_GP:HBQ7389623.1;Name=HBQ7389623.1;gbkey=CDS;gene=mtr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=L8R42_001518;product=tryptophan permease;protein_id=HBQ7389623.1;transl_table=11 DAFVNP010000019.1 tpg gene 20152 22041 . - . ID=gene-L8R42_001519;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=L8R42_001519 DAFVNP010000019.1 Protein Homology CDS 20152 22041 . - 0 ID=cds-HBQ7389624.1;Parent=gene-L8R42_001519;Dbxref=NCBI_GP:HBQ7389624.1;Name=HBQ7389624.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=L8R42_001519;product=ATP-dependent RNA helicase DeaD;protein_id=HBQ7389624.1;transl_table=11 DAFVNP010000019.1 tpg gene 22034 22114 . - . ID=gene-L8R42_001520;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=L8R42_001520 DAFVNP010000019.1 Protein Homology CDS 22034 22114 . - 0 ID=cds-HBQ7389625.1;Parent=gene-L8R42_001520;Dbxref=NCBI_GP:HBQ7389625.1;Name=HBQ7389625.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=L8R42_001520;product=protein YrbN;protein_id=HBQ7389625.1;transl_table=11 DAFVNP010000019.1 tpg gene 22220 23104 . - . ID=gene-L8R42_001521;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=L8R42_001521 DAFVNP010000019.1 Protein Homology CDS 22220 23104 . - 0 ID=cds-HBQ7389626.1;Parent=gene-L8R42_001521;Dbxref=NCBI_GP:HBQ7389626.1;Name=HBQ7389626.1;gbkey=CDS;gene=nlpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=L8R42_001521;product=lipoprotein NlpI;protein_id=HBQ7389626.1;transl_table=11 DAFVNP010000019.1 tpg gene 23214 25349 . - . ID=gene-L8R42_001522;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=L8R42_001522 DAFVNP010000019.1 Protein Homology CDS 23214 25349 . - 0 ID=cds-HBQ7389627.1;Parent=gene-L8R42_001522;Dbxref=NCBI_GP:HBQ7389627.1;Name=HBQ7389627.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=L8R42_001522;product=polyribonucleotide nucleotidyltransferase;protein_id=HBQ7389627.1;transl_table=11 DAFVNP010000019.1 tpg gene 25591 25860 . - . ID=gene-L8R42_001523;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=L8R42_001523 DAFVNP010000019.1 Protein Homology CDS 25591 25860 . - 0 ID=cds-HBQ7389628.1;Parent=gene-L8R42_001523;Dbxref=NCBI_GP:HBQ7389628.1;Name=HBQ7389628.1;gbkey=CDS;gene=rpsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=L8R42_001523;product=30S ribosomal protein S15;protein_id=HBQ7389628.1;transl_table=11 DAFVNP010000019.1 tpg gene 26011 26955 . - . ID=gene-L8R42_001524;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=L8R42_001524 DAFVNP010000019.1 Protein Homology CDS 26011 26955 . - 0 ID=cds-HBQ7389629.1;Parent=gene-L8R42_001524;Dbxref=NCBI_GP:HBQ7389629.1;Name=HBQ7389629.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=L8R42_001524;product=tRNA pseudouridine(55) synthase TruB;protein_id=HBQ7389629.1;transl_table=11 DAFVNP010000019.1 tpg gene 26955 27356 . - . ID=gene-L8R42_001525;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=L8R42_001525 DAFVNP010000019.1 Protein Homology CDS 26955 27356 . - 0 ID=cds-HBQ7389630.1;Parent=gene-L8R42_001525;Dbxref=NCBI_GP:HBQ7389630.1;Name=HBQ7389630.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=L8R42_001525;product=30S ribosome-binding factor RbfA;protein_id=HBQ7389630.1;transl_table=11 DAFVNP010000019.1 tpg gene 27577 30255 . - . ID=gene-L8R42_001526;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=L8R42_001526 DAFVNP010000019.1 Protein Homology CDS 27577 30255 . - 0 ID=cds-HBQ7389631.1;Parent=gene-L8R42_001526;Dbxref=NCBI_GP:HBQ7389631.1;Name=HBQ7389631.1;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=L8R42_001526;product=translation initiation factor IF-2;protein_id=HBQ7389631.1;transl_table=11 DAFVNP010000019.1 tpg gene 30280 31782 . - . ID=gene-L8R42_001527;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=L8R42_001527 DAFVNP010000019.1 Protein Homology CDS 30280 31782 . - 0 ID=cds-HBQ7389632.1;Parent=gene-L8R42_001527;Dbxref=NCBI_GP:HBQ7389632.1;Name=HBQ7389632.1;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=L8R42_001527;product=transcription termination/antitermination protein NusA;protein_id=HBQ7389632.1;transl_table=11 DAFVNP010000019.1 tpg gene 31810 32262 . - . ID=gene-L8R42_001528;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=L8R42_001528 DAFVNP010000019.1 Protein Homology CDS 31810 32262 . - 0 ID=cds-HBQ7389633.1;Parent=gene-L8R42_001528;Dbxref=NCBI_GP:HBQ7389633.1;Name=HBQ7389633.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=L8R42_001528;product=ribosome maturation factor RimP;protein_id=HBQ7389633.1;transl_table=11 DAFVNP010000019.1 tpg gene 32470 32546 . - . ID=gene-L8R42_001529;Name=L8R42_001529;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001529 DAFVNP010000019.1 tRNAscan-SE tRNA 32470 32546 . - . ID=rna-L8R42_001529;Parent=gene-L8R42_001529;anticodon=(pos:complement(32510..32512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001529;product=tRNA-Met DAFVNP010000019.1 tRNAscan-SE exon 32470 32546 . - . ID=exon-L8R42_001529-1;Parent=rna-L8R42_001529;anticodon=(pos:complement(32510..32512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001529;product=tRNA-Met DAFVNP010000019.1 tpg gene 32890 34233 . + . ID=gene-L8R42_001530;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=L8R42_001530 DAFVNP010000019.1 Protein Homology CDS 32890 34233 . + 0 ID=cds-HBQ7389634.1;Parent=gene-L8R42_001530;Dbxref=NCBI_GP:HBQ7389634.1;Name=HBQ7389634.1;gbkey=CDS;gene=argG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=L8R42_001530;product=argininosuccinate synthase;protein_id=HBQ7389634.1;transl_table=11 DAFVNP010000019.1 tpg gene 34319 35383 . - . ID=gene-L8R42_001531;Name=L8R42_001531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001531 DAFVNP010000019.1 Protein Homology CDS 34319 35383 . - 0 ID=cds-HBQ7389635.1;Parent=gene-L8R42_001531;Dbxref=NCBI_GP:HBQ7389635.1;Name=HBQ7389635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462203.1;locus_tag=L8R42_001531;product=DUF1963 domain-containing protein;protein_id=HBQ7389635.1;transl_table=11 DAFVNP010000019.1 tpg gene 35719 35805 . - . ID=gene-L8R42_001532;Name=L8R42_001532;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001532 DAFVNP010000019.1 tRNAscan-SE tRNA 35719 35805 . - . ID=rna-L8R42_001532;Parent=gene-L8R42_001532;anticodon=(pos:complement(35769..35771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001532;product=tRNA-Leu DAFVNP010000019.1 tRNAscan-SE exon 35719 35805 . - . ID=exon-L8R42_001532-1;Parent=rna-L8R42_001532;anticodon=(pos:complement(35769..35771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001532;product=tRNA-Leu DAFVNP010000019.1 tpg gene 35819 36151 . - . ID=gene-L8R42_001533;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=L8R42_001533 DAFVNP010000019.1 Protein Homology CDS 35819 36151 . - 0 ID=cds-HBQ7389636.1;Parent=gene-L8R42_001533;Dbxref=NCBI_GP:HBQ7389636.1;Name=HBQ7389636.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=L8R42_001533;product=preprotein translocase subunit SecG;protein_id=HBQ7389636.1;transl_table=11 DAFVNP010000019.1 tpg gene 36366 37703 . - . ID=gene-L8R42_001534;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=L8R42_001534 DAFVNP010000019.1 Protein Homology CDS 36366 37703 . - 0 ID=cds-HBQ7389637.1;Parent=gene-L8R42_001534;Dbxref=NCBI_GP:HBQ7389637.1;Name=HBQ7389637.1;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=L8R42_001534;product=phosphoglucosamine mutase;protein_id=HBQ7389637.1;transl_table=11 DAFVNP010000019.1 tpg gene 37696 38544 . - . ID=gene-L8R42_001535;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=L8R42_001535 DAFVNP010000019.1 Protein Homology CDS 37696 38544 . - 0 ID=cds-HBQ7389638.1;Parent=gene-L8R42_001535;Dbxref=NCBI_GP:HBQ7389638.1;Name=HBQ7389638.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=L8R42_001535;product=dihydropteroate synthase;protein_id=HBQ7389638.1;transl_table=11 DAFVNP010000019.1 tpg gene 38649 40583 . - . ID=gene-L8R42_001536;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=L8R42_001536 DAFVNP010000019.1 Protein Homology CDS 38649 40583 . - 0 ID=cds-HBQ7389639.1;Parent=gene-L8R42_001536;Dbxref=NCBI_GP:HBQ7389639.1;Name=HBQ7389639.1;gbkey=CDS;gene=ftsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=L8R42_001536;product=ATP-dependent zinc metalloprotease FtsH;protein_id=HBQ7389639.1;transl_table=11 DAFVNP010000019.1 tpg gene 40687 41313 . - . ID=gene-L8R42_001537;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=L8R42_001537 DAFVNP010000019.1 Protein Homology CDS 40687 41313 . - 0 ID=cds-HBQ7389640.1;Parent=gene-L8R42_001537;Dbxref=NCBI_GP:HBQ7389640.1;Name=HBQ7389640.1;gbkey=CDS;gene=rlmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=L8R42_001537;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=HBQ7389640.1;transl_table=11 DAFVNP010000019.1 tpg gene 41440 41733 . + . ID=gene-L8R42_001538;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=L8R42_001538 DAFVNP010000019.1 Protein Homology CDS 41440 41733 . + 0 ID=cds-HBQ7389641.1;Parent=gene-L8R42_001538;Dbxref=NCBI_GP:HBQ7389641.1;Name=HBQ7389641.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=L8R42_001538;product=ribosome assembly RNA-binding protein YhbY;protein_id=HBQ7389641.1;transl_table=11 DAFVNP010000019.1 tpg gene 41889 42365 . - . ID=gene-L8R42_001539;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=L8R42_001539 DAFVNP010000019.1 Protein Homology CDS 41889 42365 . - 0 ID=cds-HBQ7389642.1;Parent=gene-L8R42_001539;Dbxref=NCBI_GP:HBQ7389642.1;Name=HBQ7389642.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=L8R42_001539;product=transcription elongation factor GreA;protein_id=HBQ7389642.1;transl_table=11 DAFVNP010000019.1 tpg gene 42613 44046 . + . ID=gene-L8R42_001540;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=L8R42_001540 DAFVNP010000019.1 Protein Homology CDS 42613 44046 . + 0 ID=cds-HBQ7389643.1;Parent=gene-L8R42_001540;Dbxref=NCBI_GP:HBQ7389643.1;Name=HBQ7389643.1;gbkey=CDS;gene=dacB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=L8R42_001540;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=HBQ7389643.1;transl_table=11 DAFVNP010000019.1 tpg gene 44177 45349 . - . ID=gene-L8R42_001541;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=L8R42_001541 DAFVNP010000019.1 Protein Homology CDS 44177 45349 . - 0 ID=cds-HBQ7389644.1;Parent=gene-L8R42_001541;Dbxref=NCBI_GP:HBQ7389644.1;Name=HBQ7389644.1;gbkey=CDS;gene=cgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=L8R42_001541;product=Obg family GTPase CgtA;protein_id=HBQ7389644.1;transl_table=11 DAFVNP010000019.1 tpg gene 45365 46330 . - . ID=gene-L8R42_001542;Name=L8R42_001542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001542 DAFVNP010000019.1 Protein Homology CDS 45365 46330 . - 0 ID=cds-HBQ7389645.1;Parent=gene-L8R42_001542;Dbxref=NCBI_GP:HBQ7389645.1;Name=HBQ7389645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=L8R42_001542;product=DMT family transporter;protein_id=HBQ7389645.1;transl_table=11 DAFVNP010000019.1 tpg gene 46460 46717 . - . ID=gene-L8R42_001543;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=L8R42_001543 DAFVNP010000019.1 Protein Homology CDS 46460 46717 . - 0 ID=cds-HBQ7389646.1;Parent=gene-L8R42_001543;Dbxref=NCBI_GP:HBQ7389646.1;Name=HBQ7389646.1;gbkey=CDS;gene=rpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=L8R42_001543;product=50S ribosomal protein L27;protein_id=HBQ7389646.1;transl_table=11 DAFVNP010000019.1 tpg gene 46737 47048 . - . ID=gene-L8R42_001544;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=L8R42_001544 DAFVNP010000019.1 Protein Homology CDS 46737 47048 . - 0 ID=cds-HBQ7389647.1;Parent=gene-L8R42_001544;Dbxref=NCBI_GP:HBQ7389647.1;Name=HBQ7389647.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=L8R42_001544;product=50S ribosomal protein L21;protein_id=HBQ7389647.1;transl_table=11 DAFVNP010000019.1 tpg gene 47306 48277 . + . ID=gene-L8R42_001545;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=L8R42_001545 DAFVNP010000019.1 Protein Homology CDS 47306 48277 . + 0 ID=cds-HBQ7389648.1;Parent=gene-L8R42_001545;Dbxref=NCBI_GP:HBQ7389648.1;Name=HBQ7389648.1;gbkey=CDS;gene=ispB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=L8R42_001545;product=octaprenyl diphosphate synthase;protein_id=HBQ7389648.1;transl_table=11 DAFVNP010000019.1 tpg gene 48509 48796 . + . ID=gene-L8R42_001546;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=L8R42_001546 DAFVNP010000019.1 Protein Homology CDS 48509 48796 . + 0 ID=cds-HBQ7389649.1;Parent=gene-L8R42_001546;Dbxref=NCBI_GP:HBQ7389649.1;Name=HBQ7389649.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=L8R42_001546;product=DNA-binding transcriptional regulator SfsB;protein_id=HBQ7389649.1;transl_table=11 DAFVNP010000019.1 tpg gene 48854 50113 . - . ID=gene-L8R42_001547;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=L8R42_001547 DAFVNP010000019.1 Protein Homology CDS 48854 50113 . - 0 ID=cds-HBQ7389650.1;Parent=gene-L8R42_001547;Dbxref=NCBI_GP:HBQ7389650.1;Name=HBQ7389650.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868122.1;locus_tag=L8R42_001547;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=HBQ7389650.1;transl_table=11 DAFVNP010000019.1 tpg gene 50167 50421 . - . ID=gene-L8R42_001548;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=L8R42_001548 DAFVNP010000019.1 Protein Homology CDS 50167 50421 . - 0 ID=cds-HBQ7389651.1;Parent=gene-L8R42_001548;Dbxref=NCBI_GP:HBQ7389651.1;Name=HBQ7389651.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=L8R42_001548;product=BolA family iron metabolism protein IbaG;protein_id=HBQ7389651.1;transl_table=11 DAFVNP010000019.1 tpg gene 50609 50905 . - . ID=gene-L8R42_001549;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=L8R42_001549 DAFVNP010000019.1 Protein Homology CDS 50609 50905 . - 0 ID=cds-HBQ7389652.1;Parent=gene-L8R42_001549;Dbxref=NCBI_GP:HBQ7389652.1;Name=HBQ7389652.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=L8R42_001549;product=lipid asymmetry maintenance protein MlaB;protein_id=HBQ7389652.1;transl_table=11 DAFVNP010000019.1 tpg gene 50905 51540 . - . ID=gene-L8R42_001550;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=L8R42_001550 DAFVNP010000019.1 Protein Homology CDS 50905 51540 . - 0 ID=cds-HBQ7389653.1;Parent=gene-L8R42_001550;Dbxref=NCBI_GP:HBQ7389653.1;Name=HBQ7389653.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=L8R42_001550;product=phospholipid-binding protein MlaC;protein_id=HBQ7389653.1;transl_table=11 DAFVNP010000019.1 tpg gene 51559 52110 . - . ID=gene-L8R42_001551;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=L8R42_001551 DAFVNP010000019.1 Protein Homology CDS 51559 52110 . - 0 ID=cds-HBQ7389654.1;Parent=gene-L8R42_001551;Dbxref=NCBI_GP:HBQ7389654.1;Name=HBQ7389654.1;gbkey=CDS;gene=mlaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=L8R42_001551;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=HBQ7389654.1;transl_table=11 DAFVNP010000019.1 tpg gene 52115 52897 . - . ID=gene-L8R42_001552;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=L8R42_001552 DAFVNP010000019.1 Protein Homology CDS 52115 52897 . - 0 ID=cds-HBQ7389655.1;Parent=gene-L8R42_001552;Dbxref=NCBI_GP:HBQ7389655.1;Name=HBQ7389655.1;gbkey=CDS;gene=mlaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=L8R42_001552;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=HBQ7389655.1;transl_table=11 DAFVNP010000019.1 tpg gene 52905 53717 . - . ID=gene-L8R42_001553;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=L8R42_001553 DAFVNP010000019.1 Protein Homology CDS 52905 53717 . - 0 ID=cds-HBQ7389656.1;Parent=gene-L8R42_001553;Dbxref=NCBI_GP:HBQ7389656.1;Name=HBQ7389656.1;gbkey=CDS;gene=mlaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=L8R42_001553;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=HBQ7389656.1;transl_table=11 DAFVNP010000019.1 tpg gene 53930 54907 . + . ID=gene-L8R42_001554;Name=L8R42_001554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001554 DAFVNP010000019.1 Protein Homology CDS 53930 54907 . + 0 ID=cds-HBQ7389657.1;Parent=gene-L8R42_001554;Dbxref=NCBI_GP:HBQ7389657.1;Name=HBQ7389657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=L8R42_001554;product=calcium/sodium antiporter;protein_id=HBQ7389657.1;transl_table=11 DAFVNP010000019.1 tpg gene 54921 55907 . + . ID=gene-L8R42_001555;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=L8R42_001555 DAFVNP010000019.1 Protein Homology CDS 54921 55907 . + 0 ID=cds-HBQ7389658.1;Parent=gene-L8R42_001555;Dbxref=NCBI_GP:HBQ7389658.1;Name=HBQ7389658.1;gbkey=CDS;gene=kdsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=L8R42_001555;product=arabinose-5-phosphate isomerase KdsD;protein_id=HBQ7389658.1;transl_table=11 DAFVNP010000019.1 tpg gene 55928 56494 . + . ID=gene-L8R42_001556;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=L8R42_001556 DAFVNP010000019.1 Protein Homology CDS 55928 56494 . + 0 ID=cds-HBQ7389659.1;Parent=gene-L8R42_001556;Dbxref=NCBI_GP:HBQ7389659.1;Name=HBQ7389659.1;gbkey=CDS;gene=kdsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=L8R42_001556;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=HBQ7389659.1;transl_table=11 DAFVNP010000019.1 tpg gene 56491 57066 . + . ID=gene-L8R42_001557;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=L8R42_001557 DAFVNP010000019.1 Protein Homology CDS 56491 57066 . + 0 ID=cds-HBQ7389660.1;Parent=gene-L8R42_001557;Dbxref=NCBI_GP:HBQ7389660.1;Name=HBQ7389660.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=L8R42_001557;product=LPS export ABC transporter periplasmic protein LptC;protein_id=HBQ7389660.1;transl_table=11 DAFVNP010000019.1 tpg gene 57035 57589 . + . ID=gene-L8R42_001558;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=L8R42_001558 DAFVNP010000019.1 Protein Homology CDS 57035 57589 . + 0 ID=cds-HBQ7389661.1;Parent=gene-L8R42_001558;Dbxref=NCBI_GP:HBQ7389661.1;Name=HBQ7389661.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=L8R42_001558;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=HBQ7389661.1;transl_table=11 DAFVNP010000019.1 tpg gene 57596 58321 . + . ID=gene-L8R42_001559;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=L8R42_001559 DAFVNP010000019.1 Protein Homology CDS 57596 58321 . + 0 ID=cds-HBQ7389662.1;Parent=gene-L8R42_001559;Dbxref=NCBI_GP:HBQ7389662.1;Name=HBQ7389662.1;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=L8R42_001559;product=LPS export ABC transporter ATP-binding protein;protein_id=HBQ7389662.1;transl_table=11 DAFVNP010000019.1 tpg gene 58369 59802 . + . ID=gene-L8R42_001560;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=L8R42_001560 DAFVNP010000019.1 Protein Homology CDS 58369 59802 . + 0 ID=cds-HBQ7389663.1;Parent=gene-L8R42_001560;Dbxref=NCBI_GP:HBQ7389663.1;Name=HBQ7389663.1;gbkey=CDS;gene=rpoN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=L8R42_001560;product=RNA polymerase factor sigma-54;protein_id=HBQ7389663.1;transl_table=11 DAFVNP010000019.1 tpg gene 59825 60112 . + . ID=gene-L8R42_001561;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=L8R42_001561 DAFVNP010000019.1 Protein Homology CDS 59825 60112 . + 0 ID=cds-HBQ7389664.1;Parent=gene-L8R42_001561;Dbxref=NCBI_GP:HBQ7389664.1;Name=HBQ7389664.1;gbkey=CDS;gene=hpf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=L8R42_001561;product=ribosome hibernation promoting factor;protein_id=HBQ7389664.1;transl_table=11 DAFVNP010000019.1 tpg gene 60230 60721 . + . ID=gene-L8R42_001562;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=L8R42_001562 DAFVNP010000019.1 Protein Homology CDS 60230 60721 . + 0 ID=cds-HBQ7389665.1;Parent=gene-L8R42_001562;Dbxref=NCBI_GP:HBQ7389665.1;Name=HBQ7389665.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=L8R42_001562;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=HBQ7389665.1;transl_table=11 DAFVNP010000019.1 tpg gene 60767 61621 . + . ID=gene-L8R42_001563;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=L8R42_001563 DAFVNP010000019.1 Protein Homology CDS 60767 61621 . + 0 ID=cds-HBQ7389666.1;Parent=gene-L8R42_001563;Dbxref=NCBI_GP:HBQ7389666.1;Name=HBQ7389666.1;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=L8R42_001563;product=RNase adapter RapZ;protein_id=HBQ7389666.1;transl_table=11 DAFVNP010000019.1 tpg gene 61618 61890 . + . ID=gene-L8R42_001564;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=L8R42_001564 DAFVNP010000019.1 Protein Homology CDS 61618 61890 . + 0 ID=cds-HBQ7389667.1;Parent=gene-L8R42_001564;Dbxref=NCBI_GP:HBQ7389667.1;Name=HBQ7389667.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=L8R42_001564;product=PTS phosphocarrier protein NPr;protein_id=HBQ7389667.1;transl_table=11 DAFVNP010000019.1 tpg gene 62137 62769 . + . ID=gene-L8R42_001565;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=L8R42_001565 DAFVNP010000019.1 Protein Homology CDS 62137 62769 . + 0 ID=cds-HBQ7389668.1;Parent=gene-L8R42_001565;Dbxref=NCBI_GP:HBQ7389668.1;Name=HBQ7389668.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=L8R42_001565;product=PhoP regulatory network protein YrbL;protein_id=HBQ7389668.1;transl_table=11 DAFVNP010000019.1 tpg gene 62844 62969 . - . ID=gene-L8R42_001566;Name=L8R42_001566;end_range=62969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001566;partial=true DAFVNP010000019.1 Protein Homology CDS 62844 62969 . - 0 ID=cds-HBQ7389669.1;Parent=gene-L8R42_001566;Dbxref=NCBI_GP:HBQ7389669.1;Name=HBQ7389669.1;end_range=62969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=L8R42_001566;partial=true;product=peptidoglycan transglycosylase;protein_id=HBQ7389669.1;transl_table=11 ##sequence-region DAFVNP010000020.1 1 59852 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000020.1 tpg region 1 59852 . + . ID=DAFVNP010000020.1:1..59852;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000020.1 tpg gene 61 1500 . + . ID=gene-L8R42_001567;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=L8R42_001567 DAFVNP010000020.1 Protein Homology CDS 61 1500 . + 0 ID=cds-HBQ7389670.1;Parent=gene-L8R42_001567;Dbxref=NCBI_GP:HBQ7389670.1;Name=HBQ7389670.1;gbkey=CDS;gene=norV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=L8R42_001567;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=HBQ7389670.1;transl_table=11 DAFVNP010000020.1 tpg gene 1497 2630 . + . ID=gene-L8R42_001568;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=L8R42_001568 DAFVNP010000020.1 Protein Homology CDS 1497 2630 . + 0 ID=cds-HBQ7389671.1;Parent=gene-L8R42_001568;Dbxref=NCBI_GP:HBQ7389671.1;Name=HBQ7389671.1;gbkey=CDS;gene=norW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=L8R42_001568;product=NADH:flavorubredoxin reductase NorW;protein_id=HBQ7389671.1;transl_table=11 DAFVNP010000020.1 tpg gene 2727 4967 . - . ID=gene-L8R42_001569;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=L8R42_001569 DAFVNP010000020.1 Protein Homology CDS 2727 4967 . - 0 ID=cds-HBQ7389672.1;Parent=gene-L8R42_001569;Dbxref=NCBI_GP:HBQ7389672.1;Name=HBQ7389672.1;gbkey=CDS;gene=hypF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=L8R42_001569;product=carbamoyltransferase HypF;protein_id=HBQ7389672.1;transl_table=11 DAFVNP010000020.1 tpg gene 5113 5658 . - . ID=gene-L8R42_001570;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=L8R42_001570 DAFVNP010000020.1 Protein Homology CDS 5113 5658 . - 0 ID=cds-HBQ7389673.1;Parent=gene-L8R42_001570;Dbxref=NCBI_GP:HBQ7389673.1;Name=HBQ7389673.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=L8R42_001570;product=electron transport protein HydN;protein_id=HBQ7389673.1;transl_table=11 DAFVNP010000020.1 tpg gene 5859 6668 . - . ID=gene-L8R42_001571;Name=L8R42_001571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001571 DAFVNP010000020.1 Protein Homology CDS 5859 6668 . - 0 ID=cds-HBQ7389674.1;Parent=gene-L8R42_001571;Dbxref=NCBI_GP:HBQ7389674.1;Name=HBQ7389674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=L8R42_001571;product=hypothetical protein;protein_id=HBQ7389674.1;transl_table=11 DAFVNP010000020.1 tpg gene 6695 7165 . - . ID=gene-L8R42_001572;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=L8R42_001572 DAFVNP010000020.1 Protein Homology CDS 6695 7165 . - 0 ID=cds-HBQ7389675.1;Parent=gene-L8R42_001572;Dbxref=NCBI_GP:HBQ7389675.1;Name=HBQ7389675.1;gbkey=CDS;gene=hycI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=L8R42_001572;product=hydrogenase maturation peptidase HycI;protein_id=HBQ7389675.1;transl_table=11 DAFVNP010000020.1 tpg gene 7158 7568 . - . ID=gene-L8R42_001573;Name=L8R42_001573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001573 DAFVNP010000020.1 Protein Homology CDS 7158 7568 . - 0 ID=cds-HBQ7389676.1;Parent=gene-L8R42_001573;Dbxref=NCBI_GP:HBQ7389676.1;Name=HBQ7389676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=L8R42_001573;product=formate hydrogenlyase maturation HycH family protein;protein_id=HBQ7389676.1;transl_table=11 DAFVNP010000020.1 tpg gene 7565 8332 . - . ID=gene-L8R42_001574;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=L8R42_001574 DAFVNP010000020.1 Protein Homology CDS 7565 8332 . - 0 ID=cds-HBQ7389677.1;Parent=gene-L8R42_001574;Dbxref=NCBI_GP:HBQ7389677.1;Name=HBQ7389677.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=L8R42_001574;product=formate hydrogenlyase subunit HycG;protein_id=HBQ7389677.1;transl_table=11 DAFVNP010000020.1 tpg gene 8332 8874 . - . ID=gene-L8R42_001575;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=L8R42_001575 DAFVNP010000020.1 Protein Homology CDS 8332 8874 . - 0 ID=cds-HBQ7389678.1;Parent=gene-L8R42_001575;Dbxref=NCBI_GP:HBQ7389678.1;Name=HBQ7389678.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=L8R42_001575;product=formate hydrogenlyase subunit HycF;protein_id=HBQ7389678.1;transl_table=11 DAFVNP010000020.1 tpg gene 8884 10593 . - . ID=gene-L8R42_001576;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=L8R42_001576 DAFVNP010000020.1 Protein Homology CDS 8884 10593 . - 0 ID=cds-HBQ7389679.1;Parent=gene-L8R42_001576;Dbxref=NCBI_GP:HBQ7389679.1;Name=HBQ7389679.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=L8R42_001576;product=formate hydrogenlyase subunit HycE;protein_id=HBQ7389679.1;transl_table=11 DAFVNP010000020.1 tpg gene 10611 11534 . - . ID=gene-L8R42_001577;Name=L8R42_001577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001577 DAFVNP010000020.1 Protein Homology CDS 10611 11534 . - 0 ID=cds-HBQ7389680.1;Parent=gene-L8R42_001577;Dbxref=NCBI_GP:HBQ7389680.1;Name=HBQ7389680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=L8R42_001577;product=respiratory chain complex I subunit 1 family protein;protein_id=HBQ7389680.1;transl_table=11 DAFVNP010000020.1 tpg gene 11537 13363 . - . ID=gene-L8R42_001578;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=L8R42_001578 DAFVNP010000020.1 Protein Homology CDS 11537 13363 . - 0 ID=cds-HBQ7389681.1;Parent=gene-L8R42_001578;Dbxref=NCBI_GP:HBQ7389681.1;Name=HBQ7389681.1;gbkey=CDS;gene=hycC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=L8R42_001578;product=formate hydrogenlyase subunit 3;protein_id=HBQ7389681.1;transl_table=11 DAFVNP010000020.1 tpg gene 13363 13971 . - . ID=gene-L8R42_001579;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=L8R42_001579 DAFVNP010000020.1 Protein Homology CDS 13363 13971 . - 0 ID=cds-HBQ7389682.1;Parent=gene-L8R42_001579;Dbxref=NCBI_GP:HBQ7389682.1;Name=HBQ7389682.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=L8R42_001579;product=formate hydrogenlyase subunit HycB;protein_id=HBQ7389682.1;transl_table=11 DAFVNP010000020.1 tpg gene 14117 14578 . - . ID=gene-L8R42_001580;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=L8R42_001580 DAFVNP010000020.1 Protein Homology CDS 14117 14578 . - 0 ID=cds-HBQ7389683.1;Parent=gene-L8R42_001580;Dbxref=NCBI_GP:HBQ7389683.1;Name=HBQ7389683.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=L8R42_001580;product=formate hydrogenlyase regulator HycA;protein_id=HBQ7389683.1;transl_table=11 DAFVNP010000020.1 tpg gene 14788 15144 . + . ID=gene-L8R42_001581;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=L8R42_001581 DAFVNP010000020.1 Protein Homology CDS 14788 15144 . + 0 ID=cds-HBQ7389684.1;Parent=gene-L8R42_001581;Dbxref=NCBI_GP:HBQ7389684.1;Name=HBQ7389684.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=L8R42_001581;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HBQ7389684.1;transl_table=11 DAFVNP010000020.1 tpg gene 15213 16085 . + . ID=gene-L8R42_001582;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=L8R42_001582 DAFVNP010000020.1 Protein Homology CDS 15213 16085 . + 0 ID=cds-HBQ7389685.1;Parent=gene-L8R42_001582;Dbxref=NCBI_GP:HBQ7389685.1;Name=HBQ7389685.1;gbkey=CDS;gene=hypB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=L8R42_001582;product=hydrogenase nickel incorporation protein HypB;protein_id=HBQ7389685.1;transl_table=11 DAFVNP010000020.1 tpg gene 16076 16348 . + . ID=gene-L8R42_001583;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=L8R42_001583 DAFVNP010000020.1 Protein Homology CDS 16076 16348 . + 0 ID=cds-HBQ7389686.1;Parent=gene-L8R42_001583;Dbxref=NCBI_GP:HBQ7389686.1;Name=HBQ7389686.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=L8R42_001583;product=hydrogenase 3 maturation protein HypC;protein_id=HBQ7389686.1;transl_table=11 DAFVNP010000020.1 tpg gene 16348 17469 . + . ID=gene-L8R42_001584;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=L8R42_001584 DAFVNP010000020.1 Protein Homology CDS 16348 17469 . + 0 ID=cds-HBQ7389687.1;Parent=gene-L8R42_001584;Dbxref=NCBI_GP:HBQ7389687.1;Name=HBQ7389687.1;gbkey=CDS;gene=hypD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=L8R42_001584;product=hydrogenase formation protein HypD;protein_id=HBQ7389687.1;transl_table=11 DAFVNP010000020.1 tpg gene 17466 18476 . + . ID=gene-L8R42_001585;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=L8R42_001585 DAFVNP010000020.1 Protein Homology CDS 17466 18476 . + 0 ID=cds-HBQ7389688.1;Parent=gene-L8R42_001585;Dbxref=NCBI_GP:HBQ7389688.1;Name=HBQ7389688.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=L8R42_001585;product=hydrogenase expression/formation protein HypE;protein_id=HBQ7389688.1;transl_table=11 DAFVNP010000020.1 tpg gene 18695 20773 . + . ID=gene-L8R42_001586;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=L8R42_001586 DAFVNP010000020.1 Protein Homology CDS 18695 20773 . + 0 ID=cds-HBQ7389689.1;Parent=gene-L8R42_001586;Dbxref=NCBI_GP:HBQ7389689.1;Name=HBQ7389689.1;gbkey=CDS;gene=flhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=L8R42_001586;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=HBQ7389689.1;transl_table=11 DAFVNP010000020.1 tpg gene 20835 21179 . - . ID=gene-L8R42_001587;Name=L8R42_001587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001587 DAFVNP010000020.1 Protein Homology CDS 20835 21179 . - 0 ID=cds-HBQ7389690.1;Parent=gene-L8R42_001587;Dbxref=NCBI_GP:HBQ7389690.1;Name=HBQ7389690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=L8R42_001587;product=nitrous oxide-stimulated promoter family protein;protein_id=HBQ7389690.1;transl_table=11 DAFVNP010000020.1 tpg gene 21361 22278 . + . ID=gene-L8R42_001588;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=L8R42_001588 DAFVNP010000020.1 Protein Homology CDS 21361 22278 . + 0 ID=cds-HBQ7389691.1;Parent=gene-L8R42_001588;Dbxref=NCBI_GP:HBQ7389691.1;Name=HBQ7389691.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=L8R42_001588;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=HBQ7389691.1;transl_table=11 DAFVNP010000020.1 tpg gene 22275 23096 . + . ID=gene-L8R42_001589;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=L8R42_001589 DAFVNP010000020.1 Protein Homology CDS 22275 23096 . + 0 ID=cds-HBQ7389692.1;Parent=gene-L8R42_001589;Dbxref=NCBI_GP:HBQ7389692.1;Name=HBQ7389692.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=L8R42_001589;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=HBQ7389692.1;transl_table=11 DAFVNP010000020.1 tpg gene 23093 23953 . + . ID=gene-L8R42_001590;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=L8R42_001590 DAFVNP010000020.1 Protein Homology CDS 23093 23953 . + 0 ID=cds-HBQ7389693.1;Parent=gene-L8R42_001590;Dbxref=NCBI_GP:HBQ7389693.1;Name=HBQ7389693.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=L8R42_001590;product=iron/manganese ABC transporter permease subunit SitC;protein_id=HBQ7389693.1;transl_table=11 DAFVNP010000020.1 tpg gene 23944 24792 . + . ID=gene-L8R42_001591;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=L8R42_001591 DAFVNP010000020.1 Protein Homology CDS 23944 24792 . + 0 ID=cds-HBQ7389694.1;Parent=gene-L8R42_001591;Dbxref=NCBI_GP:HBQ7389694.1;Name=HBQ7389694.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=L8R42_001591;product=iron/manganese ABC transporter permease subunit SitD;protein_id=HBQ7389694.1;transl_table=11 DAFVNP010000020.1 tpg gene 24891 25799 . - . ID=gene-L8R42_001592;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=L8R42_001592 DAFVNP010000020.1 Protein Homology CDS 24891 25799 . - 0 ID=cds-HBQ7389695.1;Parent=gene-L8R42_001592;Dbxref=NCBI_GP:HBQ7389695.1;Name=HBQ7389695.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=L8R42_001592;product=type III secretion system YopJ family effector AvrA;protein_id=HBQ7389695.1;transl_table=11 DAFVNP010000020.1 tpg gene 25960 26715 . - . ID=gene-L8R42_001593;Name=L8R42_001593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001593 DAFVNP010000020.1 Protein Homology CDS 25960 26715 . - 0 ID=cds-HBQ7389696.1;Parent=gene-L8R42_001593;Dbxref=NCBI_GP:HBQ7389696.1;Name=HBQ7389696.1;Note=activates Salmonella pathogenicity island 4 genes and weakly represses Salmonella pathogenicity island 1 genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=L8R42_001593;product=transcriptional regulator;protein_id=HBQ7389696.1;transl_table=11 DAFVNP010000020.1 tpg gene 27100 27987 . - . ID=gene-L8R42_001594;Name=sirC;gbkey=Gene;gene=sirC;gene_biotype=protein_coding;locus_tag=L8R42_001594 DAFVNP010000020.1 Protein Homology CDS 27100 27987 . - 0 ID=cds-HBQ7389697.1;Parent=gene-L8R42_001594;Dbxref=NCBI_GP:HBQ7389697.1;Name=HBQ7389697.1;gbkey=CDS;gene=sirC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=L8R42_001594;product=transcriptional regulator SirC;protein_id=HBQ7389697.1;transl_table=11 DAFVNP010000020.1 tpg gene 28333 28785 . - . ID=gene-L8R42_001595;Name=L8R42_001595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001595 DAFVNP010000020.1 Protein Homology CDS 28333 28785 . - 0 ID=cds-HBQ7389698.1;Parent=gene-L8R42_001595;Dbxref=NCBI_GP:HBQ7389698.1;Name=HBQ7389698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=L8R42_001595;product=type III secretion system effector protein OrgC;protein_id=HBQ7389698.1;transl_table=11 DAFVNP010000020.1 tpg gene 28801 29472 . - . ID=gene-L8R42_001596;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=L8R42_001596 DAFVNP010000020.1 Protein Homology CDS 28801 29472 . - 0 ID=cds-HBQ7389699.1;Parent=gene-L8R42_001596;Dbxref=NCBI_GP:HBQ7389699.1;Name=HBQ7389699.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835247.1;locus_tag=L8R42_001596;product=type III secretion system linker protein OrgB;protein_id=HBQ7389699.1;transl_table=11 DAFVNP010000020.1 tpg gene 29429 30028 . - . ID=gene-L8R42_001597;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=L8R42_001597 DAFVNP010000020.1 Protein Homology CDS 29429 30028 . - 0 ID=cds-HBQ7389700.1;Parent=gene-L8R42_001597;Dbxref=NCBI_GP:HBQ7389700.1;Name=HBQ7389700.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=L8R42_001597;product=oxygen-regulated invasion protein OrgA;protein_id=HBQ7389700.1;transl_table=11 DAFVNP010000020.1 tpg gene 30000 30758 . - . ID=gene-L8R42_001598;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=L8R42_001598 DAFVNP010000020.1 Protein Homology CDS 30000 30758 . - 0 ID=cds-HBQ7389701.1;Parent=gene-L8R42_001598;Dbxref=NCBI_GP:HBQ7389701.1;Name=HBQ7389701.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=L8R42_001598;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=HBQ7389701.1;transl_table=11 DAFVNP010000020.1 tpg gene 30755 31060 . - . ID=gene-L8R42_001599;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=L8R42_001599 DAFVNP010000020.1 Protein Homology CDS 30755 31060 . - 0 ID=cds-HBQ7389702.1;Parent=gene-L8R42_001599;Dbxref=NCBI_GP:HBQ7389702.1;Name=HBQ7389702.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=L8R42_001599;product=type III secretion system inner rod protein PrgJ;protein_id=HBQ7389702.1;transl_table=11 DAFVNP010000020.1 tpg gene 31079 31321 . - . ID=gene-L8R42_001600;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=L8R42_001600 DAFVNP010000020.1 Protein Homology CDS 31079 31321 . - 0 ID=cds-HBQ7389703.1;Parent=gene-L8R42_001600;Dbxref=NCBI_GP:HBQ7389703.1;Name=HBQ7389703.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=L8R42_001600;product=type III secretion system needle filament protein PrgI;protein_id=HBQ7389703.1;transl_table=11 DAFVNP010000020.1 tpg gene 31346 32524 . - . ID=gene-L8R42_001601;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=L8R42_001601 DAFVNP010000020.1 Protein Homology CDS 31346 32524 . - 0 ID=cds-HBQ7389704.1;Parent=gene-L8R42_001601;Dbxref=NCBI_GP:HBQ7389704.1;Name=HBQ7389704.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=L8R42_001601;product=type III secretion system inner membrane ring protein PrgH;protein_id=HBQ7389704.1;transl_table=11 DAFVNP010000020.1 tpg gene 32840 33769 . + . ID=gene-L8R42_001602;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=L8R42_001602 DAFVNP010000020.1 Protein Homology CDS 32840 33769 . + 0 ID=cds-HBQ7389705.1;Parent=gene-L8R42_001602;Dbxref=NCBI_GP:HBQ7389705.1;Name=HBQ7389705.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=L8R42_001602;product=transcriptional regulator HilD;protein_id=HBQ7389705.1;transl_table=11 DAFVNP010000020.1 tpg gene 34859 36520 . + . ID=gene-L8R42_001603;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=L8R42_001603 DAFVNP010000020.1 Protein Homology CDS 34859 36520 . + 0 ID=cds-HBQ7389706.1;Parent=gene-L8R42_001603;Dbxref=NCBI_GP:HBQ7389706.1;Name=HBQ7389706.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=L8R42_001603;product=transcriptional regulator HilA;protein_id=HBQ7389706.1;transl_table=11 DAFVNP010000020.1 tpg gene 36538 37020 . + . ID=gene-L8R42_001604;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=L8R42_001604 DAFVNP010000020.1 Protein Homology CDS 36538 37020 . + 0 ID=cds-HBQ7389707.1;Parent=gene-L8R42_001604;Dbxref=NCBI_GP:HBQ7389707.1;Name=HBQ7389707.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=L8R42_001604;product=SPI-1 type III secretion system invasion protein IagB;protein_id=HBQ7389707.1;transl_table=11 DAFVNP010000020.1 tpg gene 37074 38705 . - . ID=gene-L8R42_001605;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=L8R42_001605 DAFVNP010000020.1 Protein Homology CDS 37074 38705 . - 0 ID=cds-HBQ7389708.1;Parent=gene-L8R42_001605;Dbxref=NCBI_GP:HBQ7389708.1;Name=HBQ7389708.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=L8R42_001605;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=HBQ7389708.1;transl_table=11 DAFVNP010000020.1 tpg gene 38692 39084 . - . ID=gene-L8R42_001606;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=L8R42_001606 DAFVNP010000020.1 Protein Homology CDS 38692 39084 . - 0 ID=cds-HBQ7389709.1;Parent=gene-L8R42_001606;Dbxref=NCBI_GP:HBQ7389709.1;Name=HBQ7389709.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=L8R42_001606;product=chaperone SicP;protein_id=HBQ7389709.1;transl_table=11 DAFVNP010000020.1 tpg gene 39111 39371 . - . ID=gene-L8R42_001607;Name=L8R42_001607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001607 DAFVNP010000020.1 Protein Homology CDS 39111 39371 . - 0 ID=cds-HBQ7389710.1;Parent=gene-L8R42_001607;Dbxref=NCBI_GP:HBQ7389710.1;Name=HBQ7389710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=L8R42_001607;product=hypothetical protein;protein_id=HBQ7389710.1;transl_table=11 DAFVNP010000020.1 tpg gene 39415 39663 . - . ID=gene-L8R42_001608;Name=L8R42_001608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001608 DAFVNP010000020.1 Protein Homology CDS 39415 39663 . - 0 ID=cds-HBQ7389711.1;Parent=gene-L8R42_001608;Dbxref=NCBI_GP:HBQ7389711.1;Name=HBQ7389711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=L8R42_001608;product=acyl carrier protein;protein_id=HBQ7389711.1;transl_table=11 DAFVNP010000020.1 tpg gene 39682 41739 . - . ID=gene-L8R42_001609;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=L8R42_001609 DAFVNP010000020.1 Protein Homology CDS 39682 41739 . - 0 ID=cds-HBQ7389712.1;Parent=gene-L8R42_001609;Dbxref=NCBI_GP:HBQ7389712.1;Name=HBQ7389712.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=L8R42_001609;product=SPI-1 type III secretion system effector SipA;protein_id=HBQ7389712.1;transl_table=11 DAFVNP010000020.1 tpg gene 41758 42789 . - . ID=gene-L8R42_001610;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=L8R42_001610 DAFVNP010000020.1 Protein Homology CDS 41758 42789 . - 0 ID=cds-HBQ7389713.1;Parent=gene-L8R42_001610;Dbxref=NCBI_GP:HBQ7389713.1;Name=HBQ7389713.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=L8R42_001610;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=HBQ7389713.1;transl_table=11 DAFVNP010000020.1 tpg gene 42860 44089 . - . ID=gene-L8R42_001611;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=L8R42_001611 DAFVNP010000020.1 Protein Homology CDS 42860 44089 . - 0 ID=cds-HBQ7389714.1;Parent=gene-L8R42_001611;Dbxref=NCBI_GP:HBQ7389714.1;Name=HBQ7389714.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=L8R42_001611;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=HBQ7389714.1;transl_table=11 DAFVNP010000020.1 tpg gene 44117 45898 . - . ID=gene-L8R42_001612;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=L8R42_001612 DAFVNP010000020.1 Protein Homology CDS 44117 45898 . - 0 ID=cds-HBQ7389715.1;Parent=gene-L8R42_001612;Dbxref=NCBI_GP:HBQ7389715.1;Name=HBQ7389715.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=L8R42_001612;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=HBQ7389715.1;transl_table=11 DAFVNP010000020.1 tpg gene 45901 46398 . - . ID=gene-L8R42_001613;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=L8R42_001613 DAFVNP010000020.1 Protein Homology CDS 45901 46398 . - 0 ID=cds-HBQ7389716.1;Parent=gene-L8R42_001613;Dbxref=NCBI_GP:HBQ7389716.1;Name=HBQ7389716.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=L8R42_001613;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=HBQ7389716.1;transl_table=11 DAFVNP010000020.1 tpg gene 46536 47606 . - . ID=gene-L8R42_001614;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=L8R42_001614 DAFVNP010000020.1 Protein Homology CDS 46536 47606 . - 0 ID=cds-HBQ7389717.1;Parent=gene-L8R42_001614;Dbxref=NCBI_GP:HBQ7389717.1;Name=HBQ7389717.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=L8R42_001614;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=HBQ7389717.1;transl_table=11 DAFVNP010000020.1 tpg gene 47593 48384 . - . ID=gene-L8R42_001615;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=L8R42_001615 DAFVNP010000020.1 Protein Homology CDS 47593 48384 . - 0 ID=cds-HBQ7389718.1;Parent=gene-L8R42_001615;Dbxref=NCBI_GP:HBQ7389718.1;Name=HBQ7389718.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=L8R42_001615;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=HBQ7389718.1;transl_table=11 DAFVNP010000020.1 tpg gene 48388 48648 . - . ID=gene-L8R42_001616;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=L8R42_001616 DAFVNP010000020.1 Protein Homology CDS 48388 48648 . - 0 ID=cds-HBQ7389719.1;Parent=gene-L8R42_001616;Dbxref=NCBI_GP:HBQ7389719.1;Name=HBQ7389719.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=L8R42_001616;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=HBQ7389719.1;transl_table=11 DAFVNP010000020.1 tpg gene 48674 49348 . - . ID=gene-L8R42_001617;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=L8R42_001617 DAFVNP010000020.1 Protein Homology CDS 48674 49348 . - 0 ID=cds-HBQ7389720.1;Parent=gene-L8R42_001617;Dbxref=NCBI_GP:HBQ7389720.1;Name=HBQ7389720.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=L8R42_001617;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=HBQ7389720.1;transl_table=11 DAFVNP010000020.1 tpg gene 49338 50249 . - . ID=gene-L8R42_001618;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=L8R42_001618 DAFVNP010000020.1 Protein Homology CDS 49338 50249 . - 0 ID=cds-HBQ7389721.1;Parent=gene-L8R42_001618;Dbxref=NCBI_GP:HBQ7389721.1;Name=HBQ7389721.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=L8R42_001618;product=SPI-1 type III secretion system protein SpaO;protein_id=HBQ7389721.1;transl_table=11 DAFVNP010000020.1 tpg gene 50249 51259 . - . ID=gene-L8R42_001619;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=L8R42_001619 DAFVNP010000020.1 Protein Homology CDS 50249 51259 . - 0 ID=cds-HBQ7389722.1;Parent=gene-L8R42_001619;Dbxref=NCBI_GP:HBQ7389722.1;Name=HBQ7389722.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=L8R42_001619;product=SPI-1 type III secretion system protein SpaN;protein_id=HBQ7389722.1;transl_table=11 DAFVNP010000020.1 tpg gene 51259 51702 . - . ID=gene-L8R42_001620;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=L8R42_001620 DAFVNP010000020.1 Protein Homology CDS 51259 51702 . - 0 ID=cds-HBQ7389723.1;Parent=gene-L8R42_001620;Dbxref=NCBI_GP:HBQ7389723.1;Name=HBQ7389723.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=L8R42_001620;product=SPI-1 type III secretion system protein SpaM;protein_id=HBQ7389723.1;transl_table=11 DAFVNP010000020.1 tpg gene 51680 52975 . - . ID=gene-L8R42_001621;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=L8R42_001621 DAFVNP010000020.1 Protein Homology CDS 51680 52975 . - 0 ID=cds-HBQ7389724.1;Parent=gene-L8R42_001621;Dbxref=NCBI_GP:HBQ7389724.1;Name=HBQ7389724.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=L8R42_001621;product=SctN family type III secretion system ATPase InvC;protein_id=HBQ7389724.1;transl_table=11 DAFVNP010000020.1 tpg gene 52972 53379 . - . ID=gene-L8R42_001622;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=L8R42_001622 DAFVNP010000020.1 Protein Homology CDS 52972 53379 . - 0 ID=cds-HBQ7389725.1;Parent=gene-L8R42_001622;Dbxref=NCBI_GP:HBQ7389725.1;Name=HBQ7389725.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=L8R42_001622;product=SPI-1 type III secretion system chaperone SpaK;protein_id=HBQ7389725.1;transl_table=11 DAFVNP010000020.1 tpg gene 53403 55460 . - . ID=gene-L8R42_001623;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=L8R42_001623 DAFVNP010000020.1 Protein Homology CDS 53403 55460 . - 0 ID=cds-HBQ7389726.1;Parent=gene-L8R42_001623;Dbxref=NCBI_GP:HBQ7389726.1;Name=HBQ7389726.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=L8R42_001623;product=type III secretion system export apparatus protein InvA;protein_id=HBQ7389726.1;transl_table=11 DAFVNP010000020.1 tpg gene 55485 56603 . - . ID=gene-L8R42_001624;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=L8R42_001624 DAFVNP010000020.1 Protein Homology CDS 55485 56603 . - 0 ID=cds-HBQ7389727.1;Parent=gene-L8R42_001624;Dbxref=NCBI_GP:HBQ7389727.1;Name=HBQ7389727.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=L8R42_001624;product=type III secretion system gatekeeper InvE;protein_id=HBQ7389727.1;transl_table=11 DAFVNP010000020.1 tpg gene 56600 58288 . - . ID=gene-L8R42_001625;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=L8R42_001625 DAFVNP010000020.1 Protein Homology CDS 56600 58288 . - 0 ID=cds-HBQ7389728.1;Parent=gene-L8R42_001625;Dbxref=NCBI_GP:HBQ7389728.1;Name=HBQ7389728.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=L8R42_001625;product=type III secretion system outer membrane ring protein InvG;protein_id=HBQ7389728.1;transl_table=11 DAFVNP010000020.1 tpg gene 58285 58935 . - . ID=gene-L8R42_001626;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=L8R42_001626 DAFVNP010000020.1 Protein Homology CDS 58285 58935 . - 0 ID=cds-HBQ7389729.1;Parent=gene-L8R42_001626;Dbxref=NCBI_GP:HBQ7389729.1;Name=HBQ7389729.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=L8R42_001626;product=type III secretion system transcriptional activator InvF;protein_id=HBQ7389729.1;transl_table=11 DAFVNP010000020.1 tpg gene 59393 59836 . + . ID=gene-L8R42_001627;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=L8R42_001627 DAFVNP010000020.1 Protein Homology CDS 59393 59836 . + 0 ID=cds-HBQ7389730.1;Parent=gene-L8R42_001627;Dbxref=NCBI_GP:HBQ7389730.1;Name=HBQ7389730.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=L8R42_001627;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=HBQ7389730.1;transl_table=11 ##sequence-region DAFVNP010000021.1 1 58698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000021.1 tpg region 1 58698 . + . ID=DAFVNP010000021.1:1..58698;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000021.1 tpg gene 77 1744 . - . ID=gene-L8R42_001628;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=L8R42_001628 DAFVNP010000021.1 Protein Homology CDS 77 1744 . - 0 ID=cds-HBQ7389731.1;Parent=gene-L8R42_001628;Dbxref=NCBI_GP:HBQ7389731.1;Name=HBQ7389731.1;gbkey=CDS;gene=glnS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=L8R42_001628;product=glutamine--tRNA ligase;protein_id=HBQ7389731.1;transl_table=11 DAFVNP010000021.1 tpg gene 1955 3907 . - . ID=gene-L8R42_001629;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=L8R42_001629 DAFVNP010000021.1 Protein Homology CDS 1955 3907 . - 0 ID=cds-HBQ7389732.1;Parent=gene-L8R42_001629;Dbxref=NCBI_GP:HBQ7389732.1;Name=HBQ7389732.1;gbkey=CDS;gene=nagE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=L8R42_001629;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=HBQ7389732.1;transl_table=11 DAFVNP010000021.1 tpg gene 4234 5034 . + . ID=gene-L8R42_001630;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=L8R42_001630 DAFVNP010000021.1 Protein Homology CDS 4234 5034 . + 0 ID=cds-HBQ7389733.1;Parent=gene-L8R42_001630;Dbxref=NCBI_GP:HBQ7389733.1;Name=HBQ7389733.1;gbkey=CDS;gene=nagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=L8R42_001630;product=glucosamine-6-phosphate deaminase;protein_id=HBQ7389733.1;transl_table=11 DAFVNP010000021.1 tpg gene 5094 6248 . + . ID=gene-L8R42_001631;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=L8R42_001631 DAFVNP010000021.1 Protein Homology CDS 5094 6248 . + 0 ID=cds-HBQ7389734.1;Parent=gene-L8R42_001631;Dbxref=NCBI_GP:HBQ7389734.1;Name=HBQ7389734.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=L8R42_001631;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=HBQ7389734.1;transl_table=11 DAFVNP010000021.1 tpg gene 6253 7473 . + . ID=gene-L8R42_001632;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=L8R42_001632 DAFVNP010000021.1 Protein Homology CDS 6253 7473 . + 0 ID=cds-HBQ7389735.1;Parent=gene-L8R42_001632;Dbxref=NCBI_GP:HBQ7389735.1;Name=HBQ7389735.1;gbkey=CDS;gene=nagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=L8R42_001632;product=DNA-binding transcriptional regulator NagC;protein_id=HBQ7389735.1;transl_table=11 DAFVNP010000021.1 tpg gene 7520 8272 . + . ID=gene-L8R42_001633;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=L8R42_001633 DAFVNP010000021.1 Protein Homology CDS 7520 8272 . + 0 ID=cds-HBQ7389736.1;Parent=gene-L8R42_001633;Dbxref=NCBI_GP:HBQ7389736.1;Name=HBQ7389736.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=L8R42_001633;product=ribonucleotide monophosphatase NagD;protein_id=HBQ7389736.1;transl_table=11 DAFVNP010000021.1 tpg gene 8562 10226 . + . ID=gene-L8R42_001634;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=L8R42_001634 DAFVNP010000021.1 Protein Homology CDS 8562 10226 . + 0 ID=cds-HBQ7389737.1;Parent=gene-L8R42_001634;Dbxref=NCBI_GP:HBQ7389737.1;Name=HBQ7389737.1;gbkey=CDS;gene=asnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=L8R42_001634;product=asparagine synthase B;protein_id=HBQ7389737.1;transl_table=11 DAFVNP010000021.1 tpg gene 10449 10525 . + . ID=gene-L8R42_001635;Name=L8R42_001635;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001635 DAFVNP010000021.1 tRNAscan-SE tRNA 10449 10525 . + . ID=rna-L8R42_001635;Parent=gene-L8R42_001635;anticodon=(pos:10483..10485);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001635;product=tRNA-Met DAFVNP010000021.1 tRNAscan-SE exon 10449 10525 . + . ID=exon-L8R42_001635-1;Parent=rna-L8R42_001635;anticodon=(pos:10483..10485);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001635;product=tRNA-Met DAFVNP010000021.1 tpg gene 10534 10618 . + . ID=gene-L8R42_001636;Name=L8R42_001636;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001636 DAFVNP010000021.1 tRNAscan-SE tRNA 10534 10618 . + . ID=rna-L8R42_001636;Parent=gene-L8R42_001636;anticodon=(pos:10568..10570);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001636;product=tRNA-Leu DAFVNP010000021.1 tRNAscan-SE exon 10534 10618 . + . ID=exon-L8R42_001636-1;Parent=rna-L8R42_001636;anticodon=(pos:10568..10570);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001636;product=tRNA-Leu DAFVNP010000021.1 tpg gene 10642 10716 . + . ID=gene-L8R42_001637;Name=L8R42_001637;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001637 DAFVNP010000021.1 tRNAscan-SE tRNA 10642 10716 . + . ID=rna-L8R42_001637;Parent=gene-L8R42_001637;anticodon=(pos:10674..10676);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001637;product=tRNA-Gln DAFVNP010000021.1 tRNAscan-SE exon 10642 10716 . + . ID=exon-L8R42_001637-1;Parent=rna-L8R42_001637;anticodon=(pos:10674..10676);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001637;product=tRNA-Gln DAFVNP010000021.1 tpg gene 10752 10826 . + . ID=gene-L8R42_001638;Name=L8R42_001638;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001638 DAFVNP010000021.1 tRNAscan-SE tRNA 10752 10826 . + . ID=rna-L8R42_001638;Parent=gene-L8R42_001638;anticodon=(pos:10784..10786);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001638;product=tRNA-Gln DAFVNP010000021.1 tRNAscan-SE exon 10752 10826 . + . ID=exon-L8R42_001638-1;Parent=rna-L8R42_001638;anticodon=(pos:10784..10786);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001638;product=tRNA-Gln DAFVNP010000021.1 tpg gene 10842 10918 . + . ID=gene-L8R42_001639;Name=L8R42_001639;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001639 DAFVNP010000021.1 tRNAscan-SE tRNA 10842 10918 . + . ID=rna-L8R42_001639;Parent=gene-L8R42_001639;anticodon=(pos:10876..10878);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001639;product=tRNA-Met DAFVNP010000021.1 tRNAscan-SE exon 10842 10918 . + . ID=exon-L8R42_001639-1;Parent=rna-L8R42_001639;anticodon=(pos:10876..10878);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001639;product=tRNA-Met DAFVNP010000021.1 tpg gene 10965 11039 . + . ID=gene-L8R42_001640;Name=L8R42_001640;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001640 DAFVNP010000021.1 tRNAscan-SE tRNA 10965 11039 . + . ID=rna-L8R42_001640;Parent=gene-L8R42_001640;anticodon=(pos:10997..10999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001640;product=tRNA-Gln DAFVNP010000021.1 tRNAscan-SE exon 10965 11039 . + . ID=exon-L8R42_001640-1;Parent=rna-L8R42_001640;anticodon=(pos:10997..10999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001640;product=tRNA-Gln DAFVNP010000021.1 tpg gene 11083 11157 . + . ID=gene-L8R42_001641;Name=L8R42_001641;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001641 DAFVNP010000021.1 tRNAscan-SE tRNA 11083 11157 . + . ID=rna-L8R42_001641;Parent=gene-L8R42_001641;anticodon=(pos:11115..11117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001641;product=tRNA-Gln DAFVNP010000021.1 tRNAscan-SE exon 11083 11157 . + . ID=exon-L8R42_001641-1;Parent=rna-L8R42_001641;anticodon=(pos:11115..11117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001641;product=tRNA-Gln DAFVNP010000021.1 tpg gene 11293 11868 . + . ID=gene-L8R42_001642;Name=L8R42_001642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001642 DAFVNP010000021.1 Protein Homology CDS 11293 11868 . + 0 ID=cds-HBQ7389738.1;Parent=gene-L8R42_001642;Dbxref=NCBI_GP:HBQ7389738.1;Name=HBQ7389738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=L8R42_001642;product=hypothetical protein;protein_id=HBQ7389738.1;transl_table=11 DAFVNP010000021.1 tpg gene 11935 13110 . - . ID=gene-L8R42_001643;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=L8R42_001643 DAFVNP010000021.1 Protein Homology CDS 11935 13110 . - 0 ID=cds-HBQ7389739.1;Parent=gene-L8R42_001643;Dbxref=NCBI_GP:HBQ7389739.1;Name=HBQ7389739.1;gbkey=CDS;gene=ubiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=L8R42_001643;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=HBQ7389739.1;transl_table=11 DAFVNP010000021.1 tpg gene 13254 14678 . + . ID=gene-L8R42_001644;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=L8R42_001644 DAFVNP010000021.1 Protein Homology CDS 13254 14678 . + 0 ID=cds-HBQ7389740.1;Parent=gene-L8R42_001644;Dbxref=NCBI_GP:HBQ7389740.1;Name=HBQ7389740.1;gbkey=CDS;gene=miaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=L8R42_001644;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=HBQ7389740.1;transl_table=11 DAFVNP010000021.1 tpg gene 14883 15929 . + . ID=gene-L8R42_001645;Name=L8R42_001645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001645 DAFVNP010000021.1 Protein Homology CDS 14883 15929 . + 0 ID=cds-HBQ7389741.1;Parent=gene-L8R42_001645;Dbxref=NCBI_GP:HBQ7389741.1;Name=HBQ7389741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=L8R42_001645;product=PhoH family protein;protein_id=HBQ7389741.1;transl_table=11 DAFVNP010000021.1 tpg gene 15926 16399 . + . ID=gene-L8R42_001646;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=L8R42_001646 DAFVNP010000021.1 Protein Homology CDS 15926 16399 . + 0 ID=cds-HBQ7389742.1;Parent=gene-L8R42_001646;Dbxref=NCBI_GP:HBQ7389742.1;Name=HBQ7389742.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=L8R42_001646;product=rRNA maturation RNase YbeY;protein_id=HBQ7389742.1;transl_table=11 DAFVNP010000021.1 tpg gene 16557 17435 . + . ID=gene-L8R42_001647;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=L8R42_001647 DAFVNP010000021.1 Protein Homology CDS 16557 17435 . + 0 ID=cds-HBQ7389743.1;Parent=gene-L8R42_001647;Dbxref=NCBI_GP:HBQ7389743.1;Name=HBQ7389743.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;gbkey=CDS;gene=corC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=L8R42_001647;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=HBQ7389743.1;transl_table=11 DAFVNP010000021.1 tpg gene 17455 18993 . + . ID=gene-L8R42_001648;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=L8R42_001648 DAFVNP010000021.1 Protein Homology CDS 17455 18993 . + 0 ID=cds-HBQ7389744.1;Parent=gene-L8R42_001648;Dbxref=NCBI_GP:HBQ7389744.1;Name=HBQ7389744.1;gbkey=CDS;gene=lnt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=L8R42_001648;product=apolipoprotein N-acyltransferase;protein_id=HBQ7389744.1;transl_table=11 DAFVNP010000021.1 tpg gene 19348 20256 . + . ID=gene-L8R42_001649;Name=L8R42_001649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001649 DAFVNP010000021.1 Protein Homology CDS 19348 20256 . + 0 ID=cds-HBQ7389745.1;Parent=gene-L8R42_001649;Dbxref=NCBI_GP:HBQ7389745.1;Name=HBQ7389745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=L8R42_001649;product=amino acid ABC transporter substrate-binding protein;protein_id=HBQ7389745.1;transl_table=11 DAFVNP010000021.1 tpg gene 20416 21156 . + . ID=gene-L8R42_001650;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=L8R42_001650 DAFVNP010000021.1 Protein Homology CDS 20416 21156 . + 0 ID=cds-HBQ7389746.1;Parent=gene-L8R42_001650;Dbxref=NCBI_GP:HBQ7389746.1;Name=HBQ7389746.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=L8R42_001650;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=HBQ7389746.1;transl_table=11 DAFVNP010000021.1 tpg gene 21156 21830 . + . ID=gene-L8R42_001651;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=L8R42_001651 DAFVNP010000021.1 Protein Homology CDS 21156 21830 . + 0 ID=cds-HBQ7389747.1;Parent=gene-L8R42_001651;Dbxref=NCBI_GP:HBQ7389747.1;Name=HBQ7389747.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=L8R42_001651;product=glutamate/aspartate ABC transporter permease GltK;protein_id=HBQ7389747.1;transl_table=11 DAFVNP010000021.1 tpg gene 21830 22555 . + . ID=gene-L8R42_001652;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=L8R42_001652 DAFVNP010000021.1 Protein Homology CDS 21830 22555 . + 0 ID=cds-HBQ7389748.1;Parent=gene-L8R42_001652;Dbxref=NCBI_GP:HBQ7389748.1;Name=HBQ7389748.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=L8R42_001652;product=glutamate/aspartate ABC transporter ATP binding protein GltL;protein_id=HBQ7389748.1;transl_table=11 DAFVNP010000021.1 tpg gene 22672 23607 . + . ID=gene-L8R42_001653;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=L8R42_001653 DAFVNP010000021.1 Protein Homology CDS 22672 23607 . + 0 ID=cds-HBQ7389749.1;Parent=gene-L8R42_001653;Dbxref=NCBI_GP:HBQ7389749.1;Name=HBQ7389749.1;gbkey=CDS;gene=rihA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=L8R42_001653;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=HBQ7389749.1;transl_table=11 DAFVNP010000021.1 tpg gene 23639 24877 . + . ID=gene-L8R42_001654;Name=L8R42_001654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001654 DAFVNP010000021.1 Protein Homology CDS 23639 24877 . + 0 ID=cds-HBQ7389750.1;Parent=gene-L8R42_001654;Dbxref=NCBI_GP:HBQ7389750.1;Name=HBQ7389750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=L8R42_001654;product=hypothetical protein;protein_id=HBQ7389750.1;transl_table=11 DAFVNP010000021.1 tpg gene 24953 26632 . + . ID=gene-L8R42_001655;Name=L8R42_001655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001655 DAFVNP010000021.1 Protein Homology CDS 24953 26632 . + 0 ID=cds-HBQ7389751.1;Parent=gene-L8R42_001655;Dbxref=NCBI_GP:HBQ7389751.1;Name=HBQ7389751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=L8R42_001655;product=molecular chaperone HscC;protein_id=HBQ7389751.1;transl_table=11 DAFVNP010000021.1 tpg gene 26654 28117 . - . ID=gene-L8R42_001656;Name=L8R42_001656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001656 DAFVNP010000021.1 Protein Homology CDS 26654 28117 . - 0 ID=cds-HBQ7389752.1;Parent=gene-L8R42_001656;Dbxref=NCBI_GP:HBQ7389752.1;Name=HBQ7389752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=L8R42_001656;product=J domain-containing protein;protein_id=HBQ7389752.1;transl_table=11 DAFVNP010000021.1 tpg gene 28114 28809 . - . ID=gene-L8R42_001657;Name=L8R42_001657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001657 DAFVNP010000021.1 Protein Homology CDS 28114 28809 . - 0 ID=cds-HBQ7389753.1;Parent=gene-L8R42_001657;Dbxref=NCBI_GP:HBQ7389753.1;Name=HBQ7389753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=L8R42_001657;product=DUF1266 domain-containing protein;protein_id=HBQ7389753.1;transl_table=11 DAFVNP010000021.1 tpg gene 28821 30254 . - . ID=gene-L8R42_001658;Name=L8R42_001658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001658 DAFVNP010000021.1 Protein Homology CDS 28821 30254 . - 0 ID=cds-HBQ7389754.1;Parent=gene-L8R42_001658;Dbxref=NCBI_GP:HBQ7389754.1;Name=HBQ7389754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=L8R42_001658;product=J domain-containing protein;protein_id=HBQ7389754.1;transl_table=11 DAFVNP010000021.1 tpg gene 30251 30958 . - . ID=gene-L8R42_001659;Name=L8R42_001659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001659 DAFVNP010000021.1 Protein Homology CDS 30251 30958 . - 0 ID=cds-HBQ7389755.1;Parent=gene-L8R42_001659;Dbxref=NCBI_GP:HBQ7389755.1;Name=HBQ7389755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=L8R42_001659;product=DUF1266 domain-containing protein;protein_id=HBQ7389755.1;transl_table=11 DAFVNP010000021.1 tpg gene 31083 32078 . + . ID=gene-L8R42_001660;Name=L8R42_001660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001660 DAFVNP010000021.1 Protein Homology CDS 31083 32078 . + 0 ID=cds-HBQ7389756.1;Parent=gene-L8R42_001660;Dbxref=NCBI_GP:HBQ7389756.1;Name=HBQ7389756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=L8R42_001660;product=sel1 repeat family protein;protein_id=HBQ7389756.1;transl_table=11 DAFVNP010000021.1 tpg gene 32117 32590 . - . ID=gene-L8R42_001661;Name=L8R42_001661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001661 DAFVNP010000021.1 Protein Homology CDS 32117 32590 . - 0 ID=cds-HBQ7389757.1;Parent=gene-L8R42_001661;Dbxref=NCBI_GP:HBQ7389757.1;Name=HBQ7389757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=L8R42_001661;product=zinc ribbon-containing protein;protein_id=HBQ7389757.1;transl_table=11 DAFVNP010000021.1 tpg gene 32683 34611 . - . ID=gene-L8R42_001662;Name=L8R42_001662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001662 DAFVNP010000021.1 Protein Homology CDS 32683 34611 . - 0 ID=cds-HBQ7389758.1;Parent=gene-L8R42_001662;Dbxref=NCBI_GP:HBQ7389758.1;Name=HBQ7389758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=L8R42_001662;product=sigma-54-dependent transcriptional regulator;protein_id=HBQ7389758.1;transl_table=11 DAFVNP010000021.1 tpg gene 34679 35632 . - . ID=gene-L8R42_001663;Name=L8R42_001663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001663 DAFVNP010000021.1 Protein Homology CDS 34679 35632 . - 0 ID=cds-HBQ7389759.1;Parent=gene-L8R42_001663;Dbxref=NCBI_GP:HBQ7389759.1;Name=HBQ7389759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=L8R42_001663;product=2-keto-3-deoxygluconate permease 2;protein_id=HBQ7389759.1;transl_table=11 DAFVNP010000021.1 tpg gene 35682 36854 . - . ID=gene-L8R42_001664;Name=L8R42_001664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001664 DAFVNP010000021.1 Protein Homology CDS 35682 36854 . - 0 ID=cds-HBQ7389760.1;Parent=gene-L8R42_001664;Dbxref=NCBI_GP:HBQ7389760.1;Name=HBQ7389760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=L8R42_001664;product=UxaA family hydrolase;protein_id=HBQ7389760.1;transl_table=11 DAFVNP010000021.1 tpg gene 36871 37212 . - . ID=gene-L8R42_001665;Name=L8R42_001665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001665 DAFVNP010000021.1 Protein Homology CDS 36871 37212 . - 0 ID=cds-HBQ7389761.1;Parent=gene-L8R42_001665;Dbxref=NCBI_GP:HBQ7389761.1;Name=HBQ7389761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=L8R42_001665;product=UxaA family hydrolase;protein_id=HBQ7389761.1;transl_table=11 DAFVNP010000021.1 tpg gene 37449 40031 . + . ID=gene-L8R42_001666;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=L8R42_001666 DAFVNP010000021.1 Protein Homology CDS 37449 40031 . + 0 ID=cds-HBQ7389762.1;Parent=gene-L8R42_001666;Dbxref=NCBI_GP:HBQ7389762.1;Name=HBQ7389762.1;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=L8R42_001666;product=leucine--tRNA ligase;protein_id=HBQ7389762.1;transl_table=11 DAFVNP010000021.1 tpg gene 40046 40636 . + . ID=gene-L8R42_001667;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=L8R42_001667 DAFVNP010000021.1 Protein Homology CDS 40046 40636 . + 0 ID=cds-HBQ7389763.1;Parent=gene-L8R42_001667;Dbxref=NCBI_GP:HBQ7389763.1;Name=HBQ7389763.1;gbkey=CDS;gene=lptE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=L8R42_001667;product=LPS assembly lipoprotein LptE;protein_id=HBQ7389763.1;transl_table=11 DAFVNP010000021.1 tpg gene 40636 41667 . + . ID=gene-L8R42_001668;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=L8R42_001668 DAFVNP010000021.1 Protein Homology CDS 40636 41667 . + 0 ID=cds-HBQ7389764.1;Parent=gene-L8R42_001668;Dbxref=NCBI_GP:HBQ7389764.1;Name=HBQ7389764.1;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=L8R42_001668;product=DNA polymerase III subunit delta;protein_id=HBQ7389764.1;transl_table=11 DAFVNP010000021.1 tpg gene 41669 42310 . + . ID=gene-L8R42_001669;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=L8R42_001669 DAFVNP010000021.1 Protein Homology CDS 41669 42310 . + 0 ID=cds-HBQ7389765.1;Parent=gene-L8R42_001669;Dbxref=NCBI_GP:HBQ7389765.1;Name=HBQ7389765.1;gbkey=CDS;gene=nadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=L8R42_001669;product=nicotinate-nucleotide adenylyltransferase;protein_id=HBQ7389765.1;transl_table=11 DAFVNP010000021.1 tpg gene 42285 43379 . - . ID=gene-L8R42_001670;Name=L8R42_001670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001670 DAFVNP010000021.1 Protein Homology CDS 42285 43379 . - 0 ID=cds-HBQ7389766.1;Parent=gene-L8R42_001670;Dbxref=NCBI_GP:HBQ7389766.1;Name=HBQ7389766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=L8R42_001670;product=threonine-phosphate decarboxylase;protein_id=HBQ7389766.1;transl_table=11 DAFVNP010000021.1 tpg gene 43476 44084 . + . ID=gene-L8R42_001671;Name=L8R42_001671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001671 DAFVNP010000021.1 Protein Homology CDS 43476 44084 . + 0 ID=cds-HBQ7389767.1;Parent=gene-L8R42_001671;Dbxref=NCBI_GP:HBQ7389767.1;Name=HBQ7389767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=L8R42_001671;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=HBQ7389767.1;transl_table=11 DAFVNP010000021.1 tpg gene 44413 44730 . + . ID=gene-L8R42_001672;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;gene_synonym=rsfA;locus_tag=L8R42_001672 DAFVNP010000021.1 Protein Homology CDS 44413 44730 . + 0 ID=cds-HBQ7389768.1;Parent=gene-L8R42_001672;Dbxref=NCBI_GP:HBQ7389768.1;Name=HBQ7389768.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=L8R42_001672;product=ribosome silencing factor;protein_id=HBQ7389768.1;transl_table=11 DAFVNP010000021.1 tpg gene 44734 45201 . + . ID=gene-L8R42_001673;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=L8R42_001673 DAFVNP010000021.1 Protein Homology CDS 44734 45201 . + 0 ID=cds-HBQ7389769.1;Parent=gene-L8R42_001673;Dbxref=NCBI_GP:HBQ7389769.1;Name=HBQ7389769.1;gbkey=CDS;gene=rlmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=L8R42_001673;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=HBQ7389769.1;transl_table=11 DAFVNP010000021.1 tpg gene 45232 47133 . + . ID=gene-L8R42_001674;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=L8R42_001674 DAFVNP010000021.1 Protein Homology CDS 45232 47133 . + 0 ID=cds-HBQ7389770.1;Parent=gene-L8R42_001674;Dbxref=NCBI_GP:HBQ7389770.1;Name=HBQ7389770.1;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=L8R42_001674;product=peptidoglycan DD-transpeptidase MrdA;protein_id=HBQ7389770.1;transl_table=11 DAFVNP010000021.1 tpg gene 47136 48248 . + . ID=gene-L8R42_001675;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=L8R42_001675 DAFVNP010000021.1 Protein Homology CDS 47136 48248 . + 0 ID=cds-HBQ7389771.1;Parent=gene-L8R42_001675;Dbxref=NCBI_GP:HBQ7389771.1;Name=HBQ7389771.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=L8R42_001675;product=peptidoglycan glycosyltransferase MrdB;protein_id=HBQ7389771.1;transl_table=11 DAFVNP010000021.1 tpg gene 48259 49392 . + . ID=gene-L8R42_001676;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=L8R42_001676 DAFVNP010000021.1 Protein Homology CDS 48259 49392 . + 0 ID=cds-HBQ7389772.1;Parent=gene-L8R42_001676;Dbxref=NCBI_GP:HBQ7389772.1;Name=HBQ7389772.1;gbkey=CDS;gene=rlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=L8R42_001676;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=HBQ7389772.1;transl_table=11 DAFVNP010000021.1 tpg gene 49532 50743 . + . ID=gene-L8R42_001677;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=L8R42_001677 DAFVNP010000021.1 Protein Homology CDS 49532 50743 . + 0 ID=cds-HBQ7389773.1;Parent=gene-L8R42_001677;Dbxref=NCBI_GP:HBQ7389773.1;Name=HBQ7389773.1;gbkey=CDS;gene=dacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=L8R42_001677;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=HBQ7389773.1;transl_table=11 DAFVNP010000021.1 tpg gene 50851 51114 . + . ID=gene-L8R42_001678;Name=L8R42_001678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001678 DAFVNP010000021.1 Protein Homology CDS 50851 51114 . + 0 ID=cds-HBQ7389774.1;Parent=gene-L8R42_001678;Dbxref=NCBI_GP:HBQ7389774.1;Name=HBQ7389774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=L8R42_001678;product=YbeD family protein;protein_id=HBQ7389774.1;transl_table=11 DAFVNP010000021.1 tpg gene 51215 51856 . + . ID=gene-L8R42_001679;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=L8R42_001679 DAFVNP010000021.1 Protein Homology CDS 51215 51856 . + 0 ID=cds-HBQ7389775.1;Parent=gene-L8R42_001679;Dbxref=NCBI_GP:HBQ7389775.1;Name=HBQ7389775.1;gbkey=CDS;gene=lipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=L8R42_001679;product=lipoyl(octanoyl) transferase LipB;protein_id=HBQ7389775.1;transl_table=11 DAFVNP010000021.1 tpg gene 52158 53111 . + . ID=gene-L8R42_001680;Name=L8R42_001680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001680 DAFVNP010000021.1 Protein Homology CDS 52158 53111 . + 0 ID=cds-HBQ7389776.1;Parent=gene-L8R42_001680;Dbxref=NCBI_GP:HBQ7389776.1;Name=HBQ7389776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=L8R42_001680;product=DNA-binding transcriptional regulator;protein_id=HBQ7389776.1;transl_table=11 DAFVNP010000021.1 tpg gene 53317 54282 . + . ID=gene-L8R42_001681;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=L8R42_001681 DAFVNP010000021.1 Protein Homology CDS 53317 54282 . + 0 ID=cds-HBQ7389777.1;Parent=gene-L8R42_001681;Dbxref=NCBI_GP:HBQ7389777.1;Name=HBQ7389777.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=L8R42_001681;product=lipoyl synthase;protein_id=HBQ7389777.1;transl_table=11 DAFVNP010000021.1 tpg gene 54368 54571 . - . ID=gene-L8R42_001682;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=L8R42_001682 DAFVNP010000021.1 Protein Homology CDS 54368 54571 . - 0 ID=cds-HBQ7389778.1;Parent=gene-L8R42_001682;Dbxref=NCBI_GP:HBQ7389778.1;Name=HBQ7389778.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=L8R42_001682;product=twin-arginine translocase subunit TatE;protein_id=HBQ7389778.1;transl_table=11 DAFVNP010000021.1 tpg gene 54700 55488 . - . ID=gene-L8R42_001683;Name=L8R42_001683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001683 DAFVNP010000021.1 Protein Homology CDS 54700 55488 . - 0 ID=cds-HBQ7389779.1;Parent=gene-L8R42_001683;Dbxref=NCBI_GP:HBQ7389779.1;Name=HBQ7389779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=L8R42_001683;product=deaminated glutathione amidase;protein_id=HBQ7389779.1;transl_table=11 DAFVNP010000021.1 tpg gene 55579 55962 . + . ID=gene-L8R42_001684;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=L8R42_001684 DAFVNP010000021.1 Protein Homology CDS 55579 55962 . + 0 ID=cds-HBQ7389780.1;Parent=gene-L8R42_001684;Dbxref=NCBI_GP:HBQ7389780.1;Name=HBQ7389780.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=L8R42_001684;product=fluoride efflux transporter CrcB;protein_id=HBQ7389780.1;transl_table=11 DAFVNP010000021.1 tpg gene 56020 56229 . - . ID=gene-L8R42_001685;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=L8R42_001685 DAFVNP010000021.1 Protein Homology CDS 56020 56229 . - 0 ID=cds-HBQ7389781.1;Parent=gene-L8R42_001685;Dbxref=NCBI_GP:HBQ7389781.1;Name=HBQ7389781.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=L8R42_001685;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HBQ7389781.1;transl_table=11 DAFVNP010000021.1 tpg gene 56417 56989 . - . ID=gene-L8R42_001686;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=L8R42_001686 DAFVNP010000021.1 Protein Homology CDS 56417 56989 . - 0 ID=cds-HBQ7389782.1;Parent=gene-L8R42_001686;Dbxref=NCBI_GP:HBQ7389782.1;Name=HBQ7389782.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=L8R42_001686;product=lipid IV(A) palmitoyltransferase PagP;protein_id=HBQ7389782.1;transl_table=11 DAFVNP010000021.1 tpg gene 57367 58698 . + . ID=gene-L8R42_001687;Name=dcuC;end_range=58698,.;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=L8R42_001687;partial=true DAFVNP010000021.1 Protein Homology CDS 57367 58698 . + 0 ID=cds-HBQ7389783.1;Parent=gene-L8R42_001687;Dbxref=NCBI_GP:HBQ7389783.1;Name=HBQ7389783.1;end_range=58698,.;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=L8R42_001687;partial=true;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=HBQ7389783.1;transl_table=11 ##sequence-region DAFVNP010000022.1 1 58438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000022.1 tpg region 1 58438 . + . ID=DAFVNP010000022.1:1..58438;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000022.1 tpg gene 276 725 . + . ID=gene-L8R42_001688;Name=L8R42_001688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001688 DAFVNP010000022.1 Protein Homology CDS 276 725 . + 0 ID=cds-HBQ7389784.1;Parent=gene-L8R42_001688;Dbxref=NCBI_GP:HBQ7389784.1;Name=HBQ7389784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=L8R42_001688;product=hypothetical protein;protein_id=HBQ7389784.1;transl_table=11 DAFVNP010000022.1 tpg gene 710 1057 . + . ID=gene-L8R42_001689;Name=L8R42_001689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001689 DAFVNP010000022.1 Protein Homology CDS 710 1057 . + 0 ID=cds-HBQ7389785.1;Parent=gene-L8R42_001689;Dbxref=NCBI_GP:HBQ7389785.1;Name=HBQ7389785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=L8R42_001689;product=DUF1493 family protein;protein_id=HBQ7389785.1;transl_table=11 DAFVNP010000022.1 tpg gene 1330 1656 . - . ID=gene-L8R42_001690;Name=L8R42_001690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001690 DAFVNP010000022.1 Protein Homology CDS 1330 1656 . - 0 ID=cds-HBQ7389786.1;Parent=gene-L8R42_001690;Dbxref=NCBI_GP:HBQ7389786.1;Name=HBQ7389786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=L8R42_001690;product=hypothetical protein;protein_id=HBQ7389786.1;transl_table=11 DAFVNP010000022.1 tpg pseudogene 1897 2097 . + . ID=gene-L8R42_001691;Name=L8R42_001691;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001691;pseudo=true DAFVNP010000022.1 Protein Homology CDS 1897 2097 . + 0 ID=cds-L8R42_001691;Parent=gene-L8R42_001691;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=L8R42_001691;product=transposase;pseudo=true;transl_table=11 DAFVNP010000022.1 tpg gene 2368 2658 . + . ID=gene-L8R42_001692;Name=L8R42_001692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001692 DAFVNP010000022.1 Protein Homology CDS 2368 2658 . + 0 ID=cds-HBQ7389787.1;Parent=gene-L8R42_001692;Dbxref=NCBI_GP:HBQ7389787.1;Name=HBQ7389787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=L8R42_001692;product=DUF1778 domain-containing protein;protein_id=HBQ7389787.1;transl_table=11 DAFVNP010000022.1 tpg gene 2655 3182 . + . ID=gene-L8R42_001693;Name=L8R42_001693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001693 DAFVNP010000022.1 Protein Homology CDS 2655 3182 . + 0 ID=cds-HBQ7389788.1;Parent=gene-L8R42_001693;Dbxref=NCBI_GP:HBQ7389788.1;Name=HBQ7389788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=L8R42_001693;product=GNAT family N-acetyltransferase;protein_id=HBQ7389788.1;transl_table=11 DAFVNP010000022.1 tpg pseudogene 3255 3472 . - . ID=gene-L8R42_001694;Name=L8R42_001694;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001694;pseudo=true DAFVNP010000022.1 Protein Homology CDS 3255 3472 . - 0 ID=cds-L8R42_001694;Parent=gene-L8R42_001694;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=L8R42_001694;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 DAFVNP010000022.1 tpg gene 3807 4463 . + . ID=gene-L8R42_001695;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=L8R42_001695 DAFVNP010000022.1 Protein Homology CDS 3807 4463 . + 0 ID=cds-HBQ7389789.1;Parent=gene-L8R42_001695;Dbxref=NCBI_GP:HBQ7389789.1;Name=HBQ7389789.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=L8R42_001695;product=protein-serine/threonine phosphatase;protein_id=HBQ7389789.1;transl_table=11 DAFVNP010000022.1 tpg gene 4635 5129 . - . ID=gene-L8R42_001696;Name=L8R42_001696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001696 DAFVNP010000022.1 Protein Homology CDS 4635 5129 . - 0 ID=cds-HBQ7389790.1;Parent=gene-L8R42_001696;Dbxref=NCBI_GP:HBQ7389790.1;Name=HBQ7389790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522903.1;locus_tag=L8R42_001696;product=hypothetical protein;protein_id=HBQ7389790.1;transl_table=11 DAFVNP010000022.1 tpg gene 5156 5824 . - . ID=gene-L8R42_001697;Name=L8R42_001697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001697 DAFVNP010000022.1 Protein Homology CDS 5156 5824 . - 0 ID=cds-HBQ7389791.1;Parent=gene-L8R42_001697;Dbxref=NCBI_GP:HBQ7389791.1;Name=HBQ7389791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445913.1;locus_tag=L8R42_001697;product=hypothetical protein;protein_id=HBQ7389791.1;transl_table=11 DAFVNP010000022.1 tpg pseudogene 5981 6199 . - . ID=gene-L8R42_001698;Name=L8R42_001698;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001698;pseudo=true DAFVNP010000022.1 Protein Homology CDS 5981 6199 . - 0 ID=cds-L8R42_001698;Parent=gene-L8R42_001698;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=L8R42_001698;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000022.1 tpg pseudogene 6410 6808 . - . ID=gene-L8R42_001699;Name=L8R42_001699;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001699;pseudo=true DAFVNP010000022.1 Protein Homology CDS 6410 6808 . - 0 ID=cds-L8R42_001699;Parent=gene-L8R42_001699;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=L8R42_001699;product=cytoplasmic protein;pseudo=true;transl_table=11 DAFVNP010000022.1 tpg gene 6967 9534 . + . ID=gene-L8R42_001700;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=L8R42_001700 DAFVNP010000022.1 Protein Homology CDS 6967 9534 . + 0 ID=cds-HBQ7389792.1;Parent=gene-L8R42_001700;Dbxref=NCBI_GP:HBQ7389792.1;Name=HBQ7389792.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=L8R42_001700;product=DNA mismatch repair protein MutS;protein_id=HBQ7389792.1;transl_table=11 DAFVNP010000022.1 tpg gene 9590 9970 . - . ID=gene-L8R42_001701;Name=L8R42_001701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001701 DAFVNP010000022.1 Protein Homology CDS 9590 9970 . - 0 ID=cds-HBQ7389793.1;Parent=gene-L8R42_001701;Dbxref=NCBI_GP:HBQ7389793.1;Name=HBQ7389793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=L8R42_001701;product=DUF4440 domain-containing protein;protein_id=HBQ7389793.1;transl_table=11 DAFVNP010000022.1 tpg gene 9967 11175 . - . ID=gene-L8R42_001702;Name=L8R42_001702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001702 DAFVNP010000022.1 Protein Homology CDS 9967 11175 . - 0 ID=cds-HBQ7389794.1;Parent=gene-L8R42_001702;Dbxref=NCBI_GP:HBQ7389794.1;Name=HBQ7389794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=L8R42_001702;product=MFS transporter;protein_id=HBQ7389794.1;transl_table=11 DAFVNP010000022.1 tpg gene 11263 12195 . + . ID=gene-L8R42_001703;Name=L8R42_001703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001703 DAFVNP010000022.1 Protein Homology CDS 11263 12195 . + 0 ID=cds-HBQ7389795.1;Parent=gene-L8R42_001703;Dbxref=NCBI_GP:HBQ7389795.1;Name=HBQ7389795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=L8R42_001703;product=LysR family transcriptional regulator;protein_id=HBQ7389795.1;transl_table=11 DAFVNP010000022.1 tpg gene 12237 13733 . - . ID=gene-L8R42_001704;Name=L8R42_001704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001704 DAFVNP010000022.1 Protein Homology CDS 12237 13733 . - 0 ID=cds-HBQ7389796.1;Parent=gene-L8R42_001704;Dbxref=NCBI_GP:HBQ7389796.1;Name=HBQ7389796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=L8R42_001704;product=permease;protein_id=HBQ7389796.1;transl_table=11 DAFVNP010000022.1 tpg gene 13730 14680 . - . ID=gene-L8R42_001705;Name=L8R42_001705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001705 DAFVNP010000022.1 Protein Homology CDS 13730 14680 . - 0 ID=cds-HBQ7389797.1;Parent=gene-L8R42_001705;Dbxref=NCBI_GP:HBQ7389797.1;Name=HBQ7389797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=L8R42_001705;product=SDR family oxidoreductase;protein_id=HBQ7389797.1;transl_table=11 DAFVNP010000022.1 tpg gene 14720 15496 . - . ID=gene-L8R42_001706;Name=L8R42_001706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001706 DAFVNP010000022.1 Protein Homology CDS 14720 15496 . - 0 ID=cds-HBQ7389798.1;Parent=gene-L8R42_001706;Dbxref=NCBI_GP:HBQ7389798.1;Name=HBQ7389798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=L8R42_001706;product=HPr family phosphocarrier protein;protein_id=HBQ7389798.1;transl_table=11 DAFVNP010000022.1 tpg gene 15501 16139 . - . ID=gene-L8R42_001707;Name=L8R42_001707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001707 DAFVNP010000022.1 Protein Homology CDS 15501 16139 . - 0 ID=cds-HBQ7389799.1;Parent=gene-L8R42_001707;Dbxref=NCBI_GP:HBQ7389799.1;Name=HBQ7389799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=L8R42_001707;product=aldolase;protein_id=HBQ7389799.1;transl_table=11 DAFVNP010000022.1 tpg gene 16136 17398 . - . ID=gene-L8R42_001708;Name=L8R42_001708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001708 DAFVNP010000022.1 Protein Homology CDS 16136 17398 . - 0 ID=cds-HBQ7389800.1;Parent=gene-L8R42_001708;Dbxref=NCBI_GP:HBQ7389800.1;Name=HBQ7389800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=L8R42_001708;product=3-oxo-tetronate kinase;protein_id=HBQ7389800.1;transl_table=11 DAFVNP010000022.1 tpg gene 17392 18315 . - . ID=gene-L8R42_001709;Name=L8R42_001709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001709 DAFVNP010000022.1 Protein Homology CDS 17392 18315 . - 0 ID=cds-HBQ7389801.1;Parent=gene-L8R42_001709;Dbxref=NCBI_GP:HBQ7389801.1;Name=HBQ7389801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=L8R42_001709;product=NAD(P)-dependent oxidoreductase;protein_id=HBQ7389801.1;transl_table=11 DAFVNP010000022.1 tpg gene 18512 19276 . + . ID=gene-L8R42_001710;Name=L8R42_001710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001710 DAFVNP010000022.1 Protein Homology CDS 18512 19276 . + 0 ID=cds-HBQ7389802.1;Parent=gene-L8R42_001710;Dbxref=NCBI_GP:HBQ7389802.1;Name=HBQ7389802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=L8R42_001710;product=DeoR/GlpR transcriptional regulator;protein_id=HBQ7389802.1;transl_table=11 DAFVNP010000022.1 tpg gene 19295 19699 . - . ID=gene-L8R42_001711;Name=L8R42_001711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001711 DAFVNP010000022.1 Protein Homology CDS 19295 19699 . - 0 ID=cds-HBQ7389803.1;Parent=gene-L8R42_001711;Dbxref=NCBI_GP:HBQ7389803.1;Name=HBQ7389803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=L8R42_001711;product=winged helix-turn-helix transcriptional regulator;protein_id=HBQ7389803.1;transl_table=11 DAFVNP010000022.1 tpg gene 19870 20463 . + . ID=gene-L8R42_001712;Name=L8R42_001712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001712 DAFVNP010000022.1 Protein Homology CDS 19870 20463 . + 0 ID=cds-HBQ7389804.1;Parent=gene-L8R42_001712;Dbxref=NCBI_GP:HBQ7389804.1;Name=HBQ7389804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=L8R42_001712;product=UbiX family flavin prenyltransferase;protein_id=HBQ7389804.1;transl_table=11 DAFVNP010000022.1 tpg gene 20463 21890 . + . ID=gene-L8R42_001713;Name=L8R42_001713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001713 DAFVNP010000022.1 Protein Homology CDS 20463 21890 . + 0 ID=cds-HBQ7389805.1;Parent=gene-L8R42_001713;Dbxref=NCBI_GP:HBQ7389805.1;Name=HBQ7389805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=L8R42_001713;product=UbiD family decarboxylase;protein_id=HBQ7389805.1;transl_table=11 DAFVNP010000022.1 tpg gene 21901 22137 . + . ID=gene-L8R42_001714;Name=L8R42_001714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001714 DAFVNP010000022.1 Protein Homology CDS 21901 22137 . + 0 ID=cds-HBQ7389806.1;Parent=gene-L8R42_001714;Dbxref=NCBI_GP:HBQ7389806.1;Name=HBQ7389806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=L8R42_001714;product=hypothetical protein;protein_id=HBQ7389806.1;transl_table=11 DAFVNP010000022.1 tpg gene 22182 23174 . - . ID=gene-L8R42_001715;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=L8R42_001715 DAFVNP010000022.1 Protein Homology CDS 22182 23174 . - 0 ID=cds-HBQ7389807.1;Parent=gene-L8R42_001715;Dbxref=NCBI_GP:HBQ7389807.1;Name=HBQ7389807.1;gbkey=CDS;gene=rpoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=L8R42_001715;product=RNA polymerase sigma factor RpoS;protein_id=HBQ7389807.1;transl_table=11 DAFVNP010000022.1 tpg gene 23237 24370 . - . ID=gene-L8R42_001716;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=L8R42_001716 DAFVNP010000022.1 Protein Homology CDS 23237 24370 . - 0 ID=cds-HBQ7389808.1;Parent=gene-L8R42_001716;Dbxref=NCBI_GP:HBQ7389808.1;Name=HBQ7389808.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=L8R42_001716;product=murein hydrolase activator NlpD;protein_id=HBQ7389808.1;transl_table=11 DAFVNP010000022.1 tpg gene 24546 25172 . - . ID=gene-L8R42_001717;Name=L8R42_001717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001717 DAFVNP010000022.1 Protein Homology CDS 24546 25172 . - 0 ID=cds-HBQ7389809.1;Parent=gene-L8R42_001717;Dbxref=NCBI_GP:HBQ7389809.1;Name=HBQ7389809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=L8R42_001717;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=HBQ7389809.1;transl_table=11 DAFVNP010000022.1 tpg gene 25166 25927 . - . ID=gene-L8R42_001718;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=L8R42_001718 DAFVNP010000022.1 Protein Homology CDS 25166 25927 . - 0 ID=cds-HBQ7389810.1;Parent=gene-L8R42_001718;Dbxref=NCBI_GP:HBQ7389810.1;Name=HBQ7389810.1;gbkey=CDS;gene=surE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=L8R42_001718;product=5'/3'-nucleotidase SurE;protein_id=HBQ7389810.1;transl_table=11 DAFVNP010000022.1 tpg gene 25908 26957 . - . ID=gene-L8R42_001719;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=L8R42_001719 DAFVNP010000022.1 Protein Homology CDS 25908 26957 . - 0 ID=cds-HBQ7389811.1;Parent=gene-L8R42_001719;Dbxref=NCBI_GP:HBQ7389811.1;Name=HBQ7389811.1;gbkey=CDS;gene=truD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=L8R42_001719;product=tRNA pseudouridine(13) synthase TruD;protein_id=HBQ7389811.1;transl_table=11 DAFVNP010000022.1 tpg gene 26954 27433 . - . ID=gene-L8R42_001720;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=L8R42_001720 DAFVNP010000022.1 Protein Homology CDS 26954 27433 . - 0 ID=cds-HBQ7389812.1;Parent=gene-L8R42_001720;Dbxref=NCBI_GP:HBQ7389812.1;Name=HBQ7389812.1;gbkey=CDS;gene=ispF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=L8R42_001720;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=HBQ7389812.1;transl_table=11 DAFVNP010000022.1 tpg gene 27433 28143 . - . ID=gene-L8R42_001721;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=L8R42_001721 DAFVNP010000022.1 Protein Homology CDS 27433 28143 . - 0 ID=cds-HBQ7389813.1;Parent=gene-L8R42_001721;Dbxref=NCBI_GP:HBQ7389813.1;Name=HBQ7389813.1;gbkey=CDS;gene=ispD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=L8R42_001721;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=HBQ7389813.1;transl_table=11 DAFVNP010000022.1 tpg gene 28162 28473 . - . ID=gene-L8R42_001722;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=L8R42_001722 DAFVNP010000022.1 Protein Homology CDS 28162 28473 . - 0 ID=cds-HBQ7389814.1;Parent=gene-L8R42_001722;Dbxref=NCBI_GP:HBQ7389814.1;Name=HBQ7389814.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=L8R42_001722;product=cell division protein FtsB;protein_id=HBQ7389814.1;transl_table=11 DAFVNP010000022.1 tpg gene 28664 28987 . - . ID=gene-L8R42_001723;Name=L8R42_001723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001723 DAFVNP010000022.1 Protein Homology CDS 28664 28987 . - 0 ID=cds-HBQ7389815.1;Parent=gene-L8R42_001723;Dbxref=NCBI_GP:HBQ7389815.1;Name=HBQ7389815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233164.1;locus_tag=L8R42_001723;product=DUF3561 family protein;protein_id=HBQ7389815.1;transl_table=11 DAFVNP010000022.1 tpg gene 29038 29643 . - . ID=gene-L8R42_001724;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=L8R42_001724 DAFVNP010000022.1 Protein Homology CDS 29038 29643 . - 0 ID=cds-HBQ7389816.1;Parent=gene-L8R42_001724;Dbxref=NCBI_GP:HBQ7389816.1;Name=HBQ7389816.1;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=L8R42_001724;product=adenylyl-sulfate kinase;protein_id=HBQ7389816.1;transl_table=11 DAFVNP010000022.1 tpg gene 29630 31069 . - . ID=gene-L8R42_001725;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=L8R42_001725 DAFVNP010000022.1 Protein Homology CDS 29630 31069 . - 0 ID=cds-HBQ7389817.1;Parent=gene-L8R42_001725;Dbxref=NCBI_GP:HBQ7389817.1;Name=HBQ7389817.1;gbkey=CDS;gene=cysN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=L8R42_001725;product=sulfate adenylyltransferase subunit CysN;protein_id=HBQ7389817.1;transl_table=11 DAFVNP010000022.1 tpg gene 31079 31987 . - . ID=gene-L8R42_001726;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=L8R42_001726 DAFVNP010000022.1 Protein Homology CDS 31079 31987 . - 0 ID=cds-HBQ7389818.1;Parent=gene-L8R42_001726;Dbxref=NCBI_GP:HBQ7389818.1;Name=HBQ7389818.1;gbkey=CDS;gene=cysD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=L8R42_001726;product=sulfate adenylyltransferase subunit CysD;protein_id=HBQ7389818.1;transl_table=11 DAFVNP010000022.1 tpg gene 32238 33284 . + . ID=gene-L8R42_001727;Name=L8R42_001727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001727 DAFVNP010000022.1 Protein Homology CDS 32238 33284 . + 0 ID=cds-HBQ7389819.1;Parent=gene-L8R42_001727;Dbxref=NCBI_GP:HBQ7389819.1;Name=HBQ7389819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=L8R42_001727;product=aminopeptidase;protein_id=HBQ7389819.1;transl_table=11 DAFVNP010000022.1 tpg direct_repeat 33299 35279 . + . ID=id-DAFVNP010000022.1:33299..35279;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=33360..33388;rpt_unit_seq=cggtttatccccgctggcgcggggaacac DAFVNP010000022.1 tpg gene 35364 35657 . - . ID=gene-L8R42_001728;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=L8R42_001728 DAFVNP010000022.1 Protein Homology CDS 35364 35657 . - 0 ID=cds-HBQ7389820.1;Parent=gene-L8R42_001728;Dbxref=NCBI_GP:HBQ7389820.1;Name=HBQ7389820.1;gbkey=CDS;gene=cas2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062285.1;locus_tag=L8R42_001728;product=type I-E CRISPR-associated endoribonuclease Cas2;protein_id=HBQ7389820.1;transl_table=11 DAFVNP010000022.1 tpg gene 35660 36577 . - . ID=gene-L8R42_001729;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=L8R42_001729 DAFVNP010000022.1 Protein Homology CDS 35660 36577 . - 0 ID=cds-HBQ7389821.1;Parent=gene-L8R42_001729;Dbxref=NCBI_GP:HBQ7389821.1;Name=HBQ7389821.1;gbkey=CDS;gene=cas1e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417235.1;locus_tag=L8R42_001729;product=type I-E CRISPR-associated endonuclease Cas1;protein_id=HBQ7389821.1;transl_table=11 DAFVNP010000022.1 tpg gene 36577 37281 . - . ID=gene-L8R42_001730;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=L8R42_001730 DAFVNP010000022.1 Protein Homology CDS 36577 37281 . - 0 ID=cds-HBQ7389822.1;Parent=gene-L8R42_001730;Dbxref=NCBI_GP:HBQ7389822.1;Name=HBQ7389822.1;gbkey=CDS;gene=cas6e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748704.1;locus_tag=L8R42_001730;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=HBQ7389822.1;transl_table=11 DAFVNP010000022.1 tpg gene 37281 38006 . - . ID=gene-L8R42_001731;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=L8R42_001731 DAFVNP010000022.1 Protein Homology CDS 37281 38006 . - 0 ID=cds-HBQ7389823.1;Parent=gene-L8R42_001731;Dbxref=NCBI_GP:HBQ7389823.1;Name=HBQ7389823.1;gbkey=CDS;gene=cas5e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666428.1;locus_tag=L8R42_001731;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=HBQ7389823.1;transl_table=11 DAFVNP010000022.1 tpg gene 38016 39074 . - . ID=gene-L8R42_001732;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=L8R42_001732 DAFVNP010000022.1 Protein Homology CDS 38016 39074 . - 0 ID=cds-HBQ7389824.1;Parent=gene-L8R42_001732;Dbxref=NCBI_GP:HBQ7389824.1;Name=HBQ7389824.1;gbkey=CDS;gene=cas7e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804435.1;locus_tag=L8R42_001732;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=HBQ7389824.1;transl_table=11 DAFVNP010000022.1 tpg gene 39097 39699 . - . ID=gene-L8R42_001733;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=L8R42_001733 DAFVNP010000022.1 Protein Homology CDS 39097 39699 . - 0 ID=cds-HBQ7389825.1;Parent=gene-L8R42_001733;Dbxref=NCBI_GP:HBQ7389825.1;Name=HBQ7389825.1;gbkey=CDS;gene=casB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935106.1;locus_tag=L8R42_001733;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=HBQ7389825.1;transl_table=11 DAFVNP010000022.1 tpg gene 39716 41251 . - . ID=gene-L8R42_001734;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=L8R42_001734 DAFVNP010000022.1 Protein Homology CDS 39716 41251 . - 0 ID=cds-HBQ7389826.1;Parent=gene-L8R42_001734;Dbxref=NCBI_GP:HBQ7389826.1;Name=HBQ7389826.1;gbkey=CDS;gene=casA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366313.1;locus_tag=L8R42_001734;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=HBQ7389826.1;transl_table=11 DAFVNP010000022.1 tpg gene 41609 44308 . + . ID=gene-L8R42_001735;Name=L8R42_001735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001735 DAFVNP010000022.1 Protein Homology CDS 41609 44308 . + 0 ID=cds-HBQ7389827.1;Parent=gene-L8R42_001735;Dbxref=NCBI_GP:HBQ7389827.1;Name=HBQ7389827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192071.1;locus_tag=L8R42_001735;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=HBQ7389827.1;transl_table=11 DAFVNP010000022.1 tpg gene 44692 45645 . + . ID=gene-L8R42_001736;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=L8R42_001736 DAFVNP010000022.1 Protein Homology CDS 44692 45645 . + 0 ID=cds-HBQ7389828.1;Parent=gene-L8R42_001736;Dbxref=NCBI_GP:HBQ7389828.1;Name=HBQ7389828.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=L8R42_001736;product=SPI-1 type III secretion system effector SopD;protein_id=HBQ7389828.1;transl_table=11 DAFVNP010000022.1 tpg pseudogene 45733 45990 . - . ID=gene-L8R42_001737;Name=L8R42_001737;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001737;pseudo=true DAFVNP010000022.1 Protein Homology CDS 45733 45990 . - 0 ID=cds-L8R42_001737;Parent=gene-L8R42_001737;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=L8R42_001737;product=phosphoadenosine phosphosulfate reductase family protein;pseudo=true;transl_table=11 DAFVNP010000022.1 tpg gene 46223 46570 . - . ID=gene-L8R42_001738;Name=L8R42_001738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001738 DAFVNP010000022.1 GeneMarkS-2+ CDS 46223 46570 . - 0 ID=cds-HBQ7389829.1;Parent=gene-L8R42_001738;Dbxref=NCBI_GP:HBQ7389829.1;Name=HBQ7389829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_001738;product=hypothetical protein;protein_id=HBQ7389829.1;transl_table=11 DAFVNP010000022.1 tpg gene 46821 47555 . - . ID=gene-L8R42_001739;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=L8R42_001739 DAFVNP010000022.1 Protein Homology CDS 46821 47555 . - 0 ID=cds-HBQ7389830.1;Parent=gene-L8R42_001739;Dbxref=NCBI_GP:HBQ7389830.1;Name=HBQ7389830.1;gbkey=CDS;gene=cysH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=L8R42_001739;product=phosphoadenosine phosphosulfate reductase;protein_id=HBQ7389830.1;transl_table=11 DAFVNP010000022.1 tpg gene 47631 49343 . - . ID=gene-L8R42_001740;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=L8R42_001740 DAFVNP010000022.1 Protein Homology CDS 47631 49343 . - 0 ID=cds-HBQ7389831.1;Parent=gene-L8R42_001740;Dbxref=NCBI_GP:HBQ7389831.1;Name=HBQ7389831.1;gbkey=CDS;gene=cysI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=L8R42_001740;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=HBQ7389831.1;transl_table=11 DAFVNP010000022.1 tpg gene 49343 51142 . - . ID=gene-L8R42_001741;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=L8R42_001741 DAFVNP010000022.1 Protein Homology CDS 49343 51142 . - 0 ID=cds-HBQ7389832.1;Parent=gene-L8R42_001741;Dbxref=NCBI_GP:HBQ7389832.1;Name=HBQ7389832.1;gbkey=CDS;gene=cysJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=L8R42_001741;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=HBQ7389832.1;transl_table=11 DAFVNP010000022.1 tpg gene 51566 51928 . + . ID=gene-L8R42_001742;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=L8R42_001742 DAFVNP010000022.1 Protein Homology CDS 51566 51928 . + 0 ID=cds-HBQ7389833.1;Parent=gene-L8R42_001742;Dbxref=NCBI_GP:HBQ7389833.1;Name=HBQ7389833.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=L8R42_001742;product=6-carboxytetrahydropterin synthase QueD;protein_id=HBQ7389833.1;transl_table=11 DAFVNP010000022.1 tpg gene 52016 52813 . - . ID=gene-L8R42_001743;Name=L8R42_001743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001743 DAFVNP010000022.1 Protein Homology CDS 52016 52813 . - 0 ID=cds-HBQ7389834.1;Parent=gene-L8R42_001743;Dbxref=NCBI_GP:HBQ7389834.1;Name=HBQ7389834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=L8R42_001743;product=MBL fold metallo-hydrolase;protein_id=HBQ7389834.1;transl_table=11 DAFVNP010000022.1 tpg direct_repeat 52911 55014 . + . ID=id-DAFVNP010000022.1:52911..55014;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=52972..52997;rpt_unit_seq=cggtttatccccgctggcgcggggaa DAFVNP010000022.1 tpg gene 55311 55982 . - . ID=gene-L8R42_001744;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=L8R42_001744 DAFVNP010000022.1 Protein Homology CDS 55311 55982 . - 0 ID=cds-HBQ7389835.1;Parent=gene-L8R42_001744;Dbxref=NCBI_GP:HBQ7389835.1;Name=HBQ7389835.1;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=L8R42_001744;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=HBQ7389835.1;transl_table=11 DAFVNP010000022.1 tpg gene 56118 57416 . - . ID=gene-L8R42_001745;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=L8R42_001745 DAFVNP010000022.1 Protein Homology CDS 56118 57416 . - 0 ID=cds-HBQ7389836.1;Parent=gene-L8R42_001745;Dbxref=NCBI_GP:HBQ7389836.1;Name=HBQ7389836.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=L8R42_001745;product=phosphopyruvate hydratase;protein_id=HBQ7389836.1;transl_table=11 DAFVNP010000022.1 tpg gene 57499 58438 . - . ID=gene-L8R42_001746;Name=L8R42_001746;end_range=58438,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001746;partial=true DAFVNP010000022.1 Protein Homology CDS 57499 58438 . - 1 ID=cds-HBQ7389837.1;Parent=gene-L8R42_001746;Dbxref=NCBI_GP:HBQ7389837.1;Name=HBQ7389837.1;end_range=58438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=L8R42_001746;partial=true;product=CTP synthase;protein_id=HBQ7389837.1;transl_table=11 ##sequence-region DAFVNP010000023.1 1 56231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000023.1 tpg region 1 56231 . + . ID=DAFVNP010000023.1:1..56231;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000023.1 tpg gene 123 785 . + . ID=gene-L8R42_001747;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=L8R42_001747 DAFVNP010000023.1 Protein Homology CDS 123 785 . + 0 ID=cds-HBQ7389838.1;Parent=gene-L8R42_001747;Dbxref=NCBI_GP:HBQ7389838.1;Name=HBQ7389838.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=L8R42_001747;product=acrEF/envCD operon transcriptional regulator;protein_id=HBQ7389838.1;transl_table=11 DAFVNP010000023.1 tpg gene 788 2887 . - . ID=gene-L8R42_001748;Name=L8R42_001748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001748 DAFVNP010000023.1 Protein Homology CDS 788 2887 . - 0 ID=cds-HBQ7389839.1;Parent=gene-L8R42_001748;Dbxref=NCBI_GP:HBQ7389839.1;Name=HBQ7389839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=L8R42_001748;product=EAL domain-containing protein;protein_id=HBQ7389839.1;transl_table=11 DAFVNP010000023.1 tpg gene 3038 3202 . - . ID=gene-L8R42_001749;Name=L8R42_001749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001749 DAFVNP010000023.1 Protein Homology CDS 3038 3202 . - 0 ID=cds-HBQ7389840.1;Parent=gene-L8R42_001749;Dbxref=NCBI_GP:HBQ7389840.1;Name=HBQ7389840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=L8R42_001749;product=DUF2556 family protein;protein_id=HBQ7389840.1;transl_table=11 DAFVNP010000023.1 tpg gene 3285 4169 . - . ID=gene-L8R42_001750;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=L8R42_001750 DAFVNP010000023.1 Protein Homology CDS 3285 4169 . - 0 ID=cds-HBQ7389841.1;Parent=gene-L8R42_001750;Dbxref=NCBI_GP:HBQ7389841.1;Name=HBQ7389841.1;gbkey=CDS;gene=yhdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=L8R42_001750;product=adenine-specific DNA-methyltransferase;protein_id=HBQ7389841.1;transl_table=11 DAFVNP010000023.1 tpg gene 4443 5669 . + . ID=gene-L8R42_001751;Name=L8R42_001751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001751 DAFVNP010000023.1 Protein Homology CDS 4443 5669 . + 0 ID=cds-HBQ7389842.1;Parent=gene-L8R42_001751;Dbxref=NCBI_GP:HBQ7389842.1;Name=HBQ7389842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229124.1;locus_tag=L8R42_001751;product=tyrosine-type recombinase/integrase;protein_id=HBQ7389842.1;transl_table=11 DAFVNP010000023.1 tpg gene 5761 6567 . + . ID=gene-L8R42_001752;Name=L8R42_001752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001752 DAFVNP010000023.1 GeneMarkS-2+ CDS 5761 6567 . + 0 ID=cds-HBQ7389843.1;Parent=gene-L8R42_001752;Dbxref=NCBI_GP:HBQ7389843.1;Name=HBQ7389843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_001752;product=hypothetical protein;protein_id=HBQ7389843.1;transl_table=11 DAFVNP010000023.1 tpg gene 6672 6956 . + . ID=gene-L8R42_001753;Name=L8R42_001753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001753 DAFVNP010000023.1 Protein Homology CDS 6672 6956 . + 0 ID=cds-HBQ7389844.1;Parent=gene-L8R42_001753;Dbxref=NCBI_GP:HBQ7389844.1;Name=HBQ7389844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229122.1;locus_tag=L8R42_001753;product=AlpA family phage regulatory protein;protein_id=HBQ7389844.1;transl_table=11 DAFVNP010000023.1 tpg gene 6967 7746 . + . ID=gene-L8R42_001754;Name=L8R42_001754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001754 DAFVNP010000023.1 Protein Homology CDS 6967 7746 . + 0 ID=cds-HBQ7389845.1;Parent=gene-L8R42_001754;Dbxref=NCBI_GP:HBQ7389845.1;Name=HBQ7389845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177036.1;locus_tag=L8R42_001754;product=phage antirepressor KilAC domain-containing protein;protein_id=HBQ7389845.1;transl_table=11 DAFVNP010000023.1 tpg gene 7870 8064 . - . ID=gene-L8R42_001755;Name=L8R42_001755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001755 DAFVNP010000023.1 Protein Homology CDS 7870 8064 . - 0 ID=cds-HBQ7389846.1;Parent=gene-L8R42_001755;Dbxref=NCBI_GP:HBQ7389846.1;Name=HBQ7389846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001442290.1;locus_tag=L8R42_001755;product=toxin-antitoxin system HicB family antitoxin;protein_id=HBQ7389846.1;transl_table=11 DAFVNP010000023.1 tpg gene 8198 8467 . + . ID=gene-L8R42_001756;Name=L8R42_001756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001756 DAFVNP010000023.1 Protein Homology CDS 8198 8467 . + 0 ID=cds-HBQ7389847.1;Parent=gene-L8R42_001756;Dbxref=NCBI_GP:HBQ7389847.1;Name=HBQ7389847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008320689.1;locus_tag=L8R42_001756;product=host cell division inhibitor Icd-like protein;protein_id=HBQ7389847.1;transl_table=11 DAFVNP010000023.1 tpg gene 8460 8648 . + . ID=gene-L8R42_001757;Name=L8R42_001757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001757 DAFVNP010000023.1 GeneMarkS-2+ CDS 8460 8648 . + 0 ID=cds-HBQ7389848.1;Parent=gene-L8R42_001757;Dbxref=NCBI_GP:HBQ7389848.1;Name=HBQ7389848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_001757;product=hypothetical protein;protein_id=HBQ7389848.1;transl_table=11 DAFVNP010000023.1 tpg gene 8641 8955 . + . ID=gene-L8R42_001758;Name=L8R42_001758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001758 DAFVNP010000023.1 Protein Homology CDS 8641 8955 . + 0 ID=cds-HBQ7389849.1;Parent=gene-L8R42_001758;Dbxref=NCBI_GP:HBQ7389849.1;Name=HBQ7389849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150967.1;locus_tag=L8R42_001758;product=hypothetical protein;protein_id=HBQ7389849.1;transl_table=11 DAFVNP010000023.1 tpg gene 8952 9320 . + . ID=gene-L8R42_001759;Name=L8R42_001759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001759 DAFVNP010000023.1 Protein Homology CDS 8952 9320 . + 0 ID=cds-HBQ7389850.1;Parent=gene-L8R42_001759;Dbxref=NCBI_GP:HBQ7389850.1;Name=HBQ7389850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229117.1;locus_tag=L8R42_001759;product=hypothetical protein;protein_id=HBQ7389850.1;transl_table=11 DAFVNP010000023.1 tpg gene 9317 9682 . + . ID=gene-L8R42_001760;Name=L8R42_001760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001760 DAFVNP010000023.1 GeneMarkS-2+ CDS 9317 9682 . + 0 ID=cds-HBQ7389851.1;Parent=gene-L8R42_001760;Dbxref=NCBI_GP:HBQ7389851.1;Name=HBQ7389851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_001760;product=hypothetical protein;protein_id=HBQ7389851.1;transl_table=11 DAFVNP010000023.1 tpg gene 9682 11811 . + . ID=gene-L8R42_001761;Name=L8R42_001761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001761 DAFVNP010000023.1 Protein Homology CDS 9682 11811 . + 0 ID=cds-HBQ7389852.1;Parent=gene-L8R42_001761;Dbxref=NCBI_GP:HBQ7389852.1;Name=HBQ7389852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229115.1;locus_tag=L8R42_001761;product=DUF927 domain-containing protein;protein_id=HBQ7389852.1;transl_table=11 DAFVNP010000023.1 tpg gene 12157 12492 . + . ID=gene-L8R42_001762;Name=L8R42_001762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001762 DAFVNP010000023.1 Protein Homology CDS 12157 12492 . + 0 ID=cds-HBQ7389853.1;Parent=gene-L8R42_001762;Dbxref=NCBI_GP:HBQ7389853.1;Name=HBQ7389853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229114.1;locus_tag=L8R42_001762;product=hypothetical protein;protein_id=HBQ7389853.1;transl_table=11 DAFVNP010000023.1 tpg gene 12539 13051 . - . ID=gene-L8R42_001763;Name=L8R42_001763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001763 DAFVNP010000023.1 Protein Homology CDS 12539 13051 . - 0 ID=cds-HBQ7389854.1;Parent=gene-L8R42_001763;Dbxref=NCBI_GP:HBQ7389854.1;Name=HBQ7389854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229113.1;locus_tag=L8R42_001763;product=hypothetical protein;protein_id=HBQ7389854.1;transl_table=11 DAFVNP010000023.1 tpg gene 13314 14480 . + . ID=gene-L8R42_001764;Name=L8R42_001764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001764 DAFVNP010000023.1 Protein Homology CDS 13314 14480 . + 0 ID=cds-HBQ7389855.1;Parent=gene-L8R42_001764;Dbxref=NCBI_GP:HBQ7389855.1;Name=HBQ7389855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229112.1;locus_tag=L8R42_001764;product=phage major capsid protein;protein_id=HBQ7389855.1;transl_table=11 DAFVNP010000023.1 tpg gene 14532 15092 . + . ID=gene-L8R42_001765;Name=L8R42_001765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001765 DAFVNP010000023.1 Protein Homology CDS 14532 15092 . + 0 ID=cds-HBQ7389856.1;Parent=gene-L8R42_001765;Dbxref=NCBI_GP:HBQ7389856.1;Name=HBQ7389856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229111.1;locus_tag=L8R42_001765;product=HK97 family phage prohead protease;protein_id=HBQ7389856.1;transl_table=11 DAFVNP010000023.1 tpg gene 15094 16335 . + . ID=gene-L8R42_001766;Name=L8R42_001766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001766 DAFVNP010000023.1 Protein Homology CDS 15094 16335 . + 0 ID=cds-HBQ7389857.1;Parent=gene-L8R42_001766;Dbxref=NCBI_GP:HBQ7389857.1;Name=HBQ7389857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229110.1;locus_tag=L8R42_001766;product=phage portal protein;protein_id=HBQ7389857.1;transl_table=11 DAFVNP010000023.1 tpg gene 16332 16667 . + . ID=gene-L8R42_001767;Name=L8R42_001767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001767 DAFVNP010000023.1 Protein Homology CDS 16332 16667 . + 0 ID=cds-HBQ7389858.1;Parent=gene-L8R42_001767;Dbxref=NCBI_GP:HBQ7389858.1;Name=HBQ7389858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150961.1;locus_tag=L8R42_001767;product=phage head closure protein;protein_id=HBQ7389858.1;transl_table=11 DAFVNP010000023.1 tpg gene 16664 16963 . + . ID=gene-L8R42_001768;Name=L8R42_001768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001768 DAFVNP010000023.1 Protein Homology CDS 16664 16963 . + 0 ID=cds-HBQ7389859.1;Parent=gene-L8R42_001768;Dbxref=NCBI_GP:HBQ7389859.1;Name=HBQ7389859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229108.1;locus_tag=L8R42_001768;product=phage gp6-like head-tail connector protein;protein_id=HBQ7389859.1;transl_table=11 DAFVNP010000023.1 tpg gene 16963 17406 . + . ID=gene-L8R42_001769;Name=L8R42_001769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001769 DAFVNP010000023.1 Protein Homology CDS 16963 17406 . + 0 ID=cds-HBQ7389860.1;Parent=gene-L8R42_001769;Dbxref=NCBI_GP:HBQ7389860.1;Name=HBQ7389860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150959.1;locus_tag=L8R42_001769;product=HNH endonuclease;protein_id=HBQ7389860.1;transl_table=11 DAFVNP010000023.1 tpg gene 17399 17551 . + . ID=gene-L8R42_001770;Name=L8R42_001770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001770 DAFVNP010000023.1 Protein Homology CDS 17399 17551 . + 0 ID=cds-HBQ7389861.1;Parent=gene-L8R42_001770;Dbxref=NCBI_GP:HBQ7389861.1;Name=HBQ7389861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229106.1;locus_tag=L8R42_001770;product=hypothetical protein;protein_id=HBQ7389861.1;transl_table=11 DAFVNP010000023.1 tpg gene 17682 18038 . + . ID=gene-L8R42_001771;Name=L8R42_001771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001771 DAFVNP010000023.1 Protein Homology CDS 17682 18038 . + 0 ID=cds-HBQ7389862.1;Parent=gene-L8R42_001771;Dbxref=NCBI_GP:HBQ7389862.1;Name=HBQ7389862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229105.1;locus_tag=L8R42_001771;product=phage terminase small subunit P27 family;protein_id=HBQ7389862.1;transl_table=11 DAFVNP010000023.1 tpg gene 18022 19683 . + . ID=gene-L8R42_001772;Name=L8R42_001772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001772 DAFVNP010000023.1 Protein Homology CDS 18022 19683 . + 0 ID=cds-HBQ7389863.1;Parent=gene-L8R42_001772;Dbxref=NCBI_GP:HBQ7389863.1;Name=HBQ7389863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229104.1;locus_tag=L8R42_001772;product=terminase large subunit;protein_id=HBQ7389863.1;transl_table=11 DAFVNP010000023.1 tpg gene 19834 20142 . + . ID=gene-L8R42_001773;Name=L8R42_001773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001773 DAFVNP010000023.1 Protein Homology CDS 19834 20142 . + 0 ID=cds-HBQ7389864.1;Parent=gene-L8R42_001773;Dbxref=NCBI_GP:HBQ7389864.1;Name=HBQ7389864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547818.1;locus_tag=L8R42_001773;product=DUF3892 domain-containing protein;protein_id=HBQ7389864.1;transl_table=11 DAFVNP010000023.1 tpg gene 20300 20596 . - . ID=gene-L8R42_001774;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=L8R42_001774 DAFVNP010000023.1 Protein Homology CDS 20300 20596 . - 0 ID=cds-HBQ7389865.1;Parent=gene-L8R42_001774;Dbxref=NCBI_GP:HBQ7389865.1;Name=HBQ7389865.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=L8R42_001774;product=DNA-binding transcriptional regulator Fis;protein_id=HBQ7389865.1;transl_table=11 DAFVNP010000023.1 tpg gene 20622 21587 . - . ID=gene-L8R42_001775;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=L8R42_001775 DAFVNP010000023.1 Protein Homology CDS 20622 21587 . - 0 ID=cds-HBQ7389866.1;Parent=gene-L8R42_001775;Dbxref=NCBI_GP:HBQ7389866.1;Name=HBQ7389866.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=L8R42_001775;product=tRNA dihydrouridine synthase DusB;protein_id=HBQ7389866.1;transl_table=11 DAFVNP010000023.1 tpg pseudogene 21854 22117 . - . ID=gene-L8R42_001776;Name=L8R42_001776;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001776;pseudo=true DAFVNP010000023.1 Protein Homology CDS 21854 22117 . - 0 ID=cds-L8R42_001776;Parent=gene-L8R42_001776;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000771458.1;locus_tag=L8R42_001776;product=carbonic anhydrase family protein;pseudo=true;transl_table=11 DAFVNP010000023.1 tpg gene 22249 23130 . - . ID=gene-L8R42_001777;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=L8R42_001777 DAFVNP010000023.1 Protein Homology CDS 22249 23130 . - 0 ID=cds-HBQ7389867.1;Parent=gene-L8R42_001777;Dbxref=NCBI_GP:HBQ7389867.1;Name=HBQ7389867.1;gbkey=CDS;gene=prmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=L8R42_001777;product=50S ribosomal protein L11 methyltransferase;protein_id=HBQ7389867.1;transl_table=11 DAFVNP010000023.1 tpg gene 23142 24593 . - . ID=gene-L8R42_001778;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=L8R42_001778 DAFVNP010000023.1 Protein Homology CDS 23142 24593 . - 0 ID=cds-HBQ7389868.1;Parent=gene-L8R42_001778;Dbxref=NCBI_GP:HBQ7389868.1;Name=HBQ7389868.1;gbkey=CDS;gene=panF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=L8R42_001778;product=sodium/pantothenate symporter;protein_id=HBQ7389868.1;transl_table=11 DAFVNP010000023.1 tpg gene 24583 24825 . - . ID=gene-L8R42_001779;Name=L8R42_001779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001779 DAFVNP010000023.1 Protein Homology CDS 24583 24825 . - 0 ID=cds-HBQ7389869.1;Parent=gene-L8R42_001779;Dbxref=NCBI_GP:HBQ7389869.1;Name=HBQ7389869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=L8R42_001779;product=YhdT family protein;protein_id=HBQ7389869.1;transl_table=11 DAFVNP010000023.1 tpg gene 24934 26283 . - . ID=gene-L8R42_001780;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=L8R42_001780 DAFVNP010000023.1 Protein Homology CDS 24934 26283 . - 0 ID=cds-HBQ7389870.1;Parent=gene-L8R42_001780;Dbxref=NCBI_GP:HBQ7389870.1;Name=HBQ7389870.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=L8R42_001780;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=HBQ7389870.1;transl_table=11 DAFVNP010000023.1 tpg gene 26294 26764 . - . ID=gene-L8R42_001781;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;gene_synonym=fabE;locus_tag=L8R42_001781 DAFVNP010000023.1 Protein Homology CDS 26294 26764 . - 0 ID=cds-HBQ7389871.1;Parent=gene-L8R42_001781;Dbxref=NCBI_GP:HBQ7389871.1;Name=HBQ7389871.1;gbkey=CDS;gene=accB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=L8R42_001781;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=HBQ7389871.1;transl_table=11 DAFVNP010000023.1 tpg gene 27157 27756 . - . ID=gene-L8R42_001782;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=L8R42_001782 DAFVNP010000023.1 Protein Homology CDS 27157 27756 . - 0 ID=cds-HBQ7389872.1;Parent=gene-L8R42_001782;Dbxref=NCBI_GP:HBQ7389872.1;Name=HBQ7389872.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=L8R42_001782;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=HBQ7389872.1;transl_table=11 DAFVNP010000023.1 tpg gene 27757 28761 . - . ID=gene-L8R42_001783;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=L8R42_001783 DAFVNP010000023.1 Protein Homology CDS 27757 28761 . - 0 ID=cds-HBQ7389873.1;Parent=gene-L8R42_001783;Dbxref=NCBI_GP:HBQ7389873.1;Name=HBQ7389873.1;gbkey=CDS;gene=msrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=L8R42_001783;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=HBQ7389873.1;transl_table=11 DAFVNP010000023.1 tpg gene 28874 29848 . - . ID=gene-L8R42_001784;Name=L8R42_001784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001784 DAFVNP010000023.1 Protein Homology CDS 28874 29848 . - 0 ID=cds-HBQ7389874.1;Parent=gene-L8R42_001784;Dbxref=NCBI_GP:HBQ7389874.1;Name=HBQ7389874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=L8R42_001784;product=oxidoreductase;protein_id=HBQ7389874.1;transl_table=11 DAFVNP010000023.1 tpg gene 30052 31992 . + . ID=gene-L8R42_001785;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=L8R42_001785 DAFVNP010000023.1 Protein Homology CDS 30052 31992 . + 0 ID=cds-HBQ7389875.1;Parent=gene-L8R42_001785;Dbxref=NCBI_GP:HBQ7389875.1;Name=HBQ7389875.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=L8R42_001785;product=RNase E specificity factor CsrD;protein_id=HBQ7389875.1;transl_table=11 DAFVNP010000023.1 tpg gene 32300 33343 . + . ID=gene-L8R42_001786;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=L8R42_001786 DAFVNP010000023.1 Protein Homology CDS 32300 33343 . + 0 ID=cds-HBQ7389876.1;Parent=gene-L8R42_001786;Dbxref=NCBI_GP:HBQ7389876.1;Name=HBQ7389876.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=L8R42_001786;product=rod shape-determining protein MreB;protein_id=HBQ7389876.1;transl_table=11 DAFVNP010000023.1 tpg gene 33408 34460 . + . ID=gene-L8R42_001787;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=L8R42_001787 DAFVNP010000023.1 Protein Homology CDS 33408 34460 . + 0 ID=cds-HBQ7389877.1;Parent=gene-L8R42_001787;Dbxref=NCBI_GP:HBQ7389877.1;Name=HBQ7389877.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=L8R42_001787;product=rod shape-determining protein MreC;protein_id=HBQ7389877.1;transl_table=11 DAFVNP010000023.1 tpg gene 34463 34951 . + . ID=gene-L8R42_001788;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=L8R42_001788 DAFVNP010000023.1 Protein Homology CDS 34463 34951 . + 0 ID=cds-HBQ7389878.1;Parent=gene-L8R42_001788;Dbxref=NCBI_GP:HBQ7389878.1;Name=HBQ7389878.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=L8R42_001788;product=rod shape-determining protein MreD;protein_id=HBQ7389878.1;transl_table=11 DAFVNP010000023.1 tpg gene 34960 35553 . + . ID=gene-L8R42_001789;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=L8R42_001789 DAFVNP010000023.1 Protein Homology CDS 34960 35553 . + 0 ID=cds-HBQ7389879.1;Parent=gene-L8R42_001789;Dbxref=NCBI_GP:HBQ7389879.1;Name=HBQ7389879.1;gbkey=CDS;gene=maf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=L8R42_001789;product=septum formation inhibitor Maf;protein_id=HBQ7389879.1;transl_table=11 DAFVNP010000023.1 tpg gene 35543 37012 . + . ID=gene-L8R42_001790;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=L8R42_001790 DAFVNP010000023.1 Protein Homology CDS 35543 37012 . + 0 ID=cds-HBQ7389880.1;Parent=gene-L8R42_001790;Dbxref=NCBI_GP:HBQ7389880.1;Name=HBQ7389880.1;gbkey=CDS;gene=rng;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=L8R42_001790;product=ribonuclease G;protein_id=HBQ7389880.1;transl_table=11 DAFVNP010000023.1 tpg gene 37119 40919 . + . ID=gene-L8R42_001791;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=L8R42_001791 DAFVNP010000023.1 Protein Homology CDS 37119 40919 . + 0 ID=cds-HBQ7389881.1;Parent=gene-L8R42_001791;Dbxref=NCBI_GP:HBQ7389881.1;Name=HBQ7389881.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=L8R42_001791;product=AsmA2 domain-containing protein YhdP;protein_id=HBQ7389881.1;transl_table=11 DAFVNP010000023.1 tpg gene 41064 42509 . + . ID=gene-L8R42_001792;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=L8R42_001792 DAFVNP010000023.1 Protein Homology CDS 41064 42509 . + 0 ID=cds-HBQ7389882.1;Parent=gene-L8R42_001792;Dbxref=NCBI_GP:HBQ7389882.1;Name=HBQ7389882.1;gbkey=CDS;gene=tldD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=L8R42_001792;product=metalloprotease TldD;protein_id=HBQ7389882.1;transl_table=11 DAFVNP010000023.1 tpg gene 42631 43560 . - . ID=gene-L8R42_001793;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=L8R42_001793 DAFVNP010000023.1 Protein Homology CDS 42631 43560 . - 0 ID=cds-HBQ7389883.1;Parent=gene-L8R42_001793;Dbxref=NCBI_GP:HBQ7389883.1;Name=HBQ7389883.1;gbkey=CDS;gene=aaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=L8R42_001793;product=HTH-type transcriptional activator AaeR;protein_id=HBQ7389883.1;transl_table=11 DAFVNP010000023.1 tpg gene 43742 43945 . + . ID=gene-L8R42_001794;Name=L8R42_001794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001794 DAFVNP010000023.1 Protein Homology CDS 43742 43945 . + 0 ID=cds-HBQ7389884.1;Parent=gene-L8R42_001794;Dbxref=NCBI_GP:HBQ7389884.1;Name=HBQ7389884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=L8R42_001794;product=AaeX family protein;protein_id=HBQ7389884.1;transl_table=11 DAFVNP010000023.1 tpg gene 43953 44885 . + . ID=gene-L8R42_001795;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=L8R42_001795 DAFVNP010000023.1 Protein Homology CDS 43953 44885 . + 0 ID=cds-HBQ7389885.1;Parent=gene-L8R42_001795;Dbxref=NCBI_GP:HBQ7389885.1;Name=HBQ7389885.1;gbkey=CDS;gene=aaeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=L8R42_001795;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=HBQ7389885.1;transl_table=11 DAFVNP010000023.1 tpg gene 44891 46858 . + . ID=gene-L8R42_001796;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=L8R42_001796 DAFVNP010000023.1 Protein Homology CDS 44891 46858 . + 0 ID=cds-HBQ7389886.1;Parent=gene-L8R42_001796;Dbxref=NCBI_GP:HBQ7389886.1;Name=HBQ7389886.1;gbkey=CDS;gene=aaeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=L8R42_001796;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=HBQ7389886.1;transl_table=11 DAFVNP010000023.1 tpg gene 47030 47302 . + . ID=gene-L8R42_001797;Name=L8R42_001797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001797 DAFVNP010000023.1 Protein Homology CDS 47030 47302 . + 0 ID=cds-HBQ7389887.1;Parent=gene-L8R42_001797;Dbxref=NCBI_GP:HBQ7389887.1;Name=HBQ7389887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=L8R42_001797;product=hypothetical protein;protein_id=HBQ7389887.1;transl_table=11 DAFVNP010000023.1 tpg gene 47362 47628 . - . ID=gene-L8R42_001798;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=L8R42_001798 DAFVNP010000023.1 Protein Homology CDS 47362 47628 . - 0 ID=cds-HBQ7389888.1;Parent=gene-L8R42_001798;Dbxref=NCBI_GP:HBQ7389888.1;Name=HBQ7389888.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=L8R42_001798;product=peroxide/acid stress response protein YhcN;protein_id=HBQ7389888.1;transl_table=11 DAFVNP010000023.1 tpg gene 47732 47995 . - . ID=gene-L8R42_001799;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=L8R42_001799 DAFVNP010000023.1 Protein Homology CDS 47732 47995 . - 0 ID=cds-HBQ7389889.1;Parent=gene-L8R42_001799;Dbxref=NCBI_GP:HBQ7389889.1;Name=HBQ7389889.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=L8R42_001799;product=peroxide/acid stress response protein YhcN;protein_id=HBQ7389889.1;transl_table=11 DAFVNP010000023.1 tpg gene 48360 48830 . - . ID=gene-L8R42_001800;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=L8R42_001800 DAFVNP010000023.1 Protein Homology CDS 48360 48830 . - 0 ID=cds-HBQ7389890.1;Parent=gene-L8R42_001800;Dbxref=NCBI_GP:HBQ7389890.1;Name=HBQ7389890.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=L8R42_001800;product=transcriptional regulator ArgR;protein_id=HBQ7389890.1;transl_table=11 DAFVNP010000023.1 tpg gene 49245 50183 . + . ID=gene-L8R42_001801;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=L8R42_001801 DAFVNP010000023.1 Protein Homology CDS 49245 50183 . + 0 ID=cds-HBQ7389891.1;Parent=gene-L8R42_001801;Dbxref=NCBI_GP:HBQ7389891.1;Name=HBQ7389891.1;gbkey=CDS;gene=mdh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=L8R42_001801;product=malate dehydrogenase;protein_id=HBQ7389891.1;transl_table=11 DAFVNP010000023.1 tpg gene 50303 50932 . + . ID=gene-L8R42_001802;Name=L8R42_001802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001802 DAFVNP010000023.1 Protein Homology CDS 50303 50932 . + 0 ID=cds-HBQ7389892.1;Parent=gene-L8R42_001802;Dbxref=NCBI_GP:HBQ7389892.1;Name=HBQ7389892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=L8R42_001802;product=GntR family transcriptional regulator;protein_id=HBQ7389892.1;transl_table=11 DAFVNP010000023.1 tpg gene 50919 51584 . + . ID=gene-L8R42_001803;Name=L8R42_001803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001803 DAFVNP010000023.1 Protein Homology CDS 50919 51584 . + 0 ID=cds-HBQ7389893.1;Parent=gene-L8R42_001803;Dbxref=NCBI_GP:HBQ7389893.1;Name=HBQ7389893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=L8R42_001803;product=GntR family transcriptional regulator;protein_id=HBQ7389893.1;transl_table=11 DAFVNP010000023.1 tpg gene 51795 53063 . + . ID=gene-L8R42_001804;Name=L8R42_001804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001804 DAFVNP010000023.1 Protein Homology CDS 51795 53063 . + 0 ID=cds-HBQ7389894.1;Parent=gene-L8R42_001804;Dbxref=NCBI_GP:HBQ7389894.1;Name=HBQ7389894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=L8R42_001804;product=SLC13/DASS family transporter;protein_id=HBQ7389894.1;transl_table=11 DAFVNP010000023.1 tpg gene 53096 53995 . + . ID=gene-L8R42_001805;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=L8R42_001805 DAFVNP010000023.1 Protein Homology CDS 53096 53995 . + 0 ID=cds-HBQ7389895.1;Parent=gene-L8R42_001805;Dbxref=NCBI_GP:HBQ7389895.1;Name=HBQ7389895.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=L8R42_001805;product=L(+)-tartrate dehydratase subunit alpha;protein_id=HBQ7389895.1;transl_table=11 DAFVNP010000023.1 tpg gene 53995 54612 . + . ID=gene-L8R42_001806;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=L8R42_001806 DAFVNP010000023.1 Protein Homology CDS 53995 54612 . + 0 ID=cds-HBQ7389896.1;Parent=gene-L8R42_001806;Dbxref=NCBI_GP:HBQ7389896.1;Name=HBQ7389896.1;gbkey=CDS;gene=ttdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=L8R42_001806;product=L(+)-tartrate dehydratase subunit beta;protein_id=HBQ7389896.1;transl_table=11 DAFVNP010000023.1 tpg gene 54768 55010 . + . ID=gene-L8R42_001807;Name=L8R42_001807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001807 DAFVNP010000023.1 Protein Homology CDS 54768 55010 . + 0 ID=cds-HBQ7389897.1;Parent=gene-L8R42_001807;Dbxref=NCBI_GP:HBQ7389897.1;Name=HBQ7389897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128597.1;locus_tag=L8R42_001807;product=oxaloacetate decarboxylase subunit gamma;protein_id=HBQ7389897.1;transl_table=11 DAFVNP010000023.1 tpg gene 55027 56231 . + . ID=gene-L8R42_001808;Name=oadA;end_range=56231,.;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=L8R42_001808;partial=true DAFVNP010000023.1 Protein Homology CDS 55027 56231 . + 0 ID=cds-HBQ7389898.1;Parent=gene-L8R42_001808;Dbxref=NCBI_GP:HBQ7389898.1;Name=HBQ7389898.1;end_range=56231,.;gbkey=CDS;gene=oadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=L8R42_001808;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=HBQ7389898.1;transl_table=11 ##sequence-region DAFVNP010000024.1 1 55416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000024.1 tpg region 1 55416 . + . ID=DAFVNP010000024.1:1..55416;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000024.1 tpg gene 1 157 . - . ID=gene-L8R42_001809;Name=L8R42_001809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001809;partial=true;start_range=.,1 DAFVNP010000024.1 Protein Homology CDS 1 157 . - 0 ID=cds-HBQ7389899.1;Parent=gene-L8R42_001809;Dbxref=NCBI_GP:HBQ7389899.1;Name=HBQ7389899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=L8R42_001809;partial=true;product=flagellin FliC;protein_id=HBQ7389899.1;start_range=.,1;transl_table=11 DAFVNP010000024.1 tpg gene 249 821 . + . ID=gene-L8R42_001810;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=L8R42_001810 DAFVNP010000024.1 Protein Homology CDS 249 821 . + 0 ID=cds-HBQ7389900.1;Parent=gene-L8R42_001810;Dbxref=NCBI_GP:HBQ7389900.1;Name=HBQ7389900.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=L8R42_001810;product=flagellar phase variation DNA invertase Hin;protein_id=HBQ7389900.1;transl_table=11 DAFVNP010000024.1 tpg gene 1783 2898 . + . ID=gene-L8R42_001811;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=L8R42_001811 DAFVNP010000024.1 Protein Homology CDS 1783 2898 . + 0 ID=cds-HBQ7389901.1;Parent=gene-L8R42_001811;Dbxref=NCBI_GP:HBQ7389901.1;Name=HBQ7389901.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=L8R42_001811;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=HBQ7389901.1;transl_table=11 DAFVNP010000024.1 tpg gene 2979 6635 . + . ID=gene-L8R42_001812;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=L8R42_001812 DAFVNP010000024.1 Protein Homology CDS 2979 6635 . + 0 ID=cds-HBQ7389902.1;Parent=gene-L8R42_001812;Dbxref=NCBI_GP:HBQ7389902.1;Name=HBQ7389902.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=L8R42_001812;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=HBQ7389902.1;transl_table=11 DAFVNP010000024.1 tpg gene 6745 7989 . + . ID=gene-L8R42_001813;Name=L8R42_001813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001813 DAFVNP010000024.1 Protein Homology CDS 6745 7989 . + 0 ID=cds-HBQ7389903.1;Parent=gene-L8R42_001813;Dbxref=NCBI_GP:HBQ7389903.1;Name=HBQ7389903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=L8R42_001813;product=esterase family protein;protein_id=HBQ7389903.1;transl_table=11 DAFVNP010000024.1 tpg gene 8021 8956 . + . ID=gene-L8R42_001814;Name=L8R42_001814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001814 DAFVNP010000024.1 Protein Homology CDS 8021 8956 . + 0 ID=cds-HBQ7389904.1;Parent=gene-L8R42_001814;Dbxref=NCBI_GP:HBQ7389904.1;Name=HBQ7389904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=L8R42_001814;product=alpha/beta hydrolase;protein_id=HBQ7389904.1;transl_table=11 DAFVNP010000024.1 tpg gene 8998 11178 . - . ID=gene-L8R42_001815;Name=L8R42_001815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001815 DAFVNP010000024.1 Protein Homology CDS 8998 11178 . - 0 ID=cds-HBQ7389905.1;Parent=gene-L8R42_001815;Dbxref=NCBI_GP:HBQ7389905.1;Name=HBQ7389905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461704.3;locus_tag=L8R42_001815;product=TonB-dependent siderophore receptor;protein_id=HBQ7389905.1;transl_table=11 DAFVNP010000024.1 tpg gene 11703 12035 . - . ID=gene-L8R42_001816;Name=L8R42_001816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001816 DAFVNP010000024.1 Protein Homology CDS 11703 12035 . - 0 ID=cds-HBQ7389906.1;Parent=gene-L8R42_001816;Dbxref=NCBI_GP:HBQ7389906.1;Name=HBQ7389906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=L8R42_001816;product=hypothetical protein;protein_id=HBQ7389906.1;transl_table=11 DAFVNP010000024.1 tpg gene 12210 13262 . - . ID=gene-L8R42_001817;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=L8R42_001817 DAFVNP010000024.1 Protein Homology CDS 12210 13262 . - 0 ID=cds-HBQ7389907.1;Parent=gene-L8R42_001817;Dbxref=NCBI_GP:HBQ7389907.1;Name=HBQ7389907.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=L8R42_001817;product=type III secretion system effector PipB2;protein_id=HBQ7389907.1;transl_table=11 DAFVNP010000024.1 tpg gene 13780 14709 . + . ID=gene-L8R42_001818;Name=L8R42_001818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001818 DAFVNP010000024.1 Protein Homology CDS 13780 14709 . + 0 ID=cds-HBQ7389908.1;Parent=gene-L8R42_001818;Dbxref=NCBI_GP:HBQ7389908.1;Name=HBQ7389908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=L8R42_001818;product=VirK family antimicrobial peptide resistance protein;protein_id=HBQ7389908.1;transl_table=11 DAFVNP010000024.1 tpg gene 15003 15899 . + . ID=gene-L8R42_001819;Name=L8R42_001819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001819 DAFVNP010000024.1 Protein Homology CDS 15003 15899 . + 0 ID=cds-HBQ7389909.1;Parent=gene-L8R42_001819;Dbxref=NCBI_GP:HBQ7389909.1;Name=HBQ7389909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=L8R42_001819;product=antimicrobial resistance protein Mig-14;protein_id=HBQ7389909.1;transl_table=11 DAFVNP010000024.1 tpg gene 16621 17634 . - . ID=gene-L8R42_001820;Name=L8R42_001820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001820 DAFVNP010000024.1 Protein Homology CDS 16621 17634 . - 0 ID=cds-HBQ7389910.1;Parent=gene-L8R42_001820;Dbxref=NCBI_GP:HBQ7389910.1;Name=HBQ7389910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=L8R42_001820;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=HBQ7389910.1;transl_table=11 DAFVNP010000024.1 tpg gene 17767 19182 . - . ID=gene-L8R42_001821;Name=L8R42_001821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001821 DAFVNP010000024.1 Protein Homology CDS 17767 19182 . - 0 ID=cds-HBQ7389911.1;Parent=gene-L8R42_001821;Dbxref=NCBI_GP:HBQ7389911.1;Name=HBQ7389911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=L8R42_001821;product=sensor histidine kinase;protein_id=HBQ7389911.1;transl_table=11 DAFVNP010000024.1 tpg gene 19169 19843 . - . ID=gene-L8R42_001822;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=L8R42_001822 DAFVNP010000024.1 Protein Homology CDS 19169 19843 . - 0 ID=cds-HBQ7389912.1;Parent=gene-L8R42_001822;Dbxref=NCBI_GP:HBQ7389912.1;Name=HBQ7389912.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=L8R42_001822;product=transcriptional regulator TctD;protein_id=HBQ7389912.1;transl_table=11 DAFVNP010000024.1 tpg gene 19998 20975 . + . ID=gene-L8R42_001823;Name=L8R42_001823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001823 DAFVNP010000024.1 Protein Homology CDS 19998 20975 . + 0 ID=cds-HBQ7389913.1;Parent=gene-L8R42_001823;Dbxref=NCBI_GP:HBQ7389913.1;Name=HBQ7389913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=L8R42_001823;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=HBQ7389913.1;transl_table=11 DAFVNP010000024.1 tpg gene 20987 21421 . + . ID=gene-L8R42_001824;Name=L8R42_001824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001824 DAFVNP010000024.1 Protein Homology CDS 20987 21421 . + 0 ID=cds-HBQ7389914.1;Parent=gene-L8R42_001824;Dbxref=NCBI_GP:HBQ7389914.1;Name=HBQ7389914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=L8R42_001824;product=tripartite tricarboxylate transporter TctB family protein;protein_id=HBQ7389914.1;transl_table=11 DAFVNP010000024.1 tpg gene 21432 22946 . + . ID=gene-L8R42_001825;Name=L8R42_001825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001825 DAFVNP010000024.1 Protein Homology CDS 21432 22946 . + 0 ID=cds-HBQ7389915.1;Parent=gene-L8R42_001825;Dbxref=NCBI_GP:HBQ7389915.1;Name=HBQ7389915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=L8R42_001825;product=tripartite tricarboxylate transporter permease;protein_id=HBQ7389915.1;transl_table=11 DAFVNP010000024.1 tpg gene 23249 24226 . + . ID=gene-L8R42_001826;Name=csiD;gbkey=Gene;gene=csiD;gene_biotype=protein_coding;locus_tag=L8R42_001826 DAFVNP010000024.1 Protein Homology CDS 23249 24226 . + 0 ID=cds-HBQ7389916.1;Parent=gene-L8R42_001826;Dbxref=NCBI_GP:HBQ7389916.1;Name=HBQ7389916.1;gbkey=CDS;gene=csiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=L8R42_001826;product=carbon starvation induced protein CsiD;protein_id=HBQ7389916.1;transl_table=11 DAFVNP010000024.1 tpg gene 24252 25520 . + . ID=gene-L8R42_001827;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=L8R42_001827 DAFVNP010000024.1 Protein Homology CDS 24252 25520 . + 0 ID=cds-HBQ7389917.1;Parent=gene-L8R42_001827;Dbxref=NCBI_GP:HBQ7389917.1;Name=HBQ7389917.1;gbkey=CDS;gene=lhgO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=L8R42_001827;product=L-2-hydroxyglutarate oxidase;protein_id=HBQ7389917.1;transl_table=11 DAFVNP010000024.1 tpg gene 25542 26990 . + . ID=gene-L8R42_001828;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=L8R42_001828 DAFVNP010000024.1 Protein Homology CDS 25542 26990 . + 0 ID=cds-HBQ7389918.1;Parent=gene-L8R42_001828;Dbxref=NCBI_GP:HBQ7389918.1;Name=HBQ7389918.1;gbkey=CDS;gene=gabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=L8R42_001828;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=HBQ7389918.1;transl_table=11 DAFVNP010000024.1 tpg gene 27005 28288 . + . ID=gene-L8R42_001829;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=L8R42_001829 DAFVNP010000024.1 Protein Homology CDS 27005 28288 . + 0 ID=cds-HBQ7389919.1;Parent=gene-L8R42_001829;Dbxref=NCBI_GP:HBQ7389919.1;Name=HBQ7389919.1;gbkey=CDS;gene=gabT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=L8R42_001829;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=HBQ7389919.1;transl_table=11 DAFVNP010000024.1 tpg gene 28418 29818 . + . ID=gene-L8R42_001830;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=L8R42_001830 DAFVNP010000024.1 Protein Homology CDS 28418 29818 . + 0 ID=cds-HBQ7389920.1;Parent=gene-L8R42_001830;Dbxref=NCBI_GP:HBQ7389920.1;Name=HBQ7389920.1;gbkey=CDS;gene=gabP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=L8R42_001830;product=GABA permease;protein_id=HBQ7389920.1;transl_table=11 DAFVNP010000024.1 tpg gene 29860 30537 . + . ID=gene-L8R42_001831;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=L8R42_001831 DAFVNP010000024.1 Protein Homology CDS 29860 30537 . + 0 ID=cds-HBQ7389921.1;Parent=gene-L8R42_001831;Dbxref=NCBI_GP:HBQ7389921.1;Name=HBQ7389921.1;gbkey=CDS;gene=csiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=L8R42_001831;product=DNA-binding transcriptional regulator CsiR;protein_id=HBQ7389921.1;transl_table=11 DAFVNP010000024.1 tpg gene 30559 31008 . - . ID=gene-L8R42_001832;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=L8R42_001832 DAFVNP010000024.1 Protein Homology CDS 30559 31008 . - 0 ID=cds-HBQ7389922.1;Parent=gene-L8R42_001832;Dbxref=NCBI_GP:HBQ7389922.1;Name=HBQ7389922.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=L8R42_001832;product=peptidoglycan-binding protein LysM;protein_id=HBQ7389922.1;transl_table=11 DAFVNP010000024.1 tpg gene 31108 31266 . - . ID=gene-L8R42_001833;Name=L8R42_001833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001833 DAFVNP010000024.1 Protein Homology CDS 31108 31266 . - 0 ID=cds-HBQ7389923.1;Parent=gene-L8R42_001833;Dbxref=NCBI_GP:HBQ7389923.1;Name=HBQ7389923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=L8R42_001833;product=YqaE/Pmp3 family membrane protein;protein_id=HBQ7389923.1;transl_table=11 DAFVNP010000024.1 tpg gene 31449 31748 . + . ID=gene-L8R42_001834;Name=L8R42_001834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001834 DAFVNP010000024.1 Protein Homology CDS 31449 31748 . + 0 ID=cds-HBQ7389924.1;Parent=gene-L8R42_001834;Dbxref=NCBI_GP:HBQ7389924.1;Name=HBQ7389924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=L8R42_001834;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7389924.1;transl_table=11 DAFVNP010000024.1 tpg gene 31758 32285 . + . ID=gene-L8R42_001835;Name=L8R42_001835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001835 DAFVNP010000024.1 Protein Homology CDS 31758 32285 . + 0 ID=cds-HBQ7389925.1;Parent=gene-L8R42_001835;Dbxref=NCBI_GP:HBQ7389925.1;Name=HBQ7389925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=L8R42_001835;product=rhodanese family protein;protein_id=HBQ7389925.1;transl_table=11 DAFVNP010000024.1 tpg gene 32364 32543 . + . ID=gene-L8R42_001836;Name=L8R42_001836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001836 DAFVNP010000024.1 Protein Homology CDS 32364 32543 . + 0 ID=cds-HBQ7389926.1;Parent=gene-L8R42_001836;Dbxref=NCBI_GP:HBQ7389926.1;Name=HBQ7389926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=L8R42_001836;product=hypothetical protein;protein_id=HBQ7389926.1;transl_table=11 DAFVNP010000024.1 tpg gene 32633 33034 . - . ID=gene-L8R42_001837;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=L8R42_001837 DAFVNP010000024.1 Protein Homology CDS 32633 33034 . - 0 ID=cds-HBQ7389927.1;Parent=gene-L8R42_001837;Dbxref=NCBI_GP:HBQ7389927.1;Name=HBQ7389927.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=L8R42_001837;product=DNA-binding protein StpA;protein_id=HBQ7389927.1;transl_table=11 DAFVNP010000024.1 tpg gene 33934 34383 . + . ID=gene-L8R42_001838;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=L8R42_001838 DAFVNP010000024.1 Protein Homology CDS 33934 34383 . + 0 ID=cds-HBQ7389928.1;Parent=gene-L8R42_001838;Dbxref=NCBI_GP:HBQ7389928.1;Name=HBQ7389928.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=L8R42_001838;product=L-alanine exporter AlaE;protein_id=HBQ7389928.1;transl_table=11 DAFVNP010000024.1 tpg gene 34418 34768 . - . ID=gene-L8R42_001839;Name=L8R42_001839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001839 DAFVNP010000024.1 Protein Homology CDS 34418 34768 . - 0 ID=cds-HBQ7389929.1;Parent=gene-L8R42_001839;Dbxref=NCBI_GP:HBQ7389929.1;Name=HBQ7389929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=L8R42_001839;product=YgaC family protein;protein_id=HBQ7389929.1;transl_table=11 DAFVNP010000024.1 tpg gene 34930 35256 . + . ID=gene-L8R42_001840;Name=L8R42_001840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001840 DAFVNP010000024.1 Protein Homology CDS 34930 35256 . + 0 ID=cds-HBQ7389930.1;Parent=gene-L8R42_001840;Dbxref=NCBI_GP:HBQ7389930.1;Name=HBQ7389930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=L8R42_001840;product=DUF883 domain-containing protein;protein_id=HBQ7389930.1;transl_table=11 DAFVNP010000024.1 tpg gene 35344 36678 . - . ID=gene-L8R42_001841;Name=L8R42_001841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001841 DAFVNP010000024.1 Protein Homology CDS 35344 36678 . - 0 ID=cds-HBQ7389931.1;Parent=gene-L8R42_001841;Dbxref=NCBI_GP:HBQ7389931.1;Name=HBQ7389931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=L8R42_001841;product=PLP-dependent aminotransferase family protein;protein_id=HBQ7389931.1;transl_table=11 DAFVNP010000024.1 tpg gene 36767 37198 . + . ID=gene-L8R42_001842;Name=L8R42_001842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001842 DAFVNP010000024.1 Protein Homology CDS 36767 37198 . + 0 ID=cds-HBQ7389932.1;Parent=gene-L8R42_001842;Dbxref=NCBI_GP:HBQ7389932.1;Name=HBQ7389932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=L8R42_001842;product=carboxymuconolactone decarboxylase family protein;protein_id=HBQ7389932.1;transl_table=11 DAFVNP010000024.1 tpg gene 37470 37715 . + . ID=gene-L8R42_001843;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=L8R42_001843 DAFVNP010000024.1 Protein Homology CDS 37470 37715 . + 0 ID=cds-HBQ7389933.1;Parent=gene-L8R42_001843;Dbxref=NCBI_GP:HBQ7389933.1;Name=HBQ7389933.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=L8R42_001843;product=glutaredoxin-like protein NrdH;protein_id=HBQ7389933.1;transl_table=11 DAFVNP010000024.1 tpg gene 37712 38122 . + . ID=gene-L8R42_001844;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=L8R42_001844 DAFVNP010000024.1 Protein Homology CDS 37712 38122 . + 0 ID=cds-HBQ7389934.1;Parent=gene-L8R42_001844;Dbxref=NCBI_GP:HBQ7389934.1;Name=HBQ7389934.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=L8R42_001844;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=HBQ7389934.1;transl_table=11 DAFVNP010000024.1 tpg gene 38095 40239 . + . ID=gene-L8R42_001845;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=L8R42_001845 DAFVNP010000024.1 Protein Homology CDS 38095 40239 . + 0 ID=cds-HBQ7389935.1;Parent=gene-L8R42_001845;Dbxref=NCBI_GP:HBQ7389935.1;Name=HBQ7389935.1;gbkey=CDS;gene=nrdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=L8R42_001845;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=HBQ7389935.1;transl_table=11 DAFVNP010000024.1 tpg gene 40250 41209 . + . ID=gene-L8R42_001846;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=L8R42_001846 DAFVNP010000024.1 Protein Homology CDS 40250 41209 . + 0 ID=cds-HBQ7389936.1;Parent=gene-L8R42_001846;Dbxref=NCBI_GP:HBQ7389936.1;Name=HBQ7389936.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=L8R42_001846;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=HBQ7389936.1;transl_table=11 DAFVNP010000024.1 tpg gene 41564 42766 . + . ID=gene-L8R42_001847;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=L8R42_001847 DAFVNP010000024.1 Protein Homology CDS 41564 42766 . + 0 ID=cds-HBQ7389937.1;Parent=gene-L8R42_001847;Dbxref=NCBI_GP:HBQ7389937.1;Name=HBQ7389937.1;gbkey=CDS;gene=proV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=L8R42_001847;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=HBQ7389937.1;transl_table=11 DAFVNP010000024.1 tpg gene 42759 43823 . + . ID=gene-L8R42_001848;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=L8R42_001848 DAFVNP010000024.1 Protein Homology CDS 42759 43823 . + 0 ID=cds-HBQ7389938.1;Parent=gene-L8R42_001848;Dbxref=NCBI_GP:HBQ7389938.1;Name=HBQ7389938.1;gbkey=CDS;gene=proW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=L8R42_001848;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=HBQ7389938.1;transl_table=11 DAFVNP010000024.1 tpg gene 43893 44888 . + . ID=gene-L8R42_001849;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=L8R42_001849 DAFVNP010000024.1 Protein Homology CDS 43893 44888 . + 0 ID=cds-HBQ7389939.1;Parent=gene-L8R42_001849;Dbxref=NCBI_GP:HBQ7389939.1;Name=HBQ7389939.1;gbkey=CDS;gene=proX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=L8R42_001849;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=HBQ7389939.1;transl_table=11 DAFVNP010000024.1 tpg gene 45053 46237 . + . ID=gene-L8R42_001850;Name=L8R42_001850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001850 DAFVNP010000024.1 Protein Homology CDS 45053 46237 . + 0 ID=cds-HBQ7389940.1;Parent=gene-L8R42_001850;Dbxref=NCBI_GP:HBQ7389940.1;Name=HBQ7389940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=L8R42_001850;product=MFS transporter;protein_id=HBQ7389940.1;transl_table=11 DAFVNP010000024.1 tpg gene 46734 47264 . + . ID=gene-L8R42_001851;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=L8R42_001851 DAFVNP010000024.1 Protein Homology CDS 46734 47264 . + 0 ID=cds-HBQ7389941.1;Parent=gene-L8R42_001851;Dbxref=NCBI_GP:HBQ7389941.1;Name=HBQ7389941.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=L8R42_001851;product=transcriptional repressor MprA;protein_id=HBQ7389941.1;transl_table=11 DAFVNP010000024.1 tpg gene 47391 48563 . + . ID=gene-L8R42_001852;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=L8R42_001852 DAFVNP010000024.1 Protein Homology CDS 47391 48563 . + 0 ID=cds-HBQ7389942.1;Parent=gene-L8R42_001852;Dbxref=NCBI_GP:HBQ7389942.1;Name=HBQ7389942.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=L8R42_001852;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=HBQ7389942.1;transl_table=11 DAFVNP010000024.1 tpg gene 48580 50118 . + . ID=gene-L8R42_001853;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=L8R42_001853 DAFVNP010000024.1 Protein Homology CDS 48580 50118 . + 0 ID=cds-HBQ7389943.1;Parent=gene-L8R42_001853;Dbxref=NCBI_GP:HBQ7389943.1;Name=HBQ7389943.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=L8R42_001853;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=HBQ7389943.1;transl_table=11 DAFVNP010000024.1 tpg gene 50167 51537 . - . ID=gene-L8R42_001854;Name=L8R42_001854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001854 DAFVNP010000024.1 Protein Homology CDS 50167 51537 . - 0 ID=cds-HBQ7389944.1;Parent=gene-L8R42_001854;Dbxref=NCBI_GP:HBQ7389944.1;Name=HBQ7389944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=L8R42_001854;product=carbohydrate porin;protein_id=HBQ7389944.1;transl_table=11 DAFVNP010000024.1 tpg gene 51883 52398 . - . ID=gene-L8R42_001855;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=L8R42_001855 DAFVNP010000024.1 Protein Homology CDS 51883 52398 . - 0 ID=cds-HBQ7389945.1;Parent=gene-L8R42_001855;Dbxref=NCBI_GP:HBQ7389945.1;Name=HBQ7389945.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=L8R42_001855;product=S-ribosylhomocysteine lyase;protein_id=HBQ7389945.1;transl_table=11 DAFVNP010000024.1 tpg gene 52548 54104 . - . ID=gene-L8R42_001856;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=L8R42_001856 DAFVNP010000024.1 Protein Homology CDS 52548 54104 . - 0 ID=cds-HBQ7389946.1;Parent=gene-L8R42_001856;Dbxref=NCBI_GP:HBQ7389946.1;Name=HBQ7389946.1;gbkey=CDS;gene=gshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=L8R42_001856;product=glutamate--cysteine ligase;protein_id=HBQ7389946.1;transl_table=11 DAFVNP010000024.1 tpg gene 54181 54606 . - . ID=gene-L8R42_001857;Name=L8R42_001857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001857 DAFVNP010000024.1 Protein Homology CDS 54181 54606 . - 0 ID=cds-HBQ7389947.1;Parent=gene-L8R42_001857;Dbxref=NCBI_GP:HBQ7389947.1;Name=HBQ7389947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=L8R42_001857;product=DedA family protein;protein_id=HBQ7389947.1;transl_table=11 DAFVNP010000024.1 tpg gene 54603 55169 . - . ID=gene-L8R42_001858;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=L8R42_001858 DAFVNP010000024.1 Protein Homology CDS 54603 55169 . - 0 ID=cds-HBQ7389948.1;Parent=gene-L8R42_001858;Dbxref=NCBI_GP:HBQ7389948.1;Name=HBQ7389948.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=L8R42_001858;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=HBQ7389948.1;transl_table=11 ##sequence-region DAFVNP010000025.1 1 55238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000025.1 tpg region 1 55238 . + . ID=DAFVNP010000025.1:1..55238;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000025.1 tpg gene 71 1369 . - . ID=gene-L8R42_001859;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=L8R42_001859 DAFVNP010000025.1 Protein Homology CDS 71 1369 . - 0 ID=cds-HBQ7389949.1;Parent=gene-L8R42_001859;Dbxref=NCBI_GP:HBQ7389949.1;Name=HBQ7389949.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=L8R42_001859;product=penicillin binding protein PBP4B;protein_id=HBQ7389949.1;transl_table=11 DAFVNP010000025.1 tpg gene 1573 2148 . + . ID=gene-L8R42_001860;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=L8R42_001860 DAFVNP010000025.1 Protein Homology CDS 1573 2148 . + 0 ID=cds-HBQ7389950.1;Parent=gene-L8R42_001860;Dbxref=NCBI_GP:HBQ7389950.1;Name=HBQ7389950.1;gbkey=CDS;gene=nudK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=L8R42_001860;product=GDP-mannose pyrophosphatase NudK;protein_id=HBQ7389950.1;transl_table=11 DAFVNP010000025.1 tpg gene 2273 3316 . + . ID=gene-L8R42_001861;Name=L8R42_001861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001861 DAFVNP010000025.1 Protein Homology CDS 2273 3316 . + 0 ID=cds-HBQ7389951.1;Parent=gene-L8R42_001861;Dbxref=NCBI_GP:HBQ7389951.1;Name=HBQ7389951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=L8R42_001861;product=DUF1176 domain-containing protein;protein_id=HBQ7389951.1;transl_table=11 DAFVNP010000025.1 tpg gene 3444 3674 . + . ID=gene-L8R42_001862;Name=L8R42_001862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001862 DAFVNP010000025.1 Protein Homology CDS 3444 3674 . + 0 ID=cds-HBQ7389952.1;Parent=gene-L8R42_001862;Dbxref=NCBI_GP:HBQ7389952.1;Name=HBQ7389952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=L8R42_001862;product=hypothetical protein;protein_id=HBQ7389952.1;transl_table=11 DAFVNP010000025.1 tpg gene 3737 5737 . - . ID=gene-L8R42_001863;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=L8R42_001863 DAFVNP010000025.1 Protein Homology CDS 3737 5737 . - 0 ID=cds-HBQ7389953.1;Parent=gene-L8R42_001863;Dbxref=NCBI_GP:HBQ7389953.1;Name=HBQ7389953.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=L8R42_001863;product=transketolase;protein_id=HBQ7389953.1;transl_table=11 DAFVNP010000025.1 tpg gene 5757 6707 . - . ID=gene-L8R42_001864;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=L8R42_001864 DAFVNP010000025.1 Protein Homology CDS 5757 6707 . - 0 ID=cds-HBQ7389954.1;Parent=gene-L8R42_001864;Dbxref=NCBI_GP:HBQ7389954.1;Name=HBQ7389954.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=L8R42_001864;product=transaldolase;protein_id=HBQ7389954.1;transl_table=11 DAFVNP010000025.1 tpg gene 6979 9258 . + . ID=gene-L8R42_001865;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=L8R42_001865 DAFVNP010000025.1 Protein Homology CDS 6979 9258 . + 0 ID=cds-HBQ7389955.1;Parent=gene-L8R42_001865;Dbxref=NCBI_GP:HBQ7389955.1;Name=HBQ7389955.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=L8R42_001865;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=HBQ7389955.1;transl_table=11 DAFVNP010000025.1 tpg gene 9675 10010 . + . ID=gene-L8R42_001866;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=L8R42_001866 DAFVNP010000025.1 Protein Homology CDS 9675 10010 . + 0 ID=cds-HBQ7389956.1;Parent=gene-L8R42_001866;Dbxref=NCBI_GP:HBQ7389956.1;Name=HBQ7389956.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=L8R42_001866;product=ethanolamine utilization microcompartment protein EutS;protein_id=HBQ7389956.1;transl_table=11 DAFVNP010000025.1 tpg gene 10023 10502 . + . ID=gene-L8R42_001867;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=L8R42_001867 DAFVNP010000025.1 Protein Homology CDS 10023 10502 . + 0 ID=cds-HBQ7389957.1;Parent=gene-L8R42_001867;Dbxref=NCBI_GP:HBQ7389957.1;Name=HBQ7389957.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=L8R42_001867;product=ethanolamine utilization acetate kinase EutP;protein_id=HBQ7389957.1;transl_table=11 DAFVNP010000025.1 tpg gene 10480 11169 . + . ID=gene-L8R42_001868;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=L8R42_001868 DAFVNP010000025.1 Protein Homology CDS 10480 11169 . + 0 ID=cds-HBQ7389958.1;Parent=gene-L8R42_001868;Dbxref=NCBI_GP:HBQ7389958.1;Name=HBQ7389958.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=L8R42_001868;product=ethanolamine utilization acetate kinase EutQ;protein_id=HBQ7389958.1;transl_table=11 DAFVNP010000025.1 tpg gene 11166 11969 . + . ID=gene-L8R42_001869;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=L8R42_001869 DAFVNP010000025.1 Protein Homology CDS 11166 11969 . + 0 ID=cds-HBQ7389959.1;Parent=gene-L8R42_001869;Dbxref=NCBI_GP:HBQ7389959.1;Name=HBQ7389959.1;gbkey=CDS;gene=eutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=L8R42_001869;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=HBQ7389959.1;transl_table=11 DAFVNP010000025.1 tpg gene 11966 12982 . + . ID=gene-L8R42_001870;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=L8R42_001870 DAFVNP010000025.1 Protein Homology CDS 11966 12982 . + 0 ID=cds-HBQ7389960.1;Parent=gene-L8R42_001870;Dbxref=NCBI_GP:HBQ7389960.1;Name=HBQ7389960.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=L8R42_001870;product=phosphate acetyltransferase;protein_id=HBQ7389960.1;transl_table=11 DAFVNP010000025.1 tpg gene 13023 13313 . + . ID=gene-L8R42_001871;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=L8R42_001871 DAFVNP010000025.1 Protein Homology CDS 13023 13313 . + 0 ID=cds-HBQ7389961.1;Parent=gene-L8R42_001871;Dbxref=NCBI_GP:HBQ7389961.1;Name=HBQ7389961.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=L8R42_001871;product=ethanolamine utilization microcompartment protein EutM;protein_id=HBQ7389961.1;transl_table=11 DAFVNP010000025.1 tpg gene 13426 13713 . + . ID=gene-L8R42_001872;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=L8R42_001872 DAFVNP010000025.1 Protein Homology CDS 13426 13713 . + 0 ID=cds-HBQ7389962.1;Parent=gene-L8R42_001872;Dbxref=NCBI_GP:HBQ7389962.1;Name=HBQ7389962.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=L8R42_001872;product=ethanolamine utilization microcompartment protein EutN;protein_id=HBQ7389962.1;transl_table=11 DAFVNP010000025.1 tpg gene 13725 15128 . + . ID=gene-L8R42_001873;Name=L8R42_001873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001873 DAFVNP010000025.1 Protein Homology CDS 13725 15128 . + 0 ID=cds-HBQ7389963.1;Parent=gene-L8R42_001873;Dbxref=NCBI_GP:HBQ7389963.1;Name=HBQ7389963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=L8R42_001873;product=aldehyde dehydrogenase EutE;protein_id=HBQ7389963.1;transl_table=11 DAFVNP010000025.1 tpg gene 15139 15978 . + . ID=gene-L8R42_001874;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=L8R42_001874 DAFVNP010000025.1 Protein Homology CDS 15139 15978 . + 0 ID=cds-HBQ7389964.1;Parent=gene-L8R42_001874;Dbxref=NCBI_GP:HBQ7389964.1;Name=HBQ7389964.1;gbkey=CDS;gene=eutJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=L8R42_001874;product=ethanolamine utilization protein EutJ;protein_id=HBQ7389964.1;transl_table=11 DAFVNP010000025.1 tpg gene 15968 17155 . + . ID=gene-L8R42_001875;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=L8R42_001875 DAFVNP010000025.1 Protein Homology CDS 15968 17155 . + 0 ID=cds-HBQ7389965.1;Parent=gene-L8R42_001875;Dbxref=NCBI_GP:HBQ7389965.1;Name=HBQ7389965.1;gbkey=CDS;gene=eutG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=L8R42_001875;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=HBQ7389965.1;transl_table=11 DAFVNP010000025.1 tpg gene 17275 18501 . + . ID=gene-L8R42_001876;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=L8R42_001876 DAFVNP010000025.1 Protein Homology CDS 17275 18501 . + 0 ID=cds-HBQ7389966.1;Parent=gene-L8R42_001876;Dbxref=NCBI_GP:HBQ7389966.1;Name=HBQ7389966.1;gbkey=CDS;gene=eutH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=L8R42_001876;product=ethanolamine utilization protein EutH;protein_id=HBQ7389966.1;transl_table=11 DAFVNP010000025.1 tpg gene 18498 19901 . + . ID=gene-L8R42_001877;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=L8R42_001877 DAFVNP010000025.1 Protein Homology CDS 18498 19901 . + 0 ID=cds-HBQ7389967.1;Parent=gene-L8R42_001877;Dbxref=NCBI_GP:HBQ7389967.1;Name=HBQ7389967.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=L8R42_001877;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=HBQ7389967.1;transl_table=11 DAFVNP010000025.1 tpg gene 19913 21274 . + . ID=gene-L8R42_001878;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=L8R42_001878 DAFVNP010000025.1 Protein Homology CDS 19913 21274 . + 0 ID=cds-HBQ7389968.1;Parent=gene-L8R42_001878;Dbxref=NCBI_GP:HBQ7389968.1;Name=HBQ7389968.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=L8R42_001878;product=ethanolamine ammonia-lyase subunit alpha;protein_id=HBQ7389968.1;transl_table=11 DAFVNP010000025.1 tpg gene 21293 22189 . + . ID=gene-L8R42_001879;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=L8R42_001879 DAFVNP010000025.1 Protein Homology CDS 21293 22189 . + 0 ID=cds-HBQ7389969.1;Parent=gene-L8R42_001879;Dbxref=NCBI_GP:HBQ7389969.1;Name=HBQ7389969.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=L8R42_001879;product=ethanolamine ammonia-lyase subunit EutC;protein_id=HBQ7389969.1;transl_table=11 DAFVNP010000025.1 tpg gene 22199 22858 . + . ID=gene-L8R42_001880;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=L8R42_001880 DAFVNP010000025.1 Protein Homology CDS 22199 22858 . + 0 ID=cds-HBQ7389970.1;Parent=gene-L8R42_001880;Dbxref=NCBI_GP:HBQ7389970.1;Name=HBQ7389970.1;gbkey=CDS;gene=eutL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=L8R42_001880;product=ethanolamine utilization microcompartment protein EutL;protein_id=HBQ7389970.1;transl_table=11 DAFVNP010000025.1 tpg gene 22871 23365 . + . ID=gene-L8R42_001881;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=L8R42_001881 DAFVNP010000025.1 Protein Homology CDS 22871 23365 . + 0 ID=cds-HBQ7389971.1;Parent=gene-L8R42_001881;Dbxref=NCBI_GP:HBQ7389971.1;Name=HBQ7389971.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=L8R42_001881;product=ethanolamine utilization microcompartment protein EutK;protein_id=HBQ7389971.1;transl_table=11 DAFVNP010000025.1 tpg gene 23413 24465 . + . ID=gene-L8R42_001882;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=L8R42_001882 DAFVNP010000025.1 Protein Homology CDS 23413 24465 . + 0 ID=cds-HBQ7389972.1;Parent=gene-L8R42_001882;Dbxref=NCBI_GP:HBQ7389972.1;Name=HBQ7389972.1;gbkey=CDS;gene=eutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=L8R42_001882;product=HTH-type transcriptional regulator EutR;protein_id=HBQ7389972.1;transl_table=11 DAFVNP010000025.1 tpg pseudogene 24632 24859 . - . ID=gene-L8R42_001883;Name=L8R42_001883;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001883;pseudo=true DAFVNP010000025.1 Protein Homology CDS 24632 24859 . - 0 ID=cds-L8R42_001883;Parent=gene-L8R42_001883;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=L8R42_001883;product=DUF1963 domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000025.1 tpg gene 24914 25243 . - . ID=gene-L8R42_001884;Name=L8R42_001884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001884 DAFVNP010000025.1 Protein Homology CDS 24914 25243 . - 0 ID=cds-HBQ7389973.1;Parent=gene-L8R42_001884;Dbxref=NCBI_GP:HBQ7389973.1;Name=HBQ7389973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=L8R42_001884;product=hypothetical protein;protein_id=HBQ7389973.1;transl_table=11 DAFVNP010000025.1 tpg gene 25264 26163 . - . ID=gene-L8R42_001885;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=L8R42_001885 DAFVNP010000025.1 Protein Homology CDS 25264 26163 . - 0 ID=cds-HBQ7389974.1;Parent=gene-L8R42_001885;Dbxref=NCBI_GP:HBQ7389974.1;Name=HBQ7389974.1;gbkey=CDS;gene=hemF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=L8R42_001885;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=HBQ7389974.1;transl_table=11 DAFVNP010000025.1 tpg gene 26166 27035 . - . ID=gene-L8R42_001886;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=L8R42_001886 DAFVNP010000025.1 Protein Homology CDS 26166 27035 . - 0 ID=cds-HBQ7389975.1;Parent=gene-L8R42_001886;Dbxref=NCBI_GP:HBQ7389975.1;Name=HBQ7389975.1;gbkey=CDS;gene=amiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=L8R42_001886;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=HBQ7389975.1;transl_table=11 DAFVNP010000025.1 tpg gene 27248 27673 . + . ID=gene-L8R42_001887;Name=L8R42_001887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001887 DAFVNP010000025.1 Protein Homology CDS 27248 27673 . + 0 ID=cds-HBQ7389976.1;Parent=gene-L8R42_001887;Dbxref=NCBI_GP:HBQ7389976.1;Name=HBQ7389976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=L8R42_001887;product=GNAT family acetyltransferase;protein_id=HBQ7389976.1;transl_table=11 DAFVNP010000025.1 tpg gene 27660 28109 . + . ID=gene-L8R42_001888;Name=L8R42_001888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001888 DAFVNP010000025.1 Protein Homology CDS 27660 28109 . + 0 ID=cds-HBQ7389977.1;Parent=gene-L8R42_001888;Dbxref=NCBI_GP:HBQ7389977.1;Name=HBQ7389977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=L8R42_001888;product=DUF2919 domain-containing protein;protein_id=HBQ7389977.1;transl_table=11 DAFVNP010000025.1 tpg gene 28171 28746 . + . ID=gene-L8R42_001889;Name=L8R42_001889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001889 DAFVNP010000025.1 Protein Homology CDS 28171 28746 . + 0 ID=cds-HBQ7389978.1;Parent=gene-L8R42_001889;Dbxref=NCBI_GP:HBQ7389978.1;Name=HBQ7389978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=L8R42_001889;product=RpoE-regulated lipoprotein;protein_id=HBQ7389978.1;transl_table=11 DAFVNP010000025.1 tpg gene 28841 29740 . + . ID=gene-L8R42_001890;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=L8R42_001890 DAFVNP010000025.1 Protein Homology CDS 28841 29740 . + 0 ID=cds-HBQ7389979.1;Parent=gene-L8R42_001890;Dbxref=NCBI_GP:HBQ7389979.1;Name=HBQ7389979.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=L8R42_001890;product=porphyrinogen peroxidase;protein_id=HBQ7389979.1;transl_table=11 DAFVNP010000025.1 tpg gene 29978 30769 . + . ID=gene-L8R42_001891;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=L8R42_001891 DAFVNP010000025.1 Protein Homology CDS 29978 30769 . + 0 ID=cds-HBQ7389980.1;Parent=gene-L8R42_001891;Dbxref=NCBI_GP:HBQ7389980.1;Name=HBQ7389980.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=L8R42_001891;product=SDR family oxidoreductase UcpA;protein_id=HBQ7389980.1;transl_table=11 DAFVNP010000025.1 tpg gene 30927 31943 . + . ID=gene-L8R42_001892;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=L8R42_001892 DAFVNP010000025.1 Protein Homology CDS 30927 31943 . + 0 ID=cds-HBQ7389981.1;Parent=gene-L8R42_001892;Dbxref=NCBI_GP:HBQ7389981.1;Name=HBQ7389981.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=L8R42_001892;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=HBQ7389981.1;transl_table=11 DAFVNP010000025.1 tpg gene 31943 32776 . + . ID=gene-L8R42_001893;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=L8R42_001893 DAFVNP010000025.1 Protein Homology CDS 31943 32776 . + 0 ID=cds-HBQ7389982.1;Parent=gene-L8R42_001893;Dbxref=NCBI_GP:HBQ7389982.1;Name=HBQ7389982.1;gbkey=CDS;gene=cysT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=L8R42_001893;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=HBQ7389982.1;transl_table=11 DAFVNP010000025.1 tpg gene 32776 33651 . + . ID=gene-L8R42_001894;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=L8R42_001894 DAFVNP010000025.1 Protein Homology CDS 32776 33651 . + 0 ID=cds-HBQ7389983.1;Parent=gene-L8R42_001894;Dbxref=NCBI_GP:HBQ7389983.1;Name=HBQ7389983.1;gbkey=CDS;gene=cysW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=L8R42_001894;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=HBQ7389983.1;transl_table=11 DAFVNP010000025.1 tpg gene 33641 34738 . + . ID=gene-L8R42_001895;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=L8R42_001895 DAFVNP010000025.1 Protein Homology CDS 33641 34738 . + 0 ID=cds-HBQ7389984.1;Parent=gene-L8R42_001895;Dbxref=NCBI_GP:HBQ7389984.1;Name=HBQ7389984.1;gbkey=CDS;gene=cysA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=L8R42_001895;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=HBQ7389984.1;transl_table=11 DAFVNP010000025.1 tpg gene 34859 35770 . + . ID=gene-L8R42_001896;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=L8R42_001896 DAFVNP010000025.1 Protein Homology CDS 34859 35770 . + 0 ID=cds-HBQ7389985.1;Parent=gene-L8R42_001896;Dbxref=NCBI_GP:HBQ7389985.1;Name=HBQ7389985.1;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=L8R42_001896;product=cysteine synthase CysM;protein_id=HBQ7389985.1;transl_table=11 DAFVNP010000025.1 tpg gene 35901 36440 . - . ID=gene-L8R42_001897;Name=L8R42_001897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001897 DAFVNP010000025.1 Protein Homology CDS 35901 36440 . - 0 ID=cds-HBQ7389986.1;Parent=gene-L8R42_001897;Dbxref=NCBI_GP:HBQ7389986.1;Name=HBQ7389986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461374.1;locus_tag=L8R42_001897;product=transglycosylase domain-containing protein;protein_id=HBQ7389986.1;transl_table=11 DAFVNP010000025.1 tpg gene 36453 36833 . - . ID=gene-L8R42_001898;Name=L8R42_001898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001898 DAFVNP010000025.1 Protein Homology CDS 36453 36833 . - 0 ID=cds-HBQ7389987.1;Parent=gene-L8R42_001898;Dbxref=NCBI_GP:HBQ7389987.1;Name=HBQ7389987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461373.2;locus_tag=L8R42_001898;product=YfeK family protein;protein_id=HBQ7389987.1;transl_table=11 DAFVNP010000025.1 tpg gene 36892 37611 . - . ID=gene-L8R42_001899;Name=L8R42_001899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001899 DAFVNP010000025.1 Protein Homology CDS 36892 37611 . - 0 ID=cds-HBQ7389988.1;Parent=gene-L8R42_001899;Dbxref=NCBI_GP:HBQ7389988.1;Name=HBQ7389988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=L8R42_001899;product=GMP synthase;protein_id=HBQ7389988.1;transl_table=11 DAFVNP010000025.1 tpg gene 37626 38918 . - . ID=gene-L8R42_001900;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=L8R42_001900 DAFVNP010000025.1 Protein Homology CDS 37626 38918 . - 0 ID=cds-HBQ7389989.1;Parent=gene-L8R42_001900;Dbxref=NCBI_GP:HBQ7389989.1;Name=HBQ7389989.1;gbkey=CDS;gene=ptsJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=L8R42_001900;product=transcriptional regulator PtsJ;protein_id=HBQ7389989.1;transl_table=11 DAFVNP010000025.1 tpg gene 39001 39867 . + . ID=gene-L8R42_001901;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=L8R42_001901 DAFVNP010000025.1 Protein Homology CDS 39001 39867 . + 0 ID=cds-HBQ7389990.1;Parent=gene-L8R42_001901;Dbxref=NCBI_GP:HBQ7389990.1;Name=HBQ7389990.1;gbkey=CDS;gene=pdxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=L8R42_001901;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=HBQ7389990.1;transl_table=11 DAFVNP010000025.1 tpg gene 39864 40103 . + . ID=gene-L8R42_001902;Name=L8R42_001902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001902 DAFVNP010000025.1 Protein Homology CDS 39864 40103 . + 0 ID=cds-HBQ7389991.1;Parent=gene-L8R42_001902;Dbxref=NCBI_GP:HBQ7389991.1;Name=HBQ7389991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=L8R42_001902;product=cytoplasmic protein;protein_id=HBQ7389991.1;transl_table=11 DAFVNP010000025.1 tpg gene 40253 40762 . - . ID=gene-L8R42_001903;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=L8R42_001903 DAFVNP010000025.1 Protein Homology CDS 40253 40762 . - 0 ID=cds-HBQ7389992.1;Parent=gene-L8R42_001903;Dbxref=NCBI_GP:HBQ7389992.1;Name=HBQ7389992.1;gbkey=CDS;gene=crr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=L8R42_001903;product=PTS glucose transporter subunit IIA;protein_id=HBQ7389992.1;transl_table=11 DAFVNP010000025.1 tpg gene 40803 42530 . - . ID=gene-L8R42_001904;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=L8R42_001904 DAFVNP010000025.1 Protein Homology CDS 40803 42530 . - 0 ID=cds-HBQ7389993.1;Parent=gene-L8R42_001904;Dbxref=NCBI_GP:HBQ7389993.1;Name=HBQ7389993.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=L8R42_001904;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=HBQ7389993.1;transl_table=11 DAFVNP010000025.1 tpg gene 42578 42835 . - . ID=gene-L8R42_001905;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=L8R42_001905 DAFVNP010000025.1 Protein Homology CDS 42578 42835 . - 0 ID=cds-HBQ7389994.1;Parent=gene-L8R42_001905;Dbxref=NCBI_GP:HBQ7389994.1;Name=HBQ7389994.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=L8R42_001905;product=phosphocarrier protein Hpr;protein_id=HBQ7389994.1;transl_table=11 DAFVNP010000025.1 tpg gene 43219 44190 . - . ID=gene-L8R42_001906;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=L8R42_001906 DAFVNP010000025.1 Protein Homology CDS 43219 44190 . - 0 ID=cds-HBQ7389995.1;Parent=gene-L8R42_001906;Dbxref=NCBI_GP:HBQ7389995.1;Name=HBQ7389995.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=L8R42_001906;product=cysteine synthase A;protein_id=HBQ7389995.1;transl_table=11 DAFVNP010000025.1 tpg gene 44354 45115 . - . ID=gene-L8R42_001907;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=L8R42_001907 DAFVNP010000025.1 Protein Homology CDS 44354 45115 . - 0 ID=cds-HBQ7389996.1;Parent=gene-L8R42_001907;Dbxref=NCBI_GP:HBQ7389996.1;Name=HBQ7389996.1;gbkey=CDS;gene=cysZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=L8R42_001907;product=sulfate transporter CysZ;protein_id=HBQ7389996.1;transl_table=11 DAFVNP010000025.1 tpg gene 45347 46333 . + . ID=gene-L8R42_001908;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=L8R42_001908 DAFVNP010000025.1 Protein Homology CDS 45347 46333 . + 0 ID=cds-HBQ7389997.1;Parent=gene-L8R42_001908;Dbxref=NCBI_GP:HBQ7389997.1;Name=HBQ7389997.1;gbkey=CDS;gene=zipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=L8R42_001908;product=cell division protein ZipA;protein_id=HBQ7389997.1;transl_table=11 DAFVNP010000025.1 tpg gene 46405 48420 . + . ID=gene-L8R42_001909;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=L8R42_001909 DAFVNP010000025.1 Protein Homology CDS 46405 48420 . + 0 ID=cds-HBQ7389998.1;Parent=gene-L8R42_001909;Dbxref=NCBI_GP:HBQ7389998.1;Name=HBQ7389998.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=L8R42_001909;product=NAD-dependent DNA ligase LigA;protein_id=HBQ7389998.1;transl_table=11 DAFVNP010000025.1 tpg gene 48422 48640 . + . ID=gene-L8R42_001910;Name=L8R42_001910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001910 DAFVNP010000025.1 Protein Homology CDS 48422 48640 . + 0 ID=cds-HBQ7389999.1;Parent=gene-L8R42_001910;Dbxref=NCBI_GP:HBQ7389999.1;Name=HBQ7389999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=L8R42_001910;product=DUF3820 family protein;protein_id=HBQ7389999.1;transl_table=11 DAFVNP010000025.1 tpg gene 48637 49635 . - . ID=gene-L8R42_001911;Name=L8R42_001911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001911 DAFVNP010000025.1 Protein Homology CDS 48637 49635 . - 0 ID=cds-HBQ7390000.1;Parent=gene-L8R42_001911;Dbxref=NCBI_GP:HBQ7390000.1;Name=HBQ7390000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=L8R42_001911;product=bile acid:sodium symporter;protein_id=HBQ7390000.1;transl_table=11 DAFVNP010000025.1 tpg gene 49725 50651 . + . ID=gene-L8R42_001912;Name=L8R42_001912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001912 DAFVNP010000025.1 Protein Homology CDS 49725 50651 . + 0 ID=cds-HBQ7390001.1;Parent=gene-L8R42_001912;Dbxref=NCBI_GP:HBQ7390001.1;Name=HBQ7390001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=L8R42_001912;product=LysR family transcriptional regulator;protein_id=HBQ7390001.1;transl_table=11 DAFVNP010000025.1 tpg gene 50713 51474 . - . ID=gene-L8R42_001913;Name=L8R42_001913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001913 DAFVNP010000025.1 Protein Homology CDS 50713 51474 . - 0 ID=cds-HBQ7390002.1;Parent=gene-L8R42_001913;Dbxref=NCBI_GP:HBQ7390002.1;Name=HBQ7390002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=L8R42_001913;product=outer membrane protein;protein_id=HBQ7390002.1;transl_table=11 DAFVNP010000025.1 tpg gene 51730 52563 . + . ID=gene-L8R42_001914;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=L8R42_001914 DAFVNP010000025.1 Protein Homology CDS 51730 52563 . + 0 ID=cds-HBQ7390003.1;Parent=gene-L8R42_001914;Dbxref=NCBI_GP:HBQ7390003.1;Name=HBQ7390003.1;gbkey=CDS;gene=xapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=L8R42_001914;product=xanthosine phosphorylase;protein_id=HBQ7390003.1;transl_table=11 DAFVNP010000025.1 tpg gene 52618 53874 . + . ID=gene-L8R42_001915;Name=L8R42_001915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001915 DAFVNP010000025.1 Protein Homology CDS 52618 53874 . + 0 ID=cds-HBQ7390004.1;Parent=gene-L8R42_001915;Dbxref=NCBI_GP:HBQ7390004.1;Name=HBQ7390004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=L8R42_001915;product=nucleoside permease;protein_id=HBQ7390004.1;transl_table=11 DAFVNP010000025.1 tpg gene 53933 54091 . + . ID=gene-L8R42_001916;Name=L8R42_001916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001916 DAFVNP010000025.1 Protein Homology CDS 53933 54091 . + 0 ID=cds-HBQ7390005.1;Parent=gene-L8R42_001916;Dbxref=NCBI_GP:HBQ7390005.1;Name=HBQ7390005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=L8R42_001916;product=DUF1427 family protein;protein_id=HBQ7390005.1;transl_table=11 DAFVNP010000025.1 tpg gene 54143 55027 . + . ID=gene-L8R42_001917;Name=L8R42_001917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001917 DAFVNP010000025.1 Protein Homology CDS 54143 55027 . + 0 ID=cds-HBQ7390006.1;Parent=gene-L8R42_001917;Dbxref=NCBI_GP:HBQ7390006.1;Name=HBQ7390006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=L8R42_001917;product=LysR family transcriptional regulator;protein_id=HBQ7390006.1;transl_table=11 ##sequence-region DAFVNP010000026.1 1 52852 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000026.1 tpg region 1 52852 . + . ID=DAFVNP010000026.1:1..52852;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000026.1 tpg gene 1 500 . + . ID=gene-L8R42_001918;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=L8R42_001918;partial=true;start_range=.,1 DAFVNP010000026.1 Protein Homology CDS 1 500 . + 2 ID=cds-HBQ7390007.1;Parent=gene-L8R42_001918;Dbxref=NCBI_GP:HBQ7390007.1;Name=HBQ7390007.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=L8R42_001918;partial=true;product=molecular chaperone LpfB;protein_id=HBQ7390007.1;start_range=.,1;transl_table=11 DAFVNP010000026.1 tpg gene 523 3051 . + . ID=gene-L8R42_001919;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=protein_coding;locus_tag=L8R42_001919 DAFVNP010000026.1 Protein Homology CDS 523 3051 . + 0 ID=cds-HBQ7390008.1;Parent=gene-L8R42_001919;Dbxref=NCBI_GP:HBQ7390008.1;Name=HBQ7390008.1;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=L8R42_001919;product=outer membrane usher protein LpfC;protein_id=HBQ7390008.1;transl_table=11 DAFVNP010000026.1 tpg gene 3069 4148 . + . ID=gene-L8R42_001920;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=L8R42_001920 DAFVNP010000026.1 Protein Homology CDS 3069 4148 . + 0 ID=cds-HBQ7390009.1;Parent=gene-L8R42_001920;Dbxref=NCBI_GP:HBQ7390009.1;Name=HBQ7390009.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=L8R42_001920;product=long polar fimbrial protein LpfD;protein_id=HBQ7390009.1;transl_table=11 DAFVNP010000026.1 tpg gene 4154 4681 . + . ID=gene-L8R42_001921;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=L8R42_001921 DAFVNP010000026.1 Protein Homology CDS 4154 4681 . + 0 ID=cds-HBQ7390010.1;Parent=gene-L8R42_001921;Dbxref=NCBI_GP:HBQ7390010.1;Name=HBQ7390010.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=L8R42_001921;product=long polar fimbrial protein LpfE;protein_id=HBQ7390010.1;transl_table=11 DAFVNP010000026.1 tpg gene 4899 6590 . + . ID=gene-L8R42_001922;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=L8R42_001922 DAFVNP010000026.1 Protein Homology CDS 4899 6590 . + 0 ID=cds-HBQ7390011.1;Parent=gene-L8R42_001922;Dbxref=NCBI_GP:HBQ7390011.1;Name=HBQ7390011.1;gbkey=CDS;gene=eptB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=L8R42_001922;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=HBQ7390011.1;transl_table=11 DAFVNP010000026.1 tpg gene 6681 6757 . + . ID=gene-L8R42_001923;Name=L8R42_001923;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_001923 DAFVNP010000026.1 tRNAscan-SE tRNA 6681 6757 . + . ID=rna-L8R42_001923;Parent=gene-L8R42_001923;anticodon=(pos:6715..6717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001923;product=tRNA-Pro DAFVNP010000026.1 tRNAscan-SE exon 6681 6757 . + . ID=exon-L8R42_001923-1;Parent=rna-L8R42_001923;anticodon=(pos:6715..6717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_001923;product=tRNA-Pro DAFVNP010000026.1 tpg gene 6792 6925 . + . ID=gene-L8R42_001924;Name=L8R42_001924;gbkey=Gene;gene_biotype=ncRNA;locus_tag=L8R42_001924 DAFVNP010000026.1 cmsearch ncRNA 6792 6925 . + . ID=rna-L8R42_001924;Parent=gene-L8R42_001924;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_001924;product=RtT sRNA DAFVNP010000026.1 cmsearch exon 6792 6925 . + . ID=exon-L8R42_001924-1;Parent=rna-L8R42_001924;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_001924;product=RtT sRNA DAFVNP010000026.1 tpg gene 6961 7094 . + . ID=gene-L8R42_001925;Name=L8R42_001925;gbkey=Gene;gene_biotype=ncRNA;locus_tag=L8R42_001925 DAFVNP010000026.1 cmsearch ncRNA 6961 7094 . + . ID=rna-L8R42_001925;Parent=gene-L8R42_001925;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_001925;product=RtT sRNA DAFVNP010000026.1 cmsearch exon 6961 7094 . + . ID=exon-L8R42_001925-1;Parent=rna-L8R42_001925;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_001925;product=RtT sRNA DAFVNP010000026.1 tpg gene 7085 8092 . - . ID=gene-L8R42_001926;Name=L8R42_001926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001926 DAFVNP010000026.1 Protein Homology CDS 7085 8092 . - 0 ID=cds-HBQ7390012.1;Parent=gene-L8R42_001926;Dbxref=NCBI_GP:HBQ7390012.1;Name=HBQ7390012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=L8R42_001926;product=substrate-binding domain-containing protein;protein_id=HBQ7390012.1;transl_table=11 DAFVNP010000026.1 tpg gene 8242 9366 . + . ID=gene-L8R42_001927;Name=L8R42_001927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001927 DAFVNP010000026.1 Protein Homology CDS 8242 9366 . + 0 ID=cds-HBQ7390013.1;Parent=gene-L8R42_001927;Dbxref=NCBI_GP:HBQ7390013.1;Name=HBQ7390013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=L8R42_001927;product=aryl-sulfate sulfotransferase;protein_id=HBQ7390013.1;transl_table=11 DAFVNP010000026.1 tpg gene 9424 10749 . + . ID=gene-L8R42_001928;Name=L8R42_001928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001928 DAFVNP010000026.1 Protein Homology CDS 9424 10749 . + 0 ID=cds-HBQ7390014.1;Parent=gene-L8R42_001928;Dbxref=NCBI_GP:HBQ7390014.1;Name=HBQ7390014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=L8R42_001928;product=uracil-xanthine permease;protein_id=HBQ7390014.1;transl_table=11 DAFVNP010000026.1 tpg gene 11305 12912 . + . ID=gene-L8R42_001929;Name=L8R42_001929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001929 DAFVNP010000026.1 Protein Homology CDS 11305 12912 . + 0 ID=cds-HBQ7390015.1;Parent=gene-L8R42_001929;Dbxref=NCBI_GP:HBQ7390015.1;Name=HBQ7390015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=L8R42_001929;product=ABC transporter substrate-binding protein;protein_id=HBQ7390015.1;transl_table=11 DAFVNP010000026.1 tpg gene 13069 14088 . + . ID=gene-L8R42_001930;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=L8R42_001930 DAFVNP010000026.1 Protein Homology CDS 13069 14088 . + 0 ID=cds-HBQ7390016.1;Parent=gene-L8R42_001930;Dbxref=NCBI_GP:HBQ7390016.1;Name=HBQ7390016.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=L8R42_001930;product=dipeptide ABC transporter permease DppB;protein_id=HBQ7390016.1;transl_table=11 DAFVNP010000026.1 tpg gene 14098 15000 . + . ID=gene-L8R42_001931;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=L8R42_001931 DAFVNP010000026.1 Protein Homology CDS 14098 15000 . + 0 ID=cds-HBQ7390017.1;Parent=gene-L8R42_001931;Dbxref=NCBI_GP:HBQ7390017.1;Name=HBQ7390017.1;gbkey=CDS;gene=dppC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=L8R42_001931;product=dipeptide ABC transporter permease DppC;protein_id=HBQ7390017.1;transl_table=11 DAFVNP010000026.1 tpg gene 15011 15994 . + . ID=gene-L8R42_001932;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=L8R42_001932 DAFVNP010000026.1 Protein Homology CDS 15011 15994 . + 0 ID=cds-HBQ7390018.1;Parent=gene-L8R42_001932;Dbxref=NCBI_GP:HBQ7390018.1;Name=HBQ7390018.1;gbkey=CDS;gene=dppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=L8R42_001932;product=dipeptide ABC transporter ATP-binding protein;protein_id=HBQ7390018.1;transl_table=11 DAFVNP010000026.1 tpg gene 15991 17004 . + . ID=gene-L8R42_001933;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=L8R42_001933 DAFVNP010000026.1 Protein Homology CDS 15991 17004 . + 0 ID=cds-HBQ7390019.1;Parent=gene-L8R42_001933;Dbxref=NCBI_GP:HBQ7390019.1;Name=HBQ7390019.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=L8R42_001933;product=dipeptide ABC transporter ATP binding subunit DppF;protein_id=HBQ7390019.1;transl_table=11 DAFVNP010000026.1 tpg gene 17105 18403 . - . ID=gene-L8R42_001934;Name=L8R42_001934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001934 DAFVNP010000026.1 Protein Homology CDS 17105 18403 . - 0 ID=cds-HBQ7390020.1;Parent=gene-L8R42_001934;Dbxref=NCBI_GP:HBQ7390020.1;Name=HBQ7390020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=L8R42_001934;product=transporter;protein_id=HBQ7390020.1;transl_table=11 DAFVNP010000026.1 tpg pseudogene 18521 18918 . - . ID=gene-L8R42_001935;Name=L8R42_001935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_001935;pseudo=true DAFVNP010000026.1 Protein Homology CDS 18521 18918 . - 0 ID=cds-L8R42_001935;Parent=gene-L8R42_001935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133841.1;locus_tag=L8R42_001935;product=PLP-dependent transferase;pseudo=true;transl_table=11 DAFVNP010000026.1 tpg gene 19046 19153 . + . ID=gene-L8R42_001936;Name=L8R42_001936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001936 DAFVNP010000026.1 Protein Homology CDS 19046 19153 . + 0 ID=cds-HBQ7390021.1;Parent=gene-L8R42_001936;Dbxref=NCBI_GP:HBQ7390021.1;Name=HBQ7390021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=L8R42_001936;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=HBQ7390021.1;transl_table=11 DAFVNP010000026.1 tpg gene 19235 20914 . - . ID=gene-L8R42_001937;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=L8R42_001937 DAFVNP010000026.1 Protein Homology CDS 19235 20914 . - 0 ID=cds-HBQ7390022.1;Parent=gene-L8R42_001937;Dbxref=NCBI_GP:HBQ7390022.1;Name=HBQ7390022.1;gbkey=CDS;gene=bcsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=L8R42_001937;product=cellulose biosynthesis protein BcsG;protein_id=HBQ7390022.1;transl_table=11 DAFVNP010000026.1 tpg gene 20911 21102 . - . ID=gene-L8R42_001938;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=L8R42_001938 DAFVNP010000026.1 Protein Homology CDS 20911 21102 . - 0 ID=cds-HBQ7390023.1;Parent=gene-L8R42_001938;Dbxref=NCBI_GP:HBQ7390023.1;Name=HBQ7390023.1;gbkey=CDS;gene=bcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=L8R42_001938;product=cellulose biosynthesis protein BcsF;protein_id=HBQ7390023.1;transl_table=11 DAFVNP010000026.1 tpg gene 21099 22670 . - . ID=gene-L8R42_001939;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=L8R42_001939 DAFVNP010000026.1 Protein Homology CDS 21099 22670 . - 0 ID=cds-HBQ7390024.1;Parent=gene-L8R42_001939;Dbxref=NCBI_GP:HBQ7390024.1;Name=HBQ7390024.1;gbkey=CDS;gene=bcsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=L8R42_001939;product=cellulose biosynthesis protein BcsE;protein_id=HBQ7390024.1;transl_table=11 DAFVNP010000026.1 tpg gene 22915 23118 . + . ID=gene-L8R42_001940;Name=L8R42_001940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001940 DAFVNP010000026.1 Protein Homology CDS 22915 23118 . + 0 ID=cds-HBQ7390025.1;Parent=gene-L8R42_001940;Dbxref=NCBI_GP:HBQ7390025.1;Name=HBQ7390025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=L8R42_001940;product=YhjR family protein;protein_id=HBQ7390025.1;transl_table=11 DAFVNP010000026.1 tpg gene 23119 23871 . + . ID=gene-L8R42_001941;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=L8R42_001941 DAFVNP010000026.1 Protein Homology CDS 23119 23871 . + 0 ID=cds-HBQ7390026.1;Parent=gene-L8R42_001941;Dbxref=NCBI_GP:HBQ7390026.1;Name=HBQ7390026.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=L8R42_001941;product=cellulose biosynthesis protein BcsQ;protein_id=HBQ7390026.1;transl_table=11 DAFVNP010000026.1 tpg gene 23868 26492 . + . ID=gene-L8R42_001942;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=L8R42_001942 DAFVNP010000026.1 Protein Homology CDS 23868 26492 . + 0 ID=cds-HBQ7390027.1;Parent=gene-L8R42_001942;Dbxref=NCBI_GP:HBQ7390027.1;Name=HBQ7390027.1;gbkey=CDS;gene=bcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=L8R42_001942;product=UDP-forming cellulose synthase catalytic subunit;protein_id=HBQ7390027.1;transl_table=11 DAFVNP010000026.1 tpg gene 26503 28803 . + . ID=gene-L8R42_001943;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=L8R42_001943 DAFVNP010000026.1 Protein Homology CDS 26503 28803 . + 0 ID=cds-HBQ7390028.1;Parent=gene-L8R42_001943;Dbxref=NCBI_GP:HBQ7390028.1;Name=HBQ7390028.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=L8R42_001943;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=HBQ7390028.1;transl_table=11 DAFVNP010000026.1 tpg gene 28807 29916 . + . ID=gene-L8R42_001944;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=L8R42_001944 DAFVNP010000026.1 Protein Homology CDS 28807 29916 . + 0 ID=cds-HBQ7390029.1;Parent=gene-L8R42_001944;Dbxref=NCBI_GP:HBQ7390029.1;Name=HBQ7390029.1;gbkey=CDS;gene=bcsZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=L8R42_001944;product=cellulase;protein_id=HBQ7390029.1;transl_table=11 DAFVNP010000026.1 tpg gene 29898 33440 . + . ID=gene-L8R42_001945;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=L8R42_001945 DAFVNP010000026.1 Protein Homology CDS 29898 33440 . + 0 ID=cds-HBQ7390030.1;Parent=gene-L8R42_001945;Dbxref=NCBI_GP:HBQ7390030.1;Name=HBQ7390030.1;gbkey=CDS;gene=bcsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=L8R42_001945;product=cellulose biosynthesis protein BcsC;protein_id=HBQ7390030.1;transl_table=11 DAFVNP010000026.1 tpg gene 33614 35620 . + . ID=gene-L8R42_001946;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=L8R42_001946 DAFVNP010000026.1 Protein Homology CDS 33614 35620 . + 0 ID=cds-HBQ7390031.1;Parent=gene-L8R42_001946;Dbxref=NCBI_GP:HBQ7390031.1;Name=HBQ7390031.1;gbkey=CDS;gene=hmsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=L8R42_001946;product=biofilm formation regulator HmsP;protein_id=HBQ7390031.1;transl_table=11 DAFVNP010000026.1 tpg gene 35778 37064 . + . ID=gene-L8R42_001947;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=L8R42_001947 DAFVNP010000026.1 Protein Homology CDS 35778 37064 . + 0 ID=cds-HBQ7390032.1;Parent=gene-L8R42_001947;Dbxref=NCBI_GP:HBQ7390032.1;Name=HBQ7390032.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=L8R42_001947;product=C4-dicarboxylate transporter DctC;protein_id=HBQ7390032.1;transl_table=11 DAFVNP010000026.1 tpg gene 37284 38771 . + . ID=gene-L8R42_001948;Name=L8R42_001948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001948 DAFVNP010000026.1 Protein Homology CDS 37284 38771 . + 0 ID=cds-HBQ7390033.1;Parent=gene-L8R42_001948;Dbxref=NCBI_GP:HBQ7390033.1;Name=HBQ7390033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=L8R42_001948;product=insulinase family protein;protein_id=HBQ7390033.1;transl_table=11 DAFVNP010000026.1 tpg gene 38825 39754 . - . ID=gene-L8R42_001949;Name=L8R42_001949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001949 DAFVNP010000026.1 Protein Homology CDS 38825 39754 . - 0 ID=cds-HBQ7390034.1;Parent=gene-L8R42_001949;Dbxref=NCBI_GP:HBQ7390034.1;Name=HBQ7390034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=L8R42_001949;product=sugar kinase;protein_id=HBQ7390034.1;transl_table=11 DAFVNP010000026.1 tpg gene 39983 40750 . + . ID=gene-L8R42_001950;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=L8R42_001950 DAFVNP010000026.1 Protein Homology CDS 39983 40750 . + 0 ID=cds-HBQ7390035.1;Parent=gene-L8R42_001950;Dbxref=NCBI_GP:HBQ7390035.1;Name=HBQ7390035.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=L8R42_001950;product=cyclic-guanylate-specific phosphodiesterase;protein_id=HBQ7390035.1;transl_table=11 DAFVNP010000026.1 tpg gene 40860 42920 . + . ID=gene-L8R42_001951;Name=L8R42_001951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001951 DAFVNP010000026.1 Protein Homology CDS 40860 42920 . + 0 ID=cds-HBQ7390036.1;Parent=gene-L8R42_001951;Dbxref=NCBI_GP:HBQ7390036.1;Name=HBQ7390036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=L8R42_001951;product=AsmA family protein;protein_id=HBQ7390036.1;transl_table=11 DAFVNP010000026.1 tpg gene 42960 44282 . - . ID=gene-L8R42_001952;Name=L8R42_001952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001952 DAFVNP010000026.1 Protein Homology CDS 42960 44282 . - 0 ID=cds-HBQ7390037.1;Parent=gene-L8R42_001952;Dbxref=NCBI_GP:HBQ7390037.1;Name=HBQ7390037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=L8R42_001952;product=MHS family MFS transporter;protein_id=HBQ7390037.1;transl_table=11 DAFVNP010000026.1 tpg gene 44633 45661 . - . ID=gene-L8R42_001953;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=L8R42_001953 DAFVNP010000026.1 Protein Homology CDS 44633 45661 . - 0 ID=cds-HBQ7390038.1;Parent=gene-L8R42_001953;Dbxref=NCBI_GP:HBQ7390038.1;Name=HBQ7390038.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=L8R42_001953;product=inner membrane protein YhjD;protein_id=HBQ7390038.1;transl_table=11 DAFVNP010000026.1 tpg gene 45734 46633 . - . ID=gene-L8R42_001954;Name=L8R42_001954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001954 DAFVNP010000026.1 Protein Homology CDS 45734 46633 . - 0 ID=cds-HBQ7390039.1;Parent=gene-L8R42_001954;Dbxref=NCBI_GP:HBQ7390039.1;Name=HBQ7390039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=L8R42_001954;product=LysR family transcriptional regulator;protein_id=HBQ7390039.1;transl_table=11 DAFVNP010000026.1 tpg gene 47264 47866 . + . ID=gene-L8R42_001955;Name=L8R42_001955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001955 DAFVNP010000026.1 Protein Homology CDS 47264 47866 . + 0 ID=cds-HBQ7390040.1;Parent=gene-L8R42_001955;Dbxref=NCBI_GP:HBQ7390040.1;Name=HBQ7390040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=L8R42_001955;product=response regulator transcription factor;protein_id=HBQ7390040.1;transl_table=11 DAFVNP010000026.1 tpg gene 47872 48228 . - . ID=gene-L8R42_001956;Name=L8R42_001956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001956 DAFVNP010000026.1 Protein Homology CDS 47872 48228 . - 0 ID=cds-HBQ7390041.1;Parent=gene-L8R42_001956;Dbxref=NCBI_GP:HBQ7390041.1;Name=HBQ7390041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=L8R42_001956;product=lysozyme;protein_id=HBQ7390041.1;transl_table=11 DAFVNP010000026.1 tpg gene 48509 50098 . + . ID=gene-L8R42_001957;Name=L8R42_001957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001957 DAFVNP010000026.1 Protein Homology CDS 48509 50098 . + 0 ID=cds-HBQ7390042.1;Parent=gene-L8R42_001957;Dbxref=NCBI_GP:HBQ7390042.1;Name=HBQ7390042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=L8R42_001957;product=hypothetical protein;protein_id=HBQ7390042.1;transl_table=11 DAFVNP010000026.1 tpg gene 50111 51760 . - . ID=gene-L8R42_001958;Name=L8R42_001958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001958 DAFVNP010000026.1 Protein Homology CDS 50111 51760 . - 0 ID=cds-HBQ7390043.1;Parent=gene-L8R42_001958;Dbxref=NCBI_GP:HBQ7390043.1;Name=HBQ7390043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=L8R42_001958;product=alpha%2Calpha-trehalase;protein_id=HBQ7390043.1;transl_table=11 DAFVNP010000026.1 tpg gene 52086 52805 . + . ID=gene-L8R42_001959;Name=L8R42_001959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001959 DAFVNP010000026.1 Protein Homology CDS 52086 52805 . + 0 ID=cds-HBQ7390044.1;Parent=gene-L8R42_001959;Dbxref=NCBI_GP:HBQ7390044.1;Name=HBQ7390044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=L8R42_001959;product=GntR family transcriptional regulator;protein_id=HBQ7390044.1;transl_table=11 ##sequence-region DAFVNP010000027.1 1 52586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000027.1 tpg region 1 52586 . + . ID=DAFVNP010000027.1:1..52586;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000027.1 tpg gene 569 1186 . - . ID=gene-L8R42_001960;Name=L8R42_001960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001960 DAFVNP010000027.1 Protein Homology CDS 569 1186 . - 0 ID=cds-HBQ7390045.1;Parent=gene-L8R42_001960;Dbxref=NCBI_GP:HBQ7390045.1;Name=HBQ7390045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528503.1;locus_tag=L8R42_001960;product=hypothetical protein;protein_id=HBQ7390045.1;transl_table=11 DAFVNP010000027.1 tpg gene 1350 2711 . + . ID=gene-L8R42_001961;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=L8R42_001961 DAFVNP010000027.1 Protein Homology CDS 1350 2711 . + 0 ID=cds-HBQ7390046.1;Parent=gene-L8R42_001961;Dbxref=NCBI_GP:HBQ7390046.1;Name=HBQ7390046.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=L8R42_001961;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=HBQ7390046.1;transl_table=11 DAFVNP010000027.1 tpg gene 3162 4208 . + . ID=gene-L8R42_001962;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=L8R42_001962 DAFVNP010000027.1 Protein Homology CDS 3162 4208 . + 0 ID=cds-HBQ7390047.1;Parent=gene-L8R42_001962;Dbxref=NCBI_GP:HBQ7390047.1;Name=HBQ7390047.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=L8R42_001962;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=HBQ7390047.1;transl_table=11 DAFVNP010000027.1 tpg gene 4244 4660 . - . ID=gene-L8R42_001963;Name=L8R42_001963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001963 DAFVNP010000027.1 Protein Homology CDS 4244 4660 . - 0 ID=cds-HBQ7390048.1;Parent=gene-L8R42_001963;Dbxref=NCBI_GP:HBQ7390048.1;Name=HBQ7390048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=L8R42_001963;product=CesT family type III secretion system chaperone;protein_id=HBQ7390048.1;transl_table=11 DAFVNP010000027.1 tpg gene 4782 5117 . - . ID=gene-L8R42_001964;Name=L8R42_001964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001964 DAFVNP010000027.1 Protein Homology CDS 4782 5117 . - 0 ID=cds-HBQ7390049.1;Parent=gene-L8R42_001964;Dbxref=NCBI_GP:HBQ7390049.1;Name=HBQ7390049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=L8R42_001964;product=hypothetical protein;protein_id=HBQ7390049.1;transl_table=11 DAFVNP010000027.1 tpg gene 5682 6581 . + . ID=gene-L8R42_001965;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=L8R42_001965 DAFVNP010000027.1 Protein Homology CDS 5682 6581 . + 0 ID=cds-HBQ7390050.1;Parent=gene-L8R42_001965;Dbxref=NCBI_GP:HBQ7390050.1;Name=HBQ7390050.1;gbkey=CDS;gene=yegS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=L8R42_001965;product=lipid kinase YegS;protein_id=HBQ7390050.1;transl_table=11 DAFVNP010000027.1 tpg gene 6634 7686 . - . ID=gene-L8R42_001966;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=L8R42_001966 DAFVNP010000027.1 Protein Homology CDS 6634 7686 . - 0 ID=cds-HBQ7390051.1;Parent=gene-L8R42_001966;Dbxref=NCBI_GP:HBQ7390051.1;Name=HBQ7390051.1;gbkey=CDS;gene=fbaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=L8R42_001966;product=class I fructose-bisphosphate aldolase;protein_id=HBQ7390051.1;transl_table=11 DAFVNP010000027.1 tpg gene 7940 9211 . + . ID=gene-L8R42_001967;Name=L8R42_001967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001967 DAFVNP010000027.1 Protein Homology CDS 7940 9211 . + 0 ID=cds-HBQ7390052.1;Parent=gene-L8R42_001967;Dbxref=NCBI_GP:HBQ7390052.1;Name=HBQ7390052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=L8R42_001967;product=MFS transporter;protein_id=HBQ7390052.1;transl_table=11 DAFVNP010000027.1 tpg gene 9208 10212 . + . ID=gene-L8R42_001968;Name=L8R42_001968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001968 DAFVNP010000027.1 Protein Homology CDS 9208 10212 . + 0 ID=cds-HBQ7390053.1;Parent=gene-L8R42_001968;Dbxref=NCBI_GP:HBQ7390053.1;Name=HBQ7390053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=L8R42_001968;product=ADP-ribosylglycohydrolase family protein;protein_id=HBQ7390053.1;transl_table=11 DAFVNP010000027.1 tpg gene 10209 11174 . + . ID=gene-L8R42_001969;Name=L8R42_001969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001969 DAFVNP010000027.1 Protein Homology CDS 10209 11174 . + 0 ID=cds-HBQ7390054.1;Parent=gene-L8R42_001969;Dbxref=NCBI_GP:HBQ7390054.1;Name=HBQ7390054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=L8R42_001969;product=sugar kinase;protein_id=HBQ7390054.1;transl_table=11 DAFVNP010000027.1 tpg gene 11148 11894 . - . ID=gene-L8R42_001970;Name=L8R42_001970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001970 DAFVNP010000027.1 Protein Homology CDS 11148 11894 . - 0 ID=cds-HBQ7390055.1;Parent=gene-L8R42_001970;Dbxref=NCBI_GP:HBQ7390055.1;Name=HBQ7390055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=L8R42_001970;product=GntR family transcriptional regulator;protein_id=HBQ7390055.1;transl_table=11 DAFVNP010000027.1 tpg gene 11930 12730 . - . ID=gene-L8R42_001971;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=L8R42_001971 DAFVNP010000027.1 Protein Homology CDS 11930 12730 . - 0 ID=cds-HBQ7390056.1;Parent=gene-L8R42_001971;Dbxref=NCBI_GP:HBQ7390056.1;Name=HBQ7390056.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=L8R42_001971;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=HBQ7390056.1;transl_table=11 DAFVNP010000027.1 tpg gene 12717 13514 . - . ID=gene-L8R42_001972;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=L8R42_001972 DAFVNP010000027.1 Protein Homology CDS 12717 13514 . - 0 ID=cds-HBQ7390057.1;Parent=gene-L8R42_001972;Dbxref=NCBI_GP:HBQ7390057.1;Name=HBQ7390057.1;gbkey=CDS;gene=thiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=L8R42_001972;product=hydroxyethylthiazole kinase;protein_id=HBQ7390057.1;transl_table=11 DAFVNP010000027.1 cmsearch riboswitch 13546 13642 . - . ID=id-DAFVNP010000027.1:13546..13642;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch DAFVNP010000027.1 tpg gene 13924 14238 . + . ID=gene-L8R42_001973;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=L8R42_001973 DAFVNP010000027.1 Protein Homology CDS 13924 14238 . + 0 ID=cds-HBQ7390058.1;Parent=gene-L8R42_001973;Dbxref=NCBI_GP:HBQ7390058.1;Name=HBQ7390058.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=L8R42_001973;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=HBQ7390058.1;transl_table=11 DAFVNP010000027.1 tpg gene 14280 15287 . - . ID=gene-L8R42_001974;Name=L8R42_001974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001974 DAFVNP010000027.1 Protein Homology CDS 14280 15287 . - 0 ID=cds-HBQ7390059.1;Parent=gene-L8R42_001974;Dbxref=NCBI_GP:HBQ7390059.1;Name=HBQ7390059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269814.1;locus_tag=L8R42_001974;product=type 1 fimbrial protein;protein_id=HBQ7390059.1;transl_table=11 DAFVNP010000027.1 tpg gene 15296 17776 . - . ID=gene-L8R42_001975;Name=L8R42_001975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001975 DAFVNP010000027.1 Protein Homology CDS 15296 17776 . - 0 ID=cds-HBQ7390060.1;Parent=gene-L8R42_001975;Dbxref=NCBI_GP:HBQ7390060.1;Name=HBQ7390060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310942.1;locus_tag=L8R42_001975;product=fimbrial biogenesis outer membrane usher protein;protein_id=HBQ7390060.1;transl_table=11 DAFVNP010000027.1 tpg gene 17789 18469 . - . ID=gene-L8R42_001976;Name=L8R42_001976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001976 DAFVNP010000027.1 Protein Homology CDS 17789 18469 . - 0 ID=cds-HBQ7390061.1;Parent=gene-L8R42_001976;Dbxref=NCBI_GP:HBQ7390061.1;Name=HBQ7390061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734581.1;locus_tag=L8R42_001976;product=fimbria/pilus periplasmic chaperone;protein_id=HBQ7390061.1;transl_table=11 DAFVNP010000027.1 tpg gene 18516 19061 . - . ID=gene-L8R42_001977;Name=L8R42_001977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001977 DAFVNP010000027.1 Protein Homology CDS 18516 19061 . - 0 ID=cds-HBQ7390062.1;Parent=gene-L8R42_001977;Dbxref=NCBI_GP:HBQ7390062.1;Name=HBQ7390062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830494.1;locus_tag=L8R42_001977;product=fimbrial protein;protein_id=HBQ7390062.1;transl_table=11 DAFVNP010000027.1 tpg gene 19340 19621 . - . ID=gene-L8R42_001978;Name=L8R42_001978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001978 DAFVNP010000027.1 Protein Homology CDS 19340 19621 . - 0 ID=cds-HBQ7390063.1;Parent=gene-L8R42_001978;Dbxref=NCBI_GP:HBQ7390063.1;Name=HBQ7390063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543027.1;locus_tag=L8R42_001978;product=DUF2574 family protein;protein_id=HBQ7390063.1;transl_table=11 DAFVNP010000027.1 tpg gene 19888 20997 . - . ID=gene-L8R42_001979;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=L8R42_001979 DAFVNP010000027.1 Protein Homology CDS 19888 20997 . - 0 ID=cds-HBQ7390064.1;Parent=gene-L8R42_001979;Dbxref=NCBI_GP:HBQ7390064.1;Name=HBQ7390064.1;gbkey=CDS;gene=apbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=L8R42_001979;product=iron-sulfur cluster carrier protein ApbC;protein_id=HBQ7390064.1;transl_table=11 DAFVNP010000027.1 tpg gene 21162 23195 . + . ID=gene-L8R42_001980;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=L8R42_001980 DAFVNP010000027.1 Protein Homology CDS 21162 23195 . + 0 ID=cds-HBQ7390065.1;Parent=gene-L8R42_001980;Dbxref=NCBI_GP:HBQ7390065.1;Name=HBQ7390065.1;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=L8R42_001980;product=methionine--tRNA ligase;protein_id=HBQ7390065.1;transl_table=11 DAFVNP010000027.1 tpg gene 23436 23894 . + . ID=gene-L8R42_001981;Name=L8R42_001981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001981 DAFVNP010000027.1 Protein Homology CDS 23436 23894 . + 0 ID=cds-HBQ7390066.1;Parent=gene-L8R42_001981;Dbxref=NCBI_GP:HBQ7390066.1;Name=HBQ7390066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=L8R42_001981;product=YehR family lipoprotein;protein_id=HBQ7390066.1;transl_table=11 DAFVNP010000027.1 tpg gene 24066 24596 . + . ID=gene-L8R42_001982;Name=L8R42_001982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001982 DAFVNP010000027.1 Protein Homology CDS 24066 24596 . + 0 ID=cds-HBQ7390067.1;Parent=gene-L8R42_001982;Dbxref=NCBI_GP:HBQ7390067.1;Name=HBQ7390067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=L8R42_001982;product=YehR family lipoprotein;protein_id=HBQ7390067.1;transl_table=11 DAFVNP010000027.1 tpg gene 24653 25120 . - . ID=gene-L8R42_001983;Name=L8R42_001983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001983 DAFVNP010000027.1 Protein Homology CDS 24653 25120 . - 0 ID=cds-HBQ7390068.1;Parent=gene-L8R42_001983;Dbxref=NCBI_GP:HBQ7390068.1;Name=HBQ7390068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=L8R42_001983;product=DUF1456 family protein;protein_id=HBQ7390068.1;transl_table=11 DAFVNP010000027.1 tpg gene 25167 25886 . - . ID=gene-L8R42_001984;Name=yehT;gbkey=Gene;gene=yehT;gene_biotype=protein_coding;locus_tag=L8R42_001984 DAFVNP010000027.1 Protein Homology CDS 25167 25886 . - 0 ID=cds-HBQ7390069.1;Parent=gene-L8R42_001984;Dbxref=NCBI_GP:HBQ7390069.1;Name=HBQ7390069.1;gbkey=CDS;gene=yehT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=L8R42_001984;product=two-component system response regulator BtsR;protein_id=HBQ7390069.1;transl_table=11 DAFVNP010000027.1 tpg gene 25883 27568 . - . ID=gene-L8R42_001985;Name=L8R42_001985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001985 DAFVNP010000027.1 Protein Homology CDS 25883 27568 . - 0 ID=cds-HBQ7390070.1;Parent=gene-L8R42_001985;Dbxref=NCBI_GP:HBQ7390070.1;Name=HBQ7390070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=L8R42_001985;product=sensor histidine kinase;protein_id=HBQ7390070.1;transl_table=11 DAFVNP010000027.1 tpg gene 27791 28522 . + . ID=gene-L8R42_001986;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=L8R42_001986 DAFVNP010000027.1 Protein Homology CDS 27791 28522 . + 0 ID=cds-HBQ7390071.1;Parent=gene-L8R42_001986;Dbxref=NCBI_GP:HBQ7390071.1;Name=HBQ7390071.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=L8R42_001986;product=HTH-type transcriptional regulator MlrA;protein_id=HBQ7390071.1;transl_table=11 DAFVNP010000027.1 tpg gene 28582 28689 . + . ID=gene-L8R42_001987;Name=L8R42_001987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001987 DAFVNP010000027.1 Protein Homology CDS 28582 28689 . + 0 ID=cds-HBQ7390072.1;Parent=gene-L8R42_001987;Dbxref=NCBI_GP:HBQ7390072.1;Name=HBQ7390072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=L8R42_001987;product=protein YohO;protein_id=HBQ7390072.1;transl_table=11 DAFVNP010000027.1 tpg gene 28670 29401 . - . ID=gene-L8R42_001988;Name=L8R42_001988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001988 DAFVNP010000027.1 Protein Homology CDS 28670 29401 . - 0 ID=cds-HBQ7390073.1;Parent=gene-L8R42_001988;Dbxref=NCBI_GP:HBQ7390073.1;Name=HBQ7390073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=L8R42_001988;product=ABC transporter permease;protein_id=HBQ7390073.1;transl_table=11 DAFVNP010000027.1 tpg gene 29385 30332 . - . ID=gene-L8R42_001989;Name=L8R42_001989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001989 DAFVNP010000027.1 Protein Homology CDS 29385 30332 . - 0 ID=cds-HBQ7390074.1;Parent=gene-L8R42_001989;Dbxref=NCBI_GP:HBQ7390074.1;Name=HBQ7390074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=L8R42_001989;product=ABC transporter ATP-binding protein;protein_id=HBQ7390074.1;transl_table=11 DAFVNP010000027.1 tpg gene 30325 31494 . - . ID=gene-L8R42_001990;Name=L8R42_001990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001990 DAFVNP010000027.1 Protein Homology CDS 30325 31494 . - 0 ID=cds-HBQ7390075.1;Parent=gene-L8R42_001990;Dbxref=NCBI_GP:HBQ7390075.1;Name=HBQ7390075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=L8R42_001990;product=ABC transporter permease;protein_id=HBQ7390075.1;transl_table=11 DAFVNP010000027.1 tpg gene 31498 32415 . - . ID=gene-L8R42_001991;Name=L8R42_001991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001991 DAFVNP010000027.1 Protein Homology CDS 31498 32415 . - 0 ID=cds-HBQ7390076.1;Parent=gene-L8R42_001991;Dbxref=NCBI_GP:HBQ7390076.1;Name=HBQ7390076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=L8R42_001991;product=ABC transporter substrate-binding protein;protein_id=HBQ7390076.1;transl_table=11 DAFVNP010000027.1 tpg gene 32596 34893 . - . ID=gene-L8R42_001992;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=L8R42_001992 DAFVNP010000027.1 Protein Homology CDS 32596 34893 . - 0 ID=cds-HBQ7390077.1;Parent=gene-L8R42_001992;Dbxref=NCBI_GP:HBQ7390077.1;Name=HBQ7390077.1;gbkey=CDS;gene=bglX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=L8R42_001992;product=beta-glucosidase BglX;protein_id=HBQ7390077.1;transl_table=11 DAFVNP010000027.1 tpg gene 35160 36890 . + . ID=gene-L8R42_001993;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=L8R42_001993 DAFVNP010000027.1 Protein Homology CDS 35160 36890 . + 0 ID=cds-HBQ7390078.1;Parent=gene-L8R42_001993;Dbxref=NCBI_GP:HBQ7390078.1;Name=HBQ7390078.1;gbkey=CDS;gene=dld;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=L8R42_001993;product=D-lactate dehydrogenase;protein_id=HBQ7390078.1;transl_table=11 DAFVNP010000027.1 tpg gene 36948 37895 . - . ID=gene-L8R42_001994;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=L8R42_001994 DAFVNP010000027.1 Protein Homology CDS 36948 37895 . - 0 ID=cds-HBQ7390079.1;Parent=gene-L8R42_001994;Dbxref=NCBI_GP:HBQ7390079.1;Name=HBQ7390079.1;gbkey=CDS;gene=pbpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=L8R42_001994;product=D-alanyl-D-alanine endopeptidase;protein_id=HBQ7390079.1;transl_table=11 DAFVNP010000027.1 tpg gene 38061 38648 . - . ID=gene-L8R42_001995;Name=L8R42_001995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001995 DAFVNP010000027.1 Protein Homology CDS 38061 38648 . - 0 ID=cds-HBQ7390080.1;Parent=gene-L8R42_001995;Dbxref=NCBI_GP:HBQ7390080.1;Name=HBQ7390080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=L8R42_001995;product=YIP1 family protein;protein_id=HBQ7390080.1;transl_table=11 DAFVNP010000027.1 tpg gene 38807 39376 . + . ID=gene-L8R42_001996;Name=L8R42_001996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001996 DAFVNP010000027.1 Protein Homology CDS 38807 39376 . + 0 ID=cds-HBQ7390081.1;Parent=gene-L8R42_001996;Dbxref=NCBI_GP:HBQ7390081.1;Name=HBQ7390081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=L8R42_001996;product=DedA family protein;protein_id=HBQ7390081.1;transl_table=11 DAFVNP010000027.1 tpg gene 39425 40186 . - . ID=gene-L8R42_001997;Name=L8R42_001997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_001997 DAFVNP010000027.1 Protein Homology CDS 39425 40186 . - 0 ID=cds-HBQ7390082.1;Parent=gene-L8R42_001997;Dbxref=NCBI_GP:HBQ7390082.1;Name=HBQ7390082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=L8R42_001997;product=SDR family oxidoreductase;protein_id=HBQ7390082.1;transl_table=11 DAFVNP010000027.1 tpg gene 40252 41688 . - . ID=gene-L8R42_001998;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=L8R42_001998 DAFVNP010000027.1 Protein Homology CDS 40252 41688 . - 0 ID=cds-HBQ7390083.1;Parent=gene-L8R42_001998;Dbxref=NCBI_GP:HBQ7390083.1;Name=HBQ7390083.1;gbkey=CDS;gene=mdtQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=L8R42_001998;product=multidrug resistance outer membrane protein MdtQ;protein_id=HBQ7390083.1;transl_table=11 DAFVNP010000027.1 tpg gene 42006 42089 . + . ID=gene-L8R42_001999;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=L8R42_001999 DAFVNP010000027.1 Protein Homology CDS 42006 42089 . + 0 ID=cds-HBQ7390084.1;Parent=gene-L8R42_001999;Dbxref=NCBI_GP:HBQ7390084.1;Name=HBQ7390084.1;gbkey=CDS;gene=yohP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233574.1;locus_tag=L8R42_001999;product=protein YohP;protein_id=HBQ7390084.1;transl_table=11 DAFVNP010000027.1 tpg gene 42147 43085 . - . ID=gene-L8R42_002000;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=L8R42_002000 DAFVNP010000027.1 Protein Homology CDS 42147 43085 . - 0 ID=cds-HBQ7390085.1;Parent=gene-L8R42_002000;Dbxref=NCBI_GP:HBQ7390085.1;Name=HBQ7390085.1;gbkey=CDS;gene=dusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=L8R42_002000;product=tRNA dihydrouridine(16) synthase DusC;protein_id=HBQ7390085.1;transl_table=11 DAFVNP010000027.1 tpg gene 43194 44387 . - . ID=gene-L8R42_002001;Name=L8R42_002001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002001 DAFVNP010000027.1 Protein Homology CDS 43194 44387 . - 0 ID=cds-HBQ7390086.1;Parent=gene-L8R42_002001;Dbxref=NCBI_GP:HBQ7390086.1;Name=HBQ7390086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=L8R42_002001;product=3-hydroxybenzoate 6-monooxygenase;protein_id=HBQ7390086.1;transl_table=11 DAFVNP010000027.1 tpg gene 44402 45046 . - . ID=gene-L8R42_002002;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=L8R42_002002 DAFVNP010000027.1 Protein Homology CDS 44402 45046 . - 0 ID=cds-HBQ7390087.1;Parent=gene-L8R42_002002;Dbxref=NCBI_GP:HBQ7390087.1;Name=HBQ7390087.1;gbkey=CDS;gene=maiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=L8R42_002002;product=maleylacetoacetate isomerase;protein_id=HBQ7390087.1;transl_table=11 DAFVNP010000027.1 tpg gene 45055 45756 . - . ID=gene-L8R42_002003;Name=L8R42_002003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002003 DAFVNP010000027.1 Protein Homology CDS 45055 45756 . - 0 ID=cds-HBQ7390088.1;Parent=gene-L8R42_002003;Dbxref=NCBI_GP:HBQ7390088.1;Name=HBQ7390088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=L8R42_002003;product=fumarylacetoacetate hydrolase family protein;protein_id=HBQ7390088.1;transl_table=11 DAFVNP010000027.1 tpg gene 45772 46809 . - . ID=gene-L8R42_002004;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=L8R42_002004 DAFVNP010000027.1 Protein Homology CDS 45772 46809 . - 0 ID=cds-HBQ7390089.1;Parent=gene-L8R42_002004;Dbxref=NCBI_GP:HBQ7390089.1;Name=HBQ7390089.1;gbkey=CDS;gene=gtdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=L8R42_002004;product=gentisate 1%2C2-dioxygenase;protein_id=HBQ7390089.1;transl_table=11 DAFVNP010000027.1 tpg gene 46821 48179 . - . ID=gene-L8R42_002005;Name=L8R42_002005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002005 DAFVNP010000027.1 Protein Homology CDS 46821 48179 . - 0 ID=cds-HBQ7390090.1;Parent=gene-L8R42_002005;Dbxref=NCBI_GP:HBQ7390090.1;Name=HBQ7390090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=L8R42_002005;product=aromatic acid/H+ symport family MFS transporter;protein_id=HBQ7390090.1;transl_table=11 DAFVNP010000027.1 tpg gene 48305 49213 . + . ID=gene-L8R42_002006;Name=L8R42_002006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002006 DAFVNP010000027.1 Protein Homology CDS 48305 49213 . + 0 ID=cds-HBQ7390091.1;Parent=gene-L8R42_002006;Dbxref=NCBI_GP:HBQ7390091.1;Name=HBQ7390091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=L8R42_002006;product=LysR family transcriptional regulator;protein_id=HBQ7390091.1;transl_table=11 DAFVNP010000027.1 tpg gene 49345 49743 . + . ID=gene-L8R42_002007;Name=L8R42_002007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002007 DAFVNP010000027.1 Protein Homology CDS 49345 49743 . + 0 ID=cds-HBQ7390092.1;Parent=gene-L8R42_002007;Dbxref=NCBI_GP:HBQ7390092.1;Name=HBQ7390092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=L8R42_002007;product=CidA/LrgA family protein;protein_id=HBQ7390092.1;transl_table=11 DAFVNP010000027.1 tpg gene 49740 50435 . + . ID=gene-L8R42_002008;Name=L8R42_002008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002008 DAFVNP010000027.1 Protein Homology CDS 49740 50435 . + 0 ID=cds-HBQ7390093.1;Parent=gene-L8R42_002008;Dbxref=NCBI_GP:HBQ7390093.1;Name=HBQ7390093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=L8R42_002008;product=CidB/LrgB family autolysis modulator;protein_id=HBQ7390093.1;transl_table=11 DAFVNP010000027.1 tpg gene 50589 51473 . + . ID=gene-L8R42_002009;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=L8R42_002009 DAFVNP010000027.1 Protein Homology CDS 50589 51473 . + 0 ID=cds-HBQ7390094.1;Parent=gene-L8R42_002009;Dbxref=NCBI_GP:HBQ7390094.1;Name=HBQ7390094.1;gbkey=CDS;gene=cdd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=L8R42_002009;product=cytidine deaminase;protein_id=HBQ7390094.1;transl_table=11 DAFVNP010000027.1 tpg gene 51650 52369 . + . ID=gene-L8R42_002010;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=L8R42_002010 DAFVNP010000027.1 Protein Homology CDS 51650 52369 . + 0 ID=cds-HBQ7390095.1;Parent=gene-L8R42_002010;Dbxref=NCBI_GP:HBQ7390095.1;Name=HBQ7390095.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=L8R42_002010;product=outer membrane permeability protein SanA;protein_id=HBQ7390095.1;transl_table=11 DAFVNP010000027.1 tpg gene 52366 52586 . + . ID=gene-L8R42_002011;Name=L8R42_002011;end_range=52586,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002011;partial=true DAFVNP010000027.1 Protein Homology CDS 52366 52586 . + 0 ID=cds-HBQ7390096.1;Parent=gene-L8R42_002011;Dbxref=NCBI_GP:HBQ7390096.1;Name=HBQ7390096.1;end_range=52586,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=L8R42_002011;partial=true;product=DUF2542 family protein;protein_id=HBQ7390096.1;transl_table=11 ##sequence-region DAFVNP010000028.1 1 51895 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000028.1 tpg region 1 51895 . + . ID=DAFVNP010000028.1:1..51895;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000028.1 tpg gene 1 120 . + . ID=gene-L8R42_002012;Name=L8R42_002012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002012;partial=true;start_range=.,1 DAFVNP010000028.1 Protein Homology CDS 1 120 . + 0 ID=cds-HBQ7390097.1;Parent=gene-L8R42_002012;Dbxref=NCBI_GP:HBQ7390097.1;Name=HBQ7390097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=L8R42_002012;partial=true;product=DUF1161 domain-containing protein;protein_id=HBQ7390097.1;start_range=.,1;transl_table=11 DAFVNP010000028.1 tpg gene 274 2715 . + . ID=gene-L8R42_002013;Name=L8R42_002013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002013 DAFVNP010000028.1 Protein Homology CDS 274 2715 . + 0 ID=cds-HBQ7390098.1;Parent=gene-L8R42_002013;Dbxref=NCBI_GP:HBQ7390098.1;Name=HBQ7390098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460459.1;locus_tag=L8R42_002013;product=dimethyl sulfoxide reductase subunit A;protein_id=HBQ7390098.1;transl_table=11 DAFVNP010000028.1 tpg gene 2813 5248 . + . ID=gene-L8R42_002014;Name=L8R42_002014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002014 DAFVNP010000028.1 Protein Homology CDS 2813 5248 . + 0 ID=cds-HBQ7390099.1;Parent=gene-L8R42_002014;Dbxref=NCBI_GP:HBQ7390099.1;Name=HBQ7390099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=L8R42_002014;product=dimethyl sulfoxide reductase subunit A;protein_id=HBQ7390099.1;transl_table=11 DAFVNP010000028.1 tpg gene 5259 5876 . + . ID=gene-L8R42_002015;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=L8R42_002015 DAFVNP010000028.1 Protein Homology CDS 5259 5876 . + 0 ID=cds-HBQ7390100.1;Parent=gene-L8R42_002015;Dbxref=NCBI_GP:HBQ7390100.1;Name=HBQ7390100.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=L8R42_002015;product=dimethylsulfoxide reductase subunit B;protein_id=HBQ7390100.1;transl_table=11 DAFVNP010000028.1 tpg gene 5878 6735 . + . ID=gene-L8R42_002016;Name=L8R42_002016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002016 DAFVNP010000028.1 Protein Homology CDS 5878 6735 . + 0 ID=cds-HBQ7390101.1;Parent=gene-L8R42_002016;Dbxref=NCBI_GP:HBQ7390101.1;Name=HBQ7390101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=L8R42_002016;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HBQ7390101.1;transl_table=11 DAFVNP010000028.1 tpg gene 6778 7392 . + . ID=gene-L8R42_002017;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=L8R42_002017 DAFVNP010000028.1 Protein Homology CDS 6778 7392 . + 0 ID=cds-HBQ7390102.1;Parent=gene-L8R42_002017;Dbxref=NCBI_GP:HBQ7390102.1;Name=HBQ7390102.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=L8R42_002017;product=Tat proofreading chaperone DmsD;protein_id=HBQ7390102.1;transl_table=11 DAFVNP010000028.1 tpg gene 7697 8407 . + . ID=gene-L8R42_002018;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=L8R42_002018 DAFVNP010000028.1 Protein Homology CDS 7697 8407 . + 0 ID=cds-HBQ7390103.1;Parent=gene-L8R42_002018;Dbxref=NCBI_GP:HBQ7390103.1;Name=HBQ7390103.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=L8R42_002018;product=osmoprotectant ABC transporter permease OsmY;protein_id=HBQ7390103.1;transl_table=11 DAFVNP010000028.1 tpg gene 8436 9338 . + . ID=gene-L8R42_002019;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=L8R42_002019 DAFVNP010000028.1 Protein Homology CDS 8436 9338 . + 0 ID=cds-HBQ7390104.1;Parent=gene-L8R42_002019;Dbxref=NCBI_GP:HBQ7390104.1;Name=HBQ7390104.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=L8R42_002019;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=HBQ7390104.1;transl_table=11 DAFVNP010000028.1 tpg gene 9348 9995 . + . ID=gene-L8R42_002020;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=L8R42_002020 DAFVNP010000028.1 Protein Homology CDS 9348 9995 . + 0 ID=cds-HBQ7390105.1;Parent=gene-L8R42_002020;Dbxref=NCBI_GP:HBQ7390105.1;Name=HBQ7390105.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=L8R42_002020;product=osmoprotectant ABC transporter permease OsmW;protein_id=HBQ7390105.1;transl_table=11 DAFVNP010000028.1 tpg gene 9995 11143 . + . ID=gene-L8R42_002021;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=L8R42_002021 DAFVNP010000028.1 Protein Homology CDS 9995 11143 . + 0 ID=cds-HBQ7390106.1;Parent=gene-L8R42_002021;Dbxref=NCBI_GP:HBQ7390106.1;Name=HBQ7390106.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=L8R42_002021;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=HBQ7390106.1;transl_table=11 DAFVNP010000028.1 tpg gene 11279 12568 . + . ID=gene-L8R42_002022;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=L8R42_002022 DAFVNP010000028.1 Protein Homology CDS 11279 12568 . + 0 ID=cds-HBQ7390107.1;Parent=gene-L8R42_002022;Dbxref=NCBI_GP:HBQ7390107.1;Name=HBQ7390107.1;gbkey=CDS;gene=clcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=L8R42_002022;product=voltage-gated ClC-type chloride channel ClcB;protein_id=HBQ7390107.1;transl_table=11 DAFVNP010000028.1 tpg gene 12524 13219 . - . ID=gene-L8R42_002023;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=L8R42_002023 DAFVNP010000028.1 Protein Homology CDS 12524 13219 . - 0 ID=cds-HBQ7390108.1;Parent=gene-L8R42_002023;Dbxref=NCBI_GP:HBQ7390108.1;Name=HBQ7390108.1;gbkey=CDS;gene=bioD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=L8R42_002023;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=HBQ7390108.1;transl_table=11 DAFVNP010000028.1 tpg gene 13345 14565 . - . ID=gene-L8R42_002024;Name=L8R42_002024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002024 DAFVNP010000028.1 Protein Homology CDS 13345 14565 . - 0 ID=cds-HBQ7390109.1;Parent=gene-L8R42_002024;Dbxref=NCBI_GP:HBQ7390109.1;Name=HBQ7390109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=L8R42_002024;product=ROK family transcriptional regulator;protein_id=HBQ7390109.1;transl_table=11 DAFVNP010000028.1 tpg gene 14693 15592 . - . ID=gene-L8R42_002025;Name=L8R42_002025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002025 DAFVNP010000028.1 Protein Homology CDS 14693 15592 . - 0 ID=cds-HBQ7390110.1;Parent=gene-L8R42_002025;Dbxref=NCBI_GP:HBQ7390110.1;Name=HBQ7390110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=L8R42_002025;product=LysR family transcriptional regulator;protein_id=HBQ7390110.1;transl_table=11 DAFVNP010000028.1 tpg gene 15712 16965 . + . ID=gene-L8R42_002026;Name=L8R42_002026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002026 DAFVNP010000028.1 Protein Homology CDS 15712 16965 . + 0 ID=cds-HBQ7390111.1;Parent=gene-L8R42_002026;Dbxref=NCBI_GP:HBQ7390111.1;Name=HBQ7390111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=L8R42_002026;product=MFS transporter;protein_id=HBQ7390111.1;transl_table=11 DAFVNP010000028.1 tpg gene 17360 17611 . + . ID=gene-L8R42_002027;Name=L8R42_002027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002027 DAFVNP010000028.1 Protein Homology CDS 17360 17611 . + 0 ID=cds-HBQ7390112.1;Parent=gene-L8R42_002027;Dbxref=NCBI_GP:HBQ7390112.1;Name=HBQ7390112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=L8R42_002027;product=acid shock protein;protein_id=HBQ7390112.1;transl_table=11 DAFVNP010000028.1 tpg gene 17880 18701 . + . ID=gene-L8R42_002028;Name=L8R42_002028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002028 DAFVNP010000028.1 Protein Homology CDS 17880 18701 . + 0 ID=cds-HBQ7390113.1;Parent=gene-L8R42_002028;Dbxref=NCBI_GP:HBQ7390113.1;Name=HBQ7390113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=L8R42_002028;product=serine protease;protein_id=HBQ7390113.1;transl_table=11 DAFVNP010000028.1 tpg gene 18741 19070 . - . ID=gene-L8R42_002029;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=L8R42_002029 DAFVNP010000028.1 Protein Homology CDS 18741 19070 . - 0 ID=cds-HBQ7390114.1;Parent=gene-L8R42_002029;Dbxref=NCBI_GP:HBQ7390114.1;Name=HBQ7390114.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=L8R42_002029;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=HBQ7390114.1;transl_table=11 DAFVNP010000028.1 tpg gene 19057 19419 . - . ID=gene-L8R42_002030;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=L8R42_002030 DAFVNP010000028.1 Protein Homology CDS 19057 19419 . - 0 ID=cds-HBQ7390115.1;Parent=gene-L8R42_002030;Dbxref=NCBI_GP:HBQ7390115.1;Name=HBQ7390115.1;gbkey=CDS;gene=mdtJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=L8R42_002030;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=HBQ7390115.1;transl_table=11 DAFVNP010000028.1 tpg gene 19837 20871 . + . ID=gene-L8R42_002031;Name=L8R42_002031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002031 DAFVNP010000028.1 Protein Homology CDS 19837 20871 . + 0 ID=cds-HBQ7390116.1;Parent=gene-L8R42_002031;Dbxref=NCBI_GP:HBQ7390116.1;Name=HBQ7390116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=L8R42_002031;product=AI-2E family transporter;protein_id=HBQ7390116.1;transl_table=11 DAFVNP010000028.1 tpg gene 21046 22434 . - . ID=gene-L8R42_002032;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=L8R42_002032 DAFVNP010000028.1 Protein Homology CDS 21046 22434 . - 0 ID=cds-HBQ7390117.1;Parent=gene-L8R42_002032;Dbxref=NCBI_GP:HBQ7390117.1;Name=HBQ7390117.1;gbkey=CDS;gene=pntB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=L8R42_002032;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=HBQ7390117.1;transl_table=11 DAFVNP010000028.1 tpg gene 22445 23974 . - . ID=gene-L8R42_002033;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=L8R42_002033 DAFVNP010000028.1 Protein Homology CDS 22445 23974 . - 0 ID=cds-HBQ7390118.1;Parent=gene-L8R42_002033;Dbxref=NCBI_GP:HBQ7390118.1;Name=HBQ7390118.1;gbkey=CDS;gene=pntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=L8R42_002033;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=HBQ7390118.1;transl_table=11 DAFVNP010000028.1 tpg gene 24501 25445 . + . ID=gene-L8R42_002034;Name=L8R42_002034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002034 DAFVNP010000028.1 Protein Homology CDS 24501 25445 . + 0 ID=cds-HBQ7390119.1;Parent=gene-L8R42_002034;Dbxref=NCBI_GP:HBQ7390119.1;Name=HBQ7390119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=L8R42_002034;product=DUF1471 domain-containing protein;protein_id=HBQ7390119.1;transl_table=11 DAFVNP010000028.1 tpg gene 25744 27126 . + . ID=gene-L8R42_002035;Name=L8R42_002035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002035 DAFVNP010000028.1 Protein Homology CDS 25744 27126 . + 0 ID=cds-HBQ7390120.1;Parent=gene-L8R42_002035;Dbxref=NCBI_GP:HBQ7390120.1;Name=HBQ7390120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=L8R42_002035;product=amino acid permease;protein_id=HBQ7390120.1;transl_table=11 DAFVNP010000028.1 tpg gene 27188 27523 . - . ID=gene-L8R42_002036;Name=L8R42_002036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002036 DAFVNP010000028.1 Protein Homology CDS 27188 27523 . - 0 ID=cds-HBQ7390121.1;Parent=gene-L8R42_002036;Dbxref=NCBI_GP:HBQ7390121.1;Name=HBQ7390121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=L8R42_002036;product=GlpM family protein;protein_id=HBQ7390121.1;transl_table=11 DAFVNP010000028.1 tpg gene 27650 28381 . + . ID=gene-L8R42_002037;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=L8R42_002037 DAFVNP010000028.1 Protein Homology CDS 27650 28381 . + 0 ID=cds-HBQ7390122.1;Parent=gene-L8R42_002037;Dbxref=NCBI_GP:HBQ7390122.1;Name=HBQ7390122.1;gbkey=CDS;gene=rstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=L8R42_002037;product=two-component system response regulator RstA;protein_id=HBQ7390122.1;transl_table=11 DAFVNP010000028.1 tpg gene 28861 30012 . + . ID=gene-L8R42_002038;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=L8R42_002038 DAFVNP010000028.1 Protein Homology CDS 28861 30012 . + 0 ID=cds-HBQ7390123.1;Parent=gene-L8R42_002038;Dbxref=NCBI_GP:HBQ7390123.1;Name=HBQ7390123.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=L8R42_002038;product=porin OmpS2;protein_id=HBQ7390123.1;transl_table=11 DAFVNP010000028.1 tpg gene 30165 31871 . + . ID=gene-L8R42_002039;Name=L8R42_002039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002039 DAFVNP010000028.1 Protein Homology CDS 30165 31871 . + 0 ID=cds-HBQ7390124.1;Parent=gene-L8R42_002039;Dbxref=NCBI_GP:HBQ7390124.1;Name=HBQ7390124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=L8R42_002039;product=amidohydrolase;protein_id=HBQ7390124.1;transl_table=11 DAFVNP010000028.1 tpg gene 31982 33283 . + . ID=gene-L8R42_002040;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=L8R42_002040 DAFVNP010000028.1 Protein Homology CDS 31982 33283 . + 0 ID=cds-HBQ7390125.1;Parent=gene-L8R42_002040;Dbxref=NCBI_GP:HBQ7390125.1;Name=HBQ7390125.1;gbkey=CDS;gene=rstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=L8R42_002040;product=two-component system sensor histidine kinase RstB;protein_id=HBQ7390125.1;transl_table=11 DAFVNP010000028.1 tpg gene 33359 34288 . + . ID=gene-L8R42_002041;Name=L8R42_002041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002041 DAFVNP010000028.1 Protein Homology CDS 33359 34288 . + 0 ID=cds-HBQ7390126.1;Parent=gene-L8R42_002041;Dbxref=NCBI_GP:HBQ7390126.1;Name=HBQ7390126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=L8R42_002041;product=DNA replication terminus site-binding protein;protein_id=HBQ7390126.1;transl_table=11 DAFVNP010000028.1 tpg gene 34285 35688 . - . ID=gene-L8R42_002042;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=L8R42_002042 DAFVNP010000028.1 Protein Homology CDS 34285 35688 . - 0 ID=cds-HBQ7390127.1;Parent=gene-L8R42_002042;Dbxref=NCBI_GP:HBQ7390127.1;Name=HBQ7390127.1;gbkey=CDS;gene=fumC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=L8R42_002042;product=class II fumarate hydratase;protein_id=HBQ7390127.1;transl_table=11 DAFVNP010000028.1 tpg gene 35856 37502 . - . ID=gene-L8R42_002043;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=L8R42_002043 DAFVNP010000028.1 Protein Homology CDS 35856 37502 . - 0 ID=cds-HBQ7390128.1;Parent=gene-L8R42_002043;Dbxref=NCBI_GP:HBQ7390128.1;Name=HBQ7390128.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=L8R42_002043;product=class I fumarate hydratase;protein_id=HBQ7390128.1;transl_table=11 DAFVNP010000028.1 tpg gene 37702 38877 . + . ID=gene-L8R42_002044;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=L8R42_002044 DAFVNP010000028.1 Protein Homology CDS 37702 38877 . + 0 ID=cds-HBQ7390129.1;Parent=gene-L8R42_002044;Dbxref=NCBI_GP:HBQ7390129.1;Name=HBQ7390129.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=L8R42_002044;product=mannose-6-phosphate isomerase;protein_id=HBQ7390129.1;transl_table=11 DAFVNP010000028.1 tpg gene 38980 40488 . + . ID=gene-L8R42_002045;Name=L8R42_002045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002045 DAFVNP010000028.1 Protein Homology CDS 38980 40488 . + 0 ID=cds-HBQ7390130.1;Parent=gene-L8R42_002045;Dbxref=NCBI_GP:HBQ7390130.1;Name=HBQ7390130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=L8R42_002045;product=YdgA family protein;protein_id=HBQ7390130.1;transl_table=11 DAFVNP010000028.1 tpg gene 40546 41574 . - . ID=gene-L8R42_002046;Name=L8R42_002046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002046 DAFVNP010000028.1 Protein Homology CDS 40546 41574 . - 0 ID=cds-HBQ7390131.1;Parent=gene-L8R42_002046;Dbxref=NCBI_GP:HBQ7390131.1;Name=HBQ7390131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=L8R42_002046;product=Mal regulon transcriptional regulator MalI;protein_id=HBQ7390131.1;transl_table=11 DAFVNP010000028.1 tpg gene 41747 43339 . + . ID=gene-L8R42_002047;Name=L8R42_002047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002047 DAFVNP010000028.1 Protein Homology CDS 41747 43339 . + 0 ID=cds-HBQ7390132.1;Parent=gene-L8R42_002047;Dbxref=NCBI_GP:HBQ7390132.1;Name=HBQ7390132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=L8R42_002047;product=PTS maltose transporter subunit IICB;protein_id=HBQ7390132.1;transl_table=11 DAFVNP010000028.1 tpg gene 43349 44521 . + . ID=gene-L8R42_002048;Name=L8R42_002048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002048 DAFVNP010000028.1 Protein Homology CDS 43349 44521 . + 0 ID=cds-HBQ7390133.1;Parent=gene-L8R42_002048;Dbxref=NCBI_GP:HBQ7390133.1;Name=HBQ7390133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=L8R42_002048;product=pyridoxal phosphate-dependent aminotransferase;protein_id=HBQ7390133.1;transl_table=11 DAFVNP010000028.1 tpg gene 44739 45740 . + . ID=gene-L8R42_002049;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=L8R42_002049 DAFVNP010000028.1 Protein Homology CDS 44739 45740 . + 0 ID=cds-HBQ7390134.1;Parent=gene-L8R42_002049;Dbxref=NCBI_GP:HBQ7390134.1;Name=HBQ7390134.1;gbkey=CDS;gene=add;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=L8R42_002049;product=adenosine deaminase;protein_id=HBQ7390134.1;transl_table=11 DAFVNP010000028.1 tpg gene 45815 46855 . - . ID=gene-L8R42_002050;Name=L8R42_002050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002050 DAFVNP010000028.1 Protein Homology CDS 45815 46855 . - 0 ID=cds-HBQ7390135.1;Parent=gene-L8R42_002050;Dbxref=NCBI_GP:HBQ7390135.1;Name=HBQ7390135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=L8R42_002050;product=oxidoreductase;protein_id=HBQ7390135.1;transl_table=11 DAFVNP010000028.1 tpg gene 47063 47188 . + . ID=gene-L8R42_002051;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=L8R42_002051 DAFVNP010000028.1 Protein Homology CDS 47063 47188 . + 0 ID=cds-HBQ7390136.1;Parent=gene-L8R42_002051;Dbxref=NCBI_GP:HBQ7390136.1;Name=HBQ7390136.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=L8R42_002051;product=division septum protein Blr;protein_id=HBQ7390136.1;transl_table=11 DAFVNP010000028.1 tpg gene 47486 47701 . + . ID=gene-L8R42_002052;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=L8R42_002052 DAFVNP010000028.1 Protein Homology CDS 47486 47701 . + 0 ID=cds-HBQ7390137.1;Parent=gene-L8R42_002052;Dbxref=NCBI_GP:HBQ7390137.1;Name=HBQ7390137.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=L8R42_002052;product=transcription modulator YdgT;protein_id=HBQ7390137.1;transl_table=11 DAFVNP010000028.1 tpg gene 47790 48230 . + . ID=gene-L8R42_002053;Name=L8R42_002053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002053 DAFVNP010000028.1 Protein Homology CDS 47790 48230 . + 0 ID=cds-HBQ7390138.1;Parent=gene-L8R42_002053;Dbxref=NCBI_GP:HBQ7390138.1;Name=HBQ7390138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=L8R42_002053;product=DUF2569 domain-containing protein;protein_id=HBQ7390138.1;transl_table=11 DAFVNP010000028.1 tpg gene 48307 48888 . + . ID=gene-L8R42_002054;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=L8R42_002054 DAFVNP010000028.1 Protein Homology CDS 48307 48888 . + 0 ID=cds-HBQ7390139.1;Parent=gene-L8R42_002054;Dbxref=NCBI_GP:HBQ7390139.1;Name=HBQ7390139.1;gbkey=CDS;gene=rsxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=L8R42_002054;product=electron transport complex subunit RsxA;protein_id=HBQ7390139.1;transl_table=11 DAFVNP010000028.1 tpg gene 48888 49466 . + . ID=gene-L8R42_002055;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=L8R42_002055 DAFVNP010000028.1 Protein Homology CDS 48888 49466 . + 0 ID=cds-HBQ7390140.1;Parent=gene-L8R42_002055;Dbxref=NCBI_GP:HBQ7390140.1;Name=HBQ7390140.1;gbkey=CDS;gene=rsxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=L8R42_002055;product=electron transport complex subunit RsxB;protein_id=HBQ7390140.1;transl_table=11 DAFVNP010000028.1 tpg gene 49459 51480 . + . ID=gene-L8R42_002056;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=L8R42_002056 DAFVNP010000028.1 Protein Homology CDS 49459 51480 . + 0 ID=cds-HBQ7390141.1;Parent=gene-L8R42_002056;Dbxref=NCBI_GP:HBQ7390141.1;Name=HBQ7390141.1;gbkey=CDS;gene=rsxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=L8R42_002056;product=electron transport complex subunit RsxC;protein_id=HBQ7390141.1;transl_table=11 DAFVNP010000028.1 tpg gene 51481 51895 . + . ID=gene-L8R42_002057;Name=L8R42_002057;end_range=51895,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002057;partial=true DAFVNP010000028.1 Protein Homology CDS 51481 51895 . + 0 ID=cds-HBQ7390142.1;Parent=gene-L8R42_002057;Dbxref=NCBI_GP:HBQ7390142.1;Name=HBQ7390142.1;end_range=51895,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=L8R42_002057;partial=true;product=RnfABCDGE type electron transport complex subunit D;protein_id=HBQ7390142.1;transl_table=11 ##sequence-region DAFVNP010000029.1 1 50574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000029.1 tpg region 1 50574 . + . ID=DAFVNP010000029.1:1..50574;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000029.1 tpg gene 27 344 . - . ID=gene-L8R42_002058;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=L8R42_002058 DAFVNP010000029.1 Protein Homology CDS 27 344 . - 0 ID=cds-HBQ7390143.1;Parent=gene-L8R42_002058;Dbxref=NCBI_GP:HBQ7390143.1;Name=HBQ7390143.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=L8R42_002058;product=transcriptional regulator BolA;protein_id=HBQ7390143.1;transl_table=11 DAFVNP010000029.1 tpg gene 648 1226 . + . ID=gene-L8R42_002059;Name=L8R42_002059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002059 DAFVNP010000029.1 Protein Homology CDS 648 1226 . + 0 ID=cds-HBQ7390144.1;Parent=gene-L8R42_002059;Dbxref=NCBI_GP:HBQ7390144.1;Name=HBQ7390144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=L8R42_002059;product=lipoprotein;protein_id=HBQ7390144.1;transl_table=11 DAFVNP010000029.1 tpg gene 1270 2745 . + . ID=gene-L8R42_002060;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=L8R42_002060 DAFVNP010000029.1 Protein Homology CDS 1270 2745 . + 0 ID=cds-HBQ7390145.1;Parent=gene-L8R42_002060;Dbxref=NCBI_GP:HBQ7390145.1;Name=HBQ7390145.1;gbkey=CDS;gene=ampG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=L8R42_002060;product=muropeptide MFS transporter AmpG;protein_id=HBQ7390145.1;transl_table=11 DAFVNP010000029.1 tpg gene 3198 4154 . + . ID=gene-L8R42_002061;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=L8R42_002061 DAFVNP010000029.1 Protein Homology CDS 3198 4154 . + 0 ID=cds-HBQ7390146.1;Parent=gene-L8R42_002061;Dbxref=NCBI_GP:HBQ7390146.1;Name=HBQ7390146.1;gbkey=CDS;gene=cyoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=L8R42_002061;product=cytochrome o ubiquinol oxidase subunit II;protein_id=HBQ7390146.1;transl_table=11 DAFVNP010000029.1 tpg gene 4165 6156 . + . ID=gene-L8R42_002062;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=L8R42_002062 DAFVNP010000029.1 Protein Homology CDS 4165 6156 . + 0 ID=cds-HBQ7390147.1;Parent=gene-L8R42_002062;Dbxref=NCBI_GP:HBQ7390147.1;Name=HBQ7390147.1;gbkey=CDS;gene=cyoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=L8R42_002062;product=cytochrome o ubiquinol oxidase subunit I;protein_id=HBQ7390147.1;transl_table=11 DAFVNP010000029.1 tpg gene 6146 6760 . + . ID=gene-L8R42_002063;Name=L8R42_002063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002063 DAFVNP010000029.1 Protein Homology CDS 6146 6760 . + 0 ID=cds-HBQ7390148.1;Parent=gene-L8R42_002063;Dbxref=NCBI_GP:HBQ7390148.1;Name=HBQ7390148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=L8R42_002063;product=cytochrome o ubiquinol oxidase subunit III;protein_id=HBQ7390148.1;transl_table=11 DAFVNP010000029.1 tpg gene 6760 7089 . + . ID=gene-L8R42_002064;Name=L8R42_002064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002064 DAFVNP010000029.1 Protein Homology CDS 6760 7089 . + 0 ID=cds-HBQ7390149.1;Parent=gene-L8R42_002064;Dbxref=NCBI_GP:HBQ7390149.1;Name=HBQ7390149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=L8R42_002064;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=HBQ7390149.1;transl_table=11 DAFVNP010000029.1 tpg gene 7101 7991 . + . ID=gene-L8R42_002065;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=L8R42_002065 DAFVNP010000029.1 Protein Homology CDS 7101 7991 . + 0 ID=cds-HBQ7390150.1;Parent=gene-L8R42_002065;Dbxref=NCBI_GP:HBQ7390150.1;Name=HBQ7390150.1;gbkey=CDS;gene=cyoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=L8R42_002065;product=protoheme IX farnesyltransferase;protein_id=HBQ7390150.1;transl_table=11 DAFVNP010000029.1 tpg gene 8039 9508 . - . ID=gene-L8R42_002066;Name=L8R42_002066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002066 DAFVNP010000029.1 Protein Homology CDS 8039 9508 . - 0 ID=cds-HBQ7390151.1;Parent=gene-L8R42_002066;Dbxref=NCBI_GP:HBQ7390151.1;Name=HBQ7390151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524005.1;locus_tag=L8R42_002066;product=sel1 repeat family protein;protein_id=HBQ7390151.1;transl_table=11 DAFVNP010000029.1 tpg gene 9520 11031 . - . ID=gene-L8R42_002067;Name=L8R42_002067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002067 DAFVNP010000029.1 Protein Homology CDS 9520 11031 . - 0 ID=cds-HBQ7390152.1;Parent=gene-L8R42_002067;Dbxref=NCBI_GP:HBQ7390152.1;Name=HBQ7390152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=L8R42_002067;product=SEL1-like repeat protein;protein_id=HBQ7390152.1;transl_table=11 DAFVNP010000029.1 tpg gene 11568 12932 . + . ID=gene-L8R42_002068;Name=L8R42_002068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002068 DAFVNP010000029.1 Protein Homology CDS 11568 12932 . + 0 ID=cds-HBQ7390153.1;Parent=gene-L8R42_002068;Dbxref=NCBI_GP:HBQ7390153.1;Name=HBQ7390153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=L8R42_002068;product=MFS transporter;protein_id=HBQ7390153.1;transl_table=11 DAFVNP010000029.1 tpg gene 12979 13470 . - . ID=gene-L8R42_002069;Name=L8R42_002069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002069 DAFVNP010000029.1 Protein Homology CDS 12979 13470 . - 0 ID=cds-HBQ7390154.1;Parent=gene-L8R42_002069;Dbxref=NCBI_GP:HBQ7390154.1;Name=HBQ7390154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=L8R42_002069;product=YajQ family cyclic di-GMP-binding protein;protein_id=HBQ7390154.1;transl_table=11 DAFVNP010000029.1 tpg gene 13596 14507 . + . ID=gene-L8R42_002070;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=L8R42_002070 DAFVNP010000029.1 Protein Homology CDS 13596 14507 . + 0 ID=cds-HBQ7390155.1;Parent=gene-L8R42_002070;Dbxref=NCBI_GP:HBQ7390155.1;Name=HBQ7390155.1;gbkey=CDS;gene=panE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=L8R42_002070;product=2-dehydropantoate 2-reductase;protein_id=HBQ7390155.1;transl_table=11 DAFVNP010000029.1 tpg gene 14470 15060 . + . ID=gene-L8R42_002071;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=L8R42_002071 DAFVNP010000029.1 Protein Homology CDS 14470 15060 . + 0 ID=cds-HBQ7390156.1;Parent=gene-L8R42_002071;Dbxref=NCBI_GP:HBQ7390156.1;Name=HBQ7390156.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=L8R42_002071;product=protein deglycase YajL;protein_id=HBQ7390156.1;transl_table=11 DAFVNP010000029.1 tpg gene 15157 15966 . - . ID=gene-L8R42_002072;Name=L8R42_002072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002072 DAFVNP010000029.1 Protein Homology CDS 15157 15966 . - 0 ID=cds-HBQ7390157.1;Parent=gene-L8R42_002072;Dbxref=NCBI_GP:HBQ7390157.1;Name=HBQ7390157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=L8R42_002072;product=phosphonoacetaldehyde hydrolase;protein_id=HBQ7390157.1;transl_table=11 DAFVNP010000029.1 tpg gene 15976 17079 . - . ID=gene-L8R42_002073;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=L8R42_002073 DAFVNP010000029.1 Protein Homology CDS 15976 17079 . - 0 ID=cds-HBQ7390158.1;Parent=gene-L8R42_002073;Dbxref=NCBI_GP:HBQ7390158.1;Name=HBQ7390158.1;gbkey=CDS;gene=phnW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=L8R42_002073;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=HBQ7390158.1;transl_table=11 DAFVNP010000029.1 tpg gene 17219 17938 . + . ID=gene-L8R42_002074;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=L8R42_002074 DAFVNP010000029.1 Protein Homology CDS 17219 17938 . + 0 ID=cds-HBQ7390159.1;Parent=gene-L8R42_002074;Dbxref=NCBI_GP:HBQ7390159.1;Name=HBQ7390159.1;gbkey=CDS;gene=phnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=L8R42_002074;product=phosphonate utilization transcriptional regulator PhnR;protein_id=HBQ7390159.1;transl_table=11 DAFVNP010000029.1 tpg gene 18136 19149 . + . ID=gene-L8R42_002075;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=L8R42_002075 DAFVNP010000029.1 Protein Homology CDS 18136 19149 . + 0 ID=cds-HBQ7390160.1;Parent=gene-L8R42_002075;Dbxref=NCBI_GP:HBQ7390160.1;Name=HBQ7390160.1;gbkey=CDS;gene=phnS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=L8R42_002075;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=HBQ7390160.1;transl_table=11 DAFVNP010000029.1 tpg gene 19155 20264 . + . ID=gene-L8R42_002076;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=L8R42_002076 DAFVNP010000029.1 Protein Homology CDS 19155 20264 . + 0 ID=cds-HBQ7390161.1;Parent=gene-L8R42_002076;Dbxref=NCBI_GP:HBQ7390161.1;Name=HBQ7390161.1;gbkey=CDS;gene=phnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=L8R42_002076;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=HBQ7390161.1;transl_table=11 DAFVNP010000029.1 tpg gene 20267 21127 . + . ID=gene-L8R42_002077;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=L8R42_002077 DAFVNP010000029.1 Protein Homology CDS 20267 21127 . + 0 ID=cds-HBQ7390162.1;Parent=gene-L8R42_002077;Dbxref=NCBI_GP:HBQ7390162.1;Name=HBQ7390162.1;gbkey=CDS;gene=phnU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=L8R42_002077;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=HBQ7390162.1;transl_table=11 DAFVNP010000029.1 tpg gene 21130 21927 . + . ID=gene-L8R42_002078;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=L8R42_002078 DAFVNP010000029.1 Protein Homology CDS 21130 21927 . + 0 ID=cds-HBQ7390163.1;Parent=gene-L8R42_002078;Dbxref=NCBI_GP:HBQ7390163.1;Name=HBQ7390163.1;gbkey=CDS;gene=phnV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=L8R42_002078;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=HBQ7390163.1;transl_table=11 DAFVNP010000029.1 tpg gene 21971 23419 . - . ID=gene-L8R42_002079;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=L8R42_002079 DAFVNP010000029.1 Protein Homology CDS 21971 23419 . - 0 ID=cds-HBQ7390164.1;Parent=gene-L8R42_002079;Dbxref=NCBI_GP:HBQ7390164.1;Name=HBQ7390164.1;gbkey=CDS;gene=thiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=L8R42_002079;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=HBQ7390164.1;transl_table=11 DAFVNP010000029.1 tpg gene 23629 23871 . + . ID=gene-L8R42_002080;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=L8R42_002080 DAFVNP010000029.1 Protein Homology CDS 23629 23871 . + 0 ID=cds-HBQ7390165.1;Parent=gene-L8R42_002080;Dbxref=NCBI_GP:HBQ7390165.1;Name=HBQ7390165.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=L8R42_002080;product=exodeoxyribonuclease VII small subunit;protein_id=HBQ7390165.1;transl_table=11 DAFVNP010000029.1 tpg gene 23872 24771 . + . ID=gene-L8R42_002081;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=L8R42_002081 DAFVNP010000029.1 Protein Homology CDS 23872 24771 . + 0 ID=cds-HBQ7390166.1;Parent=gene-L8R42_002081;Dbxref=NCBI_GP:HBQ7390166.1;Name=HBQ7390166.1;gbkey=CDS;gene=ispA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=L8R42_002081;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=HBQ7390166.1;transl_table=11 DAFVNP010000029.1 tpg gene 24795 26657 . + . ID=gene-L8R42_002082;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=L8R42_002082 DAFVNP010000029.1 Protein Homology CDS 24795 26657 . + 0 ID=cds-HBQ7390167.1;Parent=gene-L8R42_002082;Dbxref=NCBI_GP:HBQ7390167.1;Name=HBQ7390167.1;gbkey=CDS;gene=dxs;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=L8R42_002082;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=HBQ7390167.1;transl_table=11 DAFVNP010000029.1 tpg gene 26714 27688 . + . ID=gene-L8R42_002083;Name=L8R42_002083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002083 DAFVNP010000029.1 Protein Homology CDS 26714 27688 . + 0 ID=cds-HBQ7390168.1;Parent=gene-L8R42_002083;Dbxref=NCBI_GP:HBQ7390168.1;Name=HBQ7390168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=L8R42_002083;product=aldo/keto reductase;protein_id=HBQ7390168.1;transl_table=11 DAFVNP010000029.1 tpg gene 27792 28307 . - . ID=gene-L8R42_002084;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=L8R42_002084 DAFVNP010000029.1 Protein Homology CDS 27792 28307 . - 0 ID=cds-HBQ7390169.1;Parent=gene-L8R42_002084;Dbxref=NCBI_GP:HBQ7390169.1;Name=HBQ7390169.1;gbkey=CDS;gene=pgpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=L8R42_002084;product=phosphatidylglycerophosphatase A;protein_id=HBQ7390169.1;transl_table=11 DAFVNP010000029.1 tpg gene 28285 29262 . - . ID=gene-L8R42_002085;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=L8R42_002085 DAFVNP010000029.1 Protein Homology CDS 28285 29262 . - 0 ID=cds-HBQ7390170.1;Parent=gene-L8R42_002085;Dbxref=NCBI_GP:HBQ7390170.1;Name=HBQ7390170.1;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459414.1;locus_tag=L8R42_002085;product=thiamine-phosphate kinase;protein_id=HBQ7390170.1;transl_table=11 DAFVNP010000029.1 tpg gene 29341 29760 . - . ID=gene-L8R42_002086;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=L8R42_002086 DAFVNP010000029.1 Protein Homology CDS 29341 29760 . - 0 ID=cds-HBQ7390171.1;Parent=gene-L8R42_002086;Dbxref=NCBI_GP:HBQ7390171.1;Name=HBQ7390171.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=L8R42_002086;product=transcription antitermination factor NusB;protein_id=HBQ7390171.1;transl_table=11 DAFVNP010000029.1 tpg gene 29781 30251 . - . ID=gene-L8R42_002087;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=L8R42_002087 DAFVNP010000029.1 Protein Homology CDS 29781 30251 . - 0 ID=cds-HBQ7390172.1;Parent=gene-L8R42_002087;Dbxref=NCBI_GP:HBQ7390172.1;Name=HBQ7390172.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=L8R42_002087;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=HBQ7390172.1;transl_table=11 DAFVNP010000029.1 tpg gene 30340 31443 . - . ID=gene-L8R42_002088;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=L8R42_002088 DAFVNP010000029.1 Protein Homology CDS 30340 31443 . - 0 ID=cds-HBQ7390173.1;Parent=gene-L8R42_002088;Dbxref=NCBI_GP:HBQ7390173.1;Name=HBQ7390173.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=L8R42_002088;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=HBQ7390173.1;transl_table=11 DAFVNP010000029.1 tpg gene 31447 31896 . - . ID=gene-L8R42_002089;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=L8R42_002089 DAFVNP010000029.1 Protein Homology CDS 31447 31896 . - 0 ID=cds-HBQ7390174.1;Parent=gene-L8R42_002089;Dbxref=NCBI_GP:HBQ7390174.1;Name=HBQ7390174.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=L8R42_002089;product=transcriptional regulator NrdR;protein_id=HBQ7390174.1;transl_table=11 DAFVNP010000029.1 tpg gene 32048 32587 . + . ID=gene-L8R42_002090;Name=L8R42_002090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002090 DAFVNP010000029.1 Protein Homology CDS 32048 32587 . + 0 ID=cds-HBQ7390175.1;Parent=gene-L8R42_002090;Dbxref=NCBI_GP:HBQ7390175.1;Name=HBQ7390175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=L8R42_002090;product=DUF3251 domain-containing protein;protein_id=HBQ7390175.1;transl_table=11 DAFVNP010000029.1 tpg gene 32887 33750 . + . ID=gene-L8R42_002091;Name=L8R42_002091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002091 DAFVNP010000029.1 Protein Homology CDS 32887 33750 . + 0 ID=cds-HBQ7390176.1;Parent=gene-L8R42_002091;Dbxref=NCBI_GP:HBQ7390176.1;Name=HBQ7390176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=L8R42_002091;product=nucleoside-specific channel-forming protein Tsx;protein_id=HBQ7390176.1;transl_table=11 DAFVNP010000029.1 tpg gene 33834 33941 . - . ID=gene-L8R42_002092;Name=L8R42_002092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002092 DAFVNP010000029.1 Protein Homology CDS 33834 33941 . - 0 ID=cds-HBQ7390177.1;Parent=gene-L8R42_002092;Dbxref=NCBI_GP:HBQ7390177.1;Name=HBQ7390177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=L8R42_002092;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=HBQ7390177.1;transl_table=11 DAFVNP010000029.1 tpg gene 34379 34726 . - . ID=gene-L8R42_002093;Name=L8R42_002093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002093 DAFVNP010000029.1 Protein Homology CDS 34379 34726 . - 0 ID=cds-HBQ7390178.1;Parent=gene-L8R42_002093;Dbxref=NCBI_GP:HBQ7390178.1;Name=HBQ7390178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=L8R42_002093;product=HNH nuclease family protein;protein_id=HBQ7390178.1;transl_table=11 DAFVNP010000029.1 tpg gene 34896 35588 . - . ID=gene-L8R42_002094;Name=L8R42_002094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002094 DAFVNP010000029.1 Protein Homology CDS 34896 35588 . - 0 ID=cds-HBQ7390179.1;Parent=gene-L8R42_002094;Dbxref=NCBI_GP:HBQ7390179.1;Name=HBQ7390179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=L8R42_002094;product=YafY family transcriptional regulator;protein_id=HBQ7390179.1;transl_table=11 DAFVNP010000029.1 tpg gene 35614 35979 . - . ID=gene-L8R42_002095;Name=L8R42_002095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002095 DAFVNP010000029.1 Protein Homology CDS 35614 35979 . - 0 ID=cds-HBQ7390180.1;Parent=gene-L8R42_002095;Dbxref=NCBI_GP:HBQ7390180.1;Name=HBQ7390180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=L8R42_002095;product=VOC family protein;protein_id=HBQ7390180.1;transl_table=11 DAFVNP010000029.1 tpg gene 36124 37095 . - . ID=gene-L8R42_002096;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=L8R42_002096 DAFVNP010000029.1 Protein Homology CDS 36124 37095 . - 0 ID=cds-HBQ7390181.1;Parent=gene-L8R42_002096;Dbxref=NCBI_GP:HBQ7390181.1;Name=HBQ7390181.1;gbkey=CDS;gene=secF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=L8R42_002096;product=protein translocase subunit SecF;protein_id=HBQ7390181.1;transl_table=11 DAFVNP010000029.1 tpg gene 37106 38953 . - . ID=gene-L8R42_002097;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=L8R42_002097 DAFVNP010000029.1 Protein Homology CDS 37106 38953 . - 0 ID=cds-HBQ7390182.1;Parent=gene-L8R42_002097;Dbxref=NCBI_GP:HBQ7390182.1;Name=HBQ7390182.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=L8R42_002097;product=protein translocase subunit SecD;protein_id=HBQ7390182.1;transl_table=11 DAFVNP010000029.1 tpg gene 38981 39313 . - . ID=gene-L8R42_002098;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=L8R42_002098 DAFVNP010000029.1 Protein Homology CDS 38981 39313 . - 0 ID=cds-HBQ7390183.1;Parent=gene-L8R42_002098;Dbxref=NCBI_GP:HBQ7390183.1;Name=HBQ7390183.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=L8R42_002098;product=preprotein translocase subunit YajC;protein_id=HBQ7390183.1;transl_table=11 DAFVNP010000029.1 tpg gene 39336 40463 . - . ID=gene-L8R42_002099;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=L8R42_002099 DAFVNP010000029.1 Protein Homology CDS 39336 40463 . - 0 ID=cds-HBQ7390184.1;Parent=gene-L8R42_002099;Dbxref=NCBI_GP:HBQ7390184.1;Name=HBQ7390184.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=L8R42_002099;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=HBQ7390184.1;transl_table=11 DAFVNP010000029.1 tpg gene 40660 41724 . - . ID=gene-L8R42_002100;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=L8R42_002100 DAFVNP010000029.1 Protein Homology CDS 40660 41724 . - 0 ID=cds-HBQ7390185.1;Parent=gene-L8R42_002100;Dbxref=NCBI_GP:HBQ7390185.1;Name=HBQ7390185.1;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=L8R42_002100;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=HBQ7390185.1;transl_table=11 DAFVNP010000029.1 tpg gene 41818 42399 . + . ID=gene-L8R42_002101;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=L8R42_002101 DAFVNP010000029.1 Protein Homology CDS 41818 42399 . + 0 ID=cds-HBQ7390186.1;Parent=gene-L8R42_002101;Dbxref=NCBI_GP:HBQ7390186.1;Name=HBQ7390186.1;gbkey=CDS;gene=acpH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=L8R42_002101;product=ACP phosphodiesterase;protein_id=HBQ7390186.1;transl_table=11 DAFVNP010000029.1 tpg gene 42609 43211 . + . ID=gene-L8R42_002102;Name=L8R42_002102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002102 DAFVNP010000029.1 Protein Homology CDS 42609 43211 . + 0 ID=cds-HBQ7390187.1;Parent=gene-L8R42_002102;Dbxref=NCBI_GP:HBQ7390187.1;Name=HBQ7390187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=L8R42_002102;product=peroxiredoxin;protein_id=HBQ7390187.1;transl_table=11 DAFVNP010000029.1 tpg gene 43283 45100 . - . ID=gene-L8R42_002103;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=L8R42_002103 DAFVNP010000029.1 Protein Homology CDS 43283 45100 . - 0 ID=cds-HBQ7390188.1;Parent=gene-L8R42_002103;Dbxref=NCBI_GP:HBQ7390188.1;Name=HBQ7390188.1;gbkey=CDS;gene=malZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=L8R42_002103;product=maltodextrin glucosidase;protein_id=HBQ7390188.1;transl_table=11 DAFVNP010000029.1 tpg gene 45262 46632 . - . ID=gene-L8R42_002104;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=L8R42_002104 DAFVNP010000029.1 Protein Homology CDS 45262 46632 . - 0 ID=cds-HBQ7390189.1;Parent=gene-L8R42_002104;Dbxref=NCBI_GP:HBQ7390189.1;Name=HBQ7390189.1;gbkey=CDS;gene=proY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=L8R42_002104;product=proline-specific permease ProY;protein_id=HBQ7390189.1;transl_table=11 DAFVNP010000029.1 tpg gene 46707 48026 . - . ID=gene-L8R42_002105;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=L8R42_002105 DAFVNP010000029.1 Protein Homology CDS 46707 48026 . - 0 ID=cds-HBQ7390190.1;Parent=gene-L8R42_002105;Dbxref=NCBI_GP:HBQ7390190.1;Name=HBQ7390190.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=L8R42_002105;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=HBQ7390190.1;transl_table=11 DAFVNP010000029.1 tpg gene 48435 49730 . - . ID=gene-L8R42_002106;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=L8R42_002106 DAFVNP010000029.1 Protein Homology CDS 48435 49730 . - 0 ID=cds-HBQ7390191.1;Parent=gene-L8R42_002106;Dbxref=NCBI_GP:HBQ7390191.1;Name=HBQ7390191.1;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=L8R42_002106;product=phosphate regulon sensor histidine kinase PhoR;protein_id=HBQ7390191.1;transl_table=11 DAFVNP010000029.1 tpg gene 49800 50489 . - . ID=gene-L8R42_002107;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=L8R42_002107 DAFVNP010000029.1 Protein Homology CDS 49800 50489 . - 0 ID=cds-HBQ7390192.1;Parent=gene-L8R42_002107;Dbxref=NCBI_GP:HBQ7390192.1;Name=HBQ7390192.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=L8R42_002107;product=phosphate response regulator transcription factor PhoB;protein_id=HBQ7390192.1;transl_table=11 ##sequence-region DAFVNP010000030.1 1 49857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000030.1 tpg region 1 49857 . + . ID=DAFVNP010000030.1:1..49857;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000030.1 tpg gene 1 509 . + . ID=gene-L8R42_002108;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=L8R42_002108;partial=true;start_range=.,1 DAFVNP010000030.1 Protein Homology CDS 1 509 . + 2 ID=cds-HBQ7390193.1;Parent=gene-L8R42_002108;Dbxref=NCBI_GP:HBQ7390193.1;Name=HBQ7390193.1;gbkey=CDS;gene=tssJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=L8R42_002108;partial=true;product=type VI secretion system lipoprotein TssJ;protein_id=HBQ7390193.1;start_range=.,1;transl_table=11 DAFVNP010000030.1 tpg gene 513 1856 . + . ID=gene-L8R42_002109;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=L8R42_002109 DAFVNP010000030.1 Protein Homology CDS 513 1856 . + 0 ID=cds-HBQ7390194.1;Parent=gene-L8R42_002109;Dbxref=NCBI_GP:HBQ7390194.1;Name=HBQ7390194.1;gbkey=CDS;gene=tssK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=L8R42_002109;product=type VI secretion system baseplate subunit TssK;protein_id=HBQ7390194.1;transl_table=11 DAFVNP010000030.1 tpg gene 1853 3157 . + . ID=gene-L8R42_002110;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=L8R42_002110 DAFVNP010000030.1 Protein Homology CDS 1853 3157 . + 0 ID=cds-HBQ7390195.1;Parent=gene-L8R42_002110;Dbxref=NCBI_GP:HBQ7390195.1;Name=HBQ7390195.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=L8R42_002110;product=type VI secretion system protein TssL%2C long form;protein_id=HBQ7390195.1;transl_table=11 DAFVNP010000030.1 tpg gene 3162 3935 . + . ID=gene-L8R42_002111;Name=L8R42_002111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002111 DAFVNP010000030.1 Protein Homology CDS 3162 3935 . + 0 ID=cds-HBQ7390196.1;Parent=gene-L8R42_002111;Dbxref=NCBI_GP:HBQ7390196.1;Name=HBQ7390196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=L8R42_002111;product=hypothetical protein;protein_id=HBQ7390196.1;transl_table=11 DAFVNP010000030.1 tpg gene 4138 4569 . + . ID=gene-L8R42_002112;Name=L8R42_002112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002112 DAFVNP010000030.1 Protein Homology CDS 4138 4569 . + 0 ID=cds-HBQ7390197.1;Parent=gene-L8R42_002112;Dbxref=NCBI_GP:HBQ7390197.1;Name=HBQ7390197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=L8R42_002112;product=Shiga toxin A subunit;protein_id=HBQ7390197.1;transl_table=11 DAFVNP010000030.1 tpg gene 4603 8496 . + . ID=gene-L8R42_002113;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=L8R42_002113 DAFVNP010000030.1 Protein Homology CDS 4603 8496 . + 0 ID=cds-HBQ7390198.1;Parent=gene-L8R42_002113;Dbxref=NCBI_GP:HBQ7390198.1;Name=HBQ7390198.1;gbkey=CDS;gene=tssM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=L8R42_002113;product=type VI secretion system membrane subunit TssM;protein_id=HBQ7390198.1;transl_table=11 DAFVNP010000030.1 tpg gene 8496 9263 . + . ID=gene-L8R42_002114;Name=L8R42_002114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002114 DAFVNP010000030.1 Protein Homology CDS 8496 9263 . + 0 ID=cds-HBQ7390199.1;Parent=gene-L8R42_002114;Dbxref=NCBI_GP:HBQ7390199.1;Name=HBQ7390199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=L8R42_002114;product=DUF2094 domain-containing protein;protein_id=HBQ7390199.1;transl_table=11 DAFVNP010000030.1 tpg gene 9306 9776 . + . ID=gene-L8R42_002115;Name=L8R42_002115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002115 DAFVNP010000030.1 Protein Homology CDS 9306 9776 . + 0 ID=cds-HBQ7390200.1;Parent=gene-L8R42_002115;Dbxref=NCBI_GP:HBQ7390200.1;Name=HBQ7390200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=L8R42_002115;product=glucosaminidase domain-containing protein;protein_id=HBQ7390200.1;transl_table=11 DAFVNP010000030.1 tpg gene 9761 10222 . + . ID=gene-L8R42_002116;Name=L8R42_002116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002116 DAFVNP010000030.1 Protein Homology CDS 9761 10222 . + 0 ID=cds-HBQ7390201.1;Parent=gene-L8R42_002116;Dbxref=NCBI_GP:HBQ7390201.1;Name=HBQ7390201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=L8R42_002116;product=hypothetical protein;protein_id=HBQ7390201.1;transl_table=11 DAFVNP010000030.1 tpg gene 10349 11050 . + . ID=gene-L8R42_002117;Name=L8R42_002117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002117 DAFVNP010000030.1 Protein Homology CDS 10349 11050 . + 0 ID=cds-HBQ7390202.1;Parent=gene-L8R42_002117;Dbxref=NCBI_GP:HBQ7390202.1;Name=HBQ7390202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043958.1;locus_tag=L8R42_002117;product=hypothetical protein;protein_id=HBQ7390202.1;transl_table=11 DAFVNP010000030.1 tpg gene 11052 11513 . + . ID=gene-L8R42_002118;Name=L8R42_002118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002118 DAFVNP010000030.1 Protein Homology CDS 11052 11513 . + 0 ID=cds-HBQ7390203.1;Parent=gene-L8R42_002118;Dbxref=NCBI_GP:HBQ7390203.1;Name=HBQ7390203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000275733.1;locus_tag=L8R42_002118;product=hypothetical protein;protein_id=HBQ7390203.1;transl_table=11 DAFVNP010000030.1 tpg gene 11545 13767 . + . ID=gene-L8R42_002119;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=L8R42_002119 DAFVNP010000030.1 Protein Homology CDS 11545 13767 . + 0 ID=cds-HBQ7390204.1;Parent=gene-L8R42_002119;Dbxref=NCBI_GP:HBQ7390204.1;Name=HBQ7390204.1;gbkey=CDS;gene=tssI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542647.1;locus_tag=L8R42_002119;product=type VI secretion system tip protein VgrG;protein_id=HBQ7390204.1;transl_table=11 DAFVNP010000030.1 tpg gene 13782 14213 . + . ID=gene-L8R42_002120;Name=L8R42_002120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002120 DAFVNP010000030.1 Protein Homology CDS 13782 14213 . + 0 ID=cds-HBQ7390205.1;Parent=gene-L8R42_002120;Dbxref=NCBI_GP:HBQ7390205.1;Name=HBQ7390205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199685.1;locus_tag=L8R42_002120;product=DUF1795 domain-containing protein;protein_id=HBQ7390205.1;transl_table=11 DAFVNP010000030.1 tpg pseudogene 14244 18377 . + . ID=gene-L8R42_002121;Name=L8R42_002121;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002121;pseudo=true DAFVNP010000030.1 Protein Homology CDS 14244 18377 . + 0 ID=cds-L8R42_002121;Parent=gene-L8R42_002121;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519082.1;locus_tag=L8R42_002121;product=PAAR domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000030.1 tpg gene 18782 19327 . + . ID=gene-L8R42_002122;Name=L8R42_002122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002122 DAFVNP010000030.1 Protein Homology CDS 18782 19327 . + 0 ID=cds-HBQ7390206.1;Parent=gene-L8R42_002122;Dbxref=NCBI_GP:HBQ7390206.1;Name=HBQ7390206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386342.1;locus_tag=L8R42_002122;product=hypothetical protein;protein_id=HBQ7390206.1;transl_table=11 DAFVNP010000030.1 tpg gene 19373 19942 . - . ID=gene-L8R42_002123;Name=L8R42_002123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002123 DAFVNP010000030.1 Protein Homology CDS 19373 19942 . - 0 ID=cds-HBQ7390207.1;Parent=gene-L8R42_002123;Dbxref=NCBI_GP:HBQ7390207.1;Name=HBQ7390207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246743.1;locus_tag=L8R42_002123;product=DUF4291 domain-containing protein;protein_id=HBQ7390207.1;transl_table=11 DAFVNP010000030.1 tpg gene 20656 21072 . + . ID=gene-L8R42_002124;Name=L8R42_002124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002124 DAFVNP010000030.1 Protein Homology CDS 20656 21072 . + 0 ID=cds-HBQ7390208.1;Parent=gene-L8R42_002124;Dbxref=NCBI_GP:HBQ7390208.1;Name=HBQ7390208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=L8R42_002124;product=DUF2195 family protein;protein_id=HBQ7390208.1;transl_table=11 DAFVNP010000030.1 tpg gene 21096 21617 . + . ID=gene-L8R42_002125;Name=L8R42_002125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002125 DAFVNP010000030.1 Protein Homology CDS 21096 21617 . + 0 ID=cds-HBQ7390209.1;Parent=gene-L8R42_002125;Dbxref=NCBI_GP:HBQ7390209.1;Name=HBQ7390209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=L8R42_002125;product=DUF2778 domain-containing protein;protein_id=HBQ7390209.1;transl_table=11 DAFVNP010000030.1 tpg gene 22014 24203 . + . ID=gene-L8R42_002126;Name=L8R42_002126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002126 DAFVNP010000030.1 Protein Homology CDS 22014 24203 . + 0 ID=cds-HBQ7390210.1;Parent=gene-L8R42_002126;Dbxref=NCBI_GP:HBQ7390210.1;Name=HBQ7390210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=L8R42_002126;product=type VI secretion system tip protein VgrG;protein_id=HBQ7390210.1;transl_table=11 DAFVNP010000030.1 tpg gene 24227 24673 . + . ID=gene-L8R42_002127;Name=L8R42_002127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002127 DAFVNP010000030.1 Protein Homology CDS 24227 24673 . + 0 ID=cds-HBQ7390211.1;Parent=gene-L8R42_002127;Dbxref=NCBI_GP:HBQ7390211.1;Name=HBQ7390211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=L8R42_002127;product=DcrB-related protein;protein_id=HBQ7390211.1;transl_table=11 DAFVNP010000030.1 tpg gene 24692 28825 . + . ID=gene-L8R42_002128;Name=L8R42_002128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002128 DAFVNP010000030.1 Protein Homology CDS 24692 28825 . + 0 ID=cds-HBQ7390212.1;Parent=gene-L8R42_002128;Dbxref=NCBI_GP:HBQ7390212.1;Name=HBQ7390212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=L8R42_002128;product=PAAR domain-containing protein;protein_id=HBQ7390212.1;transl_table=11 DAFVNP010000030.1 tpg gene 28839 29360 . + . ID=gene-L8R42_002129;Name=L8R42_002129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002129 DAFVNP010000030.1 Protein Homology CDS 28839 29360 . + 0 ID=cds-HBQ7390213.1;Parent=gene-L8R42_002129;Dbxref=NCBI_GP:HBQ7390213.1;Name=HBQ7390213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007873263.1;locus_tag=L8R42_002129;product=SMI1/KNR4 family protein;protein_id=HBQ7390213.1;transl_table=11 DAFVNP010000030.1 tpg pseudogene 29604 30128 . + . ID=gene-L8R42_002130;Name=L8R42_002130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002130;pseudo=true DAFVNP010000030.1 Protein Homology CDS 29604 30128 . + 0 ID=cds-L8R42_002130;Parent=gene-L8R42_002130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539107.1;locus_tag=L8R42_002130;product=DUF4329 domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000030.1 tpg gene 30147 30455 . + . ID=gene-L8R42_002131;Name=L8R42_002131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002131 DAFVNP010000030.1 Protein Homology CDS 30147 30455 . + 0 ID=cds-HBQ7390214.1;Parent=gene-L8R42_002131;Dbxref=NCBI_GP:HBQ7390214.1;Name=HBQ7390214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539109.1;locus_tag=L8R42_002131;product=hypothetical protein;protein_id=HBQ7390214.1;transl_table=11 DAFVNP010000030.1 tpg gene 30514 30771 . - . ID=gene-L8R42_002132;Name=L8R42_002132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002132 DAFVNP010000030.1 Protein Homology CDS 30514 30771 . - 0 ID=cds-HBQ7390215.1;Parent=gene-L8R42_002132;Dbxref=NCBI_GP:HBQ7390215.1;Name=HBQ7390215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=L8R42_002132;product=SymE family type I addiction module toxin;protein_id=HBQ7390215.1;transl_table=11 DAFVNP010000030.1 tpg pseudogene 31909 32215 . + . ID=gene-L8R42_002133;Name=L8R42_002133;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002133;pseudo=true DAFVNP010000030.1 Protein Homology CDS 31909 32215 . + 0 ID=cds-L8R42_002133;Parent=gene-L8R42_002133;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751277.1;locus_tag=L8R42_002133;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000030.1 tpg gene 32212 32679 . + . ID=gene-L8R42_002134;Name=L8R42_002134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002134 DAFVNP010000030.1 Protein Homology CDS 32212 32679 . + 0 ID=cds-HBQ7390216.1;Parent=gene-L8R42_002134;Dbxref=NCBI_GP:HBQ7390216.1;Name=HBQ7390216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=L8R42_002134;product=sugar tyrosine-protein kinase;protein_id=HBQ7390216.1;transl_table=11 DAFVNP010000030.1 tpg gene 32997 33275 . + . ID=gene-L8R42_002135;Name=L8R42_002135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002135 DAFVNP010000030.1 Protein Homology CDS 32997 33275 . + 0 ID=cds-HBQ7390217.1;Parent=gene-L8R42_002135;Dbxref=NCBI_GP:HBQ7390217.1;Name=HBQ7390217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=L8R42_002135;product=hypothetical protein;protein_id=HBQ7390217.1;transl_table=11 DAFVNP010000030.1 tpg gene 33342 33584 . - . ID=gene-L8R42_002136;Name=L8R42_002136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002136 DAFVNP010000030.1 Protein Homology CDS 33342 33584 . - 0 ID=cds-HBQ7390218.1;Parent=gene-L8R42_002136;Dbxref=NCBI_GP:HBQ7390218.1;Name=HBQ7390218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135374.1;locus_tag=L8R42_002136;product=SymE family type I addiction module toxin;protein_id=HBQ7390218.1;transl_table=11 DAFVNP010000030.1 tpg pseudogene 33709 34413 . + . ID=gene-L8R42_002137;Name=L8R42_002137;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002137;pseudo=true DAFVNP010000030.1 Protein Homology CDS 33709 34413 . + 0 ID=cds-L8R42_002137;Parent=gene-L8R42_002137;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=L8R42_002137;product=IS481 family transposase;pseudo=true;transl_table=11 DAFVNP010000030.1 tpg gene 35174 35671 . + . ID=gene-L8R42_002138;Name=L8R42_002138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002138 DAFVNP010000030.1 Protein Homology CDS 35174 35671 . + 0 ID=cds-HBQ7390219.1;Parent=gene-L8R42_002138;Dbxref=NCBI_GP:HBQ7390219.1;Name=HBQ7390219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=L8R42_002138;product=Saf-pilin pilus formation protein SafA;protein_id=HBQ7390219.1;transl_table=11 DAFVNP010000030.1 tpg gene 35746 36486 . + . ID=gene-L8R42_002139;Name=papD;gbkey=Gene;gene=papD;gene_biotype=protein_coding;locus_tag=L8R42_002139 DAFVNP010000030.1 Protein Homology CDS 35746 36486 . + 0 ID=cds-HBQ7390220.1;Parent=gene-L8R42_002139;Dbxref=NCBI_GP:HBQ7390220.1;Name=HBQ7390220.1;gbkey=CDS;gene=papD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=L8R42_002139;product=pili assembly chaperone PapD;protein_id=HBQ7390220.1;transl_table=11 DAFVNP010000030.1 tpg gene 36510 39020 . + . ID=gene-L8R42_002140;Name=L8R42_002140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002140 DAFVNP010000030.1 Protein Homology CDS 36510 39020 . + 0 ID=cds-HBQ7390221.1;Parent=gene-L8R42_002140;Dbxref=NCBI_GP:HBQ7390221.1;Name=HBQ7390221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=L8R42_002140;product=fimbrial biogenesis outer membrane usher protein;protein_id=HBQ7390221.1;transl_table=11 DAFVNP010000030.1 tpg gene 39042 39512 . + . ID=gene-L8R42_002141;Name=L8R42_002141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002141 DAFVNP010000030.1 Protein Homology CDS 39042 39512 . + 0 ID=cds-HBQ7390222.1;Parent=gene-L8R42_002141;Dbxref=NCBI_GP:HBQ7390222.1;Name=HBQ7390222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=L8R42_002141;product=pilin structural protein SafD;protein_id=HBQ7390222.1;transl_table=11 DAFVNP010000030.1 tpg gene 39920 40741 . + . ID=gene-L8R42_002142;Name=L8R42_002142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002142 DAFVNP010000030.1 Protein Homology CDS 39920 40741 . + 0 ID=cds-HBQ7390223.1;Parent=gene-L8R42_002142;Dbxref=NCBI_GP:HBQ7390223.1;Name=HBQ7390223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=L8R42_002142;product=polysaccharide deacetylase family protein;protein_id=HBQ7390223.1;transl_table=11 DAFVNP010000030.1 tpg pseudogene 40824 41064 . + . ID=gene-L8R42_002143;Name=L8R42_002143;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002143;pseudo=true DAFVNP010000030.1 Protein Homology CDS 40824 41064 . + 0 ID=cds-L8R42_002143;Parent=gene-L8R42_002143;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309415.1;locus_tag=L8R42_002143;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 DAFVNP010000030.1 tpg gene 41557 42504 . + . ID=gene-L8R42_002144;Name=L8R42_002144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002144 DAFVNP010000030.1 Protein Homology CDS 41557 42504 . + 0 ID=cds-HBQ7390224.1;Parent=gene-L8R42_002144;Dbxref=NCBI_GP:HBQ7390224.1;Name=HBQ7390224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=L8R42_002144;product=LysR family transcriptional regulator;protein_id=HBQ7390224.1;transl_table=11 DAFVNP010000030.1 tpg gene 42624 42749 . + . ID=gene-L8R42_002145;Name=L8R42_002145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002145 DAFVNP010000030.1 Protein Homology CDS 42624 42749 . + 0 ID=cds-HBQ7390225.1;Parent=gene-L8R42_002145;Dbxref=NCBI_GP:HBQ7390225.1;Name=HBQ7390225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505540.1;locus_tag=L8R42_002145;product=cytoplasmic protein;protein_id=HBQ7390225.1;transl_table=11 DAFVNP010000030.1 tpg pseudogene 42824 42985 . + . ID=gene-L8R42_002146;Name=L8R42_002146;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002146;pseudo=true DAFVNP010000030.1 Protein Homology CDS 42824 42985 . + 0 ID=cds-L8R42_002146;Parent=gene-L8R42_002146;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1;locus_tag=L8R42_002146;product=transposase;pseudo=true;transl_table=11 DAFVNP010000030.1 tpg pseudogene 43050 43736 . - . ID=gene-L8R42_002147;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=L8R42_002147;pseudo=true DAFVNP010000030.1 Protein Homology CDS 43050 43736 . - 0 ID=cds-L8R42_002147;Parent=gene-L8R42_002147;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=L8R42_002147;product=IS21-like element helper ATPase IstB;pseudo=true;transl_table=11 DAFVNP010000030.1 tpg gene 44643 45353 . + . ID=gene-L8R42_002148;Name=tcfA;gbkey=Gene;gene=tcfA;gene_biotype=protein_coding;locus_tag=L8R42_002148 DAFVNP010000030.1 Protein Homology CDS 44643 45353 . + 0 ID=cds-HBQ7390226.1;Parent=gene-L8R42_002148;Dbxref=NCBI_GP:HBQ7390226.1;Name=HBQ7390226.1;gbkey=CDS;gene=tcfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539136.1;locus_tag=L8R42_002148;product=fimbrial chaperone TcfA;protein_id=HBQ7390226.1;transl_table=11 DAFVNP010000030.1 tpg gene 45404 45979 . + . ID=gene-L8R42_002149;Name=tcfB;gbkey=Gene;gene=tcfB;gene_biotype=protein_coding;locus_tag=L8R42_002149 DAFVNP010000030.1 Protein Homology CDS 45404 45979 . + 0 ID=cds-HBQ7390227.1;Parent=gene-L8R42_002149;Dbxref=NCBI_GP:HBQ7390227.1;Name=HBQ7390227.1;gbkey=CDS;gene=tcfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001056553.1;locus_tag=L8R42_002149;product=fimbrial protein TcfB;protein_id=HBQ7390227.1;transl_table=11 DAFVNP010000030.1 tpg gene 46088 48775 . + . ID=gene-L8R42_002150;Name=tcfC;gbkey=Gene;gene=tcfC;gene_biotype=protein_coding;locus_tag=L8R42_002150 DAFVNP010000030.1 Protein Homology CDS 46088 48775 . + 0 ID=cds-HBQ7390228.1;Parent=gene-L8R42_002150;Dbxref=NCBI_GP:HBQ7390228.1;Name=HBQ7390228.1;gbkey=CDS;gene=tcfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092509.1;locus_tag=L8R42_002150;product=fimbrial outer membrane usher protein TcfC;protein_id=HBQ7390228.1;transl_table=11 DAFVNP010000030.1 tpg gene 48798 49857 . + . ID=gene-L8R42_002151;Name=tcfD;end_range=49857,.;gbkey=Gene;gene=tcfD;gene_biotype=protein_coding;locus_tag=L8R42_002151;partial=true DAFVNP010000030.1 Protein Homology CDS 48798 49857 . + 0 ID=cds-HBQ7390229.1;Parent=gene-L8R42_002151;Dbxref=NCBI_GP:HBQ7390229.1;Name=HBQ7390229.1;end_range=49857,.;gbkey=CDS;gene=tcfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066477.1;locus_tag=L8R42_002151;partial=true;product=fimbrial protein TcfD;protein_id=HBQ7390229.1;transl_table=11 ##sequence-region DAFVNP010000031.1 1 49071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000031.1 tpg region 1 49071 . + . ID=DAFVNP010000031.1:1..49071;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000031.1 tpg gene 32 1030 . + . ID=gene-L8R42_002152;Name=L8R42_002152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002152 DAFVNP010000031.1 Protein Homology CDS 32 1030 . + 0 ID=cds-HBQ7390230.1;Parent=gene-L8R42_002152;Dbxref=NCBI_GP:HBQ7390230.1;Name=HBQ7390230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=L8R42_002152;product=hypothetical protein;protein_id=HBQ7390230.1;transl_table=11 DAFVNP010000031.1 tpg gene 1033 1890 . + . ID=gene-L8R42_002153;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=L8R42_002153 DAFVNP010000031.1 Protein Homology CDS 1033 1890 . + 0 ID=cds-HBQ7390231.1;Parent=gene-L8R42_002153;Dbxref=NCBI_GP:HBQ7390231.1;Name=HBQ7390231.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=L8R42_002153;product=small-conductance mechanosensitive channel MscS;protein_id=HBQ7390231.1;transl_table=11 DAFVNP010000031.1 tpg gene 2006 4438 . - . ID=gene-L8R42_002154;Name=L8R42_002154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002154 DAFVNP010000031.1 Protein Homology CDS 2006 4438 . - 0 ID=cds-HBQ7390232.1;Parent=gene-L8R42_002154;Dbxref=NCBI_GP:HBQ7390232.1;Name=HBQ7390232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=L8R42_002154;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=HBQ7390232.1;transl_table=11 DAFVNP010000031.1 tpg gene 4441 5601 . - . ID=gene-L8R42_002155;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=L8R42_002155 DAFVNP010000031.1 Protein Homology CDS 4441 5601 . - 0 ID=cds-HBQ7390233.1;Parent=gene-L8R42_002155;Dbxref=NCBI_GP:HBQ7390233.1;Name=HBQ7390233.1;gbkey=CDS;gene=metB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=L8R42_002155;product=cystathionine gamma-synthase;protein_id=HBQ7390233.1;transl_table=11 DAFVNP010000031.1 tpg gene 5866 6183 . + . ID=gene-L8R42_002156;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=L8R42_002156 DAFVNP010000031.1 Protein Homology CDS 5866 6183 . + 0 ID=cds-HBQ7390234.1;Parent=gene-L8R42_002156;Dbxref=NCBI_GP:HBQ7390234.1;Name=HBQ7390234.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=L8R42_002156;product=met regulon transcriptional regulator MetJ;protein_id=HBQ7390234.1;transl_table=11 DAFVNP010000031.1 tpg gene 6640 8430 . + . ID=gene-L8R42_002157;Name=L8R42_002157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002157 DAFVNP010000031.1 Protein Homology CDS 6640 8430 . + 0 ID=cds-HBQ7390235.1;Parent=gene-L8R42_002157;Dbxref=NCBI_GP:HBQ7390235.1;Name=HBQ7390235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=L8R42_002157;product=aryl-sulfate sulfotransferase;protein_id=HBQ7390235.1;transl_table=11 DAFVNP010000031.1 tpg gene 8631 9293 . + . ID=gene-L8R42_002158;Name=L8R42_002158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002158 DAFVNP010000031.1 Protein Homology CDS 8631 9293 . + 0 ID=cds-HBQ7390236.1;Parent=gene-L8R42_002158;Dbxref=NCBI_GP:HBQ7390236.1;Name=HBQ7390236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=L8R42_002158;product=TIGR02117 family protein;protein_id=HBQ7390236.1;transl_table=11 DAFVNP010000031.1 tpg gene 9339 9551 . - . ID=gene-L8R42_002159;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=L8R42_002159 DAFVNP010000031.1 Protein Homology CDS 9339 9551 . - 0 ID=cds-HBQ7390237.1;Parent=gene-L8R42_002159;Dbxref=NCBI_GP:HBQ7390237.1;Name=HBQ7390237.1;gbkey=CDS;gene=rpmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=L8R42_002159;product=50S ribosomal protein L31;protein_id=HBQ7390237.1;transl_table=11 DAFVNP010000031.1 tpg gene 9755 11953 . + . ID=gene-L8R42_002160;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=L8R42_002160 DAFVNP010000031.1 Protein Homology CDS 9755 11953 . + 0 ID=cds-HBQ7390238.1;Parent=gene-L8R42_002160;Dbxref=NCBI_GP:HBQ7390238.1;Name=HBQ7390238.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=L8R42_002160;product=primosomal protein N';protein_id=HBQ7390238.1;transl_table=11 DAFVNP010000031.1 tpg gene 12108 13133 . + . ID=gene-L8R42_002161;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=L8R42_002161 DAFVNP010000031.1 Protein Homology CDS 12108 13133 . + 0 ID=cds-HBQ7390239.1;Parent=gene-L8R42_002161;Dbxref=NCBI_GP:HBQ7390239.1;Name=HBQ7390239.1;gbkey=CDS;gene=cytR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=L8R42_002161;product=DNA-binding transcriptional regulator CytR;protein_id=HBQ7390239.1;transl_table=11 DAFVNP010000031.1 tpg gene 13227 14201 . + . ID=gene-L8R42_002162;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=L8R42_002162 DAFVNP010000031.1 Protein Homology CDS 13227 14201 . + 0 ID=cds-HBQ7390240.1;Parent=gene-L8R42_002162;Dbxref=NCBI_GP:HBQ7390240.1;Name=HBQ7390240.1;gbkey=CDS;gene=ftsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=L8R42_002162;product=cell division protein FtsN;protein_id=HBQ7390240.1;transl_table=11 DAFVNP010000031.1 tpg gene 14293 14823 . + . ID=gene-L8R42_002163;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=L8R42_002163 DAFVNP010000031.1 Protein Homology CDS 14293 14823 . + 0 ID=cds-HBQ7390241.1;Parent=gene-L8R42_002163;Dbxref=NCBI_GP:HBQ7390241.1;Name=HBQ7390241.1;gbkey=CDS;gene=hslV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=L8R42_002163;product=ATP-dependent protease subunit HslV;protein_id=HBQ7390241.1;transl_table=11 DAFVNP010000031.1 tpg gene 14833 16164 . + . ID=gene-L8R42_002164;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=L8R42_002164 DAFVNP010000031.1 Protein Homology CDS 14833 16164 . + 0 ID=cds-HBQ7390242.1;Parent=gene-L8R42_002164;Dbxref=NCBI_GP:HBQ7390242.1;Name=HBQ7390242.1;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=L8R42_002164;product=HslU--HslV peptidase ATPase subunit;protein_id=HBQ7390242.1;transl_table=11 DAFVNP010000031.1 tpg gene 16231 17160 . + . ID=gene-L8R42_002165;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=L8R42_002165 DAFVNP010000031.1 Protein Homology CDS 16231 17160 . + 0 ID=cds-HBQ7390243.1;Parent=gene-L8R42_002165;Dbxref=NCBI_GP:HBQ7390243.1;Name=HBQ7390243.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=L8R42_002165;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=HBQ7390243.1;transl_table=11 DAFVNP010000031.1 tpg gene 17253 17738 . + . ID=gene-L8R42_002166;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=L8R42_002166 DAFVNP010000031.1 Protein Homology CDS 17253 17738 . + 0 ID=cds-HBQ7390244.1;Parent=gene-L8R42_002166;Dbxref=NCBI_GP:HBQ7390244.1;Name=HBQ7390244.1;gbkey=CDS;gene=rraA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=L8R42_002166;product=ribonuclease E activity regulator RraA;protein_id=HBQ7390244.1;transl_table=11 DAFVNP010000031.1 tpg gene 17960 18199 . - . ID=gene-L8R42_002167;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=L8R42_002167 DAFVNP010000031.1 Protein Homology CDS 17960 18199 . - 0 ID=cds-HBQ7390245.1;Parent=gene-L8R42_002167;Dbxref=NCBI_GP:HBQ7390245.1;Name=HBQ7390245.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=L8R42_002167;product=septal ring assembly protein ZapB;protein_id=HBQ7390245.1;transl_table=11 DAFVNP010000031.1 tpg gene 18598 19443 . + . ID=gene-L8R42_002168;Name=L8R42_002168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002168 DAFVNP010000031.1 Protein Homology CDS 18598 19443 . + 0 ID=cds-HBQ7390246.1;Parent=gene-L8R42_002168;Dbxref=NCBI_GP:HBQ7390246.1;Name=HBQ7390246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=L8R42_002168;product=aquaporin;protein_id=HBQ7390246.1;transl_table=11 DAFVNP010000031.1 tpg gene 19464 20972 . + . ID=gene-L8R42_002169;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=L8R42_002169 DAFVNP010000031.1 Protein Homology CDS 19464 20972 . + 0 ID=cds-HBQ7390247.1;Parent=gene-L8R42_002169;Dbxref=NCBI_GP:HBQ7390247.1;Name=HBQ7390247.1;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=L8R42_002169;product=glycerol kinase GlpK;protein_id=HBQ7390247.1;transl_table=11 DAFVNP010000031.1 tpg gene 21084 22094 . + . ID=gene-L8R42_002170;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=L8R42_002170 DAFVNP010000031.1 Protein Homology CDS 21084 22094 . + 0 ID=cds-HBQ7390248.1;Parent=gene-L8R42_002170;Dbxref=NCBI_GP:HBQ7390248.1;Name=HBQ7390248.1;gbkey=CDS;gene=glpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=L8R42_002170;product=class II fructose-bisphosphatase;protein_id=HBQ7390248.1;transl_table=11 DAFVNP010000031.1 tpg gene 22191 22937 . + . ID=gene-L8R42_002171;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=L8R42_002171 DAFVNP010000031.1 Protein Homology CDS 22191 22937 . + 0 ID=cds-HBQ7390249.1;Parent=gene-L8R42_002171;Dbxref=NCBI_GP:HBQ7390249.1;Name=HBQ7390249.1;gbkey=CDS;gene=fpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=L8R42_002171;product=ferredoxin--NADP(+) reductase;protein_id=HBQ7390249.1;transl_table=11 DAFVNP010000031.1 tpg gene 23044 23472 . - . ID=gene-L8R42_002172;Name=L8R42_002172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002172 DAFVNP010000031.1 Protein Homology CDS 23044 23472 . - 0 ID=cds-HBQ7390250.1;Parent=gene-L8R42_002172;Dbxref=NCBI_GP:HBQ7390250.1;Name=HBQ7390250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=L8R42_002172;product=DUF805 domain-containing protein;protein_id=HBQ7390250.1;transl_table=11 DAFVNP010000031.1 tpg gene 23573 24169 . + . ID=gene-L8R42_002173;Name=L8R42_002173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002173 DAFVNP010000031.1 Protein Homology CDS 23573 24169 . + 0 ID=cds-HBQ7390251.1;Parent=gene-L8R42_002173;Dbxref=NCBI_GP:HBQ7390251.1;Name=HBQ7390251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=L8R42_002173;product=YiiQ family protein;protein_id=HBQ7390251.1;transl_table=11 DAFVNP010000031.1 tpg gene 24282 25049 . + . ID=gene-L8R42_002174;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=L8R42_002174 DAFVNP010000031.1 Protein Homology CDS 24282 25049 . + 0 ID=cds-HBQ7390252.1;Parent=gene-L8R42_002174;Dbxref=NCBI_GP:HBQ7390252.1;Name=HBQ7390252.1;gbkey=CDS;gene=tpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=L8R42_002174;product=triose-phosphate isomerase;protein_id=HBQ7390252.1;transl_table=11 DAFVNP010000031.1 tpg gene 25141 25905 . - . ID=gene-L8R42_002175;Name=L8R42_002175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002175 DAFVNP010000031.1 Protein Homology CDS 25141 25905 . - 0 ID=cds-HBQ7390253.1;Parent=gene-L8R42_002175;Dbxref=NCBI_GP:HBQ7390253.1;Name=HBQ7390253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=L8R42_002175;product=epimerase;protein_id=HBQ7390253.1;transl_table=11 DAFVNP010000031.1 tpg gene 25915 26205 . - . ID=gene-L8R42_002176;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=L8R42_002176 DAFVNP010000031.1 Protein Homology CDS 25915 26205 . - 0 ID=cds-HBQ7390254.1;Parent=gene-L8R42_002176;Dbxref=NCBI_GP:HBQ7390254.1;Name=HBQ7390254.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=L8R42_002176;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=HBQ7390254.1;transl_table=11 DAFVNP010000031.1 tpg gene 26288 27163 . - . ID=gene-L8R42_002177;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=L8R42_002177 DAFVNP010000031.1 Protein Homology CDS 26288 27163 . - 0 ID=cds-HBQ7390255.1;Parent=gene-L8R42_002177;Dbxref=NCBI_GP:HBQ7390255.1;Name=HBQ7390255.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=L8R42_002177;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=HBQ7390255.1;transl_table=11 DAFVNP010000031.1 tpg gene 27192 28214 . - . ID=gene-L8R42_002178;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=L8R42_002178 DAFVNP010000031.1 Protein Homology CDS 27192 28214 . - 0 ID=cds-HBQ7390256.1;Parent=gene-L8R42_002178;Dbxref=NCBI_GP:HBQ7390256.1;Name=HBQ7390256.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=L8R42_002178;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=HBQ7390256.1;transl_table=11 DAFVNP010000031.1 tpg gene 28243 29241 . - . ID=gene-L8R42_002179;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=L8R42_002179 DAFVNP010000031.1 Protein Homology CDS 28243 29241 . - 0 ID=cds-HBQ7390257.1;Parent=gene-L8R42_002179;Dbxref=NCBI_GP:HBQ7390257.1;Name=HBQ7390257.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681907.1;locus_tag=L8R42_002179;product=autoinducer 2 ABC transporter permease LsrD;protein_id=HBQ7390257.1;transl_table=11 DAFVNP010000031.1 tpg gene 29241 30284 . - . ID=gene-L8R42_002180;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=L8R42_002180 DAFVNP010000031.1 Protein Homology CDS 29241 30284 . - 0 ID=cds-HBQ7390258.1;Parent=gene-L8R42_002180;Dbxref=NCBI_GP:HBQ7390258.1;Name=HBQ7390258.1;gbkey=CDS;gene=lsrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=L8R42_002180;product=autoinducer 2 ABC transporter permease LsrC;protein_id=HBQ7390258.1;transl_table=11 DAFVNP010000031.1 tpg gene 30278 31813 . - . ID=gene-L8R42_002181;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=L8R42_002181 DAFVNP010000031.1 Protein Homology CDS 30278 31813 . - 0 ID=cds-HBQ7390259.1;Parent=gene-L8R42_002181;Dbxref=NCBI_GP:HBQ7390259.1;Name=HBQ7390259.1;gbkey=CDS;gene=lsrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=L8R42_002181;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=HBQ7390259.1;transl_table=11 DAFVNP010000031.1 tpg gene 32069 33028 . + . ID=gene-L8R42_002182;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=L8R42_002182 DAFVNP010000031.1 Protein Homology CDS 32069 33028 . + 0 ID=cds-HBQ7390260.1;Parent=gene-L8R42_002182;Dbxref=NCBI_GP:HBQ7390260.1;Name=HBQ7390260.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=L8R42_002182;product=transcriptional regulator LsrR;protein_id=HBQ7390260.1;transl_table=11 DAFVNP010000031.1 tpg gene 33115 34707 . + . ID=gene-L8R42_002183;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=L8R42_002183 DAFVNP010000031.1 Protein Homology CDS 33115 34707 . + 0 ID=cds-HBQ7390261.1;Parent=gene-L8R42_002183;Dbxref=NCBI_GP:HBQ7390261.1;Name=HBQ7390261.1;gbkey=CDS;gene=lsrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=L8R42_002183;product=autoinducer-2 kinase;protein_id=HBQ7390261.1;transl_table=11 DAFVNP010000031.1 tpg gene 34721 35071 . + . ID=gene-L8R42_002184;Name=L8R42_002184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002184 DAFVNP010000031.1 Protein Homology CDS 34721 35071 . + 0 ID=cds-HBQ7390262.1;Parent=gene-L8R42_002184;Dbxref=NCBI_GP:HBQ7390262.1;Name=HBQ7390262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=L8R42_002184;product=cupin domain-containing protein;protein_id=HBQ7390262.1;transl_table=11 DAFVNP010000031.1 tpg pseudogene 35161 35301 . - . ID=gene-L8R42_002185;Name=L8R42_002185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002185;pseudo=true DAFVNP010000031.1 Protein Homology CDS 35161 35301 . - 0 ID=cds-L8R42_002185;Parent=gene-L8R42_002185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=L8R42_002185;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 DAFVNP010000031.1 tpg gene 35289 35477 . - . ID=gene-L8R42_002186;Name=L8R42_002186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002186 DAFVNP010000031.1 GeneMarkS-2+ CDS 35289 35477 . - 0 ID=cds-HBQ7390263.1;Parent=gene-L8R42_002186;Dbxref=NCBI_GP:HBQ7390263.1;Name=HBQ7390263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_002186;product=hypothetical protein;protein_id=HBQ7390263.1;transl_table=11 DAFVNP010000031.1 tpg gene 35575 36297 . - . ID=gene-L8R42_002187;Name=L8R42_002187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002187 DAFVNP010000031.1 Protein Homology CDS 35575 36297 . - 0 ID=cds-HBQ7390264.1;Parent=gene-L8R42_002187;Dbxref=NCBI_GP:HBQ7390264.1;Name=HBQ7390264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=L8R42_002187;product=GntR family transcriptional regulator;protein_id=HBQ7390264.1;transl_table=11 DAFVNP010000031.1 tpg gene 36360 37400 . - . ID=gene-L8R42_002188;Name=L8R42_002188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002188 DAFVNP010000031.1 Protein Homology CDS 36360 37400 . - 0 ID=cds-HBQ7390265.1;Parent=gene-L8R42_002188;Dbxref=NCBI_GP:HBQ7390265.1;Name=HBQ7390265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=L8R42_002188;product=ADP-ribosylglycohydrolase family protein;protein_id=HBQ7390265.1;transl_table=11 DAFVNP010000031.1 tpg gene 37410 38369 . - . ID=gene-L8R42_002189;Name=L8R42_002189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002189 DAFVNP010000031.1 Protein Homology CDS 37410 38369 . - 0 ID=cds-HBQ7390266.1;Parent=gene-L8R42_002189;Dbxref=NCBI_GP:HBQ7390266.1;Name=HBQ7390266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=L8R42_002189;product=aminoimidazole riboside kinase;protein_id=HBQ7390266.1;transl_table=11 DAFVNP010000031.1 tpg gene 38380 39714 . - . ID=gene-L8R42_002190;Name=L8R42_002190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002190 DAFVNP010000031.1 Protein Homology CDS 38380 39714 . - 0 ID=cds-HBQ7390267.1;Parent=gene-L8R42_002190;Dbxref=NCBI_GP:HBQ7390267.1;Name=HBQ7390267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=L8R42_002190;product=MFS transporter;protein_id=HBQ7390267.1;transl_table=11 DAFVNP010000031.1 tpg gene 39977 40732 . - . ID=gene-L8R42_002191;Name=L8R42_002191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002191 DAFVNP010000031.1 Protein Homology CDS 39977 40732 . - 0 ID=cds-HBQ7390268.1;Parent=gene-L8R42_002191;Dbxref=NCBI_GP:HBQ7390268.1;Name=HBQ7390268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=L8R42_002191;product=CDP-diacylglycerol diphosphatase;protein_id=HBQ7390268.1;transl_table=11 DAFVNP010000031.1 tpg gene 40833 41822 . - . ID=gene-L8R42_002192;Name=L8R42_002192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002192 DAFVNP010000031.1 Protein Homology CDS 40833 41822 . - 0 ID=cds-HBQ7390269.1;Parent=gene-L8R42_002192;Dbxref=NCBI_GP:HBQ7390269.1;Name=HBQ7390269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=L8R42_002192;product=sulfate ABC transporter substrate-binding protein;protein_id=HBQ7390269.1;transl_table=11 DAFVNP010000031.1 tpg gene 42026 42988 . - . ID=gene-L8R42_002193;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=L8R42_002193 DAFVNP010000031.1 Protein Homology CDS 42026 42988 . - 0 ID=cds-HBQ7390270.1;Parent=gene-L8R42_002193;Dbxref=NCBI_GP:HBQ7390270.1;Name=HBQ7390270.1;gbkey=CDS;gene=pfkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=L8R42_002193;product=6-phosphofructokinase;protein_id=HBQ7390270.1;transl_table=11 DAFVNP010000031.1 tpg gene 43173 44075 . - . ID=gene-L8R42_002194;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=L8R42_002194 DAFVNP010000031.1 Protein Homology CDS 43173 44075 . - 0 ID=cds-HBQ7390271.1;Parent=gene-L8R42_002194;Dbxref=NCBI_GP:HBQ7390271.1;Name=HBQ7390271.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;gbkey=CDS;gene=fieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=L8R42_002194;product=CDF family cation-efflux transporter FieF;protein_id=HBQ7390271.1;transl_table=11 DAFVNP010000031.1 tpg gene 44223 44723 . - . ID=gene-L8R42_002195;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=L8R42_002195 DAFVNP010000031.1 Protein Homology CDS 44223 44723 . - 0 ID=cds-HBQ7390272.1;Parent=gene-L8R42_002195;Dbxref=NCBI_GP:HBQ7390272.1;Name=HBQ7390272.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=L8R42_002195;product=cell-envelope stress modulator CpxP;protein_id=HBQ7390272.1;transl_table=11 DAFVNP010000031.1 tpg gene 44874 45572 . + . ID=gene-L8R42_002196;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=L8R42_002196 DAFVNP010000031.1 Protein Homology CDS 44874 45572 . + 0 ID=cds-HBQ7390273.1;Parent=gene-L8R42_002196;Dbxref=NCBI_GP:HBQ7390273.1;Name=HBQ7390273.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=L8R42_002196;product=envelope stress response regulator transcription factor CpxR;protein_id=HBQ7390273.1;transl_table=11 DAFVNP010000031.1 tpg gene 45569 46942 . + . ID=gene-L8R42_002197;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=L8R42_002197 DAFVNP010000031.1 Protein Homology CDS 45569 46942 . + 0 ID=cds-HBQ7390274.1;Parent=gene-L8R42_002197;Dbxref=NCBI_GP:HBQ7390274.1;Name=HBQ7390274.1;gbkey=CDS;gene=cpxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=L8R42_002197;product=envelope stress sensor histidine kinase CpxA;protein_id=HBQ7390274.1;transl_table=11 DAFVNP010000031.1 tpg gene 46993 47388 . - . ID=gene-L8R42_002198;Name=L8R42_002198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002198 DAFVNP010000031.1 Protein Homology CDS 46993 47388 . - 0 ID=cds-HBQ7390275.1;Parent=gene-L8R42_002198;Dbxref=NCBI_GP:HBQ7390275.1;Name=HBQ7390275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=L8R42_002198;product=nuclear transport factor 2 family protein;protein_id=HBQ7390275.1;transl_table=11 DAFVNP010000031.1 tpg gene 47400 48089 . - . ID=gene-L8R42_002199;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=L8R42_002199 DAFVNP010000031.1 Protein Homology CDS 47400 48089 . - 0 ID=cds-HBQ7390276.1;Parent=gene-L8R42_002199;Dbxref=NCBI_GP:HBQ7390276.1;Name=HBQ7390276.1;gbkey=CDS;gene=yiiM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=L8R42_002199;product=6-N-hydroxylaminopurine resistance protein;protein_id=HBQ7390276.1;transl_table=11 DAFVNP010000031.1 tpg gene 48159 48779 . - . ID=gene-L8R42_002200;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=L8R42_002200 DAFVNP010000031.1 Protein Homology CDS 48159 48779 . - 0 ID=cds-HBQ7390277.1;Parent=gene-L8R42_002200;Dbxref=NCBI_GP:HBQ7390277.1;Name=HBQ7390277.1;gbkey=CDS;gene=sodA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=L8R42_002200;product=superoxide dismutase [Mn];protein_id=HBQ7390277.1;transl_table=11 ##sequence-region DAFVNP010000032.1 1 48534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000032.1 tpg region 1 48534 . + . ID=DAFVNP010000032.1:1..48534;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000032.1 tpg gene 73 588 . - . ID=gene-L8R42_002201;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=L8R42_002201 DAFVNP010000032.1 Protein Homology CDS 73 588 . - 0 ID=cds-HBQ7390278.1;Parent=gene-L8R42_002201;Dbxref=NCBI_GP:HBQ7390278.1;Name=HBQ7390278.1;gbkey=CDS;gene=mobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=L8R42_002201;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=HBQ7390278.1;transl_table=11 DAFVNP010000032.1 tpg gene 585 1169 . - . ID=gene-L8R42_002202;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=L8R42_002202 DAFVNP010000032.1 Protein Homology CDS 585 1169 . - 0 ID=cds-HBQ7390279.1;Parent=gene-L8R42_002202;Dbxref=NCBI_GP:HBQ7390279.1;Name=HBQ7390279.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=L8R42_002202;product=molybdenum cofactor guanylyltransferase MobA;protein_id=HBQ7390279.1;transl_table=11 DAFVNP010000032.1 tpg gene 1239 1508 . + . ID=gene-L8R42_002203;Name=L8R42_002203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002203 DAFVNP010000032.1 Protein Homology CDS 1239 1508 . + 0 ID=cds-HBQ7390280.1;Parent=gene-L8R42_002203;Dbxref=NCBI_GP:HBQ7390280.1;Name=HBQ7390280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=L8R42_002203;product=YihD family protein;protein_id=HBQ7390280.1;transl_table=11 DAFVNP010000032.1 tpg gene 1585 2571 . + . ID=gene-L8R42_002204;Name=L8R42_002204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002204 DAFVNP010000032.1 Protein Homology CDS 1585 2571 . + 0 ID=cds-HBQ7390281.1;Parent=gene-L8R42_002204;Dbxref=NCBI_GP:HBQ7390281.1;Name=HBQ7390281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=L8R42_002204;product=serine/threonine protein kinase;protein_id=HBQ7390281.1;transl_table=11 DAFVNP010000032.1 tpg gene 2588 3211 . + . ID=gene-L8R42_002205;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=L8R42_002205 DAFVNP010000032.1 Protein Homology CDS 2588 3211 . + 0 ID=cds-HBQ7390282.1;Parent=gene-L8R42_002205;Dbxref=NCBI_GP:HBQ7390282.1;Name=HBQ7390282.1;gbkey=CDS;gene=dsbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=L8R42_002205;product=thiol:disulfide interchange protein DsbA;protein_id=HBQ7390282.1;transl_table=11 DAFVNP010000032.1 tpg gene 3224 4132 . - . ID=gene-L8R42_002206;Name=L8R42_002206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002206 DAFVNP010000032.1 Protein Homology CDS 3224 4132 . - 0 ID=cds-HBQ7390283.1;Parent=gene-L8R42_002206;Dbxref=NCBI_GP:HBQ7390283.1;Name=HBQ7390283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=L8R42_002206;product=acyltransferase;protein_id=HBQ7390283.1;transl_table=11 DAFVNP010000032.1 tpg gene 4520 7306 . + . ID=gene-L8R42_002207;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=L8R42_002207 DAFVNP010000032.1 Protein Homology CDS 4520 7306 . + 0 ID=cds-HBQ7390284.1;Parent=gene-L8R42_002207;Dbxref=NCBI_GP:HBQ7390284.1;Name=HBQ7390284.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=L8R42_002207;product=DNA polymerase I;protein_id=HBQ7390284.1;transl_table=11 DAFVNP010000032.1 tpg gene 7645 8280 . - . ID=gene-L8R42_002208;Name=L8R42_002208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002208 DAFVNP010000032.1 Protein Homology CDS 7645 8280 . - 0 ID=cds-HBQ7390285.1;Parent=gene-L8R42_002208;Dbxref=NCBI_GP:HBQ7390285.1;Name=HBQ7390285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=L8R42_002208;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=HBQ7390285.1;transl_table=11 DAFVNP010000032.1 tpg gene 8520 8744 . + . ID=gene-L8R42_002209;Name=L8R42_002209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002209 DAFVNP010000032.1 Protein Homology CDS 8520 8744 . + 0 ID=cds-HBQ7390286.1;Parent=gene-L8R42_002209;Dbxref=NCBI_GP:HBQ7390286.1;Name=HBQ7390286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=L8R42_002209;product=hypothetical protein;protein_id=HBQ7390286.1;transl_table=11 DAFVNP010000032.1 tpg gene 8863 9378 . + . ID=gene-L8R42_002210;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=L8R42_002210 DAFVNP010000032.1 Protein Homology CDS 8863 9378 . + 0 ID=cds-HBQ7390287.1;Parent=gene-L8R42_002210;Dbxref=NCBI_GP:HBQ7390287.1;Name=HBQ7390287.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=L8R42_002210;product=Der GTPase-activating protein YihI;protein_id=HBQ7390287.1;transl_table=11 DAFVNP010000032.1 tpg gene 9567 10940 . + . ID=gene-L8R42_002211;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=L8R42_002211 DAFVNP010000032.1 Protein Homology CDS 9567 10940 . + 0 ID=cds-HBQ7390288.1;Parent=gene-L8R42_002211;Dbxref=NCBI_GP:HBQ7390288.1;Name=HBQ7390288.1;gbkey=CDS;gene=hemN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=L8R42_002211;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=HBQ7390288.1;transl_table=11 DAFVNP010000032.1 tpg gene 11030 11140 . - . ID=gene-L8R42_002212;Name=L8R42_002212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002212 DAFVNP010000032.1 Protein Homology CDS 11030 11140 . - 0 ID=cds-HBQ7390289.1;Parent=gene-L8R42_002212;Dbxref=NCBI_GP:HBQ7390289.1;Name=HBQ7390289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=L8R42_002212;product=YshB family small membrane protein;protein_id=HBQ7390289.1;transl_table=11 DAFVNP010000032.1 tpg gene 11253 12662 . - . ID=gene-L8R42_002213;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=L8R42_002213 DAFVNP010000032.1 Protein Homology CDS 11253 12662 . - 0 ID=cds-HBQ7390290.1;Parent=gene-L8R42_002213;Dbxref=NCBI_GP:HBQ7390290.1;Name=HBQ7390290.1;gbkey=CDS;gene=glnG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=L8R42_002213;product=nitrogen regulation protein NR(I);protein_id=HBQ7390290.1;transl_table=11 DAFVNP010000032.1 tpg gene 12671 13720 . - . ID=gene-L8R42_002214;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=L8R42_002214 DAFVNP010000032.1 Protein Homology CDS 12671 13720 . - 0 ID=cds-HBQ7390291.1;Parent=gene-L8R42_002214;Dbxref=NCBI_GP:HBQ7390291.1;Name=HBQ7390291.1;gbkey=CDS;gene=glnL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=L8R42_002214;product=nitrogen regulation protein NR(II);protein_id=HBQ7390291.1;transl_table=11 DAFVNP010000032.1 tpg gene 13995 15404 . - . ID=gene-L8R42_002215;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=L8R42_002215 DAFVNP010000032.1 Protein Homology CDS 13995 15404 . - 0 ID=cds-HBQ7390292.1;Parent=gene-L8R42_002215;Dbxref=NCBI_GP:HBQ7390292.1;Name=HBQ7390292.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=L8R42_002215;product=glutamate--ammonia ligase;protein_id=HBQ7390292.1;transl_table=11 DAFVNP010000032.1 tpg gene 15780 17603 . + . ID=gene-L8R42_002216;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=L8R42_002216 DAFVNP010000032.1 Protein Homology CDS 15780 17603 . + 0 ID=cds-HBQ7390293.1;Parent=gene-L8R42_002216;Dbxref=NCBI_GP:HBQ7390293.1;Name=HBQ7390293.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=L8R42_002216;product=ribosome-dependent GTPase TypA;protein_id=HBQ7390293.1;transl_table=11 DAFVNP010000032.1 tpg gene 17658 18392 . - . ID=gene-L8R42_002217;Name=L8R42_002217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002217 DAFVNP010000032.1 Protein Homology CDS 17658 18392 . - 0 ID=cds-HBQ7390294.1;Parent=gene-L8R42_002217;Dbxref=NCBI_GP:HBQ7390294.1;Name=HBQ7390294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=L8R42_002217;product=HAD family phosphatase;protein_id=HBQ7390294.1;transl_table=11 DAFVNP010000032.1 tpg gene 18377 19255 . - . ID=gene-L8R42_002218;Name=L8R42_002218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002218 DAFVNP010000032.1 Protein Homology CDS 18377 19255 . - 0 ID=cds-HBQ7390295.1;Parent=gene-L8R42_002218;Dbxref=NCBI_GP:HBQ7390295.1;Name=HBQ7390295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=L8R42_002218;product=STM4011 family radical SAM protein;protein_id=HBQ7390295.1;transl_table=11 DAFVNP010000032.1 tpg gene 19252 20493 . - . ID=gene-L8R42_002219;Name=L8R42_002219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002219 DAFVNP010000032.1 Protein Homology CDS 19252 20493 . - 0 ID=cds-HBQ7390296.1;Parent=gene-L8R42_002219;Dbxref=NCBI_GP:HBQ7390296.1;Name=HBQ7390296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=L8R42_002219;product=STM4012 family radical SAM protein;protein_id=HBQ7390296.1;transl_table=11 DAFVNP010000032.1 tpg gene 20495 21370 . - . ID=gene-L8R42_002220;Name=L8R42_002220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002220 DAFVNP010000032.1 Protein Homology CDS 20495 21370 . - 0 ID=cds-HBQ7390297.1;Parent=gene-L8R42_002220;Dbxref=NCBI_GP:HBQ7390297.1;Name=HBQ7390297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=L8R42_002220;product=STM4013/SEN3800 family hydrolase;protein_id=HBQ7390297.1;transl_table=11 DAFVNP010000032.1 tpg gene 21363 22388 . - . ID=gene-L8R42_002221;Name=L8R42_002221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002221 DAFVNP010000032.1 Protein Homology CDS 21363 22388 . - 0 ID=cds-HBQ7390298.1;Parent=gene-L8R42_002221;Dbxref=NCBI_GP:HBQ7390298.1;Name=HBQ7390298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=L8R42_002221;product=STM4014 family protein;protein_id=HBQ7390298.1;transl_table=11 DAFVNP010000032.1 tpg gene 22401 23249 . - . ID=gene-L8R42_002222;Name=L8R42_002222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002222 DAFVNP010000032.1 Protein Homology CDS 22401 23249 . - 0 ID=cds-HBQ7390299.1;Parent=gene-L8R42_002222;Dbxref=NCBI_GP:HBQ7390299.1;Name=HBQ7390299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=L8R42_002222;product=STM4015 family protein;protein_id=HBQ7390299.1;transl_table=11 DAFVNP010000032.1 tpg gene 23406 24098 . - . ID=gene-L8R42_002223;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=L8R42_002223 DAFVNP010000032.1 Protein Homology CDS 23406 24098 . - 0 ID=cds-HBQ7390300.1;Parent=gene-L8R42_002223;Dbxref=NCBI_GP:HBQ7390300.1;Name=HBQ7390300.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=L8R42_002223;product=porin OmpL;protein_id=HBQ7390300.1;transl_table=11 DAFVNP010000032.1 tpg gene 24166 25587 . - . ID=gene-L8R42_002224;Name=L8R42_002224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002224 DAFVNP010000032.1 Protein Homology CDS 24166 25587 . - 0 ID=cds-HBQ7390301.1;Parent=gene-L8R42_002224;Dbxref=NCBI_GP:HBQ7390301.1;Name=HBQ7390301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=L8R42_002224;product=MFS transporter;protein_id=HBQ7390301.1;transl_table=11 DAFVNP010000032.1 tpg gene 25633 27015 . - . ID=gene-L8R42_002225;Name=L8R42_002225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002225 DAFVNP010000032.1 Protein Homology CDS 25633 27015 . - 0 ID=cds-HBQ7390302.1;Parent=gene-L8R42_002225;Dbxref=NCBI_GP:HBQ7390302.1;Name=HBQ7390302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=L8R42_002225;product=MFS transporter;protein_id=HBQ7390302.1;transl_table=11 DAFVNP010000032.1 tpg gene 27061 29097 . - . ID=gene-L8R42_002226;Name=L8R42_002226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002226 DAFVNP010000032.1 Protein Homology CDS 27061 29097 . - 0 ID=cds-HBQ7390303.1;Parent=gene-L8R42_002226;Dbxref=NCBI_GP:HBQ7390303.1;Name=HBQ7390303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=L8R42_002226;product=alpha-glucosidase;protein_id=HBQ7390303.1;transl_table=11 DAFVNP010000032.1 tpg gene 29141 29998 . - . ID=gene-L8R42_002227;Name=L8R42_002227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002227 DAFVNP010000032.1 Protein Homology CDS 29141 29998 . - 0 ID=cds-HBQ7390304.1;Parent=gene-L8R42_002227;Dbxref=NCBI_GP:HBQ7390304.1;Name=HBQ7390304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=L8R42_002227;product=aldose-1-epimerase;protein_id=HBQ7390304.1;transl_table=11 DAFVNP010000032.1 tpg gene 30002 31243 . - . ID=gene-L8R42_002228;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=L8R42_002228 DAFVNP010000032.1 Protein Homology CDS 30002 31243 . - 0 ID=cds-HBQ7390305.1;Parent=gene-L8R42_002228;Dbxref=NCBI_GP:HBQ7390305.1;Name=HBQ7390305.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=L8R42_002228;product=sulfoquinovose isomerase;protein_id=HBQ7390305.1;transl_table=11 DAFVNP010000032.1 tpg gene 31259 32137 . - . ID=gene-L8R42_002229;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=L8R42_002229 DAFVNP010000032.1 Protein Homology CDS 31259 32137 . - 0 ID=cds-HBQ7390306.1;Parent=gene-L8R42_002229;Dbxref=NCBI_GP:HBQ7390306.1;Name=HBQ7390306.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=L8R42_002229;product=sulfofructosephosphate aldolase;protein_id=HBQ7390306.1;transl_table=11 DAFVNP010000032.1 tpg gene 32160 33056 . - . ID=gene-L8R42_002230;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=L8R42_002230 DAFVNP010000032.1 Protein Homology CDS 32160 33056 . - 0 ID=cds-HBQ7390307.1;Parent=gene-L8R42_002230;Dbxref=NCBI_GP:HBQ7390307.1;Name=HBQ7390307.1;gbkey=CDS;gene=yihU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=L8R42_002230;product=sulfolactaldehyde 3-reductase;protein_id=HBQ7390307.1;transl_table=11 DAFVNP010000032.1 tpg gene 33221 34117 . + . ID=gene-L8R42_002231;Name=L8R42_002231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002231 DAFVNP010000032.1 Protein Homology CDS 33221 34117 . + 0 ID=cds-HBQ7390308.1;Parent=gene-L8R42_002231;Dbxref=NCBI_GP:HBQ7390308.1;Name=HBQ7390308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=L8R42_002231;product=sugar kinase;protein_id=HBQ7390308.1;transl_table=11 DAFVNP010000032.1 tpg gene 34151 34954 . + . ID=gene-L8R42_002232;Name=L8R42_002232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002232 DAFVNP010000032.1 Protein Homology CDS 34151 34954 . + 0 ID=cds-HBQ7390309.1;Parent=gene-L8R42_002232;Dbxref=NCBI_GP:HBQ7390309.1;Name=HBQ7390309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=L8R42_002232;product=DeoR/GlpR transcriptional regulator;protein_id=HBQ7390309.1;transl_table=11 DAFVNP010000032.1 tpg gene 35145 35744 . + . ID=gene-L8R42_002233;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=L8R42_002233 DAFVNP010000032.1 Protein Homology CDS 35145 35744 . + 0 ID=cds-HBQ7390310.1;Parent=gene-L8R42_002233;Dbxref=NCBI_GP:HBQ7390310.1;Name=HBQ7390310.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=L8R42_002233;product=glucose-1-phosphatase;protein_id=HBQ7390310.1;transl_table=11 DAFVNP010000032.1 tpg gene 35738 36610 . + . ID=gene-L8R42_002234;Name=L8R42_002234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002234 DAFVNP010000032.1 Protein Homology CDS 35738 36610 . + 0 ID=cds-HBQ7390311.1;Parent=gene-L8R42_002234;Dbxref=NCBI_GP:HBQ7390311.1;Name=HBQ7390311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=L8R42_002234;product=virulence factor BrkB family protein;protein_id=HBQ7390311.1;transl_table=11 DAFVNP010000032.1 tpg gene 36607 37044 . + . ID=gene-L8R42_002235;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=L8R42_002235 DAFVNP010000032.1 Protein Homology CDS 36607 37044 . + 0 ID=cds-HBQ7390312.1;Parent=gene-L8R42_002235;Dbxref=NCBI_GP:HBQ7390312.1;Name=HBQ7390312.1;gbkey=CDS;gene=dtd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=L8R42_002235;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=HBQ7390312.1;transl_table=11 DAFVNP010000032.1 tpg gene 37089 38030 . + . ID=gene-L8R42_002236;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=L8R42_002236 DAFVNP010000032.1 Protein Homology CDS 37089 38030 . + 0 ID=cds-HBQ7390313.1;Parent=gene-L8R42_002236;Dbxref=NCBI_GP:HBQ7390313.1;Name=HBQ7390313.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=L8R42_002236;product=fatty acid biosynthesis protein FabY;protein_id=HBQ7390313.1;transl_table=11 DAFVNP010000032.1 tpg gene 38045 38491 . - . ID=gene-L8R42_002237;Name=L8R42_002237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002237 DAFVNP010000032.1 Protein Homology CDS 38045 38491 . - 0 ID=cds-HBQ7390314.1;Parent=gene-L8R42_002237;Dbxref=NCBI_GP:HBQ7390314.1;Name=HBQ7390314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=L8R42_002237;product=type II toxin-antitoxin system HigA family antitoxin;protein_id=HBQ7390314.1;transl_table=11 DAFVNP010000032.1 tpg gene 38488 38799 . - . ID=gene-L8R42_002238;Name=L8R42_002238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002238 DAFVNP010000032.1 Protein Homology CDS 38488 38799 . - 0 ID=cds-HBQ7390315.1;Parent=gene-L8R42_002238;Dbxref=NCBI_GP:HBQ7390315.1;Name=HBQ7390315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=L8R42_002238;product=type II toxin-antitoxin system HigB family toxin;protein_id=HBQ7390315.1;transl_table=11 DAFVNP010000032.1 tpg gene 38885 39814 . - . ID=gene-L8R42_002239;Name=L8R42_002239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002239 DAFVNP010000032.1 Protein Homology CDS 38885 39814 . - 0 ID=cds-HBQ7390316.1;Parent=gene-L8R42_002239;Dbxref=NCBI_GP:HBQ7390316.1;Name=HBQ7390316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=L8R42_002239;product=alpha/beta hydrolase;protein_id=HBQ7390316.1;transl_table=11 DAFVNP010000032.1 tpg gene 40032 40343 . + . ID=gene-L8R42_002240;Name=L8R42_002240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002240 DAFVNP010000032.1 Protein Homology CDS 40032 40343 . + 0 ID=cds-HBQ7390317.1;Parent=gene-L8R42_002240;Dbxref=NCBI_GP:HBQ7390317.1;Name=HBQ7390317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=L8R42_002240;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HBQ7390317.1;transl_table=11 DAFVNP010000032.1 tpg gene 40344 40634 . + . ID=gene-L8R42_002241;Name=L8R42_002241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002241 DAFVNP010000032.1 Protein Homology CDS 40344 40634 . + 0 ID=cds-HBQ7390318.1;Parent=gene-L8R42_002241;Dbxref=NCBI_GP:HBQ7390318.1;Name=HBQ7390318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=L8R42_002241;product=DNA-binding transcriptional regulator;protein_id=HBQ7390318.1;transl_table=11 DAFVNP010000032.1 tpg gene 40681 41610 . - . ID=gene-L8R42_002242;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=L8R42_002242 DAFVNP010000032.1 Protein Homology CDS 40681 41610 . - 0 ID=cds-HBQ7390319.1;Parent=gene-L8R42_002242;Dbxref=NCBI_GP:HBQ7390319.1;Name=HBQ7390319.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=L8R42_002242;product=formate dehydrogenase accessory protein FdhE;protein_id=HBQ7390319.1;transl_table=11 DAFVNP010000032.1 tpg gene 41607 42242 . - . ID=gene-L8R42_002243;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=L8R42_002243 DAFVNP010000032.1 Protein Homology CDS 41607 42242 . - 0 ID=cds-HBQ7390320.1;Parent=gene-L8R42_002243;Dbxref=NCBI_GP:HBQ7390320.1;Name=HBQ7390320.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=L8R42_002243;product=formate dehydrogenase cytochrome b556 subunit;protein_id=HBQ7390320.1;transl_table=11 DAFVNP010000032.1 tpg gene 42239 43141 . - . ID=gene-L8R42_002244;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=L8R42_002244 DAFVNP010000032.1 Protein Homology CDS 42239 43141 . - 0 ID=cds-HBQ7390321.1;Parent=gene-L8R42_002244;Dbxref=NCBI_GP:HBQ7390321.1;Name=HBQ7390321.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=L8R42_002244;product=formate dehydrogenase subunit beta;protein_id=HBQ7390321.1;transl_table=11 DAFVNP010000032.1 tpg gene 43154 46204 . - . ID=gene-L8R42_002245;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=L8R42_002245 DAFVNP010000032.1 Protein Homology CDS 43154 46204 . - 0 ID=cds-HBQ7390322.1;Parent=gene-L8R42_002245;Dbxref=NCBI_GP:HBQ7390322.1;Name=HBQ7390322.1;gbkey=CDS;gene=fdnG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=L8R42_002245;product=formate dehydrogenase-N subunit alpha;protein_id=HBQ7390322.1;transl_except=(pos:complement(45617..45619)%2Caa:Sec);transl_table=11 DAFVNP010000032.1 tpg gene 46399 47235 . + . ID=gene-L8R42_002246;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=L8R42_002246 DAFVNP010000032.1 Protein Homology CDS 46399 47235 . + 0 ID=cds-HBQ7390323.1;Parent=gene-L8R42_002246;Dbxref=NCBI_GP:HBQ7390323.1;Name=HBQ7390323.1;gbkey=CDS;gene=fdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=L8R42_002246;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=HBQ7390323.1;transl_table=11 DAFVNP010000032.1 tpg gene 47503 48534 . - . ID=gene-L8R42_002247;Name=L8R42_002247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002247 DAFVNP010000032.1 Protein Homology CDS 47503 48534 . - 0 ID=cds-HBQ7390324.1;Parent=gene-L8R42_002247;Dbxref=NCBI_GP:HBQ7390324.1;Name=HBQ7390324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=L8R42_002247;product=YiiG family protein;protein_id=HBQ7390324.1;transl_table=11 ##sequence-region DAFVNP010000033.1 1 47629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000033.1 tpg region 1 47629 . + . ID=DAFVNP010000033.1:1..47629;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000033.1 tpg gene 1 241 . + . ID=gene-L8R42_002248;Name=L8R42_002248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002248;partial=true;start_range=.,1 DAFVNP010000033.1 Protein Homology CDS 1 241 . + 1 ID=cds-HBQ7390325.1;Parent=gene-L8R42_002248;Dbxref=NCBI_GP:HBQ7390325.1;Name=HBQ7390325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000009017.1;locus_tag=L8R42_002248;partial=true;product=cupin domain-containing protein;protein_id=HBQ7390325.1;start_range=.,1;transl_table=11 DAFVNP010000033.1 tpg gene 249 1685 . + . ID=gene-L8R42_002249;Name=L8R42_002249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002249 DAFVNP010000033.1 Protein Homology CDS 249 1685 . + 0 ID=cds-HBQ7390326.1;Parent=gene-L8R42_002249;Dbxref=NCBI_GP:HBQ7390326.1;Name=HBQ7390326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790543.1;locus_tag=L8R42_002249;product=phosphomannomutase;protein_id=HBQ7390326.1;transl_table=11 DAFVNP010000033.1 tpg gene 1764 3194 . + . ID=gene-L8R42_002250;Name=L8R42_002250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002250 DAFVNP010000033.1 Protein Homology CDS 1764 3194 . + 0 ID=cds-HBQ7390327.1;Parent=gene-L8R42_002250;Dbxref=NCBI_GP:HBQ7390327.1;Name=HBQ7390327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=L8R42_002250;product=undecaprenyl-phosphate galactose phosphotransferase WbaP;protein_id=HBQ7390327.1;transl_table=11 DAFVNP010000033.1 tpg gene 3358 4764 . + . ID=gene-L8R42_002251;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=L8R42_002251 DAFVNP010000033.1 Protein Homology CDS 3358 4764 . + 0 ID=cds-HBQ7390328.1;Parent=gene-L8R42_002251;Dbxref=NCBI_GP:HBQ7390328.1;Name=HBQ7390328.1;gbkey=CDS;gene=gndA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=L8R42_002251;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=HBQ7390328.1;transl_table=11 DAFVNP010000033.1 tpg gene 5001 6167 . + . ID=gene-L8R42_002252;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=L8R42_002252 DAFVNP010000033.1 Protein Homology CDS 5001 6167 . + 0 ID=cds-HBQ7390329.1;Parent=gene-L8R42_002252;Dbxref=NCBI_GP:HBQ7390329.1;Name=HBQ7390329.1;gbkey=CDS;gene=ugd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=L8R42_002252;product=UDP-glucose 6-dehydrogenase;protein_id=HBQ7390329.1;transl_table=11 DAFVNP010000033.1 tpg gene 6310 7293 . + . ID=gene-L8R42_002253;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=L8R42_002253 DAFVNP010000033.1 Protein Homology CDS 6310 7293 . + 0 ID=cds-HBQ7390330.1;Parent=gene-L8R42_002253;Dbxref=NCBI_GP:HBQ7390330.1;Name=HBQ7390330.1;gbkey=CDS;gene=wzzB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=L8R42_002253;product=LPS O-antigen chain length determinant protein WzzB;protein_id=HBQ7390330.1;transl_table=11 DAFVNP010000033.1 tpg gene 7374 7985 . - . ID=gene-L8R42_002254;Name=L8R42_002254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002254 DAFVNP010000033.1 Protein Homology CDS 7374 7985 . - 0 ID=cds-HBQ7390331.1;Parent=gene-L8R42_002254;Dbxref=NCBI_GP:HBQ7390331.1;Name=HBQ7390331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=L8R42_002254;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=HBQ7390331.1;transl_table=11 DAFVNP010000033.1 tpg gene 7979 8755 . - . ID=gene-L8R42_002255;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=L8R42_002255 DAFVNP010000033.1 Protein Homology CDS 7979 8755 . - 0 ID=cds-HBQ7390332.1;Parent=gene-L8R42_002255;Dbxref=NCBI_GP:HBQ7390332.1;Name=HBQ7390332.1;gbkey=CDS;gene=hisF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=L8R42_002255;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=HBQ7390332.1;transl_table=11 DAFVNP010000033.1 tpg gene 8737 9474 . - . ID=gene-L8R42_002256;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=L8R42_002256 DAFVNP010000033.1 Protein Homology CDS 8737 9474 . - 0 ID=cds-HBQ7390333.1;Parent=gene-L8R42_002256;Dbxref=NCBI_GP:HBQ7390333.1;Name=HBQ7390333.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=L8R42_002256;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=HBQ7390333.1;transl_table=11 DAFVNP010000033.1 tpg gene 9474 10064 . - . ID=gene-L8R42_002257;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=L8R42_002257 DAFVNP010000033.1 Protein Homology CDS 9474 10064 . - 0 ID=cds-HBQ7390334.1;Parent=gene-L8R42_002257;Dbxref=NCBI_GP:HBQ7390334.1;Name=HBQ7390334.1;gbkey=CDS;gene=hisH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=L8R42_002257;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=HBQ7390334.1;transl_table=11 DAFVNP010000033.1 tpg gene 10064 11131 . - . ID=gene-L8R42_002258;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=L8R42_002258 DAFVNP010000033.1 Protein Homology CDS 10064 11131 . - 0 ID=cds-HBQ7390335.1;Parent=gene-L8R42_002258;Dbxref=NCBI_GP:HBQ7390335.1;Name=HBQ7390335.1;gbkey=CDS;gene=hisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=L8R42_002258;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=HBQ7390335.1;transl_table=11 DAFVNP010000033.1 tpg gene 11128 12207 . - . ID=gene-L8R42_002259;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=L8R42_002259 DAFVNP010000033.1 Protein Homology CDS 11128 12207 . - 0 ID=cds-HBQ7390336.1;Parent=gene-L8R42_002259;Dbxref=NCBI_GP:HBQ7390336.1;Name=HBQ7390336.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=L8R42_002259;product=histidinol-phosphate transaminase;protein_id=HBQ7390336.1;transl_table=11 DAFVNP010000033.1 tpg gene 12204 13508 . - . ID=gene-L8R42_002260;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=L8R42_002260 DAFVNP010000033.1 Protein Homology CDS 12204 13508 . - 0 ID=cds-HBQ7390337.1;Parent=gene-L8R42_002260;Dbxref=NCBI_GP:HBQ7390337.1;Name=HBQ7390337.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=L8R42_002260;product=histidinol dehydrogenase;protein_id=HBQ7390337.1;transl_table=11 DAFVNP010000033.1 tpg gene 13611 14510 . - . ID=gene-L8R42_002261;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=L8R42_002261 DAFVNP010000033.1 Protein Homology CDS 13611 14510 . - 0 ID=cds-HBQ7390338.1;Parent=gene-L8R42_002261;Dbxref=NCBI_GP:HBQ7390338.1;Name=HBQ7390338.1;gbkey=CDS;gene=hisG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=L8R42_002261;product=ATP phosphoribosyltransferase;protein_id=HBQ7390338.1;transl_table=11 DAFVNP010000033.1 cmsearch sequence_feature 14557 14680 . - . ID=id-DAFVNP010000033.1:14557..14680;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 DAFVNP010000033.1 tpg gene 14656 14706 . - . ID=gene-L8R42_002262;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=L8R42_002262 DAFVNP010000033.1 Protein Homology CDS 14656 14706 . - 0 ID=cds-HBQ7390339.1;Parent=gene-L8R42_002262;Dbxref=NCBI_GP:HBQ7390339.1;Name=HBQ7390339.1;gbkey=CDS;gene=hisL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=L8R42_002262;product=his operon leader peptide;protein_id=HBQ7390339.1;transl_table=11 DAFVNP010000033.1 tpg gene 14869 15693 . + . ID=gene-L8R42_002263;Name=L8R42_002263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002263 DAFVNP010000033.1 Protein Homology CDS 14869 15693 . + 0 ID=cds-HBQ7390340.1;Parent=gene-L8R42_002263;Dbxref=NCBI_GP:HBQ7390340.1;Name=HBQ7390340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=L8R42_002263;product=SDR family oxidoreductase;protein_id=HBQ7390340.1;transl_table=11 DAFVNP010000033.1 tpg gene 15739 16653 . + . ID=gene-L8R42_002264;Name=L8R42_002264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002264 DAFVNP010000033.1 Protein Homology CDS 15739 16653 . + 0 ID=cds-HBQ7390341.1;Parent=gene-L8R42_002264;Dbxref=NCBI_GP:HBQ7390341.1;Name=HBQ7390341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=L8R42_002264;product=LysR family transcriptional regulator;protein_id=HBQ7390341.1;transl_table=11 DAFVNP010000033.1 tpg gene 16887 16949 . + . ID=gene-L8R42_002265;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=L8R42_002265 DAFVNP010000033.1 Protein Homology CDS 16887 16949 . + 0 ID=cds-HBQ7390342.1;Parent=gene-L8R42_002265;Dbxref=NCBI_GP:HBQ7390342.1;Name=HBQ7390342.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=L8R42_002265;product=membrane protein YoeI;protein_id=HBQ7390342.1;transl_table=11 DAFVNP010000033.1 tpg gene 16939 18297 . + . ID=gene-L8R42_002266;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=L8R42_002266 DAFVNP010000033.1 Protein Homology CDS 16939 18297 . + 0 ID=cds-HBQ7390343.1;Parent=gene-L8R42_002266;Dbxref=NCBI_GP:HBQ7390343.1;Name=HBQ7390343.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=L8R42_002266;product=putrescine/proton symporter PlaP;protein_id=HBQ7390343.1;transl_table=11 DAFVNP010000033.1 tpg gene 18429 19859 . - . ID=gene-L8R42_002267;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=L8R42_002267 DAFVNP010000033.1 Protein Homology CDS 18429 19859 . - 0 ID=cds-HBQ7390344.1;Parent=gene-L8R42_002267;Dbxref=NCBI_GP:HBQ7390344.1;Name=HBQ7390344.1;gbkey=CDS;gene=sbcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=L8R42_002267;product=exodeoxyribonuclease I;protein_id=HBQ7390344.1;transl_table=11 DAFVNP010000033.1 tpg gene 20202 22550 . - . ID=gene-L8R42_002268;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=L8R42_002268 DAFVNP010000033.1 Protein Homology CDS 20202 22550 . - 0 ID=cds-HBQ7390345.1;Parent=gene-L8R42_002268;Dbxref=NCBI_GP:HBQ7390345.1;Name=HBQ7390345.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=L8R42_002268;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=HBQ7390345.1;transl_table=11 DAFVNP010000033.1 tpg pseudogene 22817 22909 . + . ID=gene-L8R42_002269;Name=L8R42_002269;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002269;pseudo=true DAFVNP010000033.1 Protein Homology CDS 22817 22909 . + 0 ID=cds-L8R42_002269;Parent=gene-L8R42_002269;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=L8R42_002269;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000033.1 tpg gene 23169 25445 . + . ID=gene-L8R42_002270;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=L8R42_002270 DAFVNP010000033.1 Protein Homology CDS 23169 25445 . + 0 ID=cds-HBQ7390346.1;Parent=gene-L8R42_002270;Dbxref=NCBI_GP:HBQ7390346.1;Name=HBQ7390346.1;gbkey=CDS;gene=phsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=L8R42_002270;product=thiosulfate reductase PhsA;protein_id=HBQ7390346.1;transl_table=11 DAFVNP010000033.1 tpg gene 25460 26038 . + . ID=gene-L8R42_002271;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=L8R42_002271 DAFVNP010000033.1 Protein Homology CDS 25460 26038 . + 0 ID=cds-HBQ7390347.1;Parent=gene-L8R42_002271;Dbxref=NCBI_GP:HBQ7390347.1;Name=HBQ7390347.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=L8R42_002271;product=thiosulfate reductase electron transport protein PhsB;protein_id=HBQ7390347.1;transl_table=11 DAFVNP010000033.1 tpg gene 26035 26799 . + . ID=gene-L8R42_002272;Name=L8R42_002272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002272 DAFVNP010000033.1 Protein Homology CDS 26035 26799 . + 0 ID=cds-HBQ7390348.1;Parent=gene-L8R42_002272;Dbxref=NCBI_GP:HBQ7390348.1;Name=HBQ7390348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=L8R42_002272;product=thiosulfate reductase cytochrome B subunit;protein_id=HBQ7390348.1;transl_table=11 DAFVNP010000033.1 tpg gene 26923 28095 . + . ID=gene-L8R42_002273;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=L8R42_002273 DAFVNP010000033.1 Protein Homology CDS 26923 28095 . + 0 ID=cds-HBQ7390349.1;Parent=gene-L8R42_002273;Dbxref=NCBI_GP:HBQ7390349.1;Name=HBQ7390349.1;gbkey=CDS;gene=dacD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=L8R42_002273;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=HBQ7390349.1;transl_table=11 DAFVNP010000033.1 tpg gene 28246 28713 . + . ID=gene-L8R42_002274;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=L8R42_002274 DAFVNP010000033.1 Protein Homology CDS 28246 28713 . + 0 ID=cds-HBQ7390350.1;Parent=gene-L8R42_002274;Dbxref=NCBI_GP:HBQ7390350.1;Name=HBQ7390350.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=L8R42_002274;product=DNA gyrase inhibitor SbmC;protein_id=HBQ7390350.1;transl_table=11 DAFVNP010000033.1 tpg gene 28832 29890 . + . ID=gene-L8R42_002275;Name=L8R42_002275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002275 DAFVNP010000033.1 Protein Homology CDS 28832 29890 . + 0 ID=cds-HBQ7390351.1;Parent=gene-L8R42_002275;Dbxref=NCBI_GP:HBQ7390351.1;Name=HBQ7390351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=L8R42_002275;product=FUSC family protein;protein_id=HBQ7390351.1;transl_table=11 DAFVNP010000033.1 tpg gene 30135 30470 . + . ID=gene-L8R42_002276;Name=L8R42_002276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002276 DAFVNP010000033.1 Protein Homology CDS 30135 30470 . + 0 ID=cds-HBQ7390352.1;Parent=gene-L8R42_002276;Dbxref=NCBI_GP:HBQ7390352.1;Name=HBQ7390352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=L8R42_002276;product=DUF496 family protein;protein_id=HBQ7390352.1;transl_table=11 DAFVNP010000033.1 tpg gene 30504 31370 . - . ID=gene-L8R42_002277;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=L8R42_002277 DAFVNP010000033.1 Protein Homology CDS 30504 31370 . - 0 ID=cds-HBQ7390353.1;Parent=gene-L8R42_002277;Dbxref=NCBI_GP:HBQ7390353.1;Name=HBQ7390353.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=L8R42_002277;product=L-threonine kinase PduX;protein_id=HBQ7390353.1;transl_table=11 DAFVNP010000033.1 tpg gene 31464 32678 . - . ID=gene-L8R42_002278;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=L8R42_002278 DAFVNP010000033.1 Protein Homology CDS 31464 32678 . - 0 ID=cds-HBQ7390354.1;Parent=gene-L8R42_002278;Dbxref=NCBI_GP:HBQ7390354.1;Name=HBQ7390354.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=L8R42_002278;product=propanediol utilization propionate kinase PduW;protein_id=HBQ7390354.1;transl_table=11 DAFVNP010000033.1 tpg gene 32663 33115 . - . ID=gene-L8R42_002279;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=L8R42_002279 DAFVNP010000033.1 Protein Homology CDS 32663 33115 . - 0 ID=cds-HBQ7390355.1;Parent=gene-L8R42_002279;Dbxref=NCBI_GP:HBQ7390355.1;Name=HBQ7390355.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=L8R42_002279;product=propanediol utilization protein PduV;protein_id=HBQ7390355.1;transl_table=11 DAFVNP010000033.1 tpg gene 33120 33470 . - . ID=gene-L8R42_002280;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=L8R42_002280 DAFVNP010000033.1 Protein Homology CDS 33120 33470 . - 0 ID=cds-HBQ7390356.1;Parent=gene-L8R42_002280;Dbxref=NCBI_GP:HBQ7390356.1;Name=HBQ7390356.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=L8R42_002280;product=propanediol utilization microcompartment protein PduU;protein_id=HBQ7390356.1;transl_table=11 DAFVNP010000033.1 tpg gene 33470 34024 . - . ID=gene-L8R42_002281;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=L8R42_002281 DAFVNP010000033.1 Protein Homology CDS 33470 34024 . - 0 ID=cds-HBQ7390357.1;Parent=gene-L8R42_002281;Dbxref=NCBI_GP:HBQ7390357.1;Name=HBQ7390357.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=L8R42_002281;product=propanediol utilization microcompartment protein PduT;protein_id=HBQ7390357.1;transl_table=11 DAFVNP010000033.1 tpg gene 34027 35382 . - . ID=gene-L8R42_002282;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=L8R42_002282 DAFVNP010000033.1 Protein Homology CDS 34027 35382 . - 0 ID=cds-HBQ7390358.1;Parent=gene-L8R42_002282;Dbxref=NCBI_GP:HBQ7390358.1;Name=HBQ7390358.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=L8R42_002282;product=cobalamin reductase PduS;protein_id=HBQ7390358.1;transl_table=11 DAFVNP010000033.1 tpg gene 35379 36491 . - . ID=gene-L8R42_002283;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=L8R42_002283 DAFVNP010000033.1 Protein Homology CDS 35379 36491 . - 0 ID=cds-HBQ7390359.1;Parent=gene-L8R42_002283;Dbxref=NCBI_GP:HBQ7390359.1;Name=HBQ7390359.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=L8R42_002283;product=1-propanol dehydrogenase PduQ;protein_id=HBQ7390359.1;transl_table=11 DAFVNP010000033.1 tpg gene 36503 37897 . - . ID=gene-L8R42_002284;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=L8R42_002284 DAFVNP010000033.1 Protein Homology CDS 36503 37897 . - 0 ID=cds-HBQ7390360.1;Parent=gene-L8R42_002284;Dbxref=NCBI_GP:HBQ7390360.1;Name=HBQ7390360.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=L8R42_002284;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=HBQ7390360.1;transl_table=11 DAFVNP010000033.1 tpg gene 37894 38904 . - . ID=gene-L8R42_002285;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=L8R42_002285 DAFVNP010000033.1 Protein Homology CDS 37894 38904 . - 0 ID=cds-HBQ7390361.1;Parent=gene-L8R42_002285;Dbxref=NCBI_GP:HBQ7390361.1;Name=HBQ7390361.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=L8R42_002285;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=HBQ7390361.1;transl_table=11 DAFVNP010000033.1 tpg gene 38914 39189 . - . ID=gene-L8R42_002286;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=L8R42_002286 DAFVNP010000033.1 Protein Homology CDS 38914 39189 . - 0 ID=cds-HBQ7390362.1;Parent=gene-L8R42_002286;Dbxref=NCBI_GP:HBQ7390362.1;Name=HBQ7390362.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=L8R42_002286;product=propanediol utilization microcompartment protein PduN;protein_id=HBQ7390362.1;transl_table=11 DAFVNP010000033.1 tpg gene 39193 39684 . - . ID=gene-L8R42_002287;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=L8R42_002287 DAFVNP010000033.1 Protein Homology CDS 39193 39684 . - 0 ID=cds-HBQ7390363.1;Parent=gene-L8R42_002287;Dbxref=NCBI_GP:HBQ7390363.1;Name=HBQ7390363.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=L8R42_002287;product=propanediol utilization microcompartment protein PduM;protein_id=HBQ7390363.1;transl_table=11 DAFVNP010000033.1 tpg gene 39681 40313 . - . ID=gene-L8R42_002288;Name=L8R42_002288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002288 DAFVNP010000033.1 Protein Homology CDS 39681 40313 . - 0 ID=cds-HBQ7390364.1;Parent=gene-L8R42_002288;Dbxref=NCBI_GP:HBQ7390364.1;Name=HBQ7390364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=L8R42_002288;product=phosphate propanoyltransferase;protein_id=HBQ7390364.1;transl_table=11 DAFVNP010000033.1 tpg gene 40313 40795 . - . ID=gene-L8R42_002289;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=L8R42_002289 DAFVNP010000033.1 Protein Homology CDS 40313 40795 . - 0 ID=cds-HBQ7390365.1;Parent=gene-L8R42_002289;Dbxref=NCBI_GP:HBQ7390365.1;Name=HBQ7390365.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=L8R42_002289;product=propanediol utilization microcompartment protein PduK;protein_id=HBQ7390365.1;transl_table=11 DAFVNP010000033.1 tpg gene 40799 41074 . - . ID=gene-L8R42_002290;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=L8R42_002290 DAFVNP010000033.1 Protein Homology CDS 40799 41074 . - 0 ID=cds-HBQ7390366.1;Parent=gene-L8R42_002290;Dbxref=NCBI_GP:HBQ7390366.1;Name=HBQ7390366.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=L8R42_002290;product=propanediol utilization microcompartment protein PduJ;protein_id=HBQ7390366.1;transl_table=11 DAFVNP010000033.1 tpg gene 41093 41443 . - . ID=gene-L8R42_002291;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=L8R42_002291 DAFVNP010000033.1 Protein Homology CDS 41093 41443 . - 0 ID=cds-HBQ7390367.1;Parent=gene-L8R42_002291;Dbxref=NCBI_GP:HBQ7390367.1;Name=HBQ7390367.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=L8R42_002291;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=HBQ7390367.1;transl_table=11 DAFVNP010000033.1 tpg gene 41433 43265 . - . ID=gene-L8R42_002292;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=L8R42_002292 DAFVNP010000033.1 Protein Homology CDS 41433 43265 . - 0 ID=cds-HBQ7390368.1;Parent=gene-L8R42_002292;Dbxref=NCBI_GP:HBQ7390368.1;Name=HBQ7390368.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=L8R42_002292;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=HBQ7390368.1;transl_table=11 DAFVNP010000033.1 tpg gene 43281 43802 . - . ID=gene-L8R42_002293;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=L8R42_002293 DAFVNP010000033.1 Protein Homology CDS 43281 43802 . - 0 ID=cds-HBQ7390369.1;Parent=gene-L8R42_002293;Dbxref=NCBI_GP:HBQ7390369.1;Name=HBQ7390369.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=L8R42_002293;product=propanediol dehydratase small subunit PduE;protein_id=HBQ7390369.1;transl_table=11 DAFVNP010000033.1 tpg gene 43817 44491 . - . ID=gene-L8R42_002294;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=L8R42_002294 DAFVNP010000033.1 Protein Homology CDS 43817 44491 . - 0 ID=cds-HBQ7390370.1;Parent=gene-L8R42_002294;Dbxref=NCBI_GP:HBQ7390370.1;Name=HBQ7390370.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=L8R42_002294;product=propanediol dehydratase medium subunit PduD;protein_id=HBQ7390370.1;transl_table=11 DAFVNP010000033.1 tpg gene 44502 46166 . - . ID=gene-L8R42_002295;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=L8R42_002295 DAFVNP010000033.1 Protein Homology CDS 44502 46166 . - 0 ID=cds-HBQ7390371.1;Parent=gene-L8R42_002295;Dbxref=NCBI_GP:HBQ7390371.1;Name=HBQ7390371.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=L8R42_002295;product=propanediol dehydratase large subunit PduC;protein_id=HBQ7390371.1;transl_table=11 DAFVNP010000033.1 tpg gene 46185 46997 . - . ID=gene-L8R42_002296;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=L8R42_002296 DAFVNP010000033.1 Protein Homology CDS 46185 46997 . - 0 ID=cds-HBQ7390372.1;Parent=gene-L8R42_002296;Dbxref=NCBI_GP:HBQ7390372.1;Name=HBQ7390372.1;gbkey=CDS;gene=pduB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=L8R42_002296;product=propanediol utilization microcompartment protein PduB;protein_id=HBQ7390372.1;transl_table=11 DAFVNP010000033.1 tpg gene 46994 47278 . - . ID=gene-L8R42_002297;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=L8R42_002297 DAFVNP010000033.1 Protein Homology CDS 46994 47278 . - 0 ID=cds-HBQ7390373.1;Parent=gene-L8R42_002297;Dbxref=NCBI_GP:HBQ7390373.1;Name=HBQ7390373.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=L8R42_002297;product=propanediol utilization microcompartment protein PduA;protein_id=HBQ7390373.1;transl_table=11 ##sequence-region DAFVNP010000034.1 1 47274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000034.1 tpg region 1 47274 . + . ID=DAFVNP010000034.1:1..47274;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000034.1 tpg gene 1 335 . + . ID=gene-L8R42_002298;Name=L8R42_002298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002298;partial=true;start_range=.,1 DAFVNP010000034.1 GeneMarkS-2+ CDS 1 335 . + 2 ID=cds-HBQ7390374.1;Parent=gene-L8R42_002298;Dbxref=NCBI_GP:HBQ7390374.1;Name=HBQ7390374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_002298;partial=true;product=hypothetical protein;protein_id=HBQ7390374.1;start_range=.,1;transl_table=11 DAFVNP010000034.1 tpg gene 645 1832 . + . ID=gene-L8R42_002299;Name=L8R42_002299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002299 DAFVNP010000034.1 Protein Homology CDS 645 1832 . + 0 ID=cds-HBQ7390375.1;Parent=gene-L8R42_002299;Dbxref=NCBI_GP:HBQ7390375.1;Name=HBQ7390375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=L8R42_002299;product=MFS transporter;protein_id=HBQ7390375.1;transl_table=11 DAFVNP010000034.1 tpg gene 1801 2760 . + . ID=gene-L8R42_002300;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=L8R42_002300 DAFVNP010000034.1 Protein Homology CDS 1801 2760 . + 0 ID=cds-HBQ7390376.1;Parent=gene-L8R42_002300;Dbxref=NCBI_GP:HBQ7390376.1;Name=HBQ7390376.1;gbkey=CDS;gene=yidZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=L8R42_002300;product=HTH-type transcriptional regulator YidZ;protein_id=HBQ7390376.1;transl_table=11 DAFVNP010000034.1 tpg gene 2918 3673 . + . ID=gene-L8R42_002301;Name=L8R42_002301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002301 DAFVNP010000034.1 Protein Homology CDS 2918 3673 . + 0 ID=cds-HBQ7390377.1;Parent=gene-L8R42_002301;Dbxref=NCBI_GP:HBQ7390377.1;Name=HBQ7390377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=L8R42_002301;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=HBQ7390377.1;transl_table=11 DAFVNP010000034.1 tpg gene 3673 4257 . + . ID=gene-L8R42_002302;Name=L8R42_002302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002302 DAFVNP010000034.1 Protein Homology CDS 3673 4257 . + 0 ID=cds-HBQ7390378.1;Parent=gene-L8R42_002302;Dbxref=NCBI_GP:HBQ7390378.1;Name=HBQ7390378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=L8R42_002302;product=NAD(P)H-dependent oxidoreductase;protein_id=HBQ7390378.1;transl_table=11 DAFVNP010000034.1 tpg gene 4302 5639 . - . ID=gene-L8R42_002303;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=L8R42_002303 DAFVNP010000034.1 Protein Homology CDS 4302 5639 . - 0 ID=cds-HBQ7390379.1;Parent=gene-L8R42_002303;Dbxref=NCBI_GP:HBQ7390379.1;Name=HBQ7390379.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=L8R42_002303;product=adenine permease AdeP;protein_id=HBQ7390379.1;transl_table=11 DAFVNP010000034.1 tpg gene 5845 6654 . + . ID=gene-L8R42_002304;Name=L8R42_002304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002304 DAFVNP010000034.1 Protein Homology CDS 5845 6654 . + 0 ID=cds-HBQ7390380.1;Parent=gene-L8R42_002304;Dbxref=NCBI_GP:HBQ7390380.1;Name=HBQ7390380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728293.1;locus_tag=L8R42_002304;product=WG repeat-containing protein;protein_id=HBQ7390380.1;transl_table=11 DAFVNP010000034.1 tpg gene 6667 7332 . + . ID=gene-L8R42_002305;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=L8R42_002305 DAFVNP010000034.1 Protein Homology CDS 6667 7332 . + 0 ID=cds-HBQ7390381.1;Parent=gene-L8R42_002305;Dbxref=NCBI_GP:HBQ7390381.1;Name=HBQ7390381.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=L8R42_002305;product=6-phosphogluconate phosphatase;protein_id=HBQ7390381.1;transl_table=11 DAFVNP010000034.1 tpg gene 7427 8152 . - . ID=gene-L8R42_002306;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=L8R42_002306 DAFVNP010000034.1 Protein Homology CDS 7427 8152 . - 0 ID=cds-HBQ7390382.1;Parent=gene-L8R42_002306;Dbxref=NCBI_GP:HBQ7390382.1;Name=HBQ7390382.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=L8R42_002306;product=phosphate signaling complex protein PhoU;protein_id=HBQ7390382.1;transl_table=11 DAFVNP010000034.1 tpg gene 8167 8940 . - . ID=gene-L8R42_002307;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=L8R42_002307 DAFVNP010000034.1 Protein Homology CDS 8167 8940 . - 0 ID=cds-HBQ7390383.1;Parent=gene-L8R42_002307;Dbxref=NCBI_GP:HBQ7390383.1;Name=HBQ7390383.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=L8R42_002307;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=HBQ7390383.1;transl_table=11 DAFVNP010000034.1 tpg gene 9027 9917 . - . ID=gene-L8R42_002308;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=L8R42_002308 DAFVNP010000034.1 Protein Homology CDS 9027 9917 . - 0 ID=cds-HBQ7390384.1;Parent=gene-L8R42_002308;Dbxref=NCBI_GP:HBQ7390384.1;Name=HBQ7390384.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=L8R42_002308;product=phosphate ABC transporter permease PstA;protein_id=HBQ7390384.1;transl_table=11 DAFVNP010000034.1 tpg gene 9917 10876 . - . ID=gene-L8R42_002309;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=L8R42_002309 DAFVNP010000034.1 Protein Homology CDS 9917 10876 . - 0 ID=cds-HBQ7390385.1;Parent=gene-L8R42_002309;Dbxref=NCBI_GP:HBQ7390385.1;Name=HBQ7390385.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=L8R42_002309;product=phosphate ABC transporter permease PstC;protein_id=HBQ7390385.1;transl_table=11 DAFVNP010000034.1 tpg gene 11012 12052 . - . ID=gene-L8R42_002310;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=L8R42_002310 DAFVNP010000034.1 Protein Homology CDS 11012 12052 . - 0 ID=cds-HBQ7390386.1;Parent=gene-L8R42_002310;Dbxref=NCBI_GP:HBQ7390386.1;Name=HBQ7390386.1;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=L8R42_002310;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=HBQ7390386.1;transl_table=11 DAFVNP010000034.1 tpg gene 12218 13591 . - . ID=gene-L8R42_002311;Name=L8R42_002311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002311 DAFVNP010000034.1 Protein Homology CDS 12218 13591 . - 0 ID=cds-HBQ7390387.1;Parent=gene-L8R42_002311;Dbxref=NCBI_GP:HBQ7390387.1;Name=HBQ7390387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=L8R42_002311;product=PTS transporter subunit EIIC;protein_id=HBQ7390387.1;transl_table=11 DAFVNP010000034.1 tpg gene 13640 14458 . - . ID=gene-L8R42_002312;Name=L8R42_002312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002312 DAFVNP010000034.1 Protein Homology CDS 13640 14458 . - 0 ID=cds-HBQ7390388.1;Parent=gene-L8R42_002312;Dbxref=NCBI_GP:HBQ7390388.1;Name=HBQ7390388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=L8R42_002312;product=shikimate 5-dehydrogenase;protein_id=HBQ7390388.1;transl_table=11 DAFVNP010000034.1 tpg gene 14553 16310 . + . ID=gene-L8R42_002313;Name=L8R42_002313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002313 DAFVNP010000034.1 Protein Homology CDS 14553 16310 . + 0 ID=cds-HBQ7390389.1;Parent=gene-L8R42_002313;Dbxref=NCBI_GP:HBQ7390389.1;Name=HBQ7390389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=L8R42_002313;product=SgrR family transcriptional regulator;protein_id=HBQ7390389.1;transl_table=11 DAFVNP010000034.1 tpg gene 16460 18289 . - . ID=gene-L8R42_002314;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=L8R42_002314 DAFVNP010000034.1 Protein Homology CDS 16460 18289 . - 0 ID=cds-HBQ7390390.1;Parent=gene-L8R42_002314;Dbxref=NCBI_GP:HBQ7390390.1;Name=HBQ7390390.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=L8R42_002314;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=HBQ7390390.1;transl_table=11 DAFVNP010000034.1 tpg gene 18478 19848 . - . ID=gene-L8R42_002315;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=L8R42_002315 DAFVNP010000034.1 Protein Homology CDS 18478 19848 . - 0 ID=cds-HBQ7390391.1;Parent=gene-L8R42_002315;Dbxref=NCBI_GP:HBQ7390391.1;Name=HBQ7390391.1;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=L8R42_002315;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=HBQ7390391.1;transl_table=11 DAFVNP010000034.1 tpg gene 20168 20866 . - . ID=gene-L8R42_002316;Name=L8R42_002316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002316 DAFVNP010000034.1 Protein Homology CDS 20168 20866 . - 0 ID=cds-HBQ7390392.1;Parent=gene-L8R42_002316;Dbxref=NCBI_GP:HBQ7390392.1;Name=HBQ7390392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=L8R42_002316;product=Bax inhibitor-1/YccA family protein;protein_id=HBQ7390392.1;transl_table=11 DAFVNP010000034.1 tpg gene 21096 21515 . - . ID=gene-L8R42_002317;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=L8R42_002317 DAFVNP010000034.1 Protein Homology CDS 21096 21515 . - 0 ID=cds-HBQ7390393.1;Parent=gene-L8R42_002317;Dbxref=NCBI_GP:HBQ7390393.1;Name=HBQ7390393.1;gbkey=CDS;gene=atpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=L8R42_002317;product=F0F1 ATP synthase subunit epsilon;protein_id=HBQ7390393.1;transl_table=11 DAFVNP010000034.1 tpg gene 21536 22918 . - . ID=gene-L8R42_002318;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=L8R42_002318 DAFVNP010000034.1 Protein Homology CDS 21536 22918 . - 0 ID=cds-HBQ7390394.1;Parent=gene-L8R42_002318;Dbxref=NCBI_GP:HBQ7390394.1;Name=HBQ7390394.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=L8R42_002318;product=F0F1 ATP synthase subunit beta;protein_id=HBQ7390394.1;transl_table=11 DAFVNP010000034.1 tpg gene 22945 23808 . - . ID=gene-L8R42_002319;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=L8R42_002319 DAFVNP010000034.1 Protein Homology CDS 22945 23808 . - 0 ID=cds-HBQ7390395.1;Parent=gene-L8R42_002319;Dbxref=NCBI_GP:HBQ7390395.1;Name=HBQ7390395.1;gbkey=CDS;gene=atpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=L8R42_002319;product=F0F1 ATP synthase subunit gamma;protein_id=HBQ7390395.1;transl_table=11 DAFVNP010000034.1 tpg gene 23859 25400 . - . ID=gene-L8R42_002320;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=L8R42_002320 DAFVNP010000034.1 Protein Homology CDS 23859 25400 . - 0 ID=cds-HBQ7390396.1;Parent=gene-L8R42_002320;Dbxref=NCBI_GP:HBQ7390396.1;Name=HBQ7390396.1;gbkey=CDS;gene=atpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=L8R42_002320;product=F0F1 ATP synthase subunit alpha;protein_id=HBQ7390396.1;transl_table=11 DAFVNP010000034.1 tpg gene 25413 25946 . - . ID=gene-L8R42_002321;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=L8R42_002321 DAFVNP010000034.1 Protein Homology CDS 25413 25946 . - 0 ID=cds-HBQ7390397.1;Parent=gene-L8R42_002321;Dbxref=NCBI_GP:HBQ7390397.1;Name=HBQ7390397.1;gbkey=CDS;gene=atpH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=L8R42_002321;product=F0F1 ATP synthase subunit delta;protein_id=HBQ7390397.1;transl_table=11 DAFVNP010000034.1 tpg gene 25961 26431 . - . ID=gene-L8R42_002322;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=L8R42_002322 DAFVNP010000034.1 Protein Homology CDS 25961 26431 . - 0 ID=cds-HBQ7390398.1;Parent=gene-L8R42_002322;Dbxref=NCBI_GP:HBQ7390398.1;Name=HBQ7390398.1;gbkey=CDS;gene=atpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=L8R42_002322;product=F0F1 ATP synthase subunit B;protein_id=HBQ7390398.1;transl_table=11 DAFVNP010000034.1 tpg gene 26491 26730 . - . ID=gene-L8R42_002323;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=L8R42_002323 DAFVNP010000034.1 Protein Homology CDS 26491 26730 . - 0 ID=cds-HBQ7390399.1;Parent=gene-L8R42_002323;Dbxref=NCBI_GP:HBQ7390399.1;Name=HBQ7390399.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=L8R42_002323;product=F0F1 ATP synthase subunit C;protein_id=HBQ7390399.1;transl_table=11 DAFVNP010000034.1 tpg gene 26777 27592 . - . ID=gene-L8R42_002324;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=L8R42_002324 DAFVNP010000034.1 Protein Homology CDS 26777 27592 . - 0 ID=cds-HBQ7390400.1;Parent=gene-L8R42_002324;Dbxref=NCBI_GP:HBQ7390400.1;Name=HBQ7390400.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=L8R42_002324;product=F0F1 ATP synthase subunit A;protein_id=HBQ7390400.1;transl_table=11 DAFVNP010000034.1 tpg gene 27601 27981 . - . ID=gene-L8R42_002325;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=L8R42_002325 DAFVNP010000034.1 Protein Homology CDS 27601 27981 . - 0 ID=cds-HBQ7390401.1;Parent=gene-L8R42_002325;Dbxref=NCBI_GP:HBQ7390401.1;Name=HBQ7390401.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=L8R42_002325;product=F0F1 ATP synthase subunit I;protein_id=HBQ7390401.1;transl_table=11 DAFVNP010000034.1 tpg gene 28597 29220 . - . ID=gene-L8R42_002326;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=L8R42_002326 DAFVNP010000034.1 Protein Homology CDS 28597 29220 . - 0 ID=cds-HBQ7390402.1;Parent=gene-L8R42_002326;Dbxref=NCBI_GP:HBQ7390402.1;Name=HBQ7390402.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=L8R42_002326;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=HBQ7390402.1;transl_table=11 DAFVNP010000034.1 tpg gene 29323 31212 . - . ID=gene-L8R42_002327;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=L8R42_002327 DAFVNP010000034.1 Protein Homology CDS 29323 31212 . - 0 ID=cds-HBQ7390403.1;Parent=gene-L8R42_002327;Dbxref=NCBI_GP:HBQ7390403.1;Name=HBQ7390403.1;gbkey=CDS;gene=mnmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=L8R42_002327;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=HBQ7390403.1;transl_table=11 DAFVNP010000034.1 tpg gene 31591 32034 . - . ID=gene-L8R42_002328;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=L8R42_002328 DAFVNP010000034.1 Protein Homology CDS 31591 32034 . - 0 ID=cds-HBQ7390404.1;Parent=gene-L8R42_002328;Dbxref=NCBI_GP:HBQ7390404.1;Name=HBQ7390404.1;gbkey=CDS;gene=mioC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=L8R42_002328;product=FMN-binding protein MioC;protein_id=HBQ7390404.1;transl_table=11 DAFVNP010000034.1 tpg gene 32124 32582 . - . ID=gene-L8R42_002329;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=L8R42_002329 DAFVNP010000034.1 Protein Homology CDS 32124 32582 . - 0 ID=cds-HBQ7390405.1;Parent=gene-L8R42_002329;Dbxref=NCBI_GP:HBQ7390405.1;Name=HBQ7390405.1;gbkey=CDS;gene=asnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=L8R42_002329;product=transcriptional regulator AsnC;protein_id=HBQ7390405.1;transl_table=11 DAFVNP010000034.1 tpg gene 32733 33725 . + . ID=gene-L8R42_002330;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=L8R42_002330 DAFVNP010000034.1 Protein Homology CDS 32733 33725 . + 0 ID=cds-HBQ7390406.1;Parent=gene-L8R42_002330;Dbxref=NCBI_GP:HBQ7390406.1;Name=HBQ7390406.1;gbkey=CDS;gene=asnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=L8R42_002330;product=aspartate--ammonia ligase;protein_id=HBQ7390406.1;transl_table=11 DAFVNP010000034.1 tpg gene 33730 35181 . - . ID=gene-L8R42_002331;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=L8R42_002331 DAFVNP010000034.1 Protein Homology CDS 33730 35181 . - 0 ID=cds-HBQ7390407.1;Parent=gene-L8R42_002331;Dbxref=NCBI_GP:HBQ7390407.1;Name=HBQ7390407.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=L8R42_002331;product=ATPase RavA stimulator ViaA;protein_id=HBQ7390407.1;transl_table=11 DAFVNP010000034.1 tpg gene 35175 36671 . - . ID=gene-L8R42_002332;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=L8R42_002332 DAFVNP010000034.1 Protein Homology CDS 35175 36671 . - 0 ID=cds-HBQ7390408.1;Parent=gene-L8R42_002332;Dbxref=NCBI_GP:HBQ7390408.1;Name=HBQ7390408.1;gbkey=CDS;gene=ravA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=L8R42_002332;product=ATPase RavA;protein_id=HBQ7390408.1;transl_table=11 DAFVNP010000034.1 tpg gene 37020 38888 . + . ID=gene-L8R42_002333;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=L8R42_002333 DAFVNP010000034.1 Protein Homology CDS 37020 38888 . + 0 ID=cds-HBQ7390409.1;Parent=gene-L8R42_002333;Dbxref=NCBI_GP:HBQ7390409.1;Name=HBQ7390409.1;gbkey=CDS;gene=kup;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=L8R42_002333;product=low affinity potassium transporter Kup;protein_id=HBQ7390409.1;transl_table=11 DAFVNP010000034.1 tpg gene 39085 39504 . + . ID=gene-L8R42_002334;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=L8R42_002334 DAFVNP010000034.1 Protein Homology CDS 39085 39504 . + 0 ID=cds-HBQ7390410.1;Parent=gene-L8R42_002334;Dbxref=NCBI_GP:HBQ7390410.1;Name=HBQ7390410.1;gbkey=CDS;gene=rbsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=L8R42_002334;product=D-ribose pyranase;protein_id=HBQ7390410.1;transl_table=11 DAFVNP010000034.1 tpg gene 39512 41017 . + . ID=gene-L8R42_002335;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=L8R42_002335 DAFVNP010000034.1 Protein Homology CDS 39512 41017 . + 0 ID=cds-HBQ7390411.1;Parent=gene-L8R42_002335;Dbxref=NCBI_GP:HBQ7390411.1;Name=HBQ7390411.1;gbkey=CDS;gene=rbsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=L8R42_002335;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=HBQ7390411.1;transl_table=11 DAFVNP010000034.1 tpg gene 41023 41988 . + . ID=gene-L8R42_002336;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=L8R42_002336 DAFVNP010000034.1 Protein Homology CDS 41023 41988 . + 0 ID=cds-HBQ7390412.1;Parent=gene-L8R42_002336;Dbxref=NCBI_GP:HBQ7390412.1;Name=HBQ7390412.1;gbkey=CDS;gene=rbsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=L8R42_002336;product=ribose ABC transporter permease;protein_id=HBQ7390412.1;transl_table=11 DAFVNP010000034.1 tpg gene 42013 42903 . + . ID=gene-L8R42_002337;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=L8R42_002337 DAFVNP010000034.1 Protein Homology CDS 42013 42903 . + 0 ID=cds-HBQ7390413.1;Parent=gene-L8R42_002337;Dbxref=NCBI_GP:HBQ7390413.1;Name=HBQ7390413.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=L8R42_002337;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=HBQ7390413.1;transl_table=11 DAFVNP010000034.1 tpg gene 43036 43965 . + . ID=gene-L8R42_002338;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=L8R42_002338 DAFVNP010000034.1 Protein Homology CDS 43036 43965 . + 0 ID=cds-HBQ7390414.1;Parent=gene-L8R42_002338;Dbxref=NCBI_GP:HBQ7390414.1;Name=HBQ7390414.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=L8R42_002338;product=ribokinase;protein_id=HBQ7390414.1;transl_table=11 DAFVNP010000034.1 tpg gene 43969 44967 . + . ID=gene-L8R42_002339;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=L8R42_002339 DAFVNP010000034.1 Protein Homology CDS 43969 44967 . + 0 ID=cds-HBQ7390415.1;Parent=gene-L8R42_002339;Dbxref=NCBI_GP:HBQ7390415.1;Name=HBQ7390415.1;gbkey=CDS;gene=rbsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=L8R42_002339;product=ribose operon transcriptional repressor RbsR;protein_id=HBQ7390415.1;transl_table=11 DAFVNP010000034.1 tpg gene 44933 46360 . - . ID=gene-L8R42_002340;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=L8R42_002340 DAFVNP010000034.1 Protein Homology CDS 44933 46360 . - 0 ID=cds-HBQ7390416.1;Parent=gene-L8R42_002340;Dbxref=NCBI_GP:HBQ7390416.1;Name=HBQ7390416.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=L8R42_002340;product=multidrug transporter subunit MdtD;protein_id=HBQ7390416.1;transl_table=11 DAFVNP010000034.1 tpg gene 46372 47076 . - . ID=gene-L8R42_002341;Name=L8R42_002341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002341 DAFVNP010000034.1 Protein Homology CDS 46372 47076 . - 0 ID=cds-HBQ7390417.1;Parent=gene-L8R42_002341;Dbxref=NCBI_GP:HBQ7390417.1;Name=HBQ7390417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=L8R42_002341;product=FadR family transcriptional regulator;protein_id=HBQ7390417.1;transl_table=11 ##sequence-region DAFVNP010000035.1 1 47053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000035.1 tpg region 1 47053 . + . ID=DAFVNP010000035.1:1..47053;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000035.1 tpg gene 372 1778 . + . ID=gene-L8R42_002342;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=L8R42_002342 DAFVNP010000035.1 Protein Homology CDS 372 1778 . + 0 ID=cds-HBQ7390418.1;Parent=gene-L8R42_002342;Dbxref=NCBI_GP:HBQ7390418.1;Name=HBQ7390418.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=L8R42_002342;product=chitoporin;protein_id=HBQ7390418.1;transl_table=11 DAFVNP010000035.1 tpg gene 1828 2160 . + . ID=gene-L8R42_002343;Name=L8R42_002343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002343 DAFVNP010000035.1 Protein Homology CDS 1828 2160 . + 0 ID=cds-HBQ7390419.1;Parent=gene-L8R42_002343;Dbxref=NCBI_GP:HBQ7390419.1;Name=HBQ7390419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=L8R42_002343;product=hypothetical protein;protein_id=HBQ7390419.1;transl_table=11 DAFVNP010000035.1 tpg gene 2209 3513 . - . ID=gene-L8R42_002344;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=L8R42_002344 DAFVNP010000035.1 Protein Homology CDS 2209 3513 . - 0 ID=cds-HBQ7390420.1;Parent=gene-L8R42_002344;Dbxref=NCBI_GP:HBQ7390420.1;Name=HBQ7390420.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=L8R42_002344;product=tricarballylate/proton symporter TcuC;protein_id=HBQ7390420.1;transl_table=11 DAFVNP010000035.1 tpg gene 3564 4703 . - . ID=gene-L8R42_002345;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=L8R42_002345 DAFVNP010000035.1 Protein Homology CDS 3564 4703 . - 0 ID=cds-HBQ7390421.1;Parent=gene-L8R42_002345;Dbxref=NCBI_GP:HBQ7390421.1;Name=HBQ7390421.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=L8R42_002345;product=tricarballylate utilization protein TcuB;protein_id=HBQ7390421.1;transl_table=11 DAFVNP010000035.1 tpg gene 4690 6093 . - . ID=gene-L8R42_002346;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=L8R42_002346 DAFVNP010000035.1 Protein Homology CDS 4690 6093 . - 0 ID=cds-HBQ7390422.1;Parent=gene-L8R42_002346;Dbxref=NCBI_GP:HBQ7390422.1;Name=HBQ7390422.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=L8R42_002346;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=HBQ7390422.1;transl_table=11 DAFVNP010000035.1 tpg gene 6191 7117 . - . ID=gene-L8R42_002347;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=L8R42_002347 DAFVNP010000035.1 Protein Homology CDS 6191 7117 . - 0 ID=cds-HBQ7390423.1;Parent=gene-L8R42_002347;Dbxref=NCBI_GP:HBQ7390423.1;Name=HBQ7390423.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=L8R42_002347;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=HBQ7390423.1;transl_table=11 DAFVNP010000035.1 tpg gene 7232 7684 . - . ID=gene-L8R42_002348;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=L8R42_002348 DAFVNP010000035.1 Protein Homology CDS 7232 7684 . - 0 ID=cds-HBQ7390424.1;Parent=gene-L8R42_002348;Dbxref=NCBI_GP:HBQ7390424.1;Name=HBQ7390424.1;gbkey=CDS;gene=fur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=L8R42_002348;product=ferric iron uptake transcriptional regulator;protein_id=HBQ7390424.1;transl_table=11 DAFVNP010000035.1 tpg pseudogene 7677 7762 . - . ID=gene-L8R42_002349;Name=L8R42_002349;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002349;pseudo=true DAFVNP010000035.1 Protein Homology CDS 7677 7762 . - 0 ID=cds-L8R42_002349;Parent=gene-L8R42_002349;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=L8R42_002349;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 DAFVNP010000035.1 tpg gene 7966 8496 . - . ID=gene-L8R42_002350;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=L8R42_002350 DAFVNP010000035.1 Protein Homology CDS 7966 8496 . - 0 ID=cds-HBQ7390425.1;Parent=gene-L8R42_002350;Dbxref=NCBI_GP:HBQ7390425.1;Name=HBQ7390425.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=L8R42_002350;product=flavodoxin FldA;protein_id=HBQ7390425.1;transl_table=11 DAFVNP010000035.1 tpg gene 8647 8940 . - . ID=gene-L8R42_002351;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=L8R42_002351 DAFVNP010000035.1 Protein Homology CDS 8647 8940 . - 0 ID=cds-HBQ7390426.1;Parent=gene-L8R42_002351;Dbxref=NCBI_GP:HBQ7390426.1;Name=HBQ7390426.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=L8R42_002351;product=LexA regulated protein;protein_id=HBQ7390426.1;transl_table=11 DAFVNP010000035.1 tpg gene 9074 9844 . - . ID=gene-L8R42_002352;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=L8R42_002352 DAFVNP010000035.1 Protein Homology CDS 9074 9844 . - 0 ID=cds-HBQ7390427.1;Parent=gene-L8R42_002352;Dbxref=NCBI_GP:HBQ7390427.1;Name=HBQ7390427.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=L8R42_002352;product=esterase;protein_id=HBQ7390427.1;transl_table=11 DAFVNP010000035.1 tpg gene 10029 10571 . + . ID=gene-L8R42_002353;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=L8R42_002353 DAFVNP010000035.1 Protein Homology CDS 10029 10571 . + 0 ID=cds-HBQ7390428.1;Parent=gene-L8R42_002353;Dbxref=NCBI_GP:HBQ7390428.1;Name=HBQ7390428.1;gbkey=CDS;gene=seqA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=L8R42_002353;product=replication initiation negative regulator SeqA;protein_id=HBQ7390428.1;transl_table=11 DAFVNP010000035.1 tpg gene 10596 12236 . + . ID=gene-L8R42_002354;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=L8R42_002354 DAFVNP010000035.1 Protein Homology CDS 10596 12236 . + 0 ID=cds-HBQ7390429.1;Parent=gene-L8R42_002354;Dbxref=NCBI_GP:HBQ7390429.1;Name=HBQ7390429.1;gbkey=CDS;gene=pgm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=L8R42_002354;product=alpha-D-glucose phosphate-specific phosphoglucomutase;protein_id=HBQ7390429.1;transl_table=11 DAFVNP010000035.1 tpg gene 12351 12836 . - . ID=gene-L8R42_002355;Name=L8R42_002355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002355 DAFVNP010000035.1 Protein Homology CDS 12351 12836 . - 0 ID=cds-HBQ7390430.1;Parent=gene-L8R42_002355;Dbxref=NCBI_GP:HBQ7390430.1;Name=HBQ7390430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=L8R42_002355;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=HBQ7390430.1;transl_table=11 DAFVNP010000035.1 tpg gene 12901 14220 . - . ID=gene-L8R42_002356;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=L8R42_002356 DAFVNP010000035.1 Protein Homology CDS 12901 14220 . - 0 ID=cds-HBQ7390431.1;Parent=gene-L8R42_002356;Dbxref=NCBI_GP:HBQ7390431.1;Name=HBQ7390431.1;gbkey=CDS;gene=potE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=L8R42_002356;product=putrescine-ornithine antiporter;protein_id=HBQ7390431.1;transl_table=11 DAFVNP010000035.1 tpg gene 14217 16415 . - . ID=gene-L8R42_002357;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=L8R42_002357 DAFVNP010000035.1 Protein Homology CDS 14217 16415 . - 0 ID=cds-HBQ7390432.1;Parent=gene-L8R42_002357;Dbxref=NCBI_GP:HBQ7390432.1;Name=HBQ7390432.1;gbkey=CDS;gene=speF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=L8R42_002357;product=ornithine decarboxylase SpeF;protein_id=HBQ7390432.1;transl_table=11 DAFVNP010000035.1 tpg gene 16795 16899 . - . ID=gene-L8R42_002358;Name=L8R42_002358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002358 DAFVNP010000035.1 Protein Homology CDS 16795 16899 . - 0 ID=cds-HBQ7390433.1;Parent=gene-L8R42_002358;Dbxref=NCBI_GP:HBQ7390433.1;Name=HBQ7390433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312672.1;locus_tag=L8R42_002358;product=DUF2618 domain-containing protein;protein_id=HBQ7390433.1;transl_table=11 DAFVNP010000035.1 tpg gene 17177 17854 . - . ID=gene-L8R42_002359;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=L8R42_002359 DAFVNP010000035.1 Protein Homology CDS 17177 17854 . - 0 ID=cds-HBQ7390434.1;Parent=gene-L8R42_002359;Dbxref=NCBI_GP:HBQ7390434.1;Name=HBQ7390434.1;gbkey=CDS;gene=kdpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=L8R42_002359;product=two-component system response regulator KdpE;protein_id=HBQ7390434.1;transl_table=11 DAFVNP010000035.1 tpg gene 17851 20535 . - . ID=gene-L8R42_002360;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=L8R42_002360 DAFVNP010000035.1 Protein Homology CDS 17851 20535 . - 0 ID=cds-HBQ7390435.1;Parent=gene-L8R42_002360;Dbxref=NCBI_GP:HBQ7390435.1;Name=HBQ7390435.1;gbkey=CDS;gene=kdpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=L8R42_002360;product=two-component system sensor histidine kinase KdpD;protein_id=HBQ7390435.1;transl_table=11 DAFVNP010000035.1 tpg gene 20532 21116 . - . ID=gene-L8R42_002361;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=L8R42_002361 DAFVNP010000035.1 Protein Homology CDS 20532 21116 . - 0 ID=cds-HBQ7390436.1;Parent=gene-L8R42_002361;Dbxref=NCBI_GP:HBQ7390436.1;Name=HBQ7390436.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=L8R42_002361;product=potassium-transporting ATPase subunit KdpC;protein_id=HBQ7390436.1;transl_table=11 DAFVNP010000035.1 tpg gene 21125 23173 . - . ID=gene-L8R42_002362;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=L8R42_002362 DAFVNP010000035.1 Protein Homology CDS 21125 23173 . - 0 ID=cds-HBQ7390437.1;Parent=gene-L8R42_002362;Dbxref=NCBI_GP:HBQ7390437.1;Name=HBQ7390437.1;gbkey=CDS;gene=kdpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=L8R42_002362;product=potassium-transporting ATPase subunit KdpB;protein_id=HBQ7390437.1;transl_table=11 DAFVNP010000035.1 tpg gene 23194 24873 . - . ID=gene-L8R42_002363;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=L8R42_002363 DAFVNP010000035.1 Protein Homology CDS 23194 24873 . - 0 ID=cds-HBQ7390438.1;Parent=gene-L8R42_002363;Dbxref=NCBI_GP:HBQ7390438.1;Name=HBQ7390438.1;gbkey=CDS;gene=kdpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=L8R42_002363;product=potassium-transporting ATPase subunit KdpA;protein_id=HBQ7390438.1;transl_table=11 DAFVNP010000035.1 tpg gene 24873 24962 . - . ID=gene-L8R42_002364;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=L8R42_002364 DAFVNP010000035.1 Protein Homology CDS 24873 24962 . - 0 ID=cds-HBQ7390439.1;Parent=gene-L8R42_002364;Dbxref=NCBI_GP:HBQ7390439.1;Name=HBQ7390439.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=L8R42_002364;product=K(+)-transporting ATPase subunit F;protein_id=HBQ7390439.1;transl_table=11 DAFVNP010000035.1 tpg gene 25299 25505 . + . ID=gene-L8R42_002365;Name=L8R42_002365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002365 DAFVNP010000035.1 Protein Homology CDS 25299 25505 . + 0 ID=cds-HBQ7390440.1;Parent=gene-L8R42_002365;Dbxref=NCBI_GP:HBQ7390440.1;Name=HBQ7390440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=L8R42_002365;product=YbfA family protein;protein_id=HBQ7390440.1;transl_table=11 DAFVNP010000035.1 tpg gene 25616 27037 . + . ID=gene-L8R42_002366;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=L8R42_002366 DAFVNP010000035.1 Protein Homology CDS 25616 27037 . + 0 ID=cds-HBQ7390441.1;Parent=gene-L8R42_002366;Dbxref=NCBI_GP:HBQ7390441.1;Name=HBQ7390441.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=L8R42_002366;product=deoxyribodipyrimidine photo-lyase;protein_id=HBQ7390441.1;transl_table=11 DAFVNP010000035.1 tpg gene 27076 28557 . - . ID=gene-L8R42_002367;Name=L8R42_002367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002367 DAFVNP010000035.1 Protein Homology CDS 27076 28557 . - 0 ID=cds-HBQ7390442.1;Parent=gene-L8R42_002367;Dbxref=NCBI_GP:HBQ7390442.1;Name=HBQ7390442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=L8R42_002367;product=MFS transporter;protein_id=HBQ7390442.1;transl_table=11 DAFVNP010000035.1 tpg gene 28886 29629 . + . ID=gene-L8R42_002368;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=L8R42_002368 DAFVNP010000035.1 Protein Homology CDS 28886 29629 . + 0 ID=cds-HBQ7390443.1;Parent=gene-L8R42_002368;Dbxref=NCBI_GP:HBQ7390443.1;Name=HBQ7390443.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=L8R42_002368;product=radiation resistance protein YbgI;protein_id=HBQ7390443.1;transl_table=11 DAFVNP010000035.1 tpg gene 29645 30301 . + . ID=gene-L8R42_002369;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=L8R42_002369 DAFVNP010000035.1 Protein Homology CDS 29645 30301 . + 0 ID=cds-HBQ7390444.1;Parent=gene-L8R42_002369;Dbxref=NCBI_GP:HBQ7390444.1;Name=HBQ7390444.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=L8R42_002369;product=5-oxoprolinase subunit PxpB;protein_id=HBQ7390444.1;transl_table=11 DAFVNP010000035.1 tpg gene 30295 31227 . + . ID=gene-L8R42_002370;Name=L8R42_002370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002370 DAFVNP010000035.1 Protein Homology CDS 30295 31227 . + 0 ID=cds-HBQ7390445.1;Parent=gene-L8R42_002370;Dbxref=NCBI_GP:HBQ7390445.1;Name=HBQ7390445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=L8R42_002370;product=biotin-dependent carboxyltransferase family protein;protein_id=HBQ7390445.1;transl_table=11 DAFVNP010000035.1 tpg gene 31217 31951 . + . ID=gene-L8R42_002371;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=L8R42_002371 DAFVNP010000035.1 Protein Homology CDS 31217 31951 . + 0 ID=cds-HBQ7390446.1;Parent=gene-L8R42_002371;Dbxref=NCBI_GP:HBQ7390446.1;Name=HBQ7390446.1;gbkey=CDS;gene=pxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=L8R42_002371;product=5-oxoprolinase subunit PxpA;protein_id=HBQ7390446.1;transl_table=11 DAFVNP010000035.1 tpg gene 32073 32864 . + . ID=gene-L8R42_002372;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=L8R42_002372 DAFVNP010000035.1 Protein Homology CDS 32073 32864 . + 0 ID=cds-HBQ7390447.1;Parent=gene-L8R42_002372;Dbxref=NCBI_GP:HBQ7390447.1;Name=HBQ7390447.1;gbkey=CDS;gene=nei;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=L8R42_002372;product=endonuclease VIII;protein_id=HBQ7390447.1;transl_table=11 DAFVNP010000035.1 tpg gene 32919 33965 . - . ID=gene-L8R42_002373;Name=L8R42_002373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002373 DAFVNP010000035.1 Protein Homology CDS 32919 33965 . - 0 ID=cds-HBQ7390448.1;Parent=gene-L8R42_002373;Dbxref=NCBI_GP:HBQ7390448.1;Name=HBQ7390448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=L8R42_002373;product=AbrB family transcriptional regulator;protein_id=HBQ7390448.1;transl_table=11 DAFVNP010000035.1 tpg gene 34102 35385 . - . ID=gene-L8R42_002374;Name=L8R42_002374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002374 DAFVNP010000035.1 Protein Homology CDS 34102 35385 . - 0 ID=cds-HBQ7390449.1;Parent=gene-L8R42_002374;Dbxref=NCBI_GP:HBQ7390449.1;Name=HBQ7390449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=L8R42_002374;product=citrate synthase;protein_id=HBQ7390449.1;transl_table=11 DAFVNP010000035.1 tpg gene 35486 35731 . + . ID=gene-L8R42_002375;Name=L8R42_002375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002375 DAFVNP010000035.1 GeneMarkS-2+ CDS 35486 35731 . + 0 ID=cds-HBQ7390450.1;Parent=gene-L8R42_002375;Dbxref=NCBI_GP:HBQ7390450.1;Name=HBQ7390450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_002375;product=hypothetical protein;protein_id=HBQ7390450.1;transl_table=11 DAFVNP010000035.1 tpg gene 36125 36529 . + . ID=gene-L8R42_002376;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=L8R42_002376 DAFVNP010000035.1 Protein Homology CDS 36125 36529 . + 0 ID=cds-HBQ7390451.1;Parent=gene-L8R42_002376;Dbxref=NCBI_GP:HBQ7390451.1;Name=HBQ7390451.1;gbkey=CDS;gene=sdhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=L8R42_002376;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=HBQ7390451.1;transl_table=11 DAFVNP010000035.1 tpg gene 36523 36870 . + . ID=gene-L8R42_002377;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=L8R42_002377 DAFVNP010000035.1 Protein Homology CDS 36523 36870 . + 0 ID=cds-HBQ7390452.1;Parent=gene-L8R42_002377;Dbxref=NCBI_GP:HBQ7390452.1;Name=HBQ7390452.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=L8R42_002377;product=succinate dehydrogenase membrane anchor subunit;protein_id=HBQ7390452.1;transl_table=11 DAFVNP010000035.1 tpg gene 36870 38636 . + . ID=gene-L8R42_002378;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=L8R42_002378 DAFVNP010000035.1 Protein Homology CDS 36870 38636 . + 0 ID=cds-HBQ7390453.1;Parent=gene-L8R42_002378;Dbxref=NCBI_GP:HBQ7390453.1;Name=HBQ7390453.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=L8R42_002378;product=succinate dehydrogenase flavoprotein subunit;protein_id=HBQ7390453.1;transl_table=11 DAFVNP010000035.1 tpg gene 38653 39369 . + . ID=gene-L8R42_002379;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=L8R42_002379 DAFVNP010000035.1 Protein Homology CDS 38653 39369 . + 0 ID=cds-HBQ7390454.1;Parent=gene-L8R42_002379;Dbxref=NCBI_GP:HBQ7390454.1;Name=HBQ7390454.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=L8R42_002379;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=HBQ7390454.1;transl_table=11 DAFVNP010000035.1 tpg gene 39893 42694 . + . ID=gene-L8R42_002380;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=L8R42_002380 DAFVNP010000035.1 Protein Homology CDS 39893 42694 . + 0 ID=cds-HBQ7390455.1;Parent=gene-L8R42_002380;Dbxref=NCBI_GP:HBQ7390455.1;Name=HBQ7390455.1;gbkey=CDS;gene=sucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=L8R42_002380;product=2-oxoglutarate dehydrogenase E1 component;protein_id=HBQ7390455.1;transl_table=11 DAFVNP010000035.1 tpg gene 42709 43917 . + . ID=gene-L8R42_002381;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=L8R42_002381 DAFVNP010000035.1 Protein Homology CDS 42709 43917 . + 0 ID=cds-HBQ7390456.1;Parent=gene-L8R42_002381;Dbxref=NCBI_GP:HBQ7390456.1;Name=HBQ7390456.1;gbkey=CDS;gene=odhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=L8R42_002381;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=HBQ7390456.1;transl_table=11 DAFVNP010000035.1 tpg gene 44059 45225 . + . ID=gene-L8R42_002382;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=L8R42_002382 DAFVNP010000035.1 Protein Homology CDS 44059 45225 . + 0 ID=cds-HBQ7390457.1;Parent=gene-L8R42_002382;Dbxref=NCBI_GP:HBQ7390457.1;Name=HBQ7390457.1;gbkey=CDS;gene=sucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=L8R42_002382;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=HBQ7390457.1;transl_table=11 DAFVNP010000035.1 tpg gene 45225 46094 . + . ID=gene-L8R42_002383;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=L8R42_002383 DAFVNP010000035.1 Protein Homology CDS 45225 46094 . + 0 ID=cds-HBQ7390458.1;Parent=gene-L8R42_002383;Dbxref=NCBI_GP:HBQ7390458.1;Name=HBQ7390458.1;gbkey=CDS;gene=sucD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=L8R42_002383;product=succinate--CoA ligase subunit alpha;protein_id=HBQ7390458.1;transl_table=11 ##sequence-region DAFVNP010000036.1 1 46689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000036.1 tpg region 1 46689 . + . ID=DAFVNP010000036.1:1..46689;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000036.1 tpg gene 1 1098 . - . ID=gene-L8R42_002384;Name=L8R42_002384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002384;partial=true;start_range=.,1 DAFVNP010000036.1 Protein Homology CDS 1 1098 . - 0 ID=cds-HBQ7390459.1;Parent=gene-L8R42_002384;Dbxref=NCBI_GP:HBQ7390459.1;Name=HBQ7390459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=L8R42_002384;partial=true;product=AAA family ATPase;protein_id=HBQ7390459.1;start_range=.,1;transl_table=11 DAFVNP010000036.1 tpg gene 1228 1959 . - . ID=gene-L8R42_002385;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=L8R42_002385 DAFVNP010000036.1 Protein Homology CDS 1228 1959 . - 0 ID=cds-HBQ7390460.1;Parent=gene-L8R42_002385;Dbxref=NCBI_GP:HBQ7390460.1;Name=HBQ7390460.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=L8R42_002385;product=polyphenol oxidase;protein_id=HBQ7390460.1;transl_table=11 DAFVNP010000036.1 tpg gene 1956 2936 . - . ID=gene-L8R42_002386;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=L8R42_002386 DAFVNP010000036.1 Protein Homology CDS 1956 2936 . - 0 ID=cds-HBQ7390461.1;Parent=gene-L8R42_002386;Dbxref=NCBI_GP:HBQ7390461.1;Name=HBQ7390461.1;gbkey=CDS;gene=rluD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=L8R42_002386;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=HBQ7390461.1;transl_table=11 DAFVNP010000036.1 tpg gene 3068 3805 . + . ID=gene-L8R42_002387;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=L8R42_002387 DAFVNP010000036.1 Protein Homology CDS 3068 3805 . + 0 ID=cds-HBQ7390462.1;Parent=gene-L8R42_002387;Dbxref=NCBI_GP:HBQ7390462.1;Name=HBQ7390462.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=L8R42_002387;product=outer membrane protein assembly factor BamD;protein_id=HBQ7390462.1;transl_table=11 DAFVNP010000036.1 tpg gene 4077 4415 . + . ID=gene-L8R42_002388;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=L8R42_002388 DAFVNP010000036.1 Protein Homology CDS 4077 4415 . + 0 ID=cds-HBQ7390463.1;Parent=gene-L8R42_002388;Dbxref=NCBI_GP:HBQ7390463.1;Name=HBQ7390463.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=L8R42_002388;product=ribosome-associated translation inhibitor RaiA;protein_id=HBQ7390463.1;transl_table=11 DAFVNP010000036.1 cmsearch sequence_feature 4518 4643 . + . ID=id-DAFVNP010000036.1:4518..4643;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 DAFVNP010000036.1 tpg gene 4519 4566 . + . ID=gene-L8R42_002389;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=L8R42_002389 DAFVNP010000036.1 Protein Homology CDS 4519 4566 . + 0 ID=cds-HBQ7390464.1;Parent=gene-L8R42_002389;Dbxref=NCBI_GP:HBQ7390464.1;Name=HBQ7390464.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=L8R42_002389;product=pheA operon leader peptide PheL;protein_id=HBQ7390464.1;transl_table=11 DAFVNP010000036.1 tpg gene 4666 5826 . + . ID=gene-L8R42_002390;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=L8R42_002390 DAFVNP010000036.1 Protein Homology CDS 4666 5826 . + 0 ID=cds-HBQ7390465.1;Parent=gene-L8R42_002390;Dbxref=NCBI_GP:HBQ7390465.1;Name=HBQ7390465.1;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=L8R42_002390;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=HBQ7390465.1;transl_table=11 DAFVNP010000036.1 tpg gene 5787 6695 . - . ID=gene-L8R42_002391;Name=L8R42_002391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002391 DAFVNP010000036.1 Protein Homology CDS 5787 6695 . - 0 ID=cds-HBQ7390466.1;Parent=gene-L8R42_002391;Dbxref=NCBI_GP:HBQ7390466.1;Name=HBQ7390466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=L8R42_002391;product=SMP-30/gluconolactonase/LRE family protein;protein_id=HBQ7390466.1;transl_table=11 DAFVNP010000036.1 tpg gene 6753 7874 . - . ID=gene-L8R42_002392;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=L8R42_002392 DAFVNP010000036.1 Protein Homology CDS 6753 7874 . - 0 ID=cds-HBQ7390467.1;Parent=gene-L8R42_002392;Dbxref=NCBI_GP:HBQ7390467.1;Name=HBQ7390467.1;gbkey=CDS;gene=tyrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=L8R42_002392;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=HBQ7390467.1;transl_table=11 DAFVNP010000036.1 tpg gene 7884 8954 . - . ID=gene-L8R42_002393;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=L8R42_002393 DAFVNP010000036.1 Protein Homology CDS 7884 8954 . - 0 ID=cds-HBQ7390468.1;Parent=gene-L8R42_002393;Dbxref=NCBI_GP:HBQ7390468.1;Name=HBQ7390468.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=L8R42_002393;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=HBQ7390468.1;transl_table=11 DAFVNP010000036.1 tpg gene 9394 9912 . + . ID=gene-L8R42_002394;Name=L8R42_002394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002394 DAFVNP010000036.1 Protein Homology CDS 9394 9912 . + 0 ID=cds-HBQ7390469.1;Parent=gene-L8R42_002394;Dbxref=NCBI_GP:HBQ7390469.1;Name=HBQ7390469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=L8R42_002394;product=YfiR family protein;protein_id=HBQ7390469.1;transl_table=11 DAFVNP010000036.1 tpg gene 9905 11125 . + . ID=gene-L8R42_002395;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=L8R42_002395 DAFVNP010000036.1 Protein Homology CDS 9905 11125 . + 0 ID=cds-HBQ7390470.1;Parent=gene-L8R42_002395;Dbxref=NCBI_GP:HBQ7390470.1;Name=HBQ7390470.1;gbkey=CDS;gene=dgcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=L8R42_002395;product=diguanylate cyclase DgcN;protein_id=HBQ7390470.1;transl_table=11 DAFVNP010000036.1 tpg gene 11282 11629 . - . ID=gene-L8R42_002396;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=L8R42_002396 DAFVNP010000036.1 Protein Homology CDS 11282 11629 . - 0 ID=cds-HBQ7390471.1;Parent=gene-L8R42_002396;Dbxref=NCBI_GP:HBQ7390471.1;Name=HBQ7390471.1;gbkey=CDS;gene=rplS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=L8R42_002396;product=50S ribosomal protein L19;protein_id=HBQ7390471.1;transl_table=11 DAFVNP010000036.1 tpg gene 11670 12437 . - . ID=gene-L8R42_002397;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=L8R42_002397 DAFVNP010000036.1 Protein Homology CDS 11670 12437 . - 0 ID=cds-HBQ7390472.1;Parent=gene-L8R42_002397;Dbxref=NCBI_GP:HBQ7390472.1;Name=HBQ7390472.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=L8R42_002397;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=HBQ7390472.1;transl_table=11 DAFVNP010000036.1 tpg gene 12482 13030 . - . ID=gene-L8R42_002398;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=L8R42_002398 DAFVNP010000036.1 Protein Homology CDS 12482 13030 . - 0 ID=cds-HBQ7390473.1;Parent=gene-L8R42_002398;Dbxref=NCBI_GP:HBQ7390473.1;Name=HBQ7390473.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=L8R42_002398;product=ribosome maturation factor RimM;protein_id=HBQ7390473.1;transl_table=11 DAFVNP010000036.1 tpg gene 13049 13297 . - . ID=gene-L8R42_002399;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=L8R42_002399 DAFVNP010000036.1 Protein Homology CDS 13049 13297 . - 0 ID=cds-HBQ7390474.1;Parent=gene-L8R42_002399;Dbxref=NCBI_GP:HBQ7390474.1;Name=HBQ7390474.1;gbkey=CDS;gene=rpsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=L8R42_002399;product=30S ribosomal protein S16;protein_id=HBQ7390474.1;transl_table=11 DAFVNP010000036.1 tpg gene 13550 14911 . - . ID=gene-L8R42_002400;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=L8R42_002400 DAFVNP010000036.1 Protein Homology CDS 13550 14911 . - 0 ID=cds-HBQ7390475.1;Parent=gene-L8R42_002400;Dbxref=NCBI_GP:HBQ7390475.1;Name=HBQ7390475.1;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=L8R42_002400;product=signal recognition particle protein;protein_id=HBQ7390475.1;transl_table=11 DAFVNP010000036.1 tpg gene 15077 15868 . + . ID=gene-L8R42_002401;Name=L8R42_002401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002401 DAFVNP010000036.1 Protein Homology CDS 15077 15868 . + 0 ID=cds-HBQ7390476.1;Parent=gene-L8R42_002401;Dbxref=NCBI_GP:HBQ7390476.1;Name=HBQ7390476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=L8R42_002401;product=inner membrane protein YpjD;protein_id=HBQ7390476.1;transl_table=11 DAFVNP010000036.1 tpg gene 15888 17174 . + . ID=gene-L8R42_002402;Name=L8R42_002402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002402 DAFVNP010000036.1 Protein Homology CDS 15888 17174 . + 0 ID=cds-HBQ7390477.1;Parent=gene-L8R42_002402;Dbxref=NCBI_GP:HBQ7390477.1;Name=HBQ7390477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=L8R42_002402;product=HlyC/CorC family transporter;protein_id=HBQ7390477.1;transl_table=11 DAFVNP010000036.1 tpg gene 17295 17900 . + . ID=gene-L8R42_002403;Name=L8R42_002403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002403 DAFVNP010000036.1 Protein Homology CDS 17295 17900 . + 0 ID=cds-HBQ7390478.1;Parent=gene-L8R42_002403;Dbxref=NCBI_GP:HBQ7390478.1;Name=HBQ7390478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=L8R42_002403;product=cytoplasmic protein;protein_id=HBQ7390478.1;transl_table=11 DAFVNP010000036.1 tpg gene 17935 18525 . - . ID=gene-L8R42_002404;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=L8R42_002404 DAFVNP010000036.1 Protein Homology CDS 17935 18525 . - 0 ID=cds-HBQ7390479.1;Parent=gene-L8R42_002404;Dbxref=NCBI_GP:HBQ7390479.1;Name=HBQ7390479.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=L8R42_002404;product=nucleotide exchange factor GrpE;protein_id=HBQ7390479.1;transl_table=11 DAFVNP010000036.1 tpg gene 18649 19527 . + . ID=gene-L8R42_002405;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=L8R42_002405 DAFVNP010000036.1 Protein Homology CDS 18649 19527 . + 0 ID=cds-HBQ7390480.1;Parent=gene-L8R42_002405;Dbxref=NCBI_GP:HBQ7390480.1;Name=HBQ7390480.1;gbkey=CDS;gene=nadK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=L8R42_002405;product=NAD(+) kinase;protein_id=HBQ7390480.1;transl_table=11 DAFVNP010000036.1 tpg gene 19613 21274 . + . ID=gene-L8R42_002406;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=L8R42_002406 DAFVNP010000036.1 Protein Homology CDS 19613 21274 . + 0 ID=cds-HBQ7390481.1;Parent=gene-L8R42_002406;Dbxref=NCBI_GP:HBQ7390481.1;Name=HBQ7390481.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=L8R42_002406;product=DNA repair protein RecN;protein_id=HBQ7390481.1;transl_table=11 DAFVNP010000036.1 tpg gene 21423 21761 . + . ID=gene-L8R42_002407;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=L8R42_002407 DAFVNP010000036.1 Protein Homology CDS 21423 21761 . + 0 ID=cds-HBQ7390482.1;Parent=gene-L8R42_002407;Dbxref=NCBI_GP:HBQ7390482.1;Name=HBQ7390482.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=L8R42_002407;product=outer membrane protein assembly factor BamE;protein_id=HBQ7390482.1;transl_table=11 DAFVNP010000036.1 tpg gene 21922 22212 . - . ID=gene-L8R42_002408;Name=L8R42_002408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002408 DAFVNP010000036.1 Protein Homology CDS 21922 22212 . - 0 ID=cds-HBQ7390483.1;Parent=gene-L8R42_002408;Dbxref=NCBI_GP:HBQ7390483.1;Name=HBQ7390483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=L8R42_002408;product=RnfH family protein;protein_id=HBQ7390483.1;transl_table=11 DAFVNP010000036.1 tpg gene 22202 22639 . - . ID=gene-L8R42_002409;Name=L8R42_002409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002409 DAFVNP010000036.1 Protein Homology CDS 22202 22639 . - 0 ID=cds-HBQ7390484.1;Parent=gene-L8R42_002409;Dbxref=NCBI_GP:HBQ7390484.1;Name=HBQ7390484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=L8R42_002409;product=type II toxin-antitoxin system RatA family toxin;protein_id=HBQ7390484.1;transl_table=11 DAFVNP010000036.1 tpg gene 22828 23310 . + . ID=gene-L8R42_002410;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=L8R42_002410 DAFVNP010000036.1 Protein Homology CDS 22828 23310 . + 0 ID=cds-HBQ7390485.1;Parent=gene-L8R42_002410;Dbxref=NCBI_GP:HBQ7390485.1;Name=HBQ7390485.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=L8R42_002410;product=SsrA-binding protein SmpB;protein_id=HBQ7390485.1;transl_table=11 DAFVNP010000036.1 tpg gene 23930 35395 . + . ID=gene-L8R42_002411;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=L8R42_002411 DAFVNP010000036.1 Protein Homology CDS 23930 35395 . + 0 ID=cds-HBQ7390486.1;Parent=gene-L8R42_002411;Dbxref=NCBI_GP:HBQ7390486.1;Name=HBQ7390486.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=L8R42_002411;product=biofilm-associated protein BapA;protein_id=HBQ7390486.1;transl_table=11 DAFVNP010000036.1 tpg gene 35460 36869 . + . ID=gene-L8R42_002412;Name=L8R42_002412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002412 DAFVNP010000036.1 Protein Homology CDS 35460 36869 . + 0 ID=cds-HBQ7390487.1;Parent=gene-L8R42_002412;Dbxref=NCBI_GP:HBQ7390487.1;Name=HBQ7390487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=L8R42_002412;product=TolC family outer membrane protein;protein_id=HBQ7390487.1;transl_table=11 DAFVNP010000036.1 tpg gene 36866 39046 . + . ID=gene-L8R42_002413;Name=L8R42_002413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002413 DAFVNP010000036.1 Protein Homology CDS 36866 39046 . + 0 ID=cds-HBQ7390488.1;Parent=gene-L8R42_002413;Dbxref=NCBI_GP:HBQ7390488.1;Name=HBQ7390488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=L8R42_002413;product=type I secretion system permease/ATPase;protein_id=HBQ7390488.1;transl_table=11 DAFVNP010000036.1 tpg gene 39054 40217 . + . ID=gene-L8R42_002414;Name=L8R42_002414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002414 DAFVNP010000036.1 Protein Homology CDS 39054 40217 . + 0 ID=cds-HBQ7390489.1;Parent=gene-L8R42_002414;Dbxref=NCBI_GP:HBQ7390489.1;Name=HBQ7390489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=L8R42_002414;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=HBQ7390489.1;transl_table=11 DAFVNP010000036.1 tpg gene 40289 40651 . + . ID=gene-L8R42_002415;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=L8R42_002415 DAFVNP010000036.1 cmsearch tmRNA 40289 40651 . + . ID=rna-L8R42_002415;Parent=gene-L8R42_002415;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_002415;product=transfer-messenger RNA DAFVNP010000036.1 cmsearch exon 40289 40651 . + . ID=exon-L8R42_002415-1;Parent=rna-L8R42_002415;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_002415;product=transfer-messenger RNA DAFVNP010000036.1 tpg gene 40734 41339 . + . ID=gene-L8R42_002416;Name=L8R42_002416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002416 DAFVNP010000036.1 GeneMarkS-2+ CDS 40734 41339 . + 0 ID=cds-HBQ7390490.1;Parent=gene-L8R42_002416;Dbxref=NCBI_GP:HBQ7390490.1;Name=HBQ7390490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_002416;product=hypothetical protein;protein_id=HBQ7390490.1;transl_table=11 DAFVNP010000036.1 tpg gene 41274 42442 . - . ID=gene-L8R42_002417;Name=L8R42_002417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002417 DAFVNP010000036.1 Protein Homology CDS 42193 42442 . - 0 ID=cds-HBQ7390491.1;Parent=gene-L8R42_002417;Dbxref=NCBI_GP:HBQ7390491.1;Name=HBQ7390491.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=L8R42_002417;product=IS3 family transposase;protein_id=HBQ7390491.1;transl_table=11 DAFVNP010000036.1 Protein Homology CDS 41274 42193 . - 2 ID=cds-HBQ7390491.1;Parent=gene-L8R42_002417;Dbxref=NCBI_GP:HBQ7390491.1;Name=HBQ7390491.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=L8R42_002417;product=IS3 family transposase;protein_id=HBQ7390491.1;transl_table=11 DAFVNP010000036.1 tpg gene 42874 43101 . + . ID=gene-L8R42_002418;Name=L8R42_002418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002418 DAFVNP010000036.1 Protein Homology CDS 42874 43101 . + 0 ID=cds-HBQ7390492.1;Parent=gene-L8R42_002418;Dbxref=NCBI_GP:HBQ7390492.1;Name=HBQ7390492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442260.1;locus_tag=L8R42_002418;product=hypothetical protein;protein_id=HBQ7390492.1;transl_table=11 DAFVNP010000036.1 tpg gene 43132 44091 . + . ID=gene-L8R42_002419;Name=L8R42_002419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002419 DAFVNP010000036.1 Protein Homology CDS 43132 44091 . + 0 ID=cds-HBQ7390493.1;Parent=gene-L8R42_002419;Dbxref=NCBI_GP:HBQ7390493.1;Name=HBQ7390493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524528.1;locus_tag=L8R42_002419;product=RNA-directed DNA polymerase;protein_id=HBQ7390493.1;transl_table=11 DAFVNP010000036.1 tpg gene 44141 44980 . + . ID=gene-L8R42_002420;Name=L8R42_002420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002420 DAFVNP010000036.1 Protein Homology CDS 44141 44980 . + 0 ID=cds-HBQ7390494.1;Parent=gene-L8R42_002420;Dbxref=NCBI_GP:HBQ7390494.1;Name=HBQ7390494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000965625.1;locus_tag=L8R42_002420;product=nucleotide-binding protein;protein_id=HBQ7390494.1;transl_table=11 DAFVNP010000036.1 tpg gene 45605 46144 . - . ID=gene-L8R42_002421;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=L8R42_002421 DAFVNP010000036.1 Protein Homology CDS 45605 46144 . - 0 ID=cds-HBQ7390495.1;Parent=gene-L8R42_002421;Dbxref=NCBI_GP:HBQ7390495.1;Name=HBQ7390495.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=L8R42_002421;product=phase 1 flagellin gene repressor FljA;protein_id=HBQ7390495.1;transl_table=11 DAFVNP010000036.1 tpg gene 46212 46689 . - . ID=gene-L8R42_002422;Name=L8R42_002422;end_range=46689,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002422;partial=true DAFVNP010000036.1 Protein Homology CDS 46212 46689 . - 1 ID=cds-HBQ7390496.1;Parent=gene-L8R42_002422;Dbxref=NCBI_GP:HBQ7390496.1;Name=HBQ7390496.1;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes;end_range=46689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=L8R42_002422;partial=true;product=flagellin FliC;protein_id=HBQ7390496.1;transl_table=11 ##sequence-region DAFVNP010000037.1 1 42786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000037.1 tpg region 1 42786 . + . ID=DAFVNP010000037.1:1..42786;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000037.1 tpg gene 207 1304 . + . ID=gene-L8R42_002423;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=L8R42_002423 DAFVNP010000037.1 Protein Homology CDS 207 1304 . + 0 ID=cds-HBQ7390497.1;Parent=gene-L8R42_002423;Dbxref=NCBI_GP:HBQ7390497.1;Name=HBQ7390497.1;gbkey=CDS;gene=mltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=L8R42_002423;product=murein transglycosylase A;protein_id=HBQ7390497.1;transl_table=11 DAFVNP010000037.1 tpg gene 1414 2220 . + . ID=gene-L8R42_002424;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=L8R42_002424 DAFVNP010000037.1 Protein Homology CDS 1414 2220 . + 0 ID=cds-HBQ7390498.1;Parent=gene-L8R42_002424;Dbxref=NCBI_GP:HBQ7390498.1;Name=HBQ7390498.1;gbkey=CDS;gene=tcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=L8R42_002424;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=HBQ7390498.1;transl_table=11 DAFVNP010000037.1 tpg gene 2272 3159 . - . ID=gene-L8R42_002425;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=L8R42_002425 DAFVNP010000037.1 Protein Homology CDS 2272 3159 . - 0 ID=cds-HBQ7390499.1;Parent=gene-L8R42_002425;Dbxref=NCBI_GP:HBQ7390499.1;Name=HBQ7390499.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=L8R42_002425;product=EamA family transporter RarD;protein_id=HBQ7390499.1;transl_table=11 DAFVNP010000037.1 tpg gene 3459 3902 . - . ID=gene-L8R42_002426;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=L8R42_002426 DAFVNP010000037.1 Protein Homology CDS 3459 3902 . - 0 ID=cds-HBQ7390500.1;Parent=gene-L8R42_002426;Dbxref=NCBI_GP:HBQ7390500.1;Name=HBQ7390500.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184199.1;locus_tag=L8R42_002426;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=HBQ7390500.1;transl_table=11 DAFVNP010000037.1 tpg gene 3902 5107 . - . ID=gene-L8R42_002427;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=L8R42_002427 DAFVNP010000037.1 Protein Homology CDS 3902 5107 . - 0 ID=cds-HBQ7390501.1;Parent=gene-L8R42_002427;Dbxref=NCBI_GP:HBQ7390501.1;Name=HBQ7390501.1;gbkey=CDS;gene=csdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=L8R42_002427;product=cysteine desulfurase CsdA;protein_id=HBQ7390501.1;transl_table=11 DAFVNP010000037.1 tpg gene 5300 5527 . + . ID=gene-L8R42_002428;Name=L8R42_002428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002428 DAFVNP010000037.1 Protein Homology CDS 5300 5527 . + 0 ID=cds-HBQ7390502.1;Parent=gene-L8R42_002428;Dbxref=NCBI_GP:HBQ7390502.1;Name=HBQ7390502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=L8R42_002428;product=YgdI/YgdR family lipoprotein;protein_id=HBQ7390502.1;transl_table=11 DAFVNP010000037.1 tpg gene 5874 6791 . + . ID=gene-L8R42_002429;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=L8R42_002429 DAFVNP010000037.1 Protein Homology CDS 5874 6791 . + 0 ID=cds-HBQ7390503.1;Parent=gene-L8R42_002429;Dbxref=NCBI_GP:HBQ7390503.1;Name=HBQ7390503.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=L8R42_002429;product=glycine cleavage system transcriptional regulator GcvA;protein_id=HBQ7390503.1;transl_table=11 DAFVNP010000037.1 tpg gene 6810 7205 . + . ID=gene-L8R42_002430;Name=L8R42_002430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002430 DAFVNP010000037.1 Protein Homology CDS 6810 7205 . + 0 ID=cds-HBQ7390504.1;Parent=gene-L8R42_002430;Dbxref=NCBI_GP:HBQ7390504.1;Name=HBQ7390504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=L8R42_002430;product=DUF423 domain-containing protein;protein_id=HBQ7390504.1;transl_table=11 DAFVNP010000037.1 tpg gene 7198 8298 . + . ID=gene-L8R42_002431;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=L8R42_002431 DAFVNP010000037.1 Protein Homology CDS 7198 8298 . + 0 ID=cds-HBQ7390505.1;Parent=gene-L8R42_002431;Dbxref=NCBI_GP:HBQ7390505.1;Name=HBQ7390505.1;gbkey=CDS;gene=rlmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=L8R42_002431;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=HBQ7390505.1;transl_table=11 DAFVNP010000037.1 tpg gene 8357 9067 . - . ID=gene-L8R42_002432;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=L8R42_002432 DAFVNP010000037.1 Protein Homology CDS 8357 9067 . - 0 ID=cds-HBQ7390506.1;Parent=gene-L8R42_002432;Dbxref=NCBI_GP:HBQ7390506.1;Name=HBQ7390506.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=L8R42_002432;product=L-fucose operon activator;protein_id=HBQ7390506.1;transl_table=11 DAFVNP010000037.1 tpg gene 9125 9547 . - . ID=gene-L8R42_002433;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=L8R42_002433 DAFVNP010000037.1 Protein Homology CDS 9125 9547 . - 0 ID=cds-HBQ7390507.1;Parent=gene-L8R42_002433;Dbxref=NCBI_GP:HBQ7390507.1;Name=HBQ7390507.1;gbkey=CDS;gene=fucU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=L8R42_002433;product=L-fucose mutarotase;protein_id=HBQ7390507.1;transl_table=11 DAFVNP010000037.1 tpg gene 9549 10967 . - . ID=gene-L8R42_002434;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=L8R42_002434 DAFVNP010000037.1 Protein Homology CDS 9549 10967 . - 0 ID=cds-HBQ7390508.1;Parent=gene-L8R42_002434;Dbxref=NCBI_GP:HBQ7390508.1;Name=HBQ7390508.1;gbkey=CDS;gene=fucK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=L8R42_002434;product=L-fuculokinase;protein_id=HBQ7390508.1;transl_table=11 DAFVNP010000037.1 tpg gene 11068 12843 . - . ID=gene-L8R42_002435;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=L8R42_002435 DAFVNP010000037.1 Protein Homology CDS 11068 12843 . - 0 ID=cds-HBQ7390509.1;Parent=gene-L8R42_002435;Dbxref=NCBI_GP:HBQ7390509.1;Name=HBQ7390509.1;gbkey=CDS;gene=fucI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=L8R42_002435;product=L-fucose isomerase;protein_id=HBQ7390509.1;transl_table=11 DAFVNP010000037.1 tpg gene 12875 14191 . - . ID=gene-L8R42_002436;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=L8R42_002436 DAFVNP010000037.1 Protein Homology CDS 12875 14191 . - 0 ID=cds-HBQ7390510.1;Parent=gene-L8R42_002436;Dbxref=NCBI_GP:HBQ7390510.1;Name=HBQ7390510.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=L8R42_002436;product=L-fucose:H+ symporter permease;protein_id=HBQ7390510.1;transl_table=11 DAFVNP010000037.1 tpg gene 14747 15394 . + . ID=gene-L8R42_002437;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=L8R42_002437 DAFVNP010000037.1 Protein Homology CDS 14747 15394 . + 0 ID=cds-HBQ7390511.1;Parent=gene-L8R42_002437;Dbxref=NCBI_GP:HBQ7390511.1;Name=HBQ7390511.1;gbkey=CDS;gene=fucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=L8R42_002437;product=L-fuculose-phosphate aldolase;protein_id=HBQ7390511.1;transl_table=11 DAFVNP010000037.1 tpg gene 15411 16559 . + . ID=gene-L8R42_002438;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=L8R42_002438 DAFVNP010000037.1 Protein Homology CDS 15411 16559 . + 0 ID=cds-HBQ7390512.1;Parent=gene-L8R42_002438;Dbxref=NCBI_GP:HBQ7390512.1;Name=HBQ7390512.1;gbkey=CDS;gene=fucO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=L8R42_002438;product=lactaldehyde reductase;protein_id=HBQ7390512.1;transl_table=11 DAFVNP010000037.1 tpg gene 16651 17406 . - . ID=gene-L8R42_002439;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=L8R42_002439 DAFVNP010000037.1 Protein Homology CDS 16651 17406 . - 0 ID=cds-HBQ7390513.1;Parent=gene-L8R42_002439;Dbxref=NCBI_GP:HBQ7390513.1;Name=HBQ7390513.1;gbkey=CDS;gene=xni;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=L8R42_002439;product=flap endonuclease Xni;protein_id=HBQ7390513.1;transl_table=11 DAFVNP010000037.1 tpg gene 17576 18943 . - . ID=gene-L8R42_002440;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=L8R42_002440 DAFVNP010000037.1 Protein Homology CDS 17576 18943 . - 0 ID=cds-HBQ7390514.1;Parent=gene-L8R42_002440;Dbxref=NCBI_GP:HBQ7390514.1;Name=HBQ7390514.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=L8R42_002440;product=L-serine ammonia-lyase II;protein_id=HBQ7390514.1;transl_table=11 DAFVNP010000037.1 tpg gene 19002 20291 . - . ID=gene-L8R42_002441;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=L8R42_002441 DAFVNP010000037.1 Protein Homology CDS 19002 20291 . - 0 ID=cds-HBQ7390515.1;Parent=gene-L8R42_002441;Dbxref=NCBI_GP:HBQ7390515.1;Name=HBQ7390515.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=L8R42_002441;product=HAAAP family serine/threonine permease SdaC;protein_id=HBQ7390515.1;transl_table=11 DAFVNP010000037.1 tpg gene 20856 22220 . - . ID=gene-L8R42_002442;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;gene_synonym=ygdH;locus_tag=L8R42_002442 DAFVNP010000037.1 Protein Homology CDS 20856 22220 . - 0 ID=cds-HBQ7390516.1;Parent=gene-L8R42_002442;Dbxref=NCBI_GP:HBQ7390516.1;Name=HBQ7390516.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=L8R42_002442;product=nucleotide 5'-monophosphate nucleosidase;protein_id=HBQ7390516.1;transl_table=11 DAFVNP010000037.1 tpg gene 22333 23181 . - . ID=gene-L8R42_002443;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=L8R42_002443 DAFVNP010000037.1 Protein Homology CDS 22333 23181 . - 0 ID=cds-HBQ7390517.1;Parent=gene-L8R42_002443;Dbxref=NCBI_GP:HBQ7390517.1;Name=HBQ7390517.1;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=L8R42_002443;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=HBQ7390517.1;transl_table=11 DAFVNP010000037.1 tpg gene 23250 23795 . + . ID=gene-L8R42_002444;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=L8R42_002444 DAFVNP010000037.1 Protein Homology CDS 23250 23795 . + 0 ID=cds-HBQ7390518.1;Parent=gene-L8R42_002444;Dbxref=NCBI_GP:HBQ7390518.1;Name=HBQ7390518.1;gbkey=CDS;gene=syd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=L8R42_002444;product=SecY-interacting protein;protein_id=HBQ7390518.1;transl_table=11 DAFVNP010000037.1 tpg gene 24407 24736 . + . ID=gene-L8R42_002445;Name=L8R42_002445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002445 DAFVNP010000037.1 Protein Homology CDS 24407 24736 . + 0 ID=cds-HBQ7390519.1;Parent=gene-L8R42_002445;Dbxref=NCBI_GP:HBQ7390519.1;Name=HBQ7390519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=L8R42_002445;product=YqcC family protein;protein_id=HBQ7390519.1;transl_table=11 DAFVNP010000037.1 tpg gene 24736 25518 . + . ID=gene-L8R42_002446;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=L8R42_002446 DAFVNP010000037.1 Protein Homology CDS 24736 25518 . + 0 ID=cds-HBQ7390520.1;Parent=gene-L8R42_002446;Dbxref=NCBI_GP:HBQ7390520.1;Name=HBQ7390520.1;gbkey=CDS;gene=truC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461885.1;locus_tag=L8R42_002446;product=tRNA pseudouridine(65) synthase TruC;protein_id=HBQ7390520.1;transl_table=11 DAFVNP010000037.1 tpg gene 25537 25986 . + . ID=gene-L8R42_002447;Name=L8R42_002447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002447 DAFVNP010000037.1 Protein Homology CDS 25537 25986 . + 0 ID=cds-HBQ7390521.1;Parent=gene-L8R42_002447;Dbxref=NCBI_GP:HBQ7390521.1;Name=HBQ7390521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=L8R42_002447;product=flavodoxin;protein_id=HBQ7390521.1;transl_table=11 DAFVNP010000037.1 tpg gene 26468 27826 . + . ID=gene-L8R42_002448;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=L8R42_002448 DAFVNP010000037.1 Protein Homology CDS 26468 27826 . + 0 ID=cds-HBQ7390522.1;Parent=gene-L8R42_002448;Dbxref=NCBI_GP:HBQ7390522.1;Name=HBQ7390522.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=L8R42_002448;product=galactarate/glucarate/glycerate transporter GudP;protein_id=HBQ7390522.1;transl_table=11 DAFVNP010000037.1 tpg gene 27823 29163 . + . ID=gene-L8R42_002449;Name=L8R42_002449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002449 DAFVNP010000037.1 Protein Homology CDS 27823 29163 . + 0 ID=cds-HBQ7390523.1;Parent=gene-L8R42_002449;Dbxref=NCBI_GP:HBQ7390523.1;Name=HBQ7390523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=L8R42_002449;product=glucarate dehydratase;protein_id=HBQ7390523.1;transl_table=11 DAFVNP010000037.1 tpg gene 29184 30524 . + . ID=gene-L8R42_002450;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=L8R42_002450 DAFVNP010000037.1 Protein Homology CDS 29184 30524 . + 0 ID=cds-HBQ7390524.1;Parent=gene-L8R42_002450;Dbxref=NCBI_GP:HBQ7390524.1;Name=HBQ7390524.1;gbkey=CDS;gene=gudD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=L8R42_002450;product=glucarate dehydratase;protein_id=HBQ7390524.1;transl_table=11 DAFVNP010000037.1 tpg gene 30602 31744 . + . ID=gene-L8R42_002451;Name=L8R42_002451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002451 DAFVNP010000037.1 Protein Homology CDS 30602 31744 . + 0 ID=cds-HBQ7390525.1;Parent=gene-L8R42_002451;Dbxref=NCBI_GP:HBQ7390525.1;Name=HBQ7390525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=L8R42_002451;product=glycerate kinase;protein_id=HBQ7390525.1;transl_table=11 DAFVNP010000037.1 tpg gene 31788 34544 . - . ID=gene-L8R42_002452;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=L8R42_002452 DAFVNP010000037.1 Protein Homology CDS 31788 34544 . - 0 ID=cds-HBQ7390526.1;Parent=gene-L8R42_002452;Dbxref=NCBI_GP:HBQ7390526.1;Name=HBQ7390526.1;gbkey=CDS;gene=barA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=L8R42_002452;product=two-component sensor histidine kinase BarA;protein_id=HBQ7390526.1;transl_table=11 DAFVNP010000037.1 tpg gene 34602 35897 . + . ID=gene-L8R42_002453;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=L8R42_002453 DAFVNP010000037.1 Protein Homology CDS 34602 35897 . + 0 ID=cds-HBQ7390527.1;Parent=gene-L8R42_002453;Dbxref=NCBI_GP:HBQ7390527.1;Name=HBQ7390527.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=L8R42_002453;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=HBQ7390527.1;transl_table=11 DAFVNP010000037.1 tpg gene 35949 38183 . + . ID=gene-L8R42_002454;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=L8R42_002454 DAFVNP010000037.1 Protein Homology CDS 35949 38183 . + 0 ID=cds-HBQ7390528.1;Parent=gene-L8R42_002454;Dbxref=NCBI_GP:HBQ7390528.1;Name=HBQ7390528.1;gbkey=CDS;gene=relA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=L8R42_002454;product=GTP diphosphokinase;protein_id=HBQ7390528.1;transl_table=11 DAFVNP010000037.1 tpg gene 38268 38624 . + . ID=gene-L8R42_002455;Name=L8R42_002455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002455 DAFVNP010000037.1 Protein Homology CDS 38268 38624 . + 0 ID=cds-HBQ7390529.1;Parent=gene-L8R42_002455;Dbxref=NCBI_GP:HBQ7390529.1;Name=HBQ7390529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=L8R42_002455;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=HBQ7390529.1;transl_table=11 DAFVNP010000037.1 tpg gene 38590 38748 . + . ID=gene-L8R42_002456;Name=L8R42_002456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002456 DAFVNP010000037.1 Protein Homology CDS 38590 38748 . + 0 ID=cds-HBQ7390530.1;Parent=gene-L8R42_002456;Dbxref=NCBI_GP:HBQ7390530.1;Name=HBQ7390530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641033.1;locus_tag=L8R42_002456;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HBQ7390530.1;transl_table=11 DAFVNP010000037.1 tpg gene 38829 39875 . - . ID=gene-L8R42_002457;Name=L8R42_002457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002457 DAFVNP010000037.1 Protein Homology CDS 38829 39875 . - 0 ID=cds-HBQ7390531.1;Parent=gene-L8R42_002457;Dbxref=NCBI_GP:HBQ7390531.1;Name=HBQ7390531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006891452.1;locus_tag=L8R42_002457;product=hypothetical protein;protein_id=HBQ7390531.1;transl_table=11 DAFVNP010000037.1 tpg gene 39890 40975 . - . ID=gene-L8R42_002458;Name=L8R42_002458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002458 DAFVNP010000037.1 Protein Homology CDS 39890 40975 . - 0 ID=cds-HBQ7390532.1;Parent=gene-L8R42_002458;Dbxref=NCBI_GP:HBQ7390532.1;Name=HBQ7390532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188944.1;locus_tag=L8R42_002458;product=hypothetical protein;protein_id=HBQ7390532.1;transl_table=11 DAFVNP010000037.1 tpg gene 41004 41540 . - . ID=gene-L8R42_002459;Name=L8R42_002459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002459 DAFVNP010000037.1 Protein Homology CDS 41004 41540 . - 0 ID=cds-HBQ7390533.1;Parent=gene-L8R42_002459;Dbxref=NCBI_GP:HBQ7390533.1;Name=HBQ7390533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=L8R42_002459;product=fimbrial protein;protein_id=HBQ7390533.1;transl_table=11 DAFVNP010000037.1 tpg gene 41537 42007 . - . ID=gene-L8R42_002460;Name=L8R42_002460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002460 DAFVNP010000037.1 Protein Homology CDS 41537 42007 . - 0 ID=cds-HBQ7390534.1;Parent=gene-L8R42_002460;Dbxref=NCBI_GP:HBQ7390534.1;Name=HBQ7390534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=L8R42_002460;product=fimbrial protein;protein_id=HBQ7390534.1;transl_table=11 DAFVNP010000037.1 tpg gene 42022 42528 . - . ID=gene-L8R42_002461;Name=L8R42_002461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002461 DAFVNP010000037.1 Protein Homology CDS 42022 42528 . - 0 ID=cds-HBQ7390535.1;Parent=gene-L8R42_002461;Dbxref=NCBI_GP:HBQ7390535.1;Name=HBQ7390535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=L8R42_002461;product=fimbrial protein;protein_id=HBQ7390535.1;transl_table=11 DAFVNP010000037.1 tpg gene 42548 42786 . - . ID=gene-L8R42_002462;Name=L8R42_002462;end_range=42786,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002462;partial=true DAFVNP010000037.1 Protein Homology CDS 42548 42786 . - 2 ID=cds-HBQ7390536.1;Parent=gene-L8R42_002462;Dbxref=NCBI_GP:HBQ7390536.1;Name=HBQ7390536.1;end_range=42786,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=L8R42_002462;partial=true;product=fimbrial protein;protein_id=HBQ7390536.1;transl_table=11 ##sequence-region DAFVNP010000038.1 1 41775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000038.1 tpg region 1 41775 . + . ID=DAFVNP010000038.1:1..41775;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000038.1 tpg gene 130 1686 . + . ID=gene-L8R42_002463;Name=L8R42_002463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002463 DAFVNP010000038.1 Protein Homology CDS 130 1686 . + 0 ID=cds-HBQ7390537.1;Parent=gene-L8R42_002463;Dbxref=NCBI_GP:HBQ7390537.1;Name=HBQ7390537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=L8R42_002463;product=PhoPQ-activated pathogenicity-related family protein;protein_id=HBQ7390537.1;transl_table=11 DAFVNP010000038.1 tpg gene 1863 3149 . + . ID=gene-L8R42_002464;Name=L8R42_002464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002464 DAFVNP010000038.1 Protein Homology CDS 1863 3149 . + 0 ID=cds-HBQ7390538.1;Parent=gene-L8R42_002464;Dbxref=NCBI_GP:HBQ7390538.1;Name=HBQ7390538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=L8R42_002464;product=MFS transporter;protein_id=HBQ7390538.1;transl_table=11 DAFVNP010000038.1 tpg gene 3124 4149 . + . ID=gene-L8R42_002465;Name=L8R42_002465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002465 DAFVNP010000038.1 Protein Homology CDS 3124 4149 . + 0 ID=cds-HBQ7390539.1;Parent=gene-L8R42_002465;Dbxref=NCBI_GP:HBQ7390539.1;Name=HBQ7390539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=L8R42_002465;product=zinc-binding alcohol dehydrogenase family protein;protein_id=HBQ7390539.1;transl_table=11 DAFVNP010000038.1 tpg gene 4208 4999 . - . ID=gene-L8R42_002466;Name=L8R42_002466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002466 DAFVNP010000038.1 Protein Homology CDS 4208 4999 . - 0 ID=cds-HBQ7390540.1;Parent=gene-L8R42_002466;Dbxref=NCBI_GP:HBQ7390540.1;Name=HBQ7390540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=L8R42_002466;product=FadR family transcriptional regulator;protein_id=HBQ7390540.1;transl_table=11 DAFVNP010000038.1 tpg gene 5045 6136 . - . ID=gene-L8R42_002467;Name=L8R42_002467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002467 DAFVNP010000038.1 Protein Homology CDS 5045 6136 . - 0 ID=cds-HBQ7390541.1;Parent=gene-L8R42_002467;Dbxref=NCBI_GP:HBQ7390541.1;Name=HBQ7390541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=L8R42_002467;product=linear amide C-N hydrolase;protein_id=HBQ7390541.1;transl_table=11 DAFVNP010000038.1 tpg gene 6564 7667 . + . ID=gene-L8R42_002468;Name=L8R42_002468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002468 DAFVNP010000038.1 Protein Homology CDS 6564 7667 . + 0 ID=cds-HBQ7390542.1;Parent=gene-L8R42_002468;Dbxref=NCBI_GP:HBQ7390542.1;Name=HBQ7390542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=L8R42_002468;product=hydrogenase small subunit;protein_id=HBQ7390542.1;transl_table=11 DAFVNP010000038.1 tpg gene 7670 9472 . + . ID=gene-L8R42_002469;Name=L8R42_002469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002469 DAFVNP010000038.1 Protein Homology CDS 7670 9472 . + 0 ID=cds-HBQ7390543.1;Parent=gene-L8R42_002469;Dbxref=NCBI_GP:HBQ7390543.1;Name=HBQ7390543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=L8R42_002469;product=nickel-dependent hydrogenase large subunit;protein_id=HBQ7390543.1;transl_table=11 DAFVNP010000038.1 tpg gene 9423 10166 . + . ID=gene-L8R42_002470;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=L8R42_002470 DAFVNP010000038.1 Protein Homology CDS 9423 10166 . + 0 ID=cds-HBQ7390544.1;Parent=gene-L8R42_002470;Dbxref=NCBI_GP:HBQ7390544.1;Name=HBQ7390544.1;gbkey=CDS;gene=cybH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=L8R42_002470;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=HBQ7390544.1;transl_table=11 DAFVNP010000038.1 tpg gene 10172 10780 . + . ID=gene-L8R42_002471;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=L8R42_002471 DAFVNP010000038.1 Protein Homology CDS 10172 10780 . + 0 ID=cds-HBQ7390545.1;Parent=gene-L8R42_002471;Dbxref=NCBI_GP:HBQ7390545.1;Name=HBQ7390545.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=L8R42_002471;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=HBQ7390545.1;transl_table=11 DAFVNP010000038.1 tpg gene 10780 11079 . + . ID=gene-L8R42_002472;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=L8R42_002472 DAFVNP010000038.1 Protein Homology CDS 10780 11079 . + 0 ID=cds-HBQ7390546.1;Parent=gene-L8R42_002472;Dbxref=NCBI_GP:HBQ7390546.1;Name=HBQ7390546.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=L8R42_002472;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=HBQ7390546.1;transl_table=11 DAFVNP010000038.1 tpg gene 11076 11486 . + . ID=gene-L8R42_002473;Name=L8R42_002473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002473 DAFVNP010000038.1 Protein Homology CDS 11076 11486 . + 0 ID=cds-HBQ7390547.1;Parent=gene-L8R42_002473;Dbxref=NCBI_GP:HBQ7390547.1;Name=HBQ7390547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=L8R42_002473;product=hydrogenase;protein_id=HBQ7390547.1;transl_table=11 DAFVNP010000038.1 tpg gene 11504 12565 . + . ID=gene-L8R42_002474;Name=L8R42_002474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002474 DAFVNP010000038.1 Protein Homology CDS 11504 12565 . + 0 ID=cds-HBQ7390548.1;Parent=gene-L8R42_002474;Dbxref=NCBI_GP:HBQ7390548.1;Name=HBQ7390548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=L8R42_002474;product=rubredoxin;protein_id=HBQ7390548.1;transl_table=11 DAFVNP010000038.1 tpg gene 12553 13440 . + . ID=gene-L8R42_002475;Name=L8R42_002475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002475 DAFVNP010000038.1 Protein Homology CDS 12553 13440 . + 0 ID=cds-HBQ7390549.1;Parent=gene-L8R42_002475;Dbxref=NCBI_GP:HBQ7390549.1;Name=HBQ7390549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=L8R42_002475;product=ATP/GTP-binding protein;protein_id=HBQ7390549.1;transl_table=11 DAFVNP010000038.1 tpg gene 13453 13794 . + . ID=gene-L8R42_002476;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=L8R42_002476 DAFVNP010000038.1 Protein Homology CDS 13453 13794 . + 0 ID=cds-HBQ7390550.1;Parent=gene-L8R42_002476;Dbxref=NCBI_GP:HBQ7390550.1;Name=HBQ7390550.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=L8R42_002476;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HBQ7390550.1;transl_table=11 DAFVNP010000038.1 tpg gene 13935 15053 . - . ID=gene-L8R42_002477;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=L8R42_002477 DAFVNP010000038.1 Protein Homology CDS 13935 15053 . - 0 ID=cds-HBQ7390551.1;Parent=gene-L8R42_002477;Dbxref=NCBI_GP:HBQ7390551.1;Name=HBQ7390551.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=L8R42_002477;product=porin OmpC;protein_id=HBQ7390551.1;transl_table=11 DAFVNP010000038.1 tpg gene 15767 16309 . + . ID=gene-L8R42_002478;Name=L8R42_002478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002478 DAFVNP010000038.1 Protein Homology CDS 15767 16309 . + 0 ID=cds-HBQ7390552.1;Parent=gene-L8R42_002478;Dbxref=NCBI_GP:HBQ7390552.1;Name=HBQ7390552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=L8R42_002478;product=nuclear transport factor 2 family protein;protein_id=HBQ7390552.1;transl_table=11 DAFVNP010000038.1 tpg gene 16365 17312 . - . ID=gene-L8R42_002479;Name=L8R42_002479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002479 DAFVNP010000038.1 Protein Homology CDS 16365 17312 . - 0 ID=cds-HBQ7390553.1;Parent=gene-L8R42_002479;Dbxref=NCBI_GP:HBQ7390553.1;Name=HBQ7390553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460487.1;locus_tag=L8R42_002479;product=bestrophin family protein;protein_id=HBQ7390553.1;transl_table=11 DAFVNP010000038.1 tpg gene 17536 17895 . - . ID=gene-L8R42_002480;Name=L8R42_002480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002480 DAFVNP010000038.1 Protein Homology CDS 17536 17895 . - 0 ID=cds-HBQ7390554.1;Parent=gene-L8R42_002480;Dbxref=NCBI_GP:HBQ7390554.1;Name=HBQ7390554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=L8R42_002480;product=DUF4186 domain-containing protein;protein_id=HBQ7390554.1;transl_table=11 DAFVNP010000038.1 tpg gene 17895 18821 . - . ID=gene-L8R42_002481;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=L8R42_002481 DAFVNP010000038.1 Protein Homology CDS 17895 18821 . - 0 ID=cds-HBQ7390555.1;Parent=gene-L8R42_002481;Dbxref=NCBI_GP:HBQ7390555.1;Name=HBQ7390555.1;gbkey=CDS;gene=glsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=L8R42_002481;product=glutaminase B;protein_id=HBQ7390555.1;transl_table=11 DAFVNP010000038.1 tpg gene 18894 20282 . - . ID=gene-L8R42_002482;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=L8R42_002482 DAFVNP010000038.1 Protein Homology CDS 18894 20282 . - 0 ID=cds-HBQ7390556.1;Parent=gene-L8R42_002482;Dbxref=NCBI_GP:HBQ7390556.1;Name=HBQ7390556.1;gbkey=CDS;gene=sad;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=L8R42_002482;product=succinate-semialdehyde dehydrogenase;protein_id=HBQ7390556.1;transl_table=11 DAFVNP010000038.1 tpg gene 20385 21257 . + . ID=gene-L8R42_002483;Name=L8R42_002483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002483 DAFVNP010000038.1 Protein Homology CDS 20385 21257 . + 0 ID=cds-HBQ7390557.1;Parent=gene-L8R42_002483;Dbxref=NCBI_GP:HBQ7390557.1;Name=HBQ7390557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=L8R42_002483;product=LysR family transcriptional regulator;protein_id=HBQ7390557.1;transl_table=11 DAFVNP010000038.1 tpg gene 21373 22563 . + . ID=gene-L8R42_002484;Name=L8R42_002484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002484 DAFVNP010000038.1 Protein Homology CDS 21373 22563 . + 0 ID=cds-HBQ7390558.1;Parent=gene-L8R42_002484;Dbxref=NCBI_GP:HBQ7390558.1;Name=HBQ7390558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=L8R42_002484;product=sugar transporter;protein_id=HBQ7390558.1;transl_table=11 DAFVNP010000038.1 tpg gene 22610 23275 . - . ID=gene-L8R42_002485;Name=L8R42_002485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002485 DAFVNP010000038.1 Protein Homology CDS 22610 23275 . - 0 ID=cds-HBQ7390559.1;Parent=gene-L8R42_002485;Dbxref=NCBI_GP:HBQ7390559.1;Name=HBQ7390559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=L8R42_002485;product=MarC family NAAT transporter;protein_id=HBQ7390559.1;transl_table=11 DAFVNP010000038.1 tpg gene 23534 23968 . + . ID=gene-L8R42_002486;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=L8R42_002486 DAFVNP010000038.1 Protein Homology CDS 23534 23968 . + 0 ID=cds-HBQ7390560.1;Parent=gene-L8R42_002486;Dbxref=NCBI_GP:HBQ7390560.1;Name=HBQ7390560.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=L8R42_002486;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=HBQ7390560.1;transl_table=11 DAFVNP010000038.1 tpg gene 23988 24371 . + . ID=gene-L8R42_002487;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=L8R42_002487 DAFVNP010000038.1 Protein Homology CDS 23988 24371 . + 0 ID=cds-HBQ7390561.1;Parent=gene-L8R42_002487;Dbxref=NCBI_GP:HBQ7390561.1;Name=HBQ7390561.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=L8R42_002487;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=HBQ7390561.1;transl_table=11 DAFVNP010000038.1 tpg gene 24400 24615 . + . ID=gene-L8R42_002488;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=L8R42_002488 DAFVNP010000038.1 Protein Homology CDS 24400 24615 . + 0 ID=cds-HBQ7390562.1;Parent=gene-L8R42_002488;Dbxref=NCBI_GP:HBQ7390562.1;Name=HBQ7390562.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=L8R42_002488;product=multiple antibiotic resistance protein MarB;protein_id=HBQ7390562.1;transl_table=11 DAFVNP010000038.1 tpg gene 24734 25636 . - . ID=gene-L8R42_002489;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=L8R42_002489 DAFVNP010000038.1 Protein Homology CDS 24734 25636 . - 0 ID=cds-HBQ7390563.1;Parent=gene-L8R42_002489;Dbxref=NCBI_GP:HBQ7390563.1;Name=HBQ7390563.1;gbkey=CDS;gene=eamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=L8R42_002489;product=O-acetylserine/cysteine exporter;protein_id=HBQ7390563.1;transl_table=11 DAFVNP010000038.1 tpg gene 25864 27051 . + . ID=gene-L8R42_002490;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=L8R42_002490 DAFVNP010000038.1 Protein Homology CDS 25864 27051 . + 0 ID=cds-HBQ7390564.1;Parent=gene-L8R42_002490;Dbxref=NCBI_GP:HBQ7390564.1;Name=HBQ7390564.1;gbkey=CDS;gene=ydeE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=L8R42_002490;product=efflux MFS transporter YdeE;protein_id=HBQ7390564.1;transl_table=11 DAFVNP010000038.1 tpg gene 27299 27394 . + . ID=gene-L8R42_002491;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=L8R42_002491 DAFVNP010000038.1 Protein Homology CDS 27299 27394 . + 0 ID=cds-HBQ7390565.1;Parent=gene-L8R42_002491;Dbxref=NCBI_GP:HBQ7390565.1;Name=HBQ7390565.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=L8R42_002491;product=protein MgtS;protein_id=HBQ7390565.1;transl_table=11 DAFVNP010000038.1 tpg gene 27741 28133 . - . ID=gene-L8R42_002492;Name=L8R42_002492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002492 DAFVNP010000038.1 Protein Homology CDS 27741 28133 . - 0 ID=cds-HBQ7390566.1;Parent=gene-L8R42_002492;Dbxref=NCBI_GP:HBQ7390566.1;Name=HBQ7390566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=L8R42_002492;product=YdeI family stress tolerance OB fold protein;protein_id=HBQ7390566.1;transl_table=11 DAFVNP010000038.1 tpg gene 28560 29087 . + . ID=gene-L8R42_002493;Name=L8R42_002493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002493 DAFVNP010000038.1 Protein Homology CDS 28560 29087 . + 0 ID=cds-HBQ7390567.1;Parent=gene-L8R42_002493;Dbxref=NCBI_GP:HBQ7390567.1;Name=HBQ7390567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=L8R42_002493;product=2-oxo-tetronate isomerase;protein_id=HBQ7390567.1;transl_table=11 DAFVNP010000038.1 tpg gene 29207 29389 . - . ID=gene-L8R42_002494;Name=L8R42_002494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002494 DAFVNP010000038.1 Protein Homology CDS 29207 29389 . - 0 ID=cds-HBQ7390568.1;Parent=gene-L8R42_002494;Dbxref=NCBI_GP:HBQ7390568.1;Name=HBQ7390568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=L8R42_002494;product=general stress protein;protein_id=HBQ7390568.1;transl_table=11 DAFVNP010000038.1 tpg gene 29734 31776 . - . ID=gene-L8R42_002495;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=L8R42_002495 DAFVNP010000038.1 Protein Homology CDS 29734 31776 . - 0 ID=cds-HBQ7390569.1;Parent=gene-L8R42_002495;Dbxref=NCBI_GP:HBQ7390569.1;Name=HBQ7390569.1;gbkey=CDS;gene=dcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=L8R42_002495;product=peptidyl-dipeptidase Dcp;protein_id=HBQ7390569.1;transl_table=11 DAFVNP010000038.1 tpg gene 31915 32661 . + . ID=gene-L8R42_002496;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=L8R42_002496 DAFVNP010000038.1 Protein Homology CDS 31915 32661 . + 0 ID=cds-HBQ7390570.1;Parent=gene-L8R42_002496;Dbxref=NCBI_GP:HBQ7390570.1;Name=HBQ7390570.1;gbkey=CDS;gene=ydfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=L8R42_002496;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=HBQ7390570.1;transl_table=11 DAFVNP010000038.1 tpg gene 32791 33477 . + . ID=gene-L8R42_002497;Name=L8R42_002497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002497 DAFVNP010000038.1 Protein Homology CDS 32791 33477 . + 0 ID=cds-HBQ7390571.1;Parent=gene-L8R42_002497;Dbxref=NCBI_GP:HBQ7390571.1;Name=HBQ7390571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=L8R42_002497;product=GntR family transcriptional regulator;protein_id=HBQ7390571.1;transl_table=11 DAFVNP010000038.1 tpg gene 33658 33861 . + . ID=gene-L8R42_002498;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=L8R42_002498 DAFVNP010000038.1 Protein Homology CDS 33658 33861 . + 0 ID=cds-HBQ7390572.1;Parent=gene-L8R42_002498;Dbxref=NCBI_GP:HBQ7390572.1;Name=HBQ7390572.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=L8R42_002498;product=putative selenium delivery protein YdfZ;protein_id=HBQ7390572.1;transl_table=11 DAFVNP010000038.1 tpg gene 33928 35394 . - . ID=gene-L8R42_002499;Name=L8R42_002499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002499 DAFVNP010000038.1 Protein Homology CDS 33928 35394 . - 0 ID=cds-HBQ7390573.1;Parent=gene-L8R42_002499;Dbxref=NCBI_GP:HBQ7390573.1;Name=HBQ7390573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=L8R42_002499;product=mannitol dehydrogenase family protein;protein_id=HBQ7390573.1;transl_table=11 DAFVNP010000038.1 tpg gene 35538 36917 . - . ID=gene-L8R42_002500;Name=L8R42_002500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002500 DAFVNP010000038.1 Protein Homology CDS 35538 36917 . - 0 ID=cds-HBQ7390574.1;Parent=gene-L8R42_002500;Dbxref=NCBI_GP:HBQ7390574.1;Name=HBQ7390574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=L8R42_002500;product=MHS family MFS transporter;protein_id=HBQ7390574.1;transl_table=11 DAFVNP010000038.1 tpg gene 36971 37990 . - . ID=gene-L8R42_002501;Name=L8R42_002501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002501 DAFVNP010000038.1 Protein Homology CDS 36971 37990 . - 0 ID=cds-HBQ7390575.1;Parent=gene-L8R42_002501;Dbxref=NCBI_GP:HBQ7390575.1;Name=HBQ7390575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=L8R42_002501;product=Zn-dependent oxidoreductase;protein_id=HBQ7390575.1;transl_table=11 DAFVNP010000038.1 tpg gene 38001 39215 . - . ID=gene-L8R42_002502;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=L8R42_002502 DAFVNP010000038.1 Protein Homology CDS 38001 39215 . - 0 ID=cds-HBQ7390576.1;Parent=gene-L8R42_002502;Dbxref=NCBI_GP:HBQ7390576.1;Name=HBQ7390576.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=L8R42_002502;product=starvation-sensing protein RspA;protein_id=HBQ7390576.1;transl_table=11 DAFVNP010000038.1 tpg gene 39337 39663 . - . ID=gene-L8R42_002503;Name=L8R42_002503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002503 DAFVNP010000038.1 Protein Homology CDS 39337 39663 . - 0 ID=cds-HBQ7390577.1;Parent=gene-L8R42_002503;Dbxref=NCBI_GP:HBQ7390577.1;Name=HBQ7390577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=L8R42_002503;product=YnfA family protein;protein_id=HBQ7390577.1;transl_table=11 DAFVNP010000038.1 tpg gene 39816 40157 . + . ID=gene-L8R42_002504;Name=L8R42_002504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002504 DAFVNP010000038.1 Protein Homology CDS 39816 40157 . + 0 ID=cds-HBQ7390578.1;Parent=gene-L8R42_002504;Dbxref=NCBI_GP:HBQ7390578.1;Name=HBQ7390578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=L8R42_002504;product=DUF1283 family protein;protein_id=HBQ7390578.1;transl_table=11 DAFVNP010000038.1 tpg gene 40193 40753 . + . ID=gene-L8R42_002505;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=L8R42_002505 DAFVNP010000038.1 Protein Homology CDS 40193 40753 . + 0 ID=cds-HBQ7390579.1;Parent=gene-L8R42_002505;Dbxref=NCBI_GP:HBQ7390579.1;Name=HBQ7390579.1;gbkey=CDS;gene=speG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=L8R42_002505;product=spermidine N1-acetyltransferase;protein_id=HBQ7390579.1;transl_table=11 DAFVNP010000038.1 tpg gene 40794 41504 . - . ID=gene-L8R42_002506;Name=L8R42_002506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002506 DAFVNP010000038.1 Protein Homology CDS 40794 41504 . - 0 ID=cds-HBQ7390580.1;Parent=gene-L8R42_002506;Dbxref=NCBI_GP:HBQ7390580.1;Name=HBQ7390580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=L8R42_002506;product=YnfC family lipoprotein;protein_id=HBQ7390580.1;transl_table=11 DAFVNP010000038.1 tpg gene 41608 41775 . + . ID=gene-L8R42_002507;Name=L8R42_002507;end_range=41775,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002507;partial=true DAFVNP010000038.1 Protein Homology CDS 41608 41775 . + 0 ID=cds-HBQ7390581.1;Parent=gene-L8R42_002507;Dbxref=NCBI_GP:HBQ7390581.1;Name=HBQ7390581.1;end_range=41775,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=L8R42_002507;partial=true;product=DUF1161 domain-containing protein;protein_id=HBQ7390581.1;transl_table=11 ##sequence-region DAFVNP010000039.1 1 41663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000039.1 tpg region 1 41663 . + . ID=DAFVNP010000039.1:1..41663;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000039.1 tpg gene 113 499 . - . ID=gene-L8R42_002508;Name=L8R42_002508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002508 DAFVNP010000039.1 Protein Homology CDS 113 499 . - 0 ID=cds-HBQ7390582.1;Parent=gene-L8R42_002508;Dbxref=NCBI_GP:HBQ7390582.1;Name=HBQ7390582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=L8R42_002508;product=DUF3461 family protein;protein_id=HBQ7390582.1;transl_table=11 DAFVNP010000039.1 tpg gene 746 2047 . + . ID=gene-L8R42_002509;Name=L8R42_002509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002509 DAFVNP010000039.1 Protein Homology CDS 746 2047 . + 0 ID=cds-HBQ7390583.1;Parent=gene-L8R42_002509;Dbxref=NCBI_GP:HBQ7390583.1;Name=HBQ7390583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=L8R42_002509;product=MHS family MFS transporter;protein_id=HBQ7390583.1;transl_table=11 DAFVNP010000039.1 tpg gene 2084 2908 . - . ID=gene-L8R42_002510;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=L8R42_002510 DAFVNP010000039.1 Protein Homology CDS 2084 2908 . - 0 ID=cds-HBQ7390584.1;Parent=gene-L8R42_002510;Dbxref=NCBI_GP:HBQ7390584.1;Name=HBQ7390584.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=L8R42_002510;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=HBQ7390584.1;transl_table=11 DAFVNP010000039.1 tpg gene 2938 5610 . - . ID=gene-L8R42_002511;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=L8R42_002511 DAFVNP010000039.1 Protein Homology CDS 2938 5610 . - 0 ID=cds-HBQ7390585.1;Parent=gene-L8R42_002511;Dbxref=NCBI_GP:HBQ7390585.1;Name=HBQ7390585.1;gbkey=CDS;gene=glnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=L8R42_002511;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=HBQ7390585.1;transl_table=11 DAFVNP010000039.1 tpg gene 5848 6642 . - . ID=gene-L8R42_002512;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=L8R42_002512 DAFVNP010000039.1 Protein Homology CDS 5848 6642 . - 0 ID=cds-HBQ7390586.1;Parent=gene-L8R42_002512;Dbxref=NCBI_GP:HBQ7390586.1;Name=HBQ7390586.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=L8R42_002512;product=type I methionyl aminopeptidase;protein_id=HBQ7390586.1;transl_table=11 DAFVNP010000039.1 tpg gene 7093 7818 . + . ID=gene-L8R42_002513;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=L8R42_002513 DAFVNP010000039.1 Protein Homology CDS 7093 7818 . + 0 ID=cds-HBQ7390587.1;Parent=gene-L8R42_002513;Dbxref=NCBI_GP:HBQ7390587.1;Name=HBQ7390587.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=L8R42_002513;product=30S ribosomal protein S2;protein_id=HBQ7390587.1;transl_table=11 DAFVNP010000039.1 tpg gene 8076 8927 . + . ID=gene-L8R42_002514;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=L8R42_002514 DAFVNP010000039.1 Protein Homology CDS 8076 8927 . + 0 ID=cds-HBQ7390588.1;Parent=gene-L8R42_002514;Dbxref=NCBI_GP:HBQ7390588.1;Name=HBQ7390588.1;gbkey=CDS;gene=tsf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=L8R42_002514;product=elongation factor Ts;protein_id=HBQ7390588.1;transl_table=11 DAFVNP010000039.1 tpg gene 9072 9797 . + . ID=gene-L8R42_002515;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=L8R42_002515 DAFVNP010000039.1 Protein Homology CDS 9072 9797 . + 0 ID=cds-HBQ7390589.1;Parent=gene-L8R42_002515;Dbxref=NCBI_GP:HBQ7390589.1;Name=HBQ7390589.1;gbkey=CDS;gene=pyrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=L8R42_002515;product=UMP kinase;protein_id=HBQ7390589.1;transl_table=11 DAFVNP010000039.1 tpg gene 9944 10501 . + . ID=gene-L8R42_002516;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=L8R42_002516 DAFVNP010000039.1 Protein Homology CDS 9944 10501 . + 0 ID=cds-HBQ7390590.1;Parent=gene-L8R42_002516;Dbxref=NCBI_GP:HBQ7390590.1;Name=HBQ7390590.1;gbkey=CDS;gene=frr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=L8R42_002516;product=ribosome recycling factor;protein_id=HBQ7390590.1;transl_table=11 DAFVNP010000039.1 tpg gene 10643 11839 . + . ID=gene-L8R42_002517;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=L8R42_002517 DAFVNP010000039.1 Protein Homology CDS 10643 11839 . + 0 ID=cds-HBQ7390591.1;Parent=gene-L8R42_002517;Dbxref=NCBI_GP:HBQ7390591.1;Name=HBQ7390591.1;gbkey=CDS;gene=ispC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=L8R42_002517;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=HBQ7390591.1;transl_table=11 DAFVNP010000039.1 tpg gene 12152 12910 . + . ID=gene-L8R42_002518;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=L8R42_002518 DAFVNP010000039.1 Protein Homology CDS 12152 12910 . + 0 ID=cds-HBQ7390592.1;Parent=gene-L8R42_002518;Dbxref=NCBI_GP:HBQ7390592.1;Name=HBQ7390592.1;gbkey=CDS;gene=ispU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=L8R42_002518;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=HBQ7390592.1;transl_table=11 DAFVNP010000039.1 tpg gene 12923 13780 . + . ID=gene-L8R42_002519;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=L8R42_002519 DAFVNP010000039.1 Protein Homology CDS 12923 13780 . + 0 ID=cds-HBQ7390593.1;Parent=gene-L8R42_002519;Dbxref=NCBI_GP:HBQ7390593.1;Name=HBQ7390593.1;gbkey=CDS;gene=cdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=L8R42_002519;product=phosphatidate cytidylyltransferase;protein_id=HBQ7390593.1;transl_table=11 DAFVNP010000039.1 tpg gene 13792 15144 . + . ID=gene-L8R42_002520;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=L8R42_002520 DAFVNP010000039.1 Protein Homology CDS 13792 15144 . + 0 ID=cds-HBQ7390594.1;Parent=gene-L8R42_002520;Dbxref=NCBI_GP:HBQ7390594.1;Name=HBQ7390594.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=L8R42_002520;product=sigma E protease regulator RseP;protein_id=HBQ7390594.1;transl_table=11 DAFVNP010000039.1 tpg gene 15176 17587 . + . ID=gene-L8R42_002521;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=L8R42_002521 DAFVNP010000039.1 Protein Homology CDS 15176 17587 . + 0 ID=cds-HBQ7390595.1;Parent=gene-L8R42_002521;Dbxref=NCBI_GP:HBQ7390595.1;Name=HBQ7390595.1;gbkey=CDS;gene=bamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=L8R42_002521;product=outer membrane protein assembly factor BamA;protein_id=HBQ7390595.1;transl_table=11 DAFVNP010000039.1 tpg gene 17710 18195 . + . ID=gene-L8R42_002522;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=L8R42_002522 DAFVNP010000039.1 Protein Homology CDS 17710 18195 . + 0 ID=cds-HBQ7390596.1;Parent=gene-L8R42_002522;Dbxref=NCBI_GP:HBQ7390596.1;Name=HBQ7390596.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=L8R42_002522;product=molecular chaperone Skp;protein_id=HBQ7390596.1;transl_table=11 DAFVNP010000039.1 tpg gene 18199 19224 . + . ID=gene-L8R42_002523;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=L8R42_002523 DAFVNP010000039.1 Protein Homology CDS 18199 19224 . + 0 ID=cds-HBQ7390597.1;Parent=gene-L8R42_002523;Dbxref=NCBI_GP:HBQ7390597.1;Name=HBQ7390597.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=L8R42_002523;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=HBQ7390597.1;transl_table=11 DAFVNP010000039.1 tpg gene 19330 19785 . + . ID=gene-L8R42_002524;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=L8R42_002524 DAFVNP010000039.1 Protein Homology CDS 19330 19785 . + 0 ID=cds-HBQ7390598.1;Parent=gene-L8R42_002524;Dbxref=NCBI_GP:HBQ7390598.1;Name=HBQ7390598.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=L8R42_002524;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=HBQ7390598.1;transl_table=11 DAFVNP010000039.1 tpg gene 19789 20577 . + . ID=gene-L8R42_002525;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=L8R42_002525 DAFVNP010000039.1 Protein Homology CDS 19789 20577 . + 0 ID=cds-HBQ7390599.1;Parent=gene-L8R42_002525;Dbxref=NCBI_GP:HBQ7390599.1;Name=HBQ7390599.1;gbkey=CDS;gene=lpxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=L8R42_002525;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=HBQ7390599.1;transl_table=11 DAFVNP010000039.1 tpg gene 20577 21725 . + . ID=gene-L8R42_002526;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=L8R42_002526 DAFVNP010000039.1 Protein Homology CDS 20577 21725 . + 0 ID=cds-HBQ7390600.1;Parent=gene-L8R42_002526;Dbxref=NCBI_GP:HBQ7390600.1;Name=HBQ7390600.1;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=L8R42_002526;product=lipid-A-disaccharide synthase;protein_id=HBQ7390600.1;transl_table=11 DAFVNP010000039.1 tpg gene 21722 22318 . + . ID=gene-L8R42_002527;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=L8R42_002527 DAFVNP010000039.1 Protein Homology CDS 21722 22318 . + 0 ID=cds-HBQ7390601.1;Parent=gene-L8R42_002527;Dbxref=NCBI_GP:HBQ7390601.1;Name=HBQ7390601.1;gbkey=CDS;gene=rnhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=L8R42_002527;product=ribonuclease HII;protein_id=HBQ7390601.1;transl_table=11 DAFVNP010000039.1 tpg gene 22342 25824 . + . ID=gene-L8R42_002528;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=L8R42_002528 DAFVNP010000039.1 Protein Homology CDS 22342 25824 . + 0 ID=cds-HBQ7390602.1;Parent=gene-L8R42_002528;Dbxref=NCBI_GP:HBQ7390602.1;Name=HBQ7390602.1;gbkey=CDS;gene=dnaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=L8R42_002528;product=DNA polymerase III subunit alpha;protein_id=HBQ7390602.1;transl_table=11 DAFVNP010000039.1 tpg gene 25837 26796 . + . ID=gene-L8R42_002529;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=L8R42_002529 DAFVNP010000039.1 Protein Homology CDS 25837 26796 . + 0 ID=cds-HBQ7390603.1;Parent=gene-L8R42_002529;Dbxref=NCBI_GP:HBQ7390603.1;Name=HBQ7390603.1;gbkey=CDS;gene=accA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=L8R42_002529;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=HBQ7390603.1;transl_table=11 DAFVNP010000039.1 tpg gene 26976 28739 . + . ID=gene-L8R42_002530;Name=L8R42_002530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002530 DAFVNP010000039.1 Protein Homology CDS 26976 28739 . + 0 ID=cds-HBQ7390604.1;Parent=gene-L8R42_002530;Dbxref=NCBI_GP:HBQ7390604.1;Name=HBQ7390604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=L8R42_002530;product=chitinase;protein_id=HBQ7390604.1;transl_table=11 DAFVNP010000039.1 tpg gene 28815 30956 . + . ID=gene-L8R42_002531;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=L8R42_002531 DAFVNP010000039.1 Protein Homology CDS 28815 30956 . + 0 ID=cds-HBQ7390605.1;Parent=gene-L8R42_002531;Dbxref=NCBI_GP:HBQ7390605.1;Name=HBQ7390605.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=L8R42_002531;product=lysine decarboxylase LdcC;protein_id=HBQ7390605.1;transl_table=11 DAFVNP010000039.1 tpg gene 31012 31401 . + . ID=gene-L8R42_002532;Name=L8R42_002532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002532 DAFVNP010000039.1 Protein Homology CDS 31012 31401 . + 0 ID=cds-HBQ7390606.1;Parent=gene-L8R42_002532;Dbxref=NCBI_GP:HBQ7390606.1;Name=HBQ7390606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=L8R42_002532;product=VOC family protein;protein_id=HBQ7390606.1;transl_table=11 DAFVNP010000039.1 tpg gene 31464 32756 . + . ID=gene-L8R42_002533;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=L8R42_002533 DAFVNP010000039.1 Protein Homology CDS 31464 32756 . + 0 ID=cds-HBQ7390607.1;Parent=gene-L8R42_002533;Dbxref=NCBI_GP:HBQ7390607.1;Name=HBQ7390607.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=L8R42_002533;product=tRNA lysidine(34) synthetase TilS;protein_id=HBQ7390607.1;transl_table=11 DAFVNP010000039.1 tpg gene 32840 33100 . - . ID=gene-L8R42_002534;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=L8R42_002534 DAFVNP010000039.1 Protein Homology CDS 32840 33100 . - 0 ID=cds-HBQ7390608.1;Parent=gene-L8R42_002534;Dbxref=NCBI_GP:HBQ7390608.1;Name=HBQ7390608.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=L8R42_002534;product=Rho-binding antiterminator;protein_id=HBQ7390608.1;transl_table=11 DAFVNP010000039.1 tpg gene 33087 33287 . - . ID=gene-L8R42_002535;Name=L8R42_002535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002535 DAFVNP010000039.1 Protein Homology CDS 33087 33287 . - 0 ID=cds-HBQ7390609.1;Parent=gene-L8R42_002535;Dbxref=NCBI_GP:HBQ7390609.1;Name=HBQ7390609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=L8R42_002535;product=YaeP family protein;protein_id=HBQ7390609.1;transl_table=11 DAFVNP010000039.1 tpg gene 33485 34030 . + . ID=gene-L8R42_002536;Name=L8R42_002536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002536 DAFVNP010000039.1 Protein Homology CDS 33485 34030 . + 0 ID=cds-HBQ7390610.1;Parent=gene-L8R42_002536;Dbxref=NCBI_GP:HBQ7390610.1;Name=HBQ7390610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=L8R42_002536;product=YaeQ family protein;protein_id=HBQ7390610.1;transl_table=11 DAFVNP010000039.1 tpg gene 34027 34449 . + . ID=gene-L8R42_002537;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=L8R42_002537 DAFVNP010000039.1 Protein Homology CDS 34027 34449 . + 0 ID=cds-HBQ7390611.1;Parent=gene-L8R42_002537;Dbxref=NCBI_GP:HBQ7390611.1;Name=HBQ7390611.1;gbkey=CDS;gene=arfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=L8R42_002537;product=aminoacyl-tRNA hydrolase;protein_id=HBQ7390611.1;transl_table=11 DAFVNP010000039.1 tpg gene 34481 35182 . + . ID=gene-L8R42_002538;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=L8R42_002538 DAFVNP010000039.1 Protein Homology CDS 34481 35182 . + 0 ID=cds-HBQ7390612.1;Parent=gene-L8R42_002538;Dbxref=NCBI_GP:HBQ7390612.1;Name=HBQ7390612.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=L8R42_002538;product=envelope stress response activation lipoprotein NlpE;protein_id=HBQ7390612.1;transl_table=11 DAFVNP010000039.1 tpg gene 35256 36974 . - . ID=gene-L8R42_002539;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=L8R42_002539 DAFVNP010000039.1 Protein Homology CDS 35256 36974 . - 0 ID=cds-HBQ7390613.1;Parent=gene-L8R42_002539;Dbxref=NCBI_GP:HBQ7390613.1;Name=HBQ7390613.1;gbkey=CDS;gene=proS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=L8R42_002539;product=proline--tRNA ligase;protein_id=HBQ7390613.1;transl_table=11 DAFVNP010000039.1 tpg gene 37085 37792 . - . ID=gene-L8R42_002540;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=L8R42_002540 DAFVNP010000039.1 Protein Homology CDS 37085 37792 . - 0 ID=cds-HBQ7390614.1;Parent=gene-L8R42_002540;Dbxref=NCBI_GP:HBQ7390614.1;Name=HBQ7390614.1;gbkey=CDS;gene=tsaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=L8R42_002540;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=HBQ7390614.1;transl_table=11 DAFVNP010000039.1 tpg gene 37789 38193 . - . ID=gene-L8R42_002541;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=L8R42_002541 DAFVNP010000039.1 Protein Homology CDS 37789 38193 . - 0 ID=cds-HBQ7390615.1;Parent=gene-L8R42_002541;Dbxref=NCBI_GP:HBQ7390615.1;Name=HBQ7390615.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=L8R42_002541;product=Rcs stress response system protein RcsF;protein_id=HBQ7390615.1;transl_table=11 DAFVNP010000039.1 tpg gene 38312 39127 . - . ID=gene-L8R42_002542;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=L8R42_002542 DAFVNP010000039.1 Protein Homology CDS 38312 39127 . - 0 ID=cds-HBQ7390616.1;Parent=gene-L8R42_002542;Dbxref=NCBI_GP:HBQ7390616.1;Name=HBQ7390616.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=L8R42_002542;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=HBQ7390616.1;transl_table=11 DAFVNP010000039.1 tpg gene 39166 39819 . - . ID=gene-L8R42_002543;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=L8R42_002543 DAFVNP010000039.1 Protein Homology CDS 39166 39819 . - 0 ID=cds-HBQ7390617.1;Parent=gene-L8R42_002543;Dbxref=NCBI_GP:HBQ7390617.1;Name=HBQ7390617.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=L8R42_002543;product=methionine ABC transporter permease MetI;protein_id=HBQ7390617.1;transl_table=11 DAFVNP010000039.1 tpg gene 39812 40843 . - . ID=gene-L8R42_002544;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=L8R42_002544 DAFVNP010000039.1 Protein Homology CDS 39812 40843 . - 0 ID=cds-HBQ7390618.1;Parent=gene-L8R42_002544;Dbxref=NCBI_GP:HBQ7390618.1;Name=HBQ7390618.1;gbkey=CDS;gene=metN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=L8R42_002544;product=methionine ABC transporter ATP-binding protein MetN;protein_id=HBQ7390618.1;transl_table=11 DAFVNP010000039.1 tpg gene 41033 41599 . + . ID=gene-L8R42_002545;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=L8R42_002545 DAFVNP010000039.1 Protein Homology CDS 41033 41599 . + 0 ID=cds-HBQ7390619.1;Parent=gene-L8R42_002545;Dbxref=NCBI_GP:HBQ7390619.1;Name=HBQ7390619.1;gbkey=CDS;gene=gmhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=L8R42_002545;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=HBQ7390619.1;transl_table=11 ##sequence-region DAFVNP010000040.1 1 40150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000040.1 tpg region 1 40150 . + . ID=DAFVNP010000040.1:1..40150;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000040.1 tpg gene 1 639 . + . ID=gene-L8R42_002546;Name=L8R42_002546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002546;partial=true;start_range=.,1 DAFVNP010000040.1 Protein Homology CDS 1 639 . + 0 ID=cds-HBQ7390620.1;Parent=gene-L8R42_002546;Dbxref=NCBI_GP:HBQ7390620.1;Name=HBQ7390620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=L8R42_002546;partial=true;product=Cof-type HAD-IIB family hydrolase;protein_id=HBQ7390620.1;start_range=.,1;transl_table=11 DAFVNP010000040.1 tpg gene 717 3149 . - . ID=gene-L8R42_002547;Name=L8R42_002547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002547 DAFVNP010000040.1 Protein Homology CDS 717 3149 . - 0 ID=cds-HBQ7390621.1;Parent=gene-L8R42_002547;Dbxref=NCBI_GP:HBQ7390621.1;Name=HBQ7390621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=L8R42_002547;product=glycyl radical protein;protein_id=HBQ7390621.1;transl_table=11 DAFVNP010000040.1 tpg gene 3155 4054 . - . ID=gene-L8R42_002548;Name=L8R42_002548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002548 DAFVNP010000040.1 Protein Homology CDS 3155 4054 . - 0 ID=cds-HBQ7390622.1;Parent=gene-L8R42_002548;Dbxref=NCBI_GP:HBQ7390622.1;Name=HBQ7390622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=L8R42_002548;product=glycyl-radical enzyme activating protein;protein_id=HBQ7390622.1;transl_table=11 DAFVNP010000040.1 tpg gene 4332 5081 . - . ID=gene-L8R42_002549;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=L8R42_002549 DAFVNP010000040.1 Protein Homology CDS 4332 5081 . - 0 ID=cds-HBQ7390623.1;Parent=gene-L8R42_002549;Dbxref=NCBI_GP:HBQ7390623.1;Name=HBQ7390623.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=L8R42_002549;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=HBQ7390623.1;transl_table=11 DAFVNP010000040.1 tpg gene 5081 6316 . - . ID=gene-L8R42_002550;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=L8R42_002550 DAFVNP010000040.1 Protein Homology CDS 5081 6316 . - 0 ID=cds-HBQ7390624.1;Parent=gene-L8R42_002550;Dbxref=NCBI_GP:HBQ7390624.1;Name=HBQ7390624.1;gbkey=CDS;gene=moeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=L8R42_002550;product=molybdopterin molybdotransferase MoeA;protein_id=HBQ7390624.1;transl_table=11 DAFVNP010000040.1 tpg gene 6520 7461 . + . ID=gene-L8R42_002551;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=L8R42_002551 DAFVNP010000040.1 Protein Homology CDS 6520 7461 . + 0 ID=cds-HBQ7390625.1;Parent=gene-L8R42_002551;Dbxref=NCBI_GP:HBQ7390625.1;Name=HBQ7390625.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=L8R42_002551;product=beta-aspartyl-peptidase;protein_id=HBQ7390625.1;transl_table=11 DAFVNP010000040.1 tpg gene 7472 9343 . + . ID=gene-L8R42_002552;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=L8R42_002552 DAFVNP010000040.1 Protein Homology CDS 7472 9343 . + 0 ID=cds-HBQ7390626.1;Parent=gene-L8R42_002552;Dbxref=NCBI_GP:HBQ7390626.1;Name=HBQ7390626.1;gbkey=CDS;gene=gsiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=L8R42_002552;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=HBQ7390626.1;transl_table=11 DAFVNP010000040.1 tpg gene 9376 10914 . + . ID=gene-L8R42_002553;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=L8R42_002553 DAFVNP010000040.1 Protein Homology CDS 9376 10914 . + 0 ID=cds-HBQ7390627.1;Parent=gene-L8R42_002553;Dbxref=NCBI_GP:HBQ7390627.1;Name=HBQ7390627.1;gbkey=CDS;gene=gsiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=L8R42_002553;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=HBQ7390627.1;transl_table=11 DAFVNP010000040.1 tpg gene 10975 11895 . + . ID=gene-L8R42_002554;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=L8R42_002554 DAFVNP010000040.1 Protein Homology CDS 10975 11895 . + 0 ID=cds-HBQ7390628.1;Parent=gene-L8R42_002554;Dbxref=NCBI_GP:HBQ7390628.1;Name=HBQ7390628.1;gbkey=CDS;gene=gsiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=L8R42_002554;product=glutathione ABC transporter permease GsiC;protein_id=HBQ7390628.1;transl_table=11 DAFVNP010000040.1 tpg gene 11898 12809 . + . ID=gene-L8R42_002555;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=L8R42_002555 DAFVNP010000040.1 Protein Homology CDS 11898 12809 . + 0 ID=cds-HBQ7390629.1;Parent=gene-L8R42_002555;Dbxref=NCBI_GP:HBQ7390629.1;Name=HBQ7390629.1;gbkey=CDS;gene=gsiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=L8R42_002555;product=glutathione ABC transporter permease GsiD;protein_id=HBQ7390629.1;transl_table=11 DAFVNP010000040.1 tpg gene 12900 14225 . - . ID=gene-L8R42_002556;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=L8R42_002556 DAFVNP010000040.1 Protein Homology CDS 12900 14225 . - 0 ID=cds-HBQ7390630.1;Parent=gene-L8R42_002556;Dbxref=NCBI_GP:HBQ7390630.1;Name=HBQ7390630.1;gbkey=CDS;gene=rimO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=L8R42_002556;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=HBQ7390630.1;transl_table=11 DAFVNP010000040.1 tpg gene 14456 14839 . + . ID=gene-L8R42_002557;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=L8R42_002557 DAFVNP010000040.1 Protein Homology CDS 14456 14839 . + 0 ID=cds-HBQ7390631.1;Parent=gene-L8R42_002557;Dbxref=NCBI_GP:HBQ7390631.1;Name=HBQ7390631.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=L8R42_002557;product=biofilm formation regulator BssR;protein_id=HBQ7390631.1;transl_table=11 DAFVNP010000040.1 tpg gene 14958 16079 . + . ID=gene-L8R42_002558;Name=L8R42_002558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002558 DAFVNP010000040.1 Protein Homology CDS 14958 16079 . + 0 ID=cds-HBQ7390632.1;Parent=gene-L8R42_002558;Dbxref=NCBI_GP:HBQ7390632.1;Name=HBQ7390632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=L8R42_002558;product=PQQ-dependent sugar dehydrogenase;protein_id=HBQ7390632.1;transl_table=11 DAFVNP010000040.1 tpg gene 16076 16702 . - . ID=gene-L8R42_002559;Name=L8R42_002559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002559 DAFVNP010000040.1 Protein Homology CDS 16076 16702 . - 0 ID=cds-HBQ7390633.1;Parent=gene-L8R42_002559;Dbxref=NCBI_GP:HBQ7390633.1;Name=HBQ7390633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=L8R42_002559;product=glutathione S-transferase family protein;protein_id=HBQ7390633.1;transl_table=11 DAFVNP010000040.1 tpg gene 16946 18148 . + . ID=gene-L8R42_002560;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=L8R42_002560 DAFVNP010000040.1 Protein Homology CDS 16946 18148 . + 0 ID=cds-HBQ7390634.1;Parent=gene-L8R42_002560;Dbxref=NCBI_GP:HBQ7390634.1;Name=HBQ7390634.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=L8R42_002560;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=HBQ7390634.1;transl_table=11 DAFVNP010000040.1 tpg gene 18193 18951 . - . ID=gene-L8R42_002561;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=L8R42_002561 DAFVNP010000040.1 Protein Homology CDS 18193 18951 . - 0 ID=cds-HBQ7390635.1;Parent=gene-L8R42_002561;Dbxref=NCBI_GP:HBQ7390635.1;Name=HBQ7390635.1;gbkey=CDS;gene=deoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=L8R42_002561;product=DNA-binding transcriptional repressor DeoR;protein_id=HBQ7390635.1;transl_table=11 DAFVNP010000040.1 tpg gene 19023 19631 . - . ID=gene-L8R42_002562;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=L8R42_002562 DAFVNP010000040.1 Protein Homology CDS 19023 19631 . - 0 ID=cds-HBQ7390636.1;Parent=gene-L8R42_002562;Dbxref=NCBI_GP:HBQ7390636.1;Name=HBQ7390636.1;gbkey=CDS;gene=ybjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=L8R42_002562;product=undecaprenyl-diphosphate phosphatase;protein_id=HBQ7390636.1;transl_table=11 DAFVNP010000040.1 tpg gene 19944 21176 . + . ID=gene-L8R42_002563;Name=L8R42_002563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002563 DAFVNP010000040.1 Protein Homology CDS 19944 21176 . + 0 ID=cds-HBQ7390637.1;Parent=gene-L8R42_002563;Dbxref=NCBI_GP:HBQ7390637.1;Name=HBQ7390637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=L8R42_002563;product=MFS transporter;protein_id=HBQ7390637.1;transl_table=11 DAFVNP010000040.1 tpg gene 21230 22045 . - . ID=gene-L8R42_002564;Name=L8R42_002564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002564 DAFVNP010000040.1 Protein Homology CDS 21230 22045 . - 0 ID=cds-HBQ7390638.1;Parent=gene-L8R42_002564;Dbxref=NCBI_GP:HBQ7390638.1;Name=HBQ7390638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=L8R42_002564;product=HAD family hydrolase;protein_id=HBQ7390638.1;transl_table=11 DAFVNP010000040.1 tpg gene 22042 23253 . - . ID=gene-L8R42_002565;Name=L8R42_002565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002565 DAFVNP010000040.1 Protein Homology CDS 22042 23253 . - 0 ID=cds-HBQ7390639.1;Parent=gene-L8R42_002565;Dbxref=NCBI_GP:HBQ7390639.1;Name=HBQ7390639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=L8R42_002565;product=MFS transporter;protein_id=HBQ7390639.1;transl_table=11 DAFVNP010000040.1 tpg gene 23421 24041 . + . ID=gene-L8R42_002566;Name=L8R42_002566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002566 DAFVNP010000040.1 Protein Homology CDS 23421 24041 . + 0 ID=cds-HBQ7390640.1;Parent=gene-L8R42_002566;Dbxref=NCBI_GP:HBQ7390640.1;Name=HBQ7390640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=L8R42_002566;product=TetR/AcrR family transcriptional regulator;protein_id=HBQ7390640.1;transl_table=11 DAFVNP010000040.1 tpg gene 24158 25843 . - . ID=gene-L8R42_002567;Name=L8R42_002567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002567 DAFVNP010000040.1 Protein Homology CDS 24158 25843 . - 0 ID=cds-HBQ7390641.1;Parent=gene-L8R42_002567;Dbxref=NCBI_GP:HBQ7390641.1;Name=HBQ7390641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=L8R42_002567;product=aspartate:alanine antiporter;protein_id=HBQ7390641.1;transl_table=11 DAFVNP010000040.1 tpg gene 26114 26491 . + . ID=gene-L8R42_002568;Name=L8R42_002568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002568 DAFVNP010000040.1 Protein Homology CDS 26114 26491 . + 0 ID=cds-HBQ7390642.1;Parent=gene-L8R42_002568;Dbxref=NCBI_GP:HBQ7390642.1;Name=HBQ7390642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=L8R42_002568;product=inner membrane protein YbjM;protein_id=HBQ7390642.1;transl_table=11 DAFVNP010000040.1 tpg gene 26523 26786 . - . ID=gene-L8R42_002569;Name=L8R42_002569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002569 DAFVNP010000040.1 Protein Homology CDS 26523 26786 . - 0 ID=cds-HBQ7390643.1;Parent=gene-L8R42_002569;Dbxref=NCBI_GP:HBQ7390643.1;Name=HBQ7390643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=L8R42_002569;product=GrxA family glutaredoxin;protein_id=HBQ7390643.1;transl_table=11 DAFVNP010000040.1 tpg gene 26956 27246 . + . ID=gene-L8R42_002570;Name=L8R42_002570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002570 DAFVNP010000040.1 Protein Homology CDS 26956 27246 . + 0 ID=cds-HBQ7390644.1;Parent=gene-L8R42_002570;Dbxref=NCBI_GP:HBQ7390644.1;Name=HBQ7390644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=L8R42_002570;product=YbjC family protein;protein_id=HBQ7390644.1;transl_table=11 DAFVNP010000040.1 tpg gene 27230 27952 . + . ID=gene-L8R42_002571;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=L8R42_002571 DAFVNP010000040.1 Protein Homology CDS 27230 27952 . + 0 ID=cds-HBQ7390645.1;Parent=gene-L8R42_002571;Dbxref=NCBI_GP:HBQ7390645.1;Name=HBQ7390645.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=L8R42_002571;product=nitroreductase NfsA;protein_id=HBQ7390645.1;transl_table=11 DAFVNP010000040.1 tpg gene 28010 28912 . + . ID=gene-L8R42_002572;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=L8R42_002572 DAFVNP010000040.1 Protein Homology CDS 28010 28912 . + 0 ID=cds-HBQ7390646.1;Parent=gene-L8R42_002572;Dbxref=NCBI_GP:HBQ7390646.1;Name=HBQ7390646.1;gbkey=CDS;gene=rimK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=L8R42_002572;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=HBQ7390646.1;transl_table=11 DAFVNP010000040.1 tpg gene 29009 29485 . + . ID=gene-L8R42_002573;Name=L8R42_002573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002573 DAFVNP010000040.1 Protein Homology CDS 29009 29485 . + 0 ID=cds-HBQ7390647.1;Parent=gene-L8R42_002573;Dbxref=NCBI_GP:HBQ7390647.1;Name=HBQ7390647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=L8R42_002573;product=YbjN domain-containing protein;protein_id=HBQ7390647.1;transl_table=11 DAFVNP010000040.1 tpg gene 29834 30946 . + . ID=gene-L8R42_002574;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=L8R42_002574 DAFVNP010000040.1 Protein Homology CDS 29834 30946 . + 0 ID=cds-HBQ7390648.1;Parent=gene-L8R42_002574;Dbxref=NCBI_GP:HBQ7390648.1;Name=HBQ7390648.1;gbkey=CDS;gene=potF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=L8R42_002574;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=HBQ7390648.1;transl_table=11 DAFVNP010000040.1 tpg gene 31034 32167 . + . ID=gene-L8R42_002575;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=L8R42_002575 DAFVNP010000040.1 Protein Homology CDS 31034 32167 . + 0 ID=cds-HBQ7390649.1;Parent=gene-L8R42_002575;Dbxref=NCBI_GP:HBQ7390649.1;Name=HBQ7390649.1;gbkey=CDS;gene=potG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=L8R42_002575;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=HBQ7390649.1;transl_table=11 DAFVNP010000040.1 tpg gene 32177 33130 . + . ID=gene-L8R42_002576;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=L8R42_002576 DAFVNP010000040.1 Protein Homology CDS 32177 33130 . + 0 ID=cds-HBQ7390650.1;Parent=gene-L8R42_002576;Dbxref=NCBI_GP:HBQ7390650.1;Name=HBQ7390650.1;gbkey=CDS;gene=potH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=L8R42_002576;product=putrescine ABC transporter permease PotH;protein_id=HBQ7390650.1;transl_table=11 DAFVNP010000040.1 tpg gene 33127 33972 . + . ID=gene-L8R42_002577;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=L8R42_002577 DAFVNP010000040.1 Protein Homology CDS 33127 33972 . + 0 ID=cds-HBQ7390651.1;Parent=gene-L8R42_002577;Dbxref=NCBI_GP:HBQ7390651.1;Name=HBQ7390651.1;gbkey=CDS;gene=potI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=L8R42_002577;product=putrescine ABC transporter permease PotI;protein_id=HBQ7390651.1;transl_table=11 DAFVNP010000040.1 tpg gene 34046 34519 . + . ID=gene-L8R42_002578;Name=L8R42_002578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002578 DAFVNP010000040.1 Protein Homology CDS 34046 34519 . + 0 ID=cds-HBQ7390652.1;Parent=gene-L8R42_002578;Dbxref=NCBI_GP:HBQ7390652.1;Name=HBQ7390652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=L8R42_002578;product=YbjO family protein;protein_id=HBQ7390652.1;transl_table=11 DAFVNP010000040.1 tpg gene 34562 35689 . + . ID=gene-L8R42_002579;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=L8R42_002579 DAFVNP010000040.1 Protein Homology CDS 34562 35689 . + 0 ID=cds-HBQ7390653.1;Parent=gene-L8R42_002579;Dbxref=NCBI_GP:HBQ7390653.1;Name=HBQ7390653.1;gbkey=CDS;gene=rlmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=L8R42_002579;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=HBQ7390653.1;transl_table=11 DAFVNP010000040.1 tpg gene 35984 37327 . + . ID=gene-L8R42_002580;Name=L8R42_002580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002580 DAFVNP010000040.1 Protein Homology CDS 35984 37327 . + 0 ID=cds-HBQ7390654.1;Parent=gene-L8R42_002580;Dbxref=NCBI_GP:HBQ7390654.1;Name=HBQ7390654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=L8R42_002580;product=PTS sugar transporter subunit IIC;protein_id=HBQ7390654.1;transl_table=11 DAFVNP010000040.1 tpg gene 37357 37677 . + . ID=gene-L8R42_002581;Name=L8R42_002581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002581 DAFVNP010000040.1 Protein Homology CDS 37357 37677 . + 0 ID=cds-HBQ7390655.1;Parent=gene-L8R42_002581;Dbxref=NCBI_GP:HBQ7390655.1;Name=HBQ7390655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=L8R42_002581;product=PTS sugar transporter subunit IIB;protein_id=HBQ7390655.1;transl_table=11 DAFVNP010000040.1 tpg gene 37687 39174 . + . ID=gene-L8R42_002582;Name=L8R42_002582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002582 DAFVNP010000040.1 Protein Homology CDS 37687 39174 . + 0 ID=cds-HBQ7390656.1;Parent=gene-L8R42_002582;Dbxref=NCBI_GP:HBQ7390656.1;Name=HBQ7390656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=L8R42_002582;product=sulfatase;protein_id=HBQ7390656.1;transl_table=11 DAFVNP010000040.1 tpg gene 39392 40123 . - . ID=gene-L8R42_002583;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=L8R42_002583 DAFVNP010000040.1 Protein Homology CDS 39392 40123 . - 0 ID=cds-HBQ7390657.1;Parent=gene-L8R42_002583;Dbxref=NCBI_GP:HBQ7390657.1;Name=HBQ7390657.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=L8R42_002583;product=ABC transporter substrate-binding protein ArtJ;protein_id=HBQ7390657.1;transl_table=11 ##sequence-region DAFVNP010000041.1 1 40056 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000041.1 tpg region 1 40056 . + . ID=DAFVNP010000041.1:1..40056;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000041.1 tpg gene 233 697 . - . ID=gene-L8R42_002584;Name=L8R42_002584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002584 DAFVNP010000041.1 Protein Homology CDS 233 697 . - 0 ID=cds-HBQ7390658.1;Parent=gene-L8R42_002584;Dbxref=NCBI_GP:HBQ7390658.1;Name=HBQ7390658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461996.1;locus_tag=L8R42_002584;product=YhcH/YjgK/YiaL family protein;protein_id=HBQ7390658.1;transl_table=11 DAFVNP010000041.1 tpg gene 736 1743 . - . ID=gene-L8R42_002585;Name=L8R42_002585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002585 DAFVNP010000041.1 Protein Homology CDS 736 1743 . - 0 ID=cds-HBQ7390659.1;Parent=gene-L8R42_002585;Dbxref=NCBI_GP:HBQ7390659.1;Name=HBQ7390659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=L8R42_002585;product=Ldh family oxidoreductase;protein_id=HBQ7390659.1;transl_table=11 DAFVNP010000041.1 tpg gene 1757 2773 . - . ID=gene-L8R42_002586;Name=L8R42_002586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002586 DAFVNP010000041.1 Protein Homology CDS 1757 2773 . - 0 ID=cds-HBQ7390660.1;Parent=gene-L8R42_002586;Dbxref=NCBI_GP:HBQ7390660.1;Name=HBQ7390660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=L8R42_002586;product=zinc-binding alcohol dehydrogenase family protein;protein_id=HBQ7390660.1;transl_table=11 DAFVNP010000041.1 tpg gene 2776 4248 . - . ID=gene-L8R42_002587;Name=L8R42_002587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002587 DAFVNP010000041.1 Protein Homology CDS 2776 4248 . - 0 ID=cds-HBQ7390661.1;Parent=gene-L8R42_002587;Dbxref=NCBI_GP:HBQ7390661.1;Name=HBQ7390661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=L8R42_002587;product=mannitol dehydrogenase family protein;protein_id=HBQ7390661.1;transl_table=11 DAFVNP010000041.1 tpg pseudogene 4779 5402 . + . ID=gene-L8R42_002588;Name=L8R42_002588;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002588;pseudo=true DAFVNP010000041.1 Protein Homology CDS 4779 5402 . + 0 ID=cds-L8R42_002588;Parent=gene-L8R42_002588;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727271.1;locus_tag=L8R42_002588;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000041.1 tpg gene 5481 6281 . - . ID=gene-L8R42_002589;Name=L8R42_002589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002589 DAFVNP010000041.1 Protein Homology CDS 5481 6281 . - 0 ID=cds-HBQ7390662.1;Parent=gene-L8R42_002589;Dbxref=NCBI_GP:HBQ7390662.1;Name=HBQ7390662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=L8R42_002589;product=FadR family transcriptional regulator;protein_id=HBQ7390662.1;transl_table=11 DAFVNP010000041.1 tpg gene 6435 7166 . - . ID=gene-L8R42_002590;Name=L8R42_002590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002590 DAFVNP010000041.1 Protein Homology CDS 6435 7166 . - 0 ID=cds-HBQ7390663.1;Parent=gene-L8R42_002590;Dbxref=NCBI_GP:HBQ7390663.1;Name=HBQ7390663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=L8R42_002590;product=hypothetical protein;protein_id=HBQ7390663.1;transl_table=11 DAFVNP010000041.1 tpg gene 7310 9286 . - . ID=gene-L8R42_002591;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=L8R42_002591 DAFVNP010000041.1 Protein Homology CDS 7310 9286 . - 0 ID=cds-HBQ7390664.1;Parent=gene-L8R42_002591;Dbxref=NCBI_GP:HBQ7390664.1;Name=HBQ7390664.1;gbkey=CDS;gene=speA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=L8R42_002591;product=biosynthetic arginine decarboxylase;protein_id=HBQ7390664.1;transl_table=11 DAFVNP010000041.1 tpg gene 9295 9426 . - . ID=gene-L8R42_002592;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=L8R42_002592 DAFVNP010000041.1 Protein Homology CDS 9295 9426 . - 0 ID=cds-HBQ7390665.1;Parent=gene-L8R42_002592;Dbxref=NCBI_GP:HBQ7390665.1;Name=HBQ7390665.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=L8R42_002592;product=acid stress response protein YqgB;protein_id=HBQ7390665.1;transl_table=11 DAFVNP010000041.1 tpg gene 9560 9724 . + . ID=gene-L8R42_002593;Name=L8R42_002593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002593 DAFVNP010000041.1 Protein Homology CDS 9560 9724 . + 0 ID=cds-HBQ7390666.1;Parent=gene-L8R42_002593;Dbxref=NCBI_GP:HBQ7390666.1;Name=HBQ7390666.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037550.1;locus_tag=L8R42_002593;product=hypothetical protein;protein_id=HBQ7390666.1;transl_table=11 DAFVNP010000041.1 tpg gene 10076 11230 . + . ID=gene-L8R42_002594;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=L8R42_002594 DAFVNP010000041.1 Protein Homology CDS 10076 11230 . + 0 ID=cds-HBQ7390667.1;Parent=gene-L8R42_002594;Dbxref=NCBI_GP:HBQ7390667.1;Name=HBQ7390667.1;gbkey=CDS;gene=metK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=L8R42_002594;product=methionine adenosyltransferase;protein_id=HBQ7390667.1;transl_table=11 DAFVNP010000041.1 tpg gene 11723 13117 . + . ID=gene-L8R42_002595;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=L8R42_002595 DAFVNP010000041.1 Protein Homology CDS 11723 13117 . + 0 ID=cds-HBQ7390668.1;Parent=gene-L8R42_002595;Dbxref=NCBI_GP:HBQ7390668.1;Name=HBQ7390668.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=L8R42_002595;product=galactose/proton symporter;protein_id=HBQ7390668.1;transl_table=11 DAFVNP010000041.1 tpg gene 13196 13693 . + . ID=gene-L8R42_002596;Name=L8R42_002596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002596 DAFVNP010000041.1 Protein Homology CDS 13196 13693 . + 0 ID=cds-HBQ7390669.1;Parent=gene-L8R42_002596;Dbxref=NCBI_GP:HBQ7390669.1;Name=HBQ7390669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=L8R42_002596;product=SprT family zinc-dependent metalloprotease;protein_id=HBQ7390669.1;transl_table=11 DAFVNP010000041.1 tpg gene 13788 14495 . + . ID=gene-L8R42_002597;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=L8R42_002597 DAFVNP010000041.1 Protein Homology CDS 13788 14495 . + 0 ID=cds-HBQ7390670.1;Parent=gene-L8R42_002597;Dbxref=NCBI_GP:HBQ7390670.1;Name=HBQ7390670.1;gbkey=CDS;gene=endA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=L8R42_002597;product=deoxyribonuclease I;protein_id=HBQ7390670.1;transl_table=11 DAFVNP010000041.1 tpg gene 14572 15303 . + . ID=gene-L8R42_002598;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=L8R42_002598 DAFVNP010000041.1 Protein Homology CDS 14572 15303 . + 0 ID=cds-HBQ7390671.1;Parent=gene-L8R42_002598;Dbxref=NCBI_GP:HBQ7390671.1;Name=HBQ7390671.1;gbkey=CDS;gene=rsmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226833.1;locus_tag=L8R42_002598;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=HBQ7390671.1;transl_table=11 DAFVNP010000041.1 tpg gene 15323 16270 . + . ID=gene-L8R42_002599;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=L8R42_002599 DAFVNP010000041.1 Protein Homology CDS 15323 16270 . + 0 ID=cds-HBQ7390672.1;Parent=gene-L8R42_002599;Dbxref=NCBI_GP:HBQ7390672.1;Name=HBQ7390672.1;gbkey=CDS;gene=gshB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=L8R42_002599;product=glutathione synthase;protein_id=HBQ7390672.1;transl_table=11 DAFVNP010000041.1 tpg gene 16486 17049 . + . ID=gene-L8R42_002600;Name=L8R42_002600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002600 DAFVNP010000041.1 Protein Homology CDS 16486 17049 . + 0 ID=cds-HBQ7390673.1;Parent=gene-L8R42_002600;Dbxref=NCBI_GP:HBQ7390673.1;Name=HBQ7390673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228750.1;locus_tag=L8R42_002600;product=YqgE/AlgH family protein;protein_id=HBQ7390673.1;transl_table=11 DAFVNP010000041.1 tpg gene 17049 17465 . + . ID=gene-L8R42_002601;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=L8R42_002601 DAFVNP010000041.1 Protein Homology CDS 17049 17465 . + 0 ID=cds-HBQ7390674.1;Parent=gene-L8R42_002601;Dbxref=NCBI_GP:HBQ7390674.1;Name=HBQ7390674.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=L8R42_002601;product=Holliday junction resolvase RuvX;protein_id=HBQ7390674.1;transl_table=11 DAFVNP010000041.1 tpg gene 17512 18198 . - . ID=gene-L8R42_002602;Name=L8R42_002602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002602 DAFVNP010000041.1 Protein Homology CDS 17512 18198 . - 0 ID=cds-HBQ7390675.1;Parent=gene-L8R42_002602;Dbxref=NCBI_GP:HBQ7390675.1;Name=HBQ7390675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=L8R42_002602;product=IclR family transcriptional regulator;protein_id=HBQ7390675.1;transl_table=11 DAFVNP010000041.1 tpg gene 18330 19310 . - . ID=gene-L8R42_002603;Name=L8R42_002603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002603 DAFVNP010000041.1 Protein Homology CDS 18330 19310 . - 0 ID=cds-HBQ7390676.1;Parent=gene-L8R42_002603;Dbxref=NCBI_GP:HBQ7390676.1;Name=HBQ7390676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=L8R42_002603;product=type IV pilus twitching motility protein PilT;protein_id=HBQ7390676.1;transl_table=11 DAFVNP010000041.1 tpg gene 19328 20032 . + . ID=gene-L8R42_002604;Name=L8R42_002604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002604 DAFVNP010000041.1 Protein Homology CDS 19328 20032 . + 0 ID=cds-HBQ7390677.1;Parent=gene-L8R42_002604;Dbxref=NCBI_GP:HBQ7390677.1;Name=HBQ7390677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=L8R42_002604;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=HBQ7390677.1;transl_table=11 DAFVNP010000041.1 tpg gene 20051 20617 . + . ID=gene-L8R42_002605;Name=L8R42_002605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002605 DAFVNP010000041.1 Protein Homology CDS 20051 20617 . + 0 ID=cds-HBQ7390678.1;Parent=gene-L8R42_002605;Dbxref=NCBI_GP:HBQ7390678.1;Name=HBQ7390678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=L8R42_002605;product=YggT family protein;protein_id=HBQ7390678.1;transl_table=11 DAFVNP010000041.1 tpg gene 20614 20904 . + . ID=gene-L8R42_002606;Name=L8R42_002606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002606 DAFVNP010000041.1 Protein Homology CDS 20614 20904 . + 0 ID=cds-HBQ7390679.1;Parent=gene-L8R42_002606;Dbxref=NCBI_GP:HBQ7390679.1;Name=HBQ7390679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=L8R42_002606;product=YggU family protein;protein_id=HBQ7390679.1;transl_table=11 DAFVNP010000041.1 tpg gene 20912 21505 . + . ID=gene-L8R42_002607;Name=L8R42_002607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002607 DAFVNP010000041.1 Protein Homology CDS 20912 21505 . + 0 ID=cds-HBQ7390680.1;Parent=gene-L8R42_002607;Dbxref=NCBI_GP:HBQ7390680.1;Name=HBQ7390680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=L8R42_002607;product=XTP/dITP diphosphatase;protein_id=HBQ7390680.1;transl_table=11 DAFVNP010000041.1 tpg gene 21498 22634 . + . ID=gene-L8R42_002608;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=L8R42_002608 DAFVNP010000041.1 Protein Homology CDS 21498 22634 . + 0 ID=cds-HBQ7390681.1;Parent=gene-L8R42_002608;Dbxref=NCBI_GP:HBQ7390681.1;Name=HBQ7390681.1;gbkey=CDS;gene=hemW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=L8R42_002608;product=radical SAM family heme chaperone HemW;protein_id=HBQ7390681.1;transl_table=11 DAFVNP010000041.1 tpg gene 22726 23733 . - . ID=gene-L8R42_002609;Name=L8R42_002609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002609 DAFVNP010000041.1 Protein Homology CDS 22726 23733 . - 0 ID=cds-HBQ7390682.1;Parent=gene-L8R42_002609;Dbxref=NCBI_GP:HBQ7390682.1;Name=HBQ7390682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=L8R42_002609;product=DUF1202 domain-containing protein;protein_id=HBQ7390682.1;transl_table=11 DAFVNP010000041.1 tpg gene 23866 24912 . - . ID=gene-L8R42_002610;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=L8R42_002610 DAFVNP010000041.1 Protein Homology CDS 23866 24912 . - 0 ID=cds-HBQ7390683.1;Parent=gene-L8R42_002610;Dbxref=NCBI_GP:HBQ7390683.1;Name=HBQ7390683.1;gbkey=CDS;gene=ansB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=L8R42_002610;product=L-asparaginase 2;protein_id=HBQ7390683.1;transl_table=11 DAFVNP010000041.1 tpg gene 25101 25820 . - . ID=gene-L8R42_002611;Name=L8R42_002611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002611 DAFVNP010000041.1 Protein Homology CDS 25101 25820 . - 0 ID=cds-HBQ7390684.1;Parent=gene-L8R42_002611;Dbxref=NCBI_GP:HBQ7390684.1;Name=HBQ7390684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=L8R42_002611;product=DUF2884 domain-containing protein;protein_id=HBQ7390684.1;transl_table=11 DAFVNP010000041.1 tpg gene 25870 26196 . - . ID=gene-L8R42_002612;Name=L8R42_002612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002612 DAFVNP010000041.1 Protein Homology CDS 25870 26196 . - 0 ID=cds-HBQ7390685.1;Parent=gene-L8R42_002612;Dbxref=NCBI_GP:HBQ7390685.1;Name=HBQ7390685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=L8R42_002612;product=YggL family protein;protein_id=HBQ7390685.1;transl_table=11 DAFVNP010000041.1 tpg gene 26196 26915 . - . ID=gene-L8R42_002613;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=L8R42_002613 DAFVNP010000041.1 Protein Homology CDS 26196 26915 . - 0 ID=cds-HBQ7390686.1;Parent=gene-L8R42_002613;Dbxref=NCBI_GP:HBQ7390686.1;Name=HBQ7390686.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=L8R42_002613;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=HBQ7390686.1;transl_table=11 DAFVNP010000041.1 tpg gene 27070 28122 . + . ID=gene-L8R42_002614;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=L8R42_002614 DAFVNP010000041.1 Protein Homology CDS 27070 28122 . + 0 ID=cds-HBQ7390687.1;Parent=gene-L8R42_002614;Dbxref=NCBI_GP:HBQ7390687.1;Name=HBQ7390687.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=L8R42_002614;product=A/G-specific adenine glycosylase;protein_id=HBQ7390687.1;transl_table=11 DAFVNP010000041.1 tpg gene 28150 28425 . + . ID=gene-L8R42_002615;Name=L8R42_002615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002615 DAFVNP010000041.1 Protein Homology CDS 28150 28425 . + 0 ID=cds-HBQ7390688.1;Parent=gene-L8R42_002615;Dbxref=NCBI_GP:HBQ7390688.1;Name=HBQ7390688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=L8R42_002615;product=oxidative damage protection protein;protein_id=HBQ7390688.1;transl_table=11 DAFVNP010000041.1 tpg gene 28538 29623 . + . ID=gene-L8R42_002616;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=L8R42_002616 DAFVNP010000041.1 Protein Homology CDS 28538 29623 . + 0 ID=cds-HBQ7390689.1;Parent=gene-L8R42_002616;Dbxref=NCBI_GP:HBQ7390689.1;Name=HBQ7390689.1;gbkey=CDS;gene=mltC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=L8R42_002616;product=membrane-bound lytic murein transglycosylase MltC;protein_id=HBQ7390689.1;transl_table=11 DAFVNP010000041.1 tpg gene 29840 31096 . + . ID=gene-L8R42_002617;Name=L8R42_002617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002617 DAFVNP010000041.1 Protein Homology CDS 29840 31096 . + 0 ID=cds-HBQ7390690.1;Parent=gene-L8R42_002617;Dbxref=NCBI_GP:HBQ7390690.1;Name=HBQ7390690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=L8R42_002617;product=nucleoside permease;protein_id=HBQ7390690.1;transl_table=11 DAFVNP010000041.1 tpg gene 31158 33293 . - . ID=gene-L8R42_002618;Name=L8R42_002618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002618 DAFVNP010000041.1 Protein Homology CDS 31158 33293 . - 0 ID=cds-HBQ7390691.1;Parent=gene-L8R42_002618;Dbxref=NCBI_GP:HBQ7390691.1;Name=HBQ7390691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=L8R42_002618;product=ornithine decarboxylase;protein_id=HBQ7390691.1;transl_table=11 DAFVNP010000041.1 tpg gene 33718 34425 . + . ID=gene-L8R42_002619;Name=L8R42_002619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002619 DAFVNP010000041.1 Protein Homology CDS 33718 34425 . + 0 ID=cds-HBQ7390692.1;Parent=gene-L8R42_002619;Dbxref=NCBI_GP:HBQ7390692.1;Name=HBQ7390692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=L8R42_002619;product=DUF554 domain-containing protein;protein_id=HBQ7390692.1;transl_table=11 DAFVNP010000041.1 tpg gene 34531 34606 . + . ID=gene-L8R42_002620;Name=L8R42_002620;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_002620 DAFVNP010000041.1 tRNAscan-SE tRNA 34531 34606 . + . ID=rna-L8R42_002620;Parent=gene-L8R42_002620;anticodon=(pos:34564..34566);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002620;product=tRNA-Phe DAFVNP010000041.1 tRNAscan-SE exon 34531 34606 . + . ID=exon-L8R42_002620-1;Parent=rna-L8R42_002620;anticodon=(pos:34564..34566);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002620;product=tRNA-Phe DAFVNP010000041.1 tpg pseudogene 34765 35143 . + . ID=gene-L8R42_002621;Name=L8R42_002621;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002621;pseudo=true DAFVNP010000041.1 Protein Homology CDS 34765 35143 . + 0 ID=cds-L8R42_002621;Parent=gene-L8R42_002621;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651804.1;locus_tag=L8R42_002621;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000041.1 tpg gene 35267 36172 . - . ID=gene-L8R42_002622;Name=L8R42_002622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002622 DAFVNP010000041.1 Protein Homology CDS 35267 36172 . - 0 ID=cds-HBQ7390693.1;Parent=gene-L8R42_002622;Dbxref=NCBI_GP:HBQ7390693.1;Name=HBQ7390693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441073.1;locus_tag=L8R42_002622;product=LysR family transcriptional regulator;protein_id=HBQ7390693.1;transl_table=11 DAFVNP010000041.1 tpg gene 36273 36896 . + . ID=gene-L8R42_002623;Name=L8R42_002623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002623 DAFVNP010000041.1 Protein Homology CDS 36273 36896 . + 0 ID=cds-HBQ7390694.1;Parent=gene-L8R42_002623;Dbxref=NCBI_GP:HBQ7390694.1;Name=HBQ7390694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697438.1;locus_tag=L8R42_002623;product=NAD(P)H-dependent oxidoreductase;protein_id=HBQ7390694.1;transl_table=11 DAFVNP010000041.1 tpg gene 36922 37185 . + . ID=gene-L8R42_002624;Name=L8R42_002624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002624 DAFVNP010000041.1 Protein Homology CDS 36922 37185 . + 0 ID=cds-HBQ7390695.1;Parent=gene-L8R42_002624;Dbxref=NCBI_GP:HBQ7390695.1;Name=HBQ7390695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441072.1;locus_tag=L8R42_002624;product=DUF1471 domain-containing protein;protein_id=HBQ7390695.1;transl_table=11 DAFVNP010000041.1 tpg gene 37261 38580 . + . ID=gene-L8R42_002625;Name=L8R42_002625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002625 DAFVNP010000041.1 Protein Homology CDS 37261 38580 . + 0 ID=cds-HBQ7390696.1;Parent=gene-L8R42_002625;Dbxref=NCBI_GP:HBQ7390696.1;Name=HBQ7390696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534139.1;locus_tag=L8R42_002625;product=ferric reductase-like transmembrane domain-containing protein;protein_id=HBQ7390696.1;transl_table=11 ##sequence-region DAFVNP010000042.1 1 39893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000042.1 tpg region 1 39893 . + . ID=DAFVNP010000042.1:1..39893;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000042.1 tpg gene 1 810 . + . ID=gene-L8R42_002626;Name=L8R42_002626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002626;partial=true;start_range=.,1 DAFVNP010000042.1 Protein Homology CDS 1 810 . + 0 ID=cds-HBQ7390697.1;Parent=gene-L8R42_002626;Dbxref=NCBI_GP:HBQ7390697.1;Name=HBQ7390697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=L8R42_002626;partial=true;product=AraC family transcriptional regulator;protein_id=HBQ7390697.1;start_range=.,1;transl_table=11 DAFVNP010000042.1 tpg gene 874 1533 . - . ID=gene-L8R42_002627;Name=L8R42_002627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002627 DAFVNP010000042.1 Protein Homology CDS 874 1533 . - 0 ID=cds-HBQ7390698.1;Parent=gene-L8R42_002627;Dbxref=NCBI_GP:HBQ7390698.1;Name=HBQ7390698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=L8R42_002627;product=DedA family protein;protein_id=HBQ7390698.1;transl_table=11 DAFVNP010000042.1 tpg gene 1673 2860 . - . ID=gene-L8R42_002628;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=L8R42_002628 DAFVNP010000042.1 Protein Homology CDS 1673 2860 . - 0 ID=cds-HBQ7390699.1;Parent=gene-L8R42_002628;Dbxref=NCBI_GP:HBQ7390699.1;Name=HBQ7390699.1;gbkey=CDS;gene=metC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=L8R42_002628;product=cystathionine beta-lyase;protein_id=HBQ7390699.1;transl_table=11 DAFVNP010000042.1 tpg gene 3112 3846 . + . ID=gene-L8R42_002629;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=L8R42_002629 DAFVNP010000042.1 Protein Homology CDS 3112 3846 . + 0 ID=cds-HBQ7390700.1;Parent=gene-L8R42_002629;Dbxref=NCBI_GP:HBQ7390700.1;Name=HBQ7390700.1;gbkey=CDS;gene=exbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=L8R42_002629;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=HBQ7390700.1;transl_table=11 DAFVNP010000042.1 tpg gene 3853 4278 . + . ID=gene-L8R42_002630;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=L8R42_002630 DAFVNP010000042.1 Protein Homology CDS 3853 4278 . + 0 ID=cds-HBQ7390701.1;Parent=gene-L8R42_002630;Dbxref=NCBI_GP:HBQ7390701.1;Name=HBQ7390701.1;gbkey=CDS;gene=exbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=L8R42_002630;product=TonB system transport protein ExbD;protein_id=HBQ7390701.1;transl_table=11 DAFVNP010000042.1 tpg gene 4391 5275 . - . ID=gene-L8R42_002631;Name=L8R42_002631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002631 DAFVNP010000042.1 Protein Homology CDS 4391 5275 . - 0 ID=cds-HBQ7390702.1;Parent=gene-L8R42_002631;Dbxref=NCBI_GP:HBQ7390702.1;Name=HBQ7390702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=L8R42_002631;product=SDR family oxidoreductase;protein_id=HBQ7390702.1;transl_table=11 DAFVNP010000042.1 tpg gene 5399 5803 . - . ID=gene-L8R42_002632;Name=L8R42_002632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002632 DAFVNP010000042.1 Protein Homology CDS 5399 5803 . - 0 ID=cds-HBQ7390703.1;Parent=gene-L8R42_002632;Dbxref=NCBI_GP:HBQ7390703.1;Name=HBQ7390703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=L8R42_002632;product=cytoplasmic protein;protein_id=HBQ7390703.1;transl_table=11 DAFVNP010000042.1 tpg gene 5790 6200 . - . ID=gene-L8R42_002633;Name=L8R42_002633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002633 DAFVNP010000042.1 Protein Homology CDS 5790 6200 . - 0 ID=cds-HBQ7390704.1;Parent=gene-L8R42_002633;Dbxref=NCBI_GP:HBQ7390704.1;Name=HBQ7390704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=L8R42_002633;product=hypothetical protein;protein_id=HBQ7390704.1;transl_table=11 DAFVNP010000042.1 tpg gene 6292 6807 . + . ID=gene-L8R42_002634;Name=L8R42_002634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002634 DAFVNP010000042.1 Protein Homology CDS 6292 6807 . + 0 ID=cds-HBQ7390705.1;Parent=gene-L8R42_002634;Dbxref=NCBI_GP:HBQ7390705.1;Name=HBQ7390705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462069.1;locus_tag=L8R42_002634;product=RNA helicase;protein_id=HBQ7390705.1;transl_table=11 DAFVNP010000042.1 tpg gene 7086 7580 . + . ID=gene-L8R42_002635;Name=L8R42_002635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002635 DAFVNP010000042.1 Protein Homology CDS 7086 7580 . + 0 ID=cds-HBQ7390706.1;Parent=gene-L8R42_002635;Dbxref=NCBI_GP:HBQ7390706.1;Name=HBQ7390706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=L8R42_002635;product=TIGR00645 family protein;protein_id=HBQ7390706.1;transl_table=11 DAFVNP010000042.1 tpg gene 7887 9530 . + . ID=gene-L8R42_002636;Name=L8R42_002636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002636 DAFVNP010000042.1 Protein Homology CDS 7887 9530 . + 0 ID=cds-HBQ7390707.1;Parent=gene-L8R42_002636;Dbxref=NCBI_GP:HBQ7390707.1;Name=HBQ7390707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=L8R42_002636;product=HAMP domain-containing protein;protein_id=HBQ7390707.1;transl_table=11 DAFVNP010000042.1 tpg gene 9615 9902 . + . ID=gene-L8R42_002637;Name=L8R42_002637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002637 DAFVNP010000042.1 Protein Homology CDS 9615 9902 . + 0 ID=cds-HBQ7390708.1;Parent=gene-L8R42_002637;Dbxref=NCBI_GP:HBQ7390708.1;Name=HBQ7390708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=L8R42_002637;product=DUF2623 domain-containing protein;protein_id=HBQ7390708.1;transl_table=11 DAFVNP010000042.1 tpg gene 10092 11210 . + . ID=gene-L8R42_002638;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=L8R42_002638 DAFVNP010000042.1 Protein Homology CDS 10092 11210 . + 0 ID=cds-HBQ7390709.1;Parent=gene-L8R42_002638;Dbxref=NCBI_GP:HBQ7390709.1;Name=HBQ7390709.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=L8R42_002638;product=hydrogenase 2 small subunit;protein_id=HBQ7390709.1;transl_table=11 DAFVNP010000042.1 tpg gene 11213 12199 . + . ID=gene-L8R42_002639;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=L8R42_002639 DAFVNP010000042.1 Protein Homology CDS 11213 12199 . + 0 ID=cds-HBQ7390710.1;Parent=gene-L8R42_002639;Dbxref=NCBI_GP:HBQ7390710.1;Name=HBQ7390710.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=L8R42_002639;product=hydrogenase 2 operon protein HybA;protein_id=HBQ7390710.1;transl_table=11 DAFVNP010000042.1 tpg gene 12189 13367 . + . ID=gene-L8R42_002640;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=L8R42_002640 DAFVNP010000042.1 Protein Homology CDS 12189 13367 . + 0 ID=cds-HBQ7390711.1;Parent=gene-L8R42_002640;Dbxref=NCBI_GP:HBQ7390711.1;Name=HBQ7390711.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=L8R42_002640;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=HBQ7390711.1;transl_table=11 DAFVNP010000042.1 tpg gene 13364 15067 . + . ID=gene-L8R42_002641;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=L8R42_002641 DAFVNP010000042.1 Protein Homology CDS 13364 15067 . + 0 ID=cds-HBQ7390712.1;Parent=gene-L8R42_002641;Dbxref=NCBI_GP:HBQ7390712.1;Name=HBQ7390712.1;gbkey=CDS;gene=hybC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=L8R42_002641;product=hydrogenase 2 large subunit;protein_id=HBQ7390712.1;transl_table=11 DAFVNP010000042.1 tpg gene 15067 15561 . + . ID=gene-L8R42_002642;Name=L8R42_002642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002642 DAFVNP010000042.1 Protein Homology CDS 15067 15561 . + 0 ID=cds-HBQ7390713.1;Parent=gene-L8R42_002642;Dbxref=NCBI_GP:HBQ7390713.1;Name=HBQ7390713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157468.1;locus_tag=L8R42_002642;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=HBQ7390713.1;transl_table=11 DAFVNP010000042.1 tpg gene 15554 16042 . + . ID=gene-L8R42_002643;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=L8R42_002643 DAFVNP010000042.1 Protein Homology CDS 15554 16042 . + 0 ID=cds-HBQ7390714.1;Parent=gene-L8R42_002643;Dbxref=NCBI_GP:HBQ7390714.1;Name=HBQ7390714.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=L8R42_002643;product=hydrogenase-2 assembly chaperone;protein_id=HBQ7390714.1;transl_table=11 DAFVNP010000042.1 tpg gene 16035 16376 . + . ID=gene-L8R42_002644;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=L8R42_002644 DAFVNP010000042.1 Protein Homology CDS 16035 16376 . + 0 ID=cds-HBQ7390715.1;Parent=gene-L8R42_002644;Dbxref=NCBI_GP:HBQ7390715.1;Name=HBQ7390715.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=L8R42_002644;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HBQ7390715.1;transl_table=11 DAFVNP010000042.1 tpg gene 16404 16652 . + . ID=gene-L8R42_002645;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=L8R42_002645 DAFVNP010000042.1 Protein Homology CDS 16404 16652 . + 0 ID=cds-HBQ7390716.1;Parent=gene-L8R42_002645;Dbxref=NCBI_GP:HBQ7390716.1;Name=HBQ7390716.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=L8R42_002645;product=hydrogenase maturation factor HybG;protein_id=HBQ7390716.1;transl_table=11 DAFVNP010000042.1 tpg gene 16728 17780 . + . ID=gene-L8R42_002646;Name=L8R42_002646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002646 DAFVNP010000042.1 Protein Homology CDS 16728 17780 . + 0 ID=cds-HBQ7390717.1;Parent=gene-L8R42_002646;Dbxref=NCBI_GP:HBQ7390717.1;Name=HBQ7390717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=L8R42_002646;product=ABC transporter substrate-binding protein;protein_id=HBQ7390717.1;transl_table=11 DAFVNP010000042.1 tpg gene 17780 18490 . + . ID=gene-L8R42_002647;Name=L8R42_002647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002647 DAFVNP010000042.1 Protein Homology CDS 17780 18490 . + 0 ID=cds-HBQ7390718.1;Parent=gene-L8R42_002647;Dbxref=NCBI_GP:HBQ7390718.1;Name=HBQ7390718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=L8R42_002647;product=molybdate ABC transporter substrate-binding protein;protein_id=HBQ7390718.1;transl_table=11 DAFVNP010000042.1 tpg gene 18558 19424 . - . ID=gene-L8R42_002648;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=L8R42_002648 DAFVNP010000042.1 Protein Homology CDS 18558 19424 . - 0 ID=cds-HBQ7390719.1;Parent=gene-L8R42_002648;Dbxref=NCBI_GP:HBQ7390719.1;Name=HBQ7390719.1;gbkey=CDS;gene=yghU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=L8R42_002648;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=HBQ7390719.1;transl_table=11 DAFVNP010000042.1 tpg gene 19651 21507 . + . ID=gene-L8R42_002649;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=L8R42_002649 DAFVNP010000042.1 Protein Homology CDS 19651 21507 . + 0 ID=cds-HBQ7390720.1;Parent=gene-L8R42_002649;Dbxref=NCBI_GP:HBQ7390720.1;Name=HBQ7390720.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=L8R42_002649;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=HBQ7390720.1;transl_table=11 DAFVNP010000042.1 tpg gene 22177 23235 . + . ID=gene-L8R42_002650;Name=L8R42_002650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002650 DAFVNP010000042.1 Protein Homology CDS 22177 23235 . + 0 ID=cds-HBQ7390721.1;Parent=gene-L8R42_002650;Dbxref=NCBI_GP:HBQ7390721.1;Name=HBQ7390721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=L8R42_002650;product=CZB domain-containing protein;protein_id=HBQ7390721.1;transl_table=11 DAFVNP010000042.1 tpg gene 23535 24947 . - . ID=gene-L8R42_002651;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=L8R42_002651 DAFVNP010000042.1 Protein Homology CDS 23535 24947 . - 0 ID=cds-HBQ7390722.1;Parent=gene-L8R42_002651;Dbxref=NCBI_GP:HBQ7390722.1;Name=HBQ7390722.1;gbkey=CDS;gene=uxaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=L8R42_002651;product=glucuronate isomerase;protein_id=HBQ7390722.1;transl_table=11 DAFVNP010000042.1 tpg gene 24959 26431 . - . ID=gene-L8R42_002652;Name=L8R42_002652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002652 DAFVNP010000042.1 Protein Homology CDS 24959 26431 . - 0 ID=cds-HBQ7390723.1;Parent=gene-L8R42_002652;Dbxref=NCBI_GP:HBQ7390723.1;Name=HBQ7390723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=L8R42_002652;product=fructuronate reductase;protein_id=HBQ7390723.1;transl_table=11 DAFVNP010000042.1 tpg gene 26542 27726 . - . ID=gene-L8R42_002653;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=L8R42_002653 DAFVNP010000042.1 Protein Homology CDS 26542 27726 . - 0 ID=cds-HBQ7390724.1;Parent=gene-L8R42_002653;Dbxref=NCBI_GP:HBQ7390724.1;Name=HBQ7390724.1;gbkey=CDS;gene=uxuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=L8R42_002653;product=mannonate dehydratase;protein_id=HBQ7390724.1;transl_table=11 DAFVNP010000042.1 tpg gene 28130 29434 . + . ID=gene-L8R42_002654;Name=L8R42_002654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002654 DAFVNP010000042.1 Protein Homology CDS 28130 29434 . + 0 ID=cds-HBQ7390725.1;Parent=gene-L8R42_002654;Dbxref=NCBI_GP:HBQ7390725.1;Name=HBQ7390725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=L8R42_002654;product=MFS transporter;protein_id=HBQ7390725.1;transl_table=11 DAFVNP010000042.1 tpg gene 29830 30708 . + . ID=gene-L8R42_002655;Name=L8R42_002655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002655 DAFVNP010000042.1 Protein Homology CDS 29830 30708 . + 0 ID=cds-HBQ7390726.1;Parent=gene-L8R42_002655;Dbxref=NCBI_GP:HBQ7390726.1;Name=HBQ7390726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=L8R42_002655;product=carbon-nitrogen hydrolase family protein;protein_id=HBQ7390726.1;transl_table=11 DAFVNP010000042.1 tpg gene 30747 31670 . + . ID=gene-L8R42_002656;Name=L8R42_002656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002656 DAFVNP010000042.1 Protein Homology CDS 30747 31670 . + 0 ID=cds-HBQ7390727.1;Parent=gene-L8R42_002656;Dbxref=NCBI_GP:HBQ7390727.1;Name=HBQ7390727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=L8R42_002656;product=polysaccharide deacetylase;protein_id=HBQ7390727.1;transl_table=11 DAFVNP010000042.1 tpg gene 32395 32880 . + . ID=gene-L8R42_002657;Name=L8R42_002657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002657 DAFVNP010000042.1 Protein Homology CDS 32395 32880 . + 0 ID=cds-HBQ7390728.1;Parent=gene-L8R42_002657;Dbxref=NCBI_GP:HBQ7390728.1;Name=HBQ7390728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=L8R42_002657;product=type VI secretion system tube protein Hcp;protein_id=HBQ7390728.1;transl_table=11 DAFVNP010000042.1 tpg gene 32880 33260 . + . ID=gene-L8R42_002658;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=L8R42_002658 DAFVNP010000042.1 Protein Homology CDS 32880 33260 . + 0 ID=cds-HBQ7390729.1;Parent=gene-L8R42_002658;Dbxref=NCBI_GP:HBQ7390729.1;Name=HBQ7390729.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=L8R42_002658;product=anti-adapter protein IraD;protein_id=HBQ7390729.1;transl_table=11 DAFVNP010000042.1 tpg gene 33396 34880 . - . ID=gene-L8R42_002659;Name=L8R42_002659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002659 DAFVNP010000042.1 Protein Homology CDS 33396 34880 . - 0 ID=cds-HBQ7390730.1;Parent=gene-L8R42_002659;Dbxref=NCBI_GP:HBQ7390730.1;Name=HBQ7390730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=L8R42_002659;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=HBQ7390730.1;transl_table=11 DAFVNP010000042.1 tpg gene 35042 36343 . + . ID=gene-L8R42_002660;Name=L8R42_002660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002660 DAFVNP010000042.1 Protein Homology CDS 35042 36343 . + 0 ID=cds-HBQ7390731.1;Parent=gene-L8R42_002660;Dbxref=NCBI_GP:HBQ7390731.1;Name=HBQ7390731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=L8R42_002660;product=FAD-binding oxidoreductase;protein_id=HBQ7390731.1;transl_table=11 DAFVNP010000042.1 tpg gene 36358 36732 . + . ID=gene-L8R42_002661;Name=L8R42_002661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002661 DAFVNP010000042.1 Protein Homology CDS 36358 36732 . + 0 ID=cds-HBQ7390732.1;Parent=gene-L8R42_002661;Dbxref=NCBI_GP:HBQ7390732.1;Name=HBQ7390732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=L8R42_002661;product=cupin domain-containing protein;protein_id=HBQ7390732.1;transl_table=11 DAFVNP010000042.1 tpg gene 36941 38440 . + . ID=gene-L8R42_002662;Name=L8R42_002662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002662 DAFVNP010000042.1 Protein Homology CDS 36941 38440 . + 0 ID=cds-HBQ7390733.1;Parent=gene-L8R42_002662;Dbxref=NCBI_GP:HBQ7390733.1;Name=HBQ7390733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=L8R42_002662;product=APC family permease;protein_id=HBQ7390733.1;transl_table=11 DAFVNP010000042.1 tpg gene 38418 38975 . + . ID=gene-L8R42_002663;Name=L8R42_002663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002663 DAFVNP010000042.1 Protein Homology CDS 38418 38975 . + 0 ID=cds-HBQ7390734.1;Parent=gene-L8R42_002663;Dbxref=NCBI_GP:HBQ7390734.1;Name=HBQ7390734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=L8R42_002663;product=DUF3156 family protein;protein_id=HBQ7390734.1;transl_table=11 DAFVNP010000042.1 tpg gene 39080 39763 . - . ID=gene-L8R42_002664;Name=L8R42_002664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002664 DAFVNP010000042.1 Protein Homology CDS 39080 39763 . - 0 ID=cds-HBQ7390735.1;Parent=gene-L8R42_002664;Dbxref=NCBI_GP:HBQ7390735.1;Name=HBQ7390735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=L8R42_002664;product=LuxR family transcriptional regulator;protein_id=HBQ7390735.1;transl_table=11 ##sequence-region DAFVNP010000043.1 1 39635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000043.1 tpg region 1 39635 . + . ID=DAFVNP010000043.1:1..39635;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000043.1 tpg gene 123 2879 . + . ID=gene-L8R42_002665;Name=L8R42_002665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002665 DAFVNP010000043.1 Protein Homology CDS 123 2879 . + 0 ID=cds-HBQ7390736.1;Parent=gene-L8R42_002665;Dbxref=NCBI_GP:HBQ7390736.1;Name=HBQ7390736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020231445.1;locus_tag=L8R42_002665;product=DUF927 domain-containing protein;protein_id=HBQ7390736.1;transl_table=11 DAFVNP010000043.1 tpg gene 3463 3624 . + . ID=gene-L8R42_002666;Name=L8R42_002666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002666 DAFVNP010000043.1 Protein Homology CDS 3463 3624 . + 0 ID=cds-HBQ7390737.1;Parent=gene-L8R42_002666;Dbxref=NCBI_GP:HBQ7390737.1;Name=HBQ7390737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018527.1;locus_tag=L8R42_002666;product=hypothetical protein;protein_id=HBQ7390737.1;transl_table=11 DAFVNP010000043.1 tpg gene 3641 4102 . + . ID=gene-L8R42_002667;Name=L8R42_002667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002667 DAFVNP010000043.1 Protein Homology CDS 3641 4102 . + 0 ID=cds-HBQ7390738.1;Parent=gene-L8R42_002667;Dbxref=NCBI_GP:HBQ7390738.1;Name=HBQ7390738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420672.1;locus_tag=L8R42_002667;product=DUF2824 family protein;protein_id=HBQ7390738.1;transl_table=11 DAFVNP010000043.1 tpg gene 4096 4773 . + . ID=gene-L8R42_002668;Name=L8R42_002668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002668 DAFVNP010000043.1 Protein Homology CDS 4096 4773 . + 0 ID=cds-HBQ7390739.1;Parent=gene-L8R42_002668;Dbxref=NCBI_GP:HBQ7390739.1;Name=HBQ7390739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001590889.1;locus_tag=L8R42_002668;product=DNA transfer protein;protein_id=HBQ7390739.1;transl_table=11 DAFVNP010000043.1 tpg gene 4773 6194 . + . ID=gene-L8R42_002669;Name=L8R42_002669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002669 DAFVNP010000043.1 Protein Homology CDS 4773 6194 . + 0 ID=cds-HBQ7390740.1;Parent=gene-L8R42_002669;Dbxref=NCBI_GP:HBQ7390740.1;Name=HBQ7390740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246954.1;locus_tag=L8R42_002669;product=phage DNA ejection protein;protein_id=HBQ7390740.1;transl_table=11 DAFVNP010000043.1 tpg gene 6194 8299 . + . ID=gene-L8R42_002670;Name=L8R42_002670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002670 DAFVNP010000043.1 Protein Homology CDS 6194 8299 . + 0 ID=cds-HBQ7390741.1;Parent=gene-L8R42_002670;Dbxref=NCBI_GP:HBQ7390741.1;Name=HBQ7390741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001570980.1;locus_tag=L8R42_002670;product=injection protein;protein_id=HBQ7390741.1;transl_table=11 DAFVNP010000043.1 tpg gene 8318 8707 . - . ID=gene-L8R42_002671;Name=L8R42_002671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002671 DAFVNP010000043.1 Protein Homology CDS 8318 8707 . - 0 ID=cds-HBQ7390742.1;Parent=gene-L8R42_002671;Dbxref=NCBI_GP:HBQ7390742.1;Name=HBQ7390742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560496.1;locus_tag=L8R42_002671;product=hypothetical protein;protein_id=HBQ7390742.1;transl_table=11 DAFVNP010000043.1 tpg gene 9620 10102 . + . ID=gene-L8R42_002672;Name=L8R42_002672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002672 DAFVNP010000043.1 Protein Homology CDS 9620 10102 . + 0 ID=cds-HBQ7390743.1;Parent=gene-L8R42_002672;Dbxref=NCBI_GP:HBQ7390743.1;Name=HBQ7390743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072645.1;locus_tag=L8R42_002672;product=ImmA/IrrE family metallo-endopeptidase;protein_id=HBQ7390743.1;transl_table=11 DAFVNP010000043.1 tpg gene 10106 10483 . + . ID=gene-L8R42_002673;Name=L8R42_002673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002673 DAFVNP010000043.1 Protein Homology CDS 10106 10483 . + 0 ID=cds-HBQ7390744.1;Parent=gene-L8R42_002673;Dbxref=NCBI_GP:HBQ7390744.1;Name=HBQ7390744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204055.1;locus_tag=L8R42_002673;product=hypothetical protein;protein_id=HBQ7390744.1;transl_table=11 DAFVNP010000043.1 tpg gene 10500 10943 . - . ID=gene-L8R42_002674;Name=L8R42_002674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002674 DAFVNP010000043.1 Protein Homology CDS 10500 10943 . - 0 ID=cds-HBQ7390745.1;Parent=gene-L8R42_002674;Dbxref=NCBI_GP:HBQ7390745.1;Name=HBQ7390745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230710.1;locus_tag=L8R42_002674;product=hypothetical protein;protein_id=HBQ7390745.1;transl_table=11 DAFVNP010000043.1 tpg gene 11203 11490 . + . ID=gene-L8R42_002675;Name=L8R42_002675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002675 DAFVNP010000043.1 Protein Homology CDS 11203 11490 . + 0 ID=cds-HBQ7390746.1;Parent=gene-L8R42_002675;Dbxref=NCBI_GP:HBQ7390746.1;Name=HBQ7390746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617441.1;locus_tag=L8R42_002675;product=PerC family transcriptional regulator;protein_id=HBQ7390746.1;transl_table=11 DAFVNP010000043.1 tpg gene 12068 12970 . - . ID=gene-L8R42_002676;Name=L8R42_002676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002676 DAFVNP010000043.1 Protein Homology CDS 12068 12970 . - 0 ID=cds-HBQ7390747.1;Parent=gene-L8R42_002676;Dbxref=NCBI_GP:HBQ7390747.1;Name=HBQ7390747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=L8R42_002676;product=LysR family transcriptional regulator;protein_id=HBQ7390747.1;transl_table=11 DAFVNP010000043.1 tpg gene 13044 13925 . + . ID=gene-L8R42_002677;Name=L8R42_002677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002677 DAFVNP010000043.1 Protein Homology CDS 13044 13925 . + 0 ID=cds-HBQ7390748.1;Parent=gene-L8R42_002677;Dbxref=NCBI_GP:HBQ7390748.1;Name=HBQ7390748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=L8R42_002677;product=HARLDQ motif MBL-fold protein;protein_id=HBQ7390748.1;transl_table=11 DAFVNP010000043.1 tpg gene 14176 14793 . + . ID=gene-L8R42_002678;Name=L8R42_002678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002678 DAFVNP010000043.1 Protein Homology CDS 14176 14793 . + 0 ID=cds-HBQ7390749.1;Parent=gene-L8R42_002678;Dbxref=NCBI_GP:HBQ7390749.1;Name=HBQ7390749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=L8R42_002678;product=trimeric intracellular cation channel family protein;protein_id=HBQ7390749.1;transl_table=11 DAFVNP010000043.1 tpg gene 14790 16475 . - . ID=gene-L8R42_002679;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=L8R42_002679 DAFVNP010000043.1 Protein Homology CDS 14790 16475 . - 0 ID=cds-HBQ7390750.1;Parent=gene-L8R42_002679;Dbxref=NCBI_GP:HBQ7390750.1;Name=HBQ7390750.1;gbkey=CDS;gene=ligB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=L8R42_002679;product=NAD-dependent DNA ligase LigB;protein_id=HBQ7390750.1;transl_table=11 DAFVNP010000043.1 tpg gene 16732 17355 . + . ID=gene-L8R42_002680;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=L8R42_002680 DAFVNP010000043.1 Protein Homology CDS 16732 17355 . + 0 ID=cds-HBQ7390751.1;Parent=gene-L8R42_002680;Dbxref=NCBI_GP:HBQ7390751.1;Name=HBQ7390751.1;gbkey=CDS;gene=gmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=L8R42_002680;product=guanylate kinase;protein_id=HBQ7390751.1;transl_table=11 DAFVNP010000043.1 tpg gene 17410 17685 . + . ID=gene-L8R42_002681;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=L8R42_002681 DAFVNP010000043.1 Protein Homology CDS 17410 17685 . + 0 ID=cds-HBQ7390752.1;Parent=gene-L8R42_002681;Dbxref=NCBI_GP:HBQ7390752.1;Name=HBQ7390752.1;gbkey=CDS;gene=rpoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=L8R42_002681;product=DNA-directed RNA polymerase subunit omega;protein_id=HBQ7390752.1;transl_table=11 DAFVNP010000043.1 tpg gene 17704 19815 . + . ID=gene-L8R42_002682;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=L8R42_002682 DAFVNP010000043.1 Protein Homology CDS 17704 19815 . + 0 ID=cds-HBQ7390753.1;Parent=gene-L8R42_002682;Dbxref=NCBI_GP:HBQ7390753.1;Name=HBQ7390753.1;gbkey=CDS;gene=spoT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=L8R42_002682;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=HBQ7390753.1;transl_table=11 DAFVNP010000043.1 tpg gene 19820 20509 . + . ID=gene-L8R42_002683;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=L8R42_002683 DAFVNP010000043.1 Protein Homology CDS 19820 20509 . + 0 ID=cds-HBQ7390754.1;Parent=gene-L8R42_002683;Dbxref=NCBI_GP:HBQ7390754.1;Name=HBQ7390754.1;gbkey=CDS;gene=trmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=L8R42_002683;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=HBQ7390754.1;transl_table=11 DAFVNP010000043.1 tpg gene 20515 22596 . + . ID=gene-L8R42_002684;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=L8R42_002684 DAFVNP010000043.1 Protein Homology CDS 20515 22596 . + 0 ID=cds-HBQ7390755.1;Parent=gene-L8R42_002684;Dbxref=NCBI_GP:HBQ7390755.1;Name=HBQ7390755.1;gbkey=CDS;gene=recG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=L8R42_002684;product=ATP-dependent DNA helicase RecG;protein_id=HBQ7390755.1;transl_table=11 DAFVNP010000043.1 tpg gene 22632 23837 . - . ID=gene-L8R42_002685;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=L8R42_002685 DAFVNP010000043.1 Protein Homology CDS 22632 23837 . - 0 ID=cds-HBQ7390756.1;Parent=gene-L8R42_002685;Dbxref=NCBI_GP:HBQ7390756.1;Name=HBQ7390756.1;gbkey=CDS;gene=gltS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=L8R42_002685;product=sodium/glutamate symporter;protein_id=HBQ7390756.1;transl_table=11 DAFVNP010000043.1 tpg gene 24065 25456 . + . ID=gene-L8R42_002686;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=L8R42_002686 DAFVNP010000043.1 Protein Homology CDS 24065 25456 . + 0 ID=cds-HBQ7390757.1;Parent=gene-L8R42_002686;Dbxref=NCBI_GP:HBQ7390757.1;Name=HBQ7390757.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=L8R42_002686;product=xanthine/proton symporter XanP;protein_id=HBQ7390757.1;transl_table=11 DAFVNP010000043.1 tpg gene 25577 27286 . + . ID=gene-L8R42_002687;Name=L8R42_002687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002687 DAFVNP010000043.1 Protein Homology CDS 25577 27286 . + 0 ID=cds-HBQ7390758.1;Parent=gene-L8R42_002687;Dbxref=NCBI_GP:HBQ7390758.1;Name=HBQ7390758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=L8R42_002687;product=AsmA family protein;protein_id=HBQ7390758.1;transl_table=11 DAFVNP010000043.1 tpg gene 27389 29707 . - . ID=gene-L8R42_002688;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=L8R42_002688 DAFVNP010000043.1 Protein Homology CDS 27389 29707 . - 0 ID=cds-HBQ7390759.1;Parent=gene-L8R42_002688;Dbxref=NCBI_GP:HBQ7390759.1;Name=HBQ7390759.1;gbkey=CDS;gene=yicI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=L8R42_002688;product=alpha-xylosidase;protein_id=HBQ7390759.1;transl_table=11 DAFVNP010000043.1 tpg gene 29719 31101 . - . ID=gene-L8R42_002689;Name=L8R42_002689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002689 DAFVNP010000043.1 Protein Homology CDS 29719 31101 . - 0 ID=cds-HBQ7390760.1;Parent=gene-L8R42_002689;Dbxref=NCBI_GP:HBQ7390760.1;Name=HBQ7390760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=L8R42_002689;product=glycoside-pentoside-hexuronide family transporter;protein_id=HBQ7390760.1;transl_table=11 DAFVNP010000043.1 tpg gene 31389 31483 . + . ID=gene-L8R42_002690;Name=L8R42_002690;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_002690 DAFVNP010000043.1 tRNAscan-SE tRNA 31389 31483 . + . ID=rna-L8R42_002690;Parent=gene-L8R42_002690;anticodon=(pos:31423..31425);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002690;product=tRNA-Sec DAFVNP010000043.1 tRNAscan-SE exon 31389 31483 . + . ID=exon-L8R42_002690-1;Parent=rna-L8R42_002690;anticodon=(pos:31423..31425);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002690;product=tRNA-Sec DAFVNP010000043.1 tpg pseudogene 31519 31858 . - . ID=gene-L8R42_002691;Name=L8R42_002691;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002691;pseudo=true DAFVNP010000043.1 Protein Homology CDS 31519 31858 . - 0 ID=cds-L8R42_002691;Parent=gene-L8R42_002691;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558297.1;locus_tag=L8R42_002691;product=transposase;pseudo=true;transl_table=11 DAFVNP010000043.1 tpg pseudogene 32268 32378 . + . ID=gene-L8R42_002692;Name=L8R42_002692;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002692;pseudo=true DAFVNP010000043.1 Protein Homology CDS 32268 32378 . + 0 ID=cds-L8R42_002692;Parent=gene-L8R42_002692;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=L8R42_002692;product=IS3 family transposase;pseudo=true;transl_table=11 DAFVNP010000043.1 tpg gene 33135 33752 . + . ID=gene-L8R42_002693;Name=L8R42_002693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002693 DAFVNP010000043.1 Protein Homology CDS 33135 33752 . + 0 ID=cds-HBQ7390761.1;Parent=gene-L8R42_002693;Dbxref=NCBI_GP:HBQ7390761.1;Name=HBQ7390761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=L8R42_002693;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7390761.1;transl_table=11 DAFVNP010000043.1 tpg gene 33827 36679 . + . ID=gene-L8R42_002694;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=L8R42_002694 DAFVNP010000043.1 Protein Homology CDS 33827 36679 . + 0 ID=cds-HBQ7390762.1;Parent=gene-L8R42_002694;Dbxref=NCBI_GP:HBQ7390762.1;Name=HBQ7390762.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=L8R42_002694;product=intestinal colonization autotransporter adhesin MisL;protein_id=HBQ7390762.1;transl_table=11 DAFVNP010000043.1 tpg gene 36774 37238 . - . ID=gene-L8R42_002695;Name=L8R42_002695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002695 DAFVNP010000043.1 Protein Homology CDS 36774 37238 . - 0 ID=cds-HBQ7390763.1;Parent=gene-L8R42_002695;Dbxref=NCBI_GP:HBQ7390763.1;Name=HBQ7390763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=L8R42_002695;product=hypothetical protein;protein_id=HBQ7390763.1;transl_table=11 DAFVNP010000043.1 tpg gene 37249 38106 . - . ID=gene-L8R42_002696;Name=L8R42_002696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002696 DAFVNP010000043.1 Protein Homology CDS 37249 38106 . - 0 ID=cds-HBQ7390764.1;Parent=gene-L8R42_002696;Dbxref=NCBI_GP:HBQ7390764.1;Name=HBQ7390764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=L8R42_002696;product=transcriptional regulator;protein_id=HBQ7390764.1;transl_table=11 DAFVNP010000043.1 tpg gene 38159 38272 . - . ID=gene-L8R42_002697;Name=L8R42_002697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002697 DAFVNP010000043.1 Protein Homology CDS 38159 38272 . - 0 ID=cds-HBQ7390765.1;Parent=gene-L8R42_002697;Dbxref=NCBI_GP:HBQ7390765.1;Name=HBQ7390765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453069.1;locus_tag=L8R42_002697;product=hypothetical protein;protein_id=HBQ7390765.1;transl_table=11 DAFVNP010000043.1 tpg gene 38890 39570 . + . ID=gene-L8R42_002698;Name=L8R42_002698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002698 DAFVNP010000043.1 Protein Homology CDS 38890 39570 . + 0 ID=cds-HBQ7390766.1;Parent=gene-L8R42_002698;Dbxref=NCBI_GP:HBQ7390766.1;Name=HBQ7390766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=L8R42_002698;product=isochorismatase family protein;protein_id=HBQ7390766.1;transl_table=11 ##sequence-region DAFVNP010000044.1 1 38322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000044.1 tpg region 1 38322 . + . ID=DAFVNP010000044.1:1..38322;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000044.1 tpg gene 251 1333 . + . ID=gene-L8R42_002699;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=L8R42_002699 DAFVNP010000044.1 Protein Homology CDS 251 1333 . + 0 ID=cds-HBQ7390767.1;Parent=gene-L8R42_002699;Dbxref=NCBI_GP:HBQ7390767.1;Name=HBQ7390767.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=L8R42_002699;product=porin OmpD;protein_id=HBQ7390767.1;transl_table=11 DAFVNP010000044.1 tpg gene 1477 1857 . + . ID=gene-L8R42_002700;Name=L8R42_002700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002700 DAFVNP010000044.1 Protein Homology CDS 1477 1857 . + 0 ID=cds-HBQ7390768.1;Parent=gene-L8R42_002700;Dbxref=NCBI_GP:HBQ7390768.1;Name=HBQ7390768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=L8R42_002700;product=GFA family protein;protein_id=HBQ7390768.1;transl_table=11 DAFVNP010000044.1 tpg gene 1882 3369 . - . ID=gene-L8R42_002701;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=L8R42_002701 DAFVNP010000044.1 Protein Homology CDS 1882 3369 . - 0 ID=cds-HBQ7390769.1;Parent=gene-L8R42_002701;Dbxref=NCBI_GP:HBQ7390769.1;Name=HBQ7390769.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=L8R42_002701;product=methyl viologen efflux MFS transporter SmvA;protein_id=HBQ7390769.1;transl_table=11 DAFVNP010000044.1 tpg gene 3487 4065 . + . ID=gene-L8R42_002702;Name=L8R42_002702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002702 DAFVNP010000044.1 Protein Homology CDS 3487 4065 . + 0 ID=cds-HBQ7390770.1;Parent=gene-L8R42_002702;Dbxref=NCBI_GP:HBQ7390770.1;Name=HBQ7390770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=L8R42_002702;product=TetR family transcriptional regulator;protein_id=HBQ7390770.1;transl_table=11 DAFVNP010000044.1 tpg gene 4280 5668 . + . ID=gene-L8R42_002703;Name=L8R42_002703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002703 DAFVNP010000044.1 Protein Homology CDS 4280 5668 . + 0 ID=cds-HBQ7390771.1;Parent=gene-L8R42_002703;Dbxref=NCBI_GP:HBQ7390771.1;Name=HBQ7390771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=L8R42_002703;product=NarK family nitrate/nitrite MFS transporter;protein_id=HBQ7390771.1;transl_table=11 DAFVNP010000044.1 tpg gene 5760 9500 . + . ID=gene-L8R42_002704;Name=L8R42_002704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002704 DAFVNP010000044.1 Protein Homology CDS 5760 9500 . + 0 ID=cds-HBQ7390772.1;Parent=gene-L8R42_002704;Dbxref=NCBI_GP:HBQ7390772.1;Name=HBQ7390772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=L8R42_002704;product=nitrate reductase subunit alpha;protein_id=HBQ7390772.1;transl_table=11 DAFVNP010000044.1 tpg gene 9497 11041 . + . ID=gene-L8R42_002705;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=L8R42_002705 DAFVNP010000044.1 Protein Homology CDS 9497 11041 . + 0 ID=cds-HBQ7390773.1;Parent=gene-L8R42_002705;Dbxref=NCBI_GP:HBQ7390773.1;Name=HBQ7390773.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=L8R42_002705;product=nitrate reductase subunit beta;protein_id=HBQ7390773.1;transl_table=11 DAFVNP010000044.1 tpg gene 11041 11736 . + . ID=gene-L8R42_002706;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=L8R42_002706 DAFVNP010000044.1 Protein Homology CDS 11041 11736 . + 0 ID=cds-HBQ7390774.1;Parent=gene-L8R42_002706;Dbxref=NCBI_GP:HBQ7390774.1;Name=HBQ7390774.1;gbkey=CDS;gene=narW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=L8R42_002706;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=HBQ7390774.1;transl_table=11 DAFVNP010000044.1 tpg gene 11733 12413 . + . ID=gene-L8R42_002707;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=L8R42_002707 DAFVNP010000044.1 Protein Homology CDS 11733 12413 . + 0 ID=cds-HBQ7390775.1;Parent=gene-L8R42_002707;Dbxref=NCBI_GP:HBQ7390775.1;Name=HBQ7390775.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=L8R42_002707;product=respiratory nitrate reductase subunit gamma;protein_id=HBQ7390775.1;transl_table=11 DAFVNP010000044.1 tpg gene 12520 13413 . + . ID=gene-L8R42_002708;Name=L8R42_002708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002708 DAFVNP010000044.1 Protein Homology CDS 12520 13413 . + 0 ID=cds-HBQ7390776.1;Parent=gene-L8R42_002708;Dbxref=NCBI_GP:HBQ7390776.1;Name=HBQ7390776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=L8R42_002708;product=PhzF family isomerase;protein_id=HBQ7390776.1;transl_table=11 DAFVNP010000044.1 tpg gene 13449 14294 . - . ID=gene-L8R42_002709;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=L8R42_002709 DAFVNP010000044.1 Protein Homology CDS 13449 14294 . - 0 ID=cds-HBQ7390777.1;Parent=gene-L8R42_002709;Dbxref=NCBI_GP:HBQ7390777.1;Name=HBQ7390777.1;gbkey=CDS;gene=nhoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=L8R42_002709;product=N-hydroxyarylamine O-acetyltransferase;protein_id=HBQ7390777.1;transl_table=11 DAFVNP010000044.1 tpg gene 14579 15211 . - . ID=gene-L8R42_002710;Name=L8R42_002710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002710 DAFVNP010000044.1 Protein Homology CDS 14579 15211 . - 0 ID=cds-HBQ7390778.1;Parent=gene-L8R42_002710;Dbxref=NCBI_GP:HBQ7390778.1;Name=HBQ7390778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=L8R42_002710;product=effector protein steA;protein_id=HBQ7390778.1;transl_table=11 DAFVNP010000044.1 tpg gene 15724 17217 . + . ID=gene-L8R42_002711;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=L8R42_002711 DAFVNP010000044.1 Protein Homology CDS 15724 17217 . + 0 ID=cds-HBQ7390779.1;Parent=gene-L8R42_002711;Dbxref=NCBI_GP:HBQ7390779.1;Name=HBQ7390779.1;gbkey=CDS;gene=ansP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=L8R42_002711;product=L-asparagine permease;protein_id=HBQ7390779.1;transl_table=11 DAFVNP010000044.1 tpg gene 17294 17515 . - . ID=gene-L8R42_002712;Name=L8R42_002712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002712 DAFVNP010000044.1 Protein Homology CDS 17294 17515 . - 0 ID=cds-HBQ7390780.1;Parent=gene-L8R42_002712;Dbxref=NCBI_GP:HBQ7390780.1;Name=HBQ7390780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=L8R42_002712;product=YgdI/YgdR family lipoprotein;protein_id=HBQ7390780.1;transl_table=11 DAFVNP010000044.1 tpg gene 17660 18721 . - . ID=gene-L8R42_002713;Name=L8R42_002713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002713 DAFVNP010000044.1 Protein Homology CDS 17660 18721 . - 0 ID=cds-HBQ7390781.1;Parent=gene-L8R42_002713;Dbxref=NCBI_GP:HBQ7390781.1;Name=HBQ7390781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=L8R42_002713;product=YncE family protein;protein_id=HBQ7390781.1;transl_table=11 DAFVNP010000044.1 tpg gene 18985 21105 . + . ID=gene-L8R42_002714;Name=L8R42_002714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002714 DAFVNP010000044.1 Protein Homology CDS 18985 21105 . + 0 ID=cds-HBQ7390782.1;Parent=gene-L8R42_002714;Dbxref=NCBI_GP:HBQ7390782.1;Name=HBQ7390782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=L8R42_002714;product=TonB-dependent receptor;protein_id=HBQ7390782.1;transl_table=11 DAFVNP010000044.1 tpg gene 21161 21826 . - . ID=gene-L8R42_002715;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=L8R42_002715 DAFVNP010000044.1 Protein Homology CDS 21161 21826 . - 0 ID=cds-HBQ7390783.1;Parent=gene-L8R42_002715;Dbxref=NCBI_GP:HBQ7390783.1;Name=HBQ7390783.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=L8R42_002715;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=HBQ7390783.1;transl_table=11 DAFVNP010000044.1 tpg gene 22160 23197 . - . ID=gene-L8R42_002716;Name=L8R42_002716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002716 DAFVNP010000044.1 Protein Homology CDS 22160 23197 . - 0 ID=cds-HBQ7390784.1;Parent=gene-L8R42_002716;Dbxref=NCBI_GP:HBQ7390784.1;Name=HBQ7390784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=L8R42_002716;product=NADP-dependent oxidoreductase;protein_id=HBQ7390784.1;transl_table=11 DAFVNP010000044.1 tpg gene 23409 23924 . + . ID=gene-L8R42_002717;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=L8R42_002717 DAFVNP010000044.1 Protein Homology CDS 23409 23924 . + 0 ID=cds-HBQ7390785.1;Parent=gene-L8R42_002717;Dbxref=NCBI_GP:HBQ7390785.1;Name=HBQ7390785.1;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=L8R42_002717;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=HBQ7390785.1;transl_table=11 DAFVNP010000044.1 tpg gene 23924 24373 . + . ID=gene-L8R42_002718;Name=L8R42_002718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002718 DAFVNP010000044.1 Protein Homology CDS 23924 24373 . + 0 ID=cds-HBQ7390786.1;Parent=gene-L8R42_002718;Dbxref=NCBI_GP:HBQ7390786.1;Name=HBQ7390786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=L8R42_002718;product=DMT family transporter;protein_id=HBQ7390786.1;transl_table=11 DAFVNP010000044.1 tpg gene 24378 24611 . - . ID=gene-L8R42_002719;Name=L8R42_002719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002719 DAFVNP010000044.1 Protein Homology CDS 24378 24611 . - 0 ID=cds-HBQ7390787.1;Parent=gene-L8R42_002719;Dbxref=NCBI_GP:HBQ7390787.1;Name=HBQ7390787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=L8R42_002719;product=DUF2526 family protein;protein_id=HBQ7390787.1;transl_table=11 DAFVNP010000044.1 tpg gene 24835 26160 . + . ID=gene-L8R42_002720;Name=L8R42_002720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002720 DAFVNP010000044.1 Protein Homology CDS 24835 26160 . + 0 ID=cds-HBQ7390788.1;Parent=gene-L8R42_002720;Dbxref=NCBI_GP:HBQ7390788.1;Name=HBQ7390788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=L8R42_002720;product=ssrAB-activated protein;protein_id=HBQ7390788.1;transl_table=11 DAFVNP010000044.1 tpg gene 26165 29146 . + . ID=gene-L8R42_002721;Name=L8R42_002721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002721 DAFVNP010000044.1 Protein Homology CDS 26165 29146 . + 0 ID=cds-HBQ7390789.1;Parent=gene-L8R42_002721;Dbxref=NCBI_GP:HBQ7390789.1;Name=HBQ7390789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=L8R42_002721;product=virulence factor SrfB;protein_id=HBQ7390789.1;transl_table=11 DAFVNP010000044.1 tpg gene 29143 31287 . + . ID=gene-L8R42_002722;Name=L8R42_002722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002722 DAFVNP010000044.1 Protein Homology CDS 29143 31287 . + 0 ID=cds-HBQ7390790.1;Parent=gene-L8R42_002722;Dbxref=NCBI_GP:HBQ7390790.1;Name=HBQ7390790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=L8R42_002722;product=virulence effector SrfC;protein_id=HBQ7390790.1;transl_table=11 DAFVNP010000044.1 tpg gene 31332 31505 . - . ID=gene-L8R42_002723;Name=L8R42_002723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002723 DAFVNP010000044.1 Protein Homology CDS 31332 31505 . - 0 ID=cds-HBQ7390791.1;Parent=gene-L8R42_002723;Dbxref=NCBI_GP:HBQ7390791.1;Name=HBQ7390791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=L8R42_002723;product=GhoT/OrtT family toxin;protein_id=HBQ7390791.1;transl_table=11 DAFVNP010000044.1 tpg gene 31704 31799 . + . ID=gene-L8R42_002724;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=L8R42_002724 DAFVNP010000044.1 Protein Homology CDS 31704 31799 . + 0 ID=cds-HBQ7390792.1;Parent=gene-L8R42_002724;Dbxref=NCBI_GP:HBQ7390792.1;Name=HBQ7390792.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=L8R42_002724;product=stress response membrane protein YncL;protein_id=HBQ7390792.1;transl_table=11 DAFVNP010000044.1 tpg gene 31904 33349 . - . ID=gene-L8R42_002725;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=L8R42_002725 DAFVNP010000044.1 Protein Homology CDS 31904 33349 . - 0 ID=cds-HBQ7390793.1;Parent=gene-L8R42_002725;Dbxref=NCBI_GP:HBQ7390793.1;Name=HBQ7390793.1;gbkey=CDS;gene=patD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=L8R42_002725;product=aminobutyraldehyde dehydrogenase;protein_id=HBQ7390793.1;transl_table=11 DAFVNP010000044.1 tpg gene 33464 34888 . - . ID=gene-L8R42_002726;Name=L8R42_002726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002726 DAFVNP010000044.1 Protein Homology CDS 33464 34888 . - 0 ID=cds-HBQ7390794.1;Parent=gene-L8R42_002726;Dbxref=NCBI_GP:HBQ7390794.1;Name=HBQ7390794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=L8R42_002726;product=PLP-dependent aminotransferase family protein;protein_id=HBQ7390794.1;transl_table=11 DAFVNP010000044.1 tpg gene 35024 35794 . - . ID=gene-L8R42_002727;Name=L8R42_002727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002727 DAFVNP010000044.1 Protein Homology CDS 35024 35794 . - 0 ID=cds-HBQ7390795.1;Parent=gene-L8R42_002727;Dbxref=NCBI_GP:HBQ7390795.1;Name=HBQ7390795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=L8R42_002727;product=M15 family metallopeptidase;protein_id=HBQ7390795.1;transl_table=11 DAFVNP010000044.1 tpg pseudogene 36054 36285 . - . ID=gene-L8R42_002728;Name=L8R42_002728;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002728;pseudo=true DAFVNP010000044.1 Protein Homology CDS 36054 36285 . - 0 ID=cds-L8R42_002728;Parent=gene-L8R42_002728;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=L8R42_002728;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000044.1 tpg gene 36318 36716 . - . ID=gene-L8R42_002729;Name=L8R42_002729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002729 DAFVNP010000044.1 Protein Homology CDS 36318 36716 . - 0 ID=cds-HBQ7390796.1;Parent=gene-L8R42_002729;Dbxref=NCBI_GP:HBQ7390796.1;Name=HBQ7390796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=L8R42_002729;product=D-alanyl-D-alanine dipeptidase;protein_id=HBQ7390796.1;transl_table=11 DAFVNP010000044.1 tpg gene 37245 38195 . + . ID=gene-L8R42_002730;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=L8R42_002730 DAFVNP010000044.1 Protein Homology CDS 37245 38195 . + 0 ID=cds-HBQ7390797.1;Parent=gene-L8R42_002730;Dbxref=NCBI_GP:HBQ7390797.1;Name=HBQ7390797.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=L8R42_002730;product=SPI-2 type III secretion system effector SifB;protein_id=HBQ7390797.1;transl_table=11 ##sequence-region DAFVNP010000045.1 1 37035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000045.1 tpg region 1 37035 . + . ID=DAFVNP010000045.1:1..37035;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000045.1 tpg gene 1 462 . + . ID=gene-L8R42_002731;Name=L8R42_002731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002731;partial=true;start_range=.,1 DAFVNP010000045.1 Protein Homology CDS 1 462 . + 0 ID=cds-HBQ7390798.1;Parent=gene-L8R42_002731;Dbxref=NCBI_GP:HBQ7390798.1;Name=HBQ7390798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=L8R42_002731;partial=true;product=family 43 glycosylhydrolase;protein_id=HBQ7390798.1;start_range=.,1;transl_table=11 DAFVNP010000045.1 tpg gene 554 1408 . - . ID=gene-L8R42_002732;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=L8R42_002732 DAFVNP010000045.1 Protein Homology CDS 554 1408 . - 0 ID=cds-HBQ7390799.1;Parent=gene-L8R42_002732;Dbxref=NCBI_GP:HBQ7390799.1;Name=HBQ7390799.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=L8R42_002732;product=beta-lactamase regulator AmpE;protein_id=HBQ7390799.1;transl_table=11 DAFVNP010000045.1 tpg gene 1405 1968 . - . ID=gene-L8R42_002733;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=L8R42_002733 DAFVNP010000045.1 Protein Homology CDS 1405 1968 . - 0 ID=cds-HBQ7390800.1;Parent=gene-L8R42_002733;Dbxref=NCBI_GP:HBQ7390800.1;Name=HBQ7390800.1;gbkey=CDS;gene=ampD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=L8R42_002733;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=HBQ7390800.1;transl_table=11 DAFVNP010000045.1 tpg gene 2056 2949 . + . ID=gene-L8R42_002734;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=L8R42_002734 DAFVNP010000045.1 Protein Homology CDS 2056 2949 . + 0 ID=cds-HBQ7390801.1;Parent=gene-L8R42_002734;Dbxref=NCBI_GP:HBQ7390801.1;Name=HBQ7390801.1;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308140.1;locus_tag=L8R42_002734;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=HBQ7390801.1;transl_table=11 DAFVNP010000045.1 tpg gene 3171 3608 . + . ID=gene-L8R42_002735;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=L8R42_002735 DAFVNP010000045.1 Protein Homology CDS 3171 3608 . + 0 ID=cds-HBQ7390802.1;Parent=gene-L8R42_002735;Dbxref=NCBI_GP:HBQ7390802.1;Name=HBQ7390802.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=L8R42_002735;product=prepilin peptidase-dependent pilin;protein_id=HBQ7390802.1;transl_table=11 DAFVNP010000045.1 tpg gene 3618 5003 . + . ID=gene-L8R42_002736;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=L8R42_002736 DAFVNP010000045.1 Protein Homology CDS 3618 5003 . + 0 ID=cds-HBQ7390803.1;Parent=gene-L8R42_002736;Dbxref=NCBI_GP:HBQ7390803.1;Name=HBQ7390803.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=L8R42_002736;product=type II secretion system protein GspE;protein_id=HBQ7390803.1;transl_table=11 DAFVNP010000045.1 tpg gene 4993 6195 . + . ID=gene-L8R42_002737;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=L8R42_002737 DAFVNP010000045.1 Protein Homology CDS 4993 6195 . + 0 ID=cds-HBQ7390804.1;Parent=gene-L8R42_002737;Dbxref=NCBI_GP:HBQ7390804.1;Name=HBQ7390804.1;gbkey=CDS;gene=hofC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=L8R42_002737;product=protein transport protein HofC;protein_id=HBQ7390804.1;transl_table=11 DAFVNP010000045.1 tpg gene 6226 7269 . - . ID=gene-L8R42_002738;Name=L8R42_002738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002738 DAFVNP010000045.1 Protein Homology CDS 6226 7269 . - 0 ID=cds-HBQ7390805.1;Parent=gene-L8R42_002738;Dbxref=NCBI_GP:HBQ7390805.1;Name=HBQ7390805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=L8R42_002738;product=GMP reductase;protein_id=HBQ7390805.1;transl_table=11 DAFVNP010000045.1 tpg gene 7495 8115 . + . ID=gene-L8R42_002739;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=L8R42_002739 DAFVNP010000045.1 Protein Homology CDS 7495 8115 . + 0 ID=cds-HBQ7390806.1;Parent=gene-L8R42_002739;Dbxref=NCBI_GP:HBQ7390806.1;Name=HBQ7390806.1;gbkey=CDS;gene=coaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=L8R42_002739;product=dephospho-CoA kinase;protein_id=HBQ7390806.1;transl_table=11 DAFVNP010000045.1 tpg gene 8115 8858 . + . ID=gene-L8R42_002740;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=L8R42_002740 DAFVNP010000045.1 Protein Homology CDS 8115 8858 . + 0 ID=cds-HBQ7390807.1;Parent=gene-L8R42_002740;Dbxref=NCBI_GP:HBQ7390807.1;Name=HBQ7390807.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=L8R42_002740;product=cell division protein ZapD;protein_id=HBQ7390807.1;transl_table=11 DAFVNP010000045.1 tpg gene 8868 9059 . + . ID=gene-L8R42_002741;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=L8R42_002741 DAFVNP010000045.1 Protein Homology CDS 8868 9059 . + 0 ID=cds-HBQ7390808.1;Parent=gene-L8R42_002741;Dbxref=NCBI_GP:HBQ7390808.1;Name=HBQ7390808.1;gbkey=CDS;gene=yacG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=L8R42_002741;product=DNA gyrase inhibitor YacG;protein_id=HBQ7390808.1;transl_table=11 DAFVNP010000045.1 tpg pseudogene 9056 9175 . - . ID=gene-L8R42_002742;Name=L8R42_002742;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002742;pseudo=true DAFVNP010000045.1 Protein Homology CDS 9056 9175 . - 0 ID=cds-L8R42_002742;Parent=gene-L8R42_002742;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=L8R42_002742;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 DAFVNP010000045.1 tpg gene 9382 9777 . - . ID=gene-L8R42_002743;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=L8R42_002743 DAFVNP010000045.1 Protein Homology CDS 9382 9777 . - 0 ID=cds-HBQ7390809.1;Parent=gene-L8R42_002743;Dbxref=NCBI_GP:HBQ7390809.1;Name=HBQ7390809.1;gbkey=CDS;gene=mutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459142.1;locus_tag=L8R42_002743;product=8-oxo-dGTP diphosphatase MutT;protein_id=HBQ7390809.1;transl_table=11 DAFVNP010000045.1 tpg gene 9929 12634 . - . ID=gene-L8R42_002744;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=L8R42_002744 DAFVNP010000045.1 Protein Homology CDS 9929 12634 . - 0 ID=cds-HBQ7390810.1;Parent=gene-L8R42_002744;Dbxref=NCBI_GP:HBQ7390810.1;Name=HBQ7390810.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=L8R42_002744;product=preprotein translocase subunit SecA;protein_id=HBQ7390810.1;transl_table=11 DAFVNP010000045.1 tpg gene 12696 13193 . - . ID=gene-L8R42_002745;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=L8R42_002745 DAFVNP010000045.1 Protein Homology CDS 12696 13193 . - 0 ID=cds-HBQ7390811.1;Parent=gene-L8R42_002745;Dbxref=NCBI_GP:HBQ7390811.1;Name=HBQ7390811.1;gbkey=CDS;gene=secM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=L8R42_002745;product=secA regulator SecM;protein_id=HBQ7390811.1;transl_table=11 DAFVNP010000045.1 tpg gene 13472 14389 . - . ID=gene-L8R42_002746;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=L8R42_002746 DAFVNP010000045.1 Protein Homology CDS 13472 14389 . - 0 ID=cds-HBQ7390812.1;Parent=gene-L8R42_002746;Dbxref=NCBI_GP:HBQ7390812.1;Name=HBQ7390812.1;gbkey=CDS;gene=lpxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=L8R42_002746;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=HBQ7390812.1;transl_table=11 DAFVNP010000045.1 tpg gene 14490 15641 . - . ID=gene-L8R42_002747;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=L8R42_002747 DAFVNP010000045.1 Protein Homology CDS 14490 15641 . - 0 ID=cds-HBQ7390813.1;Parent=gene-L8R42_002747;Dbxref=NCBI_GP:HBQ7390813.1;Name=HBQ7390813.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=L8R42_002747;product=cell division protein FtsZ;protein_id=HBQ7390813.1;transl_table=11 DAFVNP010000045.1 tpg gene 15702 16964 . - . ID=gene-L8R42_002748;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=L8R42_002748 DAFVNP010000045.1 Protein Homology CDS 15702 16964 . - 0 ID=cds-HBQ7390814.1;Parent=gene-L8R42_002748;Dbxref=NCBI_GP:HBQ7390814.1;Name=HBQ7390814.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=L8R42_002748;product=cell division protein FtsA;protein_id=HBQ7390814.1;transl_table=11 DAFVNP010000045.1 tpg gene 16961 17791 . - . ID=gene-L8R42_002749;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=L8R42_002749 DAFVNP010000045.1 Protein Homology CDS 16961 17791 . - 0 ID=cds-HBQ7390815.1;Parent=gene-L8R42_002749;Dbxref=NCBI_GP:HBQ7390815.1;Name=HBQ7390815.1;gbkey=CDS;gene=ftsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=L8R42_002749;product=cell division protein FtsQ;protein_id=HBQ7390815.1;transl_table=11 DAFVNP010000045.1 tpg gene 17793 18713 . - . ID=gene-L8R42_002750;Name=L8R42_002750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002750 DAFVNP010000045.1 Protein Homology CDS 17793 18713 . - 0 ID=cds-HBQ7390816.1;Parent=gene-L8R42_002750;Dbxref=NCBI_GP:HBQ7390816.1;Name=HBQ7390816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=L8R42_002750;product=D-alanine--D-alanine ligase;protein_id=HBQ7390816.1;transl_table=11 DAFVNP010000045.1 tpg gene 18706 20181 . - . ID=gene-L8R42_002751;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=L8R42_002751 DAFVNP010000045.1 Protein Homology CDS 18706 20181 . - 0 ID=cds-HBQ7390817.1;Parent=gene-L8R42_002751;Dbxref=NCBI_GP:HBQ7390817.1;Name=HBQ7390817.1;gbkey=CDS;gene=murC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=L8R42_002751;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=HBQ7390817.1;transl_table=11 DAFVNP010000045.1 tpg gene 20300 21367 . - . ID=gene-L8R42_002752;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=L8R42_002752 DAFVNP010000045.1 Protein Homology CDS 20300 21367 . - 0 ID=cds-HBQ7390818.1;Parent=gene-L8R42_002752;Dbxref=NCBI_GP:HBQ7390818.1;Name=HBQ7390818.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=L8R42_002752;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=HBQ7390818.1;transl_table=11 DAFVNP010000045.1 tpg gene 21364 22608 . - . ID=gene-L8R42_002753;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=L8R42_002753 DAFVNP010000045.1 Protein Homology CDS 21364 22608 . - 0 ID=cds-HBQ7390819.1;Parent=gene-L8R42_002753;Dbxref=NCBI_GP:HBQ7390819.1;Name=HBQ7390819.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=L8R42_002753;product=cell division protein FtsW;protein_id=HBQ7390819.1;transl_table=11 DAFVNP010000045.1 tpg gene 22608 23924 . - . ID=gene-L8R42_002754;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=L8R42_002754 DAFVNP010000045.1 Protein Homology CDS 22608 23924 . - 0 ID=cds-HBQ7390820.1;Parent=gene-L8R42_002754;Dbxref=NCBI_GP:HBQ7390820.1;Name=HBQ7390820.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=L8R42_002754;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=HBQ7390820.1;transl_table=11 DAFVNP010000045.1 tpg gene 23927 25009 . - . ID=gene-L8R42_002755;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=L8R42_002755 DAFVNP010000045.1 Protein Homology CDS 23927 25009 . - 0 ID=cds-HBQ7390821.1;Parent=gene-L8R42_002755;Dbxref=NCBI_GP:HBQ7390821.1;Name=HBQ7390821.1;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=L8R42_002755;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=HBQ7390821.1;transl_table=11 DAFVNP010000045.1 tpg gene 25003 26361 . - . ID=gene-L8R42_002756;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=L8R42_002756 DAFVNP010000045.1 Protein Homology CDS 25003 26361 . - 0 ID=cds-HBQ7390822.1;Parent=gene-L8R42_002756;Dbxref=NCBI_GP:HBQ7390822.1;Name=HBQ7390822.1;gbkey=CDS;gene=murF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=L8R42_002756;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=HBQ7390822.1;transl_table=11 DAFVNP010000045.1 tpg gene 26358 27845 . - . ID=gene-L8R42_002757;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=L8R42_002757 DAFVNP010000045.1 Protein Homology CDS 26358 27845 . - 0 ID=cds-HBQ7390823.1;Parent=gene-L8R42_002757;Dbxref=NCBI_GP:HBQ7390823.1;Name=HBQ7390823.1;gbkey=CDS;gene=murE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=L8R42_002757;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=HBQ7390823.1;transl_table=11 DAFVNP010000045.1 tpg gene 27832 29598 . - . ID=gene-L8R42_002758;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=L8R42_002758 DAFVNP010000045.1 Protein Homology CDS 27832 29598 . - 0 ID=cds-HBQ7390824.1;Parent=gene-L8R42_002758;Dbxref=NCBI_GP:HBQ7390824.1;Name=HBQ7390824.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=L8R42_002758;product=peptidoglycan glycosyltransferase FtsI;protein_id=HBQ7390824.1;transl_table=11 DAFVNP010000045.1 tpg gene 29614 29979 . - . ID=gene-L8R42_002759;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=L8R42_002759 DAFVNP010000045.1 Protein Homology CDS 29614 29979 . - 0 ID=cds-HBQ7390825.1;Parent=gene-L8R42_002759;Dbxref=NCBI_GP:HBQ7390825.1;Name=HBQ7390825.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=L8R42_002759;product=cell division protein FtsL;protein_id=HBQ7390825.1;transl_table=11 DAFVNP010000045.1 tpg gene 29976 30917 . - . ID=gene-L8R42_002760;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=L8R42_002760 DAFVNP010000045.1 Protein Homology CDS 29976 30917 . - 0 ID=cds-HBQ7390826.1;Parent=gene-L8R42_002760;Dbxref=NCBI_GP:HBQ7390826.1;Name=HBQ7390826.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=L8R42_002760;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=HBQ7390826.1;transl_table=11 DAFVNP010000045.1 tpg gene 30919 31377 . - . ID=gene-L8R42_002761;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=L8R42_002761 DAFVNP010000045.1 Protein Homology CDS 30919 31377 . - 0 ID=cds-HBQ7390827.1;Parent=gene-L8R42_002761;Dbxref=NCBI_GP:HBQ7390827.1;Name=HBQ7390827.1;gbkey=CDS;gene=mraZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=L8R42_002761;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=HBQ7390827.1;transl_table=11 DAFVNP010000045.1 tpg gene 31983 32987 . - . ID=gene-L8R42_002762;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=L8R42_002762 DAFVNP010000045.1 Protein Homology CDS 31983 32987 . - 0 ID=cds-HBQ7390828.1;Parent=gene-L8R42_002762;Dbxref=NCBI_GP:HBQ7390828.1;Name=HBQ7390828.1;gbkey=CDS;gene=cra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=L8R42_002762;product=catabolite repressor/activator;protein_id=HBQ7390828.1;transl_table=11 DAFVNP010000045.1 tpg gene 33271 33762 . - . ID=gene-L8R42_002763;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=L8R42_002763 DAFVNP010000045.1 Protein Homology CDS 33271 33762 . - 0 ID=cds-HBQ7390829.1;Parent=gene-L8R42_002763;Dbxref=NCBI_GP:HBQ7390829.1;Name=HBQ7390829.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=L8R42_002763;product=acetolactate synthase small subunit;protein_id=HBQ7390829.1;transl_table=11 DAFVNP010000045.1 tpg gene 33765 35489 . - . ID=gene-L8R42_002764;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=L8R42_002764 DAFVNP010000045.1 Protein Homology CDS 33765 35489 . - 0 ID=cds-HBQ7390830.1;Parent=gene-L8R42_002764;Dbxref=NCBI_GP:HBQ7390830.1;Name=HBQ7390830.1;gbkey=CDS;gene=ilvI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=L8R42_002764;product=acetolactate synthase 3 large subunit;protein_id=HBQ7390830.1;transl_table=11 DAFVNP010000045.1 tpg gene 35811 36755 . - . ID=gene-L8R42_002765;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=L8R42_002765 DAFVNP010000045.1 Protein Homology CDS 35811 36755 . - 0 ID=cds-HBQ7390831.1;Parent=gene-L8R42_002765;Dbxref=NCBI_GP:HBQ7390831.1;Name=HBQ7390831.1;gbkey=CDS;gene=leuO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=L8R42_002765;product=transcriptional regulator LeuO;protein_id=HBQ7390831.1;transl_table=11 ##sequence-region DAFVNP010000046.1 1 36327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000046.1 tpg region 1 36327 . + . ID=DAFVNP010000046.1:1..36327;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000046.1 tpg gene 24 881 . + . ID=gene-L8R42_002766;Name=L8R42_002766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002766 DAFVNP010000046.1 Protein Homology CDS 24 881 . + 0 ID=cds-HBQ7390832.1;Parent=gene-L8R42_002766;Dbxref=NCBI_GP:HBQ7390832.1;Name=HBQ7390832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=L8R42_002766;product=YjeJ family protein;protein_id=HBQ7390832.1;transl_table=11 DAFVNP010000046.1 tpg gene 929 1282 . - . ID=gene-L8R42_002767;Name=L8R42_002767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002767 DAFVNP010000046.1 Protein Homology CDS 929 1282 . - 0 ID=cds-HBQ7390833.1;Parent=gene-L8R42_002767;Dbxref=NCBI_GP:HBQ7390833.1;Name=HBQ7390833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463195.2;locus_tag=L8R42_002767;product=DUF4156 domain-containing protein;protein_id=HBQ7390833.1;transl_table=11 DAFVNP010000046.1 tpg gene 1526 3172 . - . ID=gene-L8R42_002768;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=L8R42_002768 DAFVNP010000046.1 Protein Homology CDS 1526 3172 . - 0 ID=cds-HBQ7390834.1;Parent=gene-L8R42_002768;Dbxref=NCBI_GP:HBQ7390834.1;Name=HBQ7390834.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=L8R42_002768;product=chaperonin GroEL;protein_id=HBQ7390834.1;transl_table=11 DAFVNP010000046.1 tpg gene 3216 3509 . - . ID=gene-L8R42_002769;Name=L8R42_002769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002769 DAFVNP010000046.1 Protein Homology CDS 3216 3509 . - 0 ID=cds-HBQ7390835.1;Parent=gene-L8R42_002769;Dbxref=NCBI_GP:HBQ7390835.1;Name=HBQ7390835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=L8R42_002769;product=co-chaperone GroES;protein_id=HBQ7390835.1;transl_table=11 DAFVNP010000046.1 tpg gene 3785 5026 . + . ID=gene-L8R42_002770;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=L8R42_002770 DAFVNP010000046.1 Protein Homology CDS 3785 5026 . + 0 ID=cds-HBQ7390836.1;Parent=gene-L8R42_002770;Dbxref=NCBI_GP:HBQ7390836.1;Name=HBQ7390836.1;gbkey=CDS;gene=yjeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=L8R42_002770;product=L-methionine/branched-chain amino acid transporter;protein_id=HBQ7390836.1;transl_table=11 DAFVNP010000046.1 tpg gene 5085 5561 . - . ID=gene-L8R42_002771;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=L8R42_002771 DAFVNP010000046.1 Protein Homology CDS 5085 5561 . - 0 ID=cds-HBQ7390837.1;Parent=gene-L8R42_002771;Dbxref=NCBI_GP:HBQ7390837.1;Name=HBQ7390837.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=L8R42_002771;product=membrane protein FxsA;protein_id=HBQ7390837.1;transl_table=11 DAFVNP010000046.1 tpg gene 5902 7338 . + . ID=gene-L8R42_002772;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=L8R42_002772 DAFVNP010000046.1 Protein Homology CDS 5902 7338 . + 0 ID=cds-HBQ7390838.1;Parent=gene-L8R42_002772;Dbxref=NCBI_GP:HBQ7390838.1;Name=HBQ7390838.1;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=L8R42_002772;product=aspartate ammonia-lyase;protein_id=HBQ7390838.1;transl_table=11 DAFVNP010000046.1 tpg gene 7453 8754 . + . ID=gene-L8R42_002773;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=L8R42_002773 DAFVNP010000046.1 Protein Homology CDS 7453 8754 . + 0 ID=cds-HBQ7390839.1;Parent=gene-L8R42_002773;Dbxref=NCBI_GP:HBQ7390839.1;Name=HBQ7390839.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=L8R42_002773;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=HBQ7390839.1;transl_table=11 DAFVNP010000046.1 tpg gene 8875 9222 . + . ID=gene-L8R42_002774;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=L8R42_002774 DAFVNP010000046.1 Protein Homology CDS 8875 9222 . + 0 ID=cds-HBQ7390840.1;Parent=gene-L8R42_002774;Dbxref=NCBI_GP:HBQ7390840.1;Name=HBQ7390840.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=L8R42_002774;product=divalent cation tolerance protein CutA;protein_id=HBQ7390840.1;transl_table=11 DAFVNP010000046.1 tpg gene 9198 10901 . + . ID=gene-L8R42_002775;Name=L8R42_002775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002775 DAFVNP010000046.1 Protein Homology CDS 9198 10901 . + 0 ID=cds-HBQ7390841.1;Parent=gene-L8R42_002775;Dbxref=NCBI_GP:HBQ7390841.1;Name=HBQ7390841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=L8R42_002775;product=protein-disulfide reductase DsbD;protein_id=HBQ7390841.1;transl_table=11 DAFVNP010000046.1 tpg gene 10938 11513 . + . ID=gene-L8R42_002776;Name=L8R42_002776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002776 DAFVNP010000046.1 Protein Homology CDS 10938 11513 . + 0 ID=cds-HBQ7390842.1;Parent=gene-L8R42_002776;Dbxref=NCBI_GP:HBQ7390842.1;Name=HBQ7390842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=L8R42_002776;product=transcriptional regulator;protein_id=HBQ7390842.1;transl_table=11 DAFVNP010000046.1 tpg gene 11629 11704 . + . ID=gene-L8R42_002777;Name=L8R42_002777;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_002777 DAFVNP010000046.1 tRNAscan-SE tRNA 11629 11704 . + . ID=rna-L8R42_002777;Parent=gene-L8R42_002777;anticodon=(pos:11662..11664);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002777;product=tRNA-Phe DAFVNP010000046.1 tRNAscan-SE exon 11629 11704 . + . ID=exon-L8R42_002777-1;Parent=rna-L8R42_002777;anticodon=(pos:11662..11664);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002777;product=tRNA-Phe DAFVNP010000046.1 tpg gene 11784 11843 . - . ID=gene-L8R42_002778;Name=L8R42_002778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002778 DAFVNP010000046.1 Protein Homology CDS 11784 11843 . - 0 ID=cds-HBQ7390843.1;Parent=gene-L8R42_002778;Dbxref=NCBI_GP:HBQ7390843.1;Name=HBQ7390843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565644.1;locus_tag=L8R42_002778;product=hypothetical protein;protein_id=HBQ7390843.1;transl_table=11 DAFVNP010000046.1 tpg gene 12415 13167 . + . ID=gene-L8R42_002779;Name=L8R42_002779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002779 DAFVNP010000046.1 Protein Homology CDS 12415 13167 . + 0 ID=cds-HBQ7390844.1;Parent=gene-L8R42_002779;Dbxref=NCBI_GP:HBQ7390844.1;Name=HBQ7390844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=L8R42_002779;product=non-specific acid phosphatase;protein_id=HBQ7390844.1;transl_table=11 DAFVNP010000046.1 tpg gene 13314 14162 . - . ID=gene-L8R42_002780;Name=L8R42_002780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002780 DAFVNP010000046.1 Protein Homology CDS 13314 14162 . - 0 ID=cds-HBQ7390845.1;Parent=gene-L8R42_002780;Dbxref=NCBI_GP:HBQ7390845.1;Name=HBQ7390845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=L8R42_002780;product=YjiK family protein;protein_id=HBQ7390845.1;transl_table=11 DAFVNP010000046.1 tpg gene 14447 14659 . - . ID=gene-L8R42_002781;Name=L8R42_002781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002781 DAFVNP010000046.1 Protein Homology CDS 14447 14659 . - 0 ID=cds-HBQ7390846.1;Parent=gene-L8R42_002781;Dbxref=NCBI_GP:HBQ7390846.1;Name=HBQ7390846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063792.1;locus_tag=L8R42_002781;product=faeA-like family protein;protein_id=HBQ7390846.1;transl_table=11 DAFVNP010000046.1 tpg gene 14732 15316 . - . ID=gene-L8R42_002782;Name=L8R42_002782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002782 DAFVNP010000046.1 Protein Homology CDS 14732 15316 . - 0 ID=cds-HBQ7390847.1;Parent=gene-L8R42_002782;Dbxref=NCBI_GP:HBQ7390847.1;Name=HBQ7390847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=L8R42_002782;product=hypothetical protein;protein_id=HBQ7390847.1;transl_table=11 DAFVNP010000046.1 tpg gene 15442 16155 . - . ID=gene-L8R42_002783;Name=L8R42_002783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002783 DAFVNP010000046.1 Protein Homology CDS 15442 16155 . - 0 ID=cds-HBQ7390848.1;Parent=gene-L8R42_002783;Dbxref=NCBI_GP:HBQ7390848.1;Name=HBQ7390848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801115.1;locus_tag=L8R42_002783;product=fimbrial protein;protein_id=HBQ7390848.1;transl_table=11 DAFVNP010000046.1 tpg gene 16155 16430 . - . ID=gene-L8R42_002784;Name=L8R42_002784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002784 DAFVNP010000046.1 Protein Homology CDS 16155 16430 . - 0 ID=cds-HBQ7390849.1;Parent=gene-L8R42_002784;Dbxref=NCBI_GP:HBQ7390849.1;Name=HBQ7390849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020576.1;locus_tag=L8R42_002784;product=hypothetical protein;protein_id=HBQ7390849.1;transl_table=11 DAFVNP010000046.1 tpg gene 16417 17181 . - . ID=gene-L8R42_002785;Name=L8R42_002785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002785 DAFVNP010000046.1 Protein Homology CDS 16417 17181 . - 0 ID=cds-HBQ7390850.1;Parent=gene-L8R42_002785;Dbxref=NCBI_GP:HBQ7390850.1;Name=HBQ7390850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000758129.1;locus_tag=L8R42_002785;product=fimbrial protein;protein_id=HBQ7390850.1;transl_table=11 DAFVNP010000046.1 tpg gene 17209 18006 . - . ID=gene-L8R42_002786;Name=faeH;gbkey=Gene;gene=faeH;gene_biotype=protein_coding;locus_tag=L8R42_002786 DAFVNP010000046.1 Protein Homology CDS 17209 18006 . - 0 ID=cds-HBQ7390851.1;Parent=gene-L8R42_002786;Dbxref=NCBI_GP:HBQ7390851.1;Name=HBQ7390851.1;gbkey=CDS;gene=faeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704731.1;locus_tag=L8R42_002786;product=F4 (K88) fimbria minor subunit FaeH;protein_id=HBQ7390851.1;transl_table=11 DAFVNP010000046.1 tpg gene 18239 19009 . - . ID=gene-L8R42_002787;Name=L8R42_002787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002787 DAFVNP010000046.1 Protein Homology CDS 18239 19009 . - 0 ID=cds-HBQ7390852.1;Parent=gene-L8R42_002787;Dbxref=NCBI_GP:HBQ7390852.1;Name=HBQ7390852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751769.1;locus_tag=L8R42_002787;product=hypothetical protein;protein_id=HBQ7390852.1;transl_table=11 DAFVNP010000046.1 tpg gene 19232 19723 . - . ID=gene-L8R42_002788;Name=L8R42_002788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002788 DAFVNP010000046.1 Protein Homology CDS 19232 19723 . - 0 ID=cds-HBQ7390853.1;Parent=gene-L8R42_002788;Dbxref=NCBI_GP:HBQ7390853.1;Name=HBQ7390853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709797.1;locus_tag=L8R42_002788;product=DUF5462 family protein;protein_id=HBQ7390853.1;transl_table=11 DAFVNP010000046.1 tpg gene 19759 20550 . - . ID=gene-L8R42_002789;Name=L8R42_002789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002789 DAFVNP010000046.1 Protein Homology CDS 19759 20550 . - 0 ID=cds-HBQ7390854.1;Parent=gene-L8R42_002789;Dbxref=NCBI_GP:HBQ7390854.1;Name=HBQ7390854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518563.1;locus_tag=L8R42_002789;product=fimbria/pilus periplasmic chaperone;protein_id=HBQ7390854.1;transl_table=11 DAFVNP010000046.1 tpg gene 20573 23011 . - . ID=gene-L8R42_002790;Name=faeD;gbkey=Gene;gene=faeD;gene_biotype=protein_coding;locus_tag=L8R42_002790 DAFVNP010000046.1 Protein Homology CDS 20573 23011 . - 0 ID=cds-HBQ7390855.1;Parent=gene-L8R42_002790;Dbxref=NCBI_GP:HBQ7390855.1;Name=HBQ7390855.1;gbkey=CDS;gene=faeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001014136.1;locus_tag=L8R42_002790;product=F4 (K88) fimbrial usher FaeD;protein_id=HBQ7390855.1;transl_table=11 DAFVNP010000046.1 tpg gene 23021 23560 . - . ID=gene-L8R42_002791;Name=L8R42_002791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002791 DAFVNP010000046.1 Protein Homology CDS 23021 23560 . - 0 ID=cds-HBQ7390856.1;Parent=gene-L8R42_002791;Dbxref=NCBI_GP:HBQ7390856.1;Name=HBQ7390856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793779.1;locus_tag=L8R42_002791;product=type 1 fimbrial protein;protein_id=HBQ7390856.1;transl_table=11 DAFVNP010000046.1 tpg gene 23595 23849 . - . ID=gene-L8R42_002792;Name=L8R42_002792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002792 DAFVNP010000046.1 Protein Homology CDS 23595 23849 . - 0 ID=cds-HBQ7390857.1;Parent=gene-L8R42_002792;Dbxref=NCBI_GP:HBQ7390857.1;Name=HBQ7390857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375782.1;locus_tag=L8R42_002792;product=transcriptional regulator;protein_id=HBQ7390857.1;transl_table=11 DAFVNP010000046.1 tpg gene 24472 24699 . + . ID=gene-L8R42_002793;Name=L8R42_002793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002793 DAFVNP010000046.1 Protein Homology CDS 24472 24699 . + 0 ID=cds-HBQ7390858.1;Parent=gene-L8R42_002793;Dbxref=NCBI_GP:HBQ7390858.1;Name=HBQ7390858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112995.1;locus_tag=L8R42_002793;product=hypothetical protein;protein_id=HBQ7390858.1;transl_table=11 DAFVNP010000046.1 tpg pseudogene 24974 25222 . - . ID=gene-L8R42_002794;Name=L8R42_002794;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002794;pseudo=true DAFVNP010000046.1 Protein Homology CDS 24974 25222 . - 0 ID=cds-L8R42_002794;Parent=gene-L8R42_002794;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=L8R42_002794;product=IS481 family transposase;pseudo=true;transl_table=11 DAFVNP010000046.1 tpg gene 25437 25928 . - . ID=gene-L8R42_002795;Name=L8R42_002795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002795 DAFVNP010000046.1 Protein Homology CDS 25437 25928 . - 0 ID=cds-HBQ7390859.1;Parent=gene-L8R42_002795;Dbxref=NCBI_GP:HBQ7390859.1;Name=HBQ7390859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=L8R42_002795;product=GNAT family N-acetyltransferase;protein_id=HBQ7390859.1;transl_table=11 DAFVNP010000046.1 tpg gene 25925 26218 . - . ID=gene-L8R42_002796;Name=L8R42_002796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002796 DAFVNP010000046.1 Protein Homology CDS 25925 26218 . - 0 ID=cds-HBQ7390860.1;Parent=gene-L8R42_002796;Dbxref=NCBI_GP:HBQ7390860.1;Name=HBQ7390860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=L8R42_002796;product=DUF1778 domain-containing protein;protein_id=HBQ7390860.1;transl_table=11 DAFVNP010000046.1 tpg gene 26536 26757 . + . ID=gene-L8R42_002797;Name=L8R42_002797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002797 DAFVNP010000046.1 Protein Homology CDS 26536 26757 . + 0 ID=cds-HBQ7390861.1;Parent=gene-L8R42_002797;Dbxref=NCBI_GP:HBQ7390861.1;Name=HBQ7390861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=L8R42_002797;product=hypothetical protein;protein_id=HBQ7390861.1;transl_table=11 DAFVNP010000046.1 tpg gene 27023 27898 . + . ID=gene-L8R42_002798;Name=L8R42_002798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002798 DAFVNP010000046.1 Protein Homology CDS 27023 27898 . + 0 ID=cds-HBQ7390862.1;Parent=gene-L8R42_002798;Dbxref=NCBI_GP:HBQ7390862.1;Name=HBQ7390862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=L8R42_002798;product=AraC family transcriptional regulator;protein_id=HBQ7390862.1;transl_table=11 DAFVNP010000046.1 tpg gene 27895 28182 . + . ID=gene-L8R42_002799;Name=L8R42_002799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002799 DAFVNP010000046.1 Protein Homology CDS 27895 28182 . + 0 ID=cds-HBQ7390863.1;Parent=gene-L8R42_002799;Dbxref=NCBI_GP:HBQ7390863.1;Name=HBQ7390863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=L8R42_002799;product=spore gernimation protein GerE;protein_id=HBQ7390863.1;transl_table=11 DAFVNP010000046.1 tpg pseudogene 28175 28502 . - . ID=gene-L8R42_002800;Name=L8R42_002800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002800;pseudo=true DAFVNP010000046.1 Protein Homology CDS 28175 28502 . - 0 ID=cds-L8R42_002800;Parent=gene-L8R42_002800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466177.1;locus_tag=L8R42_002800;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000046.1 tpg gene 29013 29918 . - . ID=gene-L8R42_002801;Name=L8R42_002801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002801 DAFVNP010000046.1 Protein Homology CDS 29013 29918 . - 0 ID=cds-HBQ7390864.1;Parent=gene-L8R42_002801;Dbxref=NCBI_GP:HBQ7390864.1;Name=HBQ7390864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=L8R42_002801;product=YjiK family protein;protein_id=HBQ7390864.1;transl_table=11 DAFVNP010000046.1 tpg gene 30222 31622 . + . ID=gene-L8R42_002802;Name=L8R42_002802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002802 DAFVNP010000046.1 Protein Homology CDS 30222 31622 . + 0 ID=cds-HBQ7390865.1;Parent=gene-L8R42_002802;Dbxref=NCBI_GP:HBQ7390865.1;Name=HBQ7390865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=L8R42_002802;product=DUF1996 domain-containing protein;protein_id=HBQ7390865.1;transl_table=11 DAFVNP010000046.1 tpg gene 31706 32359 . - . ID=gene-L8R42_002803;Name=L8R42_002803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002803 DAFVNP010000046.1 Protein Homology CDS 31706 32359 . - 0 ID=cds-HBQ7390866.1;Parent=gene-L8R42_002803;Dbxref=NCBI_GP:HBQ7390866.1;Name=HBQ7390866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463173.1;locus_tag=L8R42_002803;product=molecular chaperone;protein_id=HBQ7390866.1;transl_table=11 DAFVNP010000046.1 tpg gene 32374 33147 . - . ID=gene-L8R42_002804;Name=L8R42_002804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002804 DAFVNP010000046.1 Protein Homology CDS 32374 33147 . - 0 ID=cds-HBQ7390867.1;Parent=gene-L8R42_002804;Dbxref=NCBI_GP:HBQ7390867.1;Name=HBQ7390867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=L8R42_002804;product=dimethyl sulfoxide reductase anchor subunit;protein_id=HBQ7390867.1;transl_table=11 DAFVNP010000046.1 tpg gene 33140 33766 . - . ID=gene-L8R42_002805;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=L8R42_002805 DAFVNP010000046.1 Protein Homology CDS 33140 33766 . - 0 ID=cds-HBQ7390868.1;Parent=gene-L8R42_002805;Dbxref=NCBI_GP:HBQ7390868.1;Name=HBQ7390868.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=L8R42_002805;product=dimethylsulfoxide reductase subunit B;protein_id=HBQ7390868.1;transl_table=11 DAFVNP010000046.1 tpg gene 33780 36209 . - . ID=gene-L8R42_002806;Name=L8R42_002806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002806 DAFVNP010000046.1 Protein Homology CDS 33780 36209 . - 0 ID=cds-HBQ7390869.1;Parent=gene-L8R42_002806;Dbxref=NCBI_GP:HBQ7390869.1;Name=HBQ7390869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=L8R42_002806;product=molybdopterin-dependent oxidoreductase;protein_id=HBQ7390869.1;transl_table=11 ##sequence-region DAFVNP010000047.1 1 36295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000047.1 tpg region 1 36295 . + . ID=DAFVNP010000047.1:1..36295;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000047.1 tpg gene 1 260 . - . ID=gene-L8R42_002807;Name=L8R42_002807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002807;partial=true;start_range=.,1 DAFVNP010000047.1 Protein Homology CDS 1 260 . - 0 ID=cds-HBQ7390870.1;Parent=gene-L8R42_002807;Dbxref=NCBI_GP:HBQ7390870.1;Name=HBQ7390870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=L8R42_002807;partial=true;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=HBQ7390870.1;start_range=.,1;transl_table=11 DAFVNP010000047.1 tpg gene 276 1022 . - . ID=gene-L8R42_002808;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=L8R42_002808 DAFVNP010000047.1 Protein Homology CDS 276 1022 . - 0 ID=cds-HBQ7390871.1;Parent=gene-L8R42_002808;Dbxref=NCBI_GP:HBQ7390871.1;Name=HBQ7390871.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=L8R42_002808;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=HBQ7390871.1;transl_table=11 DAFVNP010000047.1 tpg gene 1035 2249 . - . ID=gene-L8R42_002809;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=L8R42_002809 DAFVNP010000047.1 Protein Homology CDS 1035 2249 . - 0 ID=cds-HBQ7390872.1;Parent=gene-L8R42_002809;Dbxref=NCBI_GP:HBQ7390872.1;Name=HBQ7390872.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=L8R42_002809;product=putative colanic acid polymerase WcaD;protein_id=HBQ7390872.1;transl_table=11 DAFVNP010000047.1 tpg gene 2224 3441 . - . ID=gene-L8R42_002810;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=L8R42_002810 DAFVNP010000047.1 Protein Homology CDS 2224 3441 . - 0 ID=cds-HBQ7390873.1;Parent=gene-L8R42_002810;Dbxref=NCBI_GP:HBQ7390873.1;Name=HBQ7390873.1;gbkey=CDS;gene=wcaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=L8R42_002810;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=HBQ7390873.1;transl_table=11 DAFVNP010000047.1 tpg gene 3438 3926 . - . ID=gene-L8R42_002811;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=L8R42_002811 DAFVNP010000047.1 Protein Homology CDS 3438 3926 . - 0 ID=cds-HBQ7390874.1;Parent=gene-L8R42_002811;Dbxref=NCBI_GP:HBQ7390874.1;Name=HBQ7390874.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=L8R42_002811;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=HBQ7390874.1;transl_table=11 DAFVNP010000047.1 tpg gene 3929 4771 . - . ID=gene-L8R42_002812;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=L8R42_002812 DAFVNP010000047.1 Protein Homology CDS 3929 4771 . - 0 ID=cds-HBQ7390875.1;Parent=gene-L8R42_002812;Dbxref=NCBI_GP:HBQ7390875.1;Name=HBQ7390875.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=L8R42_002812;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=HBQ7390875.1;transl_table=11 DAFVNP010000047.1 tpg gene 4858 7017 . - . ID=gene-L8R42_002813;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=L8R42_002813 DAFVNP010000047.1 Protein Homology CDS 4858 7017 . - 0 ID=cds-HBQ7390876.1;Parent=gene-L8R42_002813;Dbxref=NCBI_GP:HBQ7390876.1;Name=HBQ7390876.1;gbkey=CDS;gene=wzc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=L8R42_002813;product=tyrosine-protein kinase Wzc;protein_id=HBQ7390876.1;transl_table=11 DAFVNP010000047.1 tpg gene 7014 7463 . - . ID=gene-L8R42_002814;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=L8R42_002814 DAFVNP010000047.1 Protein Homology CDS 7014 7463 . - 0 ID=cds-HBQ7390877.1;Parent=gene-L8R42_002814;Dbxref=NCBI_GP:HBQ7390877.1;Name=HBQ7390877.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=L8R42_002814;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=HBQ7390877.1;transl_table=11 DAFVNP010000047.1 tpg gene 7469 8608 . - . ID=gene-L8R42_002815;Name=L8R42_002815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002815 DAFVNP010000047.1 Protein Homology CDS 7469 8608 . - 0 ID=cds-HBQ7390878.1;Parent=gene-L8R42_002815;Dbxref=NCBI_GP:HBQ7390878.1;Name=HBQ7390878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=L8R42_002815;product=polysaccharide export protein;protein_id=HBQ7390878.1;transl_table=11 DAFVNP010000047.1 tpg gene 9283 10863 . + . ID=gene-L8R42_002816;Name=L8R42_002816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002816 DAFVNP010000047.1 Protein Homology CDS 9283 10863 . + 0 ID=cds-HBQ7390879.1;Parent=gene-L8R42_002816;Dbxref=NCBI_GP:HBQ7390879.1;Name=HBQ7390879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=L8R42_002816;product=TerC family protein;protein_id=HBQ7390879.1;transl_table=11 DAFVNP010000047.1 tpg gene 10949 12805 . - . ID=gene-L8R42_002817;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=L8R42_002817 DAFVNP010000047.1 Protein Homology CDS 10949 12805 . - 0 ID=cds-HBQ7390880.1;Parent=gene-L8R42_002817;Dbxref=NCBI_GP:HBQ7390880.1;Name=HBQ7390880.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=L8R42_002817;product=outer membrane assembly protein AsmA;protein_id=HBQ7390880.1;transl_table=11 DAFVNP010000047.1 tpg gene 12844 13425 . - . ID=gene-L8R42_002818;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=L8R42_002818 DAFVNP010000047.1 Protein Homology CDS 12844 13425 . - 0 ID=cds-HBQ7390881.1;Parent=gene-L8R42_002818;Dbxref=NCBI_GP:HBQ7390881.1;Name=HBQ7390881.1;gbkey=CDS;gene=dcd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=L8R42_002818;product=dCTP deaminase;protein_id=HBQ7390881.1;transl_table=11 DAFVNP010000047.1 tpg gene 13516 14157 . - . ID=gene-L8R42_002819;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=L8R42_002819 DAFVNP010000047.1 Protein Homology CDS 13516 14157 . - 0 ID=cds-HBQ7390882.1;Parent=gene-L8R42_002819;Dbxref=NCBI_GP:HBQ7390882.1;Name=HBQ7390882.1;gbkey=CDS;gene=udk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=L8R42_002819;product=uridine kinase;protein_id=HBQ7390882.1;transl_table=11 DAFVNP010000047.1 tpg gene 14488 17478 . + . ID=gene-L8R42_002820;Name=L8R42_002820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002820 DAFVNP010000047.1 Protein Homology CDS 14488 17478 . + 0 ID=cds-HBQ7390883.1;Parent=gene-L8R42_002820;Dbxref=NCBI_GP:HBQ7390883.1;Name=HBQ7390883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=L8R42_002820;product=MASE1 domain-containing protein;protein_id=HBQ7390883.1;transl_table=11 DAFVNP010000047.1 tpg gene 17446 18315 . - . ID=gene-L8R42_002821;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=L8R42_002821 DAFVNP010000047.1 Protein Homology CDS 17446 18315 . - 0 ID=cds-HBQ7390884.1;Parent=gene-L8R42_002821;Dbxref=NCBI_GP:HBQ7390884.1;Name=HBQ7390884.1;gbkey=CDS;gene=alkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=L8R42_002821;product=DNA-3-methyladenine glycosylase 2;protein_id=HBQ7390884.1;transl_table=11 DAFVNP010000047.1 tpg gene 18449 19801 . + . ID=gene-L8R42_002822;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=L8R42_002822 DAFVNP010000047.1 Protein Homology CDS 18449 19801 . + 0 ID=cds-HBQ7390885.1;Parent=gene-L8R42_002822;Dbxref=NCBI_GP:HBQ7390885.1;Name=HBQ7390885.1;gbkey=CDS;gene=yegD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=L8R42_002822;product=molecular chaperone;protein_id=HBQ7390885.1;transl_table=11 DAFVNP010000047.1 tpg gene 19897 19956 . - . ID=gene-L8R42_002823;Name=L8R42_002823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002823 DAFVNP010000047.1 Protein Homology CDS 19897 19956 . - 0 ID=cds-HBQ7390886.1;Parent=gene-L8R42_002823;Dbxref=NCBI_GP:HBQ7390886.1;Name=HBQ7390886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=L8R42_002823;product=type I toxin-antitoxin system Ibs family toxin;protein_id=HBQ7390886.1;transl_table=11 DAFVNP010000047.1 tpg gene 20239 21480 . + . ID=gene-L8R42_002824;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=L8R42_002824 DAFVNP010000047.1 Protein Homology CDS 20239 21480 . + 0 ID=cds-HBQ7390887.1;Parent=gene-L8R42_002824;Dbxref=NCBI_GP:HBQ7390887.1;Name=HBQ7390887.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=L8R42_002824;product=multidrug efflux RND transporter subunit MdtA;protein_id=HBQ7390887.1;transl_table=11 DAFVNP010000047.1 tpg gene 21480 24602 . + . ID=gene-L8R42_002825;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=L8R42_002825 DAFVNP010000047.1 Protein Homology CDS 21480 24602 . + 0 ID=cds-HBQ7390888.1;Parent=gene-L8R42_002825;Dbxref=NCBI_GP:HBQ7390888.1;Name=HBQ7390888.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=L8R42_002825;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=HBQ7390888.1;transl_table=11 DAFVNP010000047.1 tpg gene 24603 27683 . + . ID=gene-L8R42_002826;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=L8R42_002826 DAFVNP010000047.1 Protein Homology CDS 24603 27683 . + 0 ID=cds-HBQ7390889.1;Parent=gene-L8R42_002826;Dbxref=NCBI_GP:HBQ7390889.1;Name=HBQ7390889.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=L8R42_002826;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=HBQ7390889.1;transl_table=11 DAFVNP010000047.1 tpg gene 27680 29092 . + . ID=gene-L8R42_002827;Name=L8R42_002827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002827 DAFVNP010000047.1 Protein Homology CDS 27680 29092 . + 0 ID=cds-HBQ7390890.1;Parent=gene-L8R42_002827;Dbxref=NCBI_GP:HBQ7390890.1;Name=HBQ7390890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=L8R42_002827;product=MFS transporter;protein_id=HBQ7390890.1;transl_table=11 DAFVNP010000047.1 tpg gene 29092 30495 . + . ID=gene-L8R42_002828;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=L8R42_002828 DAFVNP010000047.1 Protein Homology CDS 29092 30495 . + 0 ID=cds-HBQ7390891.1;Parent=gene-L8R42_002828;Dbxref=NCBI_GP:HBQ7390891.1;Name=HBQ7390891.1;gbkey=CDS;gene=baeS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=L8R42_002828;product=two-component system sensor histidine kinase BaeS;protein_id=HBQ7390891.1;transl_table=11 DAFVNP010000047.1 tpg gene 30492 31214 . + . ID=gene-L8R42_002829;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=L8R42_002829 DAFVNP010000047.1 Protein Homology CDS 30492 31214 . + 0 ID=cds-HBQ7390892.1;Parent=gene-L8R42_002829;Dbxref=NCBI_GP:HBQ7390892.1;Name=HBQ7390892.1;gbkey=CDS;gene=baeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=L8R42_002829;product=two-component system response regulator BaeR;protein_id=HBQ7390892.1;transl_table=11 DAFVNP010000047.1 tpg gene 31483 32685 . + . ID=gene-L8R42_002830;Name=L8R42_002830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002830 DAFVNP010000047.1 Protein Homology CDS 31483 32685 . + 0 ID=cds-HBQ7390893.1;Parent=gene-L8R42_002830;Dbxref=NCBI_GP:HBQ7390893.1;Name=HBQ7390893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141079.1;locus_tag=L8R42_002830;product=PcfJ domain-containing protein;protein_id=HBQ7390893.1;transl_table=11 DAFVNP010000047.1 tpg gene 32685 33401 . + . ID=gene-L8R42_002831;Name=L8R42_002831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002831 DAFVNP010000047.1 Protein Homology CDS 32685 33401 . + 0 ID=cds-HBQ7390894.1;Parent=gene-L8R42_002831;Dbxref=NCBI_GP:HBQ7390894.1;Name=HBQ7390894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=L8R42_002831;product=DUF1266 domain-containing protein;protein_id=HBQ7390894.1;transl_table=11 DAFVNP010000047.1 tpg gene 33412 35523 . + . ID=gene-L8R42_002832;Name=L8R42_002832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002832 DAFVNP010000047.1 Protein Homology CDS 33412 35523 . + 0 ID=cds-HBQ7390895.1;Parent=gene-L8R42_002832;Dbxref=NCBI_GP:HBQ7390895.1;Name=HBQ7390895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=L8R42_002832;product=DUF4034 domain-containing protein;protein_id=HBQ7390895.1;transl_table=11 DAFVNP010000047.1 tpg gene 35528 36247 . + . ID=gene-L8R42_002833;Name=L8R42_002833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002833 DAFVNP010000047.1 Protein Homology CDS 35528 36247 . + 0 ID=cds-HBQ7390896.1;Parent=gene-L8R42_002833;Dbxref=NCBI_GP:HBQ7390896.1;Name=HBQ7390896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586683.1;locus_tag=L8R42_002833;product=tetratricopeptide repeat protein;protein_id=HBQ7390896.1;transl_table=11 ##sequence-region DAFVNP010000048.1 1 35787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000048.1 tpg region 1 35787 . + . ID=DAFVNP010000048.1:1..35787;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000048.1 tpg gene 1 1167 . - . ID=gene-L8R42_002834;Name=L8R42_002834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002834;partial=true;start_range=.,1 DAFVNP010000048.1 Protein Homology CDS 1 1167 . - 0 ID=cds-HBQ7390897.1;Parent=gene-L8R42_002834;Dbxref=NCBI_GP:HBQ7390897.1;Name=HBQ7390897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=L8R42_002834;partial=true;product=MFS transporter;protein_id=HBQ7390897.1;start_range=.,1;transl_table=11 DAFVNP010000048.1 tpg gene 1157 2665 . - . ID=gene-L8R42_002835;Name=L8R42_002835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002835 DAFVNP010000048.1 Protein Homology CDS 1157 2665 . - 0 ID=cds-HBQ7390898.1;Parent=gene-L8R42_002835;Dbxref=NCBI_GP:HBQ7390898.1;Name=HBQ7390898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=L8R42_002835;product=FAD-dependent oxidoreductase;protein_id=HBQ7390898.1;transl_table=11 DAFVNP010000048.1 tpg gene 2710 3198 . + . ID=gene-L8R42_002836;Name=L8R42_002836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002836 DAFVNP010000048.1 Protein Homology CDS 2710 3198 . + 0 ID=cds-HBQ7390899.1;Parent=gene-L8R42_002836;Dbxref=NCBI_GP:HBQ7390899.1;Name=HBQ7390899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=L8R42_002836;product=winged helix-turn-helix transcriptional regulator;protein_id=HBQ7390899.1;transl_table=11 DAFVNP010000048.1 tpg gene 3391 4470 . + . ID=gene-L8R42_002837;Name=L8R42_002837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002837 DAFVNP010000048.1 Protein Homology CDS 3391 4470 . + 0 ID=cds-HBQ7390900.1;Parent=gene-L8R42_002837;Dbxref=NCBI_GP:HBQ7390900.1;Name=HBQ7390900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=L8R42_002837;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=HBQ7390900.1;transl_table=11 DAFVNP010000048.1 tpg gene 4522 4911 . - . ID=gene-L8R42_002838;Name=L8R42_002838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002838 DAFVNP010000048.1 Protein Homology CDS 4522 4911 . - 0 ID=cds-HBQ7390901.1;Parent=gene-L8R42_002838;Dbxref=NCBI_GP:HBQ7390901.1;Name=HBQ7390901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=L8R42_002838;product=RidA family protein;protein_id=HBQ7390901.1;transl_table=11 DAFVNP010000048.1 tpg gene 5082 5366 . - . ID=gene-L8R42_002839;Name=L8R42_002839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002839 DAFVNP010000048.1 Protein Homology CDS 5082 5366 . - 0 ID=cds-HBQ7390902.1;Parent=gene-L8R42_002839;Dbxref=NCBI_GP:HBQ7390902.1;Name=HBQ7390902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=L8R42_002839;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HBQ7390902.1;transl_table=11 DAFVNP010000048.1 tpg gene 5356 5604 . - . ID=gene-L8R42_002840;Name=L8R42_002840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002840 DAFVNP010000048.1 Protein Homology CDS 5356 5604 . - 0 ID=cds-HBQ7390903.1;Parent=gene-L8R42_002840;Dbxref=NCBI_GP:HBQ7390903.1;Name=HBQ7390903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=L8R42_002840;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HBQ7390903.1;transl_table=11 DAFVNP010000048.1 tpg pseudogene 5756 5875 . + . ID=gene-L8R42_002841;Name=L8R42_002841;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002841;pseudo=true DAFVNP010000048.1 Protein Homology CDS 5756 5875 . + 0 ID=cds-L8R42_002841;Parent=gene-L8R42_002841;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=L8R42_002841;product=type II and III secretion system;pseudo=true;transl_table=11 DAFVNP010000048.1 tpg pseudogene 5961 6292 . + . ID=gene-L8R42_002842;Name=L8R42_002842;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_002842;pseudo=true DAFVNP010000048.1 Protein Homology CDS 5961 6292 . + 0 ID=cds-L8R42_002842;Parent=gene-L8R42_002842;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=L8R42_002842;product=DUF1493 family protein;pseudo=true;transl_table=11 DAFVNP010000048.1 tpg gene 6565 7473 . + . ID=gene-L8R42_002843;Name=L8R42_002843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002843 DAFVNP010000048.1 Protein Homology CDS 6565 7473 . + 0 ID=cds-HBQ7390904.1;Parent=gene-L8R42_002843;Dbxref=NCBI_GP:HBQ7390904.1;Name=HBQ7390904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460512.1;locus_tag=L8R42_002843;product=hypothetical protein;protein_id=HBQ7390904.1;transl_table=11 DAFVNP010000048.1 tpg gene 8580 8768 . - . ID=gene-L8R42_002844;Name=L8R42_002844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002844 DAFVNP010000048.1 Protein Homology CDS 8580 8768 . - 0 ID=cds-HBQ7390905.1;Parent=gene-L8R42_002844;Dbxref=NCBI_GP:HBQ7390905.1;Name=HBQ7390905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276020.1;locus_tag=L8R42_002844;product=DUF29 family protein;protein_id=HBQ7390905.1;transl_table=11 DAFVNP010000048.1 tpg gene 9170 10078 . + . ID=gene-L8R42_002845;Name=L8R42_002845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002845 DAFVNP010000048.1 Protein Homology CDS 9170 10078 . + 0 ID=cds-HBQ7390906.1;Parent=gene-L8R42_002845;Dbxref=NCBI_GP:HBQ7390906.1;Name=HBQ7390906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=L8R42_002845;product=LysR family transcriptional regulator;protein_id=HBQ7390906.1;transl_table=11 DAFVNP010000048.1 tpg gene 10252 11232 . + . ID=gene-L8R42_002846;Name=L8R42_002846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002846 DAFVNP010000048.1 Protein Homology CDS 10252 11232 . + 0 ID=cds-HBQ7390907.1;Parent=gene-L8R42_002846;Dbxref=NCBI_GP:HBQ7390907.1;Name=HBQ7390907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=L8R42_002846;product=nitronate monooxygenase;protein_id=HBQ7390907.1;transl_table=11 DAFVNP010000048.1 tpg gene 11487 12953 . - . ID=gene-L8R42_002847;Name=L8R42_002847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002847 DAFVNP010000048.1 Protein Homology CDS 11487 12953 . - 0 ID=cds-HBQ7390908.1;Parent=gene-L8R42_002847;Dbxref=NCBI_GP:HBQ7390908.1;Name=HBQ7390908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=L8R42_002847;product=hypothetical protein;protein_id=HBQ7390908.1;transl_table=11 DAFVNP010000048.1 tpg gene 13211 14218 . + . ID=gene-L8R42_002848;Name=L8R42_002848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002848 DAFVNP010000048.1 Protein Homology CDS 13211 14218 . + 0 ID=cds-HBQ7390909.1;Parent=gene-L8R42_002848;Dbxref=NCBI_GP:HBQ7390909.1;Name=HBQ7390909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=L8R42_002848;product=LacI family DNA-binding transcriptional regulator;protein_id=HBQ7390909.1;transl_table=11 DAFVNP010000048.1 tpg gene 14362 15813 . + . ID=gene-L8R42_002849;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=L8R42_002849 DAFVNP010000048.1 Protein Homology CDS 14362 15813 . + 0 ID=cds-HBQ7390910.1;Parent=gene-L8R42_002849;Dbxref=NCBI_GP:HBQ7390910.1;Name=HBQ7390910.1;gbkey=CDS;gene=nhaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=L8R42_002849;product=Na+/H+ antiporter NhaC;protein_id=HBQ7390910.1;transl_table=11 DAFVNP010000048.1 tpg gene 15826 17028 . + . ID=gene-L8R42_002850;Name=L8R42_002850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002850 DAFVNP010000048.1 Protein Homology CDS 15826 17028 . + 0 ID=cds-HBQ7390911.1;Parent=gene-L8R42_002850;Dbxref=NCBI_GP:HBQ7390911.1;Name=HBQ7390911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=L8R42_002850;product=pyridoxal phosphate-dependent aminotransferase;protein_id=HBQ7390911.1;transl_table=11 DAFVNP010000048.1 tpg gene 17142 19217 . - . ID=gene-L8R42_002851;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=L8R42_002851 DAFVNP010000048.1 Protein Homology CDS 17142 19217 . - 0 ID=cds-HBQ7390912.1;Parent=gene-L8R42_002851;Dbxref=NCBI_GP:HBQ7390912.1;Name=HBQ7390912.1;gbkey=CDS;gene=glgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=L8R42_002851;product=glycogen debranching protein GlgX;protein_id=HBQ7390912.1;transl_table=11 DAFVNP010000048.1 tpg gene 19274 21802 . - . ID=gene-L8R42_002852;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=L8R42_002852 DAFVNP010000048.1 Protein Homology CDS 19274 21802 . - 0 ID=cds-HBQ7390913.1;Parent=gene-L8R42_002852;Dbxref=NCBI_GP:HBQ7390913.1;Name=HBQ7390913.1;gbkey=CDS;gene=treY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=L8R42_002852;product=malto-oligosyltrehalose synthase;protein_id=HBQ7390913.1;transl_table=11 DAFVNP010000048.1 tpg gene 21799 23583 . - . ID=gene-L8R42_002853;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=L8R42_002853 DAFVNP010000048.1 Protein Homology CDS 21799 23583 . - 0 ID=cds-HBQ7390914.1;Parent=gene-L8R42_002853;Dbxref=NCBI_GP:HBQ7390914.1;Name=HBQ7390914.1;gbkey=CDS;gene=treZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=L8R42_002853;product=malto-oligosyltrehalose trehalohydrolase;protein_id=HBQ7390914.1;transl_table=11 DAFVNP010000048.1 tpg gene 23712 24497 . - . ID=gene-L8R42_002854;Name=L8R42_002854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002854 DAFVNP010000048.1 Protein Homology CDS 23712 24497 . - 0 ID=cds-HBQ7390915.1;Parent=gene-L8R42_002854;Dbxref=NCBI_GP:HBQ7390915.1;Name=HBQ7390915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=L8R42_002854;product=OBAP family protein;protein_id=HBQ7390915.1;transl_table=11 DAFVNP010000048.1 tpg gene 24640 24969 . - . ID=gene-L8R42_002855;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=L8R42_002855 DAFVNP010000048.1 Protein Homology CDS 24640 24969 . - 0 ID=cds-HBQ7390916.1;Parent=gene-L8R42_002855;Dbxref=NCBI_GP:HBQ7390916.1;Name=HBQ7390916.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=L8R42_002855;product=acid-activated periplasmic chaperone HdeB;protein_id=HBQ7390916.1;transl_table=11 DAFVNP010000048.1 tpg gene 25321 25752 . - . ID=gene-L8R42_002856;Name=L8R42_002856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002856 DAFVNP010000048.1 Protein Homology CDS 25321 25752 . - 0 ID=cds-HBQ7390917.1;Parent=gene-L8R42_002856;Dbxref=NCBI_GP:HBQ7390917.1;Name=HBQ7390917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=L8R42_002856;product=OsmC family protein;protein_id=HBQ7390917.1;transl_table=11 DAFVNP010000048.1 tpg gene 26264 26479 . + . ID=gene-L8R42_002857;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=L8R42_002857 DAFVNP010000048.1 Protein Homology CDS 26264 26479 . + 0 ID=cds-HBQ7390918.1;Parent=gene-L8R42_002857;Dbxref=NCBI_GP:HBQ7390918.1;Name=HBQ7390918.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=L8R42_002857;product=biofilm-dependent modulation protein;protein_id=HBQ7390918.1;transl_table=11 DAFVNP010000048.1 tpg gene 26574 26717 . + . ID=gene-L8R42_002858;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=L8R42_002858 DAFVNP010000048.1 Protein Homology CDS 26574 26717 . + 0 ID=cds-HBQ7390919.1;Parent=gene-L8R42_002858;Dbxref=NCBI_GP:HBQ7390919.1;Name=HBQ7390919.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=L8R42_002858;product=stationary-phase-induced ribosome-associated protein;protein_id=HBQ7390919.1;transl_table=11 DAFVNP010000048.1 tpg gene 26894 28591 . + . ID=gene-L8R42_002859;Name=L8R42_002859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002859 DAFVNP010000048.1 Protein Homology CDS 26894 28591 . + 0 ID=cds-HBQ7390920.1;Parent=gene-L8R42_002859;Dbxref=NCBI_GP:HBQ7390920.1;Name=HBQ7390920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=L8R42_002859;product=NAD-dependent malic enzyme;protein_id=HBQ7390920.1;transl_table=11 DAFVNP010000048.1 tpg gene 28877 29887 . + . ID=gene-L8R42_002860;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=L8R42_002860 DAFVNP010000048.1 Protein Homology CDS 28877 29887 . + 0 ID=cds-HBQ7390921.1;Parent=gene-L8R42_002860;Dbxref=NCBI_GP:HBQ7390921.1;Name=HBQ7390921.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=L8R42_002860;product=alcohol dehydrogenase AdhP;protein_id=HBQ7390921.1;transl_table=11 DAFVNP010000048.1 tpg gene 29978 30634 . - . ID=gene-L8R42_002861;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=L8R42_002861 DAFVNP010000048.1 Protein Homology CDS 29978 30634 . - 0 ID=cds-HBQ7390922.1;Parent=gene-L8R42_002861;Dbxref=NCBI_GP:HBQ7390922.1;Name=HBQ7390922.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=L8R42_002861;product=formate dehydrogenase-N subunit gamma;protein_id=HBQ7390922.1;transl_table=11 DAFVNP010000048.1 tpg gene 30627 31511 . - . ID=gene-L8R42_002862;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=L8R42_002862 DAFVNP010000048.1 Protein Homology CDS 30627 31511 . - 0 ID=cds-HBQ7390923.1;Parent=gene-L8R42_002862;Dbxref=NCBI_GP:HBQ7390923.1;Name=HBQ7390923.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=L8R42_002862;product=formate dehydrogenase subunit beta;protein_id=HBQ7390923.1;transl_table=11 DAFVNP010000048.1 tpg gene 31525 34572 . - . ID=gene-L8R42_002863;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=L8R42_002863 DAFVNP010000048.1 Protein Homology CDS 31525 34572 . - 0 ID=cds-HBQ7390924.1;Parent=gene-L8R42_002863;Dbxref=NCBI_GP:HBQ7390924.1;Name=HBQ7390924.1;gbkey=CDS;gene=fdnG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=L8R42_002863;product=formate dehydrogenase-N subunit alpha;protein_id=HBQ7390924.1;transl_except=(pos:complement(33985..33987)%2Caa:Sec);transl_table=11 DAFVNP010000048.1 tpg gene 34850 35731 . + . ID=gene-L8R42_002864;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=L8R42_002864 DAFVNP010000048.1 Protein Homology CDS 34850 35731 . + 0 ID=cds-HBQ7390925.1;Parent=gene-L8R42_002864;Dbxref=NCBI_GP:HBQ7390925.1;Name=HBQ7390925.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=L8R42_002864;product=aromatic amino acid efflux DMT transporter YddG;protein_id=HBQ7390925.1;transl_table=11 ##sequence-region DAFVNP010000049.1 1 35340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000049.1 tpg region 1 35340 . + . ID=DAFVNP010000049.1:1..35340;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000049.1 tpg gene 208 1968 . - . ID=gene-L8R42_002865;Name=L8R42_002865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002865 DAFVNP010000049.1 Protein Homology CDS 208 1968 . - 0 ID=cds-HBQ7390926.1;Parent=gene-L8R42_002865;Dbxref=NCBI_GP:HBQ7390926.1;Name=HBQ7390926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=L8R42_002865;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=HBQ7390926.1;transl_table=11 DAFVNP010000049.1 tpg gene 2105 2797 . + . ID=gene-L8R42_002866;Name=L8R42_002866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002866 DAFVNP010000049.1 Protein Homology CDS 2105 2797 . + 0 ID=cds-HBQ7390927.1;Parent=gene-L8R42_002866;Dbxref=NCBI_GP:HBQ7390927.1;Name=HBQ7390927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=L8R42_002866;product=DUF421 domain-containing protein;protein_id=HBQ7390927.1;transl_table=11 DAFVNP010000049.1 tpg gene 2983 4071 . + . ID=gene-L8R42_002867;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=L8R42_002867 DAFVNP010000049.1 Protein Homology CDS 2983 4071 . + 0 ID=cds-HBQ7390928.1;Parent=gene-L8R42_002867;Dbxref=NCBI_GP:HBQ7390928.1;Name=HBQ7390928.1;gbkey=CDS;gene=serC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=L8R42_002867;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=HBQ7390928.1;transl_table=11 DAFVNP010000049.1 tpg gene 4142 5425 . + . ID=gene-L8R42_002868;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=L8R42_002868 DAFVNP010000049.1 Protein Homology CDS 4142 5425 . + 0 ID=cds-HBQ7390929.1;Parent=gene-L8R42_002868;Dbxref=NCBI_GP:HBQ7390929.1;Name=HBQ7390929.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=L8R42_002868;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=HBQ7390929.1;transl_table=11 DAFVNP010000049.1 tpg gene 5569 6330 . + . ID=gene-L8R42_002869;Name=L8R42_002869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002869 DAFVNP010000049.1 Protein Homology CDS 5569 6330 . + 0 ID=cds-HBQ7390930.1;Parent=gene-L8R42_002869;Dbxref=NCBI_GP:HBQ7390930.1;Name=HBQ7390930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=L8R42_002869;product=M48 family metallopeptidase;protein_id=HBQ7390930.1;transl_table=11 DAFVNP010000049.1 tpg gene 6503 7186 . + . ID=gene-L8R42_002870;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=L8R42_002870 DAFVNP010000049.1 Protein Homology CDS 6503 7186 . + 0 ID=cds-HBQ7390931.1;Parent=gene-L8R42_002870;Dbxref=NCBI_GP:HBQ7390931.1;Name=HBQ7390931.1;gbkey=CDS;gene=cmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=L8R42_002870;product=(d)CMP kinase;protein_id=HBQ7390931.1;transl_table=11 DAFVNP010000049.1 tpg gene 7300 8973 . + . ID=gene-L8R42_002871;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=L8R42_002871 DAFVNP010000049.1 Protein Homology CDS 7300 8973 . + 0 ID=cds-HBQ7390932.1;Parent=gene-L8R42_002871;Dbxref=NCBI_GP:HBQ7390932.1;Name=HBQ7390932.1;gbkey=CDS;gene=rpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=L8R42_002871;product=30S ribosomal protein S1;protein_id=HBQ7390932.1;transl_table=11 DAFVNP010000049.1 tpg gene 9129 9413 . + . ID=gene-L8R42_002872;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=L8R42_002872 DAFVNP010000049.1 Protein Homology CDS 9129 9413 . + 0 ID=cds-HBQ7390933.1;Parent=gene-L8R42_002872;Dbxref=NCBI_GP:HBQ7390933.1;Name=HBQ7390933.1;gbkey=CDS;gene=ihfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=L8R42_002872;product=integration host factor subunit beta;protein_id=HBQ7390933.1;transl_table=11 DAFVNP010000049.1 tpg gene 9643 11907 . + . ID=gene-L8R42_002873;Name=L8R42_002873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002873 DAFVNP010000049.1 Protein Homology CDS 9643 11907 . + 0 ID=cds-HBQ7390934.1;Parent=gene-L8R42_002873;Dbxref=NCBI_GP:HBQ7390934.1;Name=HBQ7390934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=L8R42_002873;product=ComEC family protein;protein_id=HBQ7390934.1;transl_table=11 DAFVNP010000049.1 tpg gene 11944 13692 . + . ID=gene-L8R42_002874;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=L8R42_002874 DAFVNP010000049.1 Protein Homology CDS 11944 13692 . + 0 ID=cds-HBQ7390935.1;Parent=gene-L8R42_002874;Dbxref=NCBI_GP:HBQ7390935.1;Name=HBQ7390935.1;gbkey=CDS;gene=msbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=L8R42_002874;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=HBQ7390935.1;transl_table=11 DAFVNP010000049.1 tpg gene 13689 14666 . + . ID=gene-L8R42_002875;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=L8R42_002875 DAFVNP010000049.1 Protein Homology CDS 13689 14666 . + 0 ID=cds-HBQ7390936.1;Parent=gene-L8R42_002875;Dbxref=NCBI_GP:HBQ7390936.1;Name=HBQ7390936.1;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=L8R42_002875;product=tetraacyldisaccharide 4'-kinase;protein_id=HBQ7390936.1;transl_table=11 DAFVNP010000049.1 tpg gene 14710 15942 . + . ID=gene-L8R42_002876;Name=L8R42_002876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002876 DAFVNP010000049.1 Protein Homology CDS 14710 15942 . + 0 ID=cds-HBQ7390937.1;Parent=gene-L8R42_002876;Dbxref=NCBI_GP:HBQ7390937.1;Name=HBQ7390937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=L8R42_002876;product=YcaQ family DNA glycosylase;protein_id=HBQ7390937.1;transl_table=11 DAFVNP010000049.1 tpg gene 15994 16176 . + . ID=gene-L8R42_002877;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=L8R42_002877 DAFVNP010000049.1 Protein Homology CDS 15994 16176 . + 0 ID=cds-HBQ7390938.1;Parent=gene-L8R42_002877;Dbxref=NCBI_GP:HBQ7390938.1;Name=HBQ7390938.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=L8R42_002877;product=protein YcaR;protein_id=HBQ7390938.1;transl_table=11 DAFVNP010000049.1 tpg gene 16173 16919 . + . ID=gene-L8R42_002878;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=L8R42_002878 DAFVNP010000049.1 Protein Homology CDS 16173 16919 . + 0 ID=cds-HBQ7390939.1;Parent=gene-L8R42_002878;Dbxref=NCBI_GP:HBQ7390939.1;Name=HBQ7390939.1;gbkey=CDS;gene=kdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=L8R42_002878;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=HBQ7390939.1;transl_table=11 DAFVNP010000049.1 tpg gene 17130 18023 . + . ID=gene-L8R42_002879;Name=L8R42_002879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002879 DAFVNP010000049.1 Protein Homology CDS 17130 18023 . + 0 ID=cds-HBQ7390940.1;Parent=gene-L8R42_002879;Dbxref=NCBI_GP:HBQ7390940.1;Name=HBQ7390940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=L8R42_002879;product=YcbJ family phosphotransferase;protein_id=HBQ7390940.1;transl_table=11 DAFVNP010000049.1 tpg gene 18003 18779 . - . ID=gene-L8R42_002880;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=L8R42_002880 DAFVNP010000049.1 Protein Homology CDS 18003 18779 . - 0 ID=cds-HBQ7390941.1;Parent=gene-L8R42_002880;Dbxref=NCBI_GP:HBQ7390941.1;Name=HBQ7390941.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=L8R42_002880;product=envelope biogenesis factor ElyC;protein_id=HBQ7390941.1;transl_table=11 DAFVNP010000049.1 tpg gene 18915 19718 . + . ID=gene-L8R42_002881;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=L8R42_002881 DAFVNP010000049.1 Protein Homology CDS 18915 19718 . + 0 ID=cds-HBQ7390942.1;Parent=gene-L8R42_002881;Dbxref=NCBI_GP:HBQ7390942.1;Name=HBQ7390942.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=L8R42_002881;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=HBQ7390942.1;transl_table=11 DAFVNP010000049.1 tpg gene 19711 21033 . + . ID=gene-L8R42_002882;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=L8R42_002882 DAFVNP010000049.1 Protein Homology CDS 19711 21033 . + 0 ID=cds-HBQ7390943.1;Parent=gene-L8R42_002882;Dbxref=NCBI_GP:HBQ7390943.1;Name=HBQ7390943.1;gbkey=CDS;gene=mukF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=L8R42_002882;product=chromosome partition protein MukF;protein_id=HBQ7390943.1;transl_table=11 DAFVNP010000049.1 tpg gene 21014 21718 . + . ID=gene-L8R42_002883;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=L8R42_002883 DAFVNP010000049.1 Protein Homology CDS 21014 21718 . + 0 ID=cds-HBQ7390944.1;Parent=gene-L8R42_002883;Dbxref=NCBI_GP:HBQ7390944.1;Name=HBQ7390944.1;gbkey=CDS;gene=mukE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=L8R42_002883;product=chromosome partition protein MukE;protein_id=HBQ7390944.1;transl_table=11 DAFVNP010000049.1 tpg gene 21718 26184 . + . ID=gene-L8R42_002884;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=L8R42_002884 DAFVNP010000049.1 Protein Homology CDS 21718 26184 . + 0 ID=cds-HBQ7390945.1;Parent=gene-L8R42_002884;Dbxref=NCBI_GP:HBQ7390945.1;Name=HBQ7390945.1;gbkey=CDS;gene=mukB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=L8R42_002884;product=chromosome partition protein MukB;protein_id=HBQ7390945.1;transl_table=11 DAFVNP010000049.1 tpg gene 26529 28376 . + . ID=gene-L8R42_002885;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=L8R42_002885 DAFVNP010000049.1 Protein Homology CDS 26529 28376 . + 0 ID=cds-HBQ7390946.1;Parent=gene-L8R42_002885;Dbxref=NCBI_GP:HBQ7390946.1;Name=HBQ7390946.1;gbkey=CDS;gene=ldtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=L8R42_002885;product=L%2CD-transpeptidase;protein_id=HBQ7390946.1;transl_table=11 DAFVNP010000049.1 tpg gene 28636 29184 . + . ID=gene-L8R42_002886;Name=L8R42_002886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002886 DAFVNP010000049.1 Protein Homology CDS 28636 29184 . + 0 ID=cds-HBQ7390947.1;Parent=gene-L8R42_002886;Dbxref=NCBI_GP:HBQ7390947.1;Name=HBQ7390947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=L8R42_002886;product=YcbK family protein;protein_id=HBQ7390947.1;transl_table=11 DAFVNP010000049.1 tpg gene 29212 29859 . + . ID=gene-L8R42_002887;Name=L8R42_002887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002887 DAFVNP010000049.1 Protein Homology CDS 29212 29859 . + 0 ID=cds-HBQ7390948.1;Parent=gene-L8R42_002887;Dbxref=NCBI_GP:HBQ7390948.1;Name=HBQ7390948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=L8R42_002887;product=MBL fold metallo-hydrolase;protein_id=HBQ7390948.1;transl_table=11 DAFVNP010000049.1 tpg gene 29921 31111 . - . ID=gene-L8R42_002888;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=L8R42_002888 DAFVNP010000049.1 Protein Homology CDS 29921 31111 . - 0 ID=cds-HBQ7390949.1;Parent=gene-L8R42_002888;Dbxref=NCBI_GP:HBQ7390949.1;Name=HBQ7390949.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=L8R42_002888;product=aspartate transaminase;protein_id=HBQ7390949.1;transl_table=11 DAFVNP010000049.1 tpg gene 31296 32387 . - . ID=gene-L8R42_002889;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=L8R42_002889 DAFVNP010000049.1 Protein Homology CDS 31296 32387 . - 0 ID=cds-HBQ7390950.1;Parent=gene-L8R42_002889;Dbxref=NCBI_GP:HBQ7390950.1;Name=HBQ7390950.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=L8R42_002889;product=porin OmpF;protein_id=HBQ7390950.1;transl_table=11 DAFVNP010000049.1 tpg gene 32994 34394 . - . ID=gene-L8R42_002890;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=L8R42_002890 DAFVNP010000049.1 Protein Homology CDS 32994 34394 . - 0 ID=cds-HBQ7390951.1;Parent=gene-L8R42_002890;Dbxref=NCBI_GP:HBQ7390951.1;Name=HBQ7390951.1;gbkey=CDS;gene=asnS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=L8R42_002890;product=asparagine--tRNA ligase;protein_id=HBQ7390951.1;transl_table=11 DAFVNP010000049.1 tpg gene 34595 35056 . - . ID=gene-L8R42_002891;Name=L8R42_002891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002891 DAFVNP010000049.1 Protein Homology CDS 34595 35056 . - 0 ID=cds-HBQ7390952.1;Parent=gene-L8R42_002891;Dbxref=NCBI_GP:HBQ7390952.1;Name=HBQ7390952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=L8R42_002891;product=Lrp/AsnC family transcriptional regulator;protein_id=HBQ7390952.1;transl_table=11 ##sequence-region DAFVNP010000050.1 1 34968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000050.1 tpg region 1 34968 . + . ID=DAFVNP010000050.1:1..34968;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000050.1 tpg gene 146 2359 . + . ID=gene-L8R42_002892;Name=L8R42_002892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002892 DAFVNP010000050.1 Protein Homology CDS 146 2359 . + 0 ID=cds-HBQ7390953.1;Parent=gene-L8R42_002892;Dbxref=NCBI_GP:HBQ7390953.1;Name=HBQ7390953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=L8R42_002892;product=sensor domain-containing phosphodiesterase;protein_id=HBQ7390953.1;transl_table=11 DAFVNP010000050.1 tpg gene 2395 3936 . - . ID=gene-L8R42_002893;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=L8R42_002893 DAFVNP010000050.1 Protein Homology CDS 2395 3936 . - 0 ID=cds-HBQ7390954.1;Parent=gene-L8R42_002893;Dbxref=NCBI_GP:HBQ7390954.1;Name=HBQ7390954.1;gbkey=CDS;gene=ppx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=L8R42_002893;product=exopolyphosphatase;protein_id=HBQ7390954.1;transl_table=11 DAFVNP010000050.1 tpg gene 3941 6007 . - . ID=gene-L8R42_002894;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=L8R42_002894 DAFVNP010000050.1 Protein Homology CDS 3941 6007 . - 0 ID=cds-HBQ7390955.1;Parent=gene-L8R42_002894;Dbxref=NCBI_GP:HBQ7390955.1;Name=HBQ7390955.1;gbkey=CDS;gene=ppk1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=L8R42_002894;product=polyphosphate kinase 1;protein_id=HBQ7390955.1;transl_table=11 DAFVNP010000050.1 tpg gene 6196 6834 . - . ID=gene-L8R42_002895;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=L8R42_002895 DAFVNP010000050.1 Protein Homology CDS 6196 6834 . - 0 ID=cds-HBQ7390956.1;Parent=gene-L8R42_002895;Dbxref=NCBI_GP:HBQ7390956.1;Name=HBQ7390956.1;gbkey=CDS;gene=purN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=L8R42_002895;product=phosphoribosylglycinamide formyltransferase;protein_id=HBQ7390956.1;transl_table=11 DAFVNP010000050.1 tpg gene 6834 7871 . - . ID=gene-L8R42_002896;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=L8R42_002896 DAFVNP010000050.1 Protein Homology CDS 6834 7871 . - 0 ID=cds-HBQ7390957.1;Parent=gene-L8R42_002896;Dbxref=NCBI_GP:HBQ7390957.1;Name=HBQ7390957.1;gbkey=CDS;gene=purM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=L8R42_002896;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=HBQ7390957.1;transl_table=11 DAFVNP010000050.1 tpg gene 8286 8912 . + . ID=gene-L8R42_002897;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=L8R42_002897 DAFVNP010000050.1 Protein Homology CDS 8286 8912 . + 0 ID=cds-HBQ7390958.1;Parent=gene-L8R42_002897;Dbxref=NCBI_GP:HBQ7390958.1;Name=HBQ7390958.1;gbkey=CDS;gene=upp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=L8R42_002897;product=uracil phosphoribosyltransferase;protein_id=HBQ7390958.1;transl_table=11 DAFVNP010000050.1 tpg gene 9000 10289 . + . ID=gene-L8R42_002898;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=L8R42_002898 DAFVNP010000050.1 Protein Homology CDS 9000 10289 . + 0 ID=cds-HBQ7390959.1;Parent=gene-L8R42_002898;Dbxref=NCBI_GP:HBQ7390959.1;Name=HBQ7390959.1;gbkey=CDS;gene=uraA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=L8R42_002898;product=uracil permease;protein_id=HBQ7390959.1;transl_table=11 DAFVNP010000050.1 tpg gene 10360 11085 . + . ID=gene-L8R42_002899;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=L8R42_002899 DAFVNP010000050.1 Protein Homology CDS 10360 11085 . + 0 ID=cds-HBQ7390960.1;Parent=gene-L8R42_002899;Dbxref=NCBI_GP:HBQ7390960.1;Name=HBQ7390960.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461431.1;locus_tag=L8R42_002899;product=DnaA inactivator Hda;protein_id=HBQ7390960.1;transl_table=11 DAFVNP010000050.1 tpg gene 11112 11471 . - . ID=gene-L8R42_002900;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=L8R42_002900 DAFVNP010000050.1 Protein Homology CDS 11112 11471 . - 0 ID=cds-HBQ7390961.1;Parent=gene-L8R42_002900;Dbxref=NCBI_GP:HBQ7390961.1;Name=HBQ7390961.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=L8R42_002900;product=arsenate reductase (glutaredoxin);protein_id=HBQ7390961.1;transl_table=11 DAFVNP010000050.1 tpg gene 11511 12974 . - . ID=gene-L8R42_002901;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=L8R42_002901 DAFVNP010000050.1 Protein Homology CDS 11511 12974 . - 0 ID=cds-HBQ7390962.1;Parent=gene-L8R42_002901;Dbxref=NCBI_GP:HBQ7390962.1;Name=HBQ7390962.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=L8R42_002901;product=beta-barrel assembly-enhancing protease;protein_id=HBQ7390962.1;transl_table=11 DAFVNP010000050.1 tpg gene 13182 14249 . + . ID=gene-L8R42_002902;Name=L8R42_002902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002902 DAFVNP010000050.1 Protein Homology CDS 13182 14249 . + 0 ID=cds-HBQ7390963.1;Parent=gene-L8R42_002902;Dbxref=NCBI_GP:HBQ7390963.1;Name=HBQ7390963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=L8R42_002902;product=AI-2E family transporter;protein_id=HBQ7390963.1;transl_table=11 DAFVNP010000050.1 tpg gene 14526 15713 . + . ID=gene-L8R42_002903;Name=L8R42_002903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002903 DAFVNP010000050.1 Protein Homology CDS 14526 15713 . + 0 ID=cds-HBQ7390964.1;Parent=gene-L8R42_002903;Dbxref=NCBI_GP:HBQ7390964.1;Name=HBQ7390964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=L8R42_002903;product=helix-turn-helix domain-containing protein;protein_id=HBQ7390964.1;transl_table=11 DAFVNP010000050.1 tpg gene 15781 17049 . + . ID=gene-L8R42_002904;Name=L8R42_002904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002904 DAFVNP010000050.1 Protein Homology CDS 15781 17049 . + 0 ID=cds-HBQ7390965.1;Parent=gene-L8R42_002904;Dbxref=NCBI_GP:HBQ7390965.1;Name=HBQ7390965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=L8R42_002904;product=GntP family permease;protein_id=HBQ7390965.1;transl_table=11 DAFVNP010000050.1 tpg gene 17055 18194 . + . ID=gene-L8R42_002905;Name=L8R42_002905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002905 DAFVNP010000050.1 Protein Homology CDS 17055 18194 . + 0 ID=cds-HBQ7390966.1;Parent=gene-L8R42_002905;Dbxref=NCBI_GP:HBQ7390966.1;Name=HBQ7390966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=L8R42_002905;product=glycerate kinase;protein_id=HBQ7390966.1;transl_table=11 DAFVNP010000050.1 tpg gene 18241 18711 . - . ID=gene-L8R42_002906;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=L8R42_002906 DAFVNP010000050.1 Protein Homology CDS 18241 18711 . - 0 ID=cds-HBQ7390967.1;Parent=gene-L8R42_002906;Dbxref=NCBI_GP:HBQ7390967.1;Name=HBQ7390967.1;gbkey=CDS;gene=bcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=L8R42_002906;product=thioredoxin-dependent thiol peroxidase;protein_id=HBQ7390967.1;transl_table=11 DAFVNP010000050.1 tpg gene 18711 19283 . - . ID=gene-L8R42_002907;Name=L8R42_002907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002907 DAFVNP010000050.1 Protein Homology CDS 18711 19283 . - 0 ID=cds-HBQ7390968.1;Parent=gene-L8R42_002907;Dbxref=NCBI_GP:HBQ7390968.1;Name=HBQ7390968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=L8R42_002907;product=glycine cleavage system transcriptional repressor;protein_id=HBQ7390968.1;transl_table=11 DAFVNP010000050.1 tpg gene 19429 20307 . + . ID=gene-L8R42_002908;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=L8R42_002908 DAFVNP010000050.1 Protein Homology CDS 19429 20307 . + 0 ID=cds-HBQ7390969.1;Parent=gene-L8R42_002908;Dbxref=NCBI_GP:HBQ7390969.1;Name=HBQ7390969.1;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=L8R42_002908;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=HBQ7390969.1;transl_table=11 DAFVNP010000050.1 tpg gene 20324 21358 . + . ID=gene-L8R42_002909;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=L8R42_002909 DAFVNP010000050.1 Protein Homology CDS 20324 21358 . + 0 ID=cds-HBQ7390970.1;Parent=gene-L8R42_002909;Dbxref=NCBI_GP:HBQ7390970.1;Name=HBQ7390970.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=L8R42_002909;product=outer membrane protein assembly factor BamC;protein_id=HBQ7390970.1;transl_table=11 DAFVNP010000050.1 tpg gene 21533 22246 . + . ID=gene-L8R42_002910;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=L8R42_002910 DAFVNP010000050.1 Protein Homology CDS 21533 22246 . + 0 ID=cds-HBQ7390971.1;Parent=gene-L8R42_002910;Dbxref=NCBI_GP:HBQ7390971.1;Name=HBQ7390971.1;gbkey=CDS;gene=purC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=L8R42_002910;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=HBQ7390971.1;transl_table=11 DAFVNP010000050.1 tpg gene 22377 23240 . + . ID=gene-L8R42_002911;Name=L8R42_002911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002911 DAFVNP010000050.1 Protein Homology CDS 22377 23240 . + 0 ID=cds-HBQ7390972.1;Parent=gene-L8R42_002911;Dbxref=NCBI_GP:HBQ7390972.1;Name=HBQ7390972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=L8R42_002911;product=neutral zinc metallopeptidase;protein_id=HBQ7390972.1;transl_table=11 DAFVNP010000050.1 tpg gene 23256 25274 . + . ID=gene-L8R42_002912;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=L8R42_002912 DAFVNP010000050.1 Protein Homology CDS 23256 25274 . + 0 ID=cds-HBQ7390973.1;Parent=gene-L8R42_002912;Dbxref=NCBI_GP:HBQ7390973.1;Name=HBQ7390973.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=L8R42_002912;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=HBQ7390973.1;transl_table=11 DAFVNP010000050.1 tpg gene 25301 25501 . - . ID=gene-L8R42_002913;Name=L8R42_002913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002913 DAFVNP010000050.1 Protein Homology CDS 25301 25501 . - 0 ID=cds-HBQ7390974.1;Parent=gene-L8R42_002913;Dbxref=NCBI_GP:HBQ7390974.1;Name=HBQ7390974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=L8R42_002913;product=YpfN family protein;protein_id=HBQ7390974.1;transl_table=11 DAFVNP010000050.1 tpg gene 25529 26656 . - . ID=gene-L8R42_002914;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=L8R42_002914 DAFVNP010000050.1 Protein Homology CDS 25529 26656 . - 0 ID=cds-HBQ7390975.1;Parent=gene-L8R42_002914;Dbxref=NCBI_GP:HBQ7390975.1;Name=HBQ7390975.1;gbkey=CDS;gene=dapE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=L8R42_002914;product=succinyl-diaminopimelate desuccinylase;protein_id=HBQ7390975.1;transl_table=11 DAFVNP010000050.1 tpg gene 26660 27016 . - . ID=gene-L8R42_002915;Name=L8R42_002915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002915 DAFVNP010000050.1 Protein Homology CDS 26660 27016 . - 0 ID=cds-HBQ7390976.1;Parent=gene-L8R42_002915;Dbxref=NCBI_GP:HBQ7390976.1;Name=HBQ7390976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=L8R42_002915;product=ArsC family reductase;protein_id=HBQ7390976.1;transl_table=11 DAFVNP010000050.1 tpg gene 27429 27488 . + . ID=gene-L8R42_002916;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=L8R42_002916 DAFVNP010000050.1 Protein Homology CDS 27429 27488 . + 0 ID=cds-HBQ7390977.1;Parent=gene-L8R42_002916;Dbxref=NCBI_GP:HBQ7390977.1;Name=HBQ7390977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=L8R42_002916;product=protein YpfM;protein_id=HBQ7390977.1;transl_table=11 DAFVNP010000050.1 tpg gene 27590 30703 . - . ID=gene-L8R42_002917;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=L8R42_002917 DAFVNP010000050.1 Protein Homology CDS 27590 30703 . - 0 ID=cds-HBQ7390978.1;Parent=gene-L8R42_002917;Dbxref=NCBI_GP:HBQ7390978.1;Name=HBQ7390978.1;gbkey=CDS;gene=acrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=L8R42_002917;product=multidrug efflux RND transporter permease AcrD;protein_id=HBQ7390978.1;transl_table=11 DAFVNP010000050.1 tpg gene 30888 32588 . - . ID=gene-L8R42_002918;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=L8R42_002918 DAFVNP010000050.1 Protein Homology CDS 30888 32588 . - 0 ID=cds-HBQ7390979.1;Parent=gene-L8R42_002918;Dbxref=NCBI_GP:HBQ7390979.1;Name=HBQ7390979.1;gbkey=CDS;gene=narQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=L8R42_002918;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=HBQ7390979.1;transl_table=11 DAFVNP010000050.1 tpg gene 32774 34735 . + . ID=gene-L8R42_002919;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=L8R42_002919 DAFVNP010000050.1 Protein Homology CDS 32774 34735 . + 0 ID=cds-HBQ7390980.1;Parent=gene-L8R42_002919;Dbxref=NCBI_GP:HBQ7390980.1;Name=HBQ7390980.1;gbkey=CDS;gene=aegA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=L8R42_002919;product=formate-dependent uric acid utilization protein AegA;protein_id=HBQ7390980.1;transl_table=11 ##sequence-region DAFVNP010000051.1 1 34381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000051.1 tpg region 1 34381 . + . ID=DAFVNP010000051.1:1..34381;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000051.1 tpg gene 1 427 . + . ID=gene-L8R42_002920;Name=L8R42_002920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002920;partial=true;start_range=.,1 DAFVNP010000051.1 Protein Homology CDS 1 427 . + 1 ID=cds-HBQ7390981.1;Parent=gene-L8R42_002920;Dbxref=NCBI_GP:HBQ7390981.1;Name=HBQ7390981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310519.1;locus_tag=L8R42_002920;partial=true;product=PrkA family serine protein kinase;protein_id=HBQ7390981.1;start_range=.,1;transl_table=11 DAFVNP010000051.1 tpg gene 550 1836 . + . ID=gene-L8R42_002921;Name=L8R42_002921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002921 DAFVNP010000051.1 Protein Homology CDS 550 1836 . + 0 ID=cds-HBQ7390982.1;Parent=gene-L8R42_002921;Dbxref=NCBI_GP:HBQ7390982.1;Name=HBQ7390982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=L8R42_002921;product=YeaH/YhbH family protein;protein_id=HBQ7390982.1;transl_table=11 DAFVNP010000051.1 tpg gene 1981 2181 . - . ID=gene-L8R42_002922;Name=L8R42_002922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002922 DAFVNP010000051.1 GeneMarkS-2+ CDS 1981 2181 . - 0 ID=cds-HBQ7390983.1;Parent=gene-L8R42_002922;Dbxref=NCBI_GP:HBQ7390983.1;Name=HBQ7390983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_002922;product=hypothetical protein;protein_id=HBQ7390983.1;transl_table=11 DAFVNP010000051.1 tpg gene 2476 3969 . + . ID=gene-L8R42_002923;Name=L8R42_002923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002923 DAFVNP010000051.1 Protein Homology CDS 2476 3969 . + 0 ID=cds-HBQ7390984.1;Parent=gene-L8R42_002923;Dbxref=NCBI_GP:HBQ7390984.1;Name=HBQ7390984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=L8R42_002923;product=GGDEF domain-containing protein;protein_id=HBQ7390984.1;transl_table=11 DAFVNP010000051.1 tpg gene 4019 4537 . + . ID=gene-L8R42_002924;Name=L8R42_002924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002924 DAFVNP010000051.1 Protein Homology CDS 4019 4537 . + 0 ID=cds-HBQ7390985.1;Parent=gene-L8R42_002924;Dbxref=NCBI_GP:HBQ7390985.1;Name=HBQ7390985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=L8R42_002924;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=HBQ7390985.1;transl_table=11 DAFVNP010000051.1 tpg gene 4534 4641 . - . ID=gene-L8R42_002925;Name=L8R42_002925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002925 DAFVNP010000051.1 Protein Homology CDS 4534 4641 . - 0 ID=cds-HBQ7390986.1;Parent=gene-L8R42_002925;Dbxref=NCBI_GP:HBQ7390986.1;Name=HBQ7390986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=L8R42_002925;product=hypothetical protein;protein_id=HBQ7390986.1;transl_table=11 DAFVNP010000051.1 tpg gene 4847 5293 . + . ID=gene-L8R42_002926;Name=L8R42_002926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002926 DAFVNP010000051.1 Protein Homology CDS 4847 5293 . + 0 ID=cds-HBQ7390987.1;Parent=gene-L8R42_002926;Dbxref=NCBI_GP:HBQ7390987.1;Name=HBQ7390987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=L8R42_002926;product=DUF441 domain-containing protein;protein_id=HBQ7390987.1;transl_table=11 DAFVNP010000051.1 tpg gene 5273 6067 . - . ID=gene-L8R42_002927;Name=L8R42_002927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002927 DAFVNP010000051.1 Protein Homology CDS 5273 6067 . - 0 ID=cds-HBQ7390988.1;Parent=gene-L8R42_002927;Dbxref=NCBI_GP:HBQ7390988.1;Name=HBQ7390988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=L8R42_002927;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7390988.1;transl_table=11 DAFVNP010000051.1 tpg gene 6168 7352 . + . ID=gene-L8R42_002928;Name=L8R42_002928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002928 DAFVNP010000051.1 Protein Homology CDS 6168 7352 . + 0 ID=cds-HBQ7390989.1;Parent=gene-L8R42_002928;Dbxref=NCBI_GP:HBQ7390989.1;Name=HBQ7390989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=L8R42_002928;product=CynX/NimT family MFS transporter;protein_id=HBQ7390989.1;transl_table=11 DAFVNP010000051.1 tpg gene 7471 7818 . + . ID=gene-L8R42_002929;Name=L8R42_002929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002929 DAFVNP010000051.1 Protein Homology CDS 7471 7818 . + 0 ID=cds-HBQ7390990.1;Parent=gene-L8R42_002929;Dbxref=NCBI_GP:HBQ7390990.1;Name=HBQ7390990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=L8R42_002929;product=DUF488 domain-containing protein;protein_id=HBQ7390990.1;transl_table=11 DAFVNP010000051.1 tpg gene 7804 8115 . - . ID=gene-L8R42_002930;Name=L8R42_002930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002930 DAFVNP010000051.1 Protein Homology CDS 7804 8115 . - 0 ID=cds-HBQ7390991.1;Parent=gene-L8R42_002930;Dbxref=NCBI_GP:HBQ7390991.1;Name=HBQ7390991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=L8R42_002930;product=hypothetical protein;protein_id=HBQ7390991.1;transl_table=11 DAFVNP010000051.1 tpg gene 8184 8435 . - . ID=gene-L8R42_002931;Name=L8R42_002931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002931 DAFVNP010000051.1 Protein Homology CDS 8184 8435 . - 0 ID=cds-HBQ7390992.1;Parent=gene-L8R42_002931;Dbxref=NCBI_GP:HBQ7390992.1;Name=HBQ7390992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=L8R42_002931;product=DUF333 domain-containing protein;protein_id=HBQ7390992.1;transl_table=11 DAFVNP010000051.1 tpg gene 8631 8729 . + . ID=gene-L8R42_002932;Name=L8R42_002932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002932 DAFVNP010000051.1 Protein Homology CDS 8631 8729 . + 0 ID=cds-HBQ7390993.1;Parent=gene-L8R42_002932;Dbxref=NCBI_GP:HBQ7390993.1;Name=HBQ7390993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=L8R42_002932;product=YoaK family small membrane protein;protein_id=HBQ7390993.1;transl_table=11 DAFVNP010000051.1 tpg gene 8868 9116 . - . ID=gene-L8R42_002933;Name=L8R42_002933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002933 DAFVNP010000051.1 Protein Homology CDS 8868 9116 . - 0 ID=cds-HBQ7390994.1;Parent=gene-L8R42_002933;Dbxref=NCBI_GP:HBQ7390994.1;Name=HBQ7390994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=L8R42_002933;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=HBQ7390994.1;transl_table=11 DAFVNP010000051.1 tpg gene 9428 10069 . - . ID=gene-L8R42_002934;Name=L8R42_002934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002934 DAFVNP010000051.1 Protein Homology CDS 9428 10069 . - 0 ID=cds-HBQ7390995.1;Parent=gene-L8R42_002934;Dbxref=NCBI_GP:HBQ7390995.1;Name=HBQ7390995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=L8R42_002934;product=hypothetical protein;protein_id=HBQ7390995.1;transl_table=11 DAFVNP010000051.1 tpg gene 10299 10481 . - . ID=gene-L8R42_002935;Name=L8R42_002935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002935 DAFVNP010000051.1 Protein Homology CDS 10299 10481 . - 0 ID=cds-HBQ7390996.1;Parent=gene-L8R42_002935;Dbxref=NCBI_GP:HBQ7390996.1;Name=HBQ7390996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=L8R42_002935;product=DUF1869 domain-containing protein;protein_id=HBQ7390996.1;transl_table=11 DAFVNP010000051.1 tpg gene 10484 10846 . - . ID=gene-L8R42_002936;Name=L8R42_002936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002936 DAFVNP010000051.1 Protein Homology CDS 10484 10846 . - 0 ID=cds-HBQ7390997.1;Parent=gene-L8R42_002936;Dbxref=NCBI_GP:HBQ7390997.1;Name=HBQ7390997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=L8R42_002936;product=DUF1971 domain-containing protein;protein_id=HBQ7390997.1;transl_table=11 DAFVNP010000051.1 tpg gene 11019 11657 . - . ID=gene-L8R42_002937;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=L8R42_002937 DAFVNP010000051.1 Protein Homology CDS 11019 11657 . - 0 ID=cds-HBQ7390998.1;Parent=gene-L8R42_002937;Dbxref=NCBI_GP:HBQ7390998.1;Name=HBQ7390998.1;gbkey=CDS;gene=leuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=L8R42_002937;product=leucine efflux protein LeuE;protein_id=HBQ7390998.1;transl_table=11 DAFVNP010000051.1 tpg gene 11854 12399 . - . ID=gene-L8R42_002938;Name=L8R42_002938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002938 DAFVNP010000051.1 Protein Homology CDS 11854 12399 . - 0 ID=cds-HBQ7390999.1;Parent=gene-L8R42_002938;Dbxref=NCBI_GP:HBQ7390999.1;Name=HBQ7390999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=L8R42_002938;product=chorismate mutase;protein_id=HBQ7390999.1;transl_table=11 DAFVNP010000051.1 tpg gene 12715 12963 . + . ID=gene-L8R42_002939;Name=L8R42_002939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002939 DAFVNP010000051.1 Protein Homology CDS 12715 12963 . + 0 ID=cds-HBQ7391000.1;Parent=gene-L8R42_002939;Dbxref=NCBI_GP:HBQ7391000.1;Name=HBQ7391000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=L8R42_002939;product=histidine kinase;protein_id=HBQ7391000.1;transl_table=11 DAFVNP010000051.1 tpg gene 13218 14066 . - . ID=gene-L8R42_002940;Name=L8R42_002940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002940 DAFVNP010000051.1 Protein Homology CDS 13218 14066 . - 0 ID=cds-HBQ7391001.1;Parent=gene-L8R42_002940;Dbxref=NCBI_GP:HBQ7391001.1;Name=HBQ7391001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=L8R42_002940;product=MerR family transcriptional regulator;protein_id=HBQ7391001.1;transl_table=11 DAFVNP010000051.1 tpg gene 14135 14728 . - . ID=gene-L8R42_002941;Name=L8R42_002941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002941 DAFVNP010000051.1 Protein Homology CDS 14135 14728 . - 0 ID=cds-HBQ7391002.1;Parent=gene-L8R42_002941;Dbxref=NCBI_GP:HBQ7391002.1;Name=HBQ7391002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=L8R42_002941;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7391002.1;transl_table=11 DAFVNP010000051.1 tpg gene 14873 15661 . - . ID=gene-L8R42_002942;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=L8R42_002942 DAFVNP010000051.1 Protein Homology CDS 14873 15661 . - 0 ID=cds-HBQ7391003.1;Parent=gene-L8R42_002942;Dbxref=NCBI_GP:HBQ7391003.1;Name=HBQ7391003.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=L8R42_002942;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=HBQ7391003.1;transl_table=11 DAFVNP010000051.1 tpg gene 15770 16417 . - . ID=gene-L8R42_002943;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=L8R42_002943 DAFVNP010000051.1 Protein Homology CDS 15770 16417 . - 0 ID=cds-HBQ7391004.1;Parent=gene-L8R42_002943;Dbxref=NCBI_GP:HBQ7391004.1;Name=HBQ7391004.1;gbkey=CDS;gene=zinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=L8R42_002943;product=metal-binding protein ZinT;protein_id=HBQ7391004.1;transl_table=11 DAFVNP010000051.1 tpg gene 16529 16605 . - . ID=gene-L8R42_002944;Name=L8R42_002944;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_002944 DAFVNP010000051.1 tRNAscan-SE tRNA 16529 16605 . - . ID=rna-L8R42_002944;Parent=gene-L8R42_002944;anticodon=(pos:complement(16569..16571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002944;product=tRNA-Arg DAFVNP010000051.1 tRNAscan-SE exon 16529 16605 . - . ID=exon-L8R42_002944-1;Parent=rna-L8R42_002944;anticodon=(pos:complement(16569..16571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002944;product=tRNA-Arg DAFVNP010000051.1 tpg gene 16614 16940 . - . ID=gene-L8R42_002945;Name=L8R42_002945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002945 DAFVNP010000051.1 Protein Homology CDS 16614 16940 . - 0 ID=cds-HBQ7391005.1;Parent=gene-L8R42_002945;Dbxref=NCBI_GP:HBQ7391005.1;Name=HBQ7391005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=L8R42_002945;product=four-helix bundle copper-binding protein;protein_id=HBQ7391005.1;transl_table=11 DAFVNP010000051.1 tpg gene 17134 18267 . + . ID=gene-L8R42_002946;Name=L8R42_002946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002946 DAFVNP010000051.1 Protein Homology CDS 17134 18267 . + 0 ID=cds-HBQ7391006.1;Parent=gene-L8R42_002946;Dbxref=NCBI_GP:HBQ7391006.1;Name=HBQ7391006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=L8R42_002946;product=mechanosensitive ion channel family protein;protein_id=HBQ7391006.1;transl_table=11 DAFVNP010000051.1 tpg gene 18349 18939 . - . ID=gene-L8R42_002947;Name=L8R42_002947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002947 DAFVNP010000051.1 Protein Homology CDS 18349 18939 . - 0 ID=cds-HBQ7391007.1;Parent=gene-L8R42_002947;Dbxref=NCBI_GP:HBQ7391007.1;Name=HBQ7391007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=L8R42_002947;product=ATP-binding cassette domain-containing protein;protein_id=HBQ7391007.1;transl_table=11 DAFVNP010000051.1 tpg gene 18933 19730 . - . ID=gene-L8R42_002948;Name=L8R42_002948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002948 DAFVNP010000051.1 Protein Homology CDS 18933 19730 . - 0 ID=cds-HBQ7391008.1;Parent=gene-L8R42_002948;Dbxref=NCBI_GP:HBQ7391008.1;Name=HBQ7391008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=L8R42_002948;product=ATP-binding cassette domain-containing protein;protein_id=HBQ7391008.1;transl_table=11 DAFVNP010000051.1 tpg gene 19724 20536 . - . ID=gene-L8R42_002949;Name=L8R42_002949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002949 DAFVNP010000051.1 Protein Homology CDS 19724 20536 . - 0 ID=cds-HBQ7391009.1;Parent=gene-L8R42_002949;Dbxref=NCBI_GP:HBQ7391009.1;Name=HBQ7391009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=L8R42_002949;product=ABC transporter permease;protein_id=HBQ7391009.1;transl_table=11 DAFVNP010000051.1 tpg gene 20526 21500 . - . ID=gene-L8R42_002950;Name=L8R42_002950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002950 DAFVNP010000051.1 Protein Homology CDS 20526 21500 . - 0 ID=cds-HBQ7391010.1;Parent=gene-L8R42_002950;Dbxref=NCBI_GP:HBQ7391010.1;Name=HBQ7391010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=L8R42_002950;product=ABC transporter permease;protein_id=HBQ7391010.1;transl_table=11 DAFVNP010000051.1 tpg gene 21500 23134 . - . ID=gene-L8R42_002951;Name=L8R42_002951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002951 DAFVNP010000051.1 Protein Homology CDS 21500 23134 . - 0 ID=cds-HBQ7391011.1;Parent=gene-L8R42_002951;Dbxref=NCBI_GP:HBQ7391011.1;Name=HBQ7391011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=L8R42_002951;product=ABC transporter substrate-binding protein;protein_id=HBQ7391011.1;transl_table=11 DAFVNP010000051.1 tpg gene 23816 24130 . + . ID=gene-L8R42_002952;Name=L8R42_002952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002952 DAFVNP010000051.1 Protein Homology CDS 23816 24130 . + 0 ID=cds-HBQ7391012.1;Parent=gene-L8R42_002952;Dbxref=NCBI_GP:HBQ7391012.1;Name=HBQ7391012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=L8R42_002952;product=TRL-like family protein;protein_id=HBQ7391012.1;transl_table=11 DAFVNP010000051.1 tpg gene 24279 24809 . + . ID=gene-L8R42_002953;Name=L8R42_002953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002953 DAFVNP010000051.1 Protein Homology CDS 24279 24809 . + 0 ID=cds-HBQ7391013.1;Parent=gene-L8R42_002953;Dbxref=NCBI_GP:HBQ7391013.1;Name=HBQ7391013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=L8R42_002953;product=cytochrome b;protein_id=HBQ7391013.1;transl_table=11 DAFVNP010000051.1 tpg gene 24892 25935 . - . ID=gene-L8R42_002954;Name=L8R42_002954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002954 DAFVNP010000051.1 Protein Homology CDS 24892 25935 . - 0 ID=cds-HBQ7391014.1;Parent=gene-L8R42_002954;Dbxref=NCBI_GP:HBQ7391014.1;Name=HBQ7391014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=L8R42_002954;product=exo-alpha-sialidase;protein_id=HBQ7391014.1;transl_table=11 DAFVNP010000051.1 tpg gene 26274 26741 . - . ID=gene-L8R42_002955;Name=L8R42_002955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002955 DAFVNP010000051.1 Protein Homology CDS 26274 26741 . - 0 ID=cds-HBQ7391015.1;Parent=gene-L8R42_002955;Dbxref=NCBI_GP:HBQ7391015.1;Name=HBQ7391015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=L8R42_002955;product=Hsp20 family protein;protein_id=HBQ7391015.1;transl_table=11 DAFVNP010000051.1 tpg gene 26939 27166 . - . ID=gene-L8R42_002956;Name=L8R42_002956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002956 DAFVNP010000051.1 Protein Homology CDS 26939 27166 . - 0 ID=cds-HBQ7391016.1;Parent=gene-L8R42_002956;Dbxref=NCBI_GP:HBQ7391016.1;Name=HBQ7391016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=L8R42_002956;product=hypothetical protein;protein_id=HBQ7391016.1;transl_table=11 DAFVNP010000051.1 tpg gene 27881 28225 . + . ID=gene-L8R42_002957;Name=L8R42_002957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002957 DAFVNP010000051.1 Protein Homology CDS 27881 28225 . + 0 ID=cds-HBQ7391017.1;Parent=gene-L8R42_002957;Dbxref=NCBI_GP:HBQ7391017.1;Name=HBQ7391017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=L8R42_002957;product=c-type lysozyme inhibitor;protein_id=HBQ7391017.1;transl_table=11 DAFVNP010000051.1 tpg gene 28981 29057 . - . ID=gene-L8R42_002958;Name=L8R42_002958;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_002958 DAFVNP010000051.1 tRNAscan-SE tRNA 28981 29057 . - . ID=rna-L8R42_002958;Parent=gene-L8R42_002958;anticodon=(pos:complement(29021..29023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002958;product=tRNA-Arg DAFVNP010000051.1 tRNAscan-SE exon 28981 29057 . - . ID=exon-L8R42_002958-1;Parent=rna-L8R42_002958;anticodon=(pos:complement(29021..29023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_002958;product=tRNA-Arg DAFVNP010000051.1 tpg gene 29463 30020 . - . ID=gene-L8R42_002959;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=L8R42_002959 DAFVNP010000051.1 Protein Homology CDS 29463 30020 . - 0 ID=cds-HBQ7391018.1;Parent=gene-L8R42_002959;Dbxref=NCBI_GP:HBQ7391018.1;Name=HBQ7391018.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=L8R42_002959;product=virulence membrane protein PagC;protein_id=HBQ7391018.1;transl_table=11 DAFVNP010000051.1 tpg gene 30827 31096 . + . ID=gene-L8R42_002960;Name=L8R42_002960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002960 DAFVNP010000051.1 Protein Homology CDS 30827 31096 . + 0 ID=cds-HBQ7391019.1;Parent=gene-L8R42_002960;Dbxref=NCBI_GP:HBQ7391019.1;Name=HBQ7391019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=L8R42_002960;product=virulence factor;protein_id=HBQ7391019.1;transl_table=11 DAFVNP010000051.1 tpg gene 31228 31440 . + . ID=gene-L8R42_002961;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=L8R42_002961 DAFVNP010000051.1 Protein Homology CDS 31228 31440 . + 0 ID=cds-HBQ7391020.1;Parent=gene-L8R42_002961;Dbxref=NCBI_GP:HBQ7391020.1;Name=HBQ7391020.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=L8R42_002961;product=cold shock-like protein CspF;protein_id=HBQ7391020.1;transl_table=11 DAFVNP010000051.1 tpg gene 31855 32376 . + . ID=gene-L8R42_002962;Name=L8R42_002962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002962 DAFVNP010000051.1 Protein Homology CDS 31855 32376 . + 0 ID=cds-HBQ7391021.1;Parent=gene-L8R42_002962;Dbxref=NCBI_GP:HBQ7391021.1;Name=HBQ7391021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=L8R42_002962;product=ricin-type beta-trefoil lectin domain protein;protein_id=HBQ7391021.1;transl_table=11 DAFVNP010000051.1 tpg gene 32557 32796 . + . ID=gene-L8R42_002963;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=L8R42_002963 DAFVNP010000051.1 Protein Homology CDS 32557 32796 . + 0 ID=cds-HBQ7391022.1;Parent=gene-L8R42_002963;Dbxref=NCBI_GP:HBQ7391022.1;Name=HBQ7391022.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=L8R42_002963;product=virulence protein MsgA;protein_id=HBQ7391022.1;transl_table=11 DAFVNP010000051.1 tpg gene 33285 34073 . + . ID=gene-L8R42_002964;Name=L8R42_002964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002964 DAFVNP010000051.1 Protein Homology CDS 33285 34073 . + 0 ID=cds-HBQ7391023.1;Parent=gene-L8R42_002964;Dbxref=NCBI_GP:HBQ7391023.1;Name=HBQ7391023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=L8R42_002964;product=lipoprotein EnvF;protein_id=HBQ7391023.1;transl_table=11 ##sequence-region DAFVNP010000052.1 1 33960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000052.1 tpg region 1 33960 . + . ID=DAFVNP010000052.1:1..33960;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000052.1 tpg gene 1 8784 . + . ID=gene-L8R42_002965;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=L8R42_002965;partial=true;start_range=.,1 DAFVNP010000052.1 Protein Homology CDS 1 8784 . + 0 ID=cds-HBQ7391024.1;Parent=gene-L8R42_002965;Dbxref=NCBI_GP:HBQ7391024.1;Name=HBQ7391024.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=L8R42_002965;partial=true;product=non-fimbrial adhesin SiiE;protein_id=HBQ7391024.1;start_range=.,1;transl_table=11 DAFVNP010000052.1 tpg gene 8824 10890 . + . ID=gene-L8R42_002966;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=L8R42_002966 DAFVNP010000052.1 Protein Homology CDS 8824 10890 . + 0 ID=cds-HBQ7391025.1;Parent=gene-L8R42_002966;Dbxref=NCBI_GP:HBQ7391025.1;Name=HBQ7391025.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=L8R42_002966;product=SPI-4 type I secretion system protein SiiF;protein_id=HBQ7391025.1;transl_table=11 DAFVNP010000052.1 tpg gene 11168 11449 . - . ID=gene-L8R42_002967;Name=L8R42_002967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002967 DAFVNP010000052.1 Protein Homology CDS 11168 11449 . - 0 ID=cds-HBQ7391026.1;Parent=gene-L8R42_002967;Dbxref=NCBI_GP:HBQ7391026.1;Name=HBQ7391026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=L8R42_002967;product=YjcB family protein;protein_id=HBQ7391026.1;transl_table=11 DAFVNP010000052.1 tpg gene 12011 13612 . + . ID=gene-L8R42_002968;Name=L8R42_002968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002968 DAFVNP010000052.1 Protein Homology CDS 12011 13612 . + 0 ID=cds-HBQ7391027.1;Parent=gene-L8R42_002968;Dbxref=NCBI_GP:HBQ7391027.1;Name=HBQ7391027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=L8R42_002968;product=EAL domain-containing protein;protein_id=HBQ7391027.1;transl_table=11 DAFVNP010000052.1 tpg gene 13600 13923 . - . ID=gene-L8R42_002969;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=L8R42_002969 DAFVNP010000052.1 Protein Homology CDS 13600 13923 . - 0 ID=cds-HBQ7391028.1;Parent=gene-L8R42_002969;Dbxref=NCBI_GP:HBQ7391028.1;Name=HBQ7391028.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=L8R42_002969;product=superoxide response transcriptional regulator SoxS;protein_id=HBQ7391028.1;transl_table=11 DAFVNP010000052.1 tpg gene 14010 14468 . + . ID=gene-L8R42_002970;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=L8R42_002970 DAFVNP010000052.1 Protein Homology CDS 14010 14468 . + 0 ID=cds-HBQ7391029.1;Parent=gene-L8R42_002970;Dbxref=NCBI_GP:HBQ7391029.1;Name=HBQ7391029.1;gbkey=CDS;gene=soxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=L8R42_002970;product=redox-sensitive transcriptional activator SoxR;protein_id=HBQ7391029.1;transl_table=11 DAFVNP010000052.1 tpg gene 14761 15429 . + . ID=gene-L8R42_002971;Name=L8R42_002971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002971 DAFVNP010000052.1 Protein Homology CDS 14761 15429 . + 0 ID=cds-HBQ7391030.1;Parent=gene-L8R42_002971;Dbxref=NCBI_GP:HBQ7391030.1;Name=HBQ7391030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=L8R42_002971;product=glutathione S-transferase;protein_id=HBQ7391030.1;transl_table=11 DAFVNP010000052.1 tpg gene 15776 17125 . + . ID=gene-L8R42_002972;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=L8R42_002972 DAFVNP010000052.1 Protein Homology CDS 15776 17125 . + 0 ID=cds-HBQ7391031.1;Parent=gene-L8R42_002972;Dbxref=NCBI_GP:HBQ7391031.1;Name=HBQ7391031.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=L8R42_002972;product=guanine/hypoxanthine transporter GhxP;protein_id=HBQ7391031.1;transl_table=11 DAFVNP010000052.1 tpg gene 17275 18921 . + . ID=gene-L8R42_002973;Name=L8R42_002973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002973 DAFVNP010000052.1 Protein Homology CDS 17275 18921 . + 0 ID=cds-HBQ7391032.1;Parent=gene-L8R42_002973;Dbxref=NCBI_GP:HBQ7391032.1;Name=HBQ7391032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=L8R42_002973;product=Na+/H+ antiporter;protein_id=HBQ7391032.1;transl_table=11 DAFVNP010000052.1 tpg gene 19016 19903 . - . ID=gene-L8R42_002974;Name=L8R42_002974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002974 DAFVNP010000052.1 Protein Homology CDS 19016 19903 . - 0 ID=cds-HBQ7391033.1;Parent=gene-L8R42_002974;Dbxref=NCBI_GP:HBQ7391033.1;Name=HBQ7391033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=L8R42_002974;product=LysR family transcriptional regulator;protein_id=HBQ7391033.1;transl_table=11 DAFVNP010000052.1 tpg gene 20007 20417 . + . ID=gene-L8R42_002975;Name=L8R42_002975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002975 DAFVNP010000052.1 Protein Homology CDS 20007 20417 . + 0 ID=cds-HBQ7391034.1;Parent=gene-L8R42_002975;Dbxref=NCBI_GP:HBQ7391034.1;Name=HBQ7391034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=L8R42_002975;product=CidA/LrgA family protein;protein_id=HBQ7391034.1;transl_table=11 DAFVNP010000052.1 tpg gene 20410 21099 . + . ID=gene-L8R42_002976;Name=L8R42_002976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002976 DAFVNP010000052.1 Protein Homology CDS 20410 21099 . + 0 ID=cds-HBQ7391035.1;Parent=gene-L8R42_002976;Dbxref=NCBI_GP:HBQ7391035.1;Name=HBQ7391035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=L8R42_002976;product=LrgB family protein;protein_id=HBQ7391035.1;transl_table=11 DAFVNP010000052.1 tpg gene 21138 22787 . - . ID=gene-L8R42_002977;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=L8R42_002977 DAFVNP010000052.1 Protein Homology CDS 21138 22787 . - 0 ID=cds-HBQ7391036.1;Parent=gene-L8R42_002977;Dbxref=NCBI_GP:HBQ7391036.1;Name=HBQ7391036.1;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=L8R42_002977;product=cation/acetate symporter ActP;protein_id=HBQ7391036.1;transl_table=11 DAFVNP010000052.1 tpg gene 22784 23098 . - . ID=gene-L8R42_002978;Name=L8R42_002978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002978 DAFVNP010000052.1 Protein Homology CDS 22784 23098 . - 0 ID=cds-HBQ7391037.1;Parent=gene-L8R42_002978;Dbxref=NCBI_GP:HBQ7391037.1;Name=HBQ7391037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=L8R42_002978;product=DUF485 domain-containing protein;protein_id=HBQ7391037.1;transl_table=11 DAFVNP010000052.1 tpg gene 23339 25297 . - . ID=gene-L8R42_002979;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=L8R42_002979 DAFVNP010000052.1 Protein Homology CDS 23339 25297 . - 0 ID=cds-HBQ7391038.1;Parent=gene-L8R42_002979;Dbxref=NCBI_GP:HBQ7391038.1;Name=HBQ7391038.1;gbkey=CDS;gene=acs;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=L8R42_002979;product=acetate--CoA ligase;protein_id=HBQ7391038.1;transl_table=11 DAFVNP010000052.1 tpg gene 25729 27165 . + . ID=gene-L8R42_002980;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=L8R42_002980 DAFVNP010000052.1 Protein Homology CDS 25729 27165 . + 0 ID=cds-HBQ7391039.1;Parent=gene-L8R42_002980;Dbxref=NCBI_GP:HBQ7391039.1;Name=HBQ7391039.1;gbkey=CDS;gene=nrfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=L8R42_002980;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=HBQ7391039.1;transl_table=11 DAFVNP010000052.1 tpg gene 27277 27843 . + . ID=gene-L8R42_002981;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=L8R42_002981 DAFVNP010000052.1 Protein Homology CDS 27277 27843 . + 0 ID=cds-HBQ7391040.1;Parent=gene-L8R42_002981;Dbxref=NCBI_GP:HBQ7391040.1;Name=HBQ7391040.1;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=L8R42_002981;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=HBQ7391040.1;transl_table=11 DAFVNP010000052.1 tpg gene 27840 28511 . + . ID=gene-L8R42_002982;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=L8R42_002982 DAFVNP010000052.1 Protein Homology CDS 27840 28511 . + 0 ID=cds-HBQ7391041.1;Parent=gene-L8R42_002982;Dbxref=NCBI_GP:HBQ7391041.1;Name=HBQ7391041.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=L8R42_002982;product=cytochrome c nitrite reductase Fe-S protein;protein_id=HBQ7391041.1;transl_table=11 DAFVNP010000052.1 tpg gene 28508 29464 . + . ID=gene-L8R42_002983;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=L8R42_002983 DAFVNP010000052.1 Protein Homology CDS 28508 29464 . + 0 ID=cds-HBQ7391042.1;Parent=gene-L8R42_002983;Dbxref=NCBI_GP:HBQ7391042.1;Name=HBQ7391042.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=L8R42_002983;product=cytochrome c nitrite reductase subunit NrfD;protein_id=HBQ7391042.1;transl_table=11 DAFVNP010000052.1 tpg gene 29457 31679 . + . ID=gene-L8R42_002984;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=L8R42_002984 DAFVNP010000052.1 Protein Homology CDS 29457 31679 . + 0 ID=cds-HBQ7391043.1;Parent=gene-L8R42_002984;Dbxref=NCBI_GP:HBQ7391043.1;Name=HBQ7391043.1;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=L8R42_002984;product=heme lyase NrfEFG subunit NrfEF;protein_id=HBQ7391043.1;transl_table=11 DAFVNP010000052.1 tpg gene 31676 32296 . + . ID=gene-L8R42_002985;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=L8R42_002985 DAFVNP010000052.1 Protein Homology CDS 31676 32296 . + 0 ID=cds-HBQ7391044.1;Parent=gene-L8R42_002985;Dbxref=NCBI_GP:HBQ7391044.1;Name=HBQ7391044.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=L8R42_002985;product=heme lyase NrfEFG subunit NrfG;protein_id=HBQ7391044.1;transl_table=11 DAFVNP010000052.1 tpg pseudogene 32641 33941 . + . ID=gene-L8R42_002986;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=pseudogene;locus_tag=L8R42_002986;pseudo=true DAFVNP010000052.1 Protein Homology CDS 32641 33941 . + 0 ID=cds-L8R42_002986;Parent=gene-L8R42_002986;Note=frameshifted;gbkey=CDS;gene=gltP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=L8R42_002986;product=glutamate/aspartate:proton symporter GltP;pseudo=true;transl_table=11 ##sequence-region DAFVNP010000053.1 1 33529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000053.1 tpg region 1 33529 . + . ID=DAFVNP010000053.1:1..33529;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000053.1 tpg gene 29 508 . - . ID=gene-L8R42_002987;Name=L8R42_002987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002987 DAFVNP010000053.1 Protein Homology CDS 29 508 . - 0 ID=cds-HBQ7391045.1;Parent=gene-L8R42_002987;Dbxref=NCBI_GP:HBQ7391045.1;Name=HBQ7391045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=L8R42_002987;product=hypothetical protein;protein_id=HBQ7391045.1;transl_table=11 DAFVNP010000053.1 tpg gene 709 801 . - . ID=gene-L8R42_002988;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=L8R42_002988 DAFVNP010000053.1 Protein Homology CDS 709 801 . - 0 ID=cds-HBQ7391046.1;Parent=gene-L8R42_002988;Dbxref=NCBI_GP:HBQ7391046.1;Name=HBQ7391046.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=L8R42_002988;product=protein MgtR;protein_id=HBQ7391046.1;transl_table=11 DAFVNP010000053.1 tpg gene 823 3549 . - . ID=gene-L8R42_002989;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=L8R42_002989 DAFVNP010000053.1 Protein Homology CDS 823 3549 . - 0 ID=cds-HBQ7391047.1;Parent=gene-L8R42_002989;Dbxref=NCBI_GP:HBQ7391047.1;Name=HBQ7391047.1;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=L8R42_002989;product=magnesium-translocating P-type ATPase;protein_id=HBQ7391047.1;transl_table=11 DAFVNP010000053.1 tpg gene 3769 4464 . - . ID=gene-L8R42_002990;Name=L8R42_002990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002990 DAFVNP010000053.1 Protein Homology CDS 3769 4464 . - 0 ID=cds-HBQ7391048.1;Parent=gene-L8R42_002990;Dbxref=NCBI_GP:HBQ7391048.1;Name=HBQ7391048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=L8R42_002990;product=MgtC family protein;protein_id=HBQ7391048.1;transl_table=11 DAFVNP010000053.1 tpg gene 4970 5872 . + . ID=gene-L8R42_002991;Name=L8R42_002991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002991 DAFVNP010000053.1 Protein Homology CDS 4970 5872 . + 0 ID=cds-HBQ7391049.1;Parent=gene-L8R42_002991;Dbxref=NCBI_GP:HBQ7391049.1;Name=HBQ7391049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=L8R42_002991;product=EamA family transporter;protein_id=HBQ7391049.1;transl_table=11 DAFVNP010000053.1 tpg gene 5915 6844 . - . ID=gene-L8R42_002992;Name=L8R42_002992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002992 DAFVNP010000053.1 Protein Homology CDS 5915 6844 . - 0 ID=cds-HBQ7391050.1;Parent=gene-L8R42_002992;Dbxref=NCBI_GP:HBQ7391050.1;Name=HBQ7391050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=L8R42_002992;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HBQ7391050.1;transl_table=11 DAFVNP010000053.1 tpg gene 7080 7823 . - . ID=gene-L8R42_002993;Name=L8R42_002993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002993 DAFVNP010000053.1 Protein Homology CDS 7080 7823 . - 0 ID=cds-HBQ7391051.1;Parent=gene-L8R42_002993;Dbxref=NCBI_GP:HBQ7391051.1;Name=HBQ7391051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=L8R42_002993;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=HBQ7391051.1;transl_table=11 DAFVNP010000053.1 tpg gene 7810 8919 . - . ID=gene-L8R42_002994;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=L8R42_002994 DAFVNP010000053.1 Protein Homology CDS 7810 8919 . - 0 ID=cds-HBQ7391052.1;Parent=gene-L8R42_002994;Dbxref=NCBI_GP:HBQ7391052.1;Name=HBQ7391052.1;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=L8R42_002994;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=HBQ7391052.1;transl_table=11 DAFVNP010000053.1 tpg gene 8923 9783 . - . ID=gene-L8R42_002995;Name=L8R42_002995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002995 DAFVNP010000053.1 Protein Homology CDS 8923 9783 . - 0 ID=cds-HBQ7391053.1;Parent=gene-L8R42_002995;Dbxref=NCBI_GP:HBQ7391053.1;Name=HBQ7391053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=L8R42_002995;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=HBQ7391053.1;transl_table=11 DAFVNP010000053.1 tpg gene 9780 10529 . - . ID=gene-L8R42_002996;Name=L8R42_002996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002996 DAFVNP010000053.1 Protein Homology CDS 9780 10529 . - 0 ID=cds-HBQ7391054.1;Parent=gene-L8R42_002996;Dbxref=NCBI_GP:HBQ7391054.1;Name=HBQ7391054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=L8R42_002996;product=PTS sugar transporter subunit IIC;protein_id=HBQ7391054.1;transl_table=11 DAFVNP010000053.1 tpg gene 10675 11160 . - . ID=gene-L8R42_002997;Name=L8R42_002997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002997 DAFVNP010000053.1 Protein Homology CDS 10675 11160 . - 0 ID=cds-HBQ7391055.1;Parent=gene-L8R42_002997;Dbxref=NCBI_GP:HBQ7391055.1;Name=HBQ7391055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=L8R42_002997;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=HBQ7391055.1;transl_table=11 DAFVNP010000053.1 tpg gene 11171 11596 . - . ID=gene-L8R42_002998;Name=L8R42_002998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_002998 DAFVNP010000053.1 Protein Homology CDS 11171 11596 . - 0 ID=cds-HBQ7391056.1;Parent=gene-L8R42_002998;Dbxref=NCBI_GP:HBQ7391056.1;Name=HBQ7391056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=L8R42_002998;product=PTS sugar transporter subunit IIA;protein_id=HBQ7391056.1;transl_table=11 DAFVNP010000053.1 tpg gene 11818 14616 . - . ID=gene-L8R42_002999;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=L8R42_002999 DAFVNP010000053.1 Protein Homology CDS 11818 14616 . - 0 ID=cds-HBQ7391057.1;Parent=gene-L8R42_002999;Dbxref=NCBI_GP:HBQ7391057.1;Name=HBQ7391057.1;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=L8R42_002999;product=transcriptional regulator DagR;protein_id=HBQ7391057.1;transl_table=11 DAFVNP010000053.1 tpg gene 14813 15106 . + . ID=gene-L8R42_003000;Name=L8R42_003000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003000 DAFVNP010000053.1 Protein Homology CDS 14813 15106 . + 0 ID=cds-HBQ7391058.1;Parent=gene-L8R42_003000;Dbxref=NCBI_GP:HBQ7391058.1;Name=HBQ7391058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=L8R42_003000;product=hypothetical protein;protein_id=HBQ7391058.1;transl_table=11 DAFVNP010000053.1 tpg gene 15212 16594 . + . ID=gene-L8R42_003001;Name=L8R42_003001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003001 DAFVNP010000053.1 Protein Homology CDS 15212 16594 . + 0 ID=cds-HBQ7391059.1;Parent=gene-L8R42_003001;Dbxref=NCBI_GP:HBQ7391059.1;Name=HBQ7391059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=L8R42_003001;product=glycoside hydrolase family 1 protein;protein_id=HBQ7391059.1;transl_table=11 DAFVNP010000053.1 tpg gene 16654 17847 . - . ID=gene-L8R42_003002;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=L8R42_003002 DAFVNP010000053.1 Protein Homology CDS 16654 17847 . - 0 ID=cds-HBQ7391060.1;Parent=gene-L8R42_003002;Dbxref=NCBI_GP:HBQ7391060.1;Name=HBQ7391060.1;gbkey=CDS;gene=nepI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=L8R42_003002;product=purine ribonucleoside efflux pump NepI;protein_id=HBQ7391060.1;transl_table=11 DAFVNP010000053.1 tpg gene 18063 18422 . + . ID=gene-L8R42_003003;Name=L8R42_003003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003003 DAFVNP010000053.1 Protein Homology CDS 18063 18422 . + 0 ID=cds-HBQ7391061.1;Parent=gene-L8R42_003003;Dbxref=NCBI_GP:HBQ7391061.1;Name=HBQ7391061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=L8R42_003003;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HBQ7391061.1;transl_table=11 DAFVNP010000053.1 tpg gene 18406 18729 . + . ID=gene-L8R42_003004;Name=L8R42_003004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003004 DAFVNP010000053.1 Protein Homology CDS 18406 18729 . + 0 ID=cds-HBQ7391062.1;Parent=gene-L8R42_003004;Dbxref=NCBI_GP:HBQ7391062.1;Name=HBQ7391062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=L8R42_003004;product=DNA-binding transcriptional regulator;protein_id=HBQ7391062.1;transl_table=11 DAFVNP010000053.1 tpg gene 18820 19089 . - . ID=gene-L8R42_003005;Name=L8R42_003005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003005 DAFVNP010000053.1 Protein Homology CDS 18820 19089 . - 0 ID=cds-HBQ7391063.1;Parent=gene-L8R42_003005;Dbxref=NCBI_GP:HBQ7391063.1;Name=HBQ7391063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=L8R42_003005;product=HPr family phosphocarrier protein;protein_id=HBQ7391063.1;transl_table=11 DAFVNP010000053.1 tpg gene 19099 19959 . - . ID=gene-L8R42_003006;Name=L8R42_003006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003006 DAFVNP010000053.1 Protein Homology CDS 19099 19959 . - 0 ID=cds-HBQ7391064.1;Parent=gene-L8R42_003006;Dbxref=NCBI_GP:HBQ7391064.1;Name=HBQ7391064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=L8R42_003006;product=class II aldolase;protein_id=HBQ7391064.1;transl_table=11 DAFVNP010000053.1 tpg gene 20022 21506 . - . ID=gene-L8R42_003007;Name=L8R42_003007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003007 DAFVNP010000053.1 Protein Homology CDS 20022 21506 . - 0 ID=cds-HBQ7391065.1;Parent=gene-L8R42_003007;Dbxref=NCBI_GP:HBQ7391065.1;Name=HBQ7391065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=L8R42_003007;product=carbohydrate kinase;protein_id=HBQ7391065.1;transl_table=11 DAFVNP010000053.1 tpg gene 21499 22857 . - . ID=gene-L8R42_003008;Name=L8R42_003008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003008 DAFVNP010000053.1 Protein Homology CDS 21499 22857 . - 0 ID=cds-HBQ7391066.1;Parent=gene-L8R42_003008;Dbxref=NCBI_GP:HBQ7391066.1;Name=HBQ7391066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=L8R42_003008;product=PTS galactitol transporter subunit IIC;protein_id=HBQ7391066.1;transl_table=11 DAFVNP010000053.1 tpg gene 22933 23220 . - . ID=gene-L8R42_003009;Name=L8R42_003009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003009 DAFVNP010000053.1 Protein Homology CDS 22933 23220 . - 0 ID=cds-HBQ7391067.1;Parent=gene-L8R42_003009;Dbxref=NCBI_GP:HBQ7391067.1;Name=HBQ7391067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=L8R42_003009;product=PTS sugar transporter subunit IIB;protein_id=HBQ7391067.1;transl_table=11 DAFVNP010000053.1 tpg gene 23217 23690 . - . ID=gene-L8R42_003010;Name=L8R42_003010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003010 DAFVNP010000053.1 Protein Homology CDS 23217 23690 . - 0 ID=cds-HBQ7391068.1;Parent=gene-L8R42_003010;Dbxref=NCBI_GP:HBQ7391068.1;Name=HBQ7391068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=L8R42_003010;product=PTS sugar transporter subunit IIA;protein_id=HBQ7391068.1;transl_table=11 DAFVNP010000053.1 tpg gene 23708 24451 . - . ID=gene-L8R42_003011;Name=L8R42_003011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003011 DAFVNP010000053.1 Protein Homology CDS 23708 24451 . - 0 ID=cds-HBQ7391069.1;Parent=gene-L8R42_003011;Dbxref=NCBI_GP:HBQ7391069.1;Name=HBQ7391069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=L8R42_003011;product=GntR family transcriptional regulator;protein_id=HBQ7391069.1;transl_table=11 DAFVNP010000053.1 tpg gene 24804 25256 . - . ID=gene-L8R42_003012;Name=L8R42_003012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003012 DAFVNP010000053.1 Protein Homology CDS 24804 25256 . - 0 ID=cds-HBQ7391070.1;Parent=gene-L8R42_003012;Dbxref=NCBI_GP:HBQ7391070.1;Name=HBQ7391070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=L8R42_003012;product=DUF1198 domain-containing protein;protein_id=HBQ7391070.1;transl_table=11 DAFVNP010000053.1 tpg gene 25449 26840 . - . ID=gene-L8R42_003013;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=L8R42_003013 DAFVNP010000053.1 Protein Homology CDS 25449 26840 . - 0 ID=cds-HBQ7391071.1;Parent=gene-L8R42_003013;Dbxref=NCBI_GP:HBQ7391071.1;Name=HBQ7391071.1;gbkey=CDS;gene=uhpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=L8R42_003013;product=hexose-6-phosphate:phosphate antiporter;protein_id=HBQ7391071.1;transl_table=11 DAFVNP010000053.1 tpg gene 26983 28311 . - . ID=gene-L8R42_003014;Name=L8R42_003014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003014 DAFVNP010000053.1 Protein Homology CDS 26983 28311 . - 0 ID=cds-HBQ7391072.1;Parent=gene-L8R42_003014;Dbxref=NCBI_GP:HBQ7391072.1;Name=HBQ7391072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=L8R42_003014;product=MFS transporter;protein_id=HBQ7391072.1;transl_table=11 DAFVNP010000053.1 tpg gene 28321 29823 . - . ID=gene-L8R42_003015;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=L8R42_003015 DAFVNP010000053.1 Protein Homology CDS 28321 29823 . - 0 ID=cds-HBQ7391073.1;Parent=gene-L8R42_003015;Dbxref=NCBI_GP:HBQ7391073.1;Name=HBQ7391073.1;gbkey=CDS;gene=uhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=L8R42_003015;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=HBQ7391073.1;transl_table=11 DAFVNP010000053.1 tpg gene 29823 30413 . - . ID=gene-L8R42_003016;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=L8R42_003016 DAFVNP010000053.1 Protein Homology CDS 29823 30413 . - 0 ID=cds-HBQ7391074.1;Parent=gene-L8R42_003016;Dbxref=NCBI_GP:HBQ7391074.1;Name=HBQ7391074.1;gbkey=CDS;gene=uhpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=L8R42_003016;product=transcriptional regulator UhpA;protein_id=HBQ7391074.1;transl_table=11 DAFVNP010000053.1 tpg gene 30488 31501 . - . ID=gene-L8R42_003017;Name=L8R42_003017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003017 DAFVNP010000053.1 Protein Homology CDS 30488 31501 . - 0 ID=cds-HBQ7391075.1;Parent=gene-L8R42_003017;Dbxref=NCBI_GP:HBQ7391075.1;Name=HBQ7391075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=L8R42_003017;product=aldose 1-epimerase family protein;protein_id=HBQ7391075.1;transl_table=11 DAFVNP010000053.1 tpg gene 31513 32829 . - . ID=gene-L8R42_003018;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=L8R42_003018 DAFVNP010000053.1 Protein Homology CDS 31513 32829 . - 0 ID=cds-HBQ7391076.1;Parent=gene-L8R42_003018;Dbxref=NCBI_GP:HBQ7391076.1;Name=HBQ7391076.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=L8R42_003018;product=L-fucose:H+ symporter permease;protein_id=HBQ7391076.1;transl_table=11 DAFVNP010000053.1 tpg gene 32860 33529 . - . ID=gene-L8R42_003019;Name=L8R42_003019;end_range=33529,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003019;partial=true DAFVNP010000053.1 Protein Homology CDS 32860 33529 . - 1 ID=cds-HBQ7391077.1;Parent=gene-L8R42_003019;Dbxref=NCBI_GP:HBQ7391077.1;Name=HBQ7391077.1;end_range=33529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=L8R42_003019;partial=true;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=HBQ7391077.1;transl_table=11 ##sequence-region DAFVNP010000054.1 1 32894 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000054.1 tpg region 1 32894 . + . ID=DAFVNP010000054.1:1..32894;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000054.1 tpg gene 189 1232 . + . ID=gene-L8R42_003020;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=L8R42_003020 DAFVNP010000054.1 Protein Homology CDS 189 1232 . + 0 ID=cds-HBQ7391078.1;Parent=gene-L8R42_003020;Dbxref=NCBI_GP:HBQ7391078.1;Name=HBQ7391078.1;gbkey=CDS;gene=citC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=L8R42_003020;product=[citrate (pro-3S)-lyase] ligase;protein_id=HBQ7391078.1;transl_table=11 DAFVNP010000054.1 tpg gene 1262 1555 . + . ID=gene-L8R42_003021;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=L8R42_003021 DAFVNP010000054.1 Protein Homology CDS 1262 1555 . + 0 ID=cds-HBQ7391079.1;Parent=gene-L8R42_003021;Dbxref=NCBI_GP:HBQ7391079.1;Name=HBQ7391079.1;gbkey=CDS;gene=citD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=L8R42_003021;product=citrate lyase acyl carrier protein;protein_id=HBQ7391079.1;transl_table=11 DAFVNP010000054.1 tpg gene 1552 2421 . + . ID=gene-L8R42_003022;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=L8R42_003022 DAFVNP010000054.1 Protein Homology CDS 1552 2421 . + 0 ID=cds-HBQ7391080.1;Parent=gene-L8R42_003022;Dbxref=NCBI_GP:HBQ7391080.1;Name=HBQ7391080.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=L8R42_003022;product=citrate (pro-3S)-lyase subunit beta;protein_id=HBQ7391080.1;transl_table=11 DAFVNP010000054.1 tpg gene 2432 3952 . + . ID=gene-L8R42_003023;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=L8R42_003023 DAFVNP010000054.1 Protein Homology CDS 2432 3952 . + 0 ID=cds-HBQ7391081.1;Parent=gene-L8R42_003023;Dbxref=NCBI_GP:HBQ7391081.1;Name=HBQ7391081.1;gbkey=CDS;gene=citF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=L8R42_003023;product=citrate lyase subunit alpha;protein_id=HBQ7391081.1;transl_table=11 DAFVNP010000054.1 tpg gene 3952 4503 . + . ID=gene-L8R42_003024;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=L8R42_003024 DAFVNP010000054.1 Protein Homology CDS 3952 4503 . + 0 ID=cds-HBQ7391082.1;Parent=gene-L8R42_003024;Dbxref=NCBI_GP:HBQ7391082.1;Name=HBQ7391082.1;gbkey=CDS;gene=citX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=L8R42_003024;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=HBQ7391082.1;transl_table=11 DAFVNP010000054.1 tpg gene 4481 5389 . + . ID=gene-L8R42_003025;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=L8R42_003025 DAFVNP010000054.1 Protein Homology CDS 4481 5389 . + 0 ID=cds-HBQ7391083.1;Parent=gene-L8R42_003025;Dbxref=NCBI_GP:HBQ7391083.1;Name=HBQ7391083.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=L8R42_003025;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=HBQ7391083.1;transl_table=11 DAFVNP010000054.1 tpg gene 5569 6390 . + . ID=gene-L8R42_003026;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=L8R42_003026 DAFVNP010000054.1 Protein Homology CDS 5569 6390 . + 0 ID=cds-HBQ7391084.1;Parent=gene-L8R42_003026;Dbxref=NCBI_GP:HBQ7391084.1;Name=HBQ7391084.1;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=L8R42_003026;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=HBQ7391084.1;transl_table=11 DAFVNP010000054.1 tpg pseudogene 6548 6800 . + . ID=gene-L8R42_003027;Name=L8R42_003027;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003027;pseudo=true DAFVNP010000054.1 Protein Homology CDS 6548 6800 . + 0 ID=cds-L8R42_003027;Parent=gene-L8R42_003027;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446529.1;locus_tag=L8R42_003027;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000054.1 tpg gene 7245 8393 . + . ID=gene-L8R42_003028;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=L8R42_003028 DAFVNP010000054.1 Protein Homology CDS 7245 8393 . + 0 ID=cds-HBQ7391085.1;Parent=gene-L8R42_003028;Dbxref=NCBI_GP:HBQ7391085.1;Name=HBQ7391085.1;gbkey=CDS;gene=carA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=L8R42_003028;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=HBQ7391085.1;transl_table=11 DAFVNP010000054.1 tpg gene 8412 11639 . + . ID=gene-L8R42_003029;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=L8R42_003029 DAFVNP010000054.1 Protein Homology CDS 8412 11639 . + 0 ID=cds-HBQ7391086.1;Parent=gene-L8R42_003029;Dbxref=NCBI_GP:HBQ7391086.1;Name=HBQ7391086.1;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=L8R42_003029;product=carbamoyl-phosphate synthase large subunit;protein_id=HBQ7391086.1;transl_table=11 DAFVNP010000054.1 tpg gene 11913 12308 . + . ID=gene-L8R42_003030;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=L8R42_003030 DAFVNP010000054.1 Protein Homology CDS 11913 12308 . + 0 ID=cds-HBQ7391087.1;Parent=gene-L8R42_003030;Dbxref=NCBI_GP:HBQ7391087.1;Name=HBQ7391087.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=L8R42_003030;product=carnitine metabolism transcriptional regulator CaiF;protein_id=HBQ7391087.1;transl_table=11 DAFVNP010000054.1 tpg gene 12386 12982 . - . ID=gene-L8R42_003031;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=L8R42_003031 DAFVNP010000054.1 Protein Homology CDS 12386 12982 . - 0 ID=cds-HBQ7391088.1;Parent=gene-L8R42_003031;Dbxref=NCBI_GP:HBQ7391088.1;Name=HBQ7391088.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=L8R42_003031;product=carnitine operon protein CaiE;protein_id=HBQ7391088.1;transl_table=11 DAFVNP010000054.1 tpg gene 13092 13877 . - . ID=gene-L8R42_003032;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=L8R42_003032 DAFVNP010000054.1 Protein Homology CDS 13092 13877 . - 0 ID=cds-HBQ7391089.1;Parent=gene-L8R42_003032;Dbxref=NCBI_GP:HBQ7391089.1;Name=HBQ7391089.1;gbkey=CDS;gene=caiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=L8R42_003032;product=crotonobetainyl-CoA hydratase;protein_id=HBQ7391089.1;transl_table=11 DAFVNP010000054.1 tpg gene 13931 15484 . - . ID=gene-L8R42_003033;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=L8R42_003033 DAFVNP010000054.1 Protein Homology CDS 13931 15484 . - 0 ID=cds-HBQ7391090.1;Parent=gene-L8R42_003033;Dbxref=NCBI_GP:HBQ7391090.1;Name=HBQ7391090.1;gbkey=CDS;gene=caiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=L8R42_003033;product=crotonobetaine/carnitine-CoA ligase;protein_id=HBQ7391090.1;transl_table=11 DAFVNP010000054.1 tpg gene 15547 16764 . - . ID=gene-L8R42_003034;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=L8R42_003034 DAFVNP010000054.1 Protein Homology CDS 15547 16764 . - 0 ID=cds-HBQ7391091.1;Parent=gene-L8R42_003034;Dbxref=NCBI_GP:HBQ7391091.1;Name=HBQ7391091.1;gbkey=CDS;gene=caiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=L8R42_003034;product=L-carnitine CoA-transferase;protein_id=HBQ7391091.1;transl_table=11 DAFVNP010000054.1 tpg gene 16876 18018 . - . ID=gene-L8R42_003035;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=L8R42_003035 DAFVNP010000054.1 Protein Homology CDS 16876 18018 . - 0 ID=cds-HBQ7391092.1;Parent=gene-L8R42_003035;Dbxref=NCBI_GP:HBQ7391092.1;Name=HBQ7391092.1;gbkey=CDS;gene=caiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=L8R42_003035;product=crotonobetainyl-CoA dehydrogenase;protein_id=HBQ7391092.1;transl_table=11 DAFVNP010000054.1 tpg gene 18053 19570 . - . ID=gene-L8R42_003036;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=L8R42_003036 DAFVNP010000054.1 Protein Homology CDS 18053 19570 . - 0 ID=cds-HBQ7391093.1;Parent=gene-L8R42_003036;Dbxref=NCBI_GP:HBQ7391093.1;Name=HBQ7391093.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=L8R42_003036;product=L-carnitine/gamma-butyrobetaine antiport BCCT transporter;protein_id=HBQ7391093.1;transl_table=11 DAFVNP010000054.1 tpg gene 20051 20821 . + . ID=gene-L8R42_003037;Name=L8R42_003037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003037 DAFVNP010000054.1 Protein Homology CDS 20051 20821 . + 0 ID=cds-HBQ7391094.1;Parent=gene-L8R42_003037;Dbxref=NCBI_GP:HBQ7391094.1;Name=HBQ7391094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=L8R42_003037;product=electron transfer flavoprotein FixA;protein_id=HBQ7391094.1;transl_table=11 DAFVNP010000054.1 tpg gene 20837 21778 . + . ID=gene-L8R42_003038;Name=L8R42_003038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003038 DAFVNP010000054.1 Protein Homology CDS 20837 21778 . + 0 ID=cds-HBQ7391095.1;Parent=gene-L8R42_003038;Dbxref=NCBI_GP:HBQ7391095.1;Name=HBQ7391095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=L8R42_003038;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=HBQ7391095.1;transl_table=11 DAFVNP010000054.1 tpg gene 21828 23114 . + . ID=gene-L8R42_003039;Name=L8R42_003039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003039 DAFVNP010000054.1 Protein Homology CDS 21828 23114 . + 0 ID=cds-HBQ7391096.1;Parent=gene-L8R42_003039;Dbxref=NCBI_GP:HBQ7391096.1;Name=HBQ7391096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=L8R42_003039;product=FAD-dependent oxidoreductase;protein_id=HBQ7391096.1;transl_table=11 DAFVNP010000054.1 tpg gene 23111 23398 . + . ID=gene-L8R42_003040;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=L8R42_003040 DAFVNP010000054.1 Protein Homology CDS 23111 23398 . + 0 ID=cds-HBQ7391097.1;Parent=gene-L8R42_003040;Dbxref=NCBI_GP:HBQ7391097.1;Name=HBQ7391097.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=L8R42_003040;product=ferredoxin-like protein FixX;protein_id=HBQ7391097.1;transl_table=11 DAFVNP010000054.1 tpg gene 23546 24886 . + . ID=gene-L8R42_003041;Name=L8R42_003041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003041 DAFVNP010000054.1 Protein Homology CDS 23546 24886 . + 0 ID=cds-HBQ7391098.1;Parent=gene-L8R42_003041;Dbxref=NCBI_GP:HBQ7391098.1;Name=HBQ7391098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=L8R42_003041;product=MFS transporter;protein_id=HBQ7391098.1;transl_table=11 DAFVNP010000054.1 tpg gene 24975 25205 . + . ID=gene-L8R42_003042;Name=L8R42_003042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003042 DAFVNP010000054.1 Protein Homology CDS 24975 25205 . + 0 ID=cds-HBQ7391099.1;Parent=gene-L8R42_003042;Dbxref=NCBI_GP:HBQ7391099.1;Name=HBQ7391099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=L8R42_003042;product=YgdI/YgdR family lipoprotein;protein_id=HBQ7391099.1;transl_table=11 DAFVNP010000054.1 tpg gene 25505 25921 . + . ID=gene-L8R42_003043;Name=L8R42_003043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003043 DAFVNP010000054.1 Protein Homology CDS 25505 25921 . + 0 ID=cds-HBQ7391100.1;Parent=gene-L8R42_003043;Dbxref=NCBI_GP:HBQ7391100.1;Name=HBQ7391100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=L8R42_003043;product=hypothetical protein;protein_id=HBQ7391100.1;transl_table=11 DAFVNP010000054.1 tpg gene 26145 26435 . - . ID=gene-L8R42_003044;Name=L8R42_003044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003044 DAFVNP010000054.1 Protein Homology CDS 26145 26435 . - 0 ID=cds-HBQ7391101.1;Parent=gene-L8R42_003044;Dbxref=NCBI_GP:HBQ7391101.1;Name=HBQ7391101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=L8R42_003044;product=DUF1471 domain-containing protein;protein_id=HBQ7391101.1;transl_table=11 DAFVNP010000054.1 tpg gene 27334 29223 . + . ID=gene-L8R42_003045;Name=L8R42_003045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003045 DAFVNP010000054.1 Protein Homology CDS 27334 29223 . + 0 ID=cds-HBQ7391102.1;Parent=gene-L8R42_003045;Dbxref=NCBI_GP:HBQ7391102.1;Name=HBQ7391102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=L8R42_003045;product=sulfatase-like hydrolase/transferase;protein_id=HBQ7391102.1;transl_table=11 DAFVNP010000054.1 tpg gene 29777 30307 . + . ID=gene-L8R42_003046;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=L8R42_003046 DAFVNP010000054.1 Protein Homology CDS 29777 30307 . + 0 ID=cds-HBQ7391103.1;Parent=gene-L8R42_003046;Dbxref=NCBI_GP:HBQ7391103.1;Name=HBQ7391103.1;gbkey=CDS;gene=kefF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=L8R42_003046;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=HBQ7391103.1;transl_table=11 DAFVNP010000054.1 tpg gene 30300 32162 . + . ID=gene-L8R42_003047;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=L8R42_003047 DAFVNP010000054.1 Protein Homology CDS 30300 32162 . + 0 ID=cds-HBQ7391104.1;Parent=gene-L8R42_003047;Dbxref=NCBI_GP:HBQ7391104.1;Name=HBQ7391104.1;gbkey=CDS;gene=kefC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=L8R42_003047;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=HBQ7391104.1;transl_table=11 DAFVNP010000054.1 tpg gene 32361 32840 . + . ID=gene-L8R42_003048;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=L8R42_003048 DAFVNP010000054.1 Protein Homology CDS 32361 32840 . + 0 ID=cds-HBQ7391105.1;Parent=gene-L8R42_003048;Dbxref=NCBI_GP:HBQ7391105.1;Name=HBQ7391105.1;gbkey=CDS;gene=folA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=L8R42_003048;product=type 3 dihydrofolate reductase;protein_id=HBQ7391105.1;transl_table=11 ##sequence-region DAFVNP010000055.1 1 32387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000055.1 tpg region 1 32387 . + . ID=DAFVNP010000055.1:1..32387;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000055.1 tpg gene 480 2069 . + . ID=gene-L8R42_003049;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=L8R42_003049 DAFVNP010000055.1 Protein Homology CDS 480 2069 . + 0 ID=cds-HBQ7391106.1;Parent=gene-L8R42_003049;Dbxref=NCBI_GP:HBQ7391106.1;Name=HBQ7391106.1;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=L8R42_003049;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=HBQ7391106.1;transl_table=11 DAFVNP010000055.1 tpg gene 2085 3374 . + . ID=gene-L8R42_003050;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=L8R42_003050 DAFVNP010000055.1 Protein Homology CDS 2085 3374 . + 0 ID=cds-HBQ7391107.1;Parent=gene-L8R42_003050;Dbxref=NCBI_GP:HBQ7391107.1;Name=HBQ7391107.1;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=L8R42_003050;product=phosphoribosylamine--glycine ligase;protein_id=HBQ7391107.1;transl_table=11 DAFVNP010000055.1 tpg gene 3371 4696 . - . ID=gene-L8R42_003051;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=L8R42_003051 DAFVNP010000055.1 Protein Homology CDS 3371 4696 . - 0 ID=cds-HBQ7391108.1;Parent=gene-L8R42_003051;Dbxref=NCBI_GP:HBQ7391108.1;Name=HBQ7391108.1;gbkey=CDS;gene=zraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=L8R42_003051;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=HBQ7391108.1;transl_table=11 DAFVNP010000055.1 tpg gene 4702 6099 . - . ID=gene-L8R42_003052;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=L8R42_003052 DAFVNP010000055.1 Protein Homology CDS 4702 6099 . - 0 ID=cds-HBQ7391109.1;Parent=gene-L8R42_003052;Dbxref=NCBI_GP:HBQ7391109.1;Name=HBQ7391109.1;gbkey=CDS;gene=zraS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=L8R42_003052;product=two-component system sensor histidine kinase ZraS;protein_id=HBQ7391109.1;transl_table=11 DAFVNP010000055.1 tpg gene 6353 6808 . + . ID=gene-L8R42_003053;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=L8R42_003053 DAFVNP010000055.1 Protein Homology CDS 6353 6808 . + 0 ID=cds-HBQ7391110.1;Parent=gene-L8R42_003053;Dbxref=NCBI_GP:HBQ7391110.1;Name=HBQ7391110.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=L8R42_003053;product=zinc resistance sensor/chaperone ZraP;protein_id=HBQ7391110.1;transl_table=11 DAFVNP010000055.1 tpg gene 6850 7542 . - . ID=gene-L8R42_003054;Name=L8R42_003054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003054 DAFVNP010000055.1 Protein Homology CDS 6850 7542 . - 0 ID=cds-HBQ7391111.1;Parent=gene-L8R42_003054;Dbxref=NCBI_GP:HBQ7391111.1;Name=HBQ7391111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=L8R42_003054;product=DUF1481 domain-containing protein;protein_id=HBQ7391111.1;transl_table=11 DAFVNP010000055.1 tpg gene 7554 7826 . - . ID=gene-L8R42_003055;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=L8R42_003055 DAFVNP010000055.1 Protein Homology CDS 7554 7826 . - 0 ID=cds-HBQ7391112.1;Parent=gene-L8R42_003055;Dbxref=NCBI_GP:HBQ7391112.1;Name=HBQ7391112.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=L8R42_003055;product=DNA-binding protein HU-alpha;protein_id=HBQ7391112.1;transl_table=11 DAFVNP010000055.1 tpg gene 8013 8603 . - . ID=gene-L8R42_003056;Name=L8R42_003056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003056 DAFVNP010000055.1 Protein Homology CDS 8013 8603 . - 0 ID=cds-HBQ7391113.1;Parent=gene-L8R42_003056;Dbxref=NCBI_GP:HBQ7391113.1;Name=HBQ7391113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=L8R42_003056;product=YjaG family protein;protein_id=HBQ7391113.1;transl_table=11 DAFVNP010000055.1 tpg gene 8645 9316 . - . ID=gene-L8R42_003057;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=L8R42_003057 DAFVNP010000055.1 Protein Homology CDS 8645 9316 . - 0 ID=cds-HBQ7391114.1;Parent=gene-L8R42_003057;Dbxref=NCBI_GP:HBQ7391114.1;Name=HBQ7391114.1;gbkey=CDS;gene=nfi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=L8R42_003057;product=deoxyribonuclease V;protein_id=HBQ7391114.1;transl_table=11 DAFVNP010000055.1 tpg gene 9326 10390 . - . ID=gene-L8R42_003058;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=L8R42_003058 DAFVNP010000055.1 Protein Homology CDS 9326 10390 . - 0 ID=cds-HBQ7391115.1;Parent=gene-L8R42_003058;Dbxref=NCBI_GP:HBQ7391115.1;Name=HBQ7391115.1;gbkey=CDS;gene=hemE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137620.1;locus_tag=L8R42_003058;product=uroporphyrinogen decarboxylase;protein_id=HBQ7391115.1;transl_table=11 DAFVNP010000055.1 tpg gene 10431 11204 . - . ID=gene-L8R42_003059;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=L8R42_003059 DAFVNP010000055.1 Protein Homology CDS 10431 11204 . - 0 ID=cds-HBQ7391116.1;Parent=gene-L8R42_003059;Dbxref=NCBI_GP:HBQ7391116.1;Name=HBQ7391116.1;gbkey=CDS;gene=nudC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=L8R42_003059;product=NAD(+) diphosphatase;protein_id=HBQ7391116.1;transl_table=11 DAFVNP010000055.1 tpg gene 11297 11785 . + . ID=gene-L8R42_003060;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=L8R42_003060 DAFVNP010000055.1 Protein Homology CDS 11297 11785 . + 0 ID=cds-HBQ7391117.1;Parent=gene-L8R42_003060;Dbxref=NCBI_GP:HBQ7391117.1;Name=HBQ7391117.1;gbkey=CDS;gene=rsd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=L8R42_003060;product=sigma D regulator;protein_id=HBQ7391117.1;transl_table=11 DAFVNP010000055.1 cmsearch riboswitch 11900 12063 . + . ID=id-DAFVNP010000055.1:11900..12063;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch DAFVNP010000055.1 tpg gene 12149 14044 . + . ID=gene-L8R42_003061;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=L8R42_003061 DAFVNP010000055.1 Protein Homology CDS 12149 14044 . + 0 ID=cds-HBQ7391118.1;Parent=gene-L8R42_003061;Dbxref=NCBI_GP:HBQ7391118.1;Name=HBQ7391118.1;gbkey=CDS;gene=thiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=L8R42_003061;product=phosphomethylpyrimidine synthase ThiC;protein_id=HBQ7391118.1;transl_table=11 DAFVNP010000055.1 tpg gene 14044 14679 . + . ID=gene-L8R42_003062;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=L8R42_003062 DAFVNP010000055.1 Protein Homology CDS 14044 14679 . + 0 ID=cds-HBQ7391119.1;Parent=gene-L8R42_003062;Dbxref=NCBI_GP:HBQ7391119.1;Name=HBQ7391119.1;gbkey=CDS;gene=thiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=L8R42_003062;product=thiamine phosphate synthase;protein_id=HBQ7391119.1;transl_table=11 DAFVNP010000055.1 tpg gene 14672 15430 . + . ID=gene-L8R42_003063;Name=L8R42_003063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003063 DAFVNP010000055.1 Protein Homology CDS 14672 15430 . + 0 ID=cds-HBQ7391120.1;Parent=gene-L8R42_003063;Dbxref=NCBI_GP:HBQ7391120.1;Name=HBQ7391120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=L8R42_003063;product=HesA/MoeB/ThiF family protein;protein_id=HBQ7391120.1;transl_table=11 DAFVNP010000055.1 tpg gene 15411 15611 . + . ID=gene-L8R42_003064;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=L8R42_003064 DAFVNP010000055.1 Protein Homology CDS 15411 15611 . + 0 ID=cds-HBQ7391121.1;Parent=gene-L8R42_003064;Dbxref=NCBI_GP:HBQ7391121.1;Name=HBQ7391121.1;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=L8R42_003064;product=sulfur carrier protein ThiS;protein_id=HBQ7391121.1;transl_table=11 DAFVNP010000055.1 tpg gene 15613 16383 . + . ID=gene-L8R42_003065;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=L8R42_003065 DAFVNP010000055.1 Protein Homology CDS 15613 16383 . + 0 ID=cds-HBQ7391122.1;Parent=gene-L8R42_003065;Dbxref=NCBI_GP:HBQ7391122.1;Name=HBQ7391122.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=L8R42_003065;product=thiazole synthase;protein_id=HBQ7391122.1;transl_table=11 DAFVNP010000055.1 tpg gene 16380 17513 . + . ID=gene-L8R42_003066;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=L8R42_003066 DAFVNP010000055.1 Protein Homology CDS 16380 17513 . + 0 ID=cds-HBQ7391123.1;Parent=gene-L8R42_003066;Dbxref=NCBI_GP:HBQ7391123.1;Name=HBQ7391123.1;gbkey=CDS;gene=thiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=L8R42_003066;product=2-iminoacetate synthase ThiH;protein_id=HBQ7391123.1;transl_table=11 DAFVNP010000055.1 tpg gene 17734 18762 . - . ID=gene-L8R42_003067;Name=L8R42_003067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003067 DAFVNP010000055.1 Protein Homology CDS 17734 18762 . - 0 ID=cds-HBQ7391124.1;Parent=gene-L8R42_003067;Dbxref=NCBI_GP:HBQ7391124.1;Name=HBQ7391124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=L8R42_003067;product=type III secretion system effector arginine glycosyltransferase SseK1;protein_id=HBQ7391124.1;transl_table=11 DAFVNP010000055.1 tpg gene 19168 19488 . + . ID=gene-L8R42_003068;Name=L8R42_003068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003068 DAFVNP010000055.1 Protein Homology CDS 19168 19488 . + 0 ID=cds-HBQ7391125.1;Parent=gene-L8R42_003068;Dbxref=NCBI_GP:HBQ7391125.1;Name=HBQ7391125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001654076.1;locus_tag=L8R42_003068;product=cytoplasmic protein;protein_id=HBQ7391125.1;transl_table=11 DAFVNP010000055.1 tpg gene 19490 19816 . - . ID=gene-L8R42_003069;Name=L8R42_003069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003069 DAFVNP010000055.1 Protein Homology CDS 19490 19816 . - 0 ID=cds-HBQ7391126.1;Parent=gene-L8R42_003069;Dbxref=NCBI_GP:HBQ7391126.1;Name=HBQ7391126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=L8R42_003069;product=hypothetical protein;protein_id=HBQ7391126.1;transl_table=11 DAFVNP010000055.1 tpg gene 19858 24081 . - . ID=gene-L8R42_003070;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=L8R42_003070 DAFVNP010000055.1 Protein Homology CDS 19858 24081 . - 0 ID=cds-HBQ7391127.1;Parent=gene-L8R42_003070;Dbxref=NCBI_GP:HBQ7391127.1;Name=HBQ7391127.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=L8R42_003070;product=DNA-directed RNA polymerase subunit beta';protein_id=HBQ7391127.1;transl_table=11 DAFVNP010000055.1 tpg gene 24158 28186 . - . ID=gene-L8R42_003071;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=L8R42_003071 DAFVNP010000055.1 Protein Homology CDS 24158 28186 . - 0 ID=cds-HBQ7391128.1;Parent=gene-L8R42_003071;Dbxref=NCBI_GP:HBQ7391128.1;Name=HBQ7391128.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=L8R42_003071;product=DNA-directed RNA polymerase subunit beta;protein_id=HBQ7391128.1;transl_table=11 DAFVNP010000055.1 tpg gene 28504 28869 . - . ID=gene-L8R42_003072;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=L8R42_003072 DAFVNP010000055.1 Protein Homology CDS 28504 28869 . - 0 ID=cds-HBQ7391129.1;Parent=gene-L8R42_003072;Dbxref=NCBI_GP:HBQ7391129.1;Name=HBQ7391129.1;gbkey=CDS;gene=rplL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=L8R42_003072;product=50S ribosomal protein L7/L12;protein_id=HBQ7391129.1;transl_table=11 DAFVNP010000055.1 tpg gene 28936 29433 . - . ID=gene-L8R42_003073;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=L8R42_003073 DAFVNP010000055.1 Protein Homology CDS 28936 29433 . - 0 ID=cds-HBQ7391130.1;Parent=gene-L8R42_003073;Dbxref=NCBI_GP:HBQ7391130.1;Name=HBQ7391130.1;gbkey=CDS;gene=rplJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=L8R42_003073;product=50S ribosomal protein L10;protein_id=HBQ7391130.1;transl_table=11 DAFVNP010000055.1 tpg gene 29853 30557 . - . ID=gene-L8R42_003074;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=L8R42_003074 DAFVNP010000055.1 Protein Homology CDS 29853 30557 . - 0 ID=cds-HBQ7391131.1;Parent=gene-L8R42_003074;Dbxref=NCBI_GP:HBQ7391131.1;Name=HBQ7391131.1;gbkey=CDS;gene=rplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=L8R42_003074;product=50S ribosomal protein L1;protein_id=HBQ7391131.1;transl_table=11 DAFVNP010000055.1 tpg gene 30561 30989 . - . ID=gene-L8R42_003075;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=L8R42_003075 DAFVNP010000055.1 Protein Homology CDS 30561 30989 . - 0 ID=cds-HBQ7391132.1;Parent=gene-L8R42_003075;Dbxref=NCBI_GP:HBQ7391132.1;Name=HBQ7391132.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=L8R42_003075;product=50S ribosomal protein L11;protein_id=HBQ7391132.1;transl_table=11 DAFVNP010000055.1 tpg gene 31147 31692 . - . ID=gene-L8R42_003076;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=L8R42_003076 DAFVNP010000055.1 Protein Homology CDS 31147 31692 . - 0 ID=cds-HBQ7391133.1;Parent=gene-L8R42_003076;Dbxref=NCBI_GP:HBQ7391133.1;Name=HBQ7391133.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=L8R42_003076;product=transcription termination/antitermination protein NusG;protein_id=HBQ7391133.1;transl_table=11 DAFVNP010000055.1 tpg gene 31694 32077 . - . ID=gene-L8R42_003077;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=L8R42_003077 DAFVNP010000055.1 Protein Homology CDS 31694 32077 . - 0 ID=cds-HBQ7391134.1;Parent=gene-L8R42_003077;Dbxref=NCBI_GP:HBQ7391134.1;Name=HBQ7391134.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=L8R42_003077;product=preprotein translocase subunit SecE;protein_id=HBQ7391134.1;transl_table=11 DAFVNP010000055.1 tpg gene 32307 32387 . - . ID=gene-L8R42_003078;Name=L8R42_003078;end_range=32387,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003078;partial=true DAFVNP010000055.1 Protein Homology CDS 32307 32387 . - 0 ID=cds-HBQ7391135.1;Parent=gene-L8R42_003078;Dbxref=NCBI_GP:HBQ7391135.1;Name=HBQ7391135.1;end_range=32387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=L8R42_003078;partial=true;product=hypothetical protein;protein_id=HBQ7391135.1;transl_table=11 ##sequence-region DAFVNP010000056.1 1 32048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000056.1 tpg region 1 32048 . + . ID=DAFVNP010000056.1:1..32048;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000056.1 tpg gene 147 1271 . - . ID=gene-L8R42_003079;Name=L8R42_003079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003079 DAFVNP010000056.1 Protein Homology CDS 147 1271 . - 0 ID=cds-HBQ7391136.1;Parent=gene-L8R42_003079;Dbxref=NCBI_GP:HBQ7391136.1;Name=HBQ7391136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=L8R42_003079;product=cytoplasmic protein;protein_id=HBQ7391136.1;transl_table=11 DAFVNP010000056.1 tpg gene 1407 2963 . + . ID=gene-L8R42_003080;Name=L8R42_003080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003080 DAFVNP010000056.1 Protein Homology CDS 1407 2963 . + 0 ID=cds-HBQ7391137.1;Parent=gene-L8R42_003080;Dbxref=NCBI_GP:HBQ7391137.1;Name=HBQ7391137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=L8R42_003080;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=HBQ7391137.1;transl_table=11 DAFVNP010000056.1 tpg gene 3228 4466 . + . ID=gene-L8R42_003081;Name=L8R42_003081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003081 DAFVNP010000056.1 Protein Homology CDS 3228 4466 . + 0 ID=cds-HBQ7391138.1;Parent=gene-L8R42_003081;Dbxref=NCBI_GP:HBQ7391138.1;Name=HBQ7391138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341216.1;locus_tag=L8R42_003081;product=serine hydroxymethyltransferase;protein_id=HBQ7391138.1;transl_table=11 DAFVNP010000056.1 tpg gene 4463 5569 . + . ID=gene-L8R42_003082;Name=L8R42_003082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003082 DAFVNP010000056.1 Protein Homology CDS 4463 5569 . + 0 ID=cds-HBQ7391139.1;Parent=gene-L8R42_003082;Dbxref=NCBI_GP:HBQ7391139.1;Name=HBQ7391139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976816.1;locus_tag=L8R42_003082;product=alanine racemase 3;protein_id=HBQ7391139.1;transl_table=11 DAFVNP010000056.1 tpg gene 5514 6995 . - . ID=gene-L8R42_003083;Name=L8R42_003083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003083 DAFVNP010000056.1 Protein Homology CDS 5514 6995 . - 0 ID=cds-HBQ7391140.1;Parent=gene-L8R42_003083;Dbxref=NCBI_GP:HBQ7391140.1;Name=HBQ7391140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090461.1;locus_tag=L8R42_003083;product=PLP-dependent aminotransferase family protein;protein_id=HBQ7391140.1;transl_table=11 DAFVNP010000056.1 tpg gene 7274 8164 . + . ID=gene-L8R42_003084;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=L8R42_003084 DAFVNP010000056.1 Protein Homology CDS 7274 8164 . + 0 ID=cds-HBQ7391141.1;Parent=gene-L8R42_003084;Dbxref=NCBI_GP:HBQ7391141.1;Name=HBQ7391141.1;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=L8R42_003084;product=methylenetetrahydrofolate reductase;protein_id=HBQ7391141.1;transl_table=11 DAFVNP010000056.1 tpg gene 8329 10509 . + . ID=gene-L8R42_003085;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=L8R42_003085 DAFVNP010000056.1 Protein Homology CDS 8329 10509 . + 0 ID=cds-HBQ7391142.1;Parent=gene-L8R42_003085;Dbxref=NCBI_GP:HBQ7391142.1;Name=HBQ7391142.1;gbkey=CDS;gene=katG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=L8R42_003085;product=catalase/peroxidase HPI;protein_id=HBQ7391142.1;transl_table=11 DAFVNP010000056.1 tpg gene 10567 11190 . - . ID=gene-L8R42_003086;Name=L8R42_003086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003086 DAFVNP010000056.1 Protein Homology CDS 10567 11190 . - 0 ID=cds-HBQ7391143.1;Parent=gene-L8R42_003086;Dbxref=NCBI_GP:HBQ7391143.1;Name=HBQ7391143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=L8R42_003086;product=DUF1287 domain-containing protein;protein_id=HBQ7391143.1;transl_table=11 DAFVNP010000056.1 tpg gene 11449 12552 . - . ID=gene-L8R42_003087;Name=L8R42_003087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003087 DAFVNP010000056.1 Protein Homology CDS 11449 12552 . - 0 ID=cds-HBQ7391144.1;Parent=gene-L8R42_003087;Dbxref=NCBI_GP:HBQ7391144.1;Name=HBQ7391144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=L8R42_003087;product=glycerol dehydrogenase;protein_id=HBQ7391144.1;transl_table=11 DAFVNP010000056.1 tpg gene 12564 13226 . - . ID=gene-L8R42_003088;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=L8R42_003088 DAFVNP010000056.1 Protein Homology CDS 12564 13226 . - 0 ID=cds-HBQ7391145.1;Parent=gene-L8R42_003088;Dbxref=NCBI_GP:HBQ7391145.1;Name=HBQ7391145.1;gbkey=CDS;gene=fsa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=L8R42_003088;product=fructose-6-phosphate aldolase;protein_id=HBQ7391145.1;transl_table=11 DAFVNP010000056.1 tpg gene 13481 14317 . - . ID=gene-L8R42_003089;Name=L8R42_003089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003089 DAFVNP010000056.1 Protein Homology CDS 13481 14317 . - 0 ID=cds-HBQ7391146.1;Parent=gene-L8R42_003089;Dbxref=NCBI_GP:HBQ7391146.1;Name=HBQ7391146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=L8R42_003089;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7391146.1;transl_table=11 DAFVNP010000056.1 tpg gene 14478 16211 . - . ID=gene-L8R42_003090;Name=L8R42_003090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003090 DAFVNP010000056.1 Protein Homology CDS 14478 16211 . - 0 ID=cds-HBQ7391147.1;Parent=gene-L8R42_003090;Dbxref=NCBI_GP:HBQ7391147.1;Name=HBQ7391147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=L8R42_003090;product=phosphoethanolamine transferase CptA;protein_id=HBQ7391147.1;transl_table=11 DAFVNP010000056.1 tpg gene 16422 19073 . - . ID=gene-L8R42_003091;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=L8R42_003091 DAFVNP010000056.1 Protein Homology CDS 16422 19073 . - 0 ID=cds-HBQ7391148.1;Parent=gene-L8R42_003091;Dbxref=NCBI_GP:HBQ7391148.1;Name=HBQ7391148.1;gbkey=CDS;gene=ppc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=L8R42_003091;product=phosphoenolpyruvate carboxylase;protein_id=HBQ7391148.1;transl_table=11 DAFVNP010000056.1 tpg gene 19465 20616 . - . ID=gene-L8R42_003092;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=L8R42_003092 DAFVNP010000056.1 Protein Homology CDS 19465 20616 . - 0 ID=cds-HBQ7391149.1;Parent=gene-L8R42_003092;Dbxref=NCBI_GP:HBQ7391149.1;Name=HBQ7391149.1;gbkey=CDS;gene=argE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=L8R42_003092;product=acetylornithine deacetylase;protein_id=HBQ7391149.1;transl_table=11 DAFVNP010000056.1 tpg gene 20705 21709 . + . ID=gene-L8R42_003093;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=L8R42_003093 DAFVNP010000056.1 Protein Homology CDS 20705 21709 . + 0 ID=cds-HBQ7391150.1;Parent=gene-L8R42_003093;Dbxref=NCBI_GP:HBQ7391150.1;Name=HBQ7391150.1;gbkey=CDS;gene=argC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=L8R42_003093;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=HBQ7391150.1;transl_table=11 DAFVNP010000056.1 tpg gene 21717 22493 . + . ID=gene-L8R42_003094;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=L8R42_003094 DAFVNP010000056.1 Protein Homology CDS 21717 22493 . + 0 ID=cds-HBQ7391151.1;Parent=gene-L8R42_003094;Dbxref=NCBI_GP:HBQ7391151.1;Name=HBQ7391151.1;gbkey=CDS;gene=argB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=L8R42_003094;product=acetylglutamate kinase;protein_id=HBQ7391151.1;transl_table=11 DAFVNP010000056.1 tpg gene 22611 23987 . + . ID=gene-L8R42_003095;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=L8R42_003095 DAFVNP010000056.1 Protein Homology CDS 22611 23987 . + 0 ID=cds-HBQ7391152.1;Parent=gene-L8R42_003095;Dbxref=NCBI_GP:HBQ7391152.1;Name=HBQ7391152.1;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=L8R42_003095;product=argininosuccinate lyase;protein_id=HBQ7391152.1;transl_table=11 DAFVNP010000056.1 tpg gene 24271 25188 . + . ID=gene-L8R42_003096;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=L8R42_003096 DAFVNP010000056.1 Protein Homology CDS 24271 25188 . + 0 ID=cds-HBQ7391153.1;Parent=gene-L8R42_003096;Dbxref=NCBI_GP:HBQ7391153.1;Name=HBQ7391153.1;gbkey=CDS;gene=oxyR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=L8R42_003096;product=DNA-binding transcriptional regulator OxyR;protein_id=HBQ7391153.1;transl_table=11 DAFVNP010000056.1 tpg gene 25171 26571 . - . ID=gene-L8R42_003097;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=L8R42_003097 DAFVNP010000056.1 Protein Homology CDS 25171 26571 . - 0 ID=cds-HBQ7391154.1;Parent=gene-L8R42_003097;Dbxref=NCBI_GP:HBQ7391154.1;Name=HBQ7391154.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=L8R42_003097;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=HBQ7391154.1;transl_table=11 DAFVNP010000056.1 tpg gene 26770 27405 . + . ID=gene-L8R42_003098;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=L8R42_003098 DAFVNP010000056.1 Protein Homology CDS 26770 27405 . + 0 ID=cds-HBQ7391155.1;Parent=gene-L8R42_003098;Dbxref=NCBI_GP:HBQ7391155.1;Name=HBQ7391155.1;gbkey=CDS;gene=fabR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=L8R42_003098;product=HTH-type transcriptional repressor FabR;protein_id=HBQ7391155.1;transl_table=11 DAFVNP010000056.1 tpg gene 27421 27780 . + . ID=gene-L8R42_003099;Name=L8R42_003099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003099 DAFVNP010000056.1 Protein Homology CDS 27421 27780 . + 0 ID=cds-HBQ7391156.1;Parent=gene-L8R42_003099;Dbxref=NCBI_GP:HBQ7391156.1;Name=HBQ7391156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=L8R42_003099;product=YijD family membrane protein;protein_id=HBQ7391156.1;transl_table=11 DAFVNP010000056.1 tpg gene 27827 28927 . - . ID=gene-L8R42_003100;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=L8R42_003100 DAFVNP010000056.1 Protein Homology CDS 27827 28927 . - 0 ID=cds-HBQ7391157.1;Parent=gene-L8R42_003100;Dbxref=NCBI_GP:HBQ7391157.1;Name=HBQ7391157.1;gbkey=CDS;gene=trmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=L8R42_003100;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=HBQ7391157.1;transl_table=11 DAFVNP010000056.1 cmsearch riboswitch 29042 29235 . + . ID=id-DAFVNP010000056.1:29042..29235;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch DAFVNP010000056.1 tpg gene 29301 31145 . + . ID=gene-L8R42_003101;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=L8R42_003101 DAFVNP010000056.1 Protein Homology CDS 29301 31145 . + 0 ID=cds-HBQ7391158.1;Parent=gene-L8R42_003101;Dbxref=NCBI_GP:HBQ7391158.1;Name=HBQ7391158.1;gbkey=CDS;gene=btuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=L8R42_003101;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=HBQ7391158.1;transl_table=11 DAFVNP010000056.1 tpg gene 31090 31941 . + . ID=gene-L8R42_003102;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=L8R42_003102 DAFVNP010000056.1 Protein Homology CDS 31090 31941 . + 0 ID=cds-HBQ7391159.1;Parent=gene-L8R42_003102;Dbxref=NCBI_GP:HBQ7391159.1;Name=HBQ7391159.1;gbkey=CDS;gene=murI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=L8R42_003102;product=glutamate racemase;protein_id=HBQ7391159.1;transl_table=11 ##sequence-region DAFVNP010000057.1 1 31783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000057.1 tpg region 1 31783 . + . ID=DAFVNP010000057.1:1..31783;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000057.1 tpg gene 14 1063 . + . ID=gene-L8R42_003103;Name=L8R42_003103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003103 DAFVNP010000057.1 Protein Homology CDS 14 1063 . + 0 ID=cds-HBQ7391160.1;Parent=gene-L8R42_003103;Dbxref=NCBI_GP:HBQ7391160.1;Name=HBQ7391160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=L8R42_003103;product=YeiH family protein;protein_id=HBQ7391160.1;transl_table=11 DAFVNP010000057.1 tpg gene 1142 1999 . + . ID=gene-L8R42_003104;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=L8R42_003104 DAFVNP010000057.1 Protein Homology CDS 1142 1999 . + 0 ID=cds-HBQ7391161.1;Parent=gene-L8R42_003104;Dbxref=NCBI_GP:HBQ7391161.1;Name=HBQ7391161.1;gbkey=CDS;gene=nfo;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=L8R42_003104;product=deoxyribonuclease IV;protein_id=HBQ7391161.1;transl_table=11 DAFVNP010000057.1 tpg gene 2064 3752 . - . ID=gene-L8R42_003105;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=L8R42_003105 DAFVNP010000057.1 Protein Homology CDS 2064 3752 . - 0 ID=cds-HBQ7391162.1;Parent=gene-L8R42_003105;Dbxref=NCBI_GP:HBQ7391162.1;Name=HBQ7391162.1;gbkey=CDS;gene=fruA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=L8R42_003105;product=PTS fructose transporter subunit IIBC;protein_id=HBQ7391162.1;transl_table=11 DAFVNP010000057.1 tpg gene 3769 4707 . - . ID=gene-L8R42_003106;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=L8R42_003106 DAFVNP010000057.1 Protein Homology CDS 3769 4707 . - 0 ID=cds-HBQ7391163.1;Parent=gene-L8R42_003106;Dbxref=NCBI_GP:HBQ7391163.1;Name=HBQ7391163.1;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=L8R42_003106;product=1-phosphofructokinase;protein_id=HBQ7391163.1;transl_table=11 DAFVNP010000057.1 tpg gene 4707 5837 . - . ID=gene-L8R42_003107;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=L8R42_003107 DAFVNP010000057.1 Protein Homology CDS 4707 5837 . - 0 ID=cds-HBQ7391164.1;Parent=gene-L8R42_003107;Dbxref=NCBI_GP:HBQ7391164.1;Name=HBQ7391164.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=L8R42_003107;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=HBQ7391164.1;transl_table=11 DAFVNP010000057.1 tpg gene 6207 7388 . + . ID=gene-L8R42_003108;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=L8R42_003108 DAFVNP010000057.1 Protein Homology CDS 6207 7388 . + 0 ID=cds-HBQ7391165.1;Parent=gene-L8R42_003108;Dbxref=NCBI_GP:HBQ7391165.1;Name=HBQ7391165.1;gbkey=CDS;gene=setB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=L8R42_003108;product=sugar efflux transporter SetB;protein_id=HBQ7391165.1;transl_table=11 DAFVNP010000057.1 tpg gene 7453 8118 . - . ID=gene-L8R42_003109;Name=L8R42_003109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003109 DAFVNP010000057.1 Protein Homology CDS 7453 8118 . - 0 ID=cds-HBQ7391166.1;Parent=gene-L8R42_003109;Dbxref=NCBI_GP:HBQ7391166.1;Name=HBQ7391166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=L8R42_003109;product=hypothetical protein;protein_id=HBQ7391166.1;transl_table=11 DAFVNP010000057.1 tpg gene 8120 8242 . - . ID=gene-L8R42_003110;Name=L8R42_003110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003110 DAFVNP010000057.1 Protein Homology CDS 8120 8242 . - 0 ID=cds-HBQ7391167.1;Parent=gene-L8R42_003110;Dbxref=NCBI_GP:HBQ7391167.1;Name=HBQ7391167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=L8R42_003110;product=hypothetical protein;protein_id=HBQ7391167.1;transl_table=11 DAFVNP010000057.1 tpg gene 8630 8884 . - . ID=gene-L8R42_003111;Name=L8R42_003111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003111 DAFVNP010000057.1 Protein Homology CDS 8630 8884 . - 0 ID=cds-HBQ7391168.1;Parent=gene-L8R42_003111;Dbxref=NCBI_GP:HBQ7391168.1;Name=HBQ7391168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=L8R42_003111;product=YkgJ family cysteine cluster protein;protein_id=HBQ7391168.1;transl_table=11 DAFVNP010000057.1 tpg gene 9208 9780 . + . ID=gene-L8R42_003112;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=L8R42_003112 DAFVNP010000057.1 Protein Homology CDS 9208 9780 . + 0 ID=cds-HBQ7391169.1;Parent=gene-L8R42_003112;Dbxref=NCBI_GP:HBQ7391169.1;Name=HBQ7391169.1;gbkey=CDS;gene=yeiP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=L8R42_003112;product=elongation factor P-like protein YeiP;protein_id=HBQ7391169.1;transl_table=11 DAFVNP010000057.1 tpg gene 9992 10978 . + . ID=gene-L8R42_003113;Name=L8R42_003113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003113 DAFVNP010000057.1 Protein Homology CDS 9992 10978 . + 0 ID=cds-HBQ7391170.1;Parent=gene-L8R42_003113;Dbxref=NCBI_GP:HBQ7391170.1;Name=HBQ7391170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=L8R42_003113;product=GTP-binding protein;protein_id=HBQ7391170.1;transl_table=11 DAFVNP010000057.1 tpg gene 11008 11727 . + . ID=gene-L8R42_003114;Name=L8R42_003114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003114 DAFVNP010000057.1 Protein Homology CDS 11008 11727 . + 0 ID=cds-HBQ7391171.1;Parent=gene-L8R42_003114;Dbxref=NCBI_GP:HBQ7391171.1;Name=HBQ7391171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=L8R42_003114;product=phosphatase PAP2 family protein;protein_id=HBQ7391171.1;transl_table=11 DAFVNP010000057.1 tpg gene 12141 12713 . + . ID=gene-L8R42_003115;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=L8R42_003115 DAFVNP010000057.1 Protein Homology CDS 12141 12713 . + 0 ID=cds-HBQ7391172.1;Parent=gene-L8R42_003115;Dbxref=NCBI_GP:HBQ7391172.1;Name=HBQ7391172.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=L8R42_003115;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=HBQ7391172.1;transl_table=11 DAFVNP010000057.1 tpg gene 13039 14595 . + . ID=gene-L8R42_003116;Name=L8R42_003116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003116 DAFVNP010000057.1 Protein Homology CDS 13039 14595 . + 0 ID=cds-HBQ7391173.1;Parent=gene-L8R42_003116;Dbxref=NCBI_GP:HBQ7391173.1;Name=HBQ7391173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=L8R42_003116;product=cyclic di-GMP phosphodiesterase;protein_id=HBQ7391173.1;transl_table=11 DAFVNP010000057.1 tpg gene 14702 16507 . + . ID=gene-L8R42_003117;Name=L8R42_003117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003117 DAFVNP010000057.1 Protein Homology CDS 14702 16507 . + 0 ID=cds-HBQ7391174.1;Parent=gene-L8R42_003117;Dbxref=NCBI_GP:HBQ7391174.1;Name=HBQ7391174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=L8R42_003117;product=ABC transporter substrate-binding protein;protein_id=HBQ7391174.1;transl_table=11 DAFVNP010000057.1 tpg gene 16517 17611 . + . ID=gene-L8R42_003118;Name=L8R42_003118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003118 DAFVNP010000057.1 Protein Homology CDS 16517 17611 . + 0 ID=cds-HBQ7391175.1;Parent=gene-L8R42_003118;Dbxref=NCBI_GP:HBQ7391175.1;Name=HBQ7391175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=L8R42_003118;product=microcin C ABC transporter permease YejB;protein_id=HBQ7391175.1;transl_table=11 DAFVNP010000057.1 tpg gene 17611 18636 . + . ID=gene-L8R42_003119;Name=L8R42_003119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003119 DAFVNP010000057.1 Protein Homology CDS 17611 18636 . + 0 ID=cds-HBQ7391176.1;Parent=gene-L8R42_003119;Dbxref=NCBI_GP:HBQ7391176.1;Name=HBQ7391176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=L8R42_003119;product=ABC transporter permease;protein_id=HBQ7391176.1;transl_table=11 DAFVNP010000057.1 tpg gene 18638 20227 . + . ID=gene-L8R42_003120;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=L8R42_003120 DAFVNP010000057.1 Protein Homology CDS 18638 20227 . + 0 ID=cds-HBQ7391177.1;Parent=gene-L8R42_003120;Dbxref=NCBI_GP:HBQ7391177.1;Name=HBQ7391177.1;gbkey=CDS;gene=yejF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=L8R42_003120;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=HBQ7391177.1;transl_table=11 DAFVNP010000057.1 tpg gene 20231 20575 . - . ID=gene-L8R42_003121;Name=L8R42_003121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003121 DAFVNP010000057.1 Protein Homology CDS 20231 20575 . - 0 ID=cds-HBQ7391178.1;Parent=gene-L8R42_003121;Dbxref=NCBI_GP:HBQ7391178.1;Name=HBQ7391178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=L8R42_003121;product=hypothetical protein;protein_id=HBQ7391178.1;transl_table=11 DAFVNP010000057.1 tpg gene 20966 22156 . - . ID=gene-L8R42_003122;Name=L8R42_003122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003122 DAFVNP010000057.1 Protein Homology CDS 20966 22156 . - 0 ID=cds-HBQ7391179.1;Parent=gene-L8R42_003122;Dbxref=NCBI_GP:HBQ7391179.1;Name=HBQ7391179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=L8R42_003122;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=HBQ7391179.1;transl_table=11 DAFVNP010000057.1 tpg gene 22184 22879 . - . ID=gene-L8R42_003123;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=L8R42_003123 DAFVNP010000057.1 Protein Homology CDS 22184 22879 . - 0 ID=cds-HBQ7391180.1;Parent=gene-L8R42_003123;Dbxref=NCBI_GP:HBQ7391180.1;Name=HBQ7391180.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=L8R42_003123;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=HBQ7391180.1;transl_table=11 DAFVNP010000057.1 tpg gene 23031 24791 . + . ID=gene-L8R42_003124;Name=L8R42_003124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003124 DAFVNP010000057.1 Protein Homology CDS 23031 24791 . + 0 ID=cds-HBQ7391181.1;Parent=gene-L8R42_003124;Dbxref=NCBI_GP:HBQ7391181.1;Name=HBQ7391181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=L8R42_003124;product=DEAD/DEAH box helicase;protein_id=HBQ7391181.1;transl_table=11 DAFVNP010000057.1 tpg gene 24916 25200 . + . ID=gene-L8R42_003125;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=L8R42_003125 DAFVNP010000057.1 Protein Homology CDS 24916 25200 . + 0 ID=cds-HBQ7391182.1;Parent=gene-L8R42_003125;Dbxref=NCBI_GP:HBQ7391182.1;Name=HBQ7391182.1;gbkey=CDS;gene=rplY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=L8R42_003125;product=50S ribosomal protein L25;protein_id=HBQ7391182.1;transl_table=11 DAFVNP010000057.1 tpg gene 25309 25929 . - . ID=gene-L8R42_003126;Name=L8R42_003126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003126 DAFVNP010000057.1 Protein Homology CDS 25309 25929 . - 0 ID=cds-HBQ7391183.1;Parent=gene-L8R42_003126;Dbxref=NCBI_GP:HBQ7391183.1;Name=HBQ7391183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=L8R42_003126;product=hypothetical protein;protein_id=HBQ7391183.1;transl_table=11 DAFVNP010000057.1 tpg gene 25957 26964 . - . ID=gene-L8R42_003127;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=L8R42_003127 DAFVNP010000057.1 Protein Homology CDS 25957 26964 . - 0 ID=cds-HBQ7391184.1;Parent=gene-L8R42_003127;Dbxref=NCBI_GP:HBQ7391184.1;Name=HBQ7391184.1;gbkey=CDS;gene=yejK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=L8R42_003127;product=nucleoid-associated protein YejK;protein_id=HBQ7391184.1;transl_table=11 DAFVNP010000057.1 tpg gene 27144 27371 . + . ID=gene-L8R42_003128;Name=L8R42_003128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003128 DAFVNP010000057.1 Protein Homology CDS 27144 27371 . + 0 ID=cds-HBQ7391185.1;Parent=gene-L8R42_003128;Dbxref=NCBI_GP:HBQ7391185.1;Name=HBQ7391185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=L8R42_003128;product=YejL family protein;protein_id=HBQ7391185.1;transl_table=11 DAFVNP010000057.1 tpg gene 27403 29163 . + . ID=gene-L8R42_003129;Name=pbgA;gbkey=Gene;gene=pbgA;gene_biotype=protein_coding;locus_tag=L8R42_003129 DAFVNP010000057.1 Protein Homology CDS 27403 29163 . + 0 ID=cds-HBQ7391186.1;Parent=gene-L8R42_003129;Dbxref=NCBI_GP:HBQ7391186.1;Name=HBQ7391186.1;gbkey=CDS;gene=pbgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=L8R42_003129;product=cardiolipin transport protein PbgA;protein_id=HBQ7391186.1;transl_table=11 DAFVNP010000057.1 tpg gene 29237 29313 . + . ID=gene-L8R42_003130;Name=L8R42_003130;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_003130 DAFVNP010000057.1 tRNAscan-SE tRNA 29237 29313 . + . ID=rna-L8R42_003130;Parent=gene-L8R42_003130;anticodon=(pos:29271..29273);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003130;product=tRNA-Pro DAFVNP010000057.1 tRNAscan-SE exon 29237 29313 . + . ID=exon-L8R42_003130-1;Parent=rna-L8R42_003130;anticodon=(pos:29271..29273);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003130;product=tRNA-Pro DAFVNP010000057.1 tpg gene 29355 29558 . + . ID=gene-L8R42_003131;Name=L8R42_003131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003131 DAFVNP010000057.1 Protein Homology CDS 29355 29558 . + 0 ID=cds-HBQ7391187.1;Parent=gene-L8R42_003131;Dbxref=NCBI_GP:HBQ7391187.1;Name=HBQ7391187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=L8R42_003131;product=virulence protein MsgA;protein_id=HBQ7391187.1;transl_table=11 DAFVNP010000057.1 tpg gene 29750 30313 . - . ID=gene-L8R42_003132;Name=L8R42_003132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003132 DAFVNP010000057.1 Protein Homology CDS 29750 30313 . - 0 ID=cds-HBQ7391188.1;Parent=gene-L8R42_003132;Dbxref=NCBI_GP:HBQ7391188.1;Name=HBQ7391188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=L8R42_003132;product=acyloxyacyl hydrolase;protein_id=HBQ7391188.1;transl_table=11 DAFVNP010000057.1 tpg gene 31131 31778 . + . ID=gene-L8R42_003133;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=L8R42_003133 DAFVNP010000057.1 Protein Homology CDS 31131 31778 . + 0 ID=cds-HBQ7391189.1;Parent=gene-L8R42_003133;Dbxref=NCBI_GP:HBQ7391189.1;Name=HBQ7391189.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=L8R42_003133;product=nitrate/nitrite response regulator protein NarP;protein_id=HBQ7391189.1;transl_table=11 ##sequence-region DAFVNP010000058.1 1 31454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000058.1 tpg region 1 31454 . + . ID=DAFVNP010000058.1:1..31454;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000058.1 tpg gene 121 1410 . + . ID=gene-L8R42_003134;Name=L8R42_003134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003134 DAFVNP010000058.1 Protein Homology CDS 121 1410 . + 0 ID=cds-HBQ7391190.1;Parent=gene-L8R42_003134;Dbxref=NCBI_GP:HBQ7391190.1;Name=HBQ7391190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=L8R42_003134;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=HBQ7391190.1;transl_table=11 DAFVNP010000058.1 tpg gene 1407 2873 . + . ID=gene-L8R42_003135;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=L8R42_003135 DAFVNP010000058.1 Protein Homology CDS 1407 2873 . + 0 ID=cds-HBQ7391191.1;Parent=gene-L8R42_003135;Dbxref=NCBI_GP:HBQ7391191.1;Name=HBQ7391191.1;gbkey=CDS;gene=hpaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=L8R42_003135;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=HBQ7391191.1;transl_table=11 DAFVNP010000058.1 tpg gene 2875 3726 . + . ID=gene-L8R42_003136;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=L8R42_003136 DAFVNP010000058.1 Protein Homology CDS 2875 3726 . + 0 ID=cds-HBQ7391192.1;Parent=gene-L8R42_003136;Dbxref=NCBI_GP:HBQ7391192.1;Name=HBQ7391192.1;gbkey=CDS;gene=hpaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=L8R42_003136;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=HBQ7391192.1;transl_table=11 DAFVNP010000058.1 tpg gene 3736 4116 . + . ID=gene-L8R42_003137;Name=L8R42_003137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003137 DAFVNP010000058.1 Protein Homology CDS 3736 4116 . + 0 ID=cds-HBQ7391193.1;Parent=gene-L8R42_003137;Dbxref=NCBI_GP:HBQ7391193.1;Name=HBQ7391193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=L8R42_003137;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=HBQ7391193.1;transl_table=11 DAFVNP010000058.1 tpg gene 4260 5063 . + . ID=gene-L8R42_003138;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=L8R42_003138 DAFVNP010000058.1 Protein Homology CDS 4260 5063 . + 0 ID=cds-HBQ7391194.1;Parent=gene-L8R42_003138;Dbxref=NCBI_GP:HBQ7391194.1;Name=HBQ7391194.1;gbkey=CDS;gene=hpaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=L8R42_003138;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=HBQ7391194.1;transl_table=11 DAFVNP010000058.1 tpg gene 5074 5865 . + . ID=gene-L8R42_003139;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=L8R42_003139 DAFVNP010000058.1 Protein Homology CDS 5074 5865 . + 0 ID=cds-HBQ7391195.1;Parent=gene-L8R42_003139;Dbxref=NCBI_GP:HBQ7391195.1;Name=HBQ7391195.1;gbkey=CDS;gene=hpaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=L8R42_003139;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=HBQ7391195.1;transl_table=11 DAFVNP010000058.1 tpg gene 5938 7314 . + . ID=gene-L8R42_003140;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=L8R42_003140 DAFVNP010000058.1 Protein Homology CDS 5938 7314 . + 0 ID=cds-HBQ7391196.1;Parent=gene-L8R42_003140;Dbxref=NCBI_GP:HBQ7391196.1;Name=HBQ7391196.1;gbkey=CDS;gene=hpaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=L8R42_003140;product=4-hydroxyphenylacetate permease;protein_id=HBQ7391196.1;transl_table=11 DAFVNP010000058.1 tpg gene 7324 8220 . + . ID=gene-L8R42_003141;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=L8R42_003141 DAFVNP010000058.1 Protein Homology CDS 7324 8220 . + 0 ID=cds-HBQ7391197.1;Parent=gene-L8R42_003141;Dbxref=NCBI_GP:HBQ7391197.1;Name=HBQ7391197.1;gbkey=CDS;gene=hpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=L8R42_003141;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=HBQ7391197.1;transl_table=11 DAFVNP010000058.1 tpg gene 8234 9172 . + . ID=gene-L8R42_003142;Name=L8R42_003142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003142 DAFVNP010000058.1 Protein Homology CDS 8234 9172 . + 0 ID=cds-HBQ7391198.1;Parent=gene-L8R42_003142;Dbxref=NCBI_GP:HBQ7391198.1;Name=HBQ7391198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=L8R42_003142;product=MBL fold metallo-hydrolase;protein_id=HBQ7391198.1;transl_table=11 DAFVNP010000058.1 tpg gene 9580 9942 . - . ID=gene-L8R42_003143;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=L8R42_003143 DAFVNP010000058.1 Protein Homology CDS 9580 9942 . - 0 ID=cds-HBQ7391199.1;Parent=gene-L8R42_003143;Dbxref=NCBI_GP:HBQ7391199.1;Name=HBQ7391199.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=L8R42_003143;product=anti-adapter protein IraM;protein_id=HBQ7391199.1;transl_table=11 DAFVNP010000058.1 tpg gene 10596 10901 . - . ID=gene-L8R42_003144;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=L8R42_003144 DAFVNP010000058.1 Protein Homology CDS 10596 10901 . - 0 ID=cds-HBQ7391200.1;Parent=gene-L8R42_003144;Dbxref=NCBI_GP:HBQ7391200.1;Name=HBQ7391200.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=L8R42_003144;product=chaperone modulator CbpM;protein_id=HBQ7391200.1;transl_table=11 DAFVNP010000058.1 tpg gene 10901 11821 . - . ID=gene-L8R42_003145;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=L8R42_003145 DAFVNP010000058.1 Protein Homology CDS 10901 11821 . - 0 ID=cds-HBQ7391201.1;Parent=gene-L8R42_003145;Dbxref=NCBI_GP:HBQ7391201.1;Name=HBQ7391201.1;gbkey=CDS;gene=cbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=L8R42_003145;product=curved DNA-binding protein;protein_id=HBQ7391201.1;transl_table=11 DAFVNP010000058.1 tpg gene 12057 12419 . + . ID=gene-L8R42_003146;Name=L8R42_003146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003146 DAFVNP010000058.1 Protein Homology CDS 12057 12419 . + 0 ID=cds-HBQ7391202.1;Parent=gene-L8R42_003146;Dbxref=NCBI_GP:HBQ7391202.1;Name=HBQ7391202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=L8R42_003146;product=copper resistance protein;protein_id=HBQ7391202.1;transl_table=11 DAFVNP010000058.1 tpg gene 12468 14354 . + . ID=gene-L8R42_003147;Name=L8R42_003147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003147 DAFVNP010000058.1 Protein Homology CDS 12468 14354 . + 0 ID=cds-HBQ7391203.1;Parent=gene-L8R42_003147;Dbxref=NCBI_GP:HBQ7391203.1;Name=HBQ7391203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=L8R42_003147;product=thioredoxin family protein;protein_id=HBQ7391203.1;transl_table=11 DAFVNP010000058.1 tpg gene 14351 14974 . + . ID=gene-L8R42_003148;Name=L8R42_003148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003148 DAFVNP010000058.1 Protein Homology CDS 14351 14974 . + 0 ID=cds-HBQ7391204.1;Parent=gene-L8R42_003148;Dbxref=NCBI_GP:HBQ7391204.1;Name=HBQ7391204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=L8R42_003148;product=DsbA family protein;protein_id=HBQ7391204.1;transl_table=11 DAFVNP010000058.1 tpg gene 14964 15470 . + . ID=gene-L8R42_003149;Name=L8R42_003149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003149 DAFVNP010000058.1 Protein Homology CDS 14964 15470 . + 0 ID=cds-HBQ7391205.1;Parent=gene-L8R42_003149;Dbxref=NCBI_GP:HBQ7391205.1;Name=HBQ7391205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=L8R42_003149;product=protein disulfide oxidoreductase;protein_id=HBQ7391205.1;transl_table=11 DAFVNP010000058.1 tpg gene 15603 16844 . + . ID=gene-L8R42_003150;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=L8R42_003150 DAFVNP010000058.1 Protein Homology CDS 15603 16844 . + 0 ID=cds-HBQ7391206.1;Parent=gene-L8R42_003150;Dbxref=NCBI_GP:HBQ7391206.1;Name=HBQ7391206.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=L8R42_003150;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=HBQ7391206.1;transl_table=11 DAFVNP010000058.1 tpg gene 16878 17105 . - . ID=gene-L8R42_003151;Name=L8R42_003151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003151 DAFVNP010000058.1 Protein Homology CDS 16878 17105 . - 0 ID=cds-HBQ7391207.1;Parent=gene-L8R42_003151;Dbxref=NCBI_GP:HBQ7391207.1;Name=HBQ7391207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=L8R42_003151;product=YccJ family protein;protein_id=HBQ7391207.1;transl_table=11 DAFVNP010000058.1 tpg gene 17126 17722 . - . ID=gene-L8R42_003152;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=L8R42_003152 DAFVNP010000058.1 Protein Homology CDS 17126 17722 . - 0 ID=cds-HBQ7391208.1;Parent=gene-L8R42_003152;Dbxref=NCBI_GP:HBQ7391208.1;Name=HBQ7391208.1;gbkey=CDS;gene=wrbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=L8R42_003152;product=NAD(P)H:quinone oxidoreductase;protein_id=HBQ7391208.1;transl_table=11 DAFVNP010000058.1 tpg gene 18107 18274 . + . ID=gene-L8R42_003153;Name=L8R42_003153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003153 DAFVNP010000058.1 Protein Homology CDS 18107 18274 . + 0 ID=cds-HBQ7391209.1;Parent=gene-L8R42_003153;Dbxref=NCBI_GP:HBQ7391209.1;Name=HBQ7391209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=L8R42_003153;product=general stress protein;protein_id=HBQ7391209.1;transl_table=11 DAFVNP010000058.1 tpg gene 18411 19049 . + . ID=gene-L8R42_003154;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=L8R42_003154 DAFVNP010000058.1 Protein Homology CDS 18411 19049 . + 0 ID=cds-HBQ7391210.1;Parent=gene-L8R42_003154;Dbxref=NCBI_GP:HBQ7391210.1;Name=HBQ7391210.1;gbkey=CDS;gene=rutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=L8R42_003154;product=HTH-type transcriptional regulator RutR;protein_id=HBQ7391210.1;transl_table=11 DAFVNP010000058.1 tpg gene 19046 19441 . - . ID=gene-L8R42_003155;Name=L8R42_003155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003155 DAFVNP010000058.1 Protein Homology CDS 19046 19441 . - 0 ID=cds-HBQ7391211.1;Parent=gene-L8R42_003155;Dbxref=NCBI_GP:HBQ7391211.1;Name=HBQ7391211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=L8R42_003155;product=lysozyme inhibitor LprI family protein;protein_id=HBQ7391211.1;transl_table=11 DAFVNP010000058.1 tpg gene 19500 23462 . - . ID=gene-L8R42_003156;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=L8R42_003156 DAFVNP010000058.1 Protein Homology CDS 19500 23462 . - 0 ID=cds-HBQ7391212.1;Parent=gene-L8R42_003156;Dbxref=NCBI_GP:HBQ7391212.1;Name=HBQ7391212.1;gbkey=CDS;gene=putA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=L8R42_003156;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=HBQ7391212.1;transl_table=11 DAFVNP010000058.1 tpg gene 23884 25392 . + . ID=gene-L8R42_003157;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=L8R42_003157 DAFVNP010000058.1 Protein Homology CDS 23884 25392 . + 0 ID=cds-HBQ7391213.1;Parent=gene-L8R42_003157;Dbxref=NCBI_GP:HBQ7391213.1;Name=HBQ7391213.1;gbkey=CDS;gene=putP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=L8R42_003157;product=sodium/proline symporter PutP;protein_id=HBQ7391213.1;transl_table=11 DAFVNP010000058.1 tpg gene 26285 27073 . + . ID=gene-L8R42_003158;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=L8R42_003158 DAFVNP010000058.1 Protein Homology CDS 26285 27073 . + 0 ID=cds-HBQ7391214.1;Parent=gene-L8R42_003158;Dbxref=NCBI_GP:HBQ7391214.1;Name=HBQ7391214.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=L8R42_003158;product=phosphate starvation-inducible protein PhoH;protein_id=HBQ7391214.1;transl_table=11 DAFVNP010000058.1 tpg gene 27179 28060 . - . ID=gene-L8R42_003159;Name=L8R42_003159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003159 DAFVNP010000058.1 Protein Homology CDS 27179 28060 . - 0 ID=cds-HBQ7391215.1;Parent=gene-L8R42_003159;Dbxref=NCBI_GP:HBQ7391215.1;Name=HBQ7391215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=L8R42_003159;product=MurR/RpiR family transcriptional regulator;protein_id=HBQ7391215.1;transl_table=11 DAFVNP010000058.1 tpg gene 28346 29842 . - . ID=gene-L8R42_003160;Name=L8R42_003160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003160 DAFVNP010000058.1 Protein Homology CDS 28346 29842 . - 0 ID=cds-HBQ7391216.1;Parent=gene-L8R42_003160;Dbxref=NCBI_GP:HBQ7391216.1;Name=HBQ7391216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=L8R42_003160;product=sodium:solute symporter;protein_id=HBQ7391216.1;transl_table=11 DAFVNP010000058.1 tpg gene 30171 30851 . - . ID=gene-L8R42_003161;Name=L8R42_003161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003161 DAFVNP010000058.1 Protein Homology CDS 30171 30851 . - 0 ID=cds-HBQ7391217.1;Parent=gene-L8R42_003161;Dbxref=NCBI_GP:HBQ7391217.1;Name=HBQ7391217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=L8R42_003161;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=HBQ7391217.1;transl_table=11 ##sequence-region DAFVNP010000059.1 1 30980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000059.1 tpg region 1 30980 . + . ID=DAFVNP010000059.1:1..30980;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000059.1 tpg gene 15 581 . + . ID=gene-L8R42_003162;Name=L8R42_003162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003162 DAFVNP010000059.1 Protein Homology CDS 15 581 . + 0 ID=cds-HBQ7391218.1;Parent=gene-L8R42_003162;Dbxref=NCBI_GP:HBQ7391218.1;Name=HBQ7391218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694495.1;locus_tag=L8R42_003162;product=fimbrial protein;protein_id=HBQ7391218.1;transl_table=11 DAFVNP010000059.1 tpg gene 668 1420 . + . ID=gene-L8R42_003163;Name=L8R42_003163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003163 DAFVNP010000059.1 Protein Homology CDS 668 1420 . + 0 ID=cds-HBQ7391219.1;Parent=gene-L8R42_003163;Dbxref=NCBI_GP:HBQ7391219.1;Name=HBQ7391219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248438.1;locus_tag=L8R42_003163;product=fimbrial chaperone;protein_id=HBQ7391219.1;transl_table=11 DAFVNP010000059.1 tpg gene 1488 4085 . + . ID=gene-L8R42_003164;Name=L8R42_003164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003164 DAFVNP010000059.1 Protein Homology CDS 1488 4085 . + 0 ID=cds-HBQ7391220.1;Parent=gene-L8R42_003164;Dbxref=NCBI_GP:HBQ7391220.1;Name=HBQ7391220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441536.1;locus_tag=L8R42_003164;product=outer membrane usher protein;protein_id=HBQ7391220.1;transl_table=11 DAFVNP010000059.1 tpg gene 4108 4692 . + . ID=gene-L8R42_003165;Name=L8R42_003165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003165 DAFVNP010000059.1 Protein Homology CDS 4108 4692 . + 0 ID=cds-HBQ7391221.1;Parent=gene-L8R42_003165;Dbxref=NCBI_GP:HBQ7391221.1;Name=HBQ7391221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001267117.1;locus_tag=L8R42_003165;product=fimbrial protein;protein_id=HBQ7391221.1;transl_table=11 DAFVNP010000059.1 tpg gene 4719 5276 . + . ID=gene-L8R42_003166;Name=L8R42_003166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003166 DAFVNP010000059.1 Protein Homology CDS 4719 5276 . + 0 ID=cds-HBQ7391222.1;Parent=gene-L8R42_003166;Dbxref=NCBI_GP:HBQ7391222.1;Name=HBQ7391222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504756.1;locus_tag=L8R42_003166;product=fimbrial protein;protein_id=HBQ7391222.1;transl_table=11 DAFVNP010000059.1 tpg gene 5295 5894 . + . ID=gene-L8R42_003167;Name=L8R42_003167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003167 DAFVNP010000059.1 Protein Homology CDS 5295 5894 . + 0 ID=cds-HBQ7391223.1;Parent=gene-L8R42_003167;Dbxref=NCBI_GP:HBQ7391223.1;Name=HBQ7391223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186618.1;locus_tag=L8R42_003167;product=fimbrial protein;protein_id=HBQ7391223.1;transl_table=11 DAFVNP010000059.1 tpg gene 5906 6967 . + . ID=gene-L8R42_003168;Name=L8R42_003168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003168 DAFVNP010000059.1 Protein Homology CDS 5906 6967 . + 0 ID=cds-HBQ7391224.1;Parent=gene-L8R42_003168;Dbxref=NCBI_GP:HBQ7391224.1;Name=HBQ7391224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506595.1;locus_tag=L8R42_003168;product=fimbrial protein StkG;protein_id=HBQ7391224.1;transl_table=11 DAFVNP010000059.1 tpg gene 6969 8198 . - . ID=gene-L8R42_003169;Name=L8R42_003169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003169 DAFVNP010000059.1 Protein Homology CDS 6969 8198 . - 0 ID=cds-HBQ7391225.1;Parent=gene-L8R42_003169;Dbxref=NCBI_GP:HBQ7391225.1;Name=HBQ7391225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=L8R42_003169;product=polysaccharide deacetylase family protein;protein_id=HBQ7391225.1;transl_table=11 DAFVNP010000059.1 tpg gene 8260 8700 . - . ID=gene-L8R42_003170;Name=L8R42_003170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003170 DAFVNP010000059.1 Protein Homology CDS 8260 8700 . - 0 ID=cds-HBQ7391226.1;Parent=gene-L8R42_003170;Dbxref=NCBI_GP:HBQ7391226.1;Name=HBQ7391226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=L8R42_003170;product=PTS sugar transporter subunit IIA;protein_id=HBQ7391226.1;transl_table=11 DAFVNP010000059.1 tpg gene 9070 9603 . + . ID=gene-L8R42_003171;Name=L8R42_003171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003171 DAFVNP010000059.1 Protein Homology CDS 9070 9603 . + 0 ID=cds-HBQ7391227.1;Parent=gene-L8R42_003171;Dbxref=NCBI_GP:HBQ7391227.1;Name=HBQ7391227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=L8R42_003171;product=fimbrial protein;protein_id=HBQ7391227.1;transl_table=11 DAFVNP010000059.1 tpg gene 9651 10334 . + . ID=gene-L8R42_003172;Name=L8R42_003172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003172 DAFVNP010000059.1 Protein Homology CDS 9651 10334 . + 0 ID=cds-HBQ7391228.1;Parent=gene-L8R42_003172;Dbxref=NCBI_GP:HBQ7391228.1;Name=HBQ7391228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=L8R42_003172;product=fimbria/pilus periplasmic chaperone;protein_id=HBQ7391228.1;transl_table=11 DAFVNP010000059.1 tpg gene 10361 12907 . + . ID=gene-L8R42_003173;Name=L8R42_003173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003173 DAFVNP010000059.1 Protein Homology CDS 10361 12907 . + 0 ID=cds-HBQ7391229.1;Parent=gene-L8R42_003173;Dbxref=NCBI_GP:HBQ7391229.1;Name=HBQ7391229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=L8R42_003173;product=fimbrial outer membrane usher protein;protein_id=HBQ7391229.1;transl_table=11 DAFVNP010000059.1 tpg gene 12916 13992 . + . ID=gene-L8R42_003174;Name=L8R42_003174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003174 DAFVNP010000059.1 Protein Homology CDS 12916 13992 . + 0 ID=cds-HBQ7391230.1;Parent=gene-L8R42_003174;Dbxref=NCBI_GP:HBQ7391230.1;Name=HBQ7391230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=L8R42_003174;product=fimbrial protein;protein_id=HBQ7391230.1;transl_table=11 DAFVNP010000059.1 tpg gene 14105 14875 . - . ID=gene-L8R42_003175;Name=L8R42_003175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003175 DAFVNP010000059.1 Protein Homology CDS 14105 14875 . - 0 ID=cds-HBQ7391231.1;Parent=gene-L8R42_003175;Dbxref=NCBI_GP:HBQ7391231.1;Name=HBQ7391231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=L8R42_003175;product=ABC transporter permease;protein_id=HBQ7391231.1;transl_table=11 DAFVNP010000059.1 tpg gene 14872 15798 . - . ID=gene-L8R42_003176;Name=L8R42_003176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003176 DAFVNP010000059.1 Protein Homology CDS 14872 15798 . - 0 ID=cds-HBQ7391232.1;Parent=gene-L8R42_003176;Dbxref=NCBI_GP:HBQ7391232.1;Name=HBQ7391232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=L8R42_003176;product=ABC transporter ATP-binding protein;protein_id=HBQ7391232.1;transl_table=11 DAFVNP010000059.1 tpg gene 15907 16569 . + . ID=gene-L8R42_003177;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=L8R42_003177 DAFVNP010000059.1 Protein Homology CDS 15907 16569 . + 0 ID=cds-HBQ7391233.1;Parent=gene-L8R42_003177;Dbxref=NCBI_GP:HBQ7391233.1;Name=HBQ7391233.1;gbkey=CDS;gene=can;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=L8R42_003177;product=carbonate dehydratase;protein_id=HBQ7391233.1;transl_table=11 DAFVNP010000059.1 tpg gene 16627 17163 . - . ID=gene-L8R42_003178;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=L8R42_003178 DAFVNP010000059.1 Protein Homology CDS 16627 17163 . - 0 ID=cds-HBQ7391234.1;Parent=gene-L8R42_003178;Dbxref=NCBI_GP:HBQ7391234.1;Name=HBQ7391234.1;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=L8R42_003178;product=hypoxanthine phosphoribosyltransferase;protein_id=HBQ7391234.1;transl_table=11 DAFVNP010000059.1 tpg gene 17369 19759 . + . ID=gene-L8R42_003179;Name=L8R42_003179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003179 DAFVNP010000059.1 Protein Homology CDS 17369 19759 . + 0 ID=cds-HBQ7391235.1;Parent=gene-L8R42_003179;Dbxref=NCBI_GP:HBQ7391235.1;Name=HBQ7391235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=L8R42_003179;product=pyrroloquinoline quinone-dependent dehydrogenase;protein_id=HBQ7391235.1;transl_table=11 DAFVNP010000059.1 tpg gene 19837 21447 . - . ID=gene-L8R42_003180;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=L8R42_003180 DAFVNP010000059.1 Protein Homology CDS 19837 21447 . - 0 ID=cds-HBQ7391236.1;Parent=gene-L8R42_003180;Dbxref=NCBI_GP:HBQ7391236.1;Name=HBQ7391236.1;gbkey=CDS;gene=cueO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=L8R42_003180;product=multicopper oxidase CueO;protein_id=HBQ7391236.1;transl_table=11 DAFVNP010000059.1 tpg gene 21649 21996 . + . ID=gene-L8R42_003181;Name=L8R42_003181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003181 DAFVNP010000059.1 Protein Homology CDS 21649 21996 . + 0 ID=cds-HBQ7391237.1;Parent=gene-L8R42_003181;Dbxref=NCBI_GP:HBQ7391237.1;Name=HBQ7391237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=L8R42_003181;product=YacC family pilotin-like protein;protein_id=HBQ7391237.1;transl_table=11 DAFVNP010000059.1 tpg gene 22103 22972 . + . ID=gene-L8R42_003182;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=L8R42_003182 DAFVNP010000059.1 Protein Homology CDS 22103 22972 . + 0 ID=cds-HBQ7391238.1;Parent=gene-L8R42_003182;Dbxref=NCBI_GP:HBQ7391238.1;Name=HBQ7391238.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=L8R42_003182;product=polyamine aminopropyltransferase;protein_id=HBQ7391238.1;transl_table=11 DAFVNP010000059.1 tpg gene 22993 23787 . + . ID=gene-L8R42_003183;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=L8R42_003183 DAFVNP010000059.1 Protein Homology CDS 22993 23787 . + 0 ID=cds-HBQ7391239.1;Parent=gene-L8R42_003183;Dbxref=NCBI_GP:HBQ7391239.1;Name=HBQ7391239.1;gbkey=CDS;gene=speD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=L8R42_003183;product=adenosylmethionine decarboxylase;protein_id=HBQ7391239.1;transl_table=11 DAFVNP010000059.1 tpg gene 23817 24584 . - . ID=gene-L8R42_003184;Name=L8R42_003184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003184 DAFVNP010000059.1 Protein Homology CDS 23817 24584 . - 0 ID=cds-HBQ7391240.1;Parent=gene-L8R42_003184;Dbxref=NCBI_GP:HBQ7391240.1;Name=HBQ7391240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=L8R42_003184;product=DeoR/GlpR transcriptional regulator;protein_id=HBQ7391240.1;transl_table=11 DAFVNP010000059.1 tpg gene 24594 25577 . - . ID=gene-L8R42_003185;Name=L8R42_003185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003185 DAFVNP010000059.1 Protein Homology CDS 24594 25577 . - 0 ID=cds-HBQ7391241.1;Parent=gene-L8R42_003185;Dbxref=NCBI_GP:HBQ7391241.1;Name=HBQ7391241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=L8R42_003185;product=D-threonate 4-phosphate dehydrogenase;protein_id=HBQ7391241.1;transl_table=11 DAFVNP010000059.1 tpg gene 25567 26838 . - . ID=gene-L8R42_003186;Name=L8R42_003186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003186 DAFVNP010000059.1 Protein Homology CDS 25567 26838 . - 0 ID=cds-HBQ7391242.1;Parent=gene-L8R42_003186;Dbxref=NCBI_GP:HBQ7391242.1;Name=HBQ7391242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=L8R42_003186;product=D-threonate kinase;protein_id=HBQ7391242.1;transl_table=11 DAFVNP010000059.1 tpg gene 26835 27788 . - . ID=gene-L8R42_003187;Name=L8R42_003187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003187 DAFVNP010000059.1 Protein Homology CDS 26835 27788 . - 0 ID=cds-HBQ7391243.1;Parent=gene-L8R42_003187;Dbxref=NCBI_GP:HBQ7391243.1;Name=HBQ7391243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=L8R42_003187;product=2-keto-3-deoxygluconate permease 1;protein_id=HBQ7391243.1;transl_table=11 DAFVNP010000059.1 tpg gene 28023 28385 . - . ID=gene-L8R42_003188;Name=L8R42_003188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003188 DAFVNP010000059.1 Protein Homology CDS 28023 28385 . - 0 ID=cds-HBQ7391244.1;Parent=gene-L8R42_003188;Dbxref=NCBI_GP:HBQ7391244.1;Name=HBQ7391244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=L8R42_003188;product=YacL family protein;protein_id=HBQ7391244.1;transl_table=11 DAFVNP010000059.1 tpg gene 28656 28979 . + . ID=gene-L8R42_003189;Name=L8R42_003189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003189 DAFVNP010000059.1 Protein Homology CDS 28656 28979 . + 0 ID=cds-HBQ7391245.1;Parent=gene-L8R42_003189;Dbxref=NCBI_GP:HBQ7391245.1;Name=HBQ7391245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=L8R42_003189;product=phosphotyrosine protein phosphatase;protein_id=HBQ7391245.1;transl_table=11 DAFVNP010000059.1 tpg gene 29389 29853 . + . ID=gene-L8R42_003190;Name=L8R42_003190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003190 DAFVNP010000059.1 Protein Homology CDS 29389 29853 . + 0 ID=cds-HBQ7391246.1;Parent=gene-L8R42_003190;Dbxref=NCBI_GP:HBQ7391246.1;Name=HBQ7391246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=L8R42_003190;product=hypothetical protein;protein_id=HBQ7391246.1;transl_table=11 DAFVNP010000059.1 tpg gene 29893 30072 . - . ID=gene-L8R42_003191;Name=L8R42_003191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003191 DAFVNP010000059.1 GeneMarkS-2+ CDS 29893 30072 . - 0 ID=cds-HBQ7391247.1;Parent=gene-L8R42_003191;Dbxref=NCBI_GP:HBQ7391247.1;Name=HBQ7391247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_003191;product=hypothetical protein;protein_id=HBQ7391247.1;transl_table=11 DAFVNP010000059.1 tpg gene 30074 30980 . - . ID=gene-L8R42_003192;Name=L8R42_003192;end_range=30980,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003192;partial=true DAFVNP010000059.1 Protein Homology CDS 30074 30980 . - 1 ID=cds-HBQ7391248.1;Parent=gene-L8R42_003192;Dbxref=NCBI_GP:HBQ7391248.1;Name=HBQ7391248.1;end_range=30980,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441546.1;locus_tag=L8R42_003192;partial=true;product=DUF4431 domain-containing protein;protein_id=HBQ7391248.1;transl_table=11 ##sequence-region DAFVNP010000060.1 1 30443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000060.1 tpg region 1 30443 . + . ID=DAFVNP010000060.1:1..30443;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000060.1 tpg gene 236 1399 . + . ID=gene-L8R42_003193;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=L8R42_003193 DAFVNP010000060.1 Protein Homology CDS 236 1399 . + 0 ID=cds-HBQ7391249.1;Parent=gene-L8R42_003193;Dbxref=NCBI_GP:HBQ7391249.1;Name=HBQ7391249.1;gbkey=CDS;gene=yqhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=L8R42_003193;product=alcohol dehydrogenase;protein_id=HBQ7391249.1;transl_table=11 DAFVNP010000060.1 tpg gene 1505 2332 . + . ID=gene-L8R42_003194;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=L8R42_003194 DAFVNP010000060.1 Protein Homology CDS 1505 2332 . + 0 ID=cds-HBQ7391250.1;Parent=gene-L8R42_003194;Dbxref=NCBI_GP:HBQ7391250.1;Name=HBQ7391250.1;gbkey=CDS;gene=dkgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=L8R42_003194;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=HBQ7391250.1;transl_table=11 DAFVNP010000060.1 tpg gene 2529 3983 . + . ID=gene-L8R42_003195;Name=L8R42_003195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003195 DAFVNP010000060.1 Protein Homology CDS 2529 3983 . + 0 ID=cds-HBQ7391251.1;Parent=gene-L8R42_003195;Dbxref=NCBI_GP:HBQ7391251.1;Name=HBQ7391251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818496.1;locus_tag=L8R42_003195;product=DASS family sodium-coupled anion symporter;protein_id=HBQ7391251.1;transl_table=11 DAFVNP010000060.1 tpg gene 4027 4482 . + . ID=gene-L8R42_003196;Name=L8R42_003196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003196 DAFVNP010000060.1 Protein Homology CDS 4027 4482 . + 0 ID=cds-HBQ7391252.1;Parent=gene-L8R42_003196;Dbxref=NCBI_GP:HBQ7391252.1;Name=HBQ7391252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=L8R42_003196;product=HIT family protein;protein_id=HBQ7391252.1;transl_table=11 DAFVNP010000060.1 tpg gene 4640 4834 . - . ID=gene-L8R42_003197;Name=L8R42_003197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003197 DAFVNP010000060.1 GeneMarkS-2+ CDS 4640 4834 . - 0 ID=cds-HBQ7391253.1;Parent=gene-L8R42_003197;Dbxref=NCBI_GP:HBQ7391253.1;Name=HBQ7391253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_003197;product=hypothetical protein;protein_id=HBQ7391253.1;transl_table=11 DAFVNP010000060.1 tpg gene 5037 7208 . - . ID=gene-L8R42_003198;Name=L8R42_003198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003198 DAFVNP010000060.1 Protein Homology CDS 5037 7208 . - 0 ID=cds-HBQ7391254.1;Parent=gene-L8R42_003198;Dbxref=NCBI_GP:HBQ7391254.1;Name=HBQ7391254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=L8R42_003198;product=YgiQ family radical SAM protein;protein_id=HBQ7391254.1;transl_table=11 DAFVNP010000060.1 tpg gene 7696 8679 . + . ID=gene-L8R42_003199;Name=L8R42_003199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003199 DAFVNP010000060.1 Protein Homology CDS 7696 8679 . + 0 ID=cds-HBQ7391255.1;Parent=gene-L8R42_003199;Dbxref=NCBI_GP:HBQ7391255.1;Name=HBQ7391255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=L8R42_003199;product=TRAP transporter substrate-binding protein;protein_id=HBQ7391255.1;transl_table=11 DAFVNP010000060.1 tpg gene 8721 9203 . + . ID=gene-L8R42_003200;Name=L8R42_003200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003200 DAFVNP010000060.1 Protein Homology CDS 8721 9203 . + 0 ID=cds-HBQ7391256.1;Parent=gene-L8R42_003200;Dbxref=NCBI_GP:HBQ7391256.1;Name=HBQ7391256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=L8R42_003200;product=TRAP transporter small permease;protein_id=HBQ7391256.1;transl_table=11 DAFVNP010000060.1 tpg gene 9214 10521 . + . ID=gene-L8R42_003201;Name=L8R42_003201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003201 DAFVNP010000060.1 Protein Homology CDS 9214 10521 . + 0 ID=cds-HBQ7391257.1;Parent=gene-L8R42_003201;Dbxref=NCBI_GP:HBQ7391257.1;Name=HBQ7391257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=L8R42_003201;product=TRAP transporter large permease subunit;protein_id=HBQ7391257.1;transl_table=11 DAFVNP010000060.1 tpg gene 10566 11978 . - . ID=gene-L8R42_003202;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=L8R42_003202 DAFVNP010000060.1 Protein Homology CDS 10566 11978 . - 0 ID=cds-HBQ7391258.1;Parent=gene-L8R42_003202;Dbxref=NCBI_GP:HBQ7391258.1;Name=HBQ7391258.1;gbkey=CDS;gene=ftsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=L8R42_003202;product=cell division protein FtsP;protein_id=HBQ7391258.1;transl_table=11 DAFVNP010000060.1 tpg gene 12052 12789 . - . ID=gene-L8R42_003203;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=L8R42_003203 DAFVNP010000060.1 Protein Homology CDS 12052 12789 . - 0 ID=cds-HBQ7391259.1;Parent=gene-L8R42_003203;Dbxref=NCBI_GP:HBQ7391259.1;Name=HBQ7391259.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=L8R42_003203;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=HBQ7391259.1;transl_table=11 DAFVNP010000060.1 tpg gene 13046 15304 . - . ID=gene-L8R42_003204;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=L8R42_003204 DAFVNP010000060.1 Protein Homology CDS 13046 15304 . - 0 ID=cds-HBQ7391260.1;Parent=gene-L8R42_003204;Dbxref=NCBI_GP:HBQ7391260.1;Name=HBQ7391260.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=L8R42_003204;product=DNA topoisomerase IV subunit A;protein_id=HBQ7391260.1;transl_table=11 DAFVNP010000060.1 tpg gene 15415 16281 . - . ID=gene-L8R42_003205;Name=L8R42_003205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003205 DAFVNP010000060.1 Protein Homology CDS 15415 16281 . - 0 ID=cds-HBQ7391261.1;Parent=gene-L8R42_003205;Dbxref=NCBI_GP:HBQ7391261.1;Name=HBQ7391261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=L8R42_003205;product=AraC family transcriptional regulator;protein_id=HBQ7391261.1;transl_table=11 DAFVNP010000060.1 tpg gene 16353 16745 . - . ID=gene-L8R42_003206;Name=L8R42_003206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003206 DAFVNP010000060.1 Protein Homology CDS 16353 16745 . - 0 ID=cds-HBQ7391262.1;Parent=gene-L8R42_003206;Dbxref=NCBI_GP:HBQ7391262.1;Name=HBQ7391262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=L8R42_003206;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=HBQ7391262.1;transl_table=11 DAFVNP010000060.1 tpg gene 16897 17556 . + . ID=gene-L8R42_003207;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=L8R42_003207 DAFVNP010000060.1 Protein Homology CDS 16897 17556 . + 0 ID=cds-HBQ7391263.1;Parent=gene-L8R42_003207;Dbxref=NCBI_GP:HBQ7391263.1;Name=HBQ7391263.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=L8R42_003207;product=two-component system response regulator QseB;protein_id=HBQ7391263.1;transl_table=11 DAFVNP010000060.1 tpg gene 17553 18902 . + . ID=gene-L8R42_003208;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=L8R42_003208 DAFVNP010000060.1 Protein Homology CDS 17553 18902 . + 0 ID=cds-HBQ7391264.1;Parent=gene-L8R42_003208;Dbxref=NCBI_GP:HBQ7391264.1;Name=HBQ7391264.1;gbkey=CDS;gene=qseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=L8R42_003208;product=two-component system sensor histidine kinase QseC;protein_id=HBQ7391264.1;transl_table=11 DAFVNP010000060.1 tpg gene 19009 19590 . + . ID=gene-L8R42_003209;Name=L8R42_003209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003209 DAFVNP010000060.1 Protein Homology CDS 19009 19590 . + 0 ID=cds-HBQ7391265.1;Parent=gene-L8R42_003209;Dbxref=NCBI_GP:HBQ7391265.1;Name=HBQ7391265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=L8R42_003209;product=NAD(P)H-dependent oxidoreductase;protein_id=HBQ7391265.1;transl_table=11 DAFVNP010000060.1 tpg gene 19622 19936 . + . ID=gene-L8R42_003210;Name=L8R42_003210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003210 DAFVNP010000060.1 Protein Homology CDS 19622 19936 . + 0 ID=cds-HBQ7391266.1;Parent=gene-L8R42_003210;Dbxref=NCBI_GP:HBQ7391266.1;Name=HBQ7391266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=L8R42_003210;product=antibiotic biosynthesis monooxygenase;protein_id=HBQ7391266.1;transl_table=11 DAFVNP010000060.1 tpg gene 20061 21953 . - . ID=gene-L8R42_003211;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=L8R42_003211 DAFVNP010000060.1 Protein Homology CDS 20061 21953 . - 0 ID=cds-HBQ7391267.1;Parent=gene-L8R42_003211;Dbxref=NCBI_GP:HBQ7391267.1;Name=HBQ7391267.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=L8R42_003211;product=DNA topoisomerase IV subunit B;protein_id=HBQ7391267.1;transl_table=11 DAFVNP010000060.1 tpg gene 21981 22562 . - . ID=gene-L8R42_003212;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=L8R42_003212 DAFVNP010000060.1 Protein Homology CDS 21981 22562 . - 0 ID=cds-HBQ7391268.1;Parent=gene-L8R42_003212;Dbxref=NCBI_GP:HBQ7391268.1;Name=HBQ7391268.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=L8R42_003212;product=esterase YqiA;protein_id=HBQ7391268.1;transl_table=11 DAFVNP010000060.1 tpg gene 22562 23389 . - . ID=gene-L8R42_003213;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=L8R42_003213 DAFVNP010000060.1 Protein Homology CDS 22562 23389 . - 0 ID=cds-HBQ7391269.1;Parent=gene-L8R42_003213;Dbxref=NCBI_GP:HBQ7391269.1;Name=HBQ7391269.1;gbkey=CDS;gene=cpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=L8R42_003213;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=HBQ7391269.1;transl_table=11 DAFVNP010000060.1 tpg gene 23414 23836 . - . ID=gene-L8R42_003214;Name=L8R42_003214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003214 DAFVNP010000060.1 Protein Homology CDS 23414 23836 . - 0 ID=cds-HBQ7391270.1;Parent=gene-L8R42_003214;Dbxref=NCBI_GP:HBQ7391270.1;Name=HBQ7391270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=L8R42_003214;product=DUF1249 family protein;protein_id=HBQ7391270.1;transl_table=11 DAFVNP010000060.1 tpg gene 23833 24465 . - . ID=gene-L8R42_003215;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=L8R42_003215 DAFVNP010000060.1 Protein Homology CDS 23833 24465 . - 0 ID=cds-HBQ7391271.1;Parent=gene-L8R42_003215;Dbxref=NCBI_GP:HBQ7391271.1;Name=HBQ7391271.1;gbkey=CDS;gene=nudF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=L8R42_003215;product=ADP-ribose diphosphatase;protein_id=HBQ7391271.1;transl_table=11 DAFVNP010000060.1 tpg gene 24666 26141 . + . ID=gene-L8R42_003216;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=L8R42_003216 DAFVNP010000060.1 Protein Homology CDS 24666 26141 . + 0 ID=cds-HBQ7391272.1;Parent=gene-L8R42_003216;Dbxref=NCBI_GP:HBQ7391272.1;Name=HBQ7391272.1;gbkey=CDS;gene=tolC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=L8R42_003216;product=outer membrane channel protein TolC;protein_id=HBQ7391272.1;transl_table=11 DAFVNP010000060.1 tpg gene 26354 27025 . + . ID=gene-L8R42_003217;Name=L8R42_003217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003217 DAFVNP010000060.1 Protein Homology CDS 26354 27025 . + 0 ID=cds-HBQ7391273.1;Parent=gene-L8R42_003217;Dbxref=NCBI_GP:HBQ7391273.1;Name=HBQ7391273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=L8R42_003217;product=DUF1190 family protein;protein_id=HBQ7391273.1;transl_table=11 DAFVNP010000060.1 tpg gene 27031 28194 . + . ID=gene-L8R42_003218;Name=L8R42_003218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003218 DAFVNP010000060.1 Protein Homology CDS 27031 28194 . + 0 ID=cds-HBQ7391274.1;Parent=gene-L8R42_003218;Dbxref=NCBI_GP:HBQ7391274.1;Name=HBQ7391274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=L8R42_003218;product=glutathionylspermidine synthase family protein;protein_id=HBQ7391274.1;transl_table=11 DAFVNP010000060.1 tpg gene 28256 29044 . - . ID=gene-L8R42_003219;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=L8R42_003219 DAFVNP010000060.1 Protein Homology CDS 28256 29044 . - 0 ID=cds-HBQ7391275.1;Parent=gene-L8R42_003219;Dbxref=NCBI_GP:HBQ7391275.1;Name=HBQ7391275.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=L8R42_003219;product=4%2C5-DOPA dioxygenase extradiol;protein_id=HBQ7391275.1;transl_table=11 DAFVNP010000060.1 tpg gene 29185 29958 . + . ID=gene-L8R42_003220;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=L8R42_003220 DAFVNP010000060.1 Protein Homology CDS 29185 29958 . + 0 ID=cds-HBQ7391276.1;Parent=gene-L8R42_003220;Dbxref=NCBI_GP:HBQ7391276.1;Name=HBQ7391276.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=L8R42_003220;product=zinc transporter ZupT;protein_id=HBQ7391276.1;transl_table=11 ##sequence-region DAFVNP010000061.1 1 29882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000061.1 tpg region 1 29882 . + . ID=DAFVNP010000061.1:1..29882;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000061.1 tpg gene 1 791 . + . ID=gene-L8R42_003221;Name=L8R42_003221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003221;partial=true;start_range=.,1 DAFVNP010000061.1 Protein Homology CDS 1 791 . + 2 ID=cds-HBQ7391277.1;Parent=gene-L8R42_003221;Dbxref=NCBI_GP:HBQ7391277.1;Name=HBQ7391277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=L8R42_003221;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=HBQ7391277.1;start_range=.,1;transl_table=11 DAFVNP010000061.1 tpg gene 926 2545 . + . ID=gene-L8R42_003222;Name=L8R42_003222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003222 DAFVNP010000061.1 Protein Homology CDS 926 2545 . + 0 ID=cds-HBQ7391278.1;Parent=gene-L8R42_003222;Dbxref=NCBI_GP:HBQ7391278.1;Name=HBQ7391278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=L8R42_003222;product=sensor histidine kinase;protein_id=HBQ7391278.1;transl_table=11 DAFVNP010000061.1 tpg gene 2547 3233 . + . ID=gene-L8R42_003223;Name=L8R42_003223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003223 DAFVNP010000061.1 Protein Homology CDS 2547 3233 . + 0 ID=cds-HBQ7391279.1;Parent=gene-L8R42_003223;Dbxref=NCBI_GP:HBQ7391279.1;Name=HBQ7391279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=L8R42_003223;product=response regulator;protein_id=HBQ7391279.1;transl_table=11 DAFVNP010000061.1 tpg gene 3255 4175 . - . ID=gene-L8R42_003224;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=L8R42_003224 DAFVNP010000061.1 Protein Homology CDS 3255 4175 . - 0 ID=cds-HBQ7391280.1;Parent=gene-L8R42_003224;Dbxref=NCBI_GP:HBQ7391280.1;Name=HBQ7391280.1;gbkey=CDS;gene=rihC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=L8R42_003224;product=ribonucleoside hydrolase RihC;protein_id=HBQ7391280.1;transl_table=11 DAFVNP010000061.1 tpg gene 4191 5393 . - . ID=gene-L8R42_003225;Name=L8R42_003225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003225 DAFVNP010000061.1 Protein Homology CDS 4191 5393 . - 0 ID=cds-HBQ7391281.1;Parent=gene-L8R42_003225;Dbxref=NCBI_GP:HBQ7391281.1;Name=HBQ7391281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=L8R42_003225;product=nitrite reductase;protein_id=HBQ7391281.1;transl_table=11 DAFVNP010000061.1 tpg gene 5593 6543 . - . ID=gene-L8R42_003226;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=L8R42_003226 DAFVNP010000061.1 Protein Homology CDS 5593 6543 . - 0 ID=cds-HBQ7391282.1;Parent=gene-L8R42_003226;Dbxref=NCBI_GP:HBQ7391282.1;Name=HBQ7391282.1;gbkey=CDS;gene=ispH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=L8R42_003226;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=HBQ7391282.1;transl_table=11 DAFVNP010000061.1 tpg gene 6546 6995 . - . ID=gene-L8R42_003227;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=L8R42_003227 DAFVNP010000061.1 Protein Homology CDS 6546 6995 . - 0 ID=cds-HBQ7391283.1;Parent=gene-L8R42_003227;Dbxref=NCBI_GP:HBQ7391283.1;Name=HBQ7391283.1;gbkey=CDS;gene=fkpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=L8R42_003227;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HBQ7391283.1;transl_table=11 DAFVNP010000061.1 tpg gene 7150 7650 . - . ID=gene-L8R42_003228;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=L8R42_003228 DAFVNP010000061.1 Protein Homology CDS 7150 7650 . - 0 ID=cds-HBQ7391284.1;Parent=gene-L8R42_003228;Dbxref=NCBI_GP:HBQ7391284.1;Name=HBQ7391284.1;gbkey=CDS;gene=lspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=L8R42_003228;product=signal peptidase II;protein_id=HBQ7391284.1;transl_table=11 DAFVNP010000061.1 tpg gene 7650 10505 . - . ID=gene-L8R42_003229;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=L8R42_003229 DAFVNP010000061.1 Protein Homology CDS 7650 10505 . - 0 ID=cds-HBQ7391285.1;Parent=gene-L8R42_003229;Dbxref=NCBI_GP:HBQ7391285.1;Name=HBQ7391285.1;gbkey=CDS;gene=ileS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=L8R42_003229;product=isoleucine--tRNA ligase;protein_id=HBQ7391285.1;transl_table=11 DAFVNP010000061.1 tpg gene 10550 11488 . - . ID=gene-L8R42_003230;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=L8R42_003230 DAFVNP010000061.1 Protein Homology CDS 10550 11488 . - 0 ID=cds-HBQ7391286.1;Parent=gene-L8R42_003230;Dbxref=NCBI_GP:HBQ7391286.1;Name=HBQ7391286.1;gbkey=CDS;gene=ribF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=L8R42_003230;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=HBQ7391286.1;transl_table=11 DAFVNP010000061.1 tpg gene 11496 11711 . - . ID=gene-L8R42_003231;Name=L8R42_003231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003231 DAFVNP010000061.1 Protein Homology CDS 11496 11711 . - 0 ID=cds-HBQ7391287.1;Parent=gene-L8R42_003231;Dbxref=NCBI_GP:HBQ7391287.1;Name=HBQ7391287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=L8R42_003231;product=DUF2575 family protein;protein_id=HBQ7391287.1;transl_table=11 DAFVNP010000061.1 tpg gene 11817 12080 . + . ID=gene-L8R42_003232;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=L8R42_003232 DAFVNP010000061.1 Protein Homology CDS 11817 12080 . + 0 ID=cds-HBQ7391288.1;Parent=gene-L8R42_003232;Dbxref=NCBI_GP:HBQ7391288.1;Name=HBQ7391288.1;gbkey=CDS;gene=rpsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=L8R42_003232;product=30S ribosomal protein S20;protein_id=HBQ7391288.1;transl_table=11 DAFVNP010000061.1 tpg gene 12536 13909 . + . ID=gene-L8R42_003233;Name=L8R42_003233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003233 DAFVNP010000061.1 Protein Homology CDS 12536 13909 . + 0 ID=cds-HBQ7391289.1;Parent=gene-L8R42_003233;Dbxref=NCBI_GP:HBQ7391289.1;Name=HBQ7391289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=L8R42_003233;product=MFS transporter;protein_id=HBQ7391289.1;transl_table=11 DAFVNP010000061.1 tpg gene 13949 15988 . + . ID=gene-L8R42_003234;Name=L8R42_003234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003234 DAFVNP010000061.1 Protein Homology CDS 13949 15988 . + 0 ID=cds-HBQ7391290.1;Parent=gene-L8R42_003234;Dbxref=NCBI_GP:HBQ7391290.1;Name=HBQ7391290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=L8R42_003234;product=glycoside hydrolase family 31 protein;protein_id=HBQ7391290.1;transl_table=11 DAFVNP010000061.1 tpg gene 16043 16942 . - . ID=gene-L8R42_003235;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=L8R42_003235 DAFVNP010000061.1 Protein Homology CDS 16043 16942 . - 0 ID=cds-HBQ7391291.1;Parent=gene-L8R42_003235;Dbxref=NCBI_GP:HBQ7391291.1;Name=HBQ7391291.1;gbkey=CDS;gene=nhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=L8R42_003235;product=transcriptional activator NhaR;protein_id=HBQ7391291.1;transl_table=11 DAFVNP010000061.1 tpg gene 17004 18170 . - . ID=gene-L8R42_003236;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=L8R42_003236 DAFVNP010000061.1 Protein Homology CDS 17004 18170 . - 0 ID=cds-HBQ7391292.1;Parent=gene-L8R42_003236;Dbxref=NCBI_GP:HBQ7391292.1;Name=HBQ7391292.1;gbkey=CDS;gene=nhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=L8R42_003236;product=Na+/H+ antiporter NhaA;protein_id=HBQ7391292.1;transl_table=11 DAFVNP010000061.1 tpg gene 18333 20048 . - . ID=gene-L8R42_003237;Name=L8R42_003237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003237 DAFVNP010000061.1 Protein Homology CDS 18333 20048 . - 0 ID=cds-HBQ7391293.1;Parent=gene-L8R42_003237;Dbxref=NCBI_GP:HBQ7391293.1;Name=HBQ7391293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=L8R42_003237;product=aryl-sulfate sulfotransferase;protein_id=HBQ7391293.1;transl_table=11 DAFVNP010000061.1 tpg gene 20175 21428 . - . ID=gene-L8R42_003238;Name=L8R42_003238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003238 DAFVNP010000061.1 Protein Homology CDS 20175 21428 . - 0 ID=cds-HBQ7391294.1;Parent=gene-L8R42_003238;Dbxref=NCBI_GP:HBQ7391294.1;Name=HBQ7391294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=L8R42_003238;product=cytoplasmic protein;protein_id=HBQ7391294.1;transl_table=11 DAFVNP010000061.1 tpg gene 21447 22637 . - . ID=gene-L8R42_003239;Name=L8R42_003239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003239 DAFVNP010000061.1 Protein Homology CDS 21447 22637 . - 0 ID=cds-HBQ7391295.1;Parent=gene-L8R42_003239;Dbxref=NCBI_GP:HBQ7391295.1;Name=HBQ7391295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=L8R42_003239;product=anaerobic sulfatase maturase;protein_id=HBQ7391295.1;transl_table=11 DAFVNP010000061.1 tpg gene 22736 24229 . - . ID=gene-L8R42_003240;Name=L8R42_003240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003240 DAFVNP010000061.1 Protein Homology CDS 22736 24229 . - 0 ID=cds-HBQ7391296.1;Parent=gene-L8R42_003240;Dbxref=NCBI_GP:HBQ7391296.1;Name=HBQ7391296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=L8R42_003240;product=sulfatase-like hydrolase/transferase;protein_id=HBQ7391296.1;transl_table=11 DAFVNP010000061.1 tpg gene 24824 25585 . + . ID=gene-L8R42_003241;Name=L8R42_003241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003241 DAFVNP010000061.1 Protein Homology CDS 24824 25585 . + 0 ID=cds-HBQ7391297.1;Parent=gene-L8R42_003241;Dbxref=NCBI_GP:HBQ7391297.1;Name=HBQ7391297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=L8R42_003241;product=hypothetical protein;protein_id=HBQ7391297.1;transl_table=11 DAFVNP010000061.1 tpg gene 25684 27255 . + . ID=gene-L8R42_003242;Name=L8R42_003242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003242 DAFVNP010000061.1 Protein Homology CDS 25684 27255 . + 0 ID=cds-HBQ7391298.1;Parent=gene-L8R42_003242;Dbxref=NCBI_GP:HBQ7391298.1;Name=HBQ7391298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=L8R42_003242;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=HBQ7391298.1;transl_table=11 DAFVNP010000061.1 tpg gene 27301 29019 . - . ID=gene-L8R42_003243;Name=L8R42_003243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003243 DAFVNP010000061.1 Protein Homology CDS 27301 29019 . - 0 ID=cds-HBQ7391299.1;Parent=gene-L8R42_003243;Dbxref=NCBI_GP:HBQ7391299.1;Name=HBQ7391299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=L8R42_003243;product=aryl-sulfate sulfotransferase;protein_id=HBQ7391299.1;transl_table=11 DAFVNP010000061.1 tpg gene 29542 29882 . + . ID=gene-L8R42_003244;Name=L8R42_003244;end_range=29882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003244;partial=true DAFVNP010000061.1 Protein Homology CDS 29542 29882 . + 0 ID=cds-HBQ7391300.1;Parent=gene-L8R42_003244;Dbxref=NCBI_GP:HBQ7391300.1;Name=HBQ7391300.1;end_range=29882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=L8R42_003244;partial=true;product=transcriptional regulator;protein_id=HBQ7391300.1;transl_table=11 ##sequence-region DAFVNP010000062.1 1 29533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000062.1 tpg region 1 29533 . + . ID=DAFVNP010000062.1:1..29533;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000062.1 tpg gene 241 3114 . - . ID=gene-L8R42_003245;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=L8R42_003245 DAFVNP010000062.1 Protein Homology CDS 241 3114 . - 0 ID=cds-HBQ7391301.1;Parent=gene-L8R42_003245;Dbxref=NCBI_GP:HBQ7391301.1;Name=HBQ7391301.1;gbkey=CDS;gene=gcvP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=L8R42_003245;product=aminomethyl-transferring glycine dehydrogenase;protein_id=HBQ7391301.1;transl_table=11 DAFVNP010000062.1 tpg gene 3277 3666 . - . ID=gene-L8R42_003246;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=L8R42_003246 DAFVNP010000062.1 Protein Homology CDS 3277 3666 . - 0 ID=cds-HBQ7391302.1;Parent=gene-L8R42_003246;Dbxref=NCBI_GP:HBQ7391302.1;Name=HBQ7391302.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=L8R42_003246;product=glycine cleavage system protein GcvH;protein_id=HBQ7391302.1;transl_table=11 DAFVNP010000062.1 tpg gene 3692 4786 . - . ID=gene-L8R42_003247;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=L8R42_003247 DAFVNP010000062.1 Protein Homology CDS 3692 4786 . - 0 ID=cds-HBQ7391303.1;Parent=gene-L8R42_003247;Dbxref=NCBI_GP:HBQ7391303.1;Name=HBQ7391303.1;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=L8R42_003247;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=HBQ7391303.1;transl_table=11 DAFVNP010000062.1 tpg gene 5242 6444 . - . ID=gene-L8R42_003248;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=L8R42_003248 DAFVNP010000062.1 Protein Homology CDS 5242 6444 . - 0 ID=cds-HBQ7391304.1;Parent=gene-L8R42_003248;Dbxref=NCBI_GP:HBQ7391304.1;Name=HBQ7391304.1;gbkey=CDS;gene=ubiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=L8R42_003248;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=HBQ7391304.1;transl_table=11 DAFVNP010000062.1 tpg gene 6570 7748 . - . ID=gene-L8R42_003249;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=L8R42_003249 DAFVNP010000062.1 Protein Homology CDS 6570 7748 . - 0 ID=cds-HBQ7391305.1;Parent=gene-L8R42_003249;Dbxref=NCBI_GP:HBQ7391305.1;Name=HBQ7391305.1;gbkey=CDS;gene=ubiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=L8R42_003249;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=HBQ7391305.1;transl_table=11 DAFVNP010000062.1 tpg gene 7745 9061 . - . ID=gene-L8R42_003250;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=L8R42_003250 DAFVNP010000062.1 Protein Homology CDS 7745 9061 . - 0 ID=cds-HBQ7391306.1;Parent=gene-L8R42_003250;Dbxref=NCBI_GP:HBQ7391306.1;Name=HBQ7391306.1;gbkey=CDS;gene=pepP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=L8R42_003250;product=Xaa-Pro aminopeptidase;protein_id=HBQ7391306.1;transl_table=11 DAFVNP010000062.1 tpg gene 9087 9665 . - . ID=gene-L8R42_003251;Name=L8R42_003251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003251 DAFVNP010000062.1 Protein Homology CDS 9087 9665 . - 0 ID=cds-HBQ7391307.1;Parent=gene-L8R42_003251;Dbxref=NCBI_GP:HBQ7391307.1;Name=HBQ7391307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=L8R42_003251;product=YecA family protein;protein_id=HBQ7391307.1;transl_table=11 DAFVNP010000062.1 tpg gene 9832 10161 . + . ID=gene-L8R42_003252;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=L8R42_003252 DAFVNP010000062.1 Protein Homology CDS 9832 10161 . + 0 ID=cds-HBQ7391308.1;Parent=gene-L8R42_003252;Dbxref=NCBI_GP:HBQ7391308.1;Name=HBQ7391308.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=L8R42_003252;product=cell division protein ZapA;protein_id=HBQ7391308.1;transl_table=11 DAFVNP010000062.1 tpg gene 10203 10386 . + . ID=gene-L8R42_003253;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=L8R42_003253 DAFVNP010000062.1 cmsearch ncRNA 10203 10386 . + . ID=rna-L8R42_003253;Parent=gene-L8R42_003253;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_003253;product=6S RNA DAFVNP010000062.1 cmsearch exon 10203 10386 . + . ID=exon-L8R42_003253-1;Parent=rna-L8R42_003253;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_003253;product=6S RNA DAFVNP010000062.1 tpg gene 10407 11003 . + . ID=gene-L8R42_003254;Name=L8R42_003254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003254 DAFVNP010000062.1 Protein Homology CDS 10407 11003 . + 0 ID=cds-HBQ7391309.1;Parent=gene-L8R42_003254;Dbxref=NCBI_GP:HBQ7391309.1;Name=HBQ7391309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=L8R42_003254;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=HBQ7391309.1;transl_table=11 DAFVNP010000062.1 tpg gene 11384 12616 . - . ID=gene-L8R42_003255;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=L8R42_003255 DAFVNP010000062.1 Protein Homology CDS 11384 12616 . - 0 ID=cds-HBQ7391310.1;Parent=gene-L8R42_003255;Dbxref=NCBI_GP:HBQ7391310.1;Name=HBQ7391310.1;gbkey=CDS;gene=serA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=L8R42_003255;product=phosphoglycerate dehydrogenase;protein_id=HBQ7391310.1;transl_table=11 DAFVNP010000062.1 tpg gene 12883 13542 . - . ID=gene-L8R42_003256;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=L8R42_003256 DAFVNP010000062.1 Protein Homology CDS 12883 13542 . - 0 ID=cds-HBQ7391311.1;Parent=gene-L8R42_003256;Dbxref=NCBI_GP:HBQ7391311.1;Name=HBQ7391311.1;gbkey=CDS;gene=rpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=L8R42_003256;product=ribose-5-phosphate isomerase RpiA;protein_id=HBQ7391311.1;transl_table=11 DAFVNP010000062.1 tpg gene 13696 14589 . + . ID=gene-L8R42_003257;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=L8R42_003257 DAFVNP010000062.1 Protein Homology CDS 13696 14589 . + 0 ID=cds-HBQ7391312.1;Parent=gene-L8R42_003257;Dbxref=NCBI_GP:HBQ7391312.1;Name=HBQ7391312.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=L8R42_003257;product=DNA-binding transcriptional regulator ArgP;protein_id=HBQ7391312.1;transl_table=11 DAFVNP010000062.1 tpg gene 14855 15601 . - . ID=gene-L8R42_003258;Name=L8R42_003258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003258 DAFVNP010000062.1 Protein Homology CDS 14855 15601 . - 0 ID=cds-HBQ7391313.1;Parent=gene-L8R42_003258;Dbxref=NCBI_GP:HBQ7391313.1;Name=HBQ7391313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=L8R42_003258;product=oxidative stress defense protein;protein_id=HBQ7391313.1;transl_table=11 DAFVNP010000062.1 tpg gene 15695 16330 . - . ID=gene-L8R42_003259;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=L8R42_003259 DAFVNP010000062.1 Protein Homology CDS 15695 16330 . - 0 ID=cds-HBQ7391314.1;Parent=gene-L8R42_003259;Dbxref=NCBI_GP:HBQ7391314.1;Name=HBQ7391314.1;gbkey=CDS;gene=argO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=L8R42_003259;product=arginine exporter ArgO;protein_id=HBQ7391314.1;transl_table=11 DAFVNP010000062.1 tpg gene 16531 17391 . - . ID=gene-L8R42_003260;Name=L8R42_003260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003260 DAFVNP010000062.1 Protein Homology CDS 16531 17391 . - 0 ID=cds-HBQ7391315.1;Parent=gene-L8R42_003260;Dbxref=NCBI_GP:HBQ7391315.1;Name=HBQ7391315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=L8R42_003260;product=small-conductance mechanosensitive channel MscS;protein_id=HBQ7391315.1;transl_table=11 DAFVNP010000062.1 tpg gene 17624 18703 . - . ID=gene-L8R42_003261;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=L8R42_003261 DAFVNP010000062.1 Protein Homology CDS 17624 18703 . - 0 ID=cds-HBQ7391316.1;Parent=gene-L8R42_003261;Dbxref=NCBI_GP:HBQ7391316.1;Name=HBQ7391316.1;gbkey=CDS;gene=fbaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=L8R42_003261;product=class II fructose-bisphosphate aldolase;protein_id=HBQ7391316.1;transl_table=11 DAFVNP010000062.1 tpg gene 18805 19968 . - . ID=gene-L8R42_003262;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=L8R42_003262 DAFVNP010000062.1 Protein Homology CDS 18805 19968 . - 0 ID=cds-HBQ7391317.1;Parent=gene-L8R42_003262;Dbxref=NCBI_GP:HBQ7391317.1;Name=HBQ7391317.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=L8R42_003262;product=phosphoglycerate kinase;protein_id=HBQ7391317.1;transl_table=11 DAFVNP010000062.1 tpg gene 19990 21036 . - . ID=gene-L8R42_003263;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=L8R42_003263 DAFVNP010000062.1 Protein Homology CDS 19990 21036 . - 0 ID=cds-HBQ7391318.1;Parent=gene-L8R42_003263;Dbxref=NCBI_GP:HBQ7391318.1;Name=HBQ7391318.1;gbkey=CDS;gene=epd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=L8R42_003263;product=erythrose-4-phosphate dehydrogenase;protein_id=HBQ7391318.1;transl_table=11 DAFVNP010000062.1 tpg gene 21410 21835 . + . ID=gene-L8R42_003264;Name=L8R42_003264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003264 DAFVNP010000062.1 Protein Homology CDS 21410 21835 . + 0 ID=cds-HBQ7391319.1;Parent=gene-L8R42_003264;Dbxref=NCBI_GP:HBQ7391319.1;Name=HBQ7391319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=L8R42_003264;product=DNA-binding protein;protein_id=HBQ7391319.1;transl_table=11 DAFVNP010000062.1 tpg gene 21861 22439 . + . ID=gene-L8R42_003265;Name=L8R42_003265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003265 DAFVNP010000062.1 Protein Homology CDS 21861 22439 . + 0 ID=cds-HBQ7391320.1;Parent=gene-L8R42_003265;Dbxref=NCBI_GP:HBQ7391320.1;Name=HBQ7391320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=L8R42_003265;product=ECF transporter S component;protein_id=HBQ7391320.1;transl_table=11 DAFVNP010000062.1 tpg gene 22440 23147 . + . ID=gene-L8R42_003266;Name=L8R42_003266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003266 DAFVNP010000062.1 Protein Homology CDS 22440 23147 . + 0 ID=cds-HBQ7391321.1;Parent=gene-L8R42_003266;Dbxref=NCBI_GP:HBQ7391321.1;Name=HBQ7391321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=L8R42_003266;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=HBQ7391321.1;transl_table=11 DAFVNP010000062.1 tpg gene 23135 23812 . + . ID=gene-L8R42_003267;Name=L8R42_003267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003267 DAFVNP010000062.1 Protein Homology CDS 23135 23812 . + 0 ID=cds-HBQ7391322.1;Parent=gene-L8R42_003267;Dbxref=NCBI_GP:HBQ7391322.1;Name=HBQ7391322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=L8R42_003267;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=HBQ7391322.1;transl_table=11 DAFVNP010000062.1 tpg gene 23806 24462 . + . ID=gene-L8R42_003268;Name=L8R42_003268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003268 DAFVNP010000062.1 Protein Homology CDS 23806 24462 . + 0 ID=cds-HBQ7391323.1;Parent=gene-L8R42_003268;Dbxref=NCBI_GP:HBQ7391323.1;Name=HBQ7391323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=L8R42_003268;product=ATP-binding cassette domain-containing protein;protein_id=HBQ7391323.1;transl_table=11 DAFVNP010000062.1 tpg gene 24506 26497 . - . ID=gene-L8R42_003269;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=L8R42_003269 DAFVNP010000062.1 Protein Homology CDS 24506 26497 . - 0 ID=cds-HBQ7391324.1;Parent=gene-L8R42_003269;Dbxref=NCBI_GP:HBQ7391324.1;Name=HBQ7391324.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=L8R42_003269;product=transketolase;protein_id=HBQ7391324.1;transl_table=11 DAFVNP010000062.1 tpg gene 26773 27531 . + . ID=gene-L8R42_003270;Name=L8R42_003270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003270 DAFVNP010000062.1 Protein Homology CDS 26773 27531 . + 0 ID=cds-HBQ7391325.1;Parent=gene-L8R42_003270;Dbxref=NCBI_GP:HBQ7391325.1;Name=HBQ7391325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=L8R42_003270;product=M48 family metallopeptidase;protein_id=HBQ7391325.1;transl_table=11 DAFVNP010000062.1 tpg gene 27632 28552 . - . ID=gene-L8R42_003271;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=L8R42_003271 DAFVNP010000062.1 Protein Homology CDS 27632 28552 . - 0 ID=cds-HBQ7391326.1;Parent=gene-L8R42_003271;Dbxref=NCBI_GP:HBQ7391326.1;Name=HBQ7391326.1;gbkey=CDS;gene=speB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=L8R42_003271;product=agmatinase;protein_id=HBQ7391326.1;transl_table=11 DAFVNP010000062.1 tpg pseudogene 28757 29533 . - . ID=gene-L8R42_003272;Name=L8R42_003272;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003272;pseudo=true DAFVNP010000062.1 Protein Homology CDS 28757 29533 . - 0 ID=cds-L8R42_003272;Parent=gene-L8R42_003272;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=L8R42_003272;product=alpha/beta hydrolase;pseudo=true;transl_table=11 ##sequence-region DAFVNP010000063.1 1 29504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000063.1 tpg region 1 29504 . + . ID=DAFVNP010000063.1:1..29504;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000063.1 tpg gene 1 158 . - . ID=gene-L8R42_003273;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=L8R42_003273;partial=true;start_range=.,1 DAFVNP010000063.1 Protein Homology CDS 1 158 . - 0 ID=cds-HBQ7391327.1;Parent=gene-L8R42_003273;Dbxref=NCBI_GP:HBQ7391327.1;Name=HBQ7391327.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=L8R42_003273;partial=true;product=elongation factor Tu;protein_id=HBQ7391327.1;start_range=.,1;transl_table=11 DAFVNP010000063.1 tpg gene 230 2344 . - . ID=gene-L8R42_003274;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=L8R42_003274 DAFVNP010000063.1 Protein Homology CDS 230 2344 . - 0 ID=cds-HBQ7391328.1;Parent=gene-L8R42_003274;Dbxref=NCBI_GP:HBQ7391328.1;Name=HBQ7391328.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=L8R42_003274;product=elongation factor G;protein_id=HBQ7391328.1;transl_table=11 DAFVNP010000063.1 tpg gene 2441 2911 . - . ID=gene-L8R42_003275;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=L8R42_003275 DAFVNP010000063.1 Protein Homology CDS 2441 2911 . - 0 ID=cds-HBQ7391329.1;Parent=gene-L8R42_003275;Dbxref=NCBI_GP:HBQ7391329.1;Name=HBQ7391329.1;gbkey=CDS;gene=rpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015873274.1;locus_tag=L8R42_003275;product=30S ribosomal protein S7;protein_id=HBQ7391329.1;transl_table=11 DAFVNP010000063.1 tpg gene 3007 3381 . - . ID=gene-L8R42_003276;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=L8R42_003276 DAFVNP010000063.1 Protein Homology CDS 3007 3381 . - 0 ID=cds-HBQ7391330.1;Parent=gene-L8R42_003276;Dbxref=NCBI_GP:HBQ7391330.1;Name=HBQ7391330.1;gbkey=CDS;gene=rpsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=L8R42_003276;product=30S ribosomal protein S12;protein_id=HBQ7391330.1;transl_table=11 DAFVNP010000063.1 tpg gene 3507 3794 . - . ID=gene-L8R42_003277;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=L8R42_003277 DAFVNP010000063.1 Protein Homology CDS 3507 3794 . - 0 ID=cds-HBQ7391331.1;Parent=gene-L8R42_003277;Dbxref=NCBI_GP:HBQ7391331.1;Name=HBQ7391331.1;gbkey=CDS;gene=tusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=L8R42_003277;product=sulfurtransferase complex subunit TusB;protein_id=HBQ7391331.1;transl_table=11 DAFVNP010000063.1 tpg gene 3802 4158 . - . ID=gene-L8R42_003278;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=L8R42_003278 DAFVNP010000063.1 Protein Homology CDS 3802 4158 . - 0 ID=cds-HBQ7391332.1;Parent=gene-L8R42_003278;Dbxref=NCBI_GP:HBQ7391332.1;Name=HBQ7391332.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=L8R42_003278;product=sulfurtransferase complex subunit TusC;protein_id=HBQ7391332.1;transl_table=11 DAFVNP010000063.1 tpg gene 4158 4544 . - . ID=gene-L8R42_003279;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=L8R42_003279 DAFVNP010000063.1 Protein Homology CDS 4158 4544 . - 0 ID=cds-HBQ7391333.1;Parent=gene-L8R42_003279;Dbxref=NCBI_GP:HBQ7391333.1;Name=HBQ7391333.1;gbkey=CDS;gene=tusD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=L8R42_003279;product=sulfurtransferase complex subunit TusD;protein_id=HBQ7391333.1;transl_table=11 DAFVNP010000063.1 tpg gene 4544 5266 . - . ID=gene-L8R42_003280;Name=L8R42_003280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003280 DAFVNP010000063.1 Protein Homology CDS 4544 5266 . - 0 ID=cds-HBQ7391334.1;Parent=gene-L8R42_003280;Dbxref=NCBI_GP:HBQ7391334.1;Name=HBQ7391334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=L8R42_003280;product=transcriptional regulator;protein_id=HBQ7391334.1;transl_table=11 DAFVNP010000063.1 tpg gene 5543 6361 . - . ID=gene-L8R42_003281;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=L8R42_003281 DAFVNP010000063.1 Protein Homology CDS 5543 6361 . - 0 ID=cds-HBQ7391335.1;Parent=gene-L8R42_003281;Dbxref=NCBI_GP:HBQ7391335.1;Name=HBQ7391335.1;gbkey=CDS;gene=fkpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=L8R42_003281;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HBQ7391335.1;transl_table=11 DAFVNP010000063.1 tpg gene 6581 6799 . + . ID=gene-L8R42_003282;Name=L8R42_003282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003282 DAFVNP010000063.1 Protein Homology CDS 6581 6799 . + 0 ID=cds-HBQ7391336.1;Parent=gene-L8R42_003282;Dbxref=NCBI_GP:HBQ7391336.1;Name=HBQ7391336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=L8R42_003282;product=protein SlyX;protein_id=HBQ7391336.1;transl_table=11 DAFVNP010000063.1 tpg gene 6988 7578 . - . ID=gene-L8R42_003283;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=L8R42_003283 DAFVNP010000063.1 Protein Homology CDS 6988 7578 . - 0 ID=cds-HBQ7391337.1;Parent=gene-L8R42_003283;Dbxref=NCBI_GP:HBQ7391337.1;Name=HBQ7391337.1;gbkey=CDS;gene=slyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=L8R42_003283;product=peptidylprolyl isomerase;protein_id=HBQ7391337.1;transl_table=11 DAFVNP010000063.1 tpg gene 7673 7873 . - . ID=gene-L8R42_003284;Name=L8R42_003284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003284 DAFVNP010000063.1 Protein Homology CDS 7673 7873 . - 0 ID=cds-HBQ7391338.1;Parent=gene-L8R42_003284;Dbxref=NCBI_GP:HBQ7391338.1;Name=HBQ7391338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=L8R42_003284;product=YheV family putative metal-binding protein;protein_id=HBQ7391338.1;transl_table=11 DAFVNP010000063.1 tpg gene 7883 9688 . - . ID=gene-L8R42_003285;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=L8R42_003285 DAFVNP010000063.1 Protein Homology CDS 7883 9688 . - 0 ID=cds-HBQ7391339.1;Parent=gene-L8R42_003285;Dbxref=NCBI_GP:HBQ7391339.1;Name=HBQ7391339.1;gbkey=CDS;gene=kefB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=L8R42_003285;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=HBQ7391339.1;transl_table=11 DAFVNP010000063.1 tpg gene 9688 10239 . - . ID=gene-L8R42_003286;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=L8R42_003286 DAFVNP010000063.1 Protein Homology CDS 9688 10239 . - 0 ID=cds-HBQ7391340.1;Parent=gene-L8R42_003286;Dbxref=NCBI_GP:HBQ7391340.1;Name=HBQ7391340.1;gbkey=CDS;gene=kefG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=L8R42_003286;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=HBQ7391340.1;transl_table=11 DAFVNP010000063.1 tpg gene 10505 12412 . + . ID=gene-L8R42_003287;Name=L8R42_003287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003287 DAFVNP010000063.1 Protein Homology CDS 10505 12412 . + 0 ID=cds-HBQ7391341.1;Parent=gene-L8R42_003287;Dbxref=NCBI_GP:HBQ7391341.1;Name=HBQ7391341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=L8R42_003287;product=ABC transporter ATP-binding protein;protein_id=HBQ7391341.1;transl_table=11 DAFVNP010000063.1 tpg gene 12575 12796 . + . ID=gene-L8R42_003288;Name=L8R42_003288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003288 DAFVNP010000063.1 Protein Homology CDS 12575 12796 . + 0 ID=cds-HBQ7391342.1;Parent=gene-L8R42_003288;Dbxref=NCBI_GP:HBQ7391342.1;Name=HBQ7391342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=L8R42_003288;product=LysR family transcriptional regulator;protein_id=HBQ7391342.1;transl_table=11 DAFVNP010000063.1 tpg gene 12798 13109 . - . ID=gene-L8R42_003289;Name=L8R42_003289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003289 DAFVNP010000063.1 Protein Homology CDS 12798 13109 . - 0 ID=cds-HBQ7391343.1;Parent=gene-L8R42_003289;Dbxref=NCBI_GP:HBQ7391343.1;Name=HBQ7391343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=L8R42_003289;product=monooxygenase;protein_id=HBQ7391343.1;transl_table=11 DAFVNP010000063.1 tpg gene 13307 14374 . + . ID=gene-L8R42_003290;Name=L8R42_003290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003290 DAFVNP010000063.1 Protein Homology CDS 13307 14374 . + 0 ID=cds-HBQ7391344.1;Parent=gene-L8R42_003290;Dbxref=NCBI_GP:HBQ7391344.1;Name=HBQ7391344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=L8R42_003290;product=hydrolase;protein_id=HBQ7391344.1;transl_table=11 DAFVNP010000063.1 tpg gene 14371 14589 . + . ID=gene-L8R42_003291;Name=L8R42_003291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003291 DAFVNP010000063.1 Protein Homology CDS 14371 14589 . + 0 ID=cds-HBQ7391345.1;Parent=gene-L8R42_003291;Dbxref=NCBI_GP:HBQ7391345.1;Name=HBQ7391345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462366.3;locus_tag=L8R42_003291;product=YheU family protein;protein_id=HBQ7391345.1;transl_table=11 DAFVNP010000063.1 tpg gene 14641 15510 . + . ID=gene-L8R42_003292;Name=L8R42_003292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003292 DAFVNP010000063.1 Protein Homology CDS 14641 15510 . + 0 ID=cds-HBQ7391346.1;Parent=gene-L8R42_003292;Dbxref=NCBI_GP:HBQ7391346.1;Name=HBQ7391346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=L8R42_003292;product=phosphoribulokinase;protein_id=HBQ7391346.1;transl_table=11 DAFVNP010000063.1 tpg gene 15606 16010 . - . ID=gene-L8R42_003293;Name=L8R42_003293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003293 DAFVNP010000063.1 Protein Homology CDS 15606 16010 . - 0 ID=cds-HBQ7391347.1;Parent=gene-L8R42_003293;Dbxref=NCBI_GP:HBQ7391347.1;Name=HBQ7391347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=L8R42_003293;product=OsmC family protein;protein_id=HBQ7391347.1;transl_table=11 DAFVNP010000063.1 tpg gene 16318 16950 . + . ID=gene-L8R42_003294;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=L8R42_003294 DAFVNP010000063.1 Protein Homology CDS 16318 16950 . + 0 ID=cds-HBQ7391348.1;Parent=gene-L8R42_003294;Dbxref=NCBI_GP:HBQ7391348.1;Name=HBQ7391348.1;gbkey=CDS;gene=crp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=L8R42_003294;product=cAMP-activated global transcriptional regulator CRP;protein_id=HBQ7391348.1;transl_table=11 DAFVNP010000063.1 tpg gene 16999 19086 . + . ID=gene-L8R42_003295;Name=L8R42_003295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003295 DAFVNP010000063.1 Protein Homology CDS 16999 19086 . + 0 ID=cds-HBQ7391349.1;Parent=gene-L8R42_003295;Dbxref=NCBI_GP:HBQ7391349.1;Name=HBQ7391349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=L8R42_003295;product=FUSC family protein;protein_id=HBQ7391349.1;transl_table=11 DAFVNP010000063.1 tpg gene 19129 20346 . - . ID=gene-L8R42_003296;Name=L8R42_003296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003296 DAFVNP010000063.1 Protein Homology CDS 19129 20346 . - 0 ID=cds-HBQ7391350.1;Parent=gene-L8R42_003296;Dbxref=NCBI_GP:HBQ7391350.1;Name=HBQ7391350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=L8R42_003296;product=aspartate aminotransferase family protein;protein_id=HBQ7391350.1;transl_table=11 DAFVNP010000063.1 tpg gene 20432 20995 . - . ID=gene-L8R42_003297;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=L8R42_003297 DAFVNP010000063.1 Protein Homology CDS 20432 20995 . - 0 ID=cds-HBQ7391351.1;Parent=gene-L8R42_003297;Dbxref=NCBI_GP:HBQ7391351.1;Name=HBQ7391351.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=L8R42_003297;product=aminodeoxychorismate synthase component 2;protein_id=HBQ7391351.1;transl_table=11 DAFVNP010000063.1 tpg gene 21027 21629 . - . ID=gene-L8R42_003298;Name=L8R42_003298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003298 DAFVNP010000063.1 Protein Homology CDS 21027 21629 . - 0 ID=cds-HBQ7391352.1;Parent=gene-L8R42_003298;Dbxref=NCBI_GP:HBQ7391352.1;Name=HBQ7391352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=L8R42_003298;product=putative adenosine monophosphate-protein transferase Fic;protein_id=HBQ7391352.1;transl_table=11 DAFVNP010000063.1 tpg gene 21619 21786 . - . ID=gene-L8R42_003299;Name=L8R42_003299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003299 DAFVNP010000063.1 Protein Homology CDS 21619 21786 . - 0 ID=cds-HBQ7391353.1;Parent=gene-L8R42_003299;Dbxref=NCBI_GP:HBQ7391353.1;Name=HBQ7391353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=L8R42_003299;product=YhfG family protein;protein_id=HBQ7391353.1;transl_table=11 DAFVNP010000063.1 tpg gene 21895 22467 . - . ID=gene-L8R42_003300;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=L8R42_003300 DAFVNP010000063.1 Protein Homology CDS 21895 22467 . - 0 ID=cds-HBQ7391354.1;Parent=gene-L8R42_003300;Dbxref=NCBI_GP:HBQ7391354.1;Name=HBQ7391354.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=L8R42_003300;product=peptidylprolyl isomerase A;protein_id=HBQ7391354.1;transl_table=11 DAFVNP010000063.1 tpg gene 22744 23925 . + . ID=gene-L8R42_003301;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=L8R42_003301 DAFVNP010000063.1 Protein Homology CDS 22744 23925 . + 0 ID=cds-HBQ7391355.1;Parent=gene-L8R42_003301;Dbxref=NCBI_GP:HBQ7391355.1;Name=HBQ7391355.1;gbkey=CDS;gene=tsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=L8R42_003301;product=MFS transporter TsgA;protein_id=HBQ7391355.1;transl_table=11 DAFVNP010000063.1 tpg gene 24187 26730 . + . ID=gene-L8R42_003302;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=L8R42_003302 DAFVNP010000063.1 Protein Homology CDS 24187 26730 . + 0 ID=cds-HBQ7391356.1;Parent=gene-L8R42_003302;Dbxref=NCBI_GP:HBQ7391356.1;Name=HBQ7391356.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=L8R42_003302;product=NADPH-nitrite reductase large subunit;protein_id=HBQ7391356.1;transl_table=11 DAFVNP010000063.1 tpg gene 26727 27053 . + . ID=gene-L8R42_003303;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=L8R42_003303 DAFVNP010000063.1 Protein Homology CDS 26727 27053 . + 0 ID=cds-HBQ7391357.1;Parent=gene-L8R42_003303;Dbxref=NCBI_GP:HBQ7391357.1;Name=HBQ7391357.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=L8R42_003303;product=nitrite reductase small subunit NirD;protein_id=HBQ7391357.1;transl_table=11 DAFVNP010000063.1 tpg gene 27318 28127 . + . ID=gene-L8R42_003304;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=L8R42_003304 DAFVNP010000063.1 Protein Homology CDS 27318 28127 . + 0 ID=cds-HBQ7391358.1;Parent=gene-L8R42_003304;Dbxref=NCBI_GP:HBQ7391358.1;Name=HBQ7391358.1;gbkey=CDS;gene=nirC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442185.1;locus_tag=L8R42_003304;product=nitrite transporter NirC;protein_id=HBQ7391358.1;transl_table=11 DAFVNP010000063.1 tpg gene 28139 29504 . + . ID=gene-L8R42_003305;Name=cobA;end_range=29504,.;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=L8R42_003305;partial=true DAFVNP010000063.1 Protein Homology CDS 28139 29504 . + 0 ID=cds-HBQ7391359.1;Parent=gene-L8R42_003305;Dbxref=NCBI_GP:HBQ7391359.1;Name=HBQ7391359.1;end_range=29504,.;gbkey=CDS;gene=cobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=L8R42_003305;partial=true;product=uroporphyrinogen-III C-methyltransferase;protein_id=HBQ7391359.1;transl_table=11 ##sequence-region DAFVNP010000064.1 1 29222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000064.1 tpg region 1 29222 . + . ID=DAFVNP010000064.1:1..29222;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000064.1 tpg gene 60 407 . + . ID=gene-L8R42_003306;Name=L8R42_003306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003306 DAFVNP010000064.1 Protein Homology CDS 60 407 . + 0 ID=cds-HBQ7391360.1;Parent=gene-L8R42_003306;Dbxref=NCBI_GP:HBQ7391360.1;Name=HBQ7391360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=L8R42_003306;product=DNA-binding protein;protein_id=HBQ7391360.1;transl_table=11 DAFVNP010000064.1 tpg gene 538 1887 . - . ID=gene-L8R42_003307;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=L8R42_003307 DAFVNP010000064.1 Protein Homology CDS 538 1887 . - 0 ID=cds-HBQ7391361.1;Parent=gene-L8R42_003307;Dbxref=NCBI_GP:HBQ7391361.1;Name=HBQ7391361.1;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=L8R42_003307;product=lysine-sensitive aspartokinase 3;protein_id=HBQ7391361.1;transl_table=11 DAFVNP010000064.1 tpg gene 2232 3881 . + . ID=gene-L8R42_003308;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=L8R42_003308 DAFVNP010000064.1 Protein Homology CDS 2232 3881 . + 0 ID=cds-HBQ7391362.1;Parent=gene-L8R42_003308;Dbxref=NCBI_GP:HBQ7391362.1;Name=HBQ7391362.1;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=L8R42_003308;product=glucose-6-phosphate isomerase;protein_id=HBQ7391362.1;transl_table=11 DAFVNP010000064.1 tpg gene 4325 4567 . + . ID=gene-L8R42_003309;Name=L8R42_003309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003309 DAFVNP010000064.1 Protein Homology CDS 4325 4567 . + 0 ID=cds-HBQ7391363.1;Parent=gene-L8R42_003309;Dbxref=NCBI_GP:HBQ7391363.1;Name=HBQ7391363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=L8R42_003309;product=outer membrane protein;protein_id=HBQ7391363.1;transl_table=11 DAFVNP010000064.1 tpg gene 4631 5269 . + . ID=gene-L8R42_003310;Name=L8R42_003310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003310 DAFVNP010000064.1 Protein Homology CDS 4631 5269 . + 0 ID=cds-HBQ7391364.1;Parent=gene-L8R42_003310;Dbxref=NCBI_GP:HBQ7391364.1;Name=HBQ7391364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=L8R42_003310;product=YjbF family lipoprotein;protein_id=HBQ7391364.1;transl_table=11 DAFVNP010000064.1 tpg gene 5266 6003 . + . ID=gene-L8R42_003311;Name=L8R42_003311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003311 DAFVNP010000064.1 Protein Homology CDS 5266 6003 . + 0 ID=cds-HBQ7391365.1;Parent=gene-L8R42_003311;Dbxref=NCBI_GP:HBQ7391365.1;Name=HBQ7391365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=L8R42_003311;product=capsule biosynthesis GfcC family protein;protein_id=HBQ7391365.1;transl_table=11 DAFVNP010000064.1 tpg gene 6003 8099 . + . ID=gene-L8R42_003312;Name=L8R42_003312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003312 DAFVNP010000064.1 Protein Homology CDS 6003 8099 . + 0 ID=cds-HBQ7391366.1;Parent=gene-L8R42_003312;Dbxref=NCBI_GP:HBQ7391366.1;Name=HBQ7391366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=L8R42_003312;product=YjbH domain-containing protein;protein_id=HBQ7391366.1;transl_table=11 DAFVNP010000064.1 tpg gene 8242 8652 . + . ID=gene-L8R42_003313;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=L8R42_003313 DAFVNP010000064.1 Protein Homology CDS 8242 8652 . + 0 ID=cds-HBQ7391367.1;Parent=gene-L8R42_003313;Dbxref=NCBI_GP:HBQ7391367.1;Name=HBQ7391367.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=L8R42_003313;product=phosphate-starvation-inducible protein PsiE;protein_id=HBQ7391367.1;transl_table=11 DAFVNP010000064.1 tpg gene 8818 9708 . - . ID=gene-L8R42_003314;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=L8R42_003314 DAFVNP010000064.1 Protein Homology CDS 8818 9708 . - 0 ID=cds-HBQ7391368.1;Parent=gene-L8R42_003314;Dbxref=NCBI_GP:HBQ7391368.1;Name=HBQ7391368.1;gbkey=CDS;gene=malG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=L8R42_003314;product=maltose ABC transporter permease MalG;protein_id=HBQ7391368.1;transl_table=11 DAFVNP010000064.1 tpg gene 9723 11267 . - . ID=gene-L8R42_003315;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=L8R42_003315 DAFVNP010000064.1 Protein Homology CDS 9723 11267 . - 0 ID=cds-HBQ7391369.1;Parent=gene-L8R42_003315;Dbxref=NCBI_GP:HBQ7391369.1;Name=HBQ7391369.1;gbkey=CDS;gene=malF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=L8R42_003315;product=maltose ABC transporter permease MalF;protein_id=HBQ7391369.1;transl_table=11 DAFVNP010000064.1 tpg gene 11399 12589 . - . ID=gene-L8R42_003316;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=L8R42_003316 DAFVNP010000064.1 Protein Homology CDS 11399 12589 . - 0 ID=cds-HBQ7391370.1;Parent=gene-L8R42_003316;Dbxref=NCBI_GP:HBQ7391370.1;Name=HBQ7391370.1;gbkey=CDS;gene=malE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=L8R42_003316;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=HBQ7391370.1;transl_table=11 DAFVNP010000064.1 tpg gene 12951 14060 . + . ID=gene-L8R42_003317;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=L8R42_003317 DAFVNP010000064.1 Protein Homology CDS 12951 14060 . + 0 ID=cds-HBQ7391371.1;Parent=gene-L8R42_003317;Dbxref=NCBI_GP:HBQ7391371.1;Name=HBQ7391371.1;gbkey=CDS;gene=malK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=L8R42_003317;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=HBQ7391371.1;transl_table=11 DAFVNP010000064.1 tpg gene 14148 15506 . + . ID=gene-L8R42_003318;Name=L8R42_003318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003318 DAFVNP010000064.1 Protein Homology CDS 14148 15506 . + 0 ID=cds-HBQ7391372.1;Parent=gene-L8R42_003318;Dbxref=NCBI_GP:HBQ7391372.1;Name=HBQ7391372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=L8R42_003318;product=maltoporin;protein_id=HBQ7391372.1;transl_table=11 DAFVNP010000064.1 tpg gene 15670 16587 . + . ID=gene-L8R42_003319;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=L8R42_003319 DAFVNP010000064.1 Protein Homology CDS 15670 16587 . + 0 ID=cds-HBQ7391373.1;Parent=gene-L8R42_003319;Dbxref=NCBI_GP:HBQ7391373.1;Name=HBQ7391373.1;gbkey=CDS;gene=malM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=L8R42_003319;product=maltose operon protein MalM;protein_id=HBQ7391373.1;transl_table=11 DAFVNP010000064.1 tpg gene 16768 17265 . + . ID=gene-L8R42_003320;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=L8R42_003320 DAFVNP010000064.1 Protein Homology CDS 16768 17265 . + 0 ID=cds-HBQ7391374.1;Parent=gene-L8R42_003320;Dbxref=NCBI_GP:HBQ7391374.1;Name=HBQ7391374.1;gbkey=CDS;gene=ubiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=L8R42_003320;product=chorismate lyase;protein_id=HBQ7391374.1;transl_table=11 DAFVNP010000064.1 tpg gene 17279 18151 . + . ID=gene-L8R42_003321;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=L8R42_003321 DAFVNP010000064.1 Protein Homology CDS 17279 18151 . + 0 ID=cds-HBQ7391375.1;Parent=gene-L8R42_003321;Dbxref=NCBI_GP:HBQ7391375.1;Name=HBQ7391375.1;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=L8R42_003321;product=4-hydroxybenzoate octaprenyltransferase;protein_id=HBQ7391375.1;transl_table=11 DAFVNP010000064.1 tpg gene 18250 20670 . - . ID=gene-L8R42_003322;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=L8R42_003322 DAFVNP010000064.1 Protein Homology CDS 18250 20670 . - 0 ID=cds-HBQ7391376.1;Parent=gene-L8R42_003322;Dbxref=NCBI_GP:HBQ7391376.1;Name=HBQ7391376.1;gbkey=CDS;gene=plsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=L8R42_003322;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=HBQ7391376.1;transl_table=11 DAFVNP010000064.1 tpg gene 20841 21209 . + . ID=gene-L8R42_003323;Name=L8R42_003323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003323 DAFVNP010000064.1 Protein Homology CDS 20841 21209 . + 0 ID=cds-HBQ7391377.1;Parent=gene-L8R42_003323;Dbxref=NCBI_GP:HBQ7391377.1;Name=HBQ7391377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=L8R42_003323;product=diacylglycerol kinase;protein_id=HBQ7391377.1;transl_table=11 DAFVNP010000064.1 tpg gene 21318 21926 . + . ID=gene-L8R42_003324;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=L8R42_003324 DAFVNP010000064.1 Protein Homology CDS 21318 21926 . + 0 ID=cds-HBQ7391378.1;Parent=gene-L8R42_003324;Dbxref=NCBI_GP:HBQ7391378.1;Name=HBQ7391378.1;gbkey=CDS;gene=lexA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=L8R42_003324;product=repressor LexA;protein_id=HBQ7391378.1;transl_table=11 DAFVNP010000064.1 tpg gene 22105 23430 . + . ID=gene-L8R42_003325;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=L8R42_003325 DAFVNP010000064.1 Protein Homology CDS 22105 23430 . + 0 ID=cds-HBQ7391379.1;Parent=gene-L8R42_003325;Dbxref=NCBI_GP:HBQ7391379.1;Name=HBQ7391379.1;gbkey=CDS;gene=dinF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=L8R42_003325;product=MATE family efflux transporter DinF;protein_id=HBQ7391379.1;transl_table=11 DAFVNP010000064.1 tpg gene 23427 23540 . + . ID=gene-L8R42_003326;Name=L8R42_003326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003326 DAFVNP010000064.1 Protein Homology CDS 23427 23540 . + 0 ID=cds-HBQ7391380.1;Parent=gene-L8R42_003326;Dbxref=NCBI_GP:HBQ7391380.1;Name=HBQ7391380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=L8R42_003326;product=hypothetical protein;protein_id=HBQ7391380.1;transl_table=11 DAFVNP010000064.1 tpg gene 23562 23771 . + . ID=gene-L8R42_003327;Name=L8R42_003327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003327 DAFVNP010000064.1 Protein Homology CDS 23562 23771 . + 0 ID=cds-HBQ7391381.1;Parent=gene-L8R42_003327;Dbxref=NCBI_GP:HBQ7391381.1;Name=HBQ7391381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=L8R42_003327;product=CsbD family protein;protein_id=HBQ7391381.1;transl_table=11 DAFVNP010000064.1 tpg gene 23871 24386 . - . ID=gene-L8R42_003328;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=L8R42_003328 DAFVNP010000064.1 Protein Homology CDS 23871 24386 . - 0 ID=cds-HBQ7391382.1;Parent=gene-L8R42_003328;Dbxref=NCBI_GP:HBQ7391382.1;Name=HBQ7391382.1;gbkey=CDS;gene=zur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=L8R42_003328;product=zinc uptake transcriptional repressor Zur;protein_id=HBQ7391382.1;transl_table=11 DAFVNP010000064.1 tpg gene 24633 25943 . + . ID=gene-L8R42_003329;Name=L8R42_003329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003329 DAFVNP010000064.1 Protein Homology CDS 24633 25943 . + 0 ID=cds-HBQ7391383.1;Parent=gene-L8R42_003329;Dbxref=NCBI_GP:HBQ7391383.1;Name=HBQ7391383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=L8R42_003329;product=conjugal transfer protein TraF;protein_id=HBQ7391383.1;transl_table=11 DAFVNP010000064.1 tpg gene 26031 27029 . + . ID=gene-L8R42_003330;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=L8R42_003330 DAFVNP010000064.1 Protein Homology CDS 26031 27029 . + 0 ID=cds-HBQ7391384.1;Parent=gene-L8R42_003330;Dbxref=NCBI_GP:HBQ7391384.1;Name=HBQ7391384.1;gbkey=CDS;gene=dusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=L8R42_003330;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=HBQ7391384.1;transl_table=11 DAFVNP010000064.1 tpg gene 27197 27439 . + . ID=gene-L8R42_003331;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=L8R42_003331 DAFVNP010000064.1 Protein Homology CDS 27197 27439 . + 0 ID=cds-HBQ7391385.1;Parent=gene-L8R42_003331;Dbxref=NCBI_GP:HBQ7391385.1;Name=HBQ7391385.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=L8R42_003331;product=envelope stress response protein PspG;protein_id=HBQ7391385.1;transl_table=11 DAFVNP010000064.1 tpg gene 27614 28597 . - . ID=gene-L8R42_003332;Name=L8R42_003332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003332 DAFVNP010000064.1 Protein Homology CDS 27614 28597 . - 0 ID=cds-HBQ7391386.1;Parent=gene-L8R42_003332;Dbxref=NCBI_GP:HBQ7391386.1;Name=HBQ7391386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=L8R42_003332;product=quinone oxidoreductase;protein_id=HBQ7391386.1;transl_table=11 DAFVNP010000064.1 tpg gene 28662 29222 . + . ID=gene-L8R42_003333;Name=L8R42_003333;end_range=29222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003333;partial=true DAFVNP010000064.1 Protein Homology CDS 28662 29222 . + 0 ID=cds-HBQ7391387.1;Parent=gene-L8R42_003333;Dbxref=NCBI_GP:HBQ7391387.1;Name=HBQ7391387.1;Note=unwinds double stranded DNA;end_range=29222,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=L8R42_003333;partial=true;product=replicative DNA helicase;protein_id=HBQ7391387.1;transl_table=11 ##sequence-region DAFVNP010000065.1 1 29018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000065.1 tpg region 1 29018 . + . ID=DAFVNP010000065.1:1..29018;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000065.1 tpg gene 1 970 . - . ID=gene-L8R42_003334;Name=L8R42_003334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003334;partial=true;start_range=.,1 DAFVNP010000065.1 Protein Homology CDS 1 970 . - 0 ID=cds-HBQ7391388.1;Parent=gene-L8R42_003334;Dbxref=NCBI_GP:HBQ7391388.1;Name=HBQ7391388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936591.1;locus_tag=L8R42_003334;partial=true;product=O-antigen polymerase;protein_id=HBQ7391388.1;start_range=.,1;transl_table=11 DAFVNP010000065.1 tpg gene 1064 2107 . - . ID=gene-L8R42_003335;Name=L8R42_003335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003335 DAFVNP010000065.1 Protein Homology CDS 1064 2107 . - 0 ID=cds-HBQ7391389.1;Parent=gene-L8R42_003335;Dbxref=NCBI_GP:HBQ7391389.1;Name=HBQ7391389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100432.1;locus_tag=L8R42_003335;product=glycosyltransferase family 2 protein;protein_id=HBQ7391389.1;transl_table=11 DAFVNP010000065.1 tpg gene 2109 2723 . - . ID=gene-L8R42_003336;Name=L8R42_003336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003336 DAFVNP010000065.1 Protein Homology CDS 2109 2723 . - 0 ID=cds-HBQ7391390.1;Parent=gene-L8R42_003336;Dbxref=NCBI_GP:HBQ7391390.1;Name=HBQ7391390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669240.1;locus_tag=L8R42_003336;product=transferase;protein_id=HBQ7391390.1;transl_table=11 DAFVNP010000065.1 tpg gene 2770 3732 . - . ID=gene-L8R42_003337;Name=L8R42_003337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003337 DAFVNP010000065.1 Protein Homology CDS 2770 3732 . - 0 ID=cds-HBQ7391391.1;Parent=gene-L8R42_003337;Dbxref=NCBI_GP:HBQ7391391.1;Name=HBQ7391391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038917.1;locus_tag=L8R42_003337;product=glycosyltransferase family 2 protein;protein_id=HBQ7391391.1;transl_table=11 DAFVNP010000065.1 tpg gene 3725 5065 . - . ID=gene-L8R42_003338;Name=L8R42_003338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003338 DAFVNP010000065.1 Protein Homology CDS 3725 5065 . - 0 ID=cds-HBQ7391392.1;Parent=gene-L8R42_003338;Dbxref=NCBI_GP:HBQ7391392.1;Name=HBQ7391392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079813.1;locus_tag=L8R42_003338;product=hypothetical protein;protein_id=HBQ7391392.1;transl_table=11 DAFVNP010000065.1 tpg gene 5065 5946 . - . ID=gene-L8R42_003339;Name=rfbJ;gbkey=Gene;gene=rfbJ;gene_biotype=protein_coding;locus_tag=L8R42_003339 DAFVNP010000065.1 Protein Homology CDS 5065 5946 . - 0 ID=cds-HBQ7391393.1;Parent=gene-L8R42_003339;Dbxref=NCBI_GP:HBQ7391393.1;Name=HBQ7391393.1;gbkey=CDS;gene=rfbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887844.1;locus_tag=L8R42_003339;product=CDP-abequose synthase;protein_id=HBQ7391393.1;transl_table=11 DAFVNP010000065.1 tpg gene 5960 7273 . - . ID=gene-L8R42_003340;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=L8R42_003340 DAFVNP010000065.1 Protein Homology CDS 5960 7273 . - 0 ID=cds-HBQ7391394.1;Parent=gene-L8R42_003340;Dbxref=NCBI_GP:HBQ7391394.1;Name=HBQ7391394.1;gbkey=CDS;gene=rfbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=L8R42_003340;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=HBQ7391394.1;transl_table=11 DAFVNP010000065.1 tpg gene 7300 8379 . - . ID=gene-L8R42_003341;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=L8R42_003341 DAFVNP010000065.1 Protein Homology CDS 7300 8379 . - 0 ID=cds-HBQ7391395.1;Parent=gene-L8R42_003341;Dbxref=NCBI_GP:HBQ7391395.1;Name=HBQ7391395.1;gbkey=CDS;gene=rfbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=L8R42_003341;product=CDP-glucose 4%2C6-dehydratase;protein_id=HBQ7391395.1;transl_table=11 DAFVNP010000065.1 tpg gene 8384 9157 . - . ID=gene-L8R42_003342;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=L8R42_003342 DAFVNP010000065.1 Protein Homology CDS 8384 9157 . - 0 ID=cds-HBQ7391396.1;Parent=gene-L8R42_003342;Dbxref=NCBI_GP:HBQ7391396.1;Name=HBQ7391396.1;gbkey=CDS;gene=rfbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=L8R42_003342;product=glucose-1-phosphate cytidylyltransferase;protein_id=HBQ7391396.1;transl_table=11 DAFVNP010000065.1 tpg gene 9173 10147 . - . ID=gene-L8R42_003343;Name=L8R42_003343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003343 DAFVNP010000065.1 Protein Homology CDS 9173 10147 . - 0 ID=cds-HBQ7391397.1;Parent=gene-L8R42_003343;Dbxref=NCBI_GP:HBQ7391397.1;Name=HBQ7391397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018225.1;locus_tag=L8R42_003343;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=HBQ7391397.1;transl_table=11 DAFVNP010000065.1 tpg gene 10153 10704 . - . ID=gene-L8R42_003344;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=L8R42_003344 DAFVNP010000065.1 Protein Homology CDS 10153 10704 . - 0 ID=cds-HBQ7391398.1;Parent=gene-L8R42_003344;Dbxref=NCBI_GP:HBQ7391398.1;Name=HBQ7391398.1;gbkey=CDS;gene=rfbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=L8R42_003344;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=HBQ7391398.1;transl_table=11 DAFVNP010000065.1 tpg gene 10705 11583 . - . ID=gene-L8R42_003345;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=L8R42_003345 DAFVNP010000065.1 Protein Homology CDS 10705 11583 . - 0 ID=cds-HBQ7391399.1;Parent=gene-L8R42_003345;Dbxref=NCBI_GP:HBQ7391399.1;Name=HBQ7391399.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=L8R42_003345;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=HBQ7391399.1;transl_table=11 DAFVNP010000065.1 tpg gene 11631 12530 . - . ID=gene-L8R42_003346;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=L8R42_003346 DAFVNP010000065.1 Protein Homology CDS 11631 12530 . - 0 ID=cds-HBQ7391400.1;Parent=gene-L8R42_003346;Dbxref=NCBI_GP:HBQ7391400.1;Name=HBQ7391400.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=L8R42_003346;product=dTDP-4-dehydrorhamnose reductase;protein_id=HBQ7391400.1;transl_table=11 DAFVNP010000065.1 tpg gene 12530 13615 . - . ID=gene-L8R42_003347;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=L8R42_003347 DAFVNP010000065.1 Protein Homology CDS 12530 13615 . - 0 ID=cds-HBQ7391401.1;Parent=gene-L8R42_003347;Dbxref=NCBI_GP:HBQ7391401.1;Name=HBQ7391401.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=L8R42_003347;product=dTDP-glucose 4%2C6-dehydratase;protein_id=HBQ7391401.1;transl_table=11 DAFVNP010000065.1 tpg gene 13992 14885 . - . ID=gene-L8R42_003348;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=L8R42_003348 DAFVNP010000065.1 Protein Homology CDS 13992 14885 . - 0 ID=cds-HBQ7391402.1;Parent=gene-L8R42_003348;Dbxref=NCBI_GP:HBQ7391402.1;Name=HBQ7391402.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=L8R42_003348;product=GalU regulator GalF;protein_id=HBQ7391402.1;transl_table=11 DAFVNP010000065.1 tpg gene 15063 16466 . - . ID=gene-L8R42_003349;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=L8R42_003349 DAFVNP010000065.1 Protein Homology CDS 15063 16466 . - 0 ID=cds-HBQ7391403.1;Parent=gene-L8R42_003349;Dbxref=NCBI_GP:HBQ7391403.1;Name=HBQ7391403.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=L8R42_003349;product=colanic acid biosynthesis protein WcaM;protein_id=HBQ7391403.1;transl_table=11 DAFVNP010000065.1 tpg gene 16477 17697 . - . ID=gene-L8R42_003350;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=L8R42_003350 DAFVNP010000065.1 Protein Homology CDS 16477 17697 . - 0 ID=cds-HBQ7391404.1;Parent=gene-L8R42_003350;Dbxref=NCBI_GP:HBQ7391404.1;Name=HBQ7391404.1;gbkey=CDS;gene=wcaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=L8R42_003350;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=HBQ7391404.1;transl_table=11 DAFVNP010000065.1 tpg gene 17694 18974 . - . ID=gene-L8R42_003351;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=L8R42_003351 DAFVNP010000065.1 Protein Homology CDS 17694 18974 . - 0 ID=cds-HBQ7391405.1;Parent=gene-L8R42_003351;Dbxref=NCBI_GP:HBQ7391405.1;Name=HBQ7391405.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=L8R42_003351;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=HBQ7391405.1;transl_table=11 DAFVNP010000065.1 tpg gene 18996 20474 . - . ID=gene-L8R42_003352;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=L8R42_003352 DAFVNP010000065.1 Protein Homology CDS 18996 20474 . - 0 ID=cds-HBQ7391406.1;Parent=gene-L8R42_003352;Dbxref=NCBI_GP:HBQ7391406.1;Name=HBQ7391406.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=L8R42_003352;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=HBQ7391406.1;transl_table=11 DAFVNP010000065.1 tpg gene 20576 21970 . - . ID=gene-L8R42_003353;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=L8R42_003353 DAFVNP010000065.1 Protein Homology CDS 20576 21970 . - 0 ID=cds-HBQ7391407.1;Parent=gene-L8R42_003353;Dbxref=NCBI_GP:HBQ7391407.1;Name=HBQ7391407.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=L8R42_003353;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=HBQ7391407.1;transl_table=11 DAFVNP010000065.1 tpg gene 22024 23394 . - . ID=gene-L8R42_003354;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=L8R42_003354 DAFVNP010000065.1 Protein Homology CDS 22024 23394 . - 0 ID=cds-HBQ7391408.1;Parent=gene-L8R42_003354;Dbxref=NCBI_GP:HBQ7391408.1;Name=HBQ7391408.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=L8R42_003354;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=HBQ7391408.1;transl_table=11 DAFVNP010000065.1 tpg gene 23505 24947 . - . ID=gene-L8R42_003355;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=L8R42_003355 DAFVNP010000065.1 Protein Homology CDS 23505 24947 . - 0 ID=cds-HBQ7391409.1;Parent=gene-L8R42_003355;Dbxref=NCBI_GP:HBQ7391409.1;Name=HBQ7391409.1;gbkey=CDS;gene=cpsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=L8R42_003355;product=mannose-1-phosphate guanyltransferase;protein_id=HBQ7391409.1;transl_table=11 DAFVNP010000065.1 tpg gene 24944 26167 . - . ID=gene-L8R42_003356;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=L8R42_003356 DAFVNP010000065.1 Protein Homology CDS 24944 26167 . - 0 ID=cds-HBQ7391410.1;Parent=gene-L8R42_003356;Dbxref=NCBI_GP:HBQ7391410.1;Name=HBQ7391410.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=L8R42_003356;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=HBQ7391410.1;transl_table=11 DAFVNP010000065.1 tpg gene 26164 26637 . - . ID=gene-L8R42_003357;Name=L8R42_003357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003357 DAFVNP010000065.1 Protein Homology CDS 26164 26637 . - 0 ID=cds-HBQ7391411.1;Parent=gene-L8R42_003357;Dbxref=NCBI_GP:HBQ7391411.1;Name=HBQ7391411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461052.3;locus_tag=L8R42_003357;product=GDP-mannose mannosyl hydrolase;protein_id=HBQ7391411.1;transl_table=11 DAFVNP010000065.1 tpg gene 26640 27605 . - . ID=gene-L8R42_003358;Name=L8R42_003358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003358 DAFVNP010000065.1 Protein Homology CDS 26640 27605 . - 0 ID=cds-HBQ7391412.1;Parent=gene-L8R42_003358;Dbxref=NCBI_GP:HBQ7391412.1;Name=HBQ7391412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=L8R42_003358;product=GDP-L-fucose synthase;protein_id=HBQ7391412.1;transl_table=11 DAFVNP010000065.1 tpg gene 27608 28729 . - . ID=gene-L8R42_003359;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=L8R42_003359 DAFVNP010000065.1 Protein Homology CDS 27608 28729 . - 0 ID=cds-HBQ7391413.1;Parent=gene-L8R42_003359;Dbxref=NCBI_GP:HBQ7391413.1;Name=HBQ7391413.1;gbkey=CDS;gene=gmd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=L8R42_003359;product=GDP-mannose 4%2C6-dehydratase;protein_id=HBQ7391413.1;transl_table=11 DAFVNP010000065.1 tpg gene 28753 29018 . - . ID=gene-L8R42_003360;Name=L8R42_003360;end_range=29018,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003360;partial=true DAFVNP010000065.1 Protein Homology CDS 28753 29018 . - 2 ID=cds-HBQ7391414.1;Parent=gene-L8R42_003360;Dbxref=NCBI_GP:HBQ7391414.1;Name=HBQ7391414.1;end_range=29018,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=L8R42_003360;partial=true;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=HBQ7391414.1;transl_table=11 ##sequence-region DAFVNP010000066.1 1 28279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000066.1 tpg region 1 28279 . + . ID=DAFVNP010000066.1:1..28279;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000066.1 tpg gene 441 752 . + . ID=gene-L8R42_003361;Name=L8R42_003361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003361 DAFVNP010000066.1 Protein Homology CDS 441 752 . + 0 ID=cds-HBQ7391415.1;Parent=gene-L8R42_003361;Dbxref=NCBI_GP:HBQ7391415.1;Name=HBQ7391415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107428.1;locus_tag=L8R42_003361;product=hypothetical protein;protein_id=HBQ7391415.1;transl_table=11 DAFVNP010000066.1 tpg gene 832 1527 . + . ID=gene-L8R42_003362;Name=L8R42_003362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003362 DAFVNP010000066.1 Protein Homology CDS 832 1527 . + 0 ID=cds-HBQ7391416.1;Parent=gene-L8R42_003362;Dbxref=NCBI_GP:HBQ7391416.1;Name=HBQ7391416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=L8R42_003362;product=phosphohydrolase;protein_id=HBQ7391416.1;transl_table=11 DAFVNP010000066.1 tpg gene 1601 3031 . + . ID=gene-L8R42_003363;Name=L8R42_003363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003363 DAFVNP010000066.1 Protein Homology CDS 1601 3031 . + 0 ID=cds-HBQ7391417.1;Parent=gene-L8R42_003363;Dbxref=NCBI_GP:HBQ7391417.1;Name=HBQ7391417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=L8R42_003363;product=DNA cytosine methyltransferase;protein_id=HBQ7391417.1;transl_table=11 DAFVNP010000066.1 tpg gene 3012 3482 . + . ID=gene-L8R42_003364;Name=L8R42_003364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003364 DAFVNP010000066.1 Protein Homology CDS 3012 3482 . + 0 ID=cds-HBQ7391418.1;Parent=gene-L8R42_003364;Dbxref=NCBI_GP:HBQ7391418.1;Name=HBQ7391418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=L8R42_003364;product=very short patch repair endonuclease;protein_id=HBQ7391418.1;transl_table=11 DAFVNP010000066.1 tpg gene 3471 4391 . - . ID=gene-L8R42_003365;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=L8R42_003365 DAFVNP010000066.1 Protein Homology CDS 3471 4391 . - 0 ID=cds-HBQ7391419.1;Parent=gene-L8R42_003365;Dbxref=NCBI_GP:HBQ7391419.1;Name=HBQ7391419.1;gbkey=CDS;gene=yedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=L8R42_003365;product=drug/metabolite exporter YedA;protein_id=HBQ7391419.1;transl_table=11 DAFVNP010000066.1 tpg gene 4561 5478 . + . ID=gene-L8R42_003366;Name=L8R42_003366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003366 DAFVNP010000066.1 Protein Homology CDS 4561 5478 . + 0 ID=cds-HBQ7391420.1;Parent=gene-L8R42_003366;Dbxref=NCBI_GP:HBQ7391420.1;Name=HBQ7391420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=L8R42_003366;product=DUF808 domain-containing protein;protein_id=HBQ7391420.1;transl_table=11 DAFVNP010000066.1 tpg gene 5555 5740 . + . ID=gene-L8R42_003367;Name=L8R42_003367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003367 DAFVNP010000066.1 Protein Homology CDS 5555 5740 . + 0 ID=cds-HBQ7391421.1;Parent=gene-L8R42_003367;Dbxref=NCBI_GP:HBQ7391421.1;Name=HBQ7391421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=L8R42_003367;product=YodC family protein;protein_id=HBQ7391421.1;transl_table=11 DAFVNP010000066.1 tpg gene 5905 7617 . + . ID=gene-L8R42_003368;Name=yedQ;gbkey=Gene;gene=yedQ;gene_biotype=protein_coding;locus_tag=L8R42_003368 DAFVNP010000066.1 Protein Homology CDS 5905 7617 . + 0 ID=cds-HBQ7391422.1;Parent=gene-L8R42_003368;Dbxref=NCBI_GP:HBQ7391422.1;Name=HBQ7391422.1;gbkey=CDS;gene=yedQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=L8R42_003368;product=cellulose biosynthesis regulator YedQ;protein_id=HBQ7391422.1;transl_table=11 DAFVNP010000066.1 tpg gene 7596 8411 . - . ID=gene-L8R42_003369;Name=L8R42_003369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003369 DAFVNP010000066.1 Protein Homology CDS 7596 8411 . - 0 ID=cds-HBQ7391423.1;Parent=gene-L8R42_003369;Dbxref=NCBI_GP:HBQ7391423.1;Name=HBQ7391423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=L8R42_003369;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=HBQ7391423.1;transl_table=11 DAFVNP010000066.1 tpg gene 8721 8948 . - . ID=gene-L8R42_003370;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=L8R42_003370 DAFVNP010000066.1 Protein Homology CDS 8721 8948 . - 0 ID=cds-HBQ7391424.1;Parent=gene-L8R42_003370;Dbxref=NCBI_GP:HBQ7391424.1;Name=HBQ7391424.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=L8R42_003370;product=YodD family peroxide/acid resistance protein;protein_id=HBQ7391424.1;transl_table=11 DAFVNP010000066.1 tpg gene 9077 9271 . + . ID=gene-L8R42_003371;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=L8R42_003371 DAFVNP010000066.1 Protein Homology CDS 9077 9271 . + 0 ID=cds-HBQ7391425.1;Parent=gene-L8R42_003371;Dbxref=NCBI_GP:HBQ7391425.1;Name=HBQ7391425.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=L8R42_003371;product=protein DsrB;protein_id=HBQ7391425.1;transl_table=11 DAFVNP010000066.1 tpg gene 9310 9933 . - . ID=gene-L8R42_003372;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=L8R42_003372 DAFVNP010000066.1 Protein Homology CDS 9310 9933 . - 0 ID=cds-HBQ7391426.1;Parent=gene-L8R42_003372;Dbxref=NCBI_GP:HBQ7391426.1;Name=HBQ7391426.1;gbkey=CDS;gene=rcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=L8R42_003372;product=transcriptional regulator RcsA;protein_id=HBQ7391426.1;transl_table=11 DAFVNP010000066.1 tpg gene 10215 11009 . - . ID=gene-L8R42_003373;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=L8R42_003373 DAFVNP010000066.1 Protein Homology CDS 10215 11009 . - 0 ID=cds-HBQ7391427.1;Parent=gene-L8R42_003373;Dbxref=NCBI_GP:HBQ7391427.1;Name=HBQ7391427.1;gbkey=CDS;gene=fliR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=L8R42_003373;product=flagellar type III secretion system protein FliR;protein_id=HBQ7391427.1;transl_table=11 DAFVNP010000066.1 tpg gene 11018 11287 . - . ID=gene-L8R42_003374;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=L8R42_003374 DAFVNP010000066.1 Protein Homology CDS 11018 11287 . - 0 ID=cds-HBQ7391428.1;Parent=gene-L8R42_003374;Dbxref=NCBI_GP:HBQ7391428.1;Name=HBQ7391428.1;gbkey=CDS;gene=fliQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=L8R42_003374;product=flagellar biosynthesis protein FliQ;protein_id=HBQ7391428.1;transl_table=11 DAFVNP010000066.1 tpg gene 11297 12034 . - . ID=gene-L8R42_003375;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=L8R42_003375 DAFVNP010000066.1 Protein Homology CDS 11297 12034 . - 0 ID=cds-HBQ7391429.1;Parent=gene-L8R42_003375;Dbxref=NCBI_GP:HBQ7391429.1;Name=HBQ7391429.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;gbkey=CDS;gene=fliP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=L8R42_003375;product=flagellar type III secretion system pore protein FliP;protein_id=HBQ7391429.1;transl_table=11 DAFVNP010000066.1 tpg gene 12034 12411 . - . ID=gene-L8R42_003376;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=L8R42_003376 DAFVNP010000066.1 Protein Homology CDS 12034 12411 . - 0 ID=cds-HBQ7391430.1;Parent=gene-L8R42_003376;Dbxref=NCBI_GP:HBQ7391430.1;Name=HBQ7391430.1;gbkey=CDS;gene=fliO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=L8R42_003376;product=flagellar type III secretion system protein FliO;protein_id=HBQ7391430.1;transl_table=11 DAFVNP010000066.1 tpg gene 12411 12824 . - . ID=gene-L8R42_003377;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=L8R42_003377 DAFVNP010000066.1 Protein Homology CDS 12411 12824 . - 0 ID=cds-HBQ7391431.1;Parent=gene-L8R42_003377;Dbxref=NCBI_GP:HBQ7391431.1;Name=HBQ7391431.1;gbkey=CDS;gene=fliN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=L8R42_003377;product=flagellar motor switch protein FliN;protein_id=HBQ7391431.1;transl_table=11 DAFVNP010000066.1 tpg gene 12821 13825 . - . ID=gene-L8R42_003378;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=L8R42_003378 DAFVNP010000066.1 Protein Homology CDS 12821 13825 . - 0 ID=cds-HBQ7391432.1;Parent=gene-L8R42_003378;Dbxref=NCBI_GP:HBQ7391432.1;Name=HBQ7391432.1;gbkey=CDS;gene=fliM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=L8R42_003378;product=flagellar motor switch protein FliM;protein_id=HBQ7391432.1;transl_table=11 DAFVNP010000066.1 tpg gene 13830 14297 . - . ID=gene-L8R42_003379;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=L8R42_003379 DAFVNP010000066.1 Protein Homology CDS 13830 14297 . - 0 ID=cds-HBQ7391433.1;Parent=gene-L8R42_003379;Dbxref=NCBI_GP:HBQ7391433.1;Name=HBQ7391433.1;gbkey=CDS;gene=fliL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=L8R42_003379;product=flagellar basal body-associated protein FliL;protein_id=HBQ7391433.1;transl_table=11 DAFVNP010000066.1 tpg gene 14402 15625 . - . ID=gene-L8R42_003380;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=L8R42_003380 DAFVNP010000066.1 Protein Homology CDS 14402 15625 . - 0 ID=cds-HBQ7391434.1;Parent=gene-L8R42_003380;Dbxref=NCBI_GP:HBQ7391434.1;Name=HBQ7391434.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=L8R42_003380;product=flagellar hook length control protein FliK;protein_id=HBQ7391434.1;transl_table=11 DAFVNP010000066.1 tpg gene 15622 16065 . - . ID=gene-L8R42_003381;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=L8R42_003381 DAFVNP010000066.1 Protein Homology CDS 15622 16065 . - 0 ID=cds-HBQ7391435.1;Parent=gene-L8R42_003381;Dbxref=NCBI_GP:HBQ7391435.1;Name=HBQ7391435.1;gbkey=CDS;gene=fliJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=L8R42_003381;product=flagella biosynthesis chaperone FliJ;protein_id=HBQ7391435.1;transl_table=11 DAFVNP010000066.1 tpg gene 16087 17457 . - . ID=gene-L8R42_003382;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=L8R42_003382 DAFVNP010000066.1 Protein Homology CDS 16087 17457 . - 0 ID=cds-HBQ7391436.1;Parent=gene-L8R42_003382;Dbxref=NCBI_GP:HBQ7391436.1;Name=HBQ7391436.1;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=L8R42_003382;product=flagellum-specific ATP synthase FliI;protein_id=HBQ7391436.1;transl_table=11 DAFVNP010000066.1 tpg gene 17457 18164 . - . ID=gene-L8R42_003383;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=L8R42_003383 DAFVNP010000066.1 Protein Homology CDS 17457 18164 . - 0 ID=cds-HBQ7391437.1;Parent=gene-L8R42_003383;Dbxref=NCBI_GP:HBQ7391437.1;Name=HBQ7391437.1;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=L8R42_003383;product=flagellar assembly protein FliH;protein_id=HBQ7391437.1;transl_table=11 DAFVNP010000066.1 tpg gene 18157 19152 . - . ID=gene-L8R42_003384;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=L8R42_003384 DAFVNP010000066.1 Protein Homology CDS 18157 19152 . - 0 ID=cds-HBQ7391438.1;Parent=gene-L8R42_003384;Dbxref=NCBI_GP:HBQ7391438.1;Name=HBQ7391438.1;gbkey=CDS;gene=fliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=L8R42_003384;product=flagellar motor switch protein FliG;protein_id=HBQ7391438.1;transl_table=11 DAFVNP010000066.1 tpg gene 19145 20827 . - . ID=gene-L8R42_003385;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=L8R42_003385 DAFVNP010000066.1 Protein Homology CDS 19145 20827 . - 0 ID=cds-HBQ7391439.1;Parent=gene-L8R42_003385;Dbxref=NCBI_GP:HBQ7391439.1;Name=HBQ7391439.1;gbkey=CDS;gene=fliF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=L8R42_003385;product=flagellar M-ring protein FliF;protein_id=HBQ7391439.1;transl_table=11 DAFVNP010000066.1 tpg gene 21044 21358 . + . ID=gene-L8R42_003386;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=L8R42_003386 DAFVNP010000066.1 Protein Homology CDS 21044 21358 . + 0 ID=cds-HBQ7391440.1;Parent=gene-L8R42_003386;Dbxref=NCBI_GP:HBQ7391440.1;Name=HBQ7391440.1;gbkey=CDS;gene=fliE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=L8R42_003386;product=flagellar hook-basal body complex protein FliE;protein_id=HBQ7391440.1;transl_table=11 DAFVNP010000066.1 tpg gene 21478 21864 . - . ID=gene-L8R42_003387;Name=L8R42_003387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003387 DAFVNP010000066.1 Protein Homology CDS 21478 21864 . - 0 ID=cds-HBQ7391441.1;Parent=gene-L8R42_003387;Dbxref=NCBI_GP:HBQ7391441.1;Name=HBQ7391441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=L8R42_003387;product=hypothetical protein;protein_id=HBQ7391441.1;transl_table=11 DAFVNP010000066.1 tpg gene 22129 22362 . - . ID=gene-L8R42_003388;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=L8R42_003388 DAFVNP010000066.1 Protein Homology CDS 22129 22362 . - 0 ID=cds-HBQ7391442.1;Parent=gene-L8R42_003388;Dbxref=NCBI_GP:HBQ7391442.1;Name=HBQ7391442.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=L8R42_003388;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=HBQ7391442.1;transl_table=11 DAFVNP010000066.1 tpg gene 22359 23564 . - . ID=gene-L8R42_003389;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=L8R42_003389 DAFVNP010000066.1 Protein Homology CDS 22359 23564 . - 0 ID=cds-HBQ7391443.1;Parent=gene-L8R42_003389;Dbxref=NCBI_GP:HBQ7391443.1;Name=HBQ7391443.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=L8R42_003389;product=selenium metabolism membrane protein YedE/FdhT;protein_id=HBQ7391443.1;transl_table=11 DAFVNP010000066.1 tpg gene 23750 24163 . + . ID=gene-L8R42_003390;Name=L8R42_003390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003390 DAFVNP010000066.1 Protein Homology CDS 23750 24163 . + 0 ID=cds-HBQ7391444.1;Parent=gene-L8R42_003390;Dbxref=NCBI_GP:HBQ7391444.1;Name=HBQ7391444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460917.1;locus_tag=L8R42_003390;product=lipoprotein;protein_id=HBQ7391444.1;transl_table=11 DAFVNP010000066.1 tpg gene 24203 25687 . - . ID=gene-L8R42_003391;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=L8R42_003391 DAFVNP010000066.1 Protein Homology CDS 24203 25687 . - 0 ID=cds-HBQ7391445.1;Parent=gene-L8R42_003391;Dbxref=NCBI_GP:HBQ7391445.1;Name=HBQ7391445.1;gbkey=CDS;gene=amyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=L8R42_003391;product=alpha-amylase;protein_id=HBQ7391445.1;transl_table=11 DAFVNP010000066.1 tpg gene 25759 26127 . - . ID=gene-L8R42_003392;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=L8R42_003392 DAFVNP010000066.1 Protein Homology CDS 25759 26127 . - 0 ID=cds-HBQ7391446.1;Parent=gene-L8R42_003392;Dbxref=NCBI_GP:HBQ7391446.1;Name=HBQ7391446.1;gbkey=CDS;gene=fliT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=L8R42_003392;product=flagella biosynthesis regulatory protein FliT;protein_id=HBQ7391446.1;transl_table=11 DAFVNP010000066.1 tpg gene 26127 26534 . - . ID=gene-L8R42_003393;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=L8R42_003393 DAFVNP010000066.1 Protein Homology CDS 26127 26534 . - 0 ID=cds-HBQ7391447.1;Parent=gene-L8R42_003393;Dbxref=NCBI_GP:HBQ7391447.1;Name=HBQ7391447.1;gbkey=CDS;gene=fliS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=L8R42_003393;product=flagellar export chaperone FliS;protein_id=HBQ7391447.1;transl_table=11 DAFVNP010000066.1 tpg gene 26549 27952 . - . ID=gene-L8R42_003394;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=L8R42_003394 DAFVNP010000066.1 Protein Homology CDS 26549 27952 . - 0 ID=cds-HBQ7391448.1;Parent=gene-L8R42_003394;Dbxref=NCBI_GP:HBQ7391448.1;Name=HBQ7391448.1;gbkey=CDS;gene=fliD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=L8R42_003394;product=flagellar filament capping protein FliD;protein_id=HBQ7391448.1;transl_table=11 ##sequence-region DAFVNP010000067.1 1 28156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000067.1 tpg region 1 28156 . + . ID=DAFVNP010000067.1:1..28156;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000067.1 tpg gene 534 1205 . + . ID=gene-L8R42_003395;Name=L8R42_003395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003395 DAFVNP010000067.1 Protein Homology CDS 534 1205 . + 0 ID=cds-HBQ7391449.1;Parent=gene-L8R42_003395;Dbxref=NCBI_GP:HBQ7391449.1;Name=HBQ7391449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068748.1;locus_tag=L8R42_003395;product=YjiH family protein;protein_id=HBQ7391449.1;transl_table=11 DAFVNP010000067.1 tpg gene 1202 1663 . + . ID=gene-L8R42_003396;Name=L8R42_003396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003396 DAFVNP010000067.1 Protein Homology CDS 1202 1663 . + 0 ID=cds-HBQ7391450.1;Parent=gene-L8R42_003396;Dbxref=NCBI_GP:HBQ7391450.1;Name=HBQ7391450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=L8R42_003396;product=YjiG family protein;protein_id=HBQ7391450.1;transl_table=11 DAFVNP010000067.1 tpg pseudogene 1676 2847 . + . ID=gene-L8R42_003397;Name=L8R42_003397;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003397;pseudo=true DAFVNP010000067.1 Protein Homology CDS 1676 2847 . + 0 ID=cds-L8R42_003397;Parent=gene-L8R42_003397;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=L8R42_003397;product=beta-aspartyl-peptidase;pseudo=true;transl_table=11 DAFVNP010000067.1 tpg gene 2966 3874 . + . ID=gene-L8R42_003398;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=L8R42_003398 DAFVNP010000067.1 Protein Homology CDS 2966 3874 . + 0 ID=cds-HBQ7391451.1;Parent=gene-L8R42_003398;Dbxref=NCBI_GP:HBQ7391451.1;Name=HBQ7391451.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=L8R42_003398;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=HBQ7391451.1;transl_table=11 DAFVNP010000067.1 tpg gene 3880 4614 . - . ID=gene-L8R42_003399;Name=L8R42_003399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003399 DAFVNP010000067.1 Protein Homology CDS 3880 4614 . - 0 ID=cds-HBQ7391452.1;Parent=gene-L8R42_003399;Dbxref=NCBI_GP:HBQ7391452.1;Name=HBQ7391452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=L8R42_003399;product=aspartate/glutamate racemase family protein;protein_id=HBQ7391452.1;transl_table=11 DAFVNP010000067.1 tpg gene 4853 5383 . - . ID=gene-L8R42_003400;Name=L8R42_003400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003400 DAFVNP010000067.1 Protein Homology CDS 4853 5383 . - 0 ID=cds-HBQ7391453.1;Parent=gene-L8R42_003400;Dbxref=NCBI_GP:HBQ7391453.1;Name=HBQ7391453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=L8R42_003400;product=type VI secretion system tube protein Hcp;protein_id=HBQ7391453.1;transl_table=11 DAFVNP010000067.1 tpg gene 6101 7114 . + . ID=gene-L8R42_003401;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=L8R42_003401 DAFVNP010000067.1 Protein Homology CDS 6101 7114 . + 0 ID=cds-HBQ7391454.1;Parent=gene-L8R42_003401;Dbxref=NCBI_GP:HBQ7391454.1;Name=HBQ7391454.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=L8R42_003401;product=tryptophan--tRNA ligase;protein_id=HBQ7391454.1;transl_table=11 DAFVNP010000067.1 tpg gene 7115 7888 . - . ID=gene-L8R42_003402;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=L8R42_003402 DAFVNP010000067.1 Protein Homology CDS 7115 7888 . - 0 ID=cds-HBQ7391455.1;Parent=gene-L8R42_003402;Dbxref=NCBI_GP:HBQ7391455.1;Name=HBQ7391455.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=L8R42_003402;product=Uxu operon transcriptional regulator;protein_id=HBQ7391455.1;transl_table=11 DAFVNP010000067.1 tpg gene 8238 8912 . + . ID=gene-L8R42_003403;Name=L8R42_003403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003403 DAFVNP010000067.1 Protein Homology CDS 8238 8912 . + 0 ID=cds-HBQ7391456.1;Parent=gene-L8R42_003403;Dbxref=NCBI_GP:HBQ7391456.1;Name=HBQ7391456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=L8R42_003403;product=dienelactone hydrolase family protein;protein_id=HBQ7391456.1;transl_table=11 DAFVNP010000067.1 tpg gene 8909 9370 . - . ID=gene-L8R42_003404;Name=L8R42_003404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003404 DAFVNP010000067.1 Protein Homology CDS 8909 9370 . - 0 ID=cds-HBQ7391457.1;Parent=gene-L8R42_003404;Dbxref=NCBI_GP:HBQ7391457.1;Name=HBQ7391457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=L8R42_003404;product=DUF302 domain-containing protein;protein_id=HBQ7391457.1;transl_table=11 DAFVNP010000067.1 tpg gene 9575 10486 . - . ID=gene-L8R42_003405;Name=L8R42_003405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003405 DAFVNP010000067.1 Protein Homology CDS 9575 10486 . - 0 ID=cds-HBQ7391458.1;Parent=gene-L8R42_003405;Dbxref=NCBI_GP:HBQ7391458.1;Name=HBQ7391458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=L8R42_003405;product=hypothetical protein;protein_id=HBQ7391458.1;transl_table=11 DAFVNP010000067.1 tpg gene 10838 11446 . - . ID=gene-L8R42_003406;Name=L8R42_003406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003406 DAFVNP010000067.1 Protein Homology CDS 10838 11446 . - 0 ID=cds-HBQ7391459.1;Parent=gene-L8R42_003406;Dbxref=NCBI_GP:HBQ7391459.1;Name=HBQ7391459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=L8R42_003406;product=DUF1062 domain-containing protein;protein_id=HBQ7391459.1;transl_table=11 DAFVNP010000067.1 tpg gene 11934 12191 . + . ID=gene-L8R42_003407;Name=L8R42_003407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003407 DAFVNP010000067.1 Protein Homology CDS 11934 12191 . + 0 ID=cds-HBQ7391460.1;Parent=gene-L8R42_003407;Dbxref=NCBI_GP:HBQ7391460.1;Name=HBQ7391460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=L8R42_003407;product=YjhX family toxin;protein_id=HBQ7391460.1;transl_table=11 DAFVNP010000067.1 tpg gene 12196 13827 . + . ID=gene-L8R42_003408;Name=L8R42_003408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003408 DAFVNP010000067.1 Protein Homology CDS 12196 13827 . + 0 ID=cds-HBQ7391461.1;Parent=gene-L8R42_003408;Dbxref=NCBI_GP:HBQ7391461.1;Name=HBQ7391461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=L8R42_003408;product=SAM-dependent methyltransferase;protein_id=HBQ7391461.1;transl_table=11 DAFVNP010000067.1 tpg gene 14387 15103 . + . ID=gene-L8R42_003409;Name=L8R42_003409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003409 DAFVNP010000067.1 Protein Homology CDS 14387 15103 . + 0 ID=cds-HBQ7391462.1;Parent=gene-L8R42_003409;Dbxref=NCBI_GP:HBQ7391462.1;Name=HBQ7391462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=L8R42_003409;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=HBQ7391462.1;transl_table=11 DAFVNP010000067.1 tpg pseudogene 15583 16383 . - . ID=gene-L8R42_003410;Name=L8R42_003410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003410;pseudo=true DAFVNP010000067.1 Protein Homology CDS 15583 16383 . - 0 ID=cds-L8R42_003410;Parent=gene-L8R42_003410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=L8R42_003410;product=HNH endonuclease;pseudo=true;transl_table=11 DAFVNP010000067.1 tpg gene 16400 16939 . + . ID=gene-L8R42_003411;Name=L8R42_003411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003411 DAFVNP010000067.1 Protein Homology CDS 16400 16939 . + 0 ID=cds-HBQ7391463.1;Parent=gene-L8R42_003411;Dbxref=NCBI_GP:HBQ7391463.1;Name=HBQ7391463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665530.1;locus_tag=L8R42_003411;product=malate transporter;protein_id=HBQ7391463.1;transl_table=11 DAFVNP010000067.1 tpg gene 17778 18179 . - . ID=gene-L8R42_003412;Name=L8R42_003412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003412 DAFVNP010000067.1 GeneMarkS-2+ CDS 17778 18179 . - 0 ID=cds-HBQ7391464.1;Parent=gene-L8R42_003412;Dbxref=NCBI_GP:HBQ7391464.1;Name=HBQ7391464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_003412;product=hypothetical protein;protein_id=HBQ7391464.1;transl_table=11 DAFVNP010000067.1 tpg gene 18395 19012 . + . ID=gene-L8R42_003413;Name=L8R42_003413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003413 DAFVNP010000067.1 Protein Homology CDS 18395 19012 . + 0 ID=cds-HBQ7391465.1;Parent=gene-L8R42_003413;Dbxref=NCBI_GP:HBQ7391465.1;Name=HBQ7391465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552306.1;locus_tag=L8R42_003413;product=DUF1819 family protein;protein_id=HBQ7391465.1;transl_table=11 DAFVNP010000067.1 tpg gene 19009 19611 . + . ID=gene-L8R42_003414;Name=L8R42_003414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003414 DAFVNP010000067.1 Protein Homology CDS 19009 19611 . + 0 ID=cds-HBQ7391466.1;Parent=gene-L8R42_003414;Dbxref=NCBI_GP:HBQ7391466.1;Name=HBQ7391466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005974436.1;locus_tag=L8R42_003414;product=DUF1788 domain-containing protein;protein_id=HBQ7391466.1;transl_table=11 DAFVNP010000067.1 tpg gene 19624 23238 . + . ID=gene-L8R42_003415;Name=brxC;gbkey=Gene;gene=brxC;gene_biotype=protein_coding;locus_tag=L8R42_003415 DAFVNP010000067.1 Protein Homology CDS 19624 23238 . + 0 ID=cds-HBQ7391467.1;Parent=gene-L8R42_003415;Dbxref=NCBI_GP:HBQ7391467.1;Name=HBQ7391467.1;gbkey=CDS;gene=brxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001019650.1;locus_tag=L8R42_003415;product=BREX system P-loop protein BrxC;protein_id=HBQ7391467.1;transl_table=11 DAFVNP010000067.1 tpg gene 23287 26943 . + . ID=gene-L8R42_003416;Name=pglX;gbkey=Gene;gene=pglX;gene_biotype=protein_coding;locus_tag=L8R42_003416 DAFVNP010000067.1 Protein Homology CDS 23287 26943 . + 0 ID=cds-HBQ7391468.1;Parent=gene-L8R42_003416;Dbxref=NCBI_GP:HBQ7391468.1;Name=HBQ7391468.1;gbkey=CDS;gene=pglX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098045.1;locus_tag=L8R42_003416;product=BREX-1 system adenine-specific DNA-methyltransferase PglX;protein_id=HBQ7391468.1;transl_table=11 DAFVNP010000067.1 tpg gene 26943 28064 . + . ID=gene-L8R42_003417;Name=L8R42_003417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003417 DAFVNP010000067.1 Protein Homology CDS 26943 28064 . + 0 ID=cds-HBQ7391469.1;Parent=gene-L8R42_003417;Dbxref=NCBI_GP:HBQ7391469.1;Name=HBQ7391469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000371966.1;locus_tag=L8R42_003417;product=AAA family ATPase;protein_id=HBQ7391469.1;transl_table=11 ##sequence-region DAFVNP010000068.1 1 27285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000068.1 tpg region 1 27285 . + . ID=DAFVNP010000068.1:1..27285;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000068.1 tpg gene 89 778 . - . ID=gene-L8R42_003418;Name=L8R42_003418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003418 DAFVNP010000068.1 Protein Homology CDS 89 778 . - 0 ID=cds-HBQ7391470.1;Parent=gene-L8R42_003418;Dbxref=NCBI_GP:HBQ7391470.1;Name=HBQ7391470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=L8R42_003418;product=sel1 repeat family protein;protein_id=HBQ7391470.1;transl_table=11 DAFVNP010000068.1 tpg gene 955 3102 . - . ID=gene-L8R42_003419;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=L8R42_003419 DAFVNP010000068.1 Protein Homology CDS 955 3102 . - 0 ID=cds-HBQ7391471.1;Parent=gene-L8R42_003419;Dbxref=NCBI_GP:HBQ7391471.1;Name=HBQ7391471.1;gbkey=CDS;gene=fdhF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=L8R42_003419;product=formate dehydrogenase subunit alpha;protein_id=HBQ7391471.1;transl_except=(pos:complement(2683..2685)%2Caa:Sec);transl_table=11 DAFVNP010000068.1 tpg gene 3457 4365 . - . ID=gene-L8R42_003420;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=L8R42_003420 DAFVNP010000068.1 Protein Homology CDS 3457 4365 . - 0 ID=cds-HBQ7391472.1;Parent=gene-L8R42_003420;Dbxref=NCBI_GP:HBQ7391472.1;Name=HBQ7391472.1;gbkey=CDS;gene=lpxO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=L8R42_003420;product=lipid A hydroxylase LpxO;protein_id=HBQ7391472.1;transl_table=11 DAFVNP010000068.1 tpg gene 4623 5057 . - . ID=gene-L8R42_003421;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=L8R42_003421 DAFVNP010000068.1 Protein Homology CDS 4623 5057 . - 0 ID=cds-HBQ7391473.1;Parent=gene-L8R42_003421;Dbxref=NCBI_GP:HBQ7391473.1;Name=HBQ7391473.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=L8R42_003421;product=aminoalkylphosphonate N-acetyltransferase;protein_id=HBQ7391473.1;transl_table=11 DAFVNP010000068.1 tpg gene 5209 5652 . - . ID=gene-L8R42_003422;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=L8R42_003422 DAFVNP010000068.1 Protein Homology CDS 5209 5652 . - 0 ID=cds-HBQ7391474.1;Parent=gene-L8R42_003422;Dbxref=NCBI_GP:HBQ7391474.1;Name=HBQ7391474.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=L8R42_003422;product=VOC family metalloprotein YjdN;protein_id=HBQ7391474.1;transl_table=11 DAFVNP010000068.1 tpg gene 5772 6107 . - . ID=gene-L8R42_003423;Name=L8R42_003423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003423 DAFVNP010000068.1 Protein Homology CDS 5772 6107 . - 0 ID=cds-HBQ7391475.1;Parent=gene-L8R42_003423;Dbxref=NCBI_GP:HBQ7391475.1;Name=HBQ7391475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=L8R42_003423;product=phnA family protein;protein_id=HBQ7391475.1;transl_table=11 DAFVNP010000068.1 tpg gene 6575 8077 . + . ID=gene-L8R42_003424;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=L8R42_003424 DAFVNP010000068.1 Protein Homology CDS 6575 8077 . + 0 ID=cds-HBQ7391476.1;Parent=gene-L8R42_003424;Dbxref=NCBI_GP:HBQ7391476.1;Name=HBQ7391476.1;gbkey=CDS;gene=proP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=L8R42_003424;product=glycine betaine/L-proline transporter ProP;protein_id=HBQ7391476.1;transl_table=11 DAFVNP010000068.1 tpg gene 8147 8236 . + . ID=gene-L8R42_003425;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=L8R42_003425 DAFVNP010000068.1 Protein Homology CDS 8147 8236 . + 0 ID=cds-HBQ7391477.1;Parent=gene-L8R42_003425;Dbxref=NCBI_GP:HBQ7391477.1;Name=HBQ7391477.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=L8R42_003425;product=LpxT activity modulator PmrR;protein_id=HBQ7391477.1;transl_table=11 DAFVNP010000068.1 tpg gene 8244 9314 . - . ID=gene-L8R42_003426;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=L8R42_003426 DAFVNP010000068.1 Protein Homology CDS 8244 9314 . - 0 ID=cds-HBQ7391478.1;Parent=gene-L8R42_003426;Dbxref=NCBI_GP:HBQ7391478.1;Name=HBQ7391478.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=L8R42_003426;product=two-component system sensor histidine kinase PmrB;protein_id=HBQ7391478.1;transl_table=11 DAFVNP010000068.1 tpg gene 9324 9992 . - . ID=gene-L8R42_003427;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=L8R42_003427 DAFVNP010000068.1 Protein Homology CDS 9324 9992 . - 0 ID=cds-HBQ7391479.1;Parent=gene-L8R42_003427;Dbxref=NCBI_GP:HBQ7391479.1;Name=HBQ7391479.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=L8R42_003427;product=two-component system response regulator PmrA;protein_id=HBQ7391479.1;transl_table=11 DAFVNP010000068.1 tpg gene 9989 11632 . - . ID=gene-L8R42_003428;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=L8R42_003428 DAFVNP010000068.1 Protein Homology CDS 9989 11632 . - 0 ID=cds-HBQ7391480.1;Parent=gene-L8R42_003428;Dbxref=NCBI_GP:HBQ7391480.1;Name=HBQ7391480.1;gbkey=CDS;gene=eptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=L8R42_003428;product=phosphoethanolamine transferase EptA;protein_id=HBQ7391480.1;transl_table=11 DAFVNP010000068.1 tpg gene 11766 13103 . - . ID=gene-L8R42_003429;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=L8R42_003429 DAFVNP010000068.1 Protein Homology CDS 11766 13103 . - 0 ID=cds-HBQ7391481.1;Parent=gene-L8R42_003429;Dbxref=NCBI_GP:HBQ7391481.1;Name=HBQ7391481.1;gbkey=CDS;gene=adiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=L8R42_003429;product=arginine/agmatine antiporter;protein_id=HBQ7391481.1;transl_table=11 DAFVNP010000068.1 tpg gene 13243 14004 . - . ID=gene-L8R42_003430;Name=L8R42_003430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003430 DAFVNP010000068.1 Protein Homology CDS 13243 14004 . - 0 ID=cds-HBQ7391482.1;Parent=gene-L8R42_003430;Dbxref=NCBI_GP:HBQ7391482.1;Name=HBQ7391482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=L8R42_003430;product=AraC family transcriptional regulator;protein_id=HBQ7391482.1;transl_table=11 DAFVNP010000068.1 tpg gene 14302 16569 . - . ID=gene-L8R42_003431;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=L8R42_003431 DAFVNP010000068.1 Protein Homology CDS 14302 16569 . - 0 ID=cds-HBQ7391483.1;Parent=gene-L8R42_003431;Dbxref=NCBI_GP:HBQ7391483.1;Name=HBQ7391483.1;gbkey=CDS;gene=adiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=L8R42_003431;product=arginine decarboxylase;protein_id=HBQ7391483.1;transl_table=11 DAFVNP010000068.1 tpg gene 16802 17734 . - . ID=gene-L8R42_003432;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=L8R42_003432 DAFVNP010000068.1 Protein Homology CDS 16802 17734 . - 0 ID=cds-HBQ7391484.1;Parent=gene-L8R42_003432;Dbxref=NCBI_GP:HBQ7391484.1;Name=HBQ7391484.1;gbkey=CDS;gene=melR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=L8R42_003432;product=transcriptional regulator MelR;protein_id=HBQ7391484.1;transl_table=11 DAFVNP010000068.1 tpg gene 18003 19358 . + . ID=gene-L8R42_003433;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=L8R42_003433 DAFVNP010000068.1 Protein Homology CDS 18003 19358 . + 0 ID=cds-HBQ7391485.1;Parent=gene-L8R42_003433;Dbxref=NCBI_GP:HBQ7391485.1;Name=HBQ7391485.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=L8R42_003433;product=alpha-galactosidase;protein_id=HBQ7391485.1;transl_table=11 DAFVNP010000068.1 tpg gene 19442 20872 . + . ID=gene-L8R42_003434;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=L8R42_003434 DAFVNP010000068.1 Protein Homology CDS 19442 20872 . + 0 ID=cds-HBQ7391486.1;Parent=gene-L8R42_003434;Dbxref=NCBI_GP:HBQ7391486.1;Name=HBQ7391486.1;gbkey=CDS;gene=melB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=L8R42_003434;product=melibiose:sodium transporter MelB;protein_id=HBQ7391486.1;transl_table=11 DAFVNP010000068.1 tpg gene 20961 22607 . - . ID=gene-L8R42_003435;Name=L8R42_003435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003435 DAFVNP010000068.1 Protein Homology CDS 20961 22607 . - 0 ID=cds-HBQ7391487.1;Parent=gene-L8R42_003435;Dbxref=NCBI_GP:HBQ7391487.1;Name=HBQ7391487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=L8R42_003435;product=fumarate hydratase;protein_id=HBQ7391487.1;transl_table=11 DAFVNP010000068.1 tpg gene 22703 24043 . - . ID=gene-L8R42_003436;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=L8R42_003436 DAFVNP010000068.1 Protein Homology CDS 22703 24043 . - 0 ID=cds-HBQ7391488.1;Parent=gene-L8R42_003436;Dbxref=NCBI_GP:HBQ7391488.1;Name=HBQ7391488.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=L8R42_003436;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=HBQ7391488.1;transl_table=11 DAFVNP010000068.1 tpg gene 24190 24456 . - . ID=gene-L8R42_003437;Name=L8R42_003437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003437 DAFVNP010000068.1 Protein Homology CDS 24190 24456 . - 0 ID=cds-HBQ7391489.1;Parent=gene-L8R42_003437;Dbxref=NCBI_GP:HBQ7391489.1;Name=HBQ7391489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=L8R42_003437;product=hypothetical protein;protein_id=HBQ7391489.1;transl_table=11 DAFVNP010000068.1 tpg gene 24773 25492 . - . ID=gene-L8R42_003438;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=L8R42_003438 DAFVNP010000068.1 Protein Homology CDS 24773 25492 . - 0 ID=cds-HBQ7391490.1;Parent=gene-L8R42_003438;Dbxref=NCBI_GP:HBQ7391490.1;Name=HBQ7391490.1;gbkey=CDS;gene=dcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=L8R42_003438;product=two-component system response regulator DcuR;protein_id=HBQ7391490.1;transl_table=11 DAFVNP010000068.1 tpg gene 25489 27120 . - . ID=gene-L8R42_003439;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=L8R42_003439 DAFVNP010000068.1 Protein Homology CDS 25489 27120 . - 0 ID=cds-HBQ7391491.1;Parent=gene-L8R42_003439;Dbxref=NCBI_GP:HBQ7391491.1;Name=HBQ7391491.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=L8R42_003439;product=two-component system sensor histidine kinase DcuS;protein_id=HBQ7391491.1;transl_table=11 ##sequence-region DAFVNP010000069.1 1 27225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000069.1 tpg region 1 27225 . + . ID=DAFVNP010000069.1:1..27225;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000069.1 tpg gene 1 278 . + . ID=gene-L8R42_003440;Name=L8R42_003440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003440;partial=true;start_range=.,1 DAFVNP010000069.1 Protein Homology CDS 1 278 . + 2 ID=cds-HBQ7391492.1;Parent=gene-L8R42_003440;Dbxref=NCBI_GP:HBQ7391492.1;Name=HBQ7391492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=L8R42_003440;partial=true;product=GtrA family protein;protein_id=HBQ7391492.1;start_range=.,1;transl_table=11 DAFVNP010000069.1 tpg gene 275 1204 . + . ID=gene-L8R42_003441;Name=L8R42_003441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003441 DAFVNP010000069.1 Protein Homology CDS 275 1204 . + 0 ID=cds-HBQ7391493.1;Parent=gene-L8R42_003441;Dbxref=NCBI_GP:HBQ7391493.1;Name=HBQ7391493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=L8R42_003441;product=glycosyltransferase family 2 protein;protein_id=HBQ7391493.1;transl_table=11 DAFVNP010000069.1 tpg gene 1215 2762 . + . ID=gene-L8R42_003442;Name=L8R42_003442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003442 DAFVNP010000069.1 Protein Homology CDS 1215 2762 . + 0 ID=cds-HBQ7391494.1;Parent=gene-L8R42_003442;Dbxref=NCBI_GP:HBQ7391494.1;Name=HBQ7391494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=L8R42_003442;product=hypothetical protein;protein_id=HBQ7391494.1;transl_table=11 DAFVNP010000069.1 tpg gene 2926 3285 . + . ID=gene-L8R42_003443;Name=L8R42_003443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003443 DAFVNP010000069.1 Protein Homology CDS 2926 3285 . + 0 ID=cds-HBQ7391495.1;Parent=gene-L8R42_003443;Dbxref=NCBI_GP:HBQ7391495.1;Name=HBQ7391495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=L8R42_003443;product=GPW/gp25 family protein;protein_id=HBQ7391495.1;transl_table=11 DAFVNP010000069.1 tpg gene 3276 4391 . + . ID=gene-L8R42_003444;Name=L8R42_003444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003444 DAFVNP010000069.1 Protein Homology CDS 3276 4391 . + 0 ID=cds-HBQ7391496.1;Parent=gene-L8R42_003444;Dbxref=NCBI_GP:HBQ7391496.1;Name=HBQ7391496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=L8R42_003444;product=baseplate J/gp47 family protein;protein_id=HBQ7391496.1;transl_table=11 DAFVNP010000069.1 tpg gene 4384 5016 . + . ID=gene-L8R42_003445;Name=L8R42_003445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003445 DAFVNP010000069.1 Protein Homology CDS 4384 5016 . + 0 ID=cds-HBQ7391497.1;Parent=gene-L8R42_003445;Dbxref=NCBI_GP:HBQ7391497.1;Name=HBQ7391497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=L8R42_003445;product=phage tail protein I;protein_id=HBQ7391497.1;transl_table=11 DAFVNP010000069.1 tpg gene 5019 6788 . + . ID=gene-L8R42_003446;Name=L8R42_003446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003446 DAFVNP010000069.1 Protein Homology CDS 5019 6788 . + 0 ID=cds-HBQ7391498.1;Parent=gene-L8R42_003446;Dbxref=NCBI_GP:HBQ7391498.1;Name=HBQ7391498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463065.1;locus_tag=L8R42_003446;product=tail fiber protein;protein_id=HBQ7391498.1;transl_table=11 DAFVNP010000069.1 tpg gene 6793 7398 . + . ID=gene-L8R42_003447;Name=L8R42_003447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003447 DAFVNP010000069.1 Protein Homology CDS 6793 7398 . + 0 ID=cds-HBQ7391499.1;Parent=gene-L8R42_003447;Dbxref=NCBI_GP:HBQ7391499.1;Name=HBQ7391499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463064.1;locus_tag=L8R42_003447;product=DUF4376 domain-containing protein;protein_id=HBQ7391499.1;transl_table=11 DAFVNP010000069.1 tpg gene 7395 7850 . + . ID=gene-L8R42_003448;Name=L8R42_003448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003448 DAFVNP010000069.1 Protein Homology CDS 7395 7850 . + 0 ID=cds-HBQ7391500.1;Parent=gene-L8R42_003448;Dbxref=NCBI_GP:HBQ7391500.1;Name=HBQ7391500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=L8R42_003448;product=hypothetical protein;protein_id=HBQ7391500.1;transl_table=11 DAFVNP010000069.1 tpg pseudogene 8099 8388 . + . ID=gene-L8R42_003449;Name=L8R42_003449;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003449;pseudo=true DAFVNP010000069.1 Protein Homology CDS 8099 8388 . + 0 ID=cds-L8R42_003449;Parent=gene-L8R42_003449;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=L8R42_003449;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000069.1 tpg gene 8585 9313 . + . ID=gene-L8R42_003450;Name=L8R42_003450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003450 DAFVNP010000069.1 Protein Homology CDS 8585 9313 . + 0 ID=cds-HBQ7391501.1;Parent=gene-L8R42_003450;Dbxref=NCBI_GP:HBQ7391501.1;Name=HBQ7391501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=L8R42_003450;product=hypothetical protein;protein_id=HBQ7391501.1;transl_table=11 DAFVNP010000069.1 tpg gene 9575 10516 . + . ID=gene-L8R42_003451;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=L8R42_003451 DAFVNP010000069.1 Protein Homology CDS 9575 10516 . + 0 ID=cds-HBQ7391502.1;Parent=gene-L8R42_003451;Dbxref=NCBI_GP:HBQ7391502.1;Name=HBQ7391502.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=L8R42_003451;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=HBQ7391502.1;transl_table=11 DAFVNP010000069.1 tpg gene 10614 10886 . + . ID=gene-L8R42_003452;Name=L8R42_003452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003452 DAFVNP010000069.1 Protein Homology CDS 10614 10886 . + 0 ID=cds-HBQ7391503.1;Parent=gene-L8R42_003452;Dbxref=NCBI_GP:HBQ7391503.1;Name=HBQ7391503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=L8R42_003452;product=DUF3811 domain-containing protein;protein_id=HBQ7391503.1;transl_table=11 DAFVNP010000069.1 tpg gene 10883 11752 . - . ID=gene-L8R42_003453;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=L8R42_003453 DAFVNP010000069.1 Protein Homology CDS 10883 11752 . - 0 ID=cds-HBQ7391504.1;Parent=gene-L8R42_003453;Dbxref=NCBI_GP:HBQ7391504.1;Name=HBQ7391504.1;gbkey=CDS;gene=rluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=L8R42_003453;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=HBQ7391504.1;transl_table=11 DAFVNP010000069.1 tpg gene 11799 12338 . - . ID=gene-L8R42_003454;Name=L8R42_003454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003454 DAFVNP010000069.1 Protein Homology CDS 11799 12338 . - 0 ID=cds-HBQ7391505.1;Parent=gene-L8R42_003454;Dbxref=NCBI_GP:HBQ7391505.1;Name=HBQ7391505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=L8R42_003454;product=DUF2058 domain-containing protein;protein_id=HBQ7391505.1;transl_table=11 DAFVNP010000069.1 tpg gene 12373 12474 . - . ID=gene-L8R42_003455;Name=L8R42_003455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003455 DAFVNP010000069.1 Protein Homology CDS 12373 12474 . - 0 ID=cds-HBQ7391506.1;Parent=gene-L8R42_003455;Dbxref=NCBI_GP:HBQ7391506.1;Name=HBQ7391506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=L8R42_003455;product=hypothetical protein;protein_id=HBQ7391506.1;transl_table=11 DAFVNP010000069.1 tpg gene 12546 13235 . + . ID=gene-L8R42_003456;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=L8R42_003456 DAFVNP010000069.1 Protein Homology CDS 12546 13235 . + 0 ID=cds-HBQ7391507.1;Parent=gene-L8R42_003456;Dbxref=NCBI_GP:HBQ7391507.1;Name=HBQ7391507.1;gbkey=CDS;gene=pepE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=L8R42_003456;product=dipeptidase PepE;protein_id=HBQ7391507.1;transl_table=11 DAFVNP010000069.1 tpg gene 13311 14942 . - . ID=gene-L8R42_003457;Name=L8R42_003457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003457 DAFVNP010000069.1 Protein Homology CDS 13311 14942 . - 0 ID=cds-HBQ7391508.1;Parent=gene-L8R42_003457;Dbxref=NCBI_GP:HBQ7391508.1;Name=HBQ7391508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=L8R42_003457;product=Na/Pi cotransporter family protein;protein_id=HBQ7391508.1;transl_table=11 DAFVNP010000069.1 tpg gene 15209 18892 . - . ID=gene-L8R42_003458;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=L8R42_003458 DAFVNP010000069.1 Protein Homology CDS 15209 18892 . - 0 ID=cds-HBQ7391509.1;Parent=gene-L8R42_003458;Dbxref=NCBI_GP:HBQ7391509.1;Name=HBQ7391509.1;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=L8R42_003458;product=methionine synthase;protein_id=HBQ7391509.1;transl_table=11 DAFVNP010000069.1 tpg gene 19197 20021 . + . ID=gene-L8R42_003459;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=L8R42_003459 DAFVNP010000069.1 Protein Homology CDS 19197 20021 . + 0 ID=cds-HBQ7391510.1;Parent=gene-L8R42_003459;Dbxref=NCBI_GP:HBQ7391510.1;Name=HBQ7391510.1;gbkey=CDS;gene=iclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=L8R42_003459;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=HBQ7391510.1;transl_table=11 DAFVNP010000069.1 tpg gene 20032 20439 . + . ID=gene-L8R42_003460;Name=L8R42_003460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003460 DAFVNP010000069.1 Protein Homology CDS 20032 20439 . + 0 ID=cds-HBQ7391511.1;Parent=gene-L8R42_003460;Dbxref=NCBI_GP:HBQ7391511.1;Name=HBQ7391511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=L8R42_003460;product=ASCH domain-containing protein;protein_id=HBQ7391511.1;transl_table=11 DAFVNP010000069.1 tpg gene 20403 22154 . - . ID=gene-L8R42_003461;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=L8R42_003461 DAFVNP010000069.1 Protein Homology CDS 20403 22154 . - 0 ID=cds-HBQ7391512.1;Parent=gene-L8R42_003461;Dbxref=NCBI_GP:HBQ7391512.1;Name=HBQ7391512.1;gbkey=CDS;gene=aceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=L8R42_003461;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=HBQ7391512.1;transl_table=11 DAFVNP010000069.1 tpg gene 22256 23560 . - . ID=gene-L8R42_003462;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=L8R42_003462 DAFVNP010000069.1 Protein Homology CDS 22256 23560 . - 0 ID=cds-HBQ7391513.1;Parent=gene-L8R42_003462;Dbxref=NCBI_GP:HBQ7391513.1;Name=HBQ7391513.1;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=L8R42_003462;product=isocitrate lyase;protein_id=HBQ7391513.1;transl_table=11 DAFVNP010000069.1 tpg gene 23592 25193 . - . ID=gene-L8R42_003463;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=L8R42_003463 DAFVNP010000069.1 Protein Homology CDS 23592 25193 . - 0 ID=cds-HBQ7391514.1;Parent=gene-L8R42_003463;Dbxref=NCBI_GP:HBQ7391514.1;Name=HBQ7391514.1;gbkey=CDS;gene=aceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=L8R42_003463;product=malate synthase A;protein_id=HBQ7391514.1;transl_table=11 DAFVNP010000069.1 tpg gene 25462 26391 . - . ID=gene-L8R42_003464;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=L8R42_003464 DAFVNP010000069.1 Protein Homology CDS 25462 26391 . - 0 ID=cds-HBQ7391515.1;Parent=gene-L8R42_003464;Dbxref=NCBI_GP:HBQ7391515.1;Name=HBQ7391515.1;gbkey=CDS;gene=metA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=L8R42_003464;product=homoserine O-succinyltransferase;protein_id=HBQ7391515.1;transl_table=11 DAFVNP010000069.1 tpg gene 26548 26985 . + . ID=gene-L8R42_003465;Name=L8R42_003465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003465 DAFVNP010000069.1 Protein Homology CDS 26548 26985 . + 0 ID=cds-HBQ7391516.1;Parent=gene-L8R42_003465;Dbxref=NCBI_GP:HBQ7391516.1;Name=HBQ7391516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=L8R42_003465;product=acetyltransferase;protein_id=HBQ7391516.1;transl_table=11 ##sequence-region DAFVNP010000070.1 1 25181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000070.1 tpg region 1 25181 . + . ID=DAFVNP010000070.1:1..25181;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000070.1 tpg gene 161 2590 . + . ID=gene-L8R42_003466;Name=L8R42_003466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003466 DAFVNP010000070.1 Protein Homology CDS 161 2590 . + 0 ID=cds-HBQ7391517.1;Parent=gene-L8R42_003466;Dbxref=NCBI_GP:HBQ7391517.1;Name=HBQ7391517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805283.1;locus_tag=L8R42_003466;product=molybdopterin-dependent oxidoreductase;protein_id=HBQ7391517.1;transl_table=11 DAFVNP010000070.1 tpg gene 2601 3218 . + . ID=gene-L8R42_003467;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=L8R42_003467 DAFVNP010000070.1 Protein Homology CDS 2601 3218 . + 0 ID=cds-HBQ7391518.1;Parent=gene-L8R42_003467;Dbxref=NCBI_GP:HBQ7391518.1;Name=HBQ7391518.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=L8R42_003467;product=dimethylsulfoxide reductase subunit B;protein_id=HBQ7391518.1;transl_table=11 DAFVNP010000070.1 tpg gene 3220 4077 . + . ID=gene-L8R42_003468;Name=L8R42_003468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003468 DAFVNP010000070.1 Protein Homology CDS 3220 4077 . + 0 ID=cds-HBQ7391519.1;Parent=gene-L8R42_003468;Dbxref=NCBI_GP:HBQ7391519.1;Name=HBQ7391519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=L8R42_003468;product=dimethyl sulfoxide reductase anchor subunit;protein_id=HBQ7391519.1;transl_table=11 DAFVNP010000070.1 tpg gene 4119 4733 . + . ID=gene-L8R42_003469;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=L8R42_003469 DAFVNP010000070.1 Protein Homology CDS 4119 4733 . + 0 ID=cds-HBQ7391520.1;Parent=gene-L8R42_003469;Dbxref=NCBI_GP:HBQ7391520.1;Name=HBQ7391520.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129294.1;locus_tag=L8R42_003469;product=Tat proofreading chaperone DmsD;protein_id=HBQ7391520.1;transl_table=11 DAFVNP010000070.1 tpg gene 4972 5253 . + . ID=gene-L8R42_003470;Name=L8R42_003470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003470 DAFVNP010000070.1 Protein Homology CDS 4972 5253 . + 0 ID=cds-HBQ7391521.1;Parent=gene-L8R42_003470;Dbxref=NCBI_GP:HBQ7391521.1;Name=HBQ7391521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706353.1;locus_tag=L8R42_003470;product=hypothetical protein;protein_id=HBQ7391521.1;transl_table=11 DAFVNP010000070.1 tpg gene 5288 5632 . + . ID=gene-L8R42_003471;Name=L8R42_003471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003471 DAFVNP010000070.1 Protein Homology CDS 5288 5632 . + 0 ID=cds-HBQ7391522.1;Parent=gene-L8R42_003471;Dbxref=NCBI_GP:HBQ7391522.1;Name=HBQ7391522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712977.1;locus_tag=L8R42_003471;product=carboxymuconolactone decarboxylase family protein;protein_id=HBQ7391522.1;transl_table=11 DAFVNP010000070.1 tpg gene 5852 7465 . - . ID=gene-L8R42_003472;Name=L8R42_003472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003472 DAFVNP010000070.1 Protein Homology CDS 5852 7465 . - 0 ID=cds-HBQ7391523.1;Parent=gene-L8R42_003472;Dbxref=NCBI_GP:HBQ7391523.1;Name=HBQ7391523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=L8R42_003472;product=peptide ABC transporter substrate-binding protein;protein_id=HBQ7391523.1;transl_table=11 DAFVNP010000070.1 tpg gene 7655 8383 . + . ID=gene-L8R42_003473;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=L8R42_003473 DAFVNP010000070.1 Protein Homology CDS 7655 8383 . + 0 ID=cds-HBQ7391524.1;Parent=gene-L8R42_003473;Dbxref=NCBI_GP:HBQ7391524.1;Name=HBQ7391524.1;gbkey=CDS;gene=mpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=L8R42_003473;product=murein tripeptide amidase MpaA;protein_id=HBQ7391524.1;transl_table=11 DAFVNP010000070.1 tpg gene 8358 9323 . - . ID=gene-L8R42_003474;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=L8R42_003474 DAFVNP010000070.1 Protein Homology CDS 8358 9323 . - 0 ID=cds-HBQ7391525.1;Parent=gene-L8R42_003474;Dbxref=NCBI_GP:HBQ7391525.1;Name=HBQ7391525.1;gbkey=CDS;gene=ycjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=L8R42_003474;product=L-Ala-D/L-Glu epimerase;protein_id=HBQ7391525.1;transl_table=11 DAFVNP010000070.1 tpg gene 9439 9945 . + . ID=gene-L8R42_003475;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=L8R42_003475 DAFVNP010000070.1 Protein Homology CDS 9439 9945 . + 0 ID=cds-HBQ7391526.1;Parent=gene-L8R42_003475;Dbxref=NCBI_GP:HBQ7391526.1;Name=HBQ7391526.1;gbkey=CDS;gene=tpx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=L8R42_003475;product=thiol peroxidase;protein_id=HBQ7391526.1;transl_table=11 DAFVNP010000070.1 tpg gene 10034 11575 . - . ID=gene-L8R42_003476;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=L8R42_003476 DAFVNP010000070.1 Protein Homology CDS 10034 11575 . - 0 ID=cds-HBQ7391527.1;Parent=gene-L8R42_003476;Dbxref=NCBI_GP:HBQ7391527.1;Name=HBQ7391527.1;gbkey=CDS;gene=tyrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=L8R42_003476;product=transcriptional regulator TyrR;protein_id=HBQ7391527.1;transl_table=11 DAFVNP010000070.1 tpg gene 11723 12784 . - . ID=gene-L8R42_003477;Name=L8R42_003477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003477 DAFVNP010000070.1 Protein Homology CDS 11723 12784 . - 0 ID=cds-HBQ7391528.1;Parent=gene-L8R42_003477;Dbxref=NCBI_GP:HBQ7391528.1;Name=HBQ7391528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=L8R42_003477;product=TIGR01620 family protein;protein_id=HBQ7391528.1;transl_table=11 DAFVNP010000070.1 tpg gene 12781 14178 . - . ID=gene-L8R42_003478;Name=L8R42_003478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003478 DAFVNP010000070.1 Protein Homology CDS 12781 14178 . - 0 ID=cds-HBQ7391529.1;Parent=gene-L8R42_003478;Dbxref=NCBI_GP:HBQ7391529.1;Name=HBQ7391529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=L8R42_003478;product=YcjX family protein;protein_id=HBQ7391529.1;transl_table=11 DAFVNP010000070.1 tpg gene 14327 14641 . - . ID=gene-L8R42_003479;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=L8R42_003479 DAFVNP010000070.1 Protein Homology CDS 14327 14641 . - 0 ID=cds-HBQ7391530.1;Parent=gene-L8R42_003479;Dbxref=NCBI_GP:HBQ7391530.1;Name=HBQ7391530.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=L8R42_003479;product=thiosulfate sulfurtransferase PspE;protein_id=HBQ7391530.1;transl_table=11 DAFVNP010000070.1 tpg gene 14717 14935 . - . ID=gene-L8R42_003480;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=L8R42_003480 DAFVNP010000070.1 Protein Homology CDS 14717 14935 . - 0 ID=cds-HBQ7391531.1;Parent=gene-L8R42_003480;Dbxref=NCBI_GP:HBQ7391531.1;Name=HBQ7391531.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=L8R42_003480;product=phage shock protein PspD;protein_id=HBQ7391531.1;transl_table=11 DAFVNP010000070.1 tpg pseudogene 14958 15316 . - . ID=gene-L8R42_003481;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=pseudogene;locus_tag=L8R42_003481;pseudo=true DAFVNP010000070.1 Protein Homology CDS 14958 15316 . - 0 ID=cds-L8R42_003481;Parent=gene-L8R42_003481;Note=frameshifted;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=L8R42_003481;product=envelope stress response membrane protein PspC;pseudo=true;transl_table=11 DAFVNP010000070.1 tpg gene 15316 15540 . - . ID=gene-L8R42_003482;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=L8R42_003482 DAFVNP010000070.1 Protein Homology CDS 15316 15540 . - 0 ID=cds-HBQ7391532.1;Parent=gene-L8R42_003482;Dbxref=NCBI_GP:HBQ7391532.1;Name=HBQ7391532.1;gbkey=CDS;gene=pspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=L8R42_003482;product=envelope stress response membrane protein PspB;protein_id=HBQ7391532.1;transl_table=11 DAFVNP010000070.1 tpg gene 15600 16268 . - . ID=gene-L8R42_003483;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=L8R42_003483 DAFVNP010000070.1 Protein Homology CDS 15600 16268 . - 0 ID=cds-HBQ7391533.1;Parent=gene-L8R42_003483;Dbxref=NCBI_GP:HBQ7391533.1;Name=HBQ7391533.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=L8R42_003483;product=phage shock protein PspA;protein_id=HBQ7391533.1;transl_table=11 DAFVNP010000070.1 tpg gene 16439 17419 . + . ID=gene-L8R42_003484;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=L8R42_003484 DAFVNP010000070.1 Protein Homology CDS 16439 17419 . + 0 ID=cds-HBQ7391534.1;Parent=gene-L8R42_003484;Dbxref=NCBI_GP:HBQ7391534.1;Name=HBQ7391534.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=L8R42_003484;product=phage shock protein operon transcriptional activator;protein_id=HBQ7391534.1;transl_table=11 DAFVNP010000070.1 tpg gene 17531 19180 . + . ID=gene-L8R42_003485;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=L8R42_003485 DAFVNP010000070.1 Protein Homology CDS 17531 19180 . + 0 ID=cds-HBQ7391535.1;Parent=gene-L8R42_003485;Dbxref=NCBI_GP:HBQ7391535.1;Name=HBQ7391535.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=L8R42_003485;product=peptide ABC transporter substrate-binding protein SapA;protein_id=HBQ7391535.1;transl_table=11 DAFVNP010000070.1 tpg gene 19177 20142 . + . ID=gene-L8R42_003486;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=L8R42_003486 DAFVNP010000070.1 Protein Homology CDS 19177 20142 . + 0 ID=cds-HBQ7391536.1;Parent=gene-L8R42_003486;Dbxref=NCBI_GP:HBQ7391536.1;Name=HBQ7391536.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=L8R42_003486;product=peptide ABC transporter permease SapB;protein_id=HBQ7391536.1;transl_table=11 DAFVNP010000070.1 tpg gene 20129 21019 . + . ID=gene-L8R42_003487;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=L8R42_003487 DAFVNP010000070.1 Protein Homology CDS 20129 21019 . + 0 ID=cds-HBQ7391537.1;Parent=gene-L8R42_003487;Dbxref=NCBI_GP:HBQ7391537.1;Name=HBQ7391537.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=L8R42_003487;product=peptide ABC transporter permease SapC;protein_id=HBQ7391537.1;transl_table=11 DAFVNP010000070.1 tpg gene 21019 22011 . + . ID=gene-L8R42_003488;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=L8R42_003488 DAFVNP010000070.1 Protein Homology CDS 21019 22011 . + 0 ID=cds-HBQ7391538.1;Parent=gene-L8R42_003488;Dbxref=NCBI_GP:HBQ7391538.1;Name=HBQ7391538.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=L8R42_003488;product=peptide ABC transporter ATP-binding protein SapD;protein_id=HBQ7391538.1;transl_table=11 DAFVNP010000070.1 tpg gene 22013 22819 . + . ID=gene-L8R42_003489;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=L8R42_003489 DAFVNP010000070.1 Protein Homology CDS 22013 22819 . + 0 ID=cds-HBQ7391539.1;Parent=gene-L8R42_003489;Dbxref=NCBI_GP:HBQ7391539.1;Name=HBQ7391539.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=L8R42_003489;product=peptide ABC transporter ATP-binding protein SapF;protein_id=HBQ7391539.1;transl_table=11 DAFVNP010000070.1 tpg gene 22835 23542 . - . ID=gene-L8R42_003490;Name=L8R42_003490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003490 DAFVNP010000070.1 Protein Homology CDS 22835 23542 . - 0 ID=cds-HBQ7391540.1;Parent=gene-L8R42_003490;Dbxref=NCBI_GP:HBQ7391540.1;Name=HBQ7391540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=L8R42_003490;product=EAL domain-containing protein;protein_id=HBQ7391540.1;transl_table=11 DAFVNP010000070.1 tpg gene 24009 24986 . - . ID=gene-L8R42_003491;Name=L8R42_003491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003491 DAFVNP010000070.1 Protein Homology CDS 24009 24986 . - 0 ID=cds-HBQ7391541.1;Parent=gene-L8R42_003491;Dbxref=NCBI_GP:HBQ7391541.1;Name=HBQ7391541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140687.1;locus_tag=L8R42_003491;product=hydrogenase;protein_id=HBQ7391541.1;transl_table=11 ##sequence-region DAFVNP010000071.1 1 24997 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000071.1 tpg region 1 24997 . + . ID=DAFVNP010000071.1:1..24997;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000071.1 tpg gene 64 1044 . + . ID=gene-L8R42_003492;Name=L8R42_003492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003492 DAFVNP010000071.1 Protein Homology CDS 64 1044 . + 0 ID=cds-HBQ7391542.1;Parent=gene-L8R42_003492;Dbxref=NCBI_GP:HBQ7391542.1;Name=HBQ7391542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=L8R42_003492;product=hypothetical protein;protein_id=HBQ7391542.1;transl_table=11 DAFVNP010000071.1 tpg gene 1041 1580 . - . ID=gene-L8R42_003493;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=L8R42_003493 DAFVNP010000071.1 Protein Homology CDS 1041 1580 . - 0 ID=cds-HBQ7391543.1;Parent=gene-L8R42_003493;Dbxref=NCBI_GP:HBQ7391543.1;Name=HBQ7391543.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=L8R42_003493;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=HBQ7391543.1;transl_table=11 DAFVNP010000071.1 tpg gene 1797 2915 . + . ID=gene-L8R42_003494;Name=L8R42_003494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003494 DAFVNP010000071.1 Protein Homology CDS 1797 2915 . + 0 ID=cds-HBQ7391544.1;Parent=gene-L8R42_003494;Dbxref=NCBI_GP:HBQ7391544.1;Name=HBQ7391544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=L8R42_003494;product=M42 family metallopeptidase;protein_id=HBQ7391544.1;transl_table=11 DAFVNP010000071.1 tpg gene 2912 3193 . + . ID=gene-L8R42_003495;Name=L8R42_003495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003495 DAFVNP010000071.1 Protein Homology CDS 2912 3193 . + 0 ID=cds-HBQ7391545.1;Parent=gene-L8R42_003495;Dbxref=NCBI_GP:HBQ7391545.1;Name=HBQ7391545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=L8R42_003495;product=PTS sugar transporter subunit IIB;protein_id=HBQ7391545.1;transl_table=11 DAFVNP010000071.1 tpg gene 3204 4517 . + . ID=gene-L8R42_003496;Name=L8R42_003496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003496 DAFVNP010000071.1 Protein Homology CDS 3204 4517 . + 0 ID=cds-HBQ7391546.1;Parent=gene-L8R42_003496;Dbxref=NCBI_GP:HBQ7391546.1;Name=HBQ7391546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=L8R42_003496;product=permease;protein_id=HBQ7391546.1;transl_table=11 DAFVNP010000071.1 tpg gene 4531 5337 . + . ID=gene-L8R42_003497;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=L8R42_003497 DAFVNP010000071.1 Protein Homology CDS 4531 5337 . + 0 ID=cds-HBQ7391547.1;Parent=gene-L8R42_003497;Dbxref=NCBI_GP:HBQ7391547.1;Name=HBQ7391547.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=L8R42_003497;product=BtpA family protein SgcQ;protein_id=HBQ7391547.1;transl_table=11 DAFVNP010000071.1 tpg gene 5469 5906 . + . ID=gene-L8R42_003498;Name=L8R42_003498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003498 DAFVNP010000071.1 Protein Homology CDS 5469 5906 . + 0 ID=cds-HBQ7391548.1;Parent=gene-L8R42_003498;Dbxref=NCBI_GP:HBQ7391548.1;Name=HBQ7391548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=L8R42_003498;product=PTS sugar transporter subunit IIA;protein_id=HBQ7391548.1;transl_table=11 DAFVNP010000071.1 tpg gene 5918 6550 . + . ID=gene-L8R42_003499;Name=L8R42_003499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003499 DAFVNP010000071.1 Protein Homology CDS 5918 6550 . + 0 ID=cds-HBQ7391549.1;Parent=gene-L8R42_003499;Dbxref=NCBI_GP:HBQ7391549.1;Name=HBQ7391549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=L8R42_003499;product=ribulose-phosphate 3 epimerase family protein;protein_id=HBQ7391549.1;transl_table=11 DAFVNP010000071.1 tpg gene 6566 7357 . + . ID=gene-L8R42_003500;Name=L8R42_003500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003500 DAFVNP010000071.1 Protein Homology CDS 6566 7357 . + 0 ID=cds-HBQ7391550.1;Parent=gene-L8R42_003500;Dbxref=NCBI_GP:HBQ7391550.1;Name=HBQ7391550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=L8R42_003500;product=DeoR/GlpR transcriptional regulator;protein_id=HBQ7391550.1;transl_table=11 DAFVNP010000071.1 tpg gene 7357 7794 . + . ID=gene-L8R42_003501;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=L8R42_003501 DAFVNP010000071.1 Protein Homology CDS 7357 7794 . + 0 ID=cds-HBQ7391551.1;Parent=gene-L8R42_003501;Dbxref=NCBI_GP:HBQ7391551.1;Name=HBQ7391551.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=L8R42_003501;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=HBQ7391551.1;transl_table=11 DAFVNP010000071.1 tpg gene 7935 9188 . - . ID=gene-L8R42_003502;Name=L8R42_003502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003502 DAFVNP010000071.1 Protein Homology CDS 7935 9188 . - 0 ID=cds-HBQ7391552.1;Parent=gene-L8R42_003502;Dbxref=NCBI_GP:HBQ7391552.1;Name=HBQ7391552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=L8R42_003502;product=starvation-sensing protein RspA;protein_id=HBQ7391552.1;transl_table=11 DAFVNP010000071.1 tpg gene 9526 10293 . + . ID=gene-L8R42_003503;Name=L8R42_003503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003503 DAFVNP010000071.1 Protein Homology CDS 9526 10293 . + 0 ID=cds-HBQ7391553.1;Parent=gene-L8R42_003503;Dbxref=NCBI_GP:HBQ7391553.1;Name=HBQ7391553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=L8R42_003503;product=SDR family oxidoreductase;protein_id=HBQ7391553.1;transl_table=11 DAFVNP010000071.1 tpg gene 10377 11738 . + . ID=gene-L8R42_003504;Name=L8R42_003504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003504 DAFVNP010000071.1 Protein Homology CDS 10377 11738 . + 0 ID=cds-HBQ7391554.1;Parent=gene-L8R42_003504;Dbxref=NCBI_GP:HBQ7391554.1;Name=HBQ7391554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=L8R42_003504;product=MFS transporter;protein_id=HBQ7391554.1;transl_table=11 DAFVNP010000071.1 tpg gene 11707 12798 . + . ID=gene-L8R42_003505;Name=L8R42_003505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003505 DAFVNP010000071.1 Protein Homology CDS 11707 12798 . + 0 ID=cds-HBQ7391555.1;Parent=gene-L8R42_003505;Dbxref=NCBI_GP:HBQ7391555.1;Name=HBQ7391555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=L8R42_003505;product=L-idonate 5-dehydrogenase;protein_id=HBQ7391555.1;transl_table=11 DAFVNP010000071.1 tpg gene 12889 13608 . + . ID=gene-L8R42_003506;Name=L8R42_003506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003506 DAFVNP010000071.1 Protein Homology CDS 12889 13608 . + 0 ID=cds-HBQ7391556.1;Parent=gene-L8R42_003506;Dbxref=NCBI_GP:HBQ7391556.1;Name=HBQ7391556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=L8R42_003506;product=FadR family transcriptional regulator;protein_id=HBQ7391556.1;transl_table=11 DAFVNP010000071.1 tpg gene 13786 14361 . - . ID=gene-L8R42_003507;Name=L8R42_003507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003507 DAFVNP010000071.1 Protein Homology CDS 13786 14361 . - 0 ID=cds-HBQ7391557.1;Parent=gene-L8R42_003507;Dbxref=NCBI_GP:HBQ7391557.1;Name=HBQ7391557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=L8R42_003507;product=polyisoprenoid-binding protein;protein_id=HBQ7391557.1;transl_table=11 DAFVNP010000071.1 tpg gene 14557 16212 . - . ID=gene-L8R42_003508;Name=L8R42_003508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003508 DAFVNP010000071.1 Protein Homology CDS 14557 16212 . - 0 ID=cds-HBQ7391558.1;Parent=gene-L8R42_003508;Dbxref=NCBI_GP:HBQ7391558.1;Name=HBQ7391558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=L8R42_003508;product=glucan biosynthesis protein;protein_id=HBQ7391558.1;transl_table=11 DAFVNP010000071.1 tpg gene 16432 17940 . - . ID=gene-L8R42_003509;Name=L8R42_003509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003509 DAFVNP010000071.1 Protein Homology CDS 16432 17940 . - 0 ID=cds-HBQ7391559.1;Parent=gene-L8R42_003509;Dbxref=NCBI_GP:HBQ7391559.1;Name=HBQ7391559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=L8R42_003509;product=carboxylesterase/lipase family protein;protein_id=HBQ7391559.1;transl_table=11 DAFVNP010000071.1 tpg gene 17989 19332 . - . ID=gene-L8R42_003510;Name=L8R42_003510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003510 DAFVNP010000071.1 Protein Homology CDS 17989 19332 . - 0 ID=cds-HBQ7391560.1;Parent=gene-L8R42_003510;Dbxref=NCBI_GP:HBQ7391560.1;Name=HBQ7391560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=L8R42_003510;product=VOC family protein;protein_id=HBQ7391560.1;transl_table=11 DAFVNP010000071.1 tpg gene 19625 20548 . + . ID=gene-L8R42_003511;Name=L8R42_003511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003511 DAFVNP010000071.1 Protein Homology CDS 19625 20548 . + 0 ID=cds-HBQ7391561.1;Parent=gene-L8R42_003511;Dbxref=NCBI_GP:HBQ7391561.1;Name=HBQ7391561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=L8R42_003511;product=LysR family transcriptional regulator;protein_id=HBQ7391561.1;transl_table=11 DAFVNP010000071.1 tpg gene 20609 22234 . - . ID=gene-L8R42_003512;Name=L8R42_003512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003512 DAFVNP010000071.1 Protein Homology CDS 20609 22234 . - 0 ID=cds-HBQ7391562.1;Parent=gene-L8R42_003512;Dbxref=NCBI_GP:HBQ7391562.1;Name=HBQ7391562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=L8R42_003512;product=Tar ligand binding domain-containing protein;protein_id=HBQ7391562.1;transl_table=11 DAFVNP010000071.1 tpg gene 22404 23522 . - . ID=gene-L8R42_003513;Name=L8R42_003513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003513 DAFVNP010000071.1 Protein Homology CDS 22404 23522 . - 0 ID=cds-HBQ7391563.1;Parent=gene-L8R42_003513;Dbxref=NCBI_GP:HBQ7391563.1;Name=HBQ7391563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=L8R42_003513;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=HBQ7391563.1;transl_table=11 DAFVNP010000071.1 tpg gene 23554 23829 . - . ID=gene-L8R42_003514;Name=L8R42_003514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003514 DAFVNP010000071.1 Protein Homology CDS 23554 23829 . - 0 ID=cds-HBQ7391564.1;Parent=gene-L8R42_003514;Dbxref=NCBI_GP:HBQ7391564.1;Name=HBQ7391564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=L8R42_003514;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=HBQ7391564.1;transl_table=11 DAFVNP010000071.1 tpg gene 24348 24749 . + . ID=gene-L8R42_003515;Name=L8R42_003515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003515 DAFVNP010000071.1 Protein Homology CDS 24348 24749 . + 0 ID=cds-HBQ7391565.1;Parent=gene-L8R42_003515;Dbxref=NCBI_GP:HBQ7391565.1;Name=HBQ7391565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=L8R42_003515;product=effector protein;protein_id=HBQ7391565.1;transl_table=11 ##sequence-region DAFVNP010000072.1 1 24053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000072.1 tpg region 1 24053 . + . ID=DAFVNP010000072.1:1..24053;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000072.1 tpg gene 1 434 . + . ID=gene-L8R42_003516;Name=L8R42_003516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003516;partial=true;start_range=.,1 DAFVNP010000072.1 Protein Homology CDS 1 434 . + 2 ID=cds-HBQ7391566.1;Parent=gene-L8R42_003516;Dbxref=NCBI_GP:HBQ7391566.1;Name=HBQ7391566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=L8R42_003516;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=HBQ7391566.1;start_range=.,1;transl_table=11 DAFVNP010000072.1 tpg gene 473 1240 . - . ID=gene-L8R42_003517;Name=L8R42_003517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003517 DAFVNP010000072.1 Protein Homology CDS 473 1240 . - 0 ID=cds-HBQ7391567.1;Parent=gene-L8R42_003517;Dbxref=NCBI_GP:HBQ7391567.1;Name=HBQ7391567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=L8R42_003517;product=DedA family protein;protein_id=HBQ7391567.1;transl_table=11 DAFVNP010000072.1 tpg gene 1359 2204 . - . ID=gene-L8R42_003518;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=L8R42_003518 DAFVNP010000072.1 Protein Homology CDS 1359 2204 . - 0 ID=cds-HBQ7391568.1;Parent=gene-L8R42_003518;Dbxref=NCBI_GP:HBQ7391568.1;Name=HBQ7391568.1;gbkey=CDS;gene=araC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=L8R42_003518;product=arabinose operon transcriptional regulator AraC;protein_id=HBQ7391568.1;transl_table=11 DAFVNP010000072.1 tpg gene 2545 4254 . + . ID=gene-L8R42_003519;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=L8R42_003519 DAFVNP010000072.1 Protein Homology CDS 2545 4254 . + 0 ID=cds-HBQ7391569.1;Parent=gene-L8R42_003519;Dbxref=NCBI_GP:HBQ7391569.1;Name=HBQ7391569.1;gbkey=CDS;gene=araB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=L8R42_003519;product=ribulokinase;protein_id=HBQ7391569.1;transl_table=11 DAFVNP010000072.1 tpg gene 4265 5767 . + . ID=gene-L8R42_003520;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=L8R42_003520 DAFVNP010000072.1 Protein Homology CDS 4265 5767 . + 0 ID=cds-HBQ7391570.1;Parent=gene-L8R42_003520;Dbxref=NCBI_GP:HBQ7391570.1;Name=HBQ7391570.1;gbkey=CDS;gene=araA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=L8R42_003520;product=L-arabinose isomerase;protein_id=HBQ7391570.1;transl_table=11 DAFVNP010000072.1 tpg gene 5908 6603 . + . ID=gene-L8R42_003521;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=L8R42_003521 DAFVNP010000072.1 Protein Homology CDS 5908 6603 . + 0 ID=cds-HBQ7391571.1;Parent=gene-L8R42_003521;Dbxref=NCBI_GP:HBQ7391571.1;Name=HBQ7391571.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=L8R42_003521;product=L-ribulose-5-phosphate 4-epimerase;protein_id=HBQ7391571.1;transl_table=11 DAFVNP010000072.1 tpg gene 6609 7028 . - . ID=gene-L8R42_003522;Name=L8R42_003522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003522 DAFVNP010000072.1 Protein Homology CDS 6609 7028 . - 0 ID=cds-HBQ7391572.1;Parent=gene-L8R42_003522;Dbxref=NCBI_GP:HBQ7391572.1;Name=HBQ7391572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=L8R42_003522;product=DUF4751 family protein;protein_id=HBQ7391572.1;transl_table=11 DAFVNP010000072.1 tpg pseudogene 7243 7452 . - . ID=gene-L8R42_003523;Name=L8R42_003523;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003523;pseudo=true DAFVNP010000072.1 Protein Homology CDS 7243 7452 . - 0 ID=cds-L8R42_003523;Parent=gene-L8R42_003523;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446563.1;locus_tag=L8R42_003523;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000072.1 tpg pseudogene 7546 7944 . + . ID=gene-L8R42_003524;Name=L8R42_003524;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003524;pseudo=true DAFVNP010000072.1 Protein Homology CDS 7546 7944 . + 0 ID=cds-L8R42_003524;Parent=gene-L8R42_003524;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=L8R42_003524;product=YdcF family protein;pseudo=true;transl_table=11 DAFVNP010000072.1 tpg gene 8020 9225 . - . ID=gene-L8R42_003525;Name=L8R42_003525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003525 DAFVNP010000072.1 Protein Homology CDS 8020 9225 . - 0 ID=cds-HBQ7391573.1;Parent=gene-L8R42_003525;Dbxref=NCBI_GP:HBQ7391573.1;Name=HBQ7391573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669153.1;locus_tag=L8R42_003525;product=transposase;protein_id=HBQ7391573.1;transl_table=11 DAFVNP010000072.1 tpg gene 9284 9688 . + . ID=gene-L8R42_003526;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=L8R42_003526 DAFVNP010000072.1 Protein Homology CDS 9284 9688 . + 0 ID=cds-HBQ7391574.1;Parent=gene-L8R42_003526;Dbxref=NCBI_GP:HBQ7391574.1;Name=HBQ7391574.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1;locus_tag=L8R42_003526;product=IS200/IS605 family transposase;protein_id=HBQ7391574.1;transl_table=11 DAFVNP010000072.1 tpg gene 9754 9984 . + . ID=gene-L8R42_003527;Name=L8R42_003527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003527 DAFVNP010000072.1 Protein Homology CDS 9754 9984 . + 0 ID=cds-HBQ7391575.1;Parent=gene-L8R42_003527;Dbxref=NCBI_GP:HBQ7391575.1;Name=HBQ7391575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000423444.1;locus_tag=L8R42_003527;product=hypothetical protein;protein_id=HBQ7391575.1;transl_table=11 DAFVNP010000072.1 tpg gene 10028 12379 . + . ID=gene-L8R42_003528;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=L8R42_003528 DAFVNP010000072.1 Protein Homology CDS 10028 12379 . + 0 ID=cds-HBQ7391576.1;Parent=gene-L8R42_003528;Dbxref=NCBI_GP:HBQ7391576.1;Name=HBQ7391576.1;gbkey=CDS;gene=polB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=L8R42_003528;product=DNA polymerase II;protein_id=HBQ7391576.1;transl_table=11 DAFVNP010000072.1 tpg gene 12553 15459 . + . ID=gene-L8R42_003529;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=L8R42_003529 DAFVNP010000072.1 Protein Homology CDS 12553 15459 . + 0 ID=cds-HBQ7391577.1;Parent=gene-L8R42_003529;Dbxref=NCBI_GP:HBQ7391577.1;Name=HBQ7391577.1;gbkey=CDS;gene=rapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=L8R42_003529;product=RNA polymerase-associated protein RapA;protein_id=HBQ7391577.1;transl_table=11 DAFVNP010000072.1 tpg gene 15471 16130 . + . ID=gene-L8R42_003530;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=L8R42_003530 DAFVNP010000072.1 Protein Homology CDS 15471 16130 . + 0 ID=cds-HBQ7391578.1;Parent=gene-L8R42_003530;Dbxref=NCBI_GP:HBQ7391578.1;Name=HBQ7391578.1;gbkey=CDS;gene=rluA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=L8R42_003530;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=HBQ7391578.1;transl_table=11 DAFVNP010000072.1 tpg gene 16225 17037 . - . ID=gene-L8R42_003531;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=L8R42_003531 DAFVNP010000072.1 Protein Homology CDS 16225 17037 . - 0 ID=cds-HBQ7391579.1;Parent=gene-L8R42_003531;Dbxref=NCBI_GP:HBQ7391579.1;Name=HBQ7391579.1;gbkey=CDS;gene=djlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=L8R42_003531;product=co-chaperone DjlA;protein_id=HBQ7391579.1;transl_table=11 DAFVNP010000072.1 tpg gene 17291 19651 . + . ID=gene-L8R42_003532;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=L8R42_003532 DAFVNP010000072.1 Protein Homology CDS 17291 19651 . + 0 ID=cds-HBQ7391580.1;Parent=gene-L8R42_003532;Dbxref=NCBI_GP:HBQ7391580.1;Name=HBQ7391580.1;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=L8R42_003532;product=LPS assembly protein LptD;protein_id=HBQ7391580.1;transl_table=11 DAFVNP010000072.1 tpg gene 19705 20991 . + . ID=gene-L8R42_003533;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=L8R42_003533 DAFVNP010000072.1 Protein Homology CDS 19705 20991 . + 0 ID=cds-HBQ7391581.1;Parent=gene-L8R42_003533;Dbxref=NCBI_GP:HBQ7391581.1;Name=HBQ7391581.1;gbkey=CDS;gene=surA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=L8R42_003533;product=peptidylprolyl isomerase SurA;protein_id=HBQ7391581.1;transl_table=11 DAFVNP010000072.1 tpg gene 20991 21980 . + . ID=gene-L8R42_003534;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=L8R42_003534 DAFVNP010000072.1 Protein Homology CDS 20991 21980 . + 0 ID=cds-HBQ7391582.1;Parent=gene-L8R42_003534;Dbxref=NCBI_GP:HBQ7391582.1;Name=HBQ7391582.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=L8R42_003534;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=HBQ7391582.1;transl_table=11 DAFVNP010000072.1 tpg gene 21977 22798 . + . ID=gene-L8R42_003535;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=L8R42_003535 DAFVNP010000072.1 Protein Homology CDS 21977 22798 . + 0 ID=cds-HBQ7391583.1;Parent=gene-L8R42_003535;Dbxref=NCBI_GP:HBQ7391583.1;Name=HBQ7391583.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=L8R42_003535;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=HBQ7391583.1;transl_table=11 DAFVNP010000072.1 tpg gene 22801 23178 . + . ID=gene-L8R42_003536;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=L8R42_003536 DAFVNP010000072.1 Protein Homology CDS 22801 23178 . + 0 ID=cds-HBQ7391584.1;Parent=gene-L8R42_003536;Dbxref=NCBI_GP:HBQ7391584.1;Name=HBQ7391584.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=L8R42_003536;product=Co2+/Mg2+ efflux protein ApaG;protein_id=HBQ7391584.1;transl_table=11 DAFVNP010000072.1 tpg gene 23189 24037 . + . ID=gene-L8R42_003537;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=L8R42_003537 DAFVNP010000072.1 Protein Homology CDS 23189 24037 . + 0 ID=cds-HBQ7391585.1;Parent=gene-L8R42_003537;Dbxref=NCBI_GP:HBQ7391585.1;Name=HBQ7391585.1;gbkey=CDS;gene=apaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=L8R42_003537;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=HBQ7391585.1;transl_table=11 ##sequence-region DAFVNP010000073.1 1 23778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000073.1 tpg region 1 23778 . + . ID=DAFVNP010000073.1:1..23778;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000073.1 tpg gene 90 1022 . + . ID=gene-L8R42_003538;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=L8R42_003538 DAFVNP010000073.1 Protein Homology CDS 90 1022 . + 0 ID=cds-HBQ7391586.1;Parent=gene-L8R42_003538;Dbxref=NCBI_GP:HBQ7391586.1;Name=HBQ7391586.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=L8R42_003538;product=6-phosphofructokinase II;protein_id=HBQ7391586.1;transl_table=11 DAFVNP010000073.1 tpg gene 1119 1409 . + . ID=gene-L8R42_003539;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=L8R42_003539 DAFVNP010000073.1 Protein Homology CDS 1119 1409 . + 0 ID=cds-HBQ7391587.1;Parent=gene-L8R42_003539;Dbxref=NCBI_GP:HBQ7391587.1;Name=HBQ7391587.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=L8R42_003539;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=HBQ7391587.1;transl_table=11 DAFVNP010000073.1 tpg gene 1516 2376 . + . ID=gene-L8R42_003540;Name=L8R42_003540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003540 DAFVNP010000073.1 Protein Homology CDS 1516 2376 . + 0 ID=cds-HBQ7391588.1;Parent=gene-L8R42_003540;Dbxref=NCBI_GP:HBQ7391588.1;Name=HBQ7391588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=L8R42_003540;product=fructosamine kinase family protein;protein_id=HBQ7391588.1;transl_table=11 DAFVNP010000073.1 tpg gene 2419 2955 . - . ID=gene-L8R42_003541;Name=L8R42_003541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003541 DAFVNP010000073.1 Protein Homology CDS 2419 2955 . - 0 ID=cds-HBQ7391589.1;Parent=gene-L8R42_003541;Dbxref=NCBI_GP:HBQ7391589.1;Name=HBQ7391589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=L8R42_003541;product=YniB family protein;protein_id=HBQ7391589.1;transl_table=11 DAFVNP010000073.1 tpg gene 3104 3772 . + . ID=gene-L8R42_003542;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=L8R42_003542 DAFVNP010000073.1 Protein Homology CDS 3104 3772 . + 0 ID=cds-HBQ7391590.1;Parent=gene-L8R42_003542;Dbxref=NCBI_GP:HBQ7391590.1;Name=HBQ7391590.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=L8R42_003542;product=hexitol phosphatase HxpB;protein_id=HBQ7391590.1;transl_table=11 DAFVNP010000073.1 tpg gene 3910 4509 . + . ID=gene-L8R42_003543;Name=L8R42_003543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003543 DAFVNP010000073.1 Protein Homology CDS 3910 4509 . + 0 ID=cds-HBQ7391591.1;Parent=gene-L8R42_003543;Dbxref=NCBI_GP:HBQ7391591.1;Name=HBQ7391591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=L8R42_003543;product=metal-dependent hydrolase;protein_id=HBQ7391591.1;transl_table=11 DAFVNP010000073.1 tpg gene 4646 6037 . + . ID=gene-L8R42_003544;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=L8R42_003544 DAFVNP010000073.1 Protein Homology CDS 4646 6037 . + 0 ID=cds-HBQ7391592.1;Parent=gene-L8R42_003544;Dbxref=NCBI_GP:HBQ7391592.1;Name=HBQ7391592.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=L8R42_003544;product=cystine/sulfocysteine:cation symporter;protein_id=HBQ7391592.1;transl_table=11 DAFVNP010000073.1 tpg gene 6139 6381 . - . ID=gene-L8R42_003545;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=L8R42_003545 DAFVNP010000073.1 Protein Homology CDS 6139 6381 . - 0 ID=cds-HBQ7391593.1;Parent=gene-L8R42_003545;Dbxref=NCBI_GP:HBQ7391593.1;Name=HBQ7391593.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=L8R42_003545;product=cell division activator CedA;protein_id=HBQ7391593.1;transl_table=11 DAFVNP010000073.1 tpg gene 6598 8850 . + . ID=gene-L8R42_003546;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=L8R42_003546 DAFVNP010000073.1 Protein Homology CDS 6598 8850 . + 0 ID=cds-HBQ7391594.1;Parent=gene-L8R42_003546;Dbxref=NCBI_GP:HBQ7391594.1;Name=HBQ7391594.1;gbkey=CDS;gene=katE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=L8R42_003546;product=catalase HPII;protein_id=HBQ7391594.1;transl_table=11 DAFVNP010000073.1 tpg gene 8894 9652 . - . ID=gene-L8R42_003547;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=L8R42_003547 DAFVNP010000073.1 Protein Homology CDS 8894 9652 . - 0 ID=cds-HBQ7391595.1;Parent=gene-L8R42_003547;Dbxref=NCBI_GP:HBQ7391595.1;Name=HBQ7391595.1;gbkey=CDS;gene=chbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=L8R42_003547;product=chitin disaccharide deacetylase;protein_id=HBQ7391595.1;transl_table=11 DAFVNP010000073.1 tpg gene 9665 11020 . - . ID=gene-L8R42_003548;Name=L8R42_003548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003548 DAFVNP010000073.1 Protein Homology CDS 9665 11020 . - 0 ID=cds-HBQ7391596.1;Parent=gene-L8R42_003548;Dbxref=NCBI_GP:HBQ7391596.1;Name=HBQ7391596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=L8R42_003548;product=6-phospho-beta-glucosidase;protein_id=HBQ7391596.1;transl_table=11 DAFVNP010000073.1 tpg gene 11145 11987 . - . ID=gene-L8R42_003549;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=L8R42_003549 DAFVNP010000073.1 Protein Homology CDS 11145 11987 . - 0 ID=cds-HBQ7391597.1;Parent=gene-L8R42_003549;Dbxref=NCBI_GP:HBQ7391597.1;Name=HBQ7391597.1;gbkey=CDS;gene=chbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=L8R42_003549;product=transcriptional regulator ChbR;protein_id=HBQ7391597.1;transl_table=11 DAFVNP010000073.1 tpg gene 11998 12345 . - . ID=gene-L8R42_003550;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=L8R42_003550 DAFVNP010000073.1 Protein Homology CDS 11998 12345 . - 0 ID=cds-HBQ7391598.1;Parent=gene-L8R42_003550;Dbxref=NCBI_GP:HBQ7391598.1;Name=HBQ7391598.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=L8R42_003550;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=HBQ7391598.1;transl_table=11 DAFVNP010000073.1 tpg gene 12396 13754 . - . ID=gene-L8R42_003551;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=L8R42_003551 DAFVNP010000073.1 Protein Homology CDS 12396 13754 . - 0 ID=cds-HBQ7391599.1;Parent=gene-L8R42_003551;Dbxref=NCBI_GP:HBQ7391599.1;Name=HBQ7391599.1;gbkey=CDS;gene=chbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=L8R42_003551;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=HBQ7391599.1;transl_table=11 DAFVNP010000073.1 tpg gene 13837 14157 . - . ID=gene-L8R42_003552;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=L8R42_003552 DAFVNP010000073.1 Protein Homology CDS 13837 14157 . - 0 ID=cds-HBQ7391600.1;Parent=gene-L8R42_003552;Dbxref=NCBI_GP:HBQ7391600.1;Name=HBQ7391600.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=L8R42_003552;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=HBQ7391600.1;transl_table=11 DAFVNP010000073.1 tpg gene 14458 14799 . - . ID=gene-L8R42_003553;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=L8R42_003553 DAFVNP010000073.1 Protein Homology CDS 14458 14799 . - 0 ID=cds-HBQ7391601.1;Parent=gene-L8R42_003553;Dbxref=NCBI_GP:HBQ7391601.1;Name=HBQ7391601.1;gbkey=CDS;gene=osmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=L8R42_003553;product=osmotically-inducible lipoprotein OsmE;protein_id=HBQ7391601.1;transl_table=11 DAFVNP010000073.1 tpg gene 15018 15845 . + . ID=gene-L8R42_003554;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=L8R42_003554 DAFVNP010000073.1 Protein Homology CDS 15018 15845 . + 0 ID=cds-HBQ7391602.1;Parent=gene-L8R42_003554;Dbxref=NCBI_GP:HBQ7391602.1;Name=HBQ7391602.1;gbkey=CDS;gene=nadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=L8R42_003554;product=ammonia-dependent NAD(+) synthetase;protein_id=HBQ7391602.1;transl_table=11 DAFVNP010000073.1 tpg gene 15966 16847 . + . ID=gene-L8R42_003555;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=L8R42_003555 DAFVNP010000073.1 Protein Homology CDS 15966 16847 . + 0 ID=cds-HBQ7391603.1;Parent=gene-L8R42_003555;Dbxref=NCBI_GP:HBQ7391603.1;Name=HBQ7391603.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=L8R42_003555;product=excinuclease Cho;protein_id=HBQ7391603.1;transl_table=11 DAFVNP010000073.1 tpg gene 16922 17407 . - . ID=gene-L8R42_003556;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=L8R42_003556 DAFVNP010000073.1 Protein Homology CDS 16922 17407 . - 0 ID=cds-HBQ7391604.1;Parent=gene-L8R42_003556;Dbxref=NCBI_GP:HBQ7391604.1;Name=HBQ7391604.1;gbkey=CDS;gene=spy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=L8R42_003556;product=ATP-independent periplasmic protein-refolding chaperone;protein_id=HBQ7391604.1;transl_table=11 DAFVNP010000073.1 tpg gene 17743 18711 . - . ID=gene-L8R42_003557;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=L8R42_003557 DAFVNP010000073.1 Protein Homology CDS 17743 18711 . - 0 ID=cds-HBQ7391605.1;Parent=gene-L8R42_003557;Dbxref=NCBI_GP:HBQ7391605.1;Name=HBQ7391605.1;gbkey=CDS;gene=astE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=L8R42_003557;product=succinylglutamate desuccinylase;protein_id=HBQ7391605.1;transl_table=11 DAFVNP010000073.1 tpg gene 18704 20047 . - . ID=gene-L8R42_003558;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=L8R42_003558 DAFVNP010000073.1 Protein Homology CDS 18704 20047 . - 0 ID=cds-HBQ7391606.1;Parent=gene-L8R42_003558;Dbxref=NCBI_GP:HBQ7391606.1;Name=HBQ7391606.1;gbkey=CDS;gene=astB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=L8R42_003558;product=N-succinylarginine dihydrolase;protein_id=HBQ7391606.1;transl_table=11 DAFVNP010000073.1 tpg gene 20044 21522 . - . ID=gene-L8R42_003559;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=L8R42_003559 DAFVNP010000073.1 Protein Homology CDS 20044 21522 . - 0 ID=cds-HBQ7391607.1;Parent=gene-L8R42_003559;Dbxref=NCBI_GP:HBQ7391607.1;Name=HBQ7391607.1;gbkey=CDS;gene=astD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=L8R42_003559;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=HBQ7391607.1;transl_table=11 DAFVNP010000073.1 tpg gene 21519 22553 . - . ID=gene-L8R42_003560;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=L8R42_003560 DAFVNP010000073.1 Protein Homology CDS 21519 22553 . - 0 ID=cds-HBQ7391608.1;Parent=gene-L8R42_003560;Dbxref=NCBI_GP:HBQ7391608.1;Name=HBQ7391608.1;gbkey=CDS;gene=astA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=L8R42_003560;product=arginine N-succinyltransferase;protein_id=HBQ7391608.1;transl_table=11 DAFVNP010000073.1 tpg gene 22544 23770 . - . ID=gene-L8R42_003561;Name=L8R42_003561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003561 DAFVNP010000073.1 Protein Homology CDS 22544 23770 . - 0 ID=cds-HBQ7391609.1;Parent=gene-L8R42_003561;Dbxref=NCBI_GP:HBQ7391609.1;Name=HBQ7391609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=L8R42_003561;product=aspartate aminotransferase family protein;protein_id=HBQ7391609.1;transl_table=11 ##sequence-region DAFVNP010000074.1 1 23267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000074.1 tpg region 1 23267 . + . ID=DAFVNP010000074.1:1..23267;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000074.1 tpg gene 121 444 . - . ID=gene-L8R42_003562;Name=L8R42_003562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003562 DAFVNP010000074.1 Protein Homology CDS 121 444 . - 0 ID=cds-HBQ7391610.1;Parent=gene-L8R42_003562;Dbxref=NCBI_GP:HBQ7391610.1;Name=HBQ7391610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=L8R42_003562;product=DUF1889 family protein;protein_id=HBQ7391610.1;transl_table=11 DAFVNP010000074.1 tpg gene 554 682 . - . ID=gene-L8R42_003563;Name=L8R42_003563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003563 DAFVNP010000074.1 Protein Homology CDS 554 682 . - 0 ID=cds-HBQ7391611.1;Parent=gene-L8R42_003563;Dbxref=NCBI_GP:HBQ7391611.1;Name=HBQ7391611.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.1;locus_tag=L8R42_003563;product=hypothetical protein;protein_id=HBQ7391611.1;transl_table=11 DAFVNP010000074.1 tpg pseudogene 651 995 . - . ID=gene-L8R42_003564;Name=L8R42_003564;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003564;pseudo=true DAFVNP010000074.1 Protein Homology CDS 651 995 . - 0 ID=cds-L8R42_003564;Parent=gene-L8R42_003564;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=L8R42_003564;product=diol dehydratase reactivase subunit alpha;pseudo=true;transl_table=11 DAFVNP010000074.1 tpg pseudogene 1108 1773 . + . ID=gene-L8R42_003565;Name=L8R42_003565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003565;pseudo=true DAFVNP010000074.1 Protein Homology CDS 1108 1773 . + 0 ID=cds-L8R42_003565;Parent=gene-L8R42_003565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=L8R42_003565;product=IS3 family transposase;pseudo=true;transl_table=11 DAFVNP010000074.1 tpg gene 1770 2045 . - . ID=gene-L8R42_003566;Name=L8R42_003566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003566 DAFVNP010000074.1 Protein Homology CDS 1770 2045 . - 0 ID=cds-HBQ7391612.1;Parent=gene-L8R42_003566;Dbxref=NCBI_GP:HBQ7391612.1;Name=HBQ7391612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632806.1;locus_tag=L8R42_003566;product=DUF4102 domain-containing protein;protein_id=HBQ7391612.1;transl_table=11 DAFVNP010000074.1 tpg gene 2209 2284 . - . ID=gene-L8R42_003567;Name=L8R42_003567;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_003567 DAFVNP010000074.1 tRNAscan-SE tRNA 2209 2284 . - . ID=rna-L8R42_003567;Parent=gene-L8R42_003567;anticodon=(pos:complement(2249..2251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003567;product=tRNA-Thr DAFVNP010000074.1 tRNAscan-SE exon 2209 2284 . - . ID=exon-L8R42_003567-1;Parent=rna-L8R42_003567;anticodon=(pos:complement(2249..2251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003567;product=tRNA-Thr DAFVNP010000074.1 tpg gene 2400 3650 . - . ID=gene-L8R42_003568;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=L8R42_003568 DAFVNP010000074.1 Protein Homology CDS 2400 3650 . - 0 ID=cds-HBQ7391613.1;Parent=gene-L8R42_003568;Dbxref=NCBI_GP:HBQ7391613.1;Name=HBQ7391613.1;gbkey=CDS;gene=proA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=L8R42_003568;product=glutamate-5-semialdehyde dehydrogenase;protein_id=HBQ7391613.1;transl_table=11 DAFVNP010000074.1 tpg gene 3662 4765 . - . ID=gene-L8R42_003569;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=L8R42_003569 DAFVNP010000074.1 Protein Homology CDS 3662 4765 . - 0 ID=cds-HBQ7391614.1;Parent=gene-L8R42_003569;Dbxref=NCBI_GP:HBQ7391614.1;Name=HBQ7391614.1;gbkey=CDS;gene=proB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=L8R42_003569;product=glutamate 5-kinase;protein_id=HBQ7391614.1;transl_table=11 DAFVNP010000074.1 tpg gene 5048 6100 . + . ID=gene-L8R42_003570;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=L8R42_003570 DAFVNP010000074.1 Protein Homology CDS 5048 6100 . + 0 ID=cds-HBQ7391615.1;Parent=gene-L8R42_003570;Dbxref=NCBI_GP:HBQ7391615.1;Name=HBQ7391615.1;gbkey=CDS;gene=phoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=L8R42_003570;product=phosphoporin PhoE;protein_id=HBQ7391615.1;transl_table=11 DAFVNP010000074.1 tpg gene 6151 6552 . - . ID=gene-L8R42_003571;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=L8R42_003571 DAFVNP010000074.1 Protein Homology CDS 6151 6552 . - 0 ID=cds-HBQ7391616.1;Parent=gene-L8R42_003571;Dbxref=NCBI_GP:HBQ7391616.1;Name=HBQ7391616.1;gbkey=CDS;gene=crl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=L8R42_003571;product=sigma factor-binding protein Crl;protein_id=HBQ7391616.1;transl_table=11 DAFVNP010000074.1 tpg gene 6610 7854 . - . ID=gene-L8R42_003572;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=L8R42_003572 DAFVNP010000074.1 Protein Homology CDS 6610 7854 . - 0 ID=cds-HBQ7391617.1;Parent=gene-L8R42_003572;Dbxref=NCBI_GP:HBQ7391617.1;Name=HBQ7391617.1;gbkey=CDS;gene=frsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=L8R42_003572;product=esterase FrsA;protein_id=HBQ7391617.1;transl_table=11 DAFVNP010000074.1 tpg gene 7943 8401 . - . ID=gene-L8R42_003573;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=L8R42_003573 DAFVNP010000074.1 Protein Homology CDS 7943 8401 . - 0 ID=cds-HBQ7391618.1;Parent=gene-L8R42_003573;Dbxref=NCBI_GP:HBQ7391618.1;Name=HBQ7391618.1;gbkey=CDS;gene=gpt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=L8R42_003573;product=xanthine phosphoribosyltransferase;protein_id=HBQ7391618.1;transl_table=11 DAFVNP010000074.1 tpg gene 8650 10107 . + . ID=gene-L8R42_003574;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=L8R42_003574 DAFVNP010000074.1 Protein Homology CDS 8650 10107 . + 0 ID=cds-HBQ7391619.1;Parent=gene-L8R42_003574;Dbxref=NCBI_GP:HBQ7391619.1;Name=HBQ7391619.1;gbkey=CDS;gene=pepD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=L8R42_003574;product=cytosol nonspecific dipeptidase;protein_id=HBQ7391619.1;transl_table=11 DAFVNP010000074.1 tpg gene 10262 10876 . - . ID=gene-L8R42_003575;Name=L8R42_003575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003575 DAFVNP010000074.1 Protein Homology CDS 10262 10876 . - 0 ID=cds-HBQ7391620.1;Parent=gene-L8R42_003575;Dbxref=NCBI_GP:HBQ7391620.1;Name=HBQ7391620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=L8R42_003575;product=peptide chain release factor H;protein_id=HBQ7391620.1;transl_table=11 DAFVNP010000074.1 tpg gene 10873 12012 . - . ID=gene-L8R42_003576;Name=L8R42_003576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003576 DAFVNP010000074.1 Protein Homology CDS 10873 12012 . - 0 ID=cds-HBQ7391621.1;Parent=gene-L8R42_003576;Dbxref=NCBI_GP:HBQ7391621.1;Name=HBQ7391621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=L8R42_003576;product=RNA ligase RtcB family protein;protein_id=HBQ7391621.1;transl_table=11 DAFVNP010000074.1 tpg gene 12230 13285 . - . ID=gene-L8R42_003577;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=L8R42_003577 DAFVNP010000074.1 Protein Homology CDS 12230 13285 . - 0 ID=cds-HBQ7391622.1;Parent=gene-L8R42_003577;Dbxref=NCBI_GP:HBQ7391622.1;Name=HBQ7391622.1;gbkey=CDS;gene=dinB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=L8R42_003577;product=DNA polymerase IV;protein_id=HBQ7391622.1;transl_table=11 DAFVNP010000074.1 tpg gene 13535 14275 . + . ID=gene-L8R42_003578;Name=L8R42_003578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003578 DAFVNP010000074.1 Protein Homology CDS 13535 14275 . + 0 ID=cds-HBQ7391623.1;Parent=gene-L8R42_003578;Dbxref=NCBI_GP:HBQ7391623.1;Name=HBQ7391623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=L8R42_003578;product=murein L%2CD-transpeptidase;protein_id=HBQ7391623.1;transl_table=11 DAFVNP010000074.1 tpg gene 14246 15013 . - . ID=gene-L8R42_003579;Name=L8R42_003579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003579 DAFVNP010000074.1 Protein Homology CDS 14246 15013 . - 0 ID=cds-HBQ7391624.1;Parent=gene-L8R42_003579;Dbxref=NCBI_GP:HBQ7391624.1;Name=HBQ7391624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=L8R42_003579;product=class II glutamine amidotransferase;protein_id=HBQ7391624.1;transl_table=11 DAFVNP010000074.1 tpg gene 15226 15804 . - . ID=gene-L8R42_003580;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=L8R42_003580 DAFVNP010000074.1 Protein Homology CDS 15226 15804 . - 0 ID=cds-HBQ7391625.1;Parent=gene-L8R42_003580;Dbxref=NCBI_GP:HBQ7391625.1;Name=HBQ7391625.1;gbkey=CDS;gene=lpcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=L8R42_003580;product=D-sedoheptulose 7-phosphate isomerase;protein_id=HBQ7391625.1;transl_table=11 DAFVNP010000074.1 tpg gene 16044 18488 . + . ID=gene-L8R42_003581;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=L8R42_003581 DAFVNP010000074.1 Protein Homology CDS 16044 18488 . + 0 ID=cds-HBQ7391626.1;Parent=gene-L8R42_003581;Dbxref=NCBI_GP:HBQ7391626.1;Name=HBQ7391626.1;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=L8R42_003581;product=acyl-CoA dehydrogenase FadE;protein_id=HBQ7391626.1;transl_table=11 DAFVNP010000074.1 tpg gene 18597 19364 . + . ID=gene-L8R42_003582;Name=L8R42_003582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003582 DAFVNP010000074.1 Protein Homology CDS 18597 19364 . + 0 ID=cds-HBQ7391627.1;Parent=gene-L8R42_003582;Dbxref=NCBI_GP:HBQ7391627.1;Name=HBQ7391627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=L8R42_003582;product=amidohydrolase;protein_id=HBQ7391627.1;transl_table=11 DAFVNP010000074.1 tpg gene 19674 20081 . + . ID=gene-L8R42_003583;Name=L8R42_003583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003583 DAFVNP010000074.1 Protein Homology CDS 19674 20081 . + 0 ID=cds-HBQ7391628.1;Parent=gene-L8R42_003583;Dbxref=NCBI_GP:HBQ7391628.1;Name=HBQ7391628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=L8R42_003583;product=Spy/CpxP family protein refolding chaperone;protein_id=HBQ7391628.1;transl_table=11 DAFVNP010000074.1 tpg gene 20412 21131 . + . ID=gene-L8R42_003584;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=L8R42_003584 DAFVNP010000074.1 Protein Homology CDS 20412 21131 . + 0 ID=cds-HBQ7391629.1;Parent=gene-L8R42_003584;Dbxref=NCBI_GP:HBQ7391629.1;Name=HBQ7391629.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=L8R42_003584;product=adhesin/invasin protein PagN;protein_id=HBQ7391629.1;transl_table=11 DAFVNP010000074.1 tpg gene 21135 21323 . - . ID=gene-L8R42_003585;Name=L8R42_003585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003585 DAFVNP010000074.1 Protein Homology CDS 21135 21323 . - 0 ID=cds-HBQ7391630.1;Parent=gene-L8R42_003585;Dbxref=NCBI_GP:HBQ7391630.1;Name=HBQ7391630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=L8R42_003585;product=hypothetical protein;protein_id=HBQ7391630.1;transl_table=11 DAFVNP010000074.1 tpg pseudogene 21359 21492 . + . ID=gene-L8R42_003586;Name=L8R42_003586;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003586;pseudo=true DAFVNP010000074.1 Protein Homology CDS 21359 21492 . + 0 ID=cds-L8R42_003586;Parent=gene-L8R42_003586;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001458895.1;locus_tag=L8R42_003586;product=transposase;pseudo=true;transl_table=11 DAFVNP010000074.1 tpg gene 22094 22711 . - . ID=gene-L8R42_003587;Name=L8R42_003587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003587 DAFVNP010000074.1 Protein Homology CDS 22094 22711 . - 0 ID=cds-HBQ7391631.1;Parent=gene-L8R42_003587;Dbxref=NCBI_GP:HBQ7391631.1;Name=HBQ7391631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539141.1;locus_tag=L8R42_003587;product=TioA protein;protein_id=HBQ7391631.1;transl_table=11 DAFVNP010000074.1 tpg gene 22851 23267 . - . ID=gene-L8R42_003588;Name=L8R42_003588;end_range=23267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003588;partial=true DAFVNP010000074.1 Protein Homology CDS 22851 23267 . - 0 ID=cds-HBQ7391632.1;Parent=gene-L8R42_003588;Dbxref=NCBI_GP:HBQ7391632.1;Name=HBQ7391632.1;end_range=23267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141548.1;locus_tag=L8R42_003588;partial=true;product=Lrp/AsnC family transcriptional regulator;protein_id=HBQ7391632.1;transl_table=11 ##sequence-region DAFVNP010000075.1 1 22738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000075.1 tpg region 1 22738 . + . ID=DAFVNP010000075.1:1..22738;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000075.1 tpg gene 208 1161 . - . ID=gene-L8R42_003589;Name=L8R42_003589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003589 DAFVNP010000075.1 Protein Homology CDS 208 1161 . - 0 ID=cds-HBQ7391633.1;Parent=gene-L8R42_003589;Dbxref=NCBI_GP:HBQ7391633.1;Name=HBQ7391633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000802150.1;locus_tag=L8R42_003589;product=replication protein;protein_id=HBQ7391633.1;transl_table=11 DAFVNP010000075.1 tpg gene 1148 1393 . - . ID=gene-L8R42_003590;Name=L8R42_003590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003590 DAFVNP010000075.1 Protein Homology CDS 1148 1393 . - 0 ID=cds-HBQ7391634.1;Parent=gene-L8R42_003590;Dbxref=NCBI_GP:HBQ7391634.1;Name=HBQ7391634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747907.1;locus_tag=L8R42_003590;product=helix-turn-helix domain-containing protein;protein_id=HBQ7391634.1;transl_table=11 DAFVNP010000075.1 tpg pseudogene 1526 3241 . - . ID=gene-L8R42_003591;Name=traN;gbkey=Gene;gene=traN;gene_biotype=pseudogene;locus_tag=L8R42_003591;pseudo=true DAFVNP010000075.1 Protein Homology CDS 1526 3241 . - 0 ID=cds-L8R42_003591;Parent=gene-L8R42_003591;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106055.1;locus_tag=L8R42_003591;product=conjugal transfer mating pair stabilization protein TraN;pseudo=true;transl_table=11 DAFVNP010000075.1 tpg gene 3250 4427 . - . ID=gene-L8R42_003592;Name=L8R42_003592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003592 DAFVNP010000075.1 Protein Homology CDS 4169 4427 . - 0 ID=cds-HBQ7391635.1;Parent=gene-L8R42_003592;Dbxref=NCBI_GP:HBQ7391635.1;Name=HBQ7391635.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=L8R42_003592;product=IS3-like element ISVch4 family transposase;protein_id=HBQ7391635.1;transl_table=11 DAFVNP010000075.1 Protein Homology CDS 3250 4169 . - 2 ID=cds-HBQ7391635.1;Parent=gene-L8R42_003592;Dbxref=NCBI_GP:HBQ7391635.1;Name=HBQ7391635.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=L8R42_003592;product=IS3-like element ISVch4 family transposase;protein_id=HBQ7391635.1;transl_table=11 DAFVNP010000075.1 tpg gene 4714 4968 . - . ID=gene-L8R42_003593;Name=L8R42_003593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003593 DAFVNP010000075.1 GeneMarkS-2+ CDS 4714 4968 . - 0 ID=cds-HBQ7391636.1;Parent=gene-L8R42_003593;Dbxref=NCBI_GP:HBQ7391636.1;Name=HBQ7391636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_003593;product=hypothetical protein;protein_id=HBQ7391636.1;transl_table=11 DAFVNP010000075.1 tpg gene 4968 8372 . - . ID=gene-L8R42_003594;Name=L8R42_003594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003594 DAFVNP010000075.1 Protein Homology CDS 4968 8372 . - 0 ID=cds-HBQ7391637.1;Parent=gene-L8R42_003594;Dbxref=NCBI_GP:HBQ7391637.1;Name=HBQ7391637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000347732.1;locus_tag=L8R42_003594;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=HBQ7391637.1;transl_table=11 DAFVNP010000075.1 tpg gene 8376 9800 . - . ID=gene-L8R42_003595;Name=L8R42_003595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003595 DAFVNP010000075.1 Protein Homology CDS 8376 9800 . - 0 ID=cds-HBQ7391638.1;Parent=gene-L8R42_003595;Dbxref=NCBI_GP:HBQ7391638.1;Name=HBQ7391638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011791303.1;locus_tag=L8R42_003595;product=conjugal transfer protein TraH;protein_id=HBQ7391638.1;transl_table=11 DAFVNP010000075.1 tpg gene 10044 10901 . + . ID=gene-L8R42_003596;Name=L8R42_003596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003596 DAFVNP010000075.1 Protein Homology CDS 10044 10901 . + 0 ID=cds-HBQ7391639.1;Parent=gene-L8R42_003596;Dbxref=NCBI_GP:HBQ7391639.1;Name=HBQ7391639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783473.1;locus_tag=L8R42_003596;product=hypothetical protein;protein_id=HBQ7391639.1;transl_table=11 DAFVNP010000075.1 tpg gene 10898 11293 . + . ID=gene-L8R42_003597;Name=L8R42_003597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003597 DAFVNP010000075.1 Protein Homology CDS 10898 11293 . + 0 ID=cds-HBQ7391640.1;Parent=gene-L8R42_003597;Dbxref=NCBI_GP:HBQ7391640.1;Name=HBQ7391640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747915.1;locus_tag=L8R42_003597;product=hypothetical protein;protein_id=HBQ7391640.1;transl_table=11 DAFVNP010000075.1 tpg gene 11708 11977 . - . ID=gene-L8R42_003598;Name=L8R42_003598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003598 DAFVNP010000075.1 Protein Homology CDS 11708 11977 . - 0 ID=cds-HBQ7391641.1;Parent=gene-L8R42_003598;Dbxref=NCBI_GP:HBQ7391641.1;Name=HBQ7391641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000901447.1;locus_tag=L8R42_003598;product=hypothetical protein;protein_id=HBQ7391641.1;transl_table=11 DAFVNP010000075.1 tpg gene 13126 14091 . - . ID=gene-L8R42_003599;Name=L8R42_003599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003599 DAFVNP010000075.1 Protein Homology CDS 13126 14091 . - 0 ID=cds-HBQ7391642.1;Parent=gene-L8R42_003599;Dbxref=NCBI_GP:HBQ7391642.1;Name=HBQ7391642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001255888.1;locus_tag=L8R42_003599;product=integrase domain-containing protein;protein_id=HBQ7391642.1;transl_table=11 DAFVNP010000075.1 tpg gene 15067 16728 . - . ID=gene-L8R42_003600;Name=L8R42_003600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003600 DAFVNP010000075.1 Protein Homology CDS 15067 16728 . - 0 ID=cds-HBQ7391643.1;Parent=gene-L8R42_003600;Dbxref=NCBI_GP:HBQ7391643.1;Name=HBQ7391643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434171.1;locus_tag=L8R42_003600;product=ATP-dependent helicase;protein_id=HBQ7391643.1;transl_table=11 DAFVNP010000075.1 tpg gene 16725 18650 . - . ID=gene-L8R42_003601;Name=L8R42_003601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003601 DAFVNP010000075.1 Protein Homology CDS 16725 18650 . - 0 ID=cds-HBQ7391644.1;Parent=gene-L8R42_003601;Dbxref=NCBI_GP:HBQ7391644.1;Name=HBQ7391644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000766277.1;locus_tag=L8R42_003601;product=AAA family ATPase;protein_id=HBQ7391644.1;transl_table=11 DAFVNP010000075.1 tpg gene 18728 21271 . - . ID=gene-L8R42_003602;Name=L8R42_003602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003602 DAFVNP010000075.1 Protein Homology CDS 18728 21271 . - 0 ID=cds-HBQ7391645.1;Parent=gene-L8R42_003602;Dbxref=NCBI_GP:HBQ7391645.1;Name=HBQ7391645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536280.1;locus_tag=L8R42_003602;product=S8 family peptidase;protein_id=HBQ7391645.1;transl_table=11 DAFVNP010000075.1 tpg gene 21292 22281 . - . ID=gene-L8R42_003603;Name=L8R42_003603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003603 DAFVNP010000075.1 Protein Homology CDS 21292 22281 . - 0 ID=cds-HBQ7391646.1;Parent=gene-L8R42_003603;Dbxref=NCBI_GP:HBQ7391646.1;Name=HBQ7391646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000179436.1;locus_tag=L8R42_003603;product=ATP-binding protein;protein_id=HBQ7391646.1;transl_table=11 DAFVNP010000075.1 tpg gene 22360 22738 . - . ID=gene-L8R42_003604;Name=L8R42_003604;end_range=22738,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003604;partial=true DAFVNP010000075.1 Protein Homology CDS 22360 22738 . - 1 ID=cds-HBQ7391647.1;Parent=gene-L8R42_003604;Dbxref=NCBI_GP:HBQ7391647.1;Name=HBQ7391647.1;end_range=22738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001685307.1;locus_tag=L8R42_003604;partial=true;product=recombinase family protein;protein_id=HBQ7391647.1;transl_table=11 ##sequence-region DAFVNP010000076.1 1 22674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000076.1 tpg region 1 22674 . + . ID=DAFVNP010000076.1:1..22674;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000076.1 tpg gene 182 258 . + . ID=gene-L8R42_003605;Name=L8R42_003605;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_003605 DAFVNP010000076.1 tRNAscan-SE tRNA 182 258 . + . ID=rna-L8R42_003605;Parent=gene-L8R42_003605;anticodon=(pos:216..218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003605;product=tRNA-Asp DAFVNP010000076.1 tRNAscan-SE exon 182 258 . + . ID=exon-L8R42_003605-1;Parent=rna-L8R42_003605;anticodon=(pos:216..218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003605;product=tRNA-Asp DAFVNP010000076.1 tpg gene 423 1226 . + . ID=gene-L8R42_003606;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=L8R42_003606 DAFVNP010000076.1 Protein Homology CDS 423 1226 . + 0 ID=cds-HBQ7391648.1;Parent=gene-L8R42_003606;Dbxref=NCBI_GP:HBQ7391648.1;Name=HBQ7391648.1;gbkey=CDS;gene=dkgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=L8R42_003606;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=HBQ7391648.1;transl_table=11 DAFVNP010000076.1 tpg gene 1247 2161 . - . ID=gene-L8R42_003607;Name=L8R42_003607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003607 DAFVNP010000076.1 Protein Homology CDS 1247 2161 . - 0 ID=cds-HBQ7391649.1;Parent=gene-L8R42_003607;Dbxref=NCBI_GP:HBQ7391649.1;Name=HBQ7391649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=L8R42_003607;product=LysR family transcriptional regulator;protein_id=HBQ7391649.1;transl_table=11 DAFVNP010000076.1 tpg gene 2266 3441 . + . ID=gene-L8R42_003608;Name=L8R42_003608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003608 DAFVNP010000076.1 Protein Homology CDS 2266 3441 . + 0 ID=cds-HBQ7391650.1;Parent=gene-L8R42_003608;Dbxref=NCBI_GP:HBQ7391650.1;Name=HBQ7391650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=L8R42_003608;product=MFS transporter;protein_id=HBQ7391650.1;transl_table=11 DAFVNP010000076.1 tpg gene 3573 4373 . + . ID=gene-L8R42_003609;Name=L8R42_003609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003609 DAFVNP010000076.1 Protein Homology CDS 3573 4373 . + 0 ID=cds-HBQ7391651.1;Parent=gene-L8R42_003609;Dbxref=NCBI_GP:HBQ7391651.1;Name=HBQ7391651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=L8R42_003609;product=endonuclease/exonuclease/phosphatase family protein;protein_id=HBQ7391651.1;transl_table=11 DAFVNP010000076.1 tpg gene 4451 5221 . + . ID=gene-L8R42_003610;Name=L8R42_003610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003610 DAFVNP010000076.1 Protein Homology CDS 4451 5221 . + 0 ID=cds-HBQ7391652.1;Parent=gene-L8R42_003610;Dbxref=NCBI_GP:HBQ7391652.1;Name=HBQ7391652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=L8R42_003610;product=class I SAM-dependent methyltransferase;protein_id=HBQ7391652.1;transl_table=11 DAFVNP010000076.1 tpg gene 5277 6644 . - . ID=gene-L8R42_003611;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=L8R42_003611 DAFVNP010000076.1 Protein Homology CDS 5277 6644 . - 0 ID=cds-HBQ7391653.1;Parent=gene-L8R42_003611;Dbxref=NCBI_GP:HBQ7391653.1;Name=HBQ7391653.1;gbkey=CDS;gene=mltD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=L8R42_003611;product=murein transglycosylase D;protein_id=HBQ7391653.1;transl_table=11 DAFVNP010000076.1 tpg gene 6716 7471 . - . ID=gene-L8R42_003612;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=L8R42_003612 DAFVNP010000076.1 Protein Homology CDS 6716 7471 . - 0 ID=cds-HBQ7391654.1;Parent=gene-L8R42_003612;Dbxref=NCBI_GP:HBQ7391654.1;Name=HBQ7391654.1;gbkey=CDS;gene=gloB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=L8R42_003612;product=hydroxyacylglutathione hydrolase;protein_id=HBQ7391654.1;transl_table=11 DAFVNP010000076.1 tpg gene 7506 8228 . + . ID=gene-L8R42_003613;Name=L8R42_003613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003613 DAFVNP010000076.1 Protein Homology CDS 7506 8228 . + 0 ID=cds-HBQ7391655.1;Parent=gene-L8R42_003613;Dbxref=NCBI_GP:HBQ7391655.1;Name=HBQ7391655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=L8R42_003613;product=class I SAM-dependent methyltransferase;protein_id=HBQ7391655.1;transl_table=11 DAFVNP010000076.1 tpg gene 8225 8692 . - . ID=gene-L8R42_003614;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=L8R42_003614 DAFVNP010000076.1 Protein Homology CDS 8225 8692 . - 0 ID=cds-HBQ7391656.1;Parent=gene-L8R42_003614;Dbxref=NCBI_GP:HBQ7391656.1;Name=HBQ7391656.1;gbkey=CDS;gene=rnhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=L8R42_003614;product=ribonuclease HI;protein_id=HBQ7391656.1;transl_table=11 DAFVNP010000076.1 tpg gene 8756 9487 . + . ID=gene-L8R42_003615;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=L8R42_003615 DAFVNP010000076.1 Protein Homology CDS 8756 9487 . + 0 ID=cds-HBQ7391657.1;Parent=gene-L8R42_003615;Dbxref=NCBI_GP:HBQ7391657.1;Name=HBQ7391657.1;gbkey=CDS;gene=dnaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=L8R42_003615;product=DNA polymerase III subunit epsilon;protein_id=HBQ7391657.1;transl_table=11 DAFVNP010000076.1 tpg gene 9621 9697 . + . ID=gene-L8R42_003616;Name=L8R42_003616;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_003616 DAFVNP010000076.1 tRNAscan-SE tRNA 9621 9697 . + . ID=rna-L8R42_003616;Parent=gene-L8R42_003616;anticodon=(pos:9655..9657);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003616;product=tRNA-Asp DAFVNP010000076.1 tRNAscan-SE exon 9621 9697 . + . ID=exon-L8R42_003616-1;Parent=rna-L8R42_003616;anticodon=(pos:9655..9657);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003616;product=tRNA-Asp DAFVNP010000076.1 tpg gene 10018 11073 . - . ID=gene-L8R42_003617;Name=L8R42_003617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003617 DAFVNP010000076.1 Protein Homology CDS 10018 11073 . - 0 ID=cds-HBQ7391658.1;Parent=gene-L8R42_003617;Dbxref=NCBI_GP:HBQ7391658.1;Name=HBQ7391658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=L8R42_003617;product=ImpA family type VI secretion system protein;protein_id=HBQ7391658.1;transl_table=11 DAFVNP010000076.1 tpg gene 11084 12079 . - . ID=gene-L8R42_003618;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=L8R42_003618 DAFVNP010000076.1 Protein Homology CDS 11084 12079 . - 0 ID=cds-HBQ7391659.1;Parent=gene-L8R42_003618;Dbxref=NCBI_GP:HBQ7391659.1;Name=HBQ7391659.1;gbkey=CDS;gene=tssG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=L8R42_003618;product=type VI secretion system baseplate subunit TssG;protein_id=HBQ7391659.1;transl_table=11 DAFVNP010000076.1 tpg gene 12076 13959 . - . ID=gene-L8R42_003619;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=L8R42_003619 DAFVNP010000076.1 Protein Homology CDS 12076 13959 . - 0 ID=cds-HBQ7391660.1;Parent=gene-L8R42_003619;Dbxref=NCBI_GP:HBQ7391660.1;Name=HBQ7391660.1;gbkey=CDS;gene=tssF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=L8R42_003619;product=type VI secretion system baseplate subunit TssF;protein_id=HBQ7391660.1;transl_table=11 DAFVNP010000076.1 tpg gene 13975 14469 . - . ID=gene-L8R42_003620;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=L8R42_003620 DAFVNP010000076.1 Protein Homology CDS 13975 14469 . - 0 ID=cds-HBQ7391661.1;Parent=gene-L8R42_003620;Dbxref=NCBI_GP:HBQ7391661.1;Name=HBQ7391661.1;gbkey=CDS;gene=tssE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=L8R42_003620;product=type VI secretion system baseplate subunit TssE;protein_id=HBQ7391661.1;transl_table=11 DAFVNP010000076.1 tpg gene 14466 15290 . - . ID=gene-L8R42_003621;Name=L8R42_003621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003621 DAFVNP010000076.1 Protein Homology CDS 14466 15290 . - 0 ID=cds-HBQ7391662.1;Parent=gene-L8R42_003621;Dbxref=NCBI_GP:HBQ7391662.1;Name=HBQ7391662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=L8R42_003621;product=impE family protein;protein_id=HBQ7391662.1;transl_table=11 DAFVNP010000076.1 tpg gene 15277 16179 . - . ID=gene-L8R42_003622;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=L8R42_003622 DAFVNP010000076.1 Protein Homology CDS 15277 16179 . - 0 ID=cds-HBQ7391663.1;Parent=gene-L8R42_003622;Dbxref=NCBI_GP:HBQ7391663.1;Name=HBQ7391663.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=L8R42_003622;product=type VI secretion system-associated protein TagK;protein_id=HBQ7391663.1;transl_table=11 DAFVNP010000076.1 tpg gene 16547 19186 . + . ID=gene-L8R42_003623;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=L8R42_003623 DAFVNP010000076.1 Protein Homology CDS 16547 19186 . + 0 ID=cds-HBQ7391664.1;Parent=gene-L8R42_003623;Dbxref=NCBI_GP:HBQ7391664.1;Name=HBQ7391664.1;gbkey=CDS;gene=tssH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=L8R42_003623;product=type VI secretion system ATPase TssH;protein_id=HBQ7391664.1;transl_table=11 DAFVNP010000076.1 tpg gene 19287 19829 . + . ID=gene-L8R42_003624;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=L8R42_003624 DAFVNP010000076.1 Protein Homology CDS 19287 19829 . + 0 ID=cds-HBQ7391665.1;Parent=gene-L8R42_003624;Dbxref=NCBI_GP:HBQ7391665.1;Name=HBQ7391665.1;gbkey=CDS;gene=tssB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=L8R42_003624;product=type VI secretion system contractile sheath small subunit;protein_id=HBQ7391665.1;transl_table=11 DAFVNP010000076.1 tpg gene 19853 21361 . + . ID=gene-L8R42_003625;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=L8R42_003625 DAFVNP010000076.1 Protein Homology CDS 19853 21361 . + 0 ID=cds-HBQ7391666.1;Parent=gene-L8R42_003625;Dbxref=NCBI_GP:HBQ7391666.1;Name=HBQ7391666.1;gbkey=CDS;gene=tssC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=L8R42_003625;product=type VI secretion system contractile sheath large subunit;protein_id=HBQ7391666.1;transl_table=11 DAFVNP010000076.1 tpg pseudogene 21427 21534 . + . ID=gene-L8R42_003626;Name=L8R42_003626;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003626;pseudo=true DAFVNP010000076.1 Protein Homology CDS 21427 21534 . + 0 ID=cds-L8R42_003626;Parent=gene-L8R42_003626;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323515.1;locus_tag=L8R42_003626;product=BPSL0067 family protein;pseudo=true;transl_table=11 DAFVNP010000076.1 tpg gene 21661 21993 . + . ID=gene-L8R42_003627;Name=L8R42_003627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003627 DAFVNP010000076.1 Protein Homology CDS 21661 21993 . + 0 ID=cds-HBQ7391667.1;Parent=gene-L8R42_003627;Dbxref=NCBI_GP:HBQ7391667.1;Name=HBQ7391667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459273.3;locus_tag=L8R42_003627;product=hypothetical protein;protein_id=HBQ7391667.1;transl_table=11 DAFVNP010000076.1 tpg gene 22247 22674 . + . ID=gene-L8R42_003628;Name=L8R42_003628;end_range=22674,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003628;partial=true DAFVNP010000076.1 Protein Homology CDS 22247 22674 . + 0 ID=cds-HBQ7391668.1;Parent=gene-L8R42_003628;Dbxref=NCBI_GP:HBQ7391668.1;Name=HBQ7391668.1;end_range=22674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=L8R42_003628;partial=true;product=type VI secretion system tube protein Hcp;protein_id=HBQ7391668.1;transl_table=11 ##sequence-region DAFVNP010000077.1 1 21517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000077.1 tpg region 1 21517 . + . ID=DAFVNP010000077.1:1..21517;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000077.1 tpg gene 204 875 . - . ID=gene-L8R42_003629;Name=L8R42_003629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003629 DAFVNP010000077.1 Protein Homology CDS 204 875 . - 0 ID=cds-HBQ7391669.1;Parent=gene-L8R42_003629;Dbxref=NCBI_GP:HBQ7391669.1;Name=HBQ7391669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=L8R42_003629;product=helix-turn-helix domain-containing protein;protein_id=HBQ7391669.1;transl_table=11 DAFVNP010000077.1 tpg gene 1260 1574 . - . ID=gene-L8R42_003630;Name=L8R42_003630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003630 DAFVNP010000077.1 Protein Homology CDS 1260 1574 . - 0 ID=cds-HBQ7391670.1;Parent=gene-L8R42_003630;Dbxref=NCBI_GP:HBQ7391670.1;Name=HBQ7391670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=L8R42_003630;product=hypothetical protein;protein_id=HBQ7391670.1;transl_table=11 DAFVNP010000077.1 tpg gene 1842 2558 . - . ID=gene-L8R42_003631;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=L8R42_003631 DAFVNP010000077.1 Protein Homology CDS 1842 2558 . - 0 ID=cds-HBQ7391671.1;Parent=gene-L8R42_003631;Dbxref=NCBI_GP:HBQ7391671.1;Name=HBQ7391671.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=L8R42_003631;product=two-component system response regulator ArcA;protein_id=HBQ7391671.1;transl_table=11 DAFVNP010000077.1 tpg gene 2654 2794 . + . ID=gene-L8R42_003632;Name=L8R42_003632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003632 DAFVNP010000077.1 Protein Homology CDS 2654 2794 . + 0 ID=cds-HBQ7391672.1;Parent=gene-L8R42_003632;Dbxref=NCBI_GP:HBQ7391672.1;Name=HBQ7391672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=L8R42_003632;product=hypothetical protein;protein_id=HBQ7391672.1;transl_table=11 DAFVNP010000077.1 tpg gene 3194 3880 . + . ID=gene-L8R42_003633;Name=L8R42_003633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003633 DAFVNP010000077.1 Protein Homology CDS 3194 3880 . + 0 ID=cds-HBQ7391673.1;Parent=gene-L8R42_003633;Dbxref=NCBI_GP:HBQ7391673.1;Name=HBQ7391673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=L8R42_003633;product=tRNA/rRNA methyltransferase;protein_id=HBQ7391673.1;transl_table=11 DAFVNP010000077.1 tpg gene 4094 4159 . + . ID=gene-L8R42_003634;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=L8R42_003634 DAFVNP010000077.1 Protein Homology CDS 4094 4159 . + 0 ID=cds-HBQ7391674.1;Parent=gene-L8R42_003634;Dbxref=NCBI_GP:HBQ7391674.1;Name=HBQ7391674.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=L8R42_003634;product=thr operon leader peptide;protein_id=HBQ7391674.1;transl_table=11 DAFVNP010000077.1 cmsearch sequence_feature 4095 4215 . + . ID=id-DAFVNP010000077.1:4095..4215;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 DAFVNP010000077.1 tpg gene 4241 6703 . + . ID=gene-L8R42_003635;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=L8R42_003635 DAFVNP010000077.1 Protein Homology CDS 4241 6703 . + 0 ID=cds-HBQ7391675.1;Parent=gene-L8R42_003635;Dbxref=NCBI_GP:HBQ7391675.1;Name=HBQ7391675.1;gbkey=CDS;gene=thrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=L8R42_003635;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=HBQ7391675.1;transl_table=11 DAFVNP010000077.1 tpg gene 6705 7634 . + . ID=gene-L8R42_003636;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=L8R42_003636 DAFVNP010000077.1 Protein Homology CDS 6705 7634 . + 0 ID=cds-HBQ7391676.1;Parent=gene-L8R42_003636;Dbxref=NCBI_GP:HBQ7391676.1;Name=HBQ7391676.1;gbkey=CDS;gene=thrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=L8R42_003636;product=homoserine kinase;protein_id=HBQ7391676.1;transl_table=11 DAFVNP010000077.1 tpg gene 7638 8924 . + . ID=gene-L8R42_003637;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=L8R42_003637 DAFVNP010000077.1 Protein Homology CDS 7638 8924 . + 0 ID=cds-HBQ7391677.1;Parent=gene-L8R42_003637;Dbxref=NCBI_GP:HBQ7391677.1;Name=HBQ7391677.1;gbkey=CDS;gene=thrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=L8R42_003637;product=threonine synthase;protein_id=HBQ7391677.1;transl_table=11 DAFVNP010000077.1 tpg gene 9018 9791 . - . ID=gene-L8R42_003638;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=L8R42_003638 DAFVNP010000077.1 Protein Homology CDS 9018 9791 . - 0 ID=cds-HBQ7391678.1;Parent=gene-L8R42_003638;Dbxref=NCBI_GP:HBQ7391678.1;Name=HBQ7391678.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=L8R42_003638;product=peroxide stress protein YaaA;protein_id=HBQ7391678.1;transl_table=11 DAFVNP010000077.1 tpg gene 9870 11300 . - . ID=gene-L8R42_003639;Name=L8R42_003639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003639 DAFVNP010000077.1 Protein Homology CDS 9870 11300 . - 0 ID=cds-HBQ7391679.1;Parent=gene-L8R42_003639;Dbxref=NCBI_GP:HBQ7391679.1;Name=HBQ7391679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=L8R42_003639;product=sodium:alanine symporter family protein;protein_id=HBQ7391679.1;transl_table=11 DAFVNP010000077.1 tpg gene 11569 12522 . + . ID=gene-L8R42_003640;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=L8R42_003640 DAFVNP010000077.1 Protein Homology CDS 11569 12522 . + 0 ID=cds-HBQ7391680.1;Parent=gene-L8R42_003640;Dbxref=NCBI_GP:HBQ7391680.1;Name=HBQ7391680.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=L8R42_003640;product=transaldolase;protein_id=HBQ7391680.1;transl_table=11 DAFVNP010000077.1 tpg gene 12633 13223 . + . ID=gene-L8R42_003641;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=L8R42_003641 DAFVNP010000077.1 Protein Homology CDS 12633 13223 . + 0 ID=cds-HBQ7391681.1;Parent=gene-L8R42_003641;Dbxref=NCBI_GP:HBQ7391681.1;Name=HBQ7391681.1;gbkey=CDS;gene=mog;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=L8R42_003641;product=molybdopterin adenylyltransferase;protein_id=HBQ7391681.1;transl_table=11 DAFVNP010000077.1 tpg gene 13280 13846 . - . ID=gene-L8R42_003642;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=L8R42_003642 DAFVNP010000077.1 Protein Homology CDS 13280 13846 . - 0 ID=cds-HBQ7391682.1;Parent=gene-L8R42_003642;Dbxref=NCBI_GP:HBQ7391682.1;Name=HBQ7391682.1;gbkey=CDS;gene=satP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=L8R42_003642;product=acetate uptake transporter;protein_id=HBQ7391682.1;transl_table=11 DAFVNP010000077.1 tpg gene 13996 14709 . - . ID=gene-L8R42_003643;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=L8R42_003643 DAFVNP010000077.1 Protein Homology CDS 13996 14709 . - 0 ID=cds-HBQ7391683.1;Parent=gene-L8R42_003643;Dbxref=NCBI_GP:HBQ7391683.1;Name=HBQ7391683.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=L8R42_003643;product=acidic protein MsyB;protein_id=HBQ7391683.1;transl_table=11 DAFVNP010000077.1 tpg gene 14745 15149 . - . ID=gene-L8R42_003644;Name=L8R42_003644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003644 DAFVNP010000077.1 Protein Homology CDS 14745 15149 . - 0 ID=cds-HBQ7391684.1;Parent=gene-L8R42_003644;Dbxref=NCBI_GP:HBQ7391684.1;Name=HBQ7391684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=L8R42_003644;product=DUF2541 family protein;protein_id=HBQ7391684.1;transl_table=11 DAFVNP010000077.1 tpg gene 15498 17414 . + . ID=gene-L8R42_003645;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=L8R42_003645 DAFVNP010000077.1 Protein Homology CDS 15498 17414 . + 0 ID=cds-HBQ7391685.1;Parent=gene-L8R42_003645;Dbxref=NCBI_GP:HBQ7391685.1;Name=HBQ7391685.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=L8R42_003645;product=molecular chaperone DnaK;protein_id=HBQ7391685.1;transl_table=11 DAFVNP010000077.1 tpg gene 17500 18639 . + . ID=gene-L8R42_003646;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=L8R42_003646 DAFVNP010000077.1 Protein Homology CDS 17500 18639 . + 0 ID=cds-HBQ7391686.1;Parent=gene-L8R42_003646;Dbxref=NCBI_GP:HBQ7391686.1;Name=HBQ7391686.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=L8R42_003646;product=molecular chaperone DnaJ;protein_id=HBQ7391686.1;transl_table=11 DAFVNP010000077.1 tpg gene 18920 19867 . + . ID=gene-L8R42_003647;Name=L8R42_003647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003647 DAFVNP010000077.1 Protein Homology CDS 18920 19867 . + 0 ID=cds-HBQ7391687.1;Parent=gene-L8R42_003647;Dbxref=NCBI_GP:HBQ7391687.1;Name=HBQ7391687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=L8R42_003647;product=LysR family transcriptional regulator;protein_id=HBQ7391687.1;transl_table=11 DAFVNP010000077.1 tpg gene 19994 20338 . + . ID=gene-L8R42_003648;Name=L8R42_003648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003648 DAFVNP010000077.1 Protein Homology CDS 19994 20338 . + 0 ID=cds-HBQ7391688.1;Parent=gene-L8R42_003648;Dbxref=NCBI_GP:HBQ7391688.1;Name=HBQ7391688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=L8R42_003648;product=phage holin family protein;protein_id=HBQ7391688.1;transl_table=11 DAFVNP010000077.1 tpg gene 20399 20932 . - . ID=gene-L8R42_003649;Name=L8R42_003649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003649 DAFVNP010000077.1 Protein Homology CDS 20399 20932 . - 0 ID=cds-HBQ7391689.1;Parent=gene-L8R42_003649;Dbxref=NCBI_GP:HBQ7391689.1;Name=HBQ7391689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=L8R42_003649;product=glycoside hydrolase family 108 protein;protein_id=HBQ7391689.1;transl_table=11 DAFVNP010000077.1 tpg gene 20949 21392 . - . ID=gene-L8R42_003650;Name=L8R42_003650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003650 DAFVNP010000077.1 Protein Homology CDS 20949 21392 . - 0 ID=cds-HBQ7391690.1;Parent=gene-L8R42_003650;Dbxref=NCBI_GP:HBQ7391690.1;Name=HBQ7391690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=L8R42_003650;product=transcriptional regulator;protein_id=HBQ7391690.1;transl_table=11 ##sequence-region DAFVNP010000078.1 1 21075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000078.1 tpg region 1 21075 . + . ID=DAFVNP010000078.1:1..21075;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000078.1 tpg gene 1 200 . - . ID=gene-L8R42_003651;Name=L8R42_003651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003651;partial=true;start_range=.,1 DAFVNP010000078.1 Protein Homology CDS 1 200 . - 0 ID=cds-HBQ7391691.1;Parent=gene-L8R42_003651;Dbxref=NCBI_GP:HBQ7391691.1;Name=HBQ7391691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441546.1;locus_tag=L8R42_003651;partial=true;product=hypothetical protein;protein_id=HBQ7391691.1;start_range=.,1;transl_table=11 DAFVNP010000078.1 tpg gene 275 1207 . + . ID=gene-L8R42_003652;Name=L8R42_003652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003652 DAFVNP010000078.1 Protein Homology CDS 275 1207 . + 0 ID=cds-HBQ7391692.1;Parent=gene-L8R42_003652;Dbxref=NCBI_GP:HBQ7391692.1;Name=HBQ7391692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716797.1;locus_tag=L8R42_003652;product=DUF4424 family protein;protein_id=HBQ7391692.1;transl_table=11 DAFVNP010000078.1 tpg gene 1222 1563 . - . ID=gene-L8R42_003653;Name=L8R42_003653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003653 DAFVNP010000078.1 Protein Homology CDS 1222 1563 . - 0 ID=cds-HBQ7391693.1;Parent=gene-L8R42_003653;Dbxref=NCBI_GP:HBQ7391693.1;Name=HBQ7391693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531931.1;locus_tag=L8R42_003653;product=hypothetical protein;protein_id=HBQ7391693.1;transl_table=11 DAFVNP010000078.1 tpg gene 1564 2652 . - . ID=gene-L8R42_003654;Name=L8R42_003654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003654 DAFVNP010000078.1 Protein Homology CDS 1564 2652 . - 0 ID=cds-HBQ7391694.1;Parent=gene-L8R42_003654;Dbxref=NCBI_GP:HBQ7391694.1;Name=HBQ7391694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001271160.1;locus_tag=L8R42_003654;product=DUF4431 domain-containing protein;protein_id=HBQ7391694.1;transl_table=11 DAFVNP010000078.1 tpg gene 2725 3696 . + . ID=gene-L8R42_003655;Name=L8R42_003655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003655 DAFVNP010000078.1 Protein Homology CDS 2725 3696 . + 0 ID=cds-HBQ7391695.1;Parent=gene-L8R42_003655;Dbxref=NCBI_GP:HBQ7391695.1;Name=HBQ7391695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220794.1;locus_tag=L8R42_003655;product=DUF4424 family protein;protein_id=HBQ7391695.1;transl_table=11 DAFVNP010000078.1 tpg gene 3728 6325 . - . ID=gene-L8R42_003656;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=L8R42_003656 DAFVNP010000078.1 Protein Homology CDS 3728 6325 . - 0 ID=cds-HBQ7391696.1;Parent=gene-L8R42_003656;Dbxref=NCBI_GP:HBQ7391696.1;Name=HBQ7391696.1;gbkey=CDS;gene=acnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=L8R42_003656;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=HBQ7391696.1;transl_table=11 DAFVNP010000078.1 tpg gene 6714 8336 . + . ID=gene-L8R42_003657;Name=L8R42_003657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003657 DAFVNP010000078.1 Protein Homology CDS 6714 8336 . + 0 ID=cds-HBQ7391697.1;Parent=gene-L8R42_003657;Dbxref=NCBI_GP:HBQ7391697.1;Name=HBQ7391697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=L8R42_003657;product=DUF3300 domain-containing protein;protein_id=HBQ7391697.1;transl_table=11 DAFVNP010000078.1 tpg gene 8349 9140 . + . ID=gene-L8R42_003658;Name=L8R42_003658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003658 DAFVNP010000078.1 Protein Homology CDS 8349 9140 . + 0 ID=cds-HBQ7391698.1;Parent=gene-L8R42_003658;Dbxref=NCBI_GP:HBQ7391698.1;Name=HBQ7391698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=L8R42_003658;product=DUF2950 family protein;protein_id=HBQ7391698.1;transl_table=11 DAFVNP010000078.1 tpg gene 9178 9462 . - . ID=gene-L8R42_003659;Name=L8R42_003659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003659 DAFVNP010000078.1 Protein Homology CDS 9178 9462 . - 0 ID=cds-HBQ7391699.1;Parent=gene-L8R42_003659;Dbxref=NCBI_GP:HBQ7391699.1;Name=HBQ7391699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=L8R42_003659;product=outer membrane protein;protein_id=HBQ7391699.1;transl_table=11 DAFVNP010000078.1 tpg gene 9751 11175 . - . ID=gene-L8R42_003660;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=L8R42_003660 DAFVNP010000078.1 Protein Homology CDS 9751 11175 . - 0 ID=cds-HBQ7391700.1;Parent=gene-L8R42_003660;Dbxref=NCBI_GP:HBQ7391700.1;Name=HBQ7391700.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=L8R42_003660;product=dihydrolipoyl dehydrogenase;protein_id=HBQ7391700.1;transl_table=11 DAFVNP010000078.1 tpg gene 11377 13266 . - . ID=gene-L8R42_003661;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=L8R42_003661 DAFVNP010000078.1 Protein Homology CDS 11377 13266 . - 0 ID=cds-HBQ7391701.1;Parent=gene-L8R42_003661;Dbxref=NCBI_GP:HBQ7391701.1;Name=HBQ7391701.1;gbkey=CDS;gene=aceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=L8R42_003661;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=HBQ7391701.1;transl_table=11 DAFVNP010000078.1 tpg gene 13281 15944 . - . ID=gene-L8R42_003662;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=L8R42_003662 DAFVNP010000078.1 Protein Homology CDS 13281 15944 . - 0 ID=cds-HBQ7391702.1;Parent=gene-L8R42_003662;Dbxref=NCBI_GP:HBQ7391702.1;Name=HBQ7391702.1;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=L8R42_003662;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=HBQ7391702.1;transl_table=11 DAFVNP010000078.1 tpg gene 16104 16868 . - . ID=gene-L8R42_003663;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=L8R42_003663 DAFVNP010000078.1 Protein Homology CDS 16104 16868 . - 0 ID=cds-HBQ7391703.1;Parent=gene-L8R42_003663;Dbxref=NCBI_GP:HBQ7391703.1;Name=HBQ7391703.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=L8R42_003663;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=HBQ7391703.1;transl_table=11 DAFVNP010000078.1 tpg gene 17431 18807 . + . ID=gene-L8R42_003664;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=L8R42_003664 DAFVNP010000078.1 Protein Homology CDS 17431 18807 . + 0 ID=cds-HBQ7391704.1;Parent=gene-L8R42_003664;Dbxref=NCBI_GP:HBQ7391704.1;Name=HBQ7391704.1;gbkey=CDS;gene=aroP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=L8R42_003664;product=aromatic amino acid transporter AroP;protein_id=HBQ7391704.1;transl_table=11 DAFVNP010000078.1 tpg pseudogene 18803 19033 . + . ID=gene-L8R42_003665;Name=L8R42_003665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003665;pseudo=true DAFVNP010000078.1 Protein Homology CDS 18803 19033 . + 0 ID=cds-L8R42_003665;Parent=gene-L8R42_003665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=L8R42_003665;product=aromatic amino acid transporter AroP;pseudo=true;transl_table=11 DAFVNP010000078.1 tpg gene 19197 20603 . + . ID=gene-L8R42_003666;Name=L8R42_003666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003666 DAFVNP010000078.1 Protein Homology CDS 19197 20603 . + 0 ID=cds-HBQ7391705.1;Parent=gene-L8R42_003666;Dbxref=NCBI_GP:HBQ7391705.1;Name=HBQ7391705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=L8R42_003666;product=MFS transporter;protein_id=HBQ7391705.1;transl_table=11 DAFVNP010000078.1 tpg gene 20603 21075 . + . ID=gene-L8R42_003667;Name=L8R42_003667;end_range=21075,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003667;partial=true DAFVNP010000078.1 Protein Homology CDS 20603 21075 . + 0 ID=cds-HBQ7391706.1;Parent=gene-L8R42_003667;Dbxref=NCBI_GP:HBQ7391706.1;Name=HBQ7391706.1;end_range=21075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=L8R42_003667;partial=true;product=family 43 glycosylhydrolase;protein_id=HBQ7391706.1;transl_table=11 ##sequence-region DAFVNP010000079.1 1 21055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000079.1 tpg region 1 21055 . + . ID=DAFVNP010000079.1:1..21055;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000079.1 tpg gene 1 3528 . - . ID=gene-L8R42_003668;Name=L8R42_003668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003668;partial=true;start_range=.,1 DAFVNP010000079.1 Protein Homology CDS 1 3528 . - 0 ID=cds-HBQ7391707.1;Parent=gene-L8R42_003668;Dbxref=NCBI_GP:HBQ7391707.1;Name=HBQ7391707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=L8R42_003668;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=HBQ7391707.1;start_range=.,1;transl_table=11 DAFVNP010000079.1 tpg gene 4137 5594 . - . ID=gene-L8R42_003669;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=L8R42_003669 DAFVNP010000079.1 Protein Homology CDS 4137 5594 . - 0 ID=cds-HBQ7391708.1;Parent=gene-L8R42_003669;Dbxref=NCBI_GP:HBQ7391708.1;Name=HBQ7391708.1;gbkey=CDS;gene=nuoN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=L8R42_003669;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=HBQ7391708.1;transl_table=11 DAFVNP010000079.1 tpg gene 5601 7130 . - . ID=gene-L8R42_003670;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=L8R42_003670 DAFVNP010000079.1 Protein Homology CDS 5601 7130 . - 0 ID=cds-HBQ7391709.1;Parent=gene-L8R42_003670;Dbxref=NCBI_GP:HBQ7391709.1;Name=HBQ7391709.1;gbkey=CDS;gene=nuoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=L8R42_003670;product=NADH-quinone oxidoreductase subunit M;protein_id=HBQ7391709.1;transl_table=11 DAFVNP010000079.1 tpg gene 7207 9048 . - . ID=gene-L8R42_003671;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=L8R42_003671 DAFVNP010000079.1 Protein Homology CDS 7207 9048 . - 0 ID=cds-HBQ7391710.1;Parent=gene-L8R42_003671;Dbxref=NCBI_GP:HBQ7391710.1;Name=HBQ7391710.1;gbkey=CDS;gene=nuoL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=L8R42_003671;product=NADH-quinone oxidoreductase subunit L;protein_id=HBQ7391710.1;transl_table=11 DAFVNP010000079.1 tpg gene 9045 9347 . - . ID=gene-L8R42_003672;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=L8R42_003672 DAFVNP010000079.1 Protein Homology CDS 9045 9347 . - 0 ID=cds-HBQ7391711.1;Parent=gene-L8R42_003672;Dbxref=NCBI_GP:HBQ7391711.1;Name=HBQ7391711.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=L8R42_003672;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=HBQ7391711.1;transl_table=11 DAFVNP010000079.1 tpg gene 9344 9898 . - . ID=gene-L8R42_003673;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=L8R42_003673 DAFVNP010000079.1 Protein Homology CDS 9344 9898 . - 0 ID=cds-HBQ7391712.1;Parent=gene-L8R42_003673;Dbxref=NCBI_GP:HBQ7391712.1;Name=HBQ7391712.1;gbkey=CDS;gene=nuoJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=L8R42_003673;product=NADH-quinone oxidoreductase subunit J;protein_id=HBQ7391712.1;transl_table=11 DAFVNP010000079.1 tpg gene 9909 10451 . - . ID=gene-L8R42_003674;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=L8R42_003674 DAFVNP010000079.1 Protein Homology CDS 9909 10451 . - 0 ID=cds-HBQ7391713.1;Parent=gene-L8R42_003674;Dbxref=NCBI_GP:HBQ7391713.1;Name=HBQ7391713.1;gbkey=CDS;gene=nuoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=L8R42_003674;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=HBQ7391713.1;transl_table=11 DAFVNP010000079.1 tpg gene 10466 11443 . - . ID=gene-L8R42_003675;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=L8R42_003675 DAFVNP010000079.1 Protein Homology CDS 10466 11443 . - 0 ID=cds-HBQ7391714.1;Parent=gene-L8R42_003675;Dbxref=NCBI_GP:HBQ7391714.1;Name=HBQ7391714.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=L8R42_003675;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=HBQ7391714.1;transl_table=11 DAFVNP010000079.1 tpg gene 11440 14166 . - . ID=gene-L8R42_003676;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=L8R42_003676 DAFVNP010000079.1 Protein Homology CDS 11440 14166 . - 0 ID=cds-HBQ7391715.1;Parent=gene-L8R42_003676;Dbxref=NCBI_GP:HBQ7391715.1;Name=HBQ7391715.1;gbkey=CDS;gene=nuoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=L8R42_003676;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=HBQ7391715.1;transl_table=11 DAFVNP010000079.1 tpg gene 14197 15534 . - . ID=gene-L8R42_003677;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=L8R42_003677 DAFVNP010000079.1 Protein Homology CDS 14197 15534 . - 0 ID=cds-HBQ7391716.1;Parent=gene-L8R42_003677;Dbxref=NCBI_GP:HBQ7391716.1;Name=HBQ7391716.1;gbkey=CDS;gene=nuoF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=L8R42_003677;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=HBQ7391716.1;transl_table=11 DAFVNP010000079.1 tpg gene 15531 16031 . - . ID=gene-L8R42_003678;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=L8R42_003678 DAFVNP010000079.1 Protein Homology CDS 15531 16031 . - 0 ID=cds-HBQ7391717.1;Parent=gene-L8R42_003678;Dbxref=NCBI_GP:HBQ7391717.1;Name=HBQ7391717.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=L8R42_003678;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=HBQ7391717.1;transl_table=11 DAFVNP010000079.1 tpg gene 16034 17836 . - . ID=gene-L8R42_003679;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=L8R42_003679 DAFVNP010000079.1 Protein Homology CDS 16034 17836 . - 0 ID=cds-HBQ7391718.1;Parent=gene-L8R42_003679;Dbxref=NCBI_GP:HBQ7391718.1;Name=HBQ7391718.1;gbkey=CDS;gene=nuoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=L8R42_003679;product=NADH-quinone oxidoreductase subunit C/D;protein_id=HBQ7391718.1;transl_table=11 DAFVNP010000079.1 tpg gene 17923 18585 . - . ID=gene-L8R42_003680;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=L8R42_003680 DAFVNP010000079.1 Protein Homology CDS 17923 18585 . - 0 ID=cds-HBQ7391719.1;Parent=gene-L8R42_003680;Dbxref=NCBI_GP:HBQ7391719.1;Name=HBQ7391719.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=L8R42_003680;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=HBQ7391719.1;transl_table=11 DAFVNP010000079.1 tpg gene 18601 19044 . - . ID=gene-L8R42_003681;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=L8R42_003681 DAFVNP010000079.1 Protein Homology CDS 18601 19044 . - 0 ID=cds-HBQ7391720.1;Parent=gene-L8R42_003681;Dbxref=NCBI_GP:HBQ7391720.1;Name=HBQ7391720.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=L8R42_003681;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=HBQ7391720.1;transl_table=11 DAFVNP010000079.1 tpg gene 19439 19591 . - . ID=gene-L8R42_003682;Name=L8R42_003682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003682 DAFVNP010000079.1 Protein Homology CDS 19439 19591 . - 0 ID=cds-HBQ7391721.1;Parent=gene-L8R42_003682;Dbxref=NCBI_GP:HBQ7391721.1;Name=HBQ7391721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=L8R42_003682;product=hypothetical protein;protein_id=HBQ7391721.1;transl_table=11 DAFVNP010000079.1 tpg gene 19671 20609 . - . ID=gene-L8R42_003683;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=L8R42_003683 DAFVNP010000079.1 Protein Homology CDS 19671 20609 . - 0 ID=cds-HBQ7391722.1;Parent=gene-L8R42_003683;Dbxref=NCBI_GP:HBQ7391722.1;Name=HBQ7391722.1;gbkey=CDS;gene=lrhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=L8R42_003683;product=transcriptional regulator LrhA;protein_id=HBQ7391722.1;transl_table=11 ##sequence-region DAFVNP010000080.1 1 21038 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000080.1 tpg region 1 21038 . + . ID=DAFVNP010000080.1:1..21038;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000080.1 tpg gene 21 842 . - . ID=gene-L8R42_003684;Name=L8R42_003684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003684 DAFVNP010000080.1 Protein Homology CDS 21 842 . - 0 ID=cds-HBQ7391723.1;Parent=gene-L8R42_003684;Dbxref=NCBI_GP:HBQ7391723.1;Name=HBQ7391723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=L8R42_003684;product=C40 family peptidase;protein_id=HBQ7391723.1;transl_table=11 DAFVNP010000080.1 tpg gene 1178 1525 . + . ID=gene-L8R42_003685;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=L8R42_003685 DAFVNP010000080.1 Protein Homology CDS 1178 1525 . + 0 ID=cds-HBQ7391724.1;Parent=gene-L8R42_003685;Dbxref=NCBI_GP:HBQ7391724.1;Name=HBQ7391724.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=L8R42_003685;product=monothiol glutaredoxin 4;protein_id=HBQ7391724.1;transl_table=11 DAFVNP010000080.1 tpg gene 1603 2250 . - . ID=gene-L8R42_003686;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=L8R42_003686 DAFVNP010000080.1 Protein Homology CDS 1603 2250 . - 0 ID=cds-HBQ7391725.1;Parent=gene-L8R42_003686;Dbxref=NCBI_GP:HBQ7391725.1;Name=HBQ7391725.1;gbkey=CDS;gene=rnt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=L8R42_003686;product=ribonuclease T;protein_id=HBQ7391725.1;transl_table=11 DAFVNP010000080.1 tpg gene 2351 2758 . - . ID=gene-L8R42_003687;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=L8R42_003687 DAFVNP010000080.1 Protein Homology CDS 2351 2758 . - 0 ID=cds-HBQ7391726.1;Parent=gene-L8R42_003687;Dbxref=NCBI_GP:HBQ7391726.1;Name=HBQ7391726.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=L8R42_003687;product=lactoylglutathione lyase;protein_id=HBQ7391726.1;transl_table=11 DAFVNP010000080.1 tpg gene 2827 3924 . - . ID=gene-L8R42_003688;Name=L8R42_003688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003688 DAFVNP010000080.1 Protein Homology CDS 2827 3924 . - 0 ID=cds-HBQ7391727.1;Parent=gene-L8R42_003688;Dbxref=NCBI_GP:HBQ7391727.1;Name=HBQ7391727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=L8R42_003688;product=alkene reductase;protein_id=HBQ7391727.1;transl_table=11 DAFVNP010000080.1 tpg gene 3983 4582 . - . ID=gene-L8R42_003689;Name=L8R42_003689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003689 DAFVNP010000080.1 Protein Homology CDS 3983 4582 . - 0 ID=cds-HBQ7391728.1;Parent=gene-L8R42_003689;Dbxref=NCBI_GP:HBQ7391728.1;Name=HBQ7391728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=L8R42_003689;product=TetR/AcrR family transcriptional regulator;protein_id=HBQ7391728.1;transl_table=11 DAFVNP010000080.1 tpg gene 4685 4924 . + . ID=gene-L8R42_003690;Name=L8R42_003690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003690 DAFVNP010000080.1 Protein Homology CDS 4685 4924 . + 0 ID=cds-HBQ7391729.1;Parent=gene-L8R42_003690;Dbxref=NCBI_GP:HBQ7391729.1;Name=HBQ7391729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=L8R42_003690;product=DUF1289 domain-containing protein;protein_id=HBQ7391729.1;transl_table=11 DAFVNP010000080.1 tpg gene 4975 5871 . + . ID=gene-L8R42_003691;Name=L8R42_003691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003691 DAFVNP010000080.1 Protein Homology CDS 4975 5871 . + 0 ID=cds-HBQ7391730.1;Parent=gene-L8R42_003691;Dbxref=NCBI_GP:HBQ7391730.1;Name=HBQ7391730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=L8R42_003691;product=aldo/keto reductase family oxidoreductase;protein_id=HBQ7391730.1;transl_table=11 DAFVNP010000080.1 tpg gene 5951 6472 . + . ID=gene-L8R42_003692;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=L8R42_003692 DAFVNP010000080.1 Protein Homology CDS 5951 6472 . + 0 ID=cds-HBQ7391731.1;Parent=gene-L8R42_003692;Dbxref=NCBI_GP:HBQ7391731.1;Name=HBQ7391731.1;gbkey=CDS;gene=sodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=L8R42_003692;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=HBQ7391731.1;transl_table=11 DAFVNP010000080.1 tpg gene 6448 8487 . - . ID=gene-L8R42_003693;Name=L8R42_003693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003693 DAFVNP010000080.1 Protein Homology CDS 6448 8487 . - 0 ID=cds-HBQ7391732.1;Parent=gene-L8R42_003693;Dbxref=NCBI_GP:HBQ7391732.1;Name=HBQ7391732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=L8R42_003693;product=FUSC family protein;protein_id=HBQ7391732.1;transl_table=11 DAFVNP010000080.1 tpg gene 8487 9347 . - . ID=gene-L8R42_003694;Name=L8R42_003694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003694 DAFVNP010000080.1 Protein Homology CDS 8487 9347 . - 0 ID=cds-HBQ7391733.1;Parent=gene-L8R42_003694;Dbxref=NCBI_GP:HBQ7391733.1;Name=HBQ7391733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=L8R42_003694;product=HlyD family secretion protein;protein_id=HBQ7391733.1;transl_table=11 DAFVNP010000080.1 tpg gene 9350 9586 . - . ID=gene-L8R42_003695;Name=L8R42_003695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003695 DAFVNP010000080.1 Protein Homology CDS 9350 9586 . - 0 ID=cds-HBQ7391734.1;Parent=gene-L8R42_003695;Dbxref=NCBI_GP:HBQ7391734.1;Name=HBQ7391734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=L8R42_003695;product=DUF1656 domain-containing protein;protein_id=HBQ7391734.1;transl_table=11 DAFVNP010000080.1 tpg gene 9781 10221 . + . ID=gene-L8R42_003696;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=L8R42_003696 DAFVNP010000080.1 Protein Homology CDS 9781 10221 . + 0 ID=cds-HBQ7391735.1;Parent=gene-L8R42_003696;Dbxref=NCBI_GP:HBQ7391735.1;Name=HBQ7391735.1;gbkey=CDS;gene=slyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=L8R42_003696;product=transcriptional regulator SlyA;protein_id=HBQ7391735.1;transl_table=11 DAFVNP010000080.1 tpg gene 10269 10736 . - . ID=gene-L8R42_003697;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=L8R42_003697 DAFVNP010000080.1 Protein Homology CDS 10269 10736 . - 0 ID=cds-HBQ7391736.1;Parent=gene-L8R42_003697;Dbxref=NCBI_GP:HBQ7391736.1;Name=HBQ7391736.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=L8R42_003697;product=outer membrane lipoprotein SlyB;protein_id=HBQ7391736.1;transl_table=11 DAFVNP010000080.1 tpg gene 11009 12130 . + . ID=gene-L8R42_003698;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=L8R42_003698 DAFVNP010000080.1 Protein Homology CDS 11009 12130 . + 0 ID=cds-HBQ7391737.1;Parent=gene-L8R42_003698;Dbxref=NCBI_GP:HBQ7391737.1;Name=HBQ7391737.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=L8R42_003698;product=anhydro-N-acetylmuramic acid kinase;protein_id=HBQ7391737.1;transl_table=11 DAFVNP010000080.1 tpg gene 12218 12547 . + . ID=gene-L8R42_003699;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=L8R42_003699 DAFVNP010000080.1 Protein Homology CDS 12218 12547 . + 0 ID=cds-HBQ7391738.1;Parent=gene-L8R42_003699;Dbxref=NCBI_GP:HBQ7391738.1;Name=HBQ7391738.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=L8R42_003699;product=C-type lysozyme inhibitor;protein_id=HBQ7391738.1;transl_table=11 DAFVNP010000080.1 tpg gene 12606 13262 . + . ID=gene-L8R42_003700;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=L8R42_003700 DAFVNP010000080.1 Protein Homology CDS 12606 13262 . + 0 ID=cds-HBQ7391739.1;Parent=gene-L8R42_003700;Dbxref=NCBI_GP:HBQ7391739.1;Name=HBQ7391739.1;gbkey=CDS;gene=pdxH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=L8R42_003700;product=pyridoxamine 5'-phosphate oxidase;protein_id=HBQ7391739.1;transl_table=11 DAFVNP010000080.1 tpg gene 13389 14663 . + . ID=gene-L8R42_003701;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=L8R42_003701 DAFVNP010000080.1 Protein Homology CDS 13389 14663 . + 0 ID=cds-HBQ7391740.1;Parent=gene-L8R42_003701;Dbxref=NCBI_GP:HBQ7391740.1;Name=HBQ7391740.1;gbkey=CDS;gene=tyrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=L8R42_003701;product=tyrosine--tRNA ligase;protein_id=HBQ7391740.1;transl_table=11 DAFVNP010000080.1 tpg gene 14723 15583 . + . ID=gene-L8R42_003702;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=L8R42_003702 DAFVNP010000080.1 Protein Homology CDS 14723 15583 . + 0 ID=cds-HBQ7391741.1;Parent=gene-L8R42_003702;Dbxref=NCBI_GP:HBQ7391741.1;Name=HBQ7391741.1;gbkey=CDS;gene=pdxY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=L8R42_003702;product=pyridoxal kinase PdxY;protein_id=HBQ7391741.1;transl_table=11 DAFVNP010000080.1 tpg gene 15642 16247 . - . ID=gene-L8R42_003703;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=L8R42_003703 DAFVNP010000080.1 Protein Homology CDS 15642 16247 . - 0 ID=cds-HBQ7391742.1;Parent=gene-L8R42_003703;Dbxref=NCBI_GP:HBQ7391742.1;Name=HBQ7391742.1;gbkey=CDS;gene=gstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=L8R42_003703;product=glutathione transferase GstA;protein_id=HBQ7391742.1;transl_table=11 DAFVNP010000080.1 tpg gene 16352 17857 . - . ID=gene-L8R42_003704;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=L8R42_003704 DAFVNP010000080.1 Protein Homology CDS 16352 17857 . - 0 ID=cds-HBQ7391743.1;Parent=gene-L8R42_003704;Dbxref=NCBI_GP:HBQ7391743.1;Name=HBQ7391743.1;gbkey=CDS;gene=dtpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=L8R42_003704;product=dipeptide/tripeptide permease DtpA;protein_id=HBQ7391743.1;transl_table=11 DAFVNP010000080.1 tpg gene 18459 19094 . - . ID=gene-L8R42_003705;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=L8R42_003705 DAFVNP010000080.1 Protein Homology CDS 18459 19094 . - 0 ID=cds-HBQ7391744.1;Parent=gene-L8R42_003705;Dbxref=NCBI_GP:HBQ7391744.1;Name=HBQ7391744.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=L8R42_003705;product=endonuclease III;protein_id=HBQ7391744.1;transl_table=11 DAFVNP010000080.1 tpg gene 19094 19786 . - . ID=gene-L8R42_003706;Name=L8R42_003706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003706 DAFVNP010000080.1 Protein Homology CDS 19094 19786 . - 0 ID=cds-HBQ7391745.1;Parent=gene-L8R42_003706;Dbxref=NCBI_GP:HBQ7391745.1;Name=HBQ7391745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=L8R42_003706;product=electron transport complex subunit E;protein_id=HBQ7391745.1;transl_table=11 DAFVNP010000080.1 tpg gene 19789 20409 . - . ID=gene-L8R42_003707;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=L8R42_003707 DAFVNP010000080.1 Protein Homology CDS 19789 20409 . - 0 ID=cds-HBQ7391746.1;Parent=gene-L8R42_003707;Dbxref=NCBI_GP:HBQ7391746.1;Name=HBQ7391746.1;gbkey=CDS;gene=rsxG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=L8R42_003707;product=electron transport complex subunit RsxG;protein_id=HBQ7391746.1;transl_table=11 DAFVNP010000080.1 tpg gene 20413 21038 . - . ID=gene-L8R42_003708;Name=L8R42_003708;end_range=21038,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003708;partial=true DAFVNP010000080.1 Protein Homology CDS 20413 21038 . - 2 ID=cds-HBQ7391747.1;Parent=gene-L8R42_003708;Dbxref=NCBI_GP:HBQ7391747.1;Name=HBQ7391747.1;end_range=21038,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=L8R42_003708;partial=true;product=RnfABCDGE type electron transport complex subunit D;protein_id=HBQ7391747.1;transl_table=11 ##sequence-region DAFVNP010000081.1 1 20655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000081.1 tpg region 1 20655 . + . ID=DAFVNP010000081.1:1..20655;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000081.1 tpg gene 142 936 . + . ID=gene-L8R42_003709;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=L8R42_003709 DAFVNP010000081.1 Protein Homology CDS 142 936 . + 0 ID=cds-HBQ7391748.1;Parent=gene-L8R42_003709;Dbxref=NCBI_GP:HBQ7391748.1;Name=HBQ7391748.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=L8R42_003709;product=propanediol diffusion facilitator PduF;protein_id=HBQ7391748.1;transl_table=11 DAFVNP010000081.1 tpg gene 1153 2064 . + . ID=gene-L8R42_003710;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=L8R42_003710 DAFVNP010000081.1 Protein Homology CDS 1153 2064 . + 0 ID=cds-HBQ7391749.1;Parent=gene-L8R42_003710;Dbxref=NCBI_GP:HBQ7391749.1;Name=HBQ7391749.1;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=L8R42_003710;product=regulatory protein PocR;protein_id=HBQ7391749.1;transl_table=11 DAFVNP010000081.1 cmsearch riboswitch 2390 2565 . + . ID=id-DAFVNP010000081.1:2390..2565;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch DAFVNP010000081.1 tpg gene 2662 4041 . + . ID=gene-L8R42_003711;Name=L8R42_003711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003711 DAFVNP010000081.1 Protein Homology CDS 2662 4041 . + 0 ID=cds-HBQ7391750.1;Parent=gene-L8R42_003711;Dbxref=NCBI_GP:HBQ7391750.1;Name=HBQ7391750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=L8R42_003711;product=cobyrinate a%2Cc-diamide synthase;protein_id=HBQ7391750.1;transl_table=11 DAFVNP010000081.1 tpg gene 4038 4997 . + . ID=gene-L8R42_003712;Name=L8R42_003712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003712 DAFVNP010000081.1 Protein Homology CDS 4038 4997 . + 0 ID=cds-HBQ7391751.1;Parent=gene-L8R42_003712;Dbxref=NCBI_GP:HBQ7391751.1;Name=HBQ7391751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=L8R42_003712;product=cobalamin biosynthesis protein;protein_id=HBQ7391751.1;transl_table=11 DAFVNP010000081.1 tpg gene 5008 5640 . + . ID=gene-L8R42_003713;Name=L8R42_003713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003713 DAFVNP010000081.1 Protein Homology CDS 5008 5640 . + 0 ID=cds-HBQ7391752.1;Parent=gene-L8R42_003713;Dbxref=NCBI_GP:HBQ7391752.1;Name=HBQ7391752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=L8R42_003713;product=cobalt-precorrin-8 methylmutase;protein_id=HBQ7391752.1;transl_table=11 DAFVNP010000081.1 tpg gene 5640 6779 . + . ID=gene-L8R42_003714;Name=L8R42_003714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003714 DAFVNP010000081.1 Protein Homology CDS 5640 6779 . + 0 ID=cds-HBQ7391753.1;Parent=gene-L8R42_003714;Dbxref=NCBI_GP:HBQ7391753.1;Name=HBQ7391753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=L8R42_003714;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=HBQ7391753.1;transl_table=11 DAFVNP010000081.1 tpg gene 6773 7378 . + . ID=gene-L8R42_003715;Name=L8R42_003715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003715 DAFVNP010000081.1 Protein Homology CDS 6773 7378 . + 0 ID=cds-HBQ7391754.1;Parent=gene-L8R42_003715;Dbxref=NCBI_GP:HBQ7391754.1;Name=HBQ7391754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=L8R42_003715;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=HBQ7391754.1;transl_table=11 DAFVNP010000081.1 tpg gene 7368 7946 . + . ID=gene-L8R42_003716;Name=L8R42_003716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003716 DAFVNP010000081.1 Protein Homology CDS 7368 7946 . + 0 ID=cds-HBQ7391755.1;Parent=gene-L8R42_003716;Dbxref=NCBI_GP:HBQ7391755.1;Name=HBQ7391755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=L8R42_003716;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=HBQ7391755.1;transl_table=11 DAFVNP010000081.1 tpg gene 7930 8703 . + . ID=gene-L8R42_003717;Name=L8R42_003717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003717 DAFVNP010000081.1 Protein Homology CDS 7930 8703 . + 0 ID=cds-HBQ7391756.1;Parent=gene-L8R42_003717;Dbxref=NCBI_GP:HBQ7391756.1;Name=HBQ7391756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=L8R42_003717;product=cobalt-precorrin-4 methyltransferase;protein_id=HBQ7391756.1;transl_table=11 DAFVNP010000081.1 tpg gene 8684 9739 . + . ID=gene-L8R42_003718;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=L8R42_003718 DAFVNP010000081.1 Protein Homology CDS 8684 9739 . + 0 ID=cds-HBQ7391757.1;Parent=gene-L8R42_003718;Dbxref=NCBI_GP:HBQ7391757.1;Name=HBQ7391757.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=L8R42_003718;product=cobalt-precorrin 5A hydrolase;protein_id=HBQ7391757.1;transl_table=11 DAFVNP010000081.1 tpg gene 9739 10464 . + . ID=gene-L8R42_003719;Name=L8R42_003719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003719 DAFVNP010000081.1 Protein Homology CDS 9739 10464 . + 0 ID=cds-HBQ7391758.1;Parent=gene-L8R42_003719;Dbxref=NCBI_GP:HBQ7391758.1;Name=HBQ7391758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=L8R42_003719;product=precorrin-3B C(17)-methyltransferase;protein_id=HBQ7391758.1;transl_table=11 DAFVNP010000081.1 tpg gene 10461 11252 . + . ID=gene-L8R42_003720;Name=L8R42_003720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003720 DAFVNP010000081.1 Protein Homology CDS 10461 11252 . + 0 ID=cds-HBQ7391759.1;Parent=gene-L8R42_003720;Dbxref=NCBI_GP:HBQ7391759.1;Name=HBQ7391759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=L8R42_003720;product=cobalt-precorrin-6A reductase;protein_id=HBQ7391759.1;transl_table=11 DAFVNP010000081.1 tpg gene 11255 12049 . + . ID=gene-L8R42_003721;Name=L8R42_003721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003721 DAFVNP010000081.1 Protein Homology CDS 11255 12049 . + 0 ID=cds-HBQ7391760.1;Parent=gene-L8R42_003721;Dbxref=NCBI_GP:HBQ7391760.1;Name=HBQ7391760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=L8R42_003721;product=sirohydrochlorin cobaltochelatase;protein_id=HBQ7391760.1;transl_table=11 DAFVNP010000081.1 tpg gene 12046 12759 . + . ID=gene-L8R42_003722;Name=L8R42_003722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003722 DAFVNP010000081.1 Protein Homology CDS 12046 12759 . + 0 ID=cds-HBQ7391761.1;Parent=gene-L8R42_003722;Dbxref=NCBI_GP:HBQ7391761.1;Name=HBQ7391761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=L8R42_003722;product=cobalt-factor II C(20)-methyltransferase;protein_id=HBQ7391761.1;transl_table=11 DAFVNP010000081.1 tpg gene 12756 13493 . + . ID=gene-L8R42_003723;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=L8R42_003723 DAFVNP010000081.1 Protein Homology CDS 12756 13493 . + 0 ID=cds-HBQ7391762.1;Parent=gene-L8R42_003723;Dbxref=NCBI_GP:HBQ7391762.1;Name=HBQ7391762.1;gbkey=CDS;gene=cbiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=L8R42_003723;product=cobalt ECF transporter S component CbiM;protein_id=HBQ7391762.1;transl_table=11 DAFVNP010000081.1 tpg gene 13495 13776 . + . ID=gene-L8R42_003724;Name=L8R42_003724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003724 DAFVNP010000081.1 Protein Homology CDS 13495 13776 . + 0 ID=cds-HBQ7391763.1;Parent=gene-L8R42_003724;Dbxref=NCBI_GP:HBQ7391763.1;Name=HBQ7391763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=L8R42_003724;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=HBQ7391763.1;transl_table=11 DAFVNP010000081.1 tpg gene 13763 14440 . + . ID=gene-L8R42_003725;Name=L8R42_003725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003725 DAFVNP010000081.1 Protein Homology CDS 13763 14440 . + 0 ID=cds-HBQ7391764.1;Parent=gene-L8R42_003725;Dbxref=NCBI_GP:HBQ7391764.1;Name=HBQ7391764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=L8R42_003725;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=HBQ7391764.1;transl_table=11 DAFVNP010000081.1 tpg gene 14449 15264 . + . ID=gene-L8R42_003726;Name=L8R42_003726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003726 DAFVNP010000081.1 Protein Homology CDS 14449 15264 . + 0 ID=cds-HBQ7391765.1;Parent=gene-L8R42_003726;Dbxref=NCBI_GP:HBQ7391765.1;Name=HBQ7391765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=L8R42_003726;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=HBQ7391765.1;transl_table=11 DAFVNP010000081.1 tpg gene 15261 16781 . + . ID=gene-L8R42_003727;Name=L8R42_003727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003727 DAFVNP010000081.1 Protein Homology CDS 15261 16781 . + 0 ID=cds-HBQ7391766.1;Parent=gene-L8R42_003727;Dbxref=NCBI_GP:HBQ7391766.1;Name=HBQ7391766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=L8R42_003727;product=cobyric acid synthase;protein_id=HBQ7391766.1;transl_table=11 DAFVNP010000081.1 tpg gene 16778 17323 . + . ID=gene-L8R42_003728;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=L8R42_003728 DAFVNP010000081.1 Protein Homology CDS 16778 17323 . + 0 ID=cds-HBQ7391767.1;Parent=gene-L8R42_003728;Dbxref=NCBI_GP:HBQ7391767.1;Name=HBQ7391767.1;gbkey=CDS;gene=cobU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=L8R42_003728;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=HBQ7391767.1;transl_table=11 DAFVNP010000081.1 tpg gene 17320 18063 . + . ID=gene-L8R42_003729;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=L8R42_003729 DAFVNP010000081.1 Protein Homology CDS 17320 18063 . + 0 ID=cds-HBQ7391768.1;Parent=gene-L8R42_003729;Dbxref=NCBI_GP:HBQ7391768.1;Name=HBQ7391768.1;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=L8R42_003729;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=HBQ7391768.1;transl_table=11 DAFVNP010000081.1 tpg gene 18090 19160 . + . ID=gene-L8R42_003730;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=L8R42_003730 DAFVNP010000081.1 Protein Homology CDS 18090 19160 . + 0 ID=cds-HBQ7391769.1;Parent=gene-L8R42_003730;Dbxref=NCBI_GP:HBQ7391769.1;Name=HBQ7391769.1;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=L8R42_003730;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=HBQ7391769.1;transl_table=11 DAFVNP010000081.1 tpg gene 19238 20167 . + . ID=gene-L8R42_003731;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=L8R42_003731 DAFVNP010000081.1 Protein Homology CDS 19238 20167 . + 0 ID=cds-HBQ7391770.1;Parent=gene-L8R42_003731;Dbxref=NCBI_GP:HBQ7391770.1;Name=HBQ7391770.1;gbkey=CDS;gene=ldtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=L8R42_003731;product=L%2CD-transpeptidase;protein_id=HBQ7391770.1;transl_table=11 ##sequence-region DAFVNP010000082.1 1 19845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000082.1 tpg region 1 19845 . + . ID=DAFVNP010000082.1:1..19845;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000082.1 tpg gene 1 1476 . - . ID=gene-L8R42_003732;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=L8R42_003732;partial=true;start_range=.,1 DAFVNP010000082.1 Protein Homology CDS 1 1476 . - 0 ID=cds-HBQ7391771.1;Parent=gene-L8R42_003732;Dbxref=NCBI_GP:HBQ7391771.1;Name=HBQ7391771.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460251.1;locus_tag=L8R42_003732;partial=true;product=protein kinase YeaG;protein_id=HBQ7391771.1;start_range=.,1;transl_table=11 DAFVNP010000082.1 tpg gene 1903 2649 . + . ID=gene-L8R42_003733;Name=L8R42_003733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003733 DAFVNP010000082.1 Protein Homology CDS 1903 2649 . + 0 ID=cds-HBQ7391772.1;Parent=gene-L8R42_003733;Dbxref=NCBI_GP:HBQ7391772.1;Name=HBQ7391772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=L8R42_003733;product=MipA/OmpV family protein;protein_id=HBQ7391772.1;transl_table=11 DAFVNP010000082.1 tpg pseudogene 2939 4123 . + . ID=gene-L8R42_003734;Name=L8R42_003734;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003734;pseudo=true DAFVNP010000082.1 Protein Homology CDS 2939 4123 . + 0 ID=cds-L8R42_003734;Parent=gene-L8R42_003734;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=L8R42_003734;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 DAFVNP010000082.1 tpg gene 4231 5088 . + . ID=gene-L8R42_003735;Name=L8R42_003735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003735 DAFVNP010000082.1 Protein Homology CDS 4231 5088 . + 0 ID=cds-HBQ7391773.1;Parent=gene-L8R42_003735;Dbxref=NCBI_GP:HBQ7391773.1;Name=HBQ7391773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=L8R42_003735;product=aldo/keto reductase;protein_id=HBQ7391773.1;transl_table=11 DAFVNP010000082.1 tpg gene 5187 6071 . - . ID=gene-L8R42_003736;Name=L8R42_003736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003736 DAFVNP010000082.1 Protein Homology CDS 5187 6071 . - 0 ID=cds-HBQ7391774.1;Parent=gene-L8R42_003736;Dbxref=NCBI_GP:HBQ7391774.1;Name=HBQ7391774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=L8R42_003736;product=D-hexose-6-phosphate mutarotase;protein_id=HBQ7391774.1;transl_table=11 DAFVNP010000082.1 tpg gene 6406 7401 . - . ID=gene-L8R42_003737;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=L8R42_003737 DAFVNP010000082.1 Protein Homology CDS 6406 7401 . - 0 ID=cds-HBQ7391775.1;Parent=gene-L8R42_003737;Dbxref=NCBI_GP:HBQ7391775.1;Name=HBQ7391775.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=L8R42_003737;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=HBQ7391775.1;transl_table=11 DAFVNP010000082.1 tpg gene 7743 8156 . + . ID=gene-L8R42_003738;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=L8R42_003738 DAFVNP010000082.1 Protein Homology CDS 7743 8156 . + 0 ID=cds-HBQ7391776.1;Parent=gene-L8R42_003738;Dbxref=NCBI_GP:HBQ7391776.1;Name=HBQ7391776.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=L8R42_003738;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=HBQ7391776.1;transl_table=11 DAFVNP010000082.1 tpg gene 8198 8476 . + . ID=gene-L8R42_003739;Name=L8R42_003739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003739 DAFVNP010000082.1 Protein Homology CDS 8198 8476 . + 0 ID=cds-HBQ7391777.1;Parent=gene-L8R42_003739;Dbxref=NCBI_GP:HBQ7391777.1;Name=HBQ7391777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=L8R42_003739;product=YeaC family protein;protein_id=HBQ7391777.1;transl_table=11 DAFVNP010000082.1 tpg gene 8826 9482 . - . ID=gene-L8R42_003740;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=L8R42_003740 DAFVNP010000082.1 Protein Homology CDS 8826 9482 . - 0 ID=cds-HBQ7391778.1;Parent=gene-L8R42_003740;Dbxref=NCBI_GP:HBQ7391778.1;Name=HBQ7391778.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=L8R42_003740;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=HBQ7391778.1;transl_table=11 DAFVNP010000082.1 tpg gene 9509 10525 . - . ID=gene-L8R42_003741;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=L8R42_003741 DAFVNP010000082.1 Protein Homology CDS 9509 10525 . - 0 ID=cds-HBQ7391779.1;Parent=gene-L8R42_003741;Dbxref=NCBI_GP:HBQ7391779.1;Name=HBQ7391779.1;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=L8R42_003741;product=asparaginase;protein_id=HBQ7391779.1;transl_table=11 DAFVNP010000082.1 tpg gene 10621 12477 . - . ID=gene-L8R42_003742;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=L8R42_003742 DAFVNP010000082.1 Protein Homology CDS 10621 12477 . - 0 ID=cds-HBQ7391780.1;Parent=gene-L8R42_003742;Dbxref=NCBI_GP:HBQ7391780.1;Name=HBQ7391780.1;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=L8R42_003742;product=signal peptide peptidase SppA;protein_id=HBQ7391780.1;transl_table=11 DAFVNP010000082.1 tpg gene 12651 13202 . + . ID=gene-L8R42_003743;Name=L8R42_003743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003743 DAFVNP010000082.1 Protein Homology CDS 12651 13202 . + 0 ID=cds-HBQ7391781.1;Parent=gene-L8R42_003743;Dbxref=NCBI_GP:HBQ7391781.1;Name=HBQ7391781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=L8R42_003743;product=NAD(P)H nitroreductase;protein_id=HBQ7391781.1;transl_table=11 DAFVNP010000082.1 tpg gene 13320 14363 . + . ID=gene-L8R42_003744;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=L8R42_003744 DAFVNP010000082.1 Protein Homology CDS 13320 14363 . + 0 ID=cds-HBQ7391782.1;Parent=gene-L8R42_003744;Dbxref=NCBI_GP:HBQ7391782.1;Name=HBQ7391782.1;gbkey=CDS;gene=selD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=L8R42_003744;product=selenide%2C water dikinase SelD;protein_id=HBQ7391782.1;transl_table=11 DAFVNP010000082.1 tpg gene 14368 16317 . + . ID=gene-L8R42_003745;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=L8R42_003745 DAFVNP010000082.1 Protein Homology CDS 14368 16317 . + 0 ID=cds-HBQ7391783.1;Parent=gene-L8R42_003745;Dbxref=NCBI_GP:HBQ7391783.1;Name=HBQ7391783.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=L8R42_003745;product=DNA topoisomerase III;protein_id=HBQ7391783.1;transl_table=11 DAFVNP010000082.1 tpg gene 16347 17690 . - . ID=gene-L8R42_003746;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=L8R42_003746 DAFVNP010000082.1 Protein Homology CDS 16347 17690 . - 0 ID=cds-HBQ7391784.1;Parent=gene-L8R42_003746;Dbxref=NCBI_GP:HBQ7391784.1;Name=HBQ7391784.1;gbkey=CDS;gene=gdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=L8R42_003746;product=NADP-specific glutamate dehydrogenase;protein_id=HBQ7391784.1;transl_table=11 DAFVNP010000082.1 tpg gene 17929 18204 . + . ID=gene-L8R42_003747;Name=L8R42_003747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003747 DAFVNP010000082.1 Protein Homology CDS 17929 18204 . + 0 ID=cds-HBQ7391785.1;Parent=gene-L8R42_003747;Dbxref=NCBI_GP:HBQ7391785.1;Name=HBQ7391785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=L8R42_003747;product=YnjH family protein;protein_id=HBQ7391785.1;transl_table=11 DAFVNP010000082.1 tpg gene 18164 18580 . - . ID=gene-L8R42_003748;Name=L8R42_003748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003748 DAFVNP010000082.1 Protein Homology CDS 18164 18580 . - 0 ID=cds-HBQ7391786.1;Parent=gene-L8R42_003748;Dbxref=NCBI_GP:HBQ7391786.1;Name=HBQ7391786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=L8R42_003748;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=HBQ7391786.1;transl_table=11 DAFVNP010000082.1 tpg gene 18653 19459 . - . ID=gene-L8R42_003749;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=L8R42_003749 DAFVNP010000082.1 Protein Homology CDS 18653 19459 . - 0 ID=cds-HBQ7391787.1;Parent=gene-L8R42_003749;Dbxref=NCBI_GP:HBQ7391787.1;Name=HBQ7391787.1;gbkey=CDS;gene=xthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=L8R42_003749;product=exodeoxyribonuclease III;protein_id=HBQ7391787.1;transl_table=11 ##sequence-region DAFVNP010000083.1 1 19620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000083.1 tpg region 1 19620 . + . ID=DAFVNP010000083.1:1..19620;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000083.1 tpg gene 18 848 . - . ID=gene-L8R42_003750;Name=L8R42_003750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003750 DAFVNP010000083.1 Protein Homology CDS 18 848 . - 0 ID=cds-HBQ7391788.1;Parent=gene-L8R42_003750;Dbxref=NCBI_GP:HBQ7391788.1;Name=HBQ7391788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=L8R42_003750;product=hypothetical protein;protein_id=HBQ7391788.1;transl_table=11 DAFVNP010000083.1 tpg gene 869 2851 . - . ID=gene-L8R42_003751;Name=L8R42_003751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003751 DAFVNP010000083.1 Protein Homology CDS 869 2851 . - 0 ID=cds-HBQ7391789.1;Parent=gene-L8R42_003751;Dbxref=NCBI_GP:HBQ7391789.1;Name=HBQ7391789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=L8R42_003751;product=two-partner secretion translocator ZirT;protein_id=HBQ7391789.1;transl_table=11 DAFVNP010000083.1 tpg gene 2926 3771 . - . ID=gene-L8R42_003752;Name=L8R42_003752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003752 DAFVNP010000083.1 Protein Homology CDS 2926 3771 . - 0 ID=cds-HBQ7391790.1;Parent=gene-L8R42_003752;Dbxref=NCBI_GP:HBQ7391790.1;Name=HBQ7391790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=L8R42_003752;product=hypothetical protein;protein_id=HBQ7391790.1;transl_table=11 DAFVNP010000083.1 tpg gene 4061 4918 . + . ID=gene-L8R42_003753;Name=L8R42_003753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003753 DAFVNP010000083.1 Protein Homology CDS 4061 4918 . + 0 ID=cds-HBQ7391791.1;Parent=gene-L8R42_003753;Dbxref=NCBI_GP:HBQ7391791.1;Name=HBQ7391791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=L8R42_003753;product=helix-turn-helix domain-containing protein;protein_id=HBQ7391791.1;transl_table=11 DAFVNP010000083.1 tpg gene 5309 6418 . + . ID=gene-L8R42_003754;Name=L8R42_003754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003754 DAFVNP010000083.1 Protein Homology CDS 5309 6418 . + 0 ID=cds-HBQ7391792.1;Parent=gene-L8R42_003754;Dbxref=NCBI_GP:HBQ7391792.1;Name=HBQ7391792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=L8R42_003754;product=hypothetical protein;protein_id=HBQ7391792.1;transl_table=11 DAFVNP010000083.1 tpg gene 6632 6868 . - . ID=gene-L8R42_003755;Name=L8R42_003755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003755 DAFVNP010000083.1 Protein Homology CDS 6632 6868 . - 0 ID=cds-HBQ7391793.1;Parent=gene-L8R42_003755;Dbxref=NCBI_GP:HBQ7391793.1;Name=HBQ7391793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=L8R42_003755;product=YgdI/YgdR family lipoprotein;protein_id=HBQ7391793.1;transl_table=11 DAFVNP010000083.1 tpg gene 6997 7587 . - . ID=gene-L8R42_003756;Name=L8R42_003756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003756 DAFVNP010000083.1 Protein Homology CDS 6997 7587 . - 0 ID=cds-HBQ7391794.1;Parent=gene-L8R42_003756;Dbxref=NCBI_GP:HBQ7391794.1;Name=HBQ7391794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=L8R42_003756;product=TetR/AcrR family transcriptional regulator;protein_id=HBQ7391794.1;transl_table=11 DAFVNP010000083.1 tpg gene 7665 8378 . + . ID=gene-L8R42_003757;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=L8R42_003757 DAFVNP010000083.1 Protein Homology CDS 7665 8378 . + 0 ID=cds-HBQ7391795.1;Parent=gene-L8R42_003757;Dbxref=NCBI_GP:HBQ7391795.1;Name=HBQ7391795.1;gbkey=CDS;gene=bdcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=L8R42_003757;product=SDR family oxidoreductase;protein_id=HBQ7391795.1;transl_table=11 DAFVNP010000083.1 tpg gene 8469 9338 . - . ID=gene-L8R42_003758;Name=L8R42_003758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003758 DAFVNP010000083.1 Protein Homology CDS 8469 9338 . - 0 ID=cds-HBQ7391796.1;Parent=gene-L8R42_003758;Dbxref=NCBI_GP:HBQ7391796.1;Name=HBQ7391796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=L8R42_003758;product=aldo/keto reductase;protein_id=HBQ7391796.1;transl_table=11 DAFVNP010000083.1 tpg gene 9615 10520 . - . ID=gene-L8R42_003759;Name=L8R42_003759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003759 DAFVNP010000083.1 Protein Homology CDS 9615 10520 . - 0 ID=cds-HBQ7391797.1;Parent=gene-L8R42_003759;Dbxref=NCBI_GP:HBQ7391797.1;Name=HBQ7391797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=L8R42_003759;product=LysR family transcriptional regulator;protein_id=HBQ7391797.1;transl_table=11 DAFVNP010000083.1 tpg gene 10638 11567 . + . ID=gene-L8R42_003760;Name=L8R42_003760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003760 DAFVNP010000083.1 Protein Homology CDS 10638 11567 . + 0 ID=cds-HBQ7391798.1;Parent=gene-L8R42_003760;Dbxref=NCBI_GP:HBQ7391798.1;Name=HBQ7391798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=L8R42_003760;product=aromatic alcohol reductase;protein_id=HBQ7391798.1;transl_table=11 DAFVNP010000083.1 tpg gene 12025 13227 . - . ID=gene-L8R42_003761;Name=L8R42_003761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003761 DAFVNP010000083.1 Protein Homology CDS 12025 13227 . - 0 ID=cds-HBQ7391799.1;Parent=gene-L8R42_003761;Dbxref=NCBI_GP:HBQ7391799.1;Name=HBQ7391799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727417.1;locus_tag=L8R42_003761;product=MFS transporter;protein_id=HBQ7391799.1;transl_table=11 DAFVNP010000083.1 tpg gene 13607 14383 . - . ID=gene-L8R42_003762;Name=L8R42_003762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003762 DAFVNP010000083.1 Protein Homology CDS 13607 14383 . - 0 ID=cds-HBQ7391800.1;Parent=gene-L8R42_003762;Dbxref=NCBI_GP:HBQ7391800.1;Name=HBQ7391800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712986.1;locus_tag=L8R42_003762;product=SDR family oxidoreductase;protein_id=HBQ7391800.1;transl_table=11 DAFVNP010000083.1 tpg gene 14563 15867 . - . ID=gene-L8R42_003763;Name=L8R42_003763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003763 DAFVNP010000083.1 Protein Homology CDS 14563 15867 . - 0 ID=cds-HBQ7391801.1;Parent=gene-L8R42_003763;Dbxref=NCBI_GP:HBQ7391801.1;Name=HBQ7391801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807034.1;locus_tag=L8R42_003763;product=transporter;protein_id=HBQ7391801.1;transl_table=11 DAFVNP010000083.1 tpg gene 16012 17199 . - . ID=gene-L8R42_003764;Name=L8R42_003764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003764 DAFVNP010000083.1 Protein Homology CDS 16012 17199 . - 0 ID=cds-HBQ7391802.1;Parent=gene-L8R42_003764;Dbxref=NCBI_GP:HBQ7391802.1;Name=HBQ7391802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704980.1;locus_tag=L8R42_003764;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=HBQ7391802.1;transl_table=11 DAFVNP010000083.1 tpg gene 17445 18224 . - . ID=gene-L8R42_003765;Name=L8R42_003765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003765 DAFVNP010000083.1 Protein Homology CDS 17445 18224 . - 0 ID=cds-HBQ7391803.1;Parent=gene-L8R42_003765;Dbxref=NCBI_GP:HBQ7391803.1;Name=HBQ7391803.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.1;locus_tag=L8R42_003765;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7391803.1;transl_table=11 DAFVNP010000083.1 tpg gene 18549 19472 . + . ID=gene-L8R42_003766;Name=L8R42_003766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003766 DAFVNP010000083.1 Protein Homology CDS 18549 19472 . + 0 ID=cds-HBQ7391804.1;Parent=gene-L8R42_003766;Dbxref=NCBI_GP:HBQ7391804.1;Name=HBQ7391804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257182.1;locus_tag=L8R42_003766;product=LysR family transcriptional regulator;protein_id=HBQ7391804.1;transl_table=11 ##sequence-region DAFVNP010000084.1 1 19578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000084.1 tpg region 1 19578 . + . ID=DAFVNP010000084.1:1..19578;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000084.1 tpg gene 1 1496 . - . ID=gene-L8R42_003767;Name=L8R42_003767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003767;partial=true;start_range=.,1 DAFVNP010000084.1 Protein Homology CDS 1 1496 . - 0 ID=cds-HBQ7391805.1;Parent=gene-L8R42_003767;Dbxref=NCBI_GP:HBQ7391805.1;Name=HBQ7391805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=L8R42_003767;partial=true;product=Lon protease family protein;protein_id=HBQ7391805.1;start_range=.,1;transl_table=11 DAFVNP010000084.1 tpg gene 1682 2134 . + . ID=gene-L8R42_003768;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=L8R42_003768 DAFVNP010000084.1 Protein Homology CDS 1682 2134 . + 0 ID=cds-HBQ7391806.1;Parent=gene-L8R42_003768;Dbxref=NCBI_GP:HBQ7391806.1;Name=HBQ7391806.1;gbkey=CDS;gene=matP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=L8R42_003768;product=macrodomain Ter protein MatP;protein_id=HBQ7391806.1;transl_table=11 DAFVNP010000084.1 tpg gene 2206 3258 . - . ID=gene-L8R42_003769;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=L8R42_003769 DAFVNP010000084.1 Protein Homology CDS 2206 3258 . - 0 ID=cds-HBQ7391807.1;Parent=gene-L8R42_003769;Dbxref=NCBI_GP:HBQ7391807.1;Name=HBQ7391807.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=L8R42_003769;product=porin OmpA;protein_id=HBQ7391807.1;transl_table=11 DAFVNP010000084.1 tpg gene 3615 4124 . - . ID=gene-L8R42_003770;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=L8R42_003770 DAFVNP010000084.1 Protein Homology CDS 3615 4124 . - 0 ID=cds-HBQ7391808.1;Parent=gene-L8R42_003770;Dbxref=NCBI_GP:HBQ7391808.1;Name=HBQ7391808.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=L8R42_003770;product=cell division inhibitor SulA;protein_id=HBQ7391808.1;transl_table=11 DAFVNP010000084.1 tpg gene 4341 4946 . + . ID=gene-L8R42_003771;Name=L8R42_003771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003771 DAFVNP010000084.1 Protein Homology CDS 4341 4946 . + 0 ID=cds-HBQ7391809.1;Parent=gene-L8R42_003771;Dbxref=NCBI_GP:HBQ7391809.1;Name=HBQ7391809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=L8R42_003771;product=TfoX/Sxy family DNA transformation protein;protein_id=HBQ7391809.1;transl_table=11 DAFVNP010000084.1 tpg gene 4933 7086 . - . ID=gene-L8R42_003772;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=L8R42_003772 DAFVNP010000084.1 Protein Homology CDS 4933 7086 . - 0 ID=cds-HBQ7391810.1;Parent=gene-L8R42_003772;Dbxref=NCBI_GP:HBQ7391810.1;Name=HBQ7391810.1;gbkey=CDS;gene=yccS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=L8R42_003772;product=TIGR01666 family membrane protein;protein_id=HBQ7391810.1;transl_table=11 DAFVNP010000084.1 tpg gene 7105 7551 . - . ID=gene-L8R42_003773;Name=L8R42_003773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003773 DAFVNP010000084.1 Protein Homology CDS 7105 7551 . - 0 ID=cds-HBQ7391811.1;Parent=gene-L8R42_003773;Dbxref=NCBI_GP:HBQ7391811.1;Name=HBQ7391811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=L8R42_003773;product=YccF domain-containing protein;protein_id=HBQ7391811.1;transl_table=11 DAFVNP010000084.1 tpg gene 7675 9729 . + . ID=gene-L8R42_003774;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=L8R42_003774 DAFVNP010000084.1 Protein Homology CDS 7675 9729 . + 0 ID=cds-HBQ7391812.1;Parent=gene-L8R42_003774;Dbxref=NCBI_GP:HBQ7391812.1;Name=HBQ7391812.1;gbkey=CDS;gene=helD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=L8R42_003774;product=DNA helicase IV;protein_id=HBQ7391812.1;transl_table=11 DAFVNP010000084.1 tpg gene 9765 10223 . - . ID=gene-L8R42_003775;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=L8R42_003775 DAFVNP010000084.1 Protein Homology CDS 9765 10223 . - 0 ID=cds-HBQ7391813.1;Parent=gene-L8R42_003775;Dbxref=NCBI_GP:HBQ7391813.1;Name=HBQ7391813.1;gbkey=CDS;gene=mgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=L8R42_003775;product=methylglyoxal synthase;protein_id=HBQ7391813.1;transl_table=11 DAFVNP010000084.1 tpg gene 10318 10980 . - . ID=gene-L8R42_003776;Name=L8R42_003776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003776 DAFVNP010000084.1 Protein Homology CDS 10318 10980 . - 0 ID=cds-HBQ7391814.1;Parent=gene-L8R42_003776;Dbxref=NCBI_GP:HBQ7391814.1;Name=HBQ7391814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=L8R42_003776;product=DUF2057 family protein;protein_id=HBQ7391814.1;transl_table=11 DAFVNP010000084.1 tpg gene 11154 11567 . + . ID=gene-L8R42_003777;Name=L8R42_003777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003777 DAFVNP010000084.1 Protein Homology CDS 11154 11567 . + 0 ID=cds-HBQ7391815.1;Parent=gene-L8R42_003777;Dbxref=NCBI_GP:HBQ7391815.1;Name=HBQ7391815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=L8R42_003777;product=CoA-binding protein;protein_id=HBQ7391815.1;transl_table=11 DAFVNP010000084.1 tpg gene 11612 11929 . - . ID=gene-L8R42_003778;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=L8R42_003778 DAFVNP010000084.1 Protein Homology CDS 11612 11929 . - 0 ID=cds-HBQ7391816.1;Parent=gene-L8R42_003778;Dbxref=NCBI_GP:HBQ7391816.1;Name=HBQ7391816.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=L8R42_003778;product=heat shock protein HspQ;protein_id=HBQ7391816.1;transl_table=11 DAFVNP010000084.1 tpg gene 11987 13198 . - . ID=gene-L8R42_003779;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=L8R42_003779 DAFVNP010000084.1 Protein Homology CDS 11987 13198 . - 0 ID=cds-HBQ7391817.1;Parent=gene-L8R42_003779;Dbxref=NCBI_GP:HBQ7391817.1;Name=HBQ7391817.1;gbkey=CDS;gene=rlmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=L8R42_003779;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=HBQ7391817.1;transl_table=11 DAFVNP010000084.1 tpg gene 13413 13961 . + . ID=gene-L8R42_003780;Name=L8R42_003780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003780 DAFVNP010000084.1 Protein Homology CDS 13413 13961 . + 0 ID=cds-HBQ7391818.1;Parent=gene-L8R42_003780;Dbxref=NCBI_GP:HBQ7391818.1;Name=HBQ7391818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=L8R42_003780;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=HBQ7391818.1;transl_table=11 DAFVNP010000084.1 tpg gene 13987 14766 . + . ID=gene-L8R42_003781;Name=L8R42_003781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003781 DAFVNP010000084.1 Protein Homology CDS 13987 14766 . + 0 ID=cds-HBQ7391819.1;Parent=gene-L8R42_003781;Dbxref=NCBI_GP:HBQ7391819.1;Name=HBQ7391819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=L8R42_003781;product=helix-turn-helix domain-containing protein;protein_id=HBQ7391819.1;transl_table=11 DAFVNP010000084.1 tpg gene 14815 15096 . + . ID=gene-L8R42_003782;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=L8R42_003782 DAFVNP010000084.1 Protein Homology CDS 14815 15096 . + 0 ID=cds-HBQ7391820.1;Parent=gene-L8R42_003782;Dbxref=NCBI_GP:HBQ7391820.1;Name=HBQ7391820.1;gbkey=CDS;gene=yccX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=L8R42_003782;product=acylphosphatase;protein_id=HBQ7391820.1;transl_table=11 DAFVNP010000084.1 tpg gene 15093 15422 . - . ID=gene-L8R42_003783;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=L8R42_003783 DAFVNP010000084.1 Protein Homology CDS 15093 15422 . - 0 ID=cds-HBQ7391821.1;Parent=gene-L8R42_003783;Dbxref=NCBI_GP:HBQ7391821.1;Name=HBQ7391821.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=L8R42_003783;product=sulfurtransferase TusE;protein_id=HBQ7391821.1;transl_table=11 DAFVNP010000084.1 tpg gene 15509 16168 . - . ID=gene-L8R42_003784;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=L8R42_003784 DAFVNP010000084.1 Protein Homology CDS 15509 16168 . - 0 ID=cds-HBQ7391822.1;Parent=gene-L8R42_003784;Dbxref=NCBI_GP:HBQ7391822.1;Name=HBQ7391822.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=L8R42_003784;product=FtsH protease modulator YccA;protein_id=HBQ7391822.1;transl_table=11 DAFVNP010000084.1 tpg gene 16567 16654 . + . ID=gene-L8R42_003785;Name=L8R42_003785;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_003785 DAFVNP010000084.1 tRNAscan-SE tRNA 16567 16654 . + . ID=rna-L8R42_003785;Parent=gene-L8R42_003785;anticodon=(pos:16601..16603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003785;product=tRNA-Ser DAFVNP010000084.1 tRNAscan-SE exon 16567 16654 . + . ID=exon-L8R42_003785-1;Parent=rna-L8R42_003785;anticodon=(pos:16601..16603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003785;product=tRNA-Ser DAFVNP010000084.1 tpg gene 17116 17604 . + . ID=gene-L8R42_003786;Name=L8R42_003786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003786 DAFVNP010000084.1 Protein Homology CDS 17116 17604 . + 0 ID=cds-HBQ7391823.1;Parent=gene-L8R42_003786;Dbxref=NCBI_GP:HBQ7391823.1;Name=HBQ7391823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224749.1;locus_tag=L8R42_003786;product=ImmA/IrrE family metallo-endopeptidase;protein_id=HBQ7391823.1;transl_table=11 DAFVNP010000084.1 tpg gene 17614 18093 . + . ID=gene-L8R42_003787;Name=L8R42_003787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003787 DAFVNP010000084.1 GeneMarkS-2+ CDS 17614 18093 . + 0 ID=cds-HBQ7391824.1;Parent=gene-L8R42_003787;Dbxref=NCBI_GP:HBQ7391824.1;Name=HBQ7391824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_003787;product=hypothetical protein;protein_id=HBQ7391824.1;transl_table=11 DAFVNP010000084.1 tpg gene 18133 18660 . - . ID=gene-L8R42_003788;Name=L8R42_003788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003788 DAFVNP010000084.1 Protein Homology CDS 18133 18660 . - 0 ID=cds-HBQ7391825.1;Parent=gene-L8R42_003788;Dbxref=NCBI_GP:HBQ7391825.1;Name=HBQ7391825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209390.1;locus_tag=L8R42_003788;product=tyrosine-type recombinase/integrase;protein_id=HBQ7391825.1;transl_table=11 DAFVNP010000084.1 tpg gene 18917 19573 . - . ID=gene-L8R42_003789;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=L8R42_003789 DAFVNP010000084.1 Protein Homology CDS 18917 19573 . - 0 ID=cds-HBQ7391826.1;Parent=gene-L8R42_003789;Dbxref=NCBI_GP:HBQ7391826.1;Name=HBQ7391826.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002953404.1;locus_tag=L8R42_003789;product=type III secretion system effector protease PipA;protein_id=HBQ7391826.1;transl_table=11 ##sequence-region DAFVNP010000085.1 1 19486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000085.1 tpg region 1 19486 . + . ID=DAFVNP010000085.1:1..19486;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000085.1 tpg gene 1 714 . - . ID=gene-L8R42_003790;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=L8R42_003790;partial=true;start_range=.,1 DAFVNP010000085.1 Protein Homology CDS 1 714 . - 0 ID=cds-HBQ7391827.1;Parent=gene-L8R42_003790;Dbxref=NCBI_GP:HBQ7391827.1;Name=HBQ7391827.1;gbkey=CDS;gene=rfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=L8R42_003790;partial=true;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=HBQ7391827.1;start_range=.,1;transl_table=11 DAFVNP010000085.1 tpg gene 707 1831 . - . ID=gene-L8R42_003791;Name=L8R42_003791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003791 DAFVNP010000085.1 Protein Homology CDS 707 1831 . - 0 ID=cds-HBQ7391828.1;Parent=gene-L8R42_003791;Dbxref=NCBI_GP:HBQ7391828.1;Name=HBQ7391828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=L8R42_003791;product=glycosyltransferase family 4 protein;protein_id=HBQ7391828.1;transl_table=11 DAFVNP010000085.1 tpg gene 1828 2898 . - . ID=gene-L8R42_003792;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=L8R42_003792 DAFVNP010000085.1 Protein Homology CDS 1828 2898 . - 0 ID=cds-HBQ7391829.1;Parent=gene-L8R42_003792;Dbxref=NCBI_GP:HBQ7391829.1;Name=HBQ7391829.1;gbkey=CDS;gene=rfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=L8R42_003792;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=HBQ7391829.1;transl_table=11 DAFVNP010000085.1 tpg gene 3307 4584 . + . ID=gene-L8R42_003793;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=L8R42_003793 DAFVNP010000085.1 Protein Homology CDS 3307 4584 . + 0 ID=cds-HBQ7391830.1;Parent=gene-L8R42_003793;Dbxref=NCBI_GP:HBQ7391830.1;Name=HBQ7391830.1;gbkey=CDS;gene=waaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=L8R42_003793;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=HBQ7391830.1;transl_table=11 DAFVNP010000085.1 tpg gene 4593 5072 . + . ID=gene-L8R42_003794;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=L8R42_003794 DAFVNP010000085.1 Protein Homology CDS 4593 5072 . + 0 ID=cds-HBQ7391831.1;Parent=gene-L8R42_003794;Dbxref=NCBI_GP:HBQ7391831.1;Name=HBQ7391831.1;gbkey=CDS;gene=coaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=L8R42_003794;product=pantetheine-phosphate adenylyltransferase;protein_id=HBQ7391831.1;transl_table=11 DAFVNP010000085.1 tpg gene 5096 5905 . - . ID=gene-L8R42_003795;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=L8R42_003795 DAFVNP010000085.1 Protein Homology CDS 5096 5905 . - 0 ID=cds-HBQ7391832.1;Parent=gene-L8R42_003795;Dbxref=NCBI_GP:HBQ7391832.1;Name=HBQ7391832.1;gbkey=CDS;gene=mutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=L8R42_003795;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=HBQ7391832.1;transl_table=11 DAFVNP010000085.1 tpg gene 6003 6170 . - . ID=gene-L8R42_003796;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=L8R42_003796 DAFVNP010000085.1 Protein Homology CDS 6003 6170 . - 0 ID=cds-HBQ7391833.1;Parent=gene-L8R42_003796;Dbxref=NCBI_GP:HBQ7391833.1;Name=HBQ7391833.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=L8R42_003796;product=50S ribosomal protein L33;protein_id=HBQ7391833.1;transl_table=11 DAFVNP010000085.1 tpg gene 6191 6427 . - . ID=gene-L8R42_003797;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=L8R42_003797 DAFVNP010000085.1 Protein Homology CDS 6191 6427 . - 0 ID=cds-HBQ7391834.1;Parent=gene-L8R42_003797;Dbxref=NCBI_GP:HBQ7391834.1;Name=HBQ7391834.1;gbkey=CDS;gene=rpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=L8R42_003797;product=50S ribosomal protein L28;protein_id=HBQ7391834.1;transl_table=11 DAFVNP010000085.1 tpg gene 6645 7310 . - . ID=gene-L8R42_003798;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=L8R42_003798 DAFVNP010000085.1 Protein Homology CDS 6645 7310 . - 0 ID=cds-HBQ7391835.1;Parent=gene-L8R42_003798;Dbxref=NCBI_GP:HBQ7391835.1;Name=HBQ7391835.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=L8R42_003798;product=DNA repair protein RadC;protein_id=HBQ7391835.1;transl_table=11 DAFVNP010000085.1 tpg gene 7486 8706 . + . ID=gene-L8R42_003799;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=L8R42_003799 DAFVNP010000085.1 Protein Homology CDS 7486 8706 . + 0 ID=cds-HBQ7391836.1;Parent=gene-L8R42_003799;Dbxref=NCBI_GP:HBQ7391836.1;Name=HBQ7391836.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=L8R42_003799;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=HBQ7391836.1;transl_table=11 DAFVNP010000085.1 tpg gene 8684 9142 . + . ID=gene-L8R42_003800;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=L8R42_003800 DAFVNP010000085.1 Protein Homology CDS 8684 9142 . + 0 ID=cds-HBQ7391837.1;Parent=gene-L8R42_003800;Dbxref=NCBI_GP:HBQ7391837.1;Name=HBQ7391837.1;gbkey=CDS;gene=dut;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=L8R42_003800;product=dUTP diphosphatase;protein_id=HBQ7391837.1;transl_table=11 DAFVNP010000085.1 tpg gene 9250 9846 . + . ID=gene-L8R42_003801;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=L8R42_003801 DAFVNP010000085.1 Protein Homology CDS 9250 9846 . + 0 ID=cds-HBQ7391838.1;Parent=gene-L8R42_003801;Dbxref=NCBI_GP:HBQ7391838.1;Name=HBQ7391838.1;gbkey=CDS;gene=slmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=L8R42_003801;product=nucleoid occlusion factor SlmA;protein_id=HBQ7391838.1;transl_table=11 DAFVNP010000085.1 tpg gene 9924 10565 . - . ID=gene-L8R42_003802;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=L8R42_003802 DAFVNP010000085.1 Protein Homology CDS 9924 10565 . - 0 ID=cds-HBQ7391839.1;Parent=gene-L8R42_003802;Dbxref=NCBI_GP:HBQ7391839.1;Name=HBQ7391839.1;gbkey=CDS;gene=pyrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=L8R42_003802;product=orotate phosphoribosyltransferase;protein_id=HBQ7391839.1;transl_table=11 DAFVNP010000085.1 tpg gene 10644 11360 . - . ID=gene-L8R42_003803;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=L8R42_003803 DAFVNP010000085.1 Protein Homology CDS 10644 11360 . - 0 ID=cds-HBQ7391840.1;Parent=gene-L8R42_003803;Dbxref=NCBI_GP:HBQ7391840.1;Name=HBQ7391840.1;gbkey=CDS;gene=rph;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=L8R42_003803;product=ribonuclease PH;protein_id=HBQ7391840.1;transl_table=11 DAFVNP010000085.1 tpg gene 11486 12349 . + . ID=gene-L8R42_003804;Name=L8R42_003804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003804 DAFVNP010000085.1 Protein Homology CDS 11486 12349 . + 0 ID=cds-HBQ7391841.1;Parent=gene-L8R42_003804;Dbxref=NCBI_GP:HBQ7391841.1;Name=HBQ7391841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=L8R42_003804;product=YicC family protein;protein_id=HBQ7391841.1;transl_table=11 DAFVNP010000085.1 tpg gene 12538 13797 . + . ID=gene-L8R42_003805;Name=L8R42_003805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003805 DAFVNP010000085.1 Protein Homology CDS 12538 13797 . + 0 ID=cds-HBQ7391842.1;Parent=gene-L8R42_003805;Dbxref=NCBI_GP:HBQ7391842.1;Name=HBQ7391842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014639344.1;locus_tag=L8R42_003805;product=tyrosine-type recombinase/integrase;protein_id=HBQ7391842.1;transl_table=11 DAFVNP010000085.1 tpg gene 13893 14858 . + . ID=gene-L8R42_003806;Name=L8R42_003806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003806 DAFVNP010000085.1 Protein Homology CDS 13893 14858 . + 0 ID=cds-HBQ7391843.1;Parent=gene-L8R42_003806;Dbxref=NCBI_GP:HBQ7391843.1;Name=HBQ7391843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555743.1;locus_tag=L8R42_003806;product=hypothetical protein;protein_id=HBQ7391843.1;transl_table=11 DAFVNP010000085.1 tpg gene 14973 15176 . + . ID=gene-L8R42_003807;Name=L8R42_003807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003807 DAFVNP010000085.1 Protein Homology CDS 14973 15176 . + 0 ID=cds-HBQ7391844.1;Parent=gene-L8R42_003807;Dbxref=NCBI_GP:HBQ7391844.1;Name=HBQ7391844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018038.1;locus_tag=L8R42_003807;product=AlpA family phage regulatory protein;protein_id=HBQ7391844.1;transl_table=11 DAFVNP010000085.1 tpg gene 15176 15607 . + . ID=gene-L8R42_003808;Name=L8R42_003808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003808 DAFVNP010000085.1 Protein Homology CDS 15176 15607 . + 0 ID=cds-HBQ7391845.1;Parent=gene-L8R42_003808;Dbxref=NCBI_GP:HBQ7391845.1;Name=HBQ7391845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001437021.1;locus_tag=L8R42_003808;product=hypothetical protein;protein_id=HBQ7391845.1;transl_table=11 DAFVNP010000085.1 tpg gene 15620 16453 . + . ID=gene-L8R42_003809;Name=L8R42_003809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003809 DAFVNP010000085.1 Protein Homology CDS 15620 16453 . + 0 ID=cds-HBQ7391846.1;Parent=gene-L8R42_003809;Dbxref=NCBI_GP:HBQ7391846.1;Name=HBQ7391846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001019359.1;locus_tag=L8R42_003809;product=antA/AntB antirepressor family protein;protein_id=HBQ7391846.1;transl_table=11 DAFVNP010000085.1 tpg gene 16446 16628 . + . ID=gene-L8R42_003810;Name=L8R42_003810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003810 DAFVNP010000085.1 Protein Homology CDS 16446 16628 . + 0 ID=cds-HBQ7391847.1;Parent=gene-L8R42_003810;Dbxref=NCBI_GP:HBQ7391847.1;Name=HBQ7391847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000476150.1;locus_tag=L8R42_003810;product=DUF4222 domain-containing protein;protein_id=HBQ7391847.1;transl_table=11 DAFVNP010000085.1 tpg gene 16622 17689 . + . ID=gene-L8R42_003811;Name=L8R42_003811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003811 DAFVNP010000085.1 Protein Homology CDS 16622 17689 . + 0 ID=cds-HBQ7391848.1;Parent=gene-L8R42_003811;Dbxref=NCBI_GP:HBQ7391848.1;Name=HBQ7391848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245737.1;locus_tag=L8R42_003811;product=ash family protein;protein_id=HBQ7391848.1;transl_table=11 DAFVNP010000085.1 tpg gene 17682 17876 . + . ID=gene-L8R42_003812;Name=L8R42_003812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003812 DAFVNP010000085.1 Protein Homology CDS 17682 17876 . + 0 ID=cds-HBQ7391849.1;Parent=gene-L8R42_003812;Dbxref=NCBI_GP:HBQ7391849.1;Name=HBQ7391849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065662.1;locus_tag=L8R42_003812;product=hypothetical protein;protein_id=HBQ7391849.1;transl_table=11 DAFVNP010000085.1 tpg gene 17873 18136 . + . ID=gene-L8R42_003813;Name=L8R42_003813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003813 DAFVNP010000085.1 Protein Homology CDS 17873 18136 . + 0 ID=cds-HBQ7391850.1;Parent=gene-L8R42_003813;Dbxref=NCBI_GP:HBQ7391850.1;Name=HBQ7391850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001468267.1;locus_tag=L8R42_003813;product=nicotinic acetylcholine receptor subunit beta;protein_id=HBQ7391850.1;transl_table=11 DAFVNP010000085.1 tpg gene 18133 18354 . + . ID=gene-L8R42_003814;Name=L8R42_003814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003814 DAFVNP010000085.1 Protein Homology CDS 18133 18354 . + 0 ID=cds-HBQ7391851.1;Parent=gene-L8R42_003814;Dbxref=NCBI_GP:HBQ7391851.1;Name=HBQ7391851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181940.1;locus_tag=L8R42_003814;product=hypothetical protein;protein_id=HBQ7391851.1;transl_table=11 DAFVNP010000085.1 tpg gene 18347 18949 . + . ID=gene-L8R42_003815;Name=L8R42_003815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003815 DAFVNP010000085.1 Protein Homology CDS 18347 18949 . + 0 ID=cds-HBQ7391852.1;Parent=gene-L8R42_003815;Dbxref=NCBI_GP:HBQ7391852.1;Name=HBQ7391852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243485.1;locus_tag=L8R42_003815;product=hypothetical protein;protein_id=HBQ7391852.1;transl_table=11 DAFVNP010000085.1 tpg gene 18960 19301 . + . ID=gene-L8R42_003816;Name=L8R42_003816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003816 DAFVNP010000085.1 Protein Homology CDS 18960 19301 . + 0 ID=cds-HBQ7391853.1;Parent=gene-L8R42_003816;Dbxref=NCBI_GP:HBQ7391853.1;Name=HBQ7391853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628964.1;locus_tag=L8R42_003816;product=hypothetical protein;protein_id=HBQ7391853.1;transl_table=11 DAFVNP010000085.1 tpg gene 19294 19486 . + . ID=gene-L8R42_003817;Name=L8R42_003817;end_range=19486,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003817;partial=true DAFVNP010000085.1 Protein Homology CDS 19294 19486 . + 0 ID=cds-HBQ7391854.1;Parent=gene-L8R42_003817;Dbxref=NCBI_GP:HBQ7391854.1;Name=HBQ7391854.1;end_range=19486,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580247.1;locus_tag=L8R42_003817;partial=true;product=hypothetical protein;protein_id=HBQ7391854.1;transl_table=11 ##sequence-region DAFVNP010000086.1 1 19234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000086.1 tpg region 1 19234 . + . ID=DAFVNP010000086.1:1..19234;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000086.1 tpg gene 198 578 . - . ID=gene-L8R42_003818;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=L8R42_003818 DAFVNP010000086.1 Protein Homology CDS 198 578 . - 0 ID=cds-HBQ7391855.1;Parent=gene-L8R42_003818;Dbxref=NCBI_GP:HBQ7391855.1;Name=HBQ7391855.1;gbkey=CDS;gene=panD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=L8R42_003818;product=aspartate 1-decarboxylase;protein_id=HBQ7391855.1;transl_table=11 DAFVNP010000086.1 tpg gene 673 1527 . - . ID=gene-L8R42_003819;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=L8R42_003819 DAFVNP010000086.1 Protein Homology CDS 673 1527 . - 0 ID=cds-HBQ7391856.1;Parent=gene-L8R42_003819;Dbxref=NCBI_GP:HBQ7391856.1;Name=HBQ7391856.1;gbkey=CDS;gene=panC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=L8R42_003819;product=pantoate--beta-alanine ligase;protein_id=HBQ7391856.1;transl_table=11 DAFVNP010000086.1 tpg gene 1653 2444 . - . ID=gene-L8R42_003820;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=L8R42_003820 DAFVNP010000086.1 Protein Homology CDS 1653 2444 . - 0 ID=cds-HBQ7391857.1;Parent=gene-L8R42_003820;Dbxref=NCBI_GP:HBQ7391857.1;Name=HBQ7391857.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=L8R42_003820;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=HBQ7391857.1;transl_table=11 DAFVNP010000086.1 tpg gene 2565 3044 . - . ID=gene-L8R42_003821;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=L8R42_003821 DAFVNP010000086.1 Protein Homology CDS 2565 3044 . - 0 ID=cds-HBQ7391858.1;Parent=gene-L8R42_003821;Dbxref=NCBI_GP:HBQ7391858.1;Name=HBQ7391858.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=L8R42_003821;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=HBQ7391858.1;transl_table=11 DAFVNP010000086.1 tpg gene 3041 4459 . - . ID=gene-L8R42_003822;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=L8R42_003822 DAFVNP010000086.1 Protein Homology CDS 3041 4459 . - 0 ID=cds-HBQ7391859.1;Parent=gene-L8R42_003822;Dbxref=NCBI_GP:HBQ7391859.1;Name=HBQ7391859.1;gbkey=CDS;gene=pcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459189.1;locus_tag=L8R42_003822;product=polynucleotide adenylyltransferase PcnB;protein_id=HBQ7391859.1;transl_table=11 DAFVNP010000086.1 tpg gene 4600 5496 . - . ID=gene-L8R42_003823;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=L8R42_003823 DAFVNP010000086.1 Protein Homology CDS 4600 5496 . - 0 ID=cds-HBQ7391860.1;Parent=gene-L8R42_003823;Dbxref=NCBI_GP:HBQ7391860.1;Name=HBQ7391860.1;gbkey=CDS;gene=gluQRS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=L8R42_003823;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=HBQ7391860.1;transl_table=11 DAFVNP010000086.1 tpg gene 5565 6020 . - . ID=gene-L8R42_003824;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=L8R42_003824 DAFVNP010000086.1 Protein Homology CDS 5565 6020 . - 0 ID=cds-HBQ7391861.1;Parent=gene-L8R42_003824;Dbxref=NCBI_GP:HBQ7391861.1;Name=HBQ7391861.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=L8R42_003824;product=RNA polymerase-binding protein DksA;protein_id=HBQ7391861.1;transl_table=11 DAFVNP010000086.1 tpg gene 6197 6901 . - . ID=gene-L8R42_003825;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=L8R42_003825 DAFVNP010000086.1 Protein Homology CDS 6197 6901 . - 0 ID=cds-HBQ7391862.1;Parent=gene-L8R42_003825;Dbxref=NCBI_GP:HBQ7391862.1;Name=HBQ7391862.1;gbkey=CDS;gene=sfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=L8R42_003825;product=DNA/RNA nuclease SfsA;protein_id=HBQ7391862.1;transl_table=11 DAFVNP010000086.1 tpg gene 6918 7448 . - . ID=gene-L8R42_003826;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=L8R42_003826 DAFVNP010000086.1 Protein Homology CDS 6918 7448 . - 0 ID=cds-HBQ7391863.1;Parent=gene-L8R42_003826;Dbxref=NCBI_GP:HBQ7391863.1;Name=HBQ7391863.1;gbkey=CDS;gene=thpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=L8R42_003826;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=HBQ7391863.1;transl_table=11 DAFVNP010000086.1 tpg gene 7521 9950 . + . ID=gene-L8R42_003827;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=L8R42_003827 DAFVNP010000086.1 Protein Homology CDS 7521 9950 . + 0 ID=cds-HBQ7391864.1;Parent=gene-L8R42_003827;Dbxref=NCBI_GP:HBQ7391864.1;Name=HBQ7391864.1;gbkey=CDS;gene=hrpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=L8R42_003827;product=ATP-dependent helicase HrpB;protein_id=HBQ7391864.1;transl_table=11 DAFVNP010000086.1 tpg gene 10091 12613 . + . ID=gene-L8R42_003828;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=L8R42_003828 DAFVNP010000086.1 Protein Homology CDS 10091 12613 . + 0 ID=cds-HBQ7391865.1;Parent=gene-L8R42_003828;Dbxref=NCBI_GP:HBQ7391865.1;Name=HBQ7391865.1;gbkey=CDS;gene=mrcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=L8R42_003828;product=bifunctional glycosyl transferase/transpeptidase;protein_id=HBQ7391865.1;transl_table=11 DAFVNP010000086.1 tpg gene 12906 15095 . + . ID=gene-L8R42_003829;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=L8R42_003829 DAFVNP010000086.1 Protein Homology CDS 12906 15095 . + 0 ID=cds-HBQ7391866.1;Parent=gene-L8R42_003829;Dbxref=NCBI_GP:HBQ7391866.1;Name=HBQ7391866.1;gbkey=CDS;gene=fhuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=L8R42_003829;product=ferrichrome porin FhuA;protein_id=HBQ7391866.1;transl_table=11 DAFVNP010000086.1 tpg gene 15144 15941 . + . ID=gene-L8R42_003830;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=L8R42_003830 DAFVNP010000086.1 Protein Homology CDS 15144 15941 . + 0 ID=cds-HBQ7391867.1;Parent=gene-L8R42_003830;Dbxref=NCBI_GP:HBQ7391867.1;Name=HBQ7391867.1;gbkey=CDS;gene=fhuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=L8R42_003830;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=HBQ7391867.1;transl_table=11 DAFVNP010000086.1 tpg gene 15941 16831 . + . ID=gene-L8R42_003831;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=L8R42_003831 DAFVNP010000086.1 Protein Homology CDS 15941 16831 . + 0 ID=cds-HBQ7391868.1;Parent=gene-L8R42_003831;Dbxref=NCBI_GP:HBQ7391868.1;Name=HBQ7391868.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=L8R42_003831;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=HBQ7391868.1;transl_table=11 DAFVNP010000086.1 tpg gene 16846 18885 . + . ID=gene-L8R42_003832;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=L8R42_003832 DAFVNP010000086.1 Protein Homology CDS 16846 18885 . + 0 ID=cds-HBQ7391869.1;Parent=gene-L8R42_003832;Dbxref=NCBI_GP:HBQ7391869.1;Name=HBQ7391869.1;gbkey=CDS;gene=fhuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=L8R42_003832;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=HBQ7391869.1;transl_table=11 ##sequence-region DAFVNP010000087.1 1 19028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000087.1 tpg region 1 19028 . + . ID=DAFVNP010000087.1:1..19028;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000087.1 tpg gene 1 1202 . + . ID=gene-L8R42_003833;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=L8R42_003833;partial=true;start_range=.,1 DAFVNP010000087.1 Protein Homology CDS 1 1202 . + 2 ID=cds-HBQ7391870.1;Parent=gene-L8R42_003833;Dbxref=NCBI_GP:HBQ7391870.1;Name=HBQ7391870.1;gbkey=CDS;gene=dpaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=L8R42_003833;partial=true;product=diaminopropionate ammonia-lyase;protein_id=HBQ7391870.1;start_range=.,1;transl_table=11 DAFVNP010000087.1 tpg gene 1448 2881 . + . ID=gene-L8R42_003834;Name=L8R42_003834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003834 DAFVNP010000087.1 Protein Homology CDS 1448 2881 . + 0 ID=cds-HBQ7391871.1;Parent=gene-L8R42_003834;Dbxref=NCBI_GP:HBQ7391871.1;Name=HBQ7391871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459978.1;locus_tag=L8R42_003834;product=sodium:alanine symporter family protein;protein_id=HBQ7391871.1;transl_table=11 DAFVNP010000087.1 tpg gene 2962 4164 . - . ID=gene-L8R42_003835;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=L8R42_003835 DAFVNP010000087.1 Protein Homology CDS 2962 4164 . - 0 ID=cds-HBQ7391872.1;Parent=gene-L8R42_003835;Dbxref=NCBI_GP:HBQ7391872.1;Name=HBQ7391872.1;gbkey=CDS;gene=pncB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=L8R42_003835;product=nicotinate phosphoribosyltransferase;protein_id=HBQ7391872.1;transl_table=11 DAFVNP010000087.1 tpg gene 4431 7043 . + . ID=gene-L8R42_003836;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=L8R42_003836 DAFVNP010000087.1 Protein Homology CDS 4431 7043 . + 0 ID=cds-HBQ7391873.1;Parent=gene-L8R42_003836;Dbxref=NCBI_GP:HBQ7391873.1;Name=HBQ7391873.1;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=L8R42_003836;product=aminopeptidase N;protein_id=HBQ7391873.1;transl_table=11 DAFVNP010000087.1 tpg gene 7251 8261 . + . ID=gene-L8R42_003837;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=L8R42_003837 DAFVNP010000087.1 Protein Homology CDS 7251 8261 . + 0 ID=cds-HBQ7391874.1;Parent=gene-L8R42_003837;Dbxref=NCBI_GP:HBQ7391874.1;Name=HBQ7391874.1;gbkey=CDS;gene=pyrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=L8R42_003837;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=HBQ7391874.1;transl_table=11 DAFVNP010000087.1 tpg gene 8427 8969 . + . ID=gene-L8R42_003838;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=L8R42_003838 DAFVNP010000087.1 Protein Homology CDS 8427 8969 . + 0 ID=cds-HBQ7391875.1;Parent=gene-L8R42_003838;Dbxref=NCBI_GP:HBQ7391875.1;Name=HBQ7391875.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=L8R42_003838;product=cell division protein ZapC;protein_id=HBQ7391875.1;transl_table=11 DAFVNP010000087.1 tpg gene 8966 10075 . - . ID=gene-L8R42_003839;Name=L8R42_003839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003839 DAFVNP010000087.1 Protein Homology CDS 8966 10075 . - 0 ID=cds-HBQ7391876.1;Parent=gene-L8R42_003839;Dbxref=NCBI_GP:HBQ7391876.1;Name=HBQ7391876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=L8R42_003839;product=YcbX family protein;protein_id=HBQ7391876.1;transl_table=11 DAFVNP010000087.1 tpg gene 10174 12282 . + . ID=gene-L8R42_003840;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=L8R42_003840 DAFVNP010000087.1 Protein Homology CDS 10174 12282 . + 0 ID=cds-HBQ7391877.1;Parent=gene-L8R42_003840;Dbxref=NCBI_GP:HBQ7391877.1;Name=HBQ7391877.1;gbkey=CDS;gene=rlmKL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=L8R42_003840;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=HBQ7391877.1;transl_table=11 DAFVNP010000087.1 tpg gene 12295 14202 . + . ID=gene-L8R42_003841;Name=L8R42_003841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003841 DAFVNP010000087.1 Protein Homology CDS 12295 14202 . + 0 ID=cds-HBQ7391878.1;Parent=gene-L8R42_003841;Dbxref=NCBI_GP:HBQ7391878.1;Name=HBQ7391878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=L8R42_003841;product=ABC transporter ATP-binding protein;protein_id=HBQ7391878.1;transl_table=11 DAFVNP010000087.1 tpg gene 14217 15470 . + . ID=gene-L8R42_003842;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=L8R42_003842 DAFVNP010000087.1 Protein Homology CDS 14217 15470 . + 0 ID=cds-HBQ7391879.1;Parent=gene-L8R42_003842;Dbxref=NCBI_GP:HBQ7391879.1;Name=HBQ7391879.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=L8R42_003842;product=membrane integrity-associated transporter subunit PqiA;protein_id=HBQ7391879.1;transl_table=11 DAFVNP010000087.1 tpg gene 15475 17115 . + . ID=gene-L8R42_003843;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=L8R42_003843 DAFVNP010000087.1 Protein Homology CDS 15475 17115 . + 0 ID=cds-HBQ7391880.1;Parent=gene-L8R42_003843;Dbxref=NCBI_GP:HBQ7391880.1;Name=HBQ7391880.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=L8R42_003843;product=intermembrane transport protein PqiB;protein_id=HBQ7391880.1;transl_table=11 DAFVNP010000087.1 tpg gene 17112 17675 . + . ID=gene-L8R42_003844;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=L8R42_003844 DAFVNP010000087.1 Protein Homology CDS 17112 17675 . + 0 ID=cds-HBQ7391881.1;Parent=gene-L8R42_003844;Dbxref=NCBI_GP:HBQ7391881.1;Name=HBQ7391881.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=L8R42_003844;product=membrane integrity-associated transporter subunit PqiC;protein_id=HBQ7391881.1;transl_table=11 DAFVNP010000087.1 tpg gene 17931 18098 . + . ID=gene-L8R42_003845;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=L8R42_003845 DAFVNP010000087.1 Protein Homology CDS 17931 18098 . + 0 ID=cds-HBQ7391882.1;Parent=gene-L8R42_003845;Dbxref=NCBI_GP:HBQ7391882.1;Name=HBQ7391882.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=L8R42_003845;product=ribosome modulation factor;protein_id=HBQ7391882.1;transl_table=11 DAFVNP010000087.1 tpg gene 18198 18716 . - . ID=gene-L8R42_003846;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=L8R42_003846 DAFVNP010000087.1 Protein Homology CDS 18198 18716 . - 0 ID=cds-HBQ7391883.1;Parent=gene-L8R42_003846;Dbxref=NCBI_GP:HBQ7391883.1;Name=HBQ7391883.1;gbkey=CDS;gene=fabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=L8R42_003846;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=HBQ7391883.1;transl_table=11 DAFVNP010000087.1 tpg gene 18785 19028 . - . ID=gene-L8R42_003847;Name=L8R42_003847;end_range=19028,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003847;partial=true DAFVNP010000087.1 Protein Homology CDS 18785 19028 . - 1 ID=cds-HBQ7391884.1;Parent=gene-L8R42_003847;Dbxref=NCBI_GP:HBQ7391884.1;Name=HBQ7391884.1;end_range=19028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=L8R42_003847;partial=true;product=Lon protease family protein;protein_id=HBQ7391884.1;transl_table=11 ##sequence-region DAFVNP010000088.1 1 18823 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000088.1 tpg region 1 18823 . + . ID=DAFVNP010000088.1:1..18823;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000088.1 tpg gene 1 1318 . + . ID=gene-L8R42_003848;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=L8R42_003848;partial=true;start_range=.,1 DAFVNP010000088.1 Protein Homology CDS 1 1318 . + 1 ID=cds-HBQ7391885.1;Parent=gene-L8R42_003848;Dbxref=NCBI_GP:HBQ7391885.1;Name=HBQ7391885.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=L8R42_003848;partial=true;product=Trk system potassium transporter TrkA;protein_id=HBQ7391885.1;start_range=.,1;transl_table=11 DAFVNP010000088.1 tpg gene 1460 1873 . + . ID=gene-L8R42_003849;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=L8R42_003849 DAFVNP010000088.1 Protein Homology CDS 1460 1873 . + 0 ID=cds-HBQ7391886.1;Parent=gene-L8R42_003849;Dbxref=NCBI_GP:HBQ7391886.1;Name=HBQ7391886.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=L8R42_003849;product=large-conductance mechanosensitive channel protein MscL;protein_id=HBQ7391886.1;transl_table=11 DAFVNP010000088.1 tpg gene 1809 2078 . - . ID=gene-L8R42_003850;Name=L8R42_003850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003850 DAFVNP010000088.1 Protein Homology CDS 1809 2078 . - 0 ID=cds-HBQ7391887.1;Parent=gene-L8R42_003850;Dbxref=NCBI_GP:HBQ7391887.1;Name=HBQ7391887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462315.1;locus_tag=L8R42_003850;product=alternative ribosome-rescue factor A;protein_id=HBQ7391887.1;transl_table=11 DAFVNP010000088.1 tpg gene 2136 2561 . - . ID=gene-L8R42_003851;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=L8R42_003851 DAFVNP010000088.1 Protein Homology CDS 2136 2561 . - 0 ID=cds-HBQ7391888.1;Parent=gene-L8R42_003851;Dbxref=NCBI_GP:HBQ7391888.1;Name=HBQ7391888.1;gbkey=CDS;gene=zntR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=L8R42_003851;product=Zn(2+)-responsive transcriptional regulator;protein_id=HBQ7391888.1;transl_table=11 DAFVNP010000088.1 tpg gene 2572 2940 . - . ID=gene-L8R42_003852;Name=L8R42_003852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003852 DAFVNP010000088.1 Protein Homology CDS 2572 2940 . - 0 ID=cds-HBQ7391889.1;Parent=gene-L8R42_003852;Dbxref=NCBI_GP:HBQ7391889.1;Name=HBQ7391889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=L8R42_003852;product=DUF1992 domain-containing protein;protein_id=HBQ7391889.1;transl_table=11 DAFVNP010000088.1 tpg gene 3048 3431 . - . ID=gene-L8R42_003853;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=L8R42_003853 DAFVNP010000088.1 Protein Homology CDS 3048 3431 . - 0 ID=cds-HBQ7391890.1;Parent=gene-L8R42_003853;Dbxref=NCBI_GP:HBQ7391890.1;Name=HBQ7391890.1;gbkey=CDS;gene=rplQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=L8R42_003853;product=50S ribosomal protein L17;protein_id=HBQ7391890.1;transl_table=11 DAFVNP010000088.1 tpg gene 3472 4461 . - . ID=gene-L8R42_003854;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=L8R42_003854 DAFVNP010000088.1 Protein Homology CDS 3472 4461 . - 0 ID=cds-HBQ7391891.1;Parent=gene-L8R42_003854;Dbxref=NCBI_GP:HBQ7391891.1;Name=HBQ7391891.1;gbkey=CDS;gene=rpoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=L8R42_003854;product=DNA-directed RNA polymerase subunit alpha;protein_id=HBQ7391891.1;transl_table=11 DAFVNP010000088.1 tpg gene 4487 5107 . - . ID=gene-L8R42_003855;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=L8R42_003855 DAFVNP010000088.1 Protein Homology CDS 4487 5107 . - 0 ID=cds-HBQ7391892.1;Parent=gene-L8R42_003855;Dbxref=NCBI_GP:HBQ7391892.1;Name=HBQ7391892.1;gbkey=CDS;gene=rpsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=L8R42_003855;product=30S ribosomal protein S4;protein_id=HBQ7391892.1;transl_table=11 DAFVNP010000088.1 tpg gene 5141 5530 . - . ID=gene-L8R42_003856;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=L8R42_003856 DAFVNP010000088.1 Protein Homology CDS 5141 5530 . - 0 ID=cds-HBQ7391893.1;Parent=gene-L8R42_003856;Dbxref=NCBI_GP:HBQ7391893.1;Name=HBQ7391893.1;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=L8R42_003856;product=30S ribosomal protein S11;protein_id=HBQ7391893.1;transl_table=11 DAFVNP010000088.1 tpg gene 5547 5903 . - . ID=gene-L8R42_003857;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=L8R42_003857 DAFVNP010000088.1 Protein Homology CDS 5547 5903 . - 0 ID=cds-HBQ7391894.1;Parent=gene-L8R42_003857;Dbxref=NCBI_GP:HBQ7391894.1;Name=HBQ7391894.1;gbkey=CDS;gene=rpsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=L8R42_003857;product=30S ribosomal protein S13;protein_id=HBQ7391894.1;transl_table=11 DAFVNP010000088.1 tpg gene 6050 6166 . - . ID=gene-L8R42_003858;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=L8R42_003858 DAFVNP010000088.1 Protein Homology CDS 6050 6166 . - 0 ID=cds-HBQ7391895.1;Parent=gene-L8R42_003858;Dbxref=NCBI_GP:HBQ7391895.1;Name=HBQ7391895.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=L8R42_003858;product=50S ribosomal protein L36;protein_id=HBQ7391895.1;transl_table=11 DAFVNP010000088.1 tpg gene 6198 7529 . - . ID=gene-L8R42_003859;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=L8R42_003859 DAFVNP010000088.1 Protein Homology CDS 6198 7529 . - 0 ID=cds-HBQ7391896.1;Parent=gene-L8R42_003859;Dbxref=NCBI_GP:HBQ7391896.1;Name=HBQ7391896.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=L8R42_003859;product=preprotein translocase subunit SecY;protein_id=HBQ7391896.1;transl_table=11 DAFVNP010000088.1 tpg gene 7537 7971 . - . ID=gene-L8R42_003860;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=L8R42_003860 DAFVNP010000088.1 Protein Homology CDS 7537 7971 . - 0 ID=cds-HBQ7391897.1;Parent=gene-L8R42_003860;Dbxref=NCBI_GP:HBQ7391897.1;Name=HBQ7391897.1;gbkey=CDS;gene=rplO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=L8R42_003860;product=50S ribosomal protein L15;protein_id=HBQ7391897.1;transl_table=11 DAFVNP010000088.1 tpg gene 7975 8154 . - . ID=gene-L8R42_003861;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=L8R42_003861 DAFVNP010000088.1 Protein Homology CDS 7975 8154 . - 0 ID=cds-HBQ7391898.1;Parent=gene-L8R42_003861;Dbxref=NCBI_GP:HBQ7391898.1;Name=HBQ7391898.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=L8R42_003861;product=50S ribosomal protein L30;protein_id=HBQ7391898.1;transl_table=11 DAFVNP010000088.1 tpg gene 8158 8661 . - . ID=gene-L8R42_003862;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=L8R42_003862 DAFVNP010000088.1 Protein Homology CDS 8158 8661 . - 0 ID=cds-HBQ7391899.1;Parent=gene-L8R42_003862;Dbxref=NCBI_GP:HBQ7391899.1;Name=HBQ7391899.1;gbkey=CDS;gene=rpsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=L8R42_003862;product=30S ribosomal protein S5;protein_id=HBQ7391899.1;transl_table=11 DAFVNP010000088.1 tpg gene 8676 9029 . - . ID=gene-L8R42_003863;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=L8R42_003863 DAFVNP010000088.1 Protein Homology CDS 8676 9029 . - 0 ID=cds-HBQ7391900.1;Parent=gene-L8R42_003863;Dbxref=NCBI_GP:HBQ7391900.1;Name=HBQ7391900.1;gbkey=CDS;gene=rplR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=L8R42_003863;product=50S ribosomal protein L18;protein_id=HBQ7391900.1;transl_table=11 DAFVNP010000088.1 tpg gene 9039 9572 . - . ID=gene-L8R42_003864;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=L8R42_003864 DAFVNP010000088.1 Protein Homology CDS 9039 9572 . - 0 ID=cds-HBQ7391901.1;Parent=gene-L8R42_003864;Dbxref=NCBI_GP:HBQ7391901.1;Name=HBQ7391901.1;gbkey=CDS;gene=rplF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=L8R42_003864;product=50S ribosomal protein L6;protein_id=HBQ7391901.1;transl_table=11 DAFVNP010000088.1 tpg gene 9585 9977 . - . ID=gene-L8R42_003865;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=L8R42_003865 DAFVNP010000088.1 Protein Homology CDS 9585 9977 . - 0 ID=cds-HBQ7391902.1;Parent=gene-L8R42_003865;Dbxref=NCBI_GP:HBQ7391902.1;Name=HBQ7391902.1;gbkey=CDS;gene=rpsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=L8R42_003865;product=30S ribosomal protein S8;protein_id=HBQ7391902.1;transl_table=11 DAFVNP010000088.1 tpg gene 10011 10316 . - . ID=gene-L8R42_003866;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=L8R42_003866 DAFVNP010000088.1 Protein Homology CDS 10011 10316 . - 0 ID=cds-HBQ7391903.1;Parent=gene-L8R42_003866;Dbxref=NCBI_GP:HBQ7391903.1;Name=HBQ7391903.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=L8R42_003866;product=30S ribosomal protein S14;protein_id=HBQ7391903.1;transl_table=11 DAFVNP010000088.1 tpg gene 10331 10870 . - . ID=gene-L8R42_003867;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=L8R42_003867 DAFVNP010000088.1 Protein Homology CDS 10331 10870 . - 0 ID=cds-HBQ7391904.1;Parent=gene-L8R42_003867;Dbxref=NCBI_GP:HBQ7391904.1;Name=HBQ7391904.1;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=L8R42_003867;product=50S ribosomal protein L5;protein_id=HBQ7391904.1;transl_table=11 DAFVNP010000088.1 tpg gene 10885 11199 . - . ID=gene-L8R42_003868;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=L8R42_003868 DAFVNP010000088.1 Protein Homology CDS 10885 11199 . - 0 ID=cds-HBQ7391905.1;Parent=gene-L8R42_003868;Dbxref=NCBI_GP:HBQ7391905.1;Name=HBQ7391905.1;gbkey=CDS;gene=rplX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=L8R42_003868;product=50S ribosomal protein L24;protein_id=HBQ7391905.1;transl_table=11 DAFVNP010000088.1 tpg gene 11210 11581 . - . ID=gene-L8R42_003869;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=L8R42_003869 DAFVNP010000088.1 Protein Homology CDS 11210 11581 . - 0 ID=cds-HBQ7391906.1;Parent=gene-L8R42_003869;Dbxref=NCBI_GP:HBQ7391906.1;Name=HBQ7391906.1;gbkey=CDS;gene=rplN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015817037.1;locus_tag=L8R42_003869;product=50S ribosomal protein L14;protein_id=HBQ7391906.1;transl_table=11 DAFVNP010000088.1 tpg gene 11745 11999 . - . ID=gene-L8R42_003870;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=L8R42_003870 DAFVNP010000088.1 Protein Homology CDS 11745 11999 . - 0 ID=cds-HBQ7391907.1;Parent=gene-L8R42_003870;Dbxref=NCBI_GP:HBQ7391907.1;Name=HBQ7391907.1;gbkey=CDS;gene=rpsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=L8R42_003870;product=30S ribosomal protein S17;protein_id=HBQ7391907.1;transl_table=11 DAFVNP010000088.1 tpg gene 11999 12190 . - . ID=gene-L8R42_003871;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=L8R42_003871 DAFVNP010000088.1 Protein Homology CDS 11999 12190 . - 0 ID=cds-HBQ7391908.1;Parent=gene-L8R42_003871;Dbxref=NCBI_GP:HBQ7391908.1;Name=HBQ7391908.1;gbkey=CDS;gene=rpmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=L8R42_003871;product=50S ribosomal protein L29;protein_id=HBQ7391908.1;transl_table=11 DAFVNP010000088.1 tpg gene 12190 12600 . - . ID=gene-L8R42_003872;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=L8R42_003872 DAFVNP010000088.1 Protein Homology CDS 12190 12600 . - 0 ID=cds-HBQ7391909.1;Parent=gene-L8R42_003872;Dbxref=NCBI_GP:HBQ7391909.1;Name=HBQ7391909.1;gbkey=CDS;gene=rplP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=L8R42_003872;product=50S ribosomal protein L16;protein_id=HBQ7391909.1;transl_table=11 DAFVNP010000088.1 tpg gene 12613 13314 . - . ID=gene-L8R42_003873;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=L8R42_003873 DAFVNP010000088.1 Protein Homology CDS 12613 13314 . - 0 ID=cds-HBQ7391910.1;Parent=gene-L8R42_003873;Dbxref=NCBI_GP:HBQ7391910.1;Name=HBQ7391910.1;gbkey=CDS;gene=rpsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=L8R42_003873;product=30S ribosomal protein S3;protein_id=HBQ7391910.1;transl_table=11 DAFVNP010000088.1 tpg gene 13332 13664 . - . ID=gene-L8R42_003874;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=L8R42_003874 DAFVNP010000088.1 Protein Homology CDS 13332 13664 . - 0 ID=cds-HBQ7391911.1;Parent=gene-L8R42_003874;Dbxref=NCBI_GP:HBQ7391911.1;Name=HBQ7391911.1;gbkey=CDS;gene=rplV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=L8R42_003874;product=50S ribosomal protein L22;protein_id=HBQ7391911.1;transl_table=11 DAFVNP010000088.1 tpg gene 13679 13957 . - . ID=gene-L8R42_003875;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=L8R42_003875 DAFVNP010000088.1 Protein Homology CDS 13679 13957 . - 0 ID=cds-HBQ7391912.1;Parent=gene-L8R42_003875;Dbxref=NCBI_GP:HBQ7391912.1;Name=HBQ7391912.1;gbkey=CDS;gene=rpsS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=L8R42_003875;product=30S ribosomal protein S19;protein_id=HBQ7391912.1;transl_table=11 DAFVNP010000088.1 tpg gene 13974 14795 . - . ID=gene-L8R42_003876;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=L8R42_003876 DAFVNP010000088.1 Protein Homology CDS 13974 14795 . - 0 ID=cds-HBQ7391913.1;Parent=gene-L8R42_003876;Dbxref=NCBI_GP:HBQ7391913.1;Name=HBQ7391913.1;gbkey=CDS;gene=rplB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=L8R42_003876;product=50S ribosomal protein L2;protein_id=HBQ7391913.1;transl_table=11 DAFVNP010000088.1 tpg gene 14813 15115 . - . ID=gene-L8R42_003877;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=L8R42_003877 DAFVNP010000088.1 Protein Homology CDS 14813 15115 . - 0 ID=cds-HBQ7391914.1;Parent=gene-L8R42_003877;Dbxref=NCBI_GP:HBQ7391914.1;Name=HBQ7391914.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=L8R42_003877;product=50S ribosomal protein L23;protein_id=HBQ7391914.1;transl_table=11 DAFVNP010000088.1 tpg gene 15112 15717 . - . ID=gene-L8R42_003878;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=L8R42_003878 DAFVNP010000088.1 Protein Homology CDS 15112 15717 . - 0 ID=cds-HBQ7391915.1;Parent=gene-L8R42_003878;Dbxref=NCBI_GP:HBQ7391915.1;Name=HBQ7391915.1;gbkey=CDS;gene=rplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=L8R42_003878;product=50S ribosomal protein L4;protein_id=HBQ7391915.1;transl_table=11 DAFVNP010000088.1 tpg gene 15728 16357 . - . ID=gene-L8R42_003879;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=L8R42_003879 DAFVNP010000088.1 Protein Homology CDS 15728 16357 . - 0 ID=cds-HBQ7391916.1;Parent=gene-L8R42_003879;Dbxref=NCBI_GP:HBQ7391916.1;Name=HBQ7391916.1;gbkey=CDS;gene=rplC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=L8R42_003879;product=50S ribosomal protein L3;protein_id=HBQ7391916.1;transl_table=11 DAFVNP010000088.1 tpg gene 16390 16701 . - . ID=gene-L8R42_003880;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=L8R42_003880 DAFVNP010000088.1 Protein Homology CDS 16390 16701 . - 0 ID=cds-HBQ7391917.1;Parent=gene-L8R42_003880;Dbxref=NCBI_GP:HBQ7391917.1;Name=HBQ7391917.1;gbkey=CDS;gene=rpsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=L8R42_003880;product=30S ribosomal protein S10;protein_id=HBQ7391917.1;transl_table=11 DAFVNP010000088.1 tpg gene 17081 17548 . + . ID=gene-L8R42_003881;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=L8R42_003881 DAFVNP010000088.1 Protein Homology CDS 17081 17548 . + 0 ID=cds-HBQ7391918.1;Parent=gene-L8R42_003881;Dbxref=NCBI_GP:HBQ7391918.1;Name=HBQ7391918.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=L8R42_003881;product=leader peptidase HopD;protein_id=HBQ7391918.1;transl_table=11 DAFVNP010000088.1 tpg gene 17545 18021 . - . ID=gene-L8R42_003882;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=L8R42_003882 DAFVNP010000088.1 Protein Homology CDS 17545 18021 . - 0 ID=cds-HBQ7391919.1;Parent=gene-L8R42_003882;Dbxref=NCBI_GP:HBQ7391919.1;Name=HBQ7391919.1;gbkey=CDS;gene=bfr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=L8R42_003882;product=bacterioferritin;protein_id=HBQ7391919.1;transl_table=11 DAFVNP010000088.1 tpg gene 18094 18288 . - . ID=gene-L8R42_003883;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=L8R42_003883 DAFVNP010000088.1 Protein Homology CDS 18094 18288 . - 0 ID=cds-HBQ7391920.1;Parent=gene-L8R42_003883;Dbxref=NCBI_GP:HBQ7391920.1;Name=HBQ7391920.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=L8R42_003883;product=bacterioferritin-associated ferredoxin;protein_id=HBQ7391920.1;transl_table=11 DAFVNP010000088.1 tpg gene 18473 18823 . - . ID=gene-L8R42_003884;Name=tuf;end_range=18823,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=L8R42_003884;partial=true DAFVNP010000088.1 Protein Homology CDS 18473 18823 . - 0 ID=cds-HBQ7391921.1;Parent=gene-L8R42_003884;Dbxref=NCBI_GP:HBQ7391921.1;Name=HBQ7391921.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;end_range=18823,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=L8R42_003884;partial=true;product=elongation factor Tu;protein_id=HBQ7391921.1;transl_table=11 ##sequence-region DAFVNP010000089.1 1 18812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000089.1 tpg region 1 18812 . + . ID=DAFVNP010000089.1:1..18812;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000089.1 tpg gene 1 752 . + . ID=gene-L8R42_003885;Name=L8R42_003885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003885;partial=true;start_range=.,1 DAFVNP010000089.1 Protein Homology CDS 1 752 . + 2 ID=cds-HBQ7391922.1;Parent=gene-L8R42_003885;Dbxref=NCBI_GP:HBQ7391922.1;Name=HBQ7391922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=L8R42_003885;partial=true;product=tetratricopeptide repeat protein;protein_id=HBQ7391922.1;start_range=.,1;transl_table=11 DAFVNP010000089.1 tpg gene 874 2100 . + . ID=gene-L8R42_003886;Name=L8R42_003886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003886 DAFVNP010000089.1 Protein Homology CDS 874 2100 . + 0 ID=cds-HBQ7391923.1;Parent=gene-L8R42_003886;Dbxref=NCBI_GP:HBQ7391923.1;Name=HBQ7391923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=L8R42_003886;product=DUF3748 domain-containing protein;protein_id=HBQ7391923.1;transl_table=11 DAFVNP010000089.1 tpg gene 2102 2434 . - . ID=gene-L8R42_003887;Name=L8R42_003887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003887 DAFVNP010000089.1 Protein Homology CDS 2102 2434 . - 0 ID=cds-HBQ7391924.1;Parent=gene-L8R42_003887;Dbxref=NCBI_GP:HBQ7391924.1;Name=HBQ7391924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=L8R42_003887;product=YceK/YidQ family lipoprotein;protein_id=HBQ7391924.1;transl_table=11 DAFVNP010000089.1 cmsearch sequence_feature 2677 2750 . + . ID=id-DAFVNP010000089.1:2677..2750;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 DAFVNP010000089.1 tpg gene 2744 3157 . + . ID=gene-L8R42_003888;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=L8R42_003888 DAFVNP010000089.1 Protein Homology CDS 2744 3157 . + 0 ID=cds-HBQ7391925.1;Parent=gene-L8R42_003888;Dbxref=NCBI_GP:HBQ7391925.1;Name=HBQ7391925.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=L8R42_003888;product=heat shock chaperone IbpA;protein_id=HBQ7391925.1;transl_table=11 DAFVNP010000089.1 tpg gene 3267 3695 . + . ID=gene-L8R42_003889;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=L8R42_003889 DAFVNP010000089.1 Protein Homology CDS 3267 3695 . + 0 ID=cds-HBQ7391926.1;Parent=gene-L8R42_003889;Dbxref=NCBI_GP:HBQ7391926.1;Name=HBQ7391926.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=L8R42_003889;product=heat shock chaperone IbpB;protein_id=HBQ7391926.1;transl_table=11 DAFVNP010000089.1 tpg gene 3884 5545 . + . ID=gene-L8R42_003890;Name=L8R42_003890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003890 DAFVNP010000089.1 Protein Homology CDS 3884 5545 . + 0 ID=cds-HBQ7391927.1;Parent=gene-L8R42_003890;Dbxref=NCBI_GP:HBQ7391927.1;Name=HBQ7391927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=L8R42_003890;product=putative transporter;protein_id=HBQ7391927.1;transl_table=11 DAFVNP010000089.1 tpg gene 5530 5868 . + . ID=gene-L8R42_003891;Name=L8R42_003891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003891 DAFVNP010000089.1 GeneMarkS-2+ CDS 5530 5868 . + 0 ID=cds-HBQ7391928.1;Parent=gene-L8R42_003891;Dbxref=NCBI_GP:HBQ7391928.1;Name=HBQ7391928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_003891;product=hypothetical protein;protein_id=HBQ7391928.1;transl_table=11 DAFVNP010000089.1 tpg gene 5988 6335 . + . ID=gene-L8R42_003892;Name=L8R42_003892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003892 DAFVNP010000089.1 Protein Homology CDS 5988 6335 . + 0 ID=cds-HBQ7391929.1;Parent=gene-L8R42_003892;Dbxref=NCBI_GP:HBQ7391929.1;Name=HBQ7391929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=L8R42_003892;product=YidH family protein;protein_id=HBQ7391929.1;transl_table=11 DAFVNP010000089.1 tpg gene 6325 6687 . + . ID=gene-L8R42_003893;Name=L8R42_003893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003893 DAFVNP010000089.1 Protein Homology CDS 6325 6687 . + 0 ID=cds-HBQ7391930.1;Parent=gene-L8R42_003893;Dbxref=NCBI_GP:HBQ7391930.1;Name=HBQ7391930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=L8R42_003893;product=DUF202 domain-containing protein;protein_id=HBQ7391930.1;transl_table=11 DAFVNP010000089.1 tpg gene 6684 7214 . + . ID=gene-L8R42_003894;Name=L8R42_003894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003894 DAFVNP010000089.1 Protein Homology CDS 6684 7214 . + 0 ID=cds-HBQ7391931.1;Parent=gene-L8R42_003894;Dbxref=NCBI_GP:HBQ7391931.1;Name=HBQ7391931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=L8R42_003894;product=radical SAM protein;protein_id=HBQ7391931.1;transl_table=11 DAFVNP010000089.1 tpg gene 7296 8618 . - . ID=gene-L8R42_003895;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=L8R42_003895 DAFVNP010000089.1 Protein Homology CDS 7296 8618 . - 0 ID=cds-HBQ7391932.1;Parent=gene-L8R42_003895;Dbxref=NCBI_GP:HBQ7391932.1;Name=HBQ7391932.1;gbkey=CDS;gene=dsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=L8R42_003895;product=D-serine ammonia-lyase;protein_id=HBQ7391932.1;transl_table=11 DAFVNP010000089.1 tpg gene 8636 9973 . - . ID=gene-L8R42_003896;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=L8R42_003896 DAFVNP010000089.1 Protein Homology CDS 8636 9973 . - 0 ID=cds-HBQ7391933.1;Parent=gene-L8R42_003896;Dbxref=NCBI_GP:HBQ7391933.1;Name=HBQ7391933.1;gbkey=CDS;gene=dsdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=L8R42_003896;product=D-serine transporter DsdX;protein_id=HBQ7391933.1;transl_table=11 DAFVNP010000089.1 tpg gene 10199 11122 . + . ID=gene-L8R42_003897;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=L8R42_003897 DAFVNP010000089.1 Protein Homology CDS 10199 11122 . + 0 ID=cds-HBQ7391934.1;Parent=gene-L8R42_003897;Dbxref=NCBI_GP:HBQ7391934.1;Name=HBQ7391934.1;gbkey=CDS;gene=dsdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=L8R42_003897;product=DNA-binding transcriptional regulator DsdC;protein_id=HBQ7391934.1;transl_table=11 DAFVNP010000089.1 tpg gene 11186 12271 . + . ID=gene-L8R42_003898;Name=L8R42_003898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003898 DAFVNP010000089.1 Protein Homology CDS 11186 12271 . + 0 ID=cds-HBQ7391935.1;Parent=gene-L8R42_003898;Dbxref=NCBI_GP:HBQ7391935.1;Name=HBQ7391935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=L8R42_003898;product=cellulase family glycosylhydrolase;protein_id=HBQ7391935.1;transl_table=11 DAFVNP010000089.1 tpg gene 12198 13382 . - . ID=gene-L8R42_003899;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=L8R42_003899 DAFVNP010000089.1 Protein Homology CDS 12198 13382 . - 0 ID=cds-HBQ7391936.1;Parent=gene-L8R42_003899;Dbxref=NCBI_GP:HBQ7391936.1;Name=HBQ7391936.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=L8R42_003899;product=multidrug efflux MFS transporter EmrD;protein_id=HBQ7391936.1;transl_table=11 DAFVNP010000089.1 tpg gene 13585 14445 . - . ID=gene-L8R42_003900;Name=L8R42_003900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003900 DAFVNP010000089.1 Protein Homology CDS 13585 14445 . - 0 ID=cds-HBQ7391937.1;Parent=gene-L8R42_003900;Dbxref=NCBI_GP:HBQ7391937.1;Name=HBQ7391937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=L8R42_003900;product=EamA family transporter;protein_id=HBQ7391937.1;transl_table=11 DAFVNP010000089.1 tpg gene 14538 14627 . - . ID=gene-L8R42_003901;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=L8R42_003901 DAFVNP010000089.1 Protein Homology CDS 14538 14627 . - 0 ID=cds-HBQ7391938.1;Parent=gene-L8R42_003901;Dbxref=NCBI_GP:HBQ7391938.1;Name=HBQ7391938.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=L8R42_003901;product=type I toxin-antitoxin system toxin TisB;protein_id=HBQ7391938.1;transl_table=11 DAFVNP010000089.1 tpg pseudogene 14624 14738 . - . ID=gene-L8R42_003902;Name=L8R42_003902;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003902;pseudo=true DAFVNP010000089.1 Protein Homology CDS 14624 14738 . - 0 ID=cds-L8R42_003902;Parent=gene-L8R42_003902;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=L8R42_003902;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000089.1 tpg gene 15261 15359 . + . ID=gene-L8R42_003903;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=L8R42_003903 DAFVNP010000089.1 Protein Homology CDS 15261 15359 . + 0 ID=cds-HBQ7391939.1;Parent=gene-L8R42_003903;Dbxref=NCBI_GP:HBQ7391939.1;Name=HBQ7391939.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=L8R42_003903;product=ilvB operon leader peptide IvbL;protein_id=HBQ7391939.1;transl_table=11 DAFVNP010000089.1 tpg gene 15466 17154 . + . ID=gene-L8R42_003904;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=L8R42_003904 DAFVNP010000089.1 Protein Homology CDS 15466 17154 . + 0 ID=cds-HBQ7391940.1;Parent=gene-L8R42_003904;Dbxref=NCBI_GP:HBQ7391940.1;Name=HBQ7391940.1;gbkey=CDS;gene=ilvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=L8R42_003904;product=acetolactate synthase large subunit;protein_id=HBQ7391940.1;transl_table=11 DAFVNP010000089.1 tpg gene 17158 17448 . + . ID=gene-L8R42_003905;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=L8R42_003905 DAFVNP010000089.1 Protein Homology CDS 17158 17448 . + 0 ID=cds-HBQ7391941.1;Parent=gene-L8R42_003905;Dbxref=NCBI_GP:HBQ7391941.1;Name=HBQ7391941.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=L8R42_003905;product=acetolactate synthase small subunit;protein_id=HBQ7391941.1;transl_table=11 DAFVNP010000089.1 tpg gene 17450 18235 . - . ID=gene-L8R42_003906;Name=L8R42_003906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003906 DAFVNP010000089.1 Protein Homology CDS 17450 18235 . - 0 ID=cds-HBQ7391942.1;Parent=gene-L8R42_003906;Dbxref=NCBI_GP:HBQ7391942.1;Name=HBQ7391942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=L8R42_003906;product=DeoR family transcriptional regulator;protein_id=HBQ7391942.1;transl_table=11 DAFVNP010000089.1 tpg gene 18560 18812 . + . ID=gene-L8R42_003907;Name=L8R42_003907;end_range=18812,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003907;partial=true DAFVNP010000089.1 Protein Homology CDS 18560 18812 . + 0 ID=cds-HBQ7391943.1;Parent=gene-L8R42_003907;Dbxref=NCBI_GP:HBQ7391943.1;Name=HBQ7391943.1;end_range=18812,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=L8R42_003907;partial=true;product=ribokinase;protein_id=HBQ7391943.1;transl_table=11 ##sequence-region DAFVNP010000090.1 1 18603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000090.1 tpg region 1 18603 . + . ID=DAFVNP010000090.1:1..18603;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000090.1 tpg gene 1 401 . + . ID=gene-L8R42_003908;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=L8R42_003908;partial=true;start_range=.,1 DAFVNP010000090.1 Protein Homology CDS 1 401 . + 2 ID=cds-HBQ7391944.1;Parent=gene-L8R42_003908;Dbxref=NCBI_GP:HBQ7391944.1;Name=HBQ7391944.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=L8R42_003908;partial=true;product=SPI-2 type III secretion system protein SpiA;protein_id=HBQ7391944.1;start_range=.,1;transl_table=11 DAFVNP010000090.1 tpg gene 382 1593 . + . ID=gene-L8R42_003909;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=L8R42_003909 DAFVNP010000090.1 Protein Homology CDS 382 1593 . + 0 ID=cds-HBQ7391945.1;Parent=gene-L8R42_003909;Dbxref=NCBI_GP:HBQ7391945.1;Name=HBQ7391945.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=L8R42_003909;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=HBQ7391945.1;transl_table=11 DAFVNP010000090.1 tpg gene 1601 1843 . + . ID=gene-L8R42_003910;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=L8R42_003910 DAFVNP010000090.1 Protein Homology CDS 1601 1843 . + 0 ID=cds-HBQ7391946.1;Parent=gene-L8R42_003910;Dbxref=NCBI_GP:HBQ7391946.1;Name=HBQ7391946.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=L8R42_003910;product=YscE family type III secretion system co-chaperone SsaE;protein_id=HBQ7391946.1;transl_table=11 DAFVNP010000090.1 tpg gene 2106 2432 . + . ID=gene-L8R42_003911;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=L8R42_003911 DAFVNP010000090.1 Protein Homology CDS 2106 2432 . + 0 ID=cds-HBQ7391947.1;Parent=gene-L8R42_003911;Dbxref=NCBI_GP:HBQ7391947.1;Name=HBQ7391947.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=L8R42_003911;product=SPI-2 type III secretion system chaperone SseA;protein_id=HBQ7391947.1;transl_table=11 DAFVNP010000090.1 tpg gene 2439 3029 . + . ID=gene-L8R42_003912;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=L8R42_003912 DAFVNP010000090.1 Protein Homology CDS 2439 3029 . + 0 ID=cds-HBQ7391948.1;Parent=gene-L8R42_003912;Dbxref=NCBI_GP:HBQ7391948.1;Name=HBQ7391948.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=L8R42_003912;product=SPI-2 type III secretion system translocon protein SseB;protein_id=HBQ7391948.1;transl_table=11 DAFVNP010000090.1 tpg gene 3026 3499 . + . ID=gene-L8R42_003913;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=L8R42_003913 DAFVNP010000090.1 Protein Homology CDS 3026 3499 . + 0 ID=cds-HBQ7391949.1;Parent=gene-L8R42_003913;Dbxref=NCBI_GP:HBQ7391949.1;Name=HBQ7391949.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=L8R42_003913;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=HBQ7391949.1;transl_table=11 DAFVNP010000090.1 tpg gene 3502 4956 . + . ID=gene-L8R42_003914;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=L8R42_003914 DAFVNP010000090.1 Protein Homology CDS 3502 4956 . + 0 ID=cds-HBQ7391950.1;Parent=gene-L8R42_003914;Dbxref=NCBI_GP:HBQ7391950.1;Name=HBQ7391950.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=L8R42_003914;product=SPI-2 type III secretion system translocon protein SseC;protein_id=HBQ7391950.1;transl_table=11 DAFVNP010000090.1 tpg gene 4972 5559 . + . ID=gene-L8R42_003915;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=L8R42_003915 DAFVNP010000090.1 Protein Homology CDS 4972 5559 . + 0 ID=cds-HBQ7391951.1;Parent=gene-L8R42_003915;Dbxref=NCBI_GP:HBQ7391951.1;Name=HBQ7391951.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=L8R42_003915;product=SPI-2 type III secretion system translocon protein SseD;protein_id=HBQ7391951.1;transl_table=11 DAFVNP010000090.1 tpg gene 5562 5978 . + . ID=gene-L8R42_003916;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=L8R42_003916 DAFVNP010000090.1 Protein Homology CDS 5562 5978 . + 0 ID=cds-HBQ7391952.1;Parent=gene-L8R42_003916;Dbxref=NCBI_GP:HBQ7391952.1;Name=HBQ7391952.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=L8R42_003916;product=LcrR family type III secretion system chaperone SseE;protein_id=HBQ7391952.1;transl_table=11 DAFVNP010000090.1 tpg gene 6030 6464 . + . ID=gene-L8R42_003917;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=L8R42_003917 DAFVNP010000090.1 Protein Homology CDS 6030 6464 . + 0 ID=cds-HBQ7391953.1;Parent=gene-L8R42_003917;Dbxref=NCBI_GP:HBQ7391953.1;Name=HBQ7391953.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=L8R42_003917;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=HBQ7391953.1;transl_table=11 DAFVNP010000090.1 tpg gene 6480 7262 . + . ID=gene-L8R42_003918;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=L8R42_003918 DAFVNP010000090.1 Protein Homology CDS 6480 7262 . + 0 ID=cds-HBQ7391954.1;Parent=gene-L8R42_003918;Dbxref=NCBI_GP:HBQ7391954.1;Name=HBQ7391954.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=L8R42_003918;product=type III secretion systems effector SseF;protein_id=HBQ7391954.1;transl_table=11 DAFVNP010000090.1 tpg gene 7259 7948 . + . ID=gene-L8R42_003919;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=L8R42_003919 DAFVNP010000090.1 Protein Homology CDS 7259 7948 . + 0 ID=cds-HBQ7391955.1;Parent=gene-L8R42_003919;Dbxref=NCBI_GP:HBQ7391955.1;Name=HBQ7391955.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=L8R42_003919;product=pathogenicity island 2 effector protein SseG;protein_id=HBQ7391955.1;transl_table=11 DAFVNP010000090.1 tpg gene 8041 8256 . + . ID=gene-L8R42_003920;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=L8R42_003920 DAFVNP010000090.1 Protein Homology CDS 8041 8256 . + 0 ID=cds-HBQ7391956.1;Parent=gene-L8R42_003920;Dbxref=NCBI_GP:HBQ7391956.1;Name=HBQ7391956.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=L8R42_003920;product=type III secretion system needle filament protein SsaG;protein_id=HBQ7391956.1;transl_table=11 DAFVNP010000090.1 tpg gene 8234 8524 . + . ID=gene-L8R42_003921;Name=L8R42_003921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003921 DAFVNP010000090.1 Protein Homology CDS 8234 8524 . + 0 ID=cds-HBQ7391957.1;Parent=gene-L8R42_003921;Dbxref=NCBI_GP:HBQ7391957.1;Name=HBQ7391957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=L8R42_003921;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=HBQ7391957.1;transl_table=11 DAFVNP010000090.1 tpg gene 8536 8784 . + . ID=gene-L8R42_003922;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=L8R42_003922 DAFVNP010000090.1 Protein Homology CDS 8536 8784 . + 0 ID=cds-HBQ7391958.1;Parent=gene-L8R42_003922;Dbxref=NCBI_GP:HBQ7391958.1;Name=HBQ7391958.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=L8R42_003922;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=HBQ7391958.1;transl_table=11 DAFVNP010000090.1 tpg gene 8781 9530 . + . ID=gene-L8R42_003923;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=L8R42_003923 DAFVNP010000090.1 Protein Homology CDS 8781 9530 . + 0 ID=cds-HBQ7391959.1;Parent=gene-L8R42_003923;Dbxref=NCBI_GP:HBQ7391959.1;Name=HBQ7391959.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=L8R42_003923;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=HBQ7391959.1;transl_table=11 DAFVNP010000090.1 tpg gene 9548 10096 . + . ID=gene-L8R42_003924;Name=L8R42_003924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003924 DAFVNP010000090.1 Protein Homology CDS 9548 10096 . + 0 ID=cds-HBQ7391960.1;Parent=gene-L8R42_003924;Dbxref=NCBI_GP:HBQ7391960.1;Name=HBQ7391960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=L8R42_003924;product=cytoplasmic protein;protein_id=HBQ7391960.1;transl_table=11 DAFVNP010000090.1 tpg gene 10093 10767 . + . ID=gene-L8R42_003925;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=L8R42_003925 DAFVNP010000090.1 Protein Homology CDS 10093 10767 . + 0 ID=cds-HBQ7391961.1;Parent=gene-L8R42_003925;Dbxref=NCBI_GP:HBQ7391961.1;Name=HBQ7391961.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=L8R42_003925;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=HBQ7391961.1;transl_table=11 DAFVNP010000090.1 tpg gene 10733 11749 . + . ID=gene-L8R42_003926;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=L8R42_003926 DAFVNP010000090.1 Protein Homology CDS 10733 11749 . + 0 ID=cds-HBQ7391962.1;Parent=gene-L8R42_003926;Dbxref=NCBI_GP:HBQ7391962.1;Name=HBQ7391962.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=L8R42_003926;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=HBQ7391962.1;transl_table=11 DAFVNP010000090.1 tpg gene 11807 12175 . + . ID=gene-L8R42_003927;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=L8R42_003927 DAFVNP010000090.1 Protein Homology CDS 11807 12175 . + 0 ID=cds-HBQ7391963.1;Parent=gene-L8R42_003927;Dbxref=NCBI_GP:HBQ7391963.1;Name=HBQ7391963.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=L8R42_003927;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=HBQ7391963.1;transl_table=11 DAFVNP010000090.1 tpg gene 12160 14205 . + . ID=gene-L8R42_003928;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=L8R42_003928 DAFVNP010000090.1 Protein Homology CDS 12160 14205 . + 0 ID=cds-HBQ7391964.1;Parent=gene-L8R42_003928;Dbxref=NCBI_GP:HBQ7391964.1;Name=HBQ7391964.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=L8R42_003928;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=HBQ7391964.1;transl_table=11 DAFVNP010000090.1 tpg gene 14195 15496 . + . ID=gene-L8R42_003929;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=L8R42_003929 DAFVNP010000090.1 Protein Homology CDS 14195 15496 . + 0 ID=cds-HBQ7391965.1;Parent=gene-L8R42_003929;Dbxref=NCBI_GP:HBQ7391965.1;Name=HBQ7391965.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=L8R42_003929;product=SctN family type III secretion system ATPase SsaN;protein_id=HBQ7391965.1;transl_table=11 DAFVNP010000090.1 tpg gene 15499 15876 . + . ID=gene-L8R42_003930;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=L8R42_003930 DAFVNP010000090.1 Protein Homology CDS 15499 15876 . + 0 ID=cds-HBQ7391966.1;Parent=gene-L8R42_003930;Dbxref=NCBI_GP:HBQ7391966.1;Name=HBQ7391966.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=L8R42_003930;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=HBQ7391966.1;transl_table=11 DAFVNP010000090.1 tpg gene 15857 16231 . + . ID=gene-L8R42_003931;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=L8R42_003931 DAFVNP010000090.1 Protein Homology CDS 15857 16231 . + 0 ID=cds-HBQ7391967.1;Parent=gene-L8R42_003931;Dbxref=NCBI_GP:HBQ7391967.1;Name=HBQ7391967.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=L8R42_003931;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=HBQ7391967.1;transl_table=11 DAFVNP010000090.1 tpg gene 16212 17180 . + . ID=gene-L8R42_003932;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=L8R42_003932 DAFVNP010000090.1 Protein Homology CDS 16212 17180 . + 0 ID=cds-HBQ7391968.1;Parent=gene-L8R42_003932;Dbxref=NCBI_GP:HBQ7391968.1;Name=HBQ7391968.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=L8R42_003932;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=HBQ7391968.1;transl_table=11 DAFVNP010000090.1 tpg gene 17248 17895 . + . ID=gene-L8R42_003933;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=L8R42_003933 DAFVNP010000090.1 Protein Homology CDS 17248 17895 . + 0 ID=cds-HBQ7391969.1;Parent=gene-L8R42_003933;Dbxref=NCBI_GP:HBQ7391969.1;Name=HBQ7391969.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=L8R42_003933;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=HBQ7391969.1;transl_table=11 DAFVNP010000090.1 tpg gene 17892 18158 . + . ID=gene-L8R42_003934;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=L8R42_003934 DAFVNP010000090.1 Protein Homology CDS 17892 18158 . + 0 ID=cds-HBQ7391970.1;Parent=gene-L8R42_003934;Dbxref=NCBI_GP:HBQ7391970.1;Name=HBQ7391970.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=L8R42_003934;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=HBQ7391970.1;transl_table=11 DAFVNP010000090.1 tpg gene 18159 18603 . + . ID=gene-L8R42_003935;Name=ssaT;end_range=18603,.;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=L8R42_003935;partial=true DAFVNP010000090.1 Protein Homology CDS 18159 18603 . + 0 ID=cds-HBQ7391971.1;Parent=gene-L8R42_003935;Dbxref=NCBI_GP:HBQ7391971.1;Name=HBQ7391971.1;end_range=18603,.;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=L8R42_003935;partial=true;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=HBQ7391971.1;transl_table=11 ##sequence-region DAFVNP010000091.1 1 18446 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000091.1 tpg region 1 18446 . + . ID=DAFVNP010000091.1:1..18446;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000091.1 tpg gene 278 712 . + . ID=gene-L8R42_003936;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=L8R42_003936 DAFVNP010000091.1 Protein Homology CDS 278 712 . + 0 ID=cds-HBQ7391972.1;Parent=gene-L8R42_003936;Dbxref=NCBI_GP:HBQ7391972.1;Name=HBQ7391972.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=L8R42_003936;product=universal stress protein UspF;protein_id=HBQ7391972.1;transl_table=11 DAFVNP010000091.1 tpg gene 765 1103 . - . ID=gene-L8R42_003937;Name=L8R42_003937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003937 DAFVNP010000091.1 Protein Homology CDS 765 1103 . - 0 ID=cds-HBQ7391973.1;Parent=gene-L8R42_003937;Dbxref=NCBI_GP:HBQ7391973.1;Name=HBQ7391973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=L8R42_003937;product=EamA family transporter;protein_id=HBQ7391973.1;transl_table=11 DAFVNP010000091.1 tpg gene 1378 4800 . - . ID=gene-L8R42_003938;Name=L8R42_003938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003938 DAFVNP010000091.1 Protein Homology CDS 1378 4800 . - 0 ID=cds-HBQ7391974.1;Parent=gene-L8R42_003938;Dbxref=NCBI_GP:HBQ7391974.1;Name=HBQ7391974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=L8R42_003938;product=DUF4765 family protein;protein_id=HBQ7391974.1;transl_table=11 DAFVNP010000091.1 tpg pseudogene 5230 5436 . + . ID=gene-L8R42_003939;Name=L8R42_003939;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_003939;pseudo=true DAFVNP010000091.1 Protein Homology CDS 5230 5436 . + 0 ID=cds-L8R42_003939;Parent=gene-L8R42_003939;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=L8R42_003939;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DAFVNP010000091.1 tpg gene 5488 6423 . + . ID=gene-L8R42_003940;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=L8R42_003940 DAFVNP010000091.1 Protein Homology CDS 5488 6423 . + 0 ID=cds-HBQ7391975.1;Parent=gene-L8R42_003940;Dbxref=NCBI_GP:HBQ7391975.1;Name=HBQ7391975.1;gbkey=CDS;gene=ttcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=L8R42_003940;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=HBQ7391975.1;transl_table=11 DAFVNP010000091.1 tpg gene 6467 7840 . - . ID=gene-L8R42_003941;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=L8R42_003941 DAFVNP010000091.1 Protein Homology CDS 6467 7840 . - 0 ID=cds-HBQ7391976.1;Parent=gene-L8R42_003941;Dbxref=NCBI_GP:HBQ7391976.1;Name=HBQ7391976.1;gbkey=CDS;gene=dbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=L8R42_003941;product=ATP-dependent RNA helicase DbpA;protein_id=HBQ7391976.1;transl_table=11 DAFVNP010000091.1 tpg gene 8327 9310 . - . ID=gene-L8R42_003942;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=L8R42_003942 DAFVNP010000091.1 Protein Homology CDS 8327 9310 . - 0 ID=cds-HBQ7391977.1;Parent=gene-L8R42_003942;Dbxref=NCBI_GP:HBQ7391977.1;Name=HBQ7391977.1;gbkey=CDS;gene=zntB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=L8R42_003942;product=zinc transporter ZntB;protein_id=HBQ7391977.1;transl_table=11 DAFVNP010000091.1 tpg gene 9456 10610 . - . ID=gene-L8R42_003943;Name=L8R42_003943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003943 DAFVNP010000091.1 Protein Homology CDS 9456 10610 . - 0 ID=cds-HBQ7391978.1;Parent=gene-L8R42_003943;Dbxref=NCBI_GP:HBQ7391978.1;Name=HBQ7391978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=L8R42_003943;product=chemoreceptor protein;protein_id=HBQ7391978.1;transl_table=11 DAFVNP010000091.1 tpg gene 11003 11566 . - . ID=gene-L8R42_003944;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=L8R42_003944 DAFVNP010000091.1 Protein Homology CDS 11003 11566 . - 0 ID=cds-HBQ7391979.1;Parent=gene-L8R42_003944;Dbxref=NCBI_GP:HBQ7391979.1;Name=HBQ7391979.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=L8R42_003944;product=DNA endonuclease SmrA;protein_id=HBQ7391979.1;transl_table=11 DAFVNP010000091.1 tpg gene 11824 12339 . + . ID=gene-L8R42_003945;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=L8R42_003945 DAFVNP010000091.1 Protein Homology CDS 11824 12339 . + 0 ID=cds-HBQ7391980.1;Parent=gene-L8R42_003945;Dbxref=NCBI_GP:HBQ7391980.1;Name=HBQ7391980.1;gbkey=CDS;gene=ogt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=L8R42_003945;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=HBQ7391980.1;transl_table=11 DAFVNP010000091.1 tpg gene 12535 13287 . + . ID=gene-L8R42_003946;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=L8R42_003946 DAFVNP010000091.1 Protein Homology CDS 12535 13287 . + 0 ID=cds-HBQ7391981.1;Parent=gene-L8R42_003946;Dbxref=NCBI_GP:HBQ7391981.1;Name=HBQ7391981.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=L8R42_003946;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=HBQ7391981.1;transl_table=11 DAFVNP010000091.1 tpg gene 13438 14385 . + . ID=gene-L8R42_003947;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=L8R42_003947 DAFVNP010000091.1 Protein Homology CDS 13438 14385 . + 0 ID=cds-HBQ7391982.1;Parent=gene-L8R42_003947;Dbxref=NCBI_GP:HBQ7391982.1;Name=HBQ7391982.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=L8R42_003947;product=universal stress protein UspE;protein_id=HBQ7391982.1;transl_table=11 DAFVNP010000091.1 tpg gene 14440 14694 . - . ID=gene-L8R42_003948;Name=L8R42_003948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003948 DAFVNP010000091.1 Protein Homology CDS 14440 14694 . - 0 ID=cds-HBQ7391983.1;Parent=gene-L8R42_003948;Dbxref=NCBI_GP:HBQ7391983.1;Name=HBQ7391983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=L8R42_003948;product=DUF2534 family protein;protein_id=HBQ7391983.1;transl_table=11 DAFVNP010000091.1 tpg gene 14933 15964 . + . ID=gene-L8R42_003949;Name=L8R42_003949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003949 DAFVNP010000091.1 Protein Homology CDS 14933 15964 . + 0 ID=cds-HBQ7391984.1;Parent=gene-L8R42_003949;Dbxref=NCBI_GP:HBQ7391984.1;Name=HBQ7391984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=L8R42_003949;product=mechanosensitive ion channel family protein;protein_id=HBQ7391984.1;transl_table=11 DAFVNP010000091.1 tpg gene 16050 16652 . - . ID=gene-L8R42_003950;Name=L8R42_003950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003950 DAFVNP010000091.1 Protein Homology CDS 16050 16652 . - 0 ID=cds-HBQ7391985.1;Parent=gene-L8R42_003950;Dbxref=NCBI_GP:HBQ7391985.1;Name=HBQ7391985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=L8R42_003950;product=helix-turn-helix domain-containing protein;protein_id=HBQ7391985.1;transl_table=11 DAFVNP010000091.1 tpg gene 16696 17382 . + . ID=gene-L8R42_003951;Name=L8R42_003951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003951 DAFVNP010000091.1 Protein Homology CDS 16696 17382 . + 0 ID=cds-HBQ7391986.1;Parent=gene-L8R42_003951;Dbxref=NCBI_GP:HBQ7391986.1;Name=HBQ7391986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=L8R42_003951;product=B3/4 domain-containing protein;protein_id=HBQ7391986.1;transl_table=11 DAFVNP010000091.1 tpg gene 17410 17748 . + . ID=gene-L8R42_003952;Name=L8R42_003952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003952 DAFVNP010000091.1 Protein Homology CDS 17410 17748 . + 0 ID=cds-HBQ7391987.1;Parent=gene-L8R42_003952;Dbxref=NCBI_GP:HBQ7391987.1;Name=HBQ7391987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=L8R42_003952;product=hypothetical protein;protein_id=HBQ7391987.1;transl_table=11 DAFVNP010000091.1 tpg gene 17854 18411 . - . ID=gene-L8R42_003953;Name=L8R42_003953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003953 DAFVNP010000091.1 Protein Homology CDS 17854 18411 . - 0 ID=cds-HBQ7391988.1;Parent=gene-L8R42_003953;Dbxref=NCBI_GP:HBQ7391988.1;Name=HBQ7391988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=L8R42_003953;product=peroxiredoxin;protein_id=HBQ7391988.1;transl_table=11 ##sequence-region DAFVNP010000092.1 1 18360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000092.1 tpg region 1 18360 . + . ID=DAFVNP010000092.1:1..18360;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000092.1 tpg gene 43 174 . + . ID=gene-L8R42_003954;Name=L8R42_003954;gbkey=Gene;gene_biotype=ncRNA;locus_tag=L8R42_003954 DAFVNP010000092.1 cmsearch ncRNA 43 174 . + . ID=rna-L8R42_003954;Parent=gene-L8R42_003954;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_003954;product=RtT sRNA DAFVNP010000092.1 cmsearch exon 43 174 . + . ID=exon-L8R42_003954-1;Parent=rna-L8R42_003954;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_003954;product=RtT sRNA DAFVNP010000092.1 tpg gene 277 1806 . - . ID=gene-L8R42_003955;Name=L8R42_003955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003955 DAFVNP010000092.1 Protein Homology CDS 277 1806 . - 0 ID=cds-HBQ7391989.1;Parent=gene-L8R42_003955;Dbxref=NCBI_GP:HBQ7391989.1;Name=HBQ7391989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=L8R42_003955;product=sel1 repeat family protein;protein_id=HBQ7391989.1;transl_table=11 DAFVNP010000092.1 tpg gene 2048 2725 . - . ID=gene-L8R42_003956;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=L8R42_003956 DAFVNP010000092.1 Protein Homology CDS 2048 2725 . - 0 ID=cds-HBQ7391990.1;Parent=gene-L8R42_003956;Dbxref=NCBI_GP:HBQ7391990.1;Name=HBQ7391990.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=L8R42_003956;product=respiratory nitrate reductase subunit gamma;protein_id=HBQ7391990.1;transl_table=11 DAFVNP010000092.1 tpg gene 2725 3435 . - . ID=gene-L8R42_003957;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=L8R42_003957 DAFVNP010000092.1 Protein Homology CDS 2725 3435 . - 0 ID=cds-HBQ7391991.1;Parent=gene-L8R42_003957;Dbxref=NCBI_GP:HBQ7391991.1;Name=HBQ7391991.1;gbkey=CDS;gene=narJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=L8R42_003957;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=HBQ7391991.1;transl_table=11 DAFVNP010000092.1 tpg gene 3432 4967 . - . ID=gene-L8R42_003958;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=L8R42_003958 DAFVNP010000092.1 Protein Homology CDS 3432 4967 . - 0 ID=cds-HBQ7391992.1;Parent=gene-L8R42_003958;Dbxref=NCBI_GP:HBQ7391992.1;Name=HBQ7391992.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=L8R42_003958;product=nitrate reductase subunit beta;protein_id=HBQ7391992.1;transl_table=11 DAFVNP010000092.1 tpg gene 4964 8707 . - . ID=gene-L8R42_003959;Name=L8R42_003959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003959 DAFVNP010000092.1 Protein Homology CDS 4964 8707 . - 0 ID=cds-HBQ7391993.1;Parent=gene-L8R42_003959;Dbxref=NCBI_GP:HBQ7391993.1;Name=HBQ7391993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=L8R42_003959;product=nitrate reductase subunit alpha;protein_id=HBQ7391993.1;transl_table=11 DAFVNP010000092.1 tpg gene 9095 10492 . - . ID=gene-L8R42_003960;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=L8R42_003960 DAFVNP010000092.1 Protein Homology CDS 9095 10492 . - 0 ID=cds-HBQ7391994.1;Parent=gene-L8R42_003960;Dbxref=NCBI_GP:HBQ7391994.1;Name=HBQ7391994.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=L8R42_003960;product=nitrate transporter NarK;protein_id=HBQ7391994.1;transl_table=11 DAFVNP010000092.1 tpg gene 10833 12629 . + . ID=gene-L8R42_003961;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=L8R42_003961 DAFVNP010000092.1 Protein Homology CDS 10833 12629 . + 0 ID=cds-HBQ7391995.1;Parent=gene-L8R42_003961;Dbxref=NCBI_GP:HBQ7391995.1;Name=HBQ7391995.1;gbkey=CDS;gene=narX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=L8R42_003961;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=HBQ7391995.1;transl_table=11 DAFVNP010000092.1 tpg gene 12622 13272 . + . ID=gene-L8R42_003962;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=L8R42_003962 DAFVNP010000092.1 Protein Homology CDS 12622 13272 . + 0 ID=cds-HBQ7391996.1;Parent=gene-L8R42_003962;Dbxref=NCBI_GP:HBQ7391996.1;Name=HBQ7391996.1;gbkey=CDS;gene=narL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=L8R42_003962;product=two-component system response regulator NarL;protein_id=HBQ7391996.1;transl_table=11 DAFVNP010000092.1 tpg gene 13273 14697 . - . ID=gene-L8R42_003963;Name=L8R42_003963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003963 DAFVNP010000092.1 Protein Homology CDS 13273 14697 . - 0 ID=cds-HBQ7391997.1;Parent=gene-L8R42_003963;Dbxref=NCBI_GP:HBQ7391997.1;Name=HBQ7391997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=L8R42_003963;product=YchO/YchP family invasin;protein_id=HBQ7391997.1;transl_table=11 DAFVNP010000092.1 tpg gene 14874 15227 . + . ID=gene-L8R42_003964;Name=L8R42_003964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003964 DAFVNP010000092.1 Protein Homology CDS 14874 15227 . + 0 ID=cds-HBQ7391998.1;Parent=gene-L8R42_003964;Dbxref=NCBI_GP:HBQ7391998.1;Name=HBQ7391998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=L8R42_003964;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=HBQ7391998.1;transl_table=11 DAFVNP010000092.1 tpg gene 15307 15537 . - . ID=gene-L8R42_003965;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=L8R42_003965 DAFVNP010000092.1 Protein Homology CDS 15307 15537 . - 0 ID=cds-HBQ7391999.1;Parent=gene-L8R42_003965;Dbxref=NCBI_GP:HBQ7391999.1;Name=HBQ7391999.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=L8R42_003965;product=putative cation transport regulator ChaB;protein_id=HBQ7391999.1;transl_table=11 DAFVNP010000092.1 tpg gene 15804 16904 . + . ID=gene-L8R42_003966;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=L8R42_003966 DAFVNP010000092.1 Protein Homology CDS 15804 16904 . + 0 ID=cds-HBQ7392000.1;Parent=gene-L8R42_003966;Dbxref=NCBI_GP:HBQ7392000.1;Name=HBQ7392000.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=L8R42_003966;product=sodium-potassium/proton antiporter ChaA;protein_id=HBQ7392000.1;transl_table=11 DAFVNP010000092.1 tpg gene 16958 17812 . - . ID=gene-L8R42_003967;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=L8R42_003967 DAFVNP010000092.1 Protein Homology CDS 16958 17812 . - 0 ID=cds-HBQ7392001.1;Parent=gene-L8R42_003967;Dbxref=NCBI_GP:HBQ7392001.1;Name=HBQ7392001.1;gbkey=CDS;gene=kdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=L8R42_003967;product=3-deoxy-8-phosphooctulonate synthase;protein_id=HBQ7392001.1;transl_table=11 DAFVNP010000092.1 tpg gene 17850 18360 . - . ID=gene-L8R42_003968;Name=L8R42_003968;end_range=18360,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003968;partial=true DAFVNP010000092.1 Protein Homology CDS 17850 18360 . - 1 ID=cds-HBQ7392002.1;Parent=gene-L8R42_003968;Dbxref=NCBI_GP:HBQ7392002.1;Name=HBQ7392002.1;end_range=18360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=L8R42_003968;partial=true;product=tetratricopeptide repeat protein;protein_id=HBQ7392002.1;transl_table=11 ##sequence-region DAFVNP010000093.1 1 18177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000093.1 tpg region 1 18177 . + . ID=DAFVNP010000093.1:1..18177;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000093.1 tpg gene 18 93 . - . ID=gene-L8R42_003969;Name=L8R42_003969;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_003969 DAFVNP010000093.1 tRNAscan-SE tRNA 18 93 . - . ID=rna-L8R42_003969;Parent=gene-L8R42_003969;anticodon=(pos:complement(58..60));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003969;product=tRNA-Gly DAFVNP010000093.1 tRNAscan-SE exon 18 93 . - . ID=exon-L8R42_003969-1;Parent=rna-L8R42_003969;anticodon=(pos:complement(58..60));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_003969;product=tRNA-Gly DAFVNP010000093.1 tpg gene 369 1109 . + . ID=gene-L8R42_003970;Name=L8R42_003970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003970 DAFVNP010000093.1 Protein Homology CDS 369 1109 . + 0 ID=cds-HBQ7392003.1;Parent=gene-L8R42_003970;Dbxref=NCBI_GP:HBQ7392003.1;Name=HBQ7392003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=L8R42_003970;product=arginine ABC transporter substrate-binding protein;protein_id=HBQ7392003.1;transl_table=11 DAFVNP010000093.1 tpg gene 1171 1716 . - . ID=gene-L8R42_003971;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=L8R42_003971 DAFVNP010000093.1 Protein Homology CDS 1171 1716 . - 0 ID=cds-HBQ7392004.1;Parent=gene-L8R42_003971;Dbxref=NCBI_GP:HBQ7392004.1;Name=HBQ7392004.1;gbkey=CDS;gene=orn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=L8R42_003971;product=oligoribonuclease;protein_id=HBQ7392004.1;transl_table=11 DAFVNP010000093.1 tpg gene 1823 2875 . + . ID=gene-L8R42_003972;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=L8R42_003972 DAFVNP010000093.1 Protein Homology CDS 1823 2875 . + 0 ID=cds-HBQ7392005.1;Parent=gene-L8R42_003972;Dbxref=NCBI_GP:HBQ7392005.1;Name=HBQ7392005.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=L8R42_003972;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=HBQ7392005.1;transl_table=11 DAFVNP010000093.1 tpg gene 2967 3935 . + . ID=gene-L8R42_003973;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=L8R42_003973 DAFVNP010000093.1 Protein Homology CDS 2967 3935 . + 0 ID=cds-HBQ7392006.1;Parent=gene-L8R42_003973;Dbxref=NCBI_GP:HBQ7392006.1;Name=HBQ7392006.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;gbkey=CDS;gene=psd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=L8R42_003973;product=phosphatidylserine decarboxylase;protein_id=HBQ7392006.1;transl_table=11 DAFVNP010000093.1 tpg gene 3954 7280 . + . ID=gene-L8R42_003974;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=L8R42_003974 DAFVNP010000093.1 Protein Homology CDS 3954 7280 . + 0 ID=cds-HBQ7392007.1;Parent=gene-L8R42_003974;Dbxref=NCBI_GP:HBQ7392007.1;Name=HBQ7392007.1;gbkey=CDS;gene=mscM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=L8R42_003974;product=miniconductance mechanosensitive channel MscM;protein_id=HBQ7392007.1;transl_table=11 DAFVNP010000093.1 tpg gene 7347 7661 . - . ID=gene-L8R42_003975;Name=L8R42_003975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003975 DAFVNP010000093.1 Protein Homology CDS 7347 7661 . - 0 ID=cds-HBQ7392008.1;Parent=gene-L8R42_003975;Dbxref=NCBI_GP:HBQ7392008.1;Name=HBQ7392008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463210.1;locus_tag=L8R42_003975;product=YjeO family protein;protein_id=HBQ7392008.1;transl_table=11 DAFVNP010000093.1 tpg gene 7713 9215 . - . ID=gene-L8R42_003976;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=L8R42_003976 DAFVNP010000093.1 Protein Homology CDS 7713 9215 . - 0 ID=cds-HBQ7392009.1;Parent=gene-L8R42_003976;Dbxref=NCBI_GP:HBQ7392009.1;Name=HBQ7392009.1;gbkey=CDS;gene=yjeM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=L8R42_003976;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=HBQ7392009.1;transl_table=11 DAFVNP010000093.1 tpg gene 9441 10418 . - . ID=gene-L8R42_003977;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=L8R42_003977 DAFVNP010000093.1 Protein Homology CDS 9441 10418 . - 0 ID=cds-HBQ7392010.1;Parent=gene-L8R42_003977;Dbxref=NCBI_GP:HBQ7392010.1;Name=HBQ7392010.1;gbkey=CDS;gene=epmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=L8R42_003977;product=elongation factor P--(R)-beta-lysine ligase;protein_id=HBQ7392010.1;transl_table=11 DAFVNP010000093.1 tpg gene 10741 12531 . + . ID=gene-L8R42_003978;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=L8R42_003978 DAFVNP010000093.1 Protein Homology CDS 10741 12531 . + 0 ID=cds-HBQ7392011.1;Parent=gene-L8R42_003978;Dbxref=NCBI_GP:HBQ7392011.1;Name=HBQ7392011.1;gbkey=CDS;gene=frdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=L8R42_003978;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=HBQ7392011.1;transl_table=11 DAFVNP010000093.1 tpg gene 12524 13258 . + . ID=gene-L8R42_003979;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=L8R42_003979 DAFVNP010000093.1 Protein Homology CDS 12524 13258 . + 0 ID=cds-HBQ7392012.1;Parent=gene-L8R42_003979;Dbxref=NCBI_GP:HBQ7392012.1;Name=HBQ7392012.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=L8R42_003979;product=fumarate reductase iron-sulfur protein;protein_id=HBQ7392012.1;transl_table=11 DAFVNP010000093.1 tpg gene 13269 13664 . + . ID=gene-L8R42_003980;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=L8R42_003980 DAFVNP010000093.1 Protein Homology CDS 13269 13664 . + 0 ID=cds-HBQ7392013.1;Parent=gene-L8R42_003980;Dbxref=NCBI_GP:HBQ7392013.1;Name=HBQ7392013.1;gbkey=CDS;gene=frdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=L8R42_003980;product=fumarate reductase subunit FrdC;protein_id=HBQ7392013.1;transl_table=11 DAFVNP010000093.1 tpg gene 13675 14034 . + . ID=gene-L8R42_003981;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=L8R42_003981 DAFVNP010000093.1 Protein Homology CDS 13675 14034 . + 0 ID=cds-HBQ7392014.1;Parent=gene-L8R42_003981;Dbxref=NCBI_GP:HBQ7392014.1;Name=HBQ7392014.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=L8R42_003981;product=fumarate reductase subunit FrdD;protein_id=HBQ7392014.1;transl_table=11 DAFVNP010000093.1 tpg gene 14145 14678 . + . ID=gene-L8R42_003982;Name=L8R42_003982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003982 DAFVNP010000093.1 Protein Homology CDS 14145 14678 . + 0 ID=cds-HBQ7392015.1;Parent=gene-L8R42_003982;Dbxref=NCBI_GP:HBQ7392015.1;Name=HBQ7392015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=L8R42_003982;product=lipocalin family protein;protein_id=HBQ7392015.1;transl_table=11 DAFVNP010000093.1 tpg gene 14695 15012 . - . ID=gene-L8R42_003983;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=L8R42_003983 DAFVNP010000093.1 Protein Homology CDS 14695 15012 . - 0 ID=cds-HBQ7392016.1;Parent=gene-L8R42_003983;Dbxref=NCBI_GP:HBQ7392016.1;Name=HBQ7392016.1;gbkey=CDS;gene=sugE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=L8R42_003983;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=HBQ7392016.1;transl_table=11 DAFVNP010000093.1 tpg gene 15269 15856 . + . ID=gene-L8R42_003984;Name=L8R42_003984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003984 DAFVNP010000093.1 Protein Homology CDS 15269 15856 . + 0 ID=cds-HBQ7392017.1;Parent=gene-L8R42_003984;Dbxref=NCBI_GP:HBQ7392017.1;Name=HBQ7392017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=L8R42_003984;product=response regulator transcription factor;protein_id=HBQ7392017.1;transl_table=11 DAFVNP010000093.1 tpg gene 15887 16033 . - . ID=gene-L8R42_003985;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=L8R42_003985 DAFVNP010000093.1 Protein Homology CDS 15887 16033 . - 0 ID=cds-HBQ7392018.1;Parent=gene-L8R42_003985;Dbxref=NCBI_GP:HBQ7392018.1;Name=HBQ7392018.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=L8R42_003985;product=lipoprotein toxin entericidin B;protein_id=HBQ7392018.1;transl_table=11 DAFVNP010000093.1 tpg gene 16141 16275 . - . ID=gene-L8R42_003986;Name=L8R42_003986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003986 DAFVNP010000093.1 Protein Homology CDS 16141 16275 . - 0 ID=cds-HBQ7392019.1;Parent=gene-L8R42_003986;Dbxref=NCBI_GP:HBQ7392019.1;Name=HBQ7392019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463199.2;locus_tag=L8R42_003986;product=entericidin A/B family lipoprotein;protein_id=HBQ7392019.1;transl_table=11 DAFVNP010000093.1 tpg gene 16337 16903 . - . ID=gene-L8R42_003987;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=L8R42_003987 DAFVNP010000093.1 Protein Homology CDS 16337 16903 . - 0 ID=cds-HBQ7392020.1;Parent=gene-L8R42_003987;Dbxref=NCBI_GP:HBQ7392020.1;Name=HBQ7392020.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=L8R42_003987;product=elongation factor P;protein_id=HBQ7392020.1;transl_table=11 DAFVNP010000093.1 tpg gene 16944 17972 . + . ID=gene-L8R42_003988;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=L8R42_003988 DAFVNP010000093.1 Protein Homology CDS 16944 17972 . + 0 ID=cds-HBQ7392021.1;Parent=gene-L8R42_003988;Dbxref=NCBI_GP:HBQ7392021.1;Name=HBQ7392021.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=L8R42_003988;product=EF-P beta-lysylation protein EpmB;protein_id=HBQ7392021.1;transl_table=11 ##sequence-region DAFVNP010000094.1 1 17812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000094.1 tpg region 1 17812 . + . ID=DAFVNP010000094.1:1..17812;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000094.1 tpg gene 265 567 . - . ID=gene-L8R42_003989;Name=L8R42_003989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003989 DAFVNP010000094.1 Protein Homology CDS 265 567 . - 0 ID=cds-HBQ7392022.1;Parent=gene-L8R42_003989;Dbxref=NCBI_GP:HBQ7392022.1;Name=HBQ7392022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000442693.1;locus_tag=L8R42_003989;product=hypothetical protein;protein_id=HBQ7392022.1;transl_table=11 DAFVNP010000094.1 tpg gene 1000 1368 . - . ID=gene-L8R42_003990;Name=L8R42_003990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003990 DAFVNP010000094.1 Protein Homology CDS 1000 1368 . - 0 ID=cds-HBQ7392023.1;Parent=gene-L8R42_003990;Dbxref=NCBI_GP:HBQ7392023.1;Name=HBQ7392023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000537761.1;locus_tag=L8R42_003990;product=hypothetical protein;protein_id=HBQ7392023.1;transl_table=11 DAFVNP010000094.1 tpg gene 1533 2069 . - . ID=gene-L8R42_003991;Name=L8R42_003991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003991 DAFVNP010000094.1 Protein Homology CDS 1533 2069 . - 0 ID=cds-HBQ7392024.1;Parent=gene-L8R42_003991;Dbxref=NCBI_GP:HBQ7392024.1;Name=HBQ7392024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800251.1;locus_tag=L8R42_003991;product=hypothetical protein;protein_id=HBQ7392024.1;transl_table=11 DAFVNP010000094.1 tpg gene 2137 2574 . - . ID=gene-L8R42_003992;Name=L8R42_003992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003992 DAFVNP010000094.1 Protein Homology CDS 2137 2574 . - 0 ID=cds-HBQ7392025.1;Parent=gene-L8R42_003992;Dbxref=NCBI_GP:HBQ7392025.1;Name=HBQ7392025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286108.1;locus_tag=L8R42_003992;product=hypothetical protein;protein_id=HBQ7392025.1;transl_table=11 DAFVNP010000094.1 tpg gene 2619 2915 . - . ID=gene-L8R42_003993;Name=L8R42_003993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003993 DAFVNP010000094.1 Protein Homology CDS 2619 2915 . - 0 ID=cds-HBQ7392026.1;Parent=gene-L8R42_003993;Dbxref=NCBI_GP:HBQ7392026.1;Name=HBQ7392026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000856246.1;locus_tag=L8R42_003993;product=hypothetical protein;protein_id=HBQ7392026.1;transl_table=11 DAFVNP010000094.1 tpg gene 3036 3242 . - . ID=gene-L8R42_003994;Name=L8R42_003994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003994 DAFVNP010000094.1 Protein Homology CDS 3036 3242 . - 0 ID=cds-HBQ7392027.1;Parent=gene-L8R42_003994;Dbxref=NCBI_GP:HBQ7392027.1;Name=HBQ7392027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000893963.1;locus_tag=L8R42_003994;product=hypothetical protein;protein_id=HBQ7392027.1;transl_table=11 DAFVNP010000094.1 tpg gene 3499 3780 . - . ID=gene-L8R42_003995;Name=L8R42_003995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003995 DAFVNP010000094.1 Protein Homology CDS 3499 3780 . - 0 ID=cds-HBQ7392028.1;Parent=gene-L8R42_003995;Dbxref=NCBI_GP:HBQ7392028.1;Name=HBQ7392028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710431.1;locus_tag=L8R42_003995;product=hypothetical protein;protein_id=HBQ7392028.1;transl_table=11 DAFVNP010000094.1 tpg gene 3846 5030 . - . ID=gene-L8R42_003996;Name=L8R42_003996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003996 DAFVNP010000094.1 Protein Homology CDS 3846 5030 . - 0 ID=cds-HBQ7392029.1;Parent=gene-L8R42_003996;Dbxref=NCBI_GP:HBQ7392029.1;Name=HBQ7392029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272971.1;locus_tag=L8R42_003996;product=DNA-binding protein;protein_id=HBQ7392029.1;transl_table=11 DAFVNP010000094.1 tpg gene 5446 5622 . - . ID=gene-L8R42_003997;Name=L8R42_003997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003997 DAFVNP010000094.1 Protein Homology CDS 5446 5622 . - 0 ID=cds-HBQ7392030.1;Parent=gene-L8R42_003997;Dbxref=NCBI_GP:HBQ7392030.1;Name=HBQ7392030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001371930.1;locus_tag=L8R42_003997;product=hypothetical protein;protein_id=HBQ7392030.1;transl_table=11 DAFVNP010000094.1 tpg gene 6132 7076 . + . ID=gene-L8R42_003998;Name=L8R42_003998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003998 DAFVNP010000094.1 Protein Homology CDS 6132 7076 . + 0 ID=cds-HBQ7392031.1;Parent=gene-L8R42_003998;Dbxref=NCBI_GP:HBQ7392031.1;Name=HBQ7392031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778029.1;locus_tag=L8R42_003998;product=DUF5417 domain-containing protein;protein_id=HBQ7392031.1;transl_table=11 DAFVNP010000094.1 tpg gene 7176 7775 . + . ID=gene-L8R42_003999;Name=L8R42_003999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_003999 DAFVNP010000094.1 Protein Homology CDS 7176 7775 . + 0 ID=cds-HBQ7392032.1;Parent=gene-L8R42_003999;Dbxref=NCBI_GP:HBQ7392032.1;Name=HBQ7392032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031421.1;locus_tag=L8R42_003999;product=hypothetical protein;protein_id=HBQ7392032.1;transl_table=11 DAFVNP010000094.1 tpg gene 7835 8185 . + . ID=gene-L8R42_004000;Name=L8R42_004000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004000 DAFVNP010000094.1 Protein Homology CDS 7835 8185 . + 0 ID=cds-HBQ7392033.1;Parent=gene-L8R42_004000;Dbxref=NCBI_GP:HBQ7392033.1;Name=HBQ7392033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743060.1;locus_tag=L8R42_004000;product=hypothetical protein;protein_id=HBQ7392033.1;transl_table=11 DAFVNP010000094.1 tpg gene 8231 8434 . + . ID=gene-L8R42_004001;Name=L8R42_004001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004001 DAFVNP010000094.1 Protein Homology CDS 8231 8434 . + 0 ID=cds-HBQ7392034.1;Parent=gene-L8R42_004001;Dbxref=NCBI_GP:HBQ7392034.1;Name=HBQ7392034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015183.1;locus_tag=L8R42_004001;product=hypothetical protein;protein_id=HBQ7392034.1;transl_table=11 DAFVNP010000094.1 tpg gene 8896 10008 . + . ID=gene-L8R42_004002;Name=L8R42_004002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004002 DAFVNP010000094.1 Protein Homology CDS 8896 10008 . + 0 ID=cds-HBQ7392035.1;Parent=gene-L8R42_004002;Dbxref=NCBI_GP:HBQ7392035.1;Name=HBQ7392035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=L8R42_004002;product=IS4-like element IS421 family transposase;protein_id=HBQ7392035.1;transl_table=11 DAFVNP010000094.1 tpg gene 10203 10361 . - . ID=gene-L8R42_004003;Name=L8R42_004003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004003 DAFVNP010000094.1 Protein Homology CDS 10203 10361 . - 0 ID=cds-HBQ7392036.1;Parent=gene-L8R42_004003;Dbxref=NCBI_GP:HBQ7392036.1;Name=HBQ7392036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001447866.1;locus_tag=L8R42_004003;product=type I toxin-antitoxin system Hok family toxin;protein_id=HBQ7392036.1;transl_table=11 DAFVNP010000094.1 tpg gene 10460 11829 . - . ID=gene-L8R42_004004;Name=L8R42_004004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004004 DAFVNP010000094.1 Protein Homology CDS 11349 11829 . - 0 ID=cds-HBQ7392037.1;Parent=gene-L8R42_004004;Dbxref=NCBI_GP:HBQ7392037.1;Name=HBQ7392037.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=L8R42_004004;product=IS3 family transposase;protein_id=HBQ7392037.1;transl_table=11 DAFVNP010000094.1 Protein Homology CDS 10460 11349 . - 2 ID=cds-HBQ7392037.1;Parent=gene-L8R42_004004;Dbxref=NCBI_GP:HBQ7392037.1;Name=HBQ7392037.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=L8R42_004004;product=IS3 family transposase;protein_id=HBQ7392037.1;transl_table=11 DAFVNP010000094.1 tpg gene 12162 12767 . - . ID=gene-L8R42_004005;Name=L8R42_004005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004005 DAFVNP010000094.1 Protein Homology CDS 12162 12767 . - 0 ID=cds-HBQ7392038.1;Parent=gene-L8R42_004005;Dbxref=NCBI_GP:HBQ7392038.1;Name=HBQ7392038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137794.1;locus_tag=L8R42_004005;product=hypothetical protein;protein_id=HBQ7392038.1;transl_table=11 DAFVNP010000094.1 tpg gene 12983 13264 . - . ID=gene-L8R42_004006;Name=L8R42_004006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004006 DAFVNP010000094.1 Protein Homology CDS 12983 13264 . - 0 ID=cds-HBQ7392039.1;Parent=gene-L8R42_004006;Dbxref=NCBI_GP:HBQ7392039.1;Name=HBQ7392039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703843.1;locus_tag=L8R42_004006;product=hypothetical protein;protein_id=HBQ7392039.1;transl_table=11 DAFVNP010000094.1 tpg gene 13639 13950 . - . ID=gene-L8R42_004007;Name=L8R42_004007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004007 DAFVNP010000094.1 Protein Homology CDS 13639 13950 . - 0 ID=cds-HBQ7392040.1;Parent=gene-L8R42_004007;Dbxref=NCBI_GP:HBQ7392040.1;Name=HBQ7392040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001424621.1;locus_tag=L8R42_004007;product=hypothetical protein;protein_id=HBQ7392040.1;transl_table=11 DAFVNP010000094.1 tpg gene 14173 14373 . - . ID=gene-L8R42_004008;Name=L8R42_004008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004008 DAFVNP010000094.1 Protein Homology CDS 14173 14373 . - 0 ID=cds-HBQ7392041.1;Parent=gene-L8R42_004008;Dbxref=NCBI_GP:HBQ7392041.1;Name=HBQ7392041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814953.1;locus_tag=L8R42_004008;product=hypothetical protein;protein_id=HBQ7392041.1;transl_table=11 DAFVNP010000094.1 tpg gene 14413 14637 . - . ID=gene-L8R42_004009;Name=L8R42_004009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004009 DAFVNP010000094.1 Protein Homology CDS 14413 14637 . - 0 ID=cds-HBQ7392042.1;Parent=gene-L8R42_004009;Dbxref=NCBI_GP:HBQ7392042.1;Name=HBQ7392042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551491.1;locus_tag=L8R42_004009;product=hypothetical protein;protein_id=HBQ7392042.1;transl_table=11 DAFVNP010000094.1 tpg gene 14692 14895 . - . ID=gene-L8R42_004010;Name=L8R42_004010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004010 DAFVNP010000094.1 Protein Homology CDS 14692 14895 . - 0 ID=cds-HBQ7392043.1;Parent=gene-L8R42_004010;Dbxref=NCBI_GP:HBQ7392043.1;Name=HBQ7392043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000781547.1;locus_tag=L8R42_004010;product=hypothetical protein;protein_id=HBQ7392043.1;transl_table=11 DAFVNP010000094.1 tpg gene 15448 15939 . - . ID=gene-L8R42_004011;Name=L8R42_004011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004011 DAFVNP010000094.1 Protein Homology CDS 15448 15939 . - 0 ID=cds-HBQ7392044.1;Parent=gene-L8R42_004011;Dbxref=NCBI_GP:HBQ7392044.1;Name=HBQ7392044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001439478.1;locus_tag=L8R42_004011;product=DUF3085 domain-containing protein;protein_id=HBQ7392044.1;transl_table=11 DAFVNP010000094.1 tpg gene 15944 16255 . - . ID=gene-L8R42_004012;Name=L8R42_004012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004012 DAFVNP010000094.1 Protein Homology CDS 15944 16255 . - 0 ID=cds-HBQ7392045.1;Parent=gene-L8R42_004012;Dbxref=NCBI_GP:HBQ7392045.1;Name=HBQ7392045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165365.1;locus_tag=L8R42_004012;product=DUF957 domain-containing protein;protein_id=HBQ7392045.1;transl_table=11 DAFVNP010000094.1 tpg gene 16771 17091 . - . ID=gene-L8R42_004013;Name=L8R42_004013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004013 DAFVNP010000094.1 Protein Homology CDS 16771 17091 . - 0 ID=cds-HBQ7392046.1;Parent=gene-L8R42_004013;Dbxref=NCBI_GP:HBQ7392046.1;Name=HBQ7392046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133831.1;locus_tag=L8R42_004013;product=hypothetical protein;protein_id=HBQ7392046.1;transl_table=11 DAFVNP010000094.1 tpg gene 17271 17498 . - . ID=gene-L8R42_004014;Name=L8R42_004014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004014 DAFVNP010000094.1 Protein Homology CDS 17271 17498 . - 0 ID=cds-HBQ7392047.1;Parent=gene-L8R42_004014;Dbxref=NCBI_GP:HBQ7392047.1;Name=HBQ7392047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276410.1;locus_tag=L8R42_004014;product=hypothetical protein;protein_id=HBQ7392047.1;transl_table=11 ##sequence-region DAFVNP010000095.1 1 17700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000095.1 tpg region 1 17700 . + . ID=DAFVNP010000095.1:1..17700;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000095.1 tpg gene 1 141 . + . ID=gene-L8R42_004015;Name=L8R42_004015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004015;partial=true;start_range=.,1 DAFVNP010000095.1 Protein Homology CDS 1 141 . + 0 ID=cds-HBQ7392048.1;Parent=gene-L8R42_004015;Dbxref=NCBI_GP:HBQ7392048.1;Name=HBQ7392048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=L8R42_004015;partial=true;product=4Fe-4S binding protein;protein_id=HBQ7392048.1;start_range=.,1;transl_table=11 DAFVNP010000095.1 tpg gene 216 1226 . - . ID=gene-L8R42_004016;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=L8R42_004016 DAFVNP010000095.1 Protein Homology CDS 216 1226 . - 0 ID=cds-HBQ7392049.1;Parent=gene-L8R42_004016;Dbxref=NCBI_GP:HBQ7392049.1;Name=HBQ7392049.1;gbkey=CDS;gene=mglC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=L8R42_004016;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=HBQ7392049.1;transl_table=11 DAFVNP010000095.1 tpg gene 1242 2762 . - . ID=gene-L8R42_004017;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=L8R42_004017 DAFVNP010000095.1 Protein Homology CDS 1242 2762 . - 0 ID=cds-HBQ7392050.1;Parent=gene-L8R42_004017;Dbxref=NCBI_GP:HBQ7392050.1;Name=HBQ7392050.1;gbkey=CDS;gene=mglA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=L8R42_004017;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=HBQ7392050.1;transl_table=11 DAFVNP010000095.1 tpg gene 2896 3894 . - . ID=gene-L8R42_004018;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=L8R42_004018 DAFVNP010000095.1 Protein Homology CDS 2896 3894 . - 0 ID=cds-HBQ7392051.1;Parent=gene-L8R42_004018;Dbxref=NCBI_GP:HBQ7392051.1;Name=HBQ7392051.1;gbkey=CDS;gene=mglB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=L8R42_004018;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=HBQ7392051.1;transl_table=11 DAFVNP010000095.1 tpg gene 4393 5415 . - . ID=gene-L8R42_004019;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=L8R42_004019 DAFVNP010000095.1 Protein Homology CDS 4393 5415 . - 0 ID=cds-HBQ7392052.1;Parent=gene-L8R42_004019;Dbxref=NCBI_GP:HBQ7392052.1;Name=HBQ7392052.1;gbkey=CDS;gene=galS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=L8R42_004019;product=HTH-type transcriptional regulator GalS;protein_id=HBQ7392052.1;transl_table=11 DAFVNP010000095.1 tpg gene 5565 6707 . - . ID=gene-L8R42_004020;Name=L8R42_004020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004020 DAFVNP010000095.1 Protein Homology CDS 5565 6707 . - 0 ID=cds-HBQ7392053.1;Parent=gene-L8R42_004020;Dbxref=NCBI_GP:HBQ7392053.1;Name=HBQ7392053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=L8R42_004020;product=DUF418 family protein;protein_id=HBQ7392053.1;transl_table=11 DAFVNP010000095.1 tpg gene 6722 7390 . - . ID=gene-L8R42_004021;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=L8R42_004021 DAFVNP010000095.1 Protein Homology CDS 6722 7390 . - 0 ID=cds-HBQ7392054.1;Parent=gene-L8R42_004021;Dbxref=NCBI_GP:HBQ7392054.1;Name=HBQ7392054.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=L8R42_004021;product=GTP cyclohydrolase I FolE;protein_id=HBQ7392054.1;transl_table=11 DAFVNP010000095.1 tpg gene 7720 8577 . + . ID=gene-L8R42_004022;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=L8R42_004022 DAFVNP010000095.1 Protein Homology CDS 7720 8577 . + 0 ID=cds-HBQ7392055.1;Parent=gene-L8R42_004022;Dbxref=NCBI_GP:HBQ7392055.1;Name=HBQ7392055.1;gbkey=CDS;gene=fghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=L8R42_004022;product=S-formylglutathione hydrolase;protein_id=HBQ7392055.1;transl_table=11 DAFVNP010000095.1 tpg gene 8566 8955 . - . ID=gene-L8R42_004023;Name=L8R42_004023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004023 DAFVNP010000095.1 Protein Homology CDS 8566 8955 . - 0 ID=cds-HBQ7392056.1;Parent=gene-L8R42_004023;Dbxref=NCBI_GP:HBQ7392056.1;Name=HBQ7392056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=L8R42_004023;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7392056.1;transl_table=11 DAFVNP010000095.1 tpg gene 8960 10327 . - . ID=gene-L8R42_004024;Name=L8R42_004024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004024 DAFVNP010000095.1 Protein Homology CDS 8960 10327 . - 0 ID=cds-HBQ7392057.1;Parent=gene-L8R42_004024;Dbxref=NCBI_GP:HBQ7392057.1;Name=HBQ7392057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=L8R42_004024;product=L-serine ammonia-lyase;protein_id=HBQ7392057.1;transl_table=11 DAFVNP010000095.1 tpg gene 10544 11431 . + . ID=gene-L8R42_004025;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=L8R42_004025 DAFVNP010000095.1 Protein Homology CDS 10544 11431 . + 0 ID=cds-HBQ7392058.1;Parent=gene-L8R42_004025;Dbxref=NCBI_GP:HBQ7392058.1;Name=HBQ7392058.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=L8R42_004025;product=phosphoserine phosphatase SerB;protein_id=HBQ7392058.1;transl_table=11 DAFVNP010000095.1 tpg gene 11464 12786 . + . ID=gene-L8R42_004026;Name=L8R42_004026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004026 DAFVNP010000095.1 Protein Homology CDS 11464 12786 . + 0 ID=cds-HBQ7392059.1;Parent=gene-L8R42_004026;Dbxref=NCBI_GP:HBQ7392059.1;Name=HBQ7392059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=L8R42_004026;product=MFS transporter;protein_id=HBQ7392059.1;transl_table=11 DAFVNP010000095.1 tpg gene 12830 14821 . - . ID=gene-L8R42_004027;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=L8R42_004027 DAFVNP010000095.1 Protein Homology CDS 12830 14821 . - 0 ID=cds-HBQ7392060.1;Parent=gene-L8R42_004027;Dbxref=NCBI_GP:HBQ7392060.1;Name=HBQ7392060.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=L8R42_004027;product=catecholate siderophore receptor CirA;protein_id=HBQ7392060.1;transl_table=11 DAFVNP010000095.1 tpg gene 15167 16636 . - . ID=gene-L8R42_004028;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=L8R42_004028 DAFVNP010000095.1 Protein Homology CDS 15167 16636 . - 0 ID=cds-HBQ7392061.1;Parent=gene-L8R42_004028;Dbxref=NCBI_GP:HBQ7392061.1;Name=HBQ7392061.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=L8R42_004028;product=lysine-specific permease;protein_id=HBQ7392061.1;transl_table=11 DAFVNP010000095.1 tpg gene 16826 17689 . - . ID=gene-L8R42_004029;Name=L8R42_004029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004029 DAFVNP010000095.1 Protein Homology CDS 16826 17689 . - 0 ID=cds-HBQ7392062.1;Parent=gene-L8R42_004029;Dbxref=NCBI_GP:HBQ7392062.1;Name=HBQ7392062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=L8R42_004029;product=LysR family transcriptional regulator;protein_id=HBQ7392062.1;transl_table=11 ##sequence-region DAFVNP010000096.1 1 16938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000096.1 tpg region 1 16938 . + . ID=DAFVNP010000096.1:1..16938;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000096.1 tpg gene 1 1006 . - . ID=gene-L8R42_004030;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=L8R42_004030;partial=true;start_range=.,1 DAFVNP010000096.1 Protein Homology CDS 1 1006 . - 0 ID=cds-HBQ7392063.1;Parent=gene-L8R42_004030;Dbxref=NCBI_GP:HBQ7392063.1;Name=HBQ7392063.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=L8R42_004030;partial=true;product=SPI-2 type III secretion system protein SpiA;protein_id=HBQ7392063.1;start_range=.,1;transl_table=11 DAFVNP010000096.1 tpg gene 1008 1409 . - . ID=gene-L8R42_004031;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=L8R42_004031 DAFVNP010000096.1 Protein Homology CDS 1008 1409 . - 0 ID=cds-HBQ7392064.1;Parent=gene-L8R42_004031;Dbxref=NCBI_GP:HBQ7392064.1;Name=HBQ7392064.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=L8R42_004031;product=SPI-2 type III secretion system protein SpiC;protein_id=HBQ7392064.1;transl_table=11 DAFVNP010000096.1 tpg gene 1810 4572 . + . ID=gene-L8R42_004032;Name=L8R42_004032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004032 DAFVNP010000096.1 Protein Homology CDS 1810 4572 . + 0 ID=cds-HBQ7392065.1;Parent=gene-L8R42_004032;Dbxref=NCBI_GP:HBQ7392065.1;Name=HBQ7392065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=L8R42_004032;product=two component system sensor kinase;protein_id=HBQ7392065.1;transl_table=11 DAFVNP010000096.1 tpg gene 4603 5241 . + . ID=gene-L8R42_004033;Name=L8R42_004033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004033 DAFVNP010000096.1 Protein Homology CDS 4603 5241 . + 0 ID=cds-HBQ7392066.1;Parent=gene-L8R42_004033;Dbxref=NCBI_GP:HBQ7392066.1;Name=HBQ7392066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=L8R42_004033;product=two component system response regulator;protein_id=HBQ7392066.1;transl_table=11 DAFVNP010000096.1 tpg gene 5420 6148 . + . ID=gene-L8R42_004034;Name=L8R42_004034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004034 DAFVNP010000096.1 Protein Homology CDS 5420 6148 . + 0 ID=cds-HBQ7392067.1;Parent=gene-L8R42_004034;Dbxref=NCBI_GP:HBQ7392067.1;Name=HBQ7392067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=L8R42_004034;product=MerR family transcriptional regulator;protein_id=HBQ7392067.1;transl_table=11 DAFVNP010000096.1 tpg gene 6320 7279 . + . ID=gene-L8R42_004035;Name=L8R42_004035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004035 DAFVNP010000096.1 Protein Homology CDS 6320 7279 . + 0 ID=cds-HBQ7392068.1;Parent=gene-L8R42_004035;Dbxref=NCBI_GP:HBQ7392068.1;Name=HBQ7392068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=L8R42_004035;product=DUF523 and DUF1722 domain-containing protein;protein_id=HBQ7392068.1;transl_table=11 DAFVNP010000096.1 tpg gene 7375 7587 . - . ID=gene-L8R42_004036;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=L8R42_004036 DAFVNP010000096.1 Protein Homology CDS 7375 7587 . - 0 ID=cds-HBQ7392069.1;Parent=gene-L8R42_004036;Dbxref=NCBI_GP:HBQ7392069.1;Name=HBQ7392069.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=L8R42_004036;product=fumarate hydratase FumD;protein_id=HBQ7392069.1;transl_table=11 DAFVNP010000096.1 tpg gene 7685 8305 . - . ID=gene-L8R42_004037;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=L8R42_004037 DAFVNP010000096.1 Protein Homology CDS 7685 8305 . - 0 ID=cds-HBQ7392070.1;Parent=gene-L8R42_004037;Dbxref=NCBI_GP:HBQ7392070.1;Name=HBQ7392070.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=L8R42_004037;product=two-component system response regulator TtrR;protein_id=HBQ7392070.1;transl_table=11 DAFVNP010000096.1 tpg gene 8280 10058 . - . ID=gene-L8R42_004038;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=L8R42_004038 DAFVNP010000096.1 Protein Homology CDS 8280 10058 . - 0 ID=cds-HBQ7392071.1;Parent=gene-L8R42_004038;Dbxref=NCBI_GP:HBQ7392071.1;Name=HBQ7392071.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=L8R42_004038;product=two-component system sensor histidine kinase TtrS;protein_id=HBQ7392071.1;transl_table=11 DAFVNP010000096.1 tpg gene 10222 10974 . + . ID=gene-L8R42_004039;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=L8R42_004039 DAFVNP010000096.1 Protein Homology CDS 10222 10974 . + 0 ID=cds-HBQ7392072.1;Parent=gene-L8R42_004039;Dbxref=NCBI_GP:HBQ7392072.1;Name=HBQ7392072.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460350.1;locus_tag=L8R42_004039;product=tetrathionate reductase subunit TtrB;protein_id=HBQ7392072.1;transl_table=11 DAFVNP010000096.1 tpg gene 10975 11997 . + . ID=gene-L8R42_004040;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=L8R42_004040 DAFVNP010000096.1 Protein Homology CDS 10975 11997 . + 0 ID=cds-HBQ7392073.1;Parent=gene-L8R42_004040;Dbxref=NCBI_GP:HBQ7392073.1;Name=HBQ7392073.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=L8R42_004040;product=tetrathionate reductase subunit TtrC;protein_id=HBQ7392073.1;transl_table=11 DAFVNP010000096.1 tpg gene 11990 15052 . + . ID=gene-L8R42_004041;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=L8R42_004041 DAFVNP010000096.1 Protein Homology CDS 11990 15052 . + 0 ID=cds-HBQ7392074.1;Parent=gene-L8R42_004041;Dbxref=NCBI_GP:HBQ7392074.1;Name=HBQ7392074.1;gbkey=CDS;gene=ttrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=L8R42_004041;product=tetrathionate reductase subunit TtrA;protein_id=HBQ7392074.1;transl_table=11 DAFVNP010000096.1 tpg gene 15375 16601 . + . ID=gene-L8R42_004042;Name=L8R42_004042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004042 DAFVNP010000096.1 Protein Homology CDS 15375 16601 . + 0 ID=cds-HBQ7392075.1;Parent=gene-L8R42_004042;Dbxref=NCBI_GP:HBQ7392075.1;Name=HBQ7392075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=L8R42_004042;product=DeoR family transcriptional regulator;protein_id=HBQ7392075.1;transl_table=11 DAFVNP010000096.1 tpg gene 16613 16938 . + . ID=gene-L8R42_004043;Name=L8R42_004043;end_range=16938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004043;partial=true DAFVNP010000096.1 Protein Homology CDS 16613 16938 . + 0 ID=cds-HBQ7392076.1;Parent=gene-L8R42_004043;Dbxref=NCBI_GP:HBQ7392076.1;Name=HBQ7392076.1;end_range=16938,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=L8R42_004043;partial=true;product=cytoplasmic protein;protein_id=HBQ7392076.1;transl_table=11 ##sequence-region DAFVNP010000097.1 1 16937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000097.1 tpg region 1 16937 . + . ID=DAFVNP010000097.1:1..16937;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000097.1 tpg gene 447 1007 . + . ID=gene-L8R42_004044;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=L8R42_004044 DAFVNP010000097.1 Protein Homology CDS 447 1007 . + 0 ID=cds-HBQ7392077.1;Parent=gene-L8R42_004044;Dbxref=NCBI_GP:HBQ7392077.1;Name=HBQ7392077.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=L8R42_004044;product=fimbrial major subunit StfA;protein_id=HBQ7392077.1;transl_table=11 DAFVNP010000097.1 tpg gene 1093 3750 . + . ID=gene-L8R42_004045;Name=L8R42_004045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004045 DAFVNP010000097.1 Protein Homology CDS 1093 3750 . + 0 ID=cds-HBQ7392078.1;Parent=gene-L8R42_004045;Dbxref=NCBI_GP:HBQ7392078.1;Name=HBQ7392078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=L8R42_004045;product=fimbrial biogenesis outer membrane usher protein;protein_id=HBQ7392078.1;transl_table=11 DAFVNP010000097.1 tpg gene 3768 4520 . + . ID=gene-L8R42_004046;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=L8R42_004046 DAFVNP010000097.1 Protein Homology CDS 3768 4520 . + 0 ID=cds-HBQ7392079.1;Parent=gene-L8R42_004046;Dbxref=NCBI_GP:HBQ7392079.1;Name=HBQ7392079.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=L8R42_004046;product=fimbrial chaperone StfD;protein_id=HBQ7392079.1;transl_table=11 DAFVNP010000097.1 tpg gene 4539 5051 . + . ID=gene-L8R42_004047;Name=L8R42_004047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004047 DAFVNP010000097.1 Protein Homology CDS 4539 5051 . + 0 ID=cds-HBQ7392080.1;Parent=gene-L8R42_004047;Dbxref=NCBI_GP:HBQ7392080.1;Name=HBQ7392080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=L8R42_004047;product=fimbrial protein;protein_id=HBQ7392080.1;transl_table=11 DAFVNP010000097.1 tpg gene 5048 5524 . + . ID=gene-L8R42_004048;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=L8R42_004048 DAFVNP010000097.1 Protein Homology CDS 5048 5524 . + 0 ID=cds-HBQ7392081.1;Parent=gene-L8R42_004048;Dbxref=NCBI_GP:HBQ7392081.1;Name=HBQ7392081.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=L8R42_004048;product=fimbrial minor subunit StfF;protein_id=HBQ7392081.1;transl_table=11 DAFVNP010000097.1 tpg gene 5524 6054 . + . ID=gene-L8R42_004049;Name=L8R42_004049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004049 DAFVNP010000097.1 Protein Homology CDS 5524 6054 . + 0 ID=cds-HBQ7392082.1;Parent=gene-L8R42_004049;Dbxref=NCBI_GP:HBQ7392082.1;Name=HBQ7392082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=L8R42_004049;product=fimbrial protein;protein_id=HBQ7392082.1;transl_table=11 DAFVNP010000097.1 tpg gene 6054 6893 . + . ID=gene-L8R42_004050;Name=L8R42_004050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004050 DAFVNP010000097.1 Protein Homology CDS 6054 6893 . + 0 ID=cds-HBQ7392083.1;Parent=gene-L8R42_004050;Dbxref=NCBI_GP:HBQ7392083.1;Name=HBQ7392083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=L8R42_004050;product=YfcO family protein;protein_id=HBQ7392083.1;transl_table=11 DAFVNP010000097.1 tpg gene 6992 8272 . - . ID=gene-L8R42_004051;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=L8R42_004051 DAFVNP010000097.1 Protein Homology CDS 6992 8272 . - 0 ID=cds-HBQ7392084.1;Parent=gene-L8R42_004051;Dbxref=NCBI_GP:HBQ7392084.1;Name=HBQ7392084.1;gbkey=CDS;gene=hemL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=L8R42_004051;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=HBQ7392084.1;transl_table=11 DAFVNP010000097.1 tpg gene 8442 9863 . + . ID=gene-L8R42_004052;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=L8R42_004052 DAFVNP010000097.1 Protein Homology CDS 8442 9863 . + 0 ID=cds-HBQ7392085.1;Parent=gene-L8R42_004052;Dbxref=NCBI_GP:HBQ7392085.1;Name=HBQ7392085.1;gbkey=CDS;gene=clcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=L8R42_004052;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=HBQ7392085.1;transl_table=11 DAFVNP010000097.1 tpg gene 9945 10289 . + . ID=gene-L8R42_004053;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=L8R42_004053 DAFVNP010000097.1 Protein Homology CDS 9945 10289 . + 0 ID=cds-HBQ7392086.1;Parent=gene-L8R42_004053;Dbxref=NCBI_GP:HBQ7392086.1;Name=HBQ7392086.1;gbkey=CDS;gene=erpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=L8R42_004053;product=iron-sulfur cluster insertion protein ErpA;protein_id=HBQ7392086.1;transl_table=11 DAFVNP010000097.1 tpg gene 10390 11013 . - . ID=gene-L8R42_004054;Name=L8R42_004054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004054 DAFVNP010000097.1 Protein Homology CDS 10390 11013 . - 0 ID=cds-HBQ7392087.1;Parent=gene-L8R42_004054;Dbxref=NCBI_GP:HBQ7392087.1;Name=HBQ7392087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=L8R42_004054;product=TRIC cation channel family protein;protein_id=HBQ7392087.1;transl_table=11 DAFVNP010000097.1 tpg gene 11050 11850 . - . ID=gene-L8R42_004055;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=L8R42_004055 DAFVNP010000097.1 Protein Homology CDS 11050 11850 . - 0 ID=cds-HBQ7392088.1;Parent=gene-L8R42_004055;Dbxref=NCBI_GP:HBQ7392088.1;Name=HBQ7392088.1;gbkey=CDS;gene=btuF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=L8R42_004055;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=HBQ7392088.1;transl_table=11 DAFVNP010000097.1 tpg gene 11843 12541 . - . ID=gene-L8R42_004056;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=L8R42_004056 DAFVNP010000097.1 Protein Homology CDS 11843 12541 . - 0 ID=cds-HBQ7392089.1;Parent=gene-L8R42_004056;Dbxref=NCBI_GP:HBQ7392089.1;Name=HBQ7392089.1;gbkey=CDS;gene=mtnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=L8R42_004056;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=HBQ7392089.1;transl_table=11 DAFVNP010000097.1 tpg gene 12626 14143 . + . ID=gene-L8R42_004057;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=L8R42_004057 DAFVNP010000097.1 Protein Homology CDS 12626 14143 . + 0 ID=cds-HBQ7392090.1;Parent=gene-L8R42_004057;Dbxref=NCBI_GP:HBQ7392090.1;Name=HBQ7392090.1;gbkey=CDS;gene=dgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=L8R42_004057;product=dGTPase;protein_id=HBQ7392090.1;transl_table=11 DAFVNP010000097.1 tpg gene 14273 15691 . + . ID=gene-L8R42_004058;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=L8R42_004058 DAFVNP010000097.1 Protein Homology CDS 14273 15691 . + 0 ID=cds-HBQ7392091.1;Parent=gene-L8R42_004058;Dbxref=NCBI_GP:HBQ7392091.1;Name=HBQ7392091.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=L8R42_004058;product=serine endoprotease DegP;protein_id=HBQ7392091.1;transl_table=11 DAFVNP010000097.1 tpg gene 15844 16937 . + . ID=gene-L8R42_004059;Name=L8R42_004059;end_range=16937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004059;partial=true DAFVNP010000097.1 Protein Homology CDS 15844 16937 . + 0 ID=cds-HBQ7392092.1;Parent=gene-L8R42_004059;Dbxref=NCBI_GP:HBQ7392092.1;Name=HBQ7392092.1;end_range=16937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=L8R42_004059;partial=true;product=CdaR family transcriptional regulator;protein_id=HBQ7392092.1;transl_table=11 ##sequence-region DAFVNP010000098.1 1 16723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000098.1 tpg region 1 16723 . + . ID=DAFVNP010000098.1:1..16723;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000098.1 tpg gene 203 2302 . + . ID=gene-L8R42_004060;Name=L8R42_004060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004060 DAFVNP010000098.1 Protein Homology CDS 203 2302 . + 0 ID=cds-HBQ7392093.1;Parent=gene-L8R42_004060;Dbxref=NCBI_GP:HBQ7392093.1;Name=HBQ7392093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=L8R42_004060;product=chitinase;protein_id=HBQ7392093.1;transl_table=11 DAFVNP010000098.1 tpg gene 2395 5391 . + . ID=gene-L8R42_004061;Name=L8R42_004061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004061 DAFVNP010000098.1 Protein Homology CDS 2395 5391 . + 0 ID=cds-HBQ7392094.1;Parent=gene-L8R42_004061;Dbxref=NCBI_GP:HBQ7392094.1;Name=HBQ7392094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=L8R42_004061;product=chitinase;protein_id=HBQ7392094.1;transl_table=11 DAFVNP010000098.1 tpg gene 5672 6376 . + . ID=gene-L8R42_004062;Name=L8R42_004062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004062 DAFVNP010000098.1 Protein Homology CDS 5672 6376 . + 0 ID=cds-HBQ7392095.1;Parent=gene-L8R42_004062;Dbxref=NCBI_GP:HBQ7392095.1;Name=HBQ7392095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=L8R42_004062;product=helix-turn-helix domain-containing protein;protein_id=HBQ7392095.1;transl_table=11 DAFVNP010000098.1 tpg gene 6806 7348 . + . ID=gene-L8R42_004063;Name=L8R42_004063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004063 DAFVNP010000098.1 Protein Homology CDS 6806 7348 . + 0 ID=cds-HBQ7392096.1;Parent=gene-L8R42_004063;Dbxref=NCBI_GP:HBQ7392096.1;Name=HBQ7392096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=L8R42_004063;product=fimbrial protein BcfA;protein_id=HBQ7392096.1;transl_table=11 DAFVNP010000098.1 tpg gene 7449 8135 . + . ID=gene-L8R42_004064;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=L8R42_004064 DAFVNP010000098.1 Protein Homology CDS 7449 8135 . + 0 ID=cds-HBQ7392097.1;Parent=gene-L8R42_004064;Dbxref=NCBI_GP:HBQ7392097.1;Name=HBQ7392097.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=L8R42_004064;product=fimbrial biogenesis chaperone BcfB;protein_id=HBQ7392097.1;transl_table=11 DAFVNP010000098.1 tpg gene 8140 10761 . + . ID=gene-L8R42_004065;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=L8R42_004065 DAFVNP010000098.1 Protein Homology CDS 8140 10761 . + 0 ID=cds-HBQ7392098.1;Parent=gene-L8R42_004065;Dbxref=NCBI_GP:HBQ7392098.1;Name=HBQ7392098.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=L8R42_004065;product=fimbrial usher BcfC;protein_id=HBQ7392098.1;transl_table=11 DAFVNP010000098.1 tpg gene 10762 11769 . + . ID=gene-L8R42_004066;Name=L8R42_004066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004066 DAFVNP010000098.1 Protein Homology CDS 10762 11769 . + 0 ID=cds-HBQ7392099.1;Parent=gene-L8R42_004066;Dbxref=NCBI_GP:HBQ7392099.1;Name=HBQ7392099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=L8R42_004066;product=fimbrial protein BcfD;protein_id=HBQ7392099.1;transl_table=11 DAFVNP010000098.1 tpg gene 11770 12315 . + . ID=gene-L8R42_004067;Name=L8R42_004067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004067 DAFVNP010000098.1 Protein Homology CDS 11770 12315 . + 0 ID=cds-HBQ7392100.1;Parent=gene-L8R42_004067;Dbxref=NCBI_GP:HBQ7392100.1;Name=HBQ7392100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=L8R42_004067;product=fimbrial protein BcfE;protein_id=HBQ7392100.1;transl_table=11 DAFVNP010000098.1 tpg gene 12331 12849 . + . ID=gene-L8R42_004068;Name=L8R42_004068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004068 DAFVNP010000098.1 Protein Homology CDS 12331 12849 . + 0 ID=cds-HBQ7392101.1;Parent=gene-L8R42_004068;Dbxref=NCBI_GP:HBQ7392101.1;Name=HBQ7392101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=L8R42_004068;product=fimbrial protein BcfF;protein_id=HBQ7392101.1;transl_table=11 DAFVNP010000098.1 tpg gene 12815 13546 . + . ID=gene-L8R42_004069;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=L8R42_004069 DAFVNP010000098.1 Protein Homology CDS 12815 13546 . + 0 ID=cds-HBQ7392102.1;Parent=gene-L8R42_004069;Dbxref=NCBI_GP:HBQ7392102.1;Name=HBQ7392102.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=L8R42_004069;product=fimbrial chaperone BcfG;protein_id=HBQ7392102.1;transl_table=11 DAFVNP010000098.1 tpg gene 13611 14456 . + . ID=gene-L8R42_004070;Name=L8R42_004070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004070 DAFVNP010000098.1 Protein Homology CDS 13611 14456 . + 0 ID=cds-HBQ7392103.1;Parent=gene-L8R42_004070;Dbxref=NCBI_GP:HBQ7392103.1;Name=HBQ7392103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=L8R42_004070;product=DsbA family protein;protein_id=HBQ7392103.1;transl_table=11 DAFVNP010000098.1 tpg gene 14495 14782 . + . ID=gene-L8R42_004071;Name=L8R42_004071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004071 DAFVNP010000098.1 Protein Homology CDS 14495 14782 . + 0 ID=cds-HBQ7392104.1;Parent=gene-L8R42_004071;Dbxref=NCBI_GP:HBQ7392104.1;Name=HBQ7392104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=L8R42_004071;product=hypothetical protein;protein_id=HBQ7392104.1;transl_table=11 DAFVNP010000098.1 tpg gene 14882 15331 . - . ID=gene-L8R42_004072;Name=L8R42_004072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004072 DAFVNP010000098.1 Protein Homology CDS 14882 15331 . - 0 ID=cds-HBQ7392105.1;Parent=gene-L8R42_004072;Dbxref=NCBI_GP:HBQ7392105.1;Name=HBQ7392105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=L8R42_004072;product=transcriptional regulator;protein_id=HBQ7392105.1;transl_table=11 DAFVNP010000098.1 tpg gene 15701 16705 . + . ID=gene-L8R42_004073;Name=L8R42_004073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004073 DAFVNP010000098.1 Protein Homology CDS 15701 16705 . + 0 ID=cds-HBQ7392106.1;Parent=gene-L8R42_004073;Dbxref=NCBI_GP:HBQ7392106.1;Name=HBQ7392106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=L8R42_004073;product=LysR family transcriptional regulator;protein_id=HBQ7392106.1;transl_table=11 ##sequence-region DAFVNP010000099.1 1 16719 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000099.1 tpg region 1 16719 . + . ID=DAFVNP010000099.1:1..16719;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000099.1 tpg gene 1 860 . + . ID=gene-L8R42_004074;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=L8R42_004074;partial=true;start_range=.,1 DAFVNP010000099.1 Protein Homology CDS 1 860 . + 2 ID=cds-HBQ7392107.1;Parent=gene-L8R42_004074;Dbxref=NCBI_GP:HBQ7392107.1;Name=HBQ7392107.1;gbkey=CDS;gene=nanK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=L8R42_004074;partial=true;product=N-acetylmannosamine kinase;protein_id=HBQ7392107.1;start_range=.,1;transl_table=11 DAFVNP010000099.1 tpg gene 857 1324 . + . ID=gene-L8R42_004075;Name=L8R42_004075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004075 DAFVNP010000099.1 Protein Homology CDS 857 1324 . + 0 ID=cds-HBQ7392108.1;Parent=gene-L8R42_004075;Dbxref=NCBI_GP:HBQ7392108.1;Name=HBQ7392108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=L8R42_004075;product=YhcH/YjgK/YiaL family protein;protein_id=HBQ7392108.1;transl_table=11 DAFVNP010000099.1 tpg gene 1406 2686 . - . ID=gene-L8R42_004076;Name=L8R42_004076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004076 DAFVNP010000099.1 Protein Homology CDS 1406 2686 . - 0 ID=cds-HBQ7392109.1;Parent=gene-L8R42_004076;Dbxref=NCBI_GP:HBQ7392109.1;Name=HBQ7392109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=L8R42_004076;product=cytosine deaminase;protein_id=HBQ7392109.1;transl_table=11 DAFVNP010000099.1 tpg gene 2673 3926 . - . ID=gene-L8R42_004077;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=L8R42_004077 DAFVNP010000099.1 Protein Homology CDS 2673 3926 . - 0 ID=cds-HBQ7392110.1;Parent=gene-L8R42_004077;Dbxref=NCBI_GP:HBQ7392110.1;Name=HBQ7392110.1;gbkey=CDS;gene=codB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=L8R42_004077;product=cytosine permease;protein_id=HBQ7392110.1;transl_table=11 DAFVNP010000099.1 tpg gene 4042 5145 . - . ID=gene-L8R42_004078;Name=L8R42_004078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004078 DAFVNP010000099.1 Protein Homology CDS 4042 5145 . - 0 ID=cds-HBQ7392111.1;Parent=gene-L8R42_004078;Dbxref=NCBI_GP:HBQ7392111.1;Name=HBQ7392111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=L8R42_004078;product=DUF1016 family protein;protein_id=HBQ7392111.1;transl_table=11 DAFVNP010000099.1 tpg gene 5353 6771 . - . ID=gene-L8R42_004079;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=L8R42_004079 DAFVNP010000099.1 Protein Homology CDS 5353 6771 . - 0 ID=cds-HBQ7392112.1;Parent=gene-L8R42_004079;Dbxref=NCBI_GP:HBQ7392112.1;Name=HBQ7392112.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=L8R42_004079;product=glutamate synthase subunit GltD;protein_id=HBQ7392112.1;transl_table=11 DAFVNP010000099.1 tpg gene 6781 11241 . - . ID=gene-L8R42_004080;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=L8R42_004080 DAFVNP010000099.1 Protein Homology CDS 6781 11241 . - 0 ID=cds-HBQ7392113.1;Parent=gene-L8R42_004080;Dbxref=NCBI_GP:HBQ7392113.1;Name=HBQ7392113.1;gbkey=CDS;gene=gltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=L8R42_004080;product=glutamate synthase large subunit;protein_id=HBQ7392113.1;transl_table=11 DAFVNP010000099.1 tpg gene 11913 12842 . + . ID=gene-L8R42_004081;Name=L8R42_004081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004081 DAFVNP010000099.1 Protein Homology CDS 11913 12842 . + 0 ID=cds-HBQ7392114.1;Parent=gene-L8R42_004081;Dbxref=NCBI_GP:HBQ7392114.1;Name=HBQ7392114.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=L8R42_004081;product=TIGR01212 family radical SAM protein;protein_id=HBQ7392114.1;transl_table=11 DAFVNP010000099.1 tpg gene 12936 15272 . + . ID=gene-L8R42_004082;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=L8R42_004082 DAFVNP010000099.1 Protein Homology CDS 12936 15272 . + 0 ID=cds-HBQ7392115.1;Parent=gene-L8R42_004082;Dbxref=NCBI_GP:HBQ7392115.1;Name=HBQ7392115.1;gbkey=CDS;gene=arcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=L8R42_004082;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=HBQ7392115.1;transl_table=11 DAFVNP010000099.1 tpg gene 15499 16152 . + . ID=gene-L8R42_004083;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=L8R42_004083 DAFVNP010000099.1 Protein Homology CDS 15499 16152 . + 0 ID=cds-HBQ7392116.1;Parent=gene-L8R42_004083;Dbxref=NCBI_GP:HBQ7392116.1;Name=HBQ7392116.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=L8R42_004083;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=HBQ7392116.1;transl_table=11 DAFVNP010000099.1 tpg gene 16149 16719 . + . ID=gene-L8R42_004084;Name=mtgA;end_range=16719,.;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=L8R42_004084;partial=true DAFVNP010000099.1 Protein Homology CDS 16149 16719 . + 0 ID=cds-HBQ7392117.1;Parent=gene-L8R42_004084;Dbxref=NCBI_GP:HBQ7392117.1;Name=HBQ7392117.1;end_range=16719,.;gbkey=CDS;gene=mtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=L8R42_004084;partial=true;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=HBQ7392117.1;transl_table=11 ##sequence-region DAFVNP010000100.1 1 16058 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000100.1 tpg region 1 16058 . + . ID=DAFVNP010000100.1:1..16058;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000100.1 tpg gene 1 302 . - . ID=gene-L8R42_004085;Name=L8R42_004085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004085;partial=true;start_range=.,1 DAFVNP010000100.1 Protein Homology CDS 1 302 . - 0 ID=cds-HBQ7392118.1;Parent=gene-L8R42_004085;Dbxref=NCBI_GP:HBQ7392118.1;Name=HBQ7392118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=L8R42_004085;partial=true;product=heme exporter protein CcmB;protein_id=HBQ7392118.1;start_range=.,1;transl_table=11 DAFVNP010000100.1 tpg gene 299 916 . - . ID=gene-L8R42_004086;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=L8R42_004086 DAFVNP010000100.1 Protein Homology CDS 299 916 . - 0 ID=cds-HBQ7392119.1;Parent=gene-L8R42_004086;Dbxref=NCBI_GP:HBQ7392119.1;Name=HBQ7392119.1;gbkey=CDS;gene=ccmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=L8R42_004086;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=HBQ7392119.1;transl_table=11 DAFVNP010000100.1 tpg gene 922 2322 . - . ID=gene-L8R42_004087;Name=L8R42_004087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004087 DAFVNP010000100.1 Protein Homology CDS 922 2322 . - 0 ID=cds-HBQ7392120.1;Parent=gene-L8R42_004087;Dbxref=NCBI_GP:HBQ7392120.1;Name=HBQ7392120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=L8R42_004087;product=cytochrome-c peroxidase;protein_id=HBQ7392120.1;transl_table=11 DAFVNP010000100.1 tpg gene 2512 3144 . - . ID=gene-L8R42_004088;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=L8R42_004088 DAFVNP010000100.1 Protein Homology CDS 2512 3144 . - 0 ID=cds-HBQ7392121.1;Parent=gene-L8R42_004088;Dbxref=NCBI_GP:HBQ7392121.1;Name=HBQ7392121.1;gbkey=CDS;gene=torD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=L8R42_004088;product=molecular chaperone TorD;protein_id=HBQ7392121.1;transl_table=11 DAFVNP010000100.1 tpg gene 3137 5689 . - . ID=gene-L8R42_004089;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=L8R42_004089 DAFVNP010000100.1 Protein Homology CDS 3137 5689 . - 0 ID=cds-HBQ7392122.1;Parent=gene-L8R42_004089;Dbxref=NCBI_GP:HBQ7392122.1;Name=HBQ7392122.1;gbkey=CDS;gene=torA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=L8R42_004089;product=trimethylamine-N-oxide reductase TorA;protein_id=HBQ7392122.1;transl_table=11 DAFVNP010000100.1 tpg gene 5679 6863 . - . ID=gene-L8R42_004090;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=L8R42_004090 DAFVNP010000100.1 Protein Homology CDS 5679 6863 . - 0 ID=cds-HBQ7392123.1;Parent=gene-L8R42_004090;Dbxref=NCBI_GP:HBQ7392123.1;Name=HBQ7392123.1;gbkey=CDS;gene=torC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=L8R42_004090;product=pentaheme c-type cytochrome TorC;protein_id=HBQ7392123.1;transl_table=11 DAFVNP010000100.1 tpg gene 6993 7685 . + . ID=gene-L8R42_004091;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=L8R42_004091 DAFVNP010000100.1 Protein Homology CDS 6993 7685 . + 0 ID=cds-HBQ7392124.1;Parent=gene-L8R42_004091;Dbxref=NCBI_GP:HBQ7392124.1;Name=HBQ7392124.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=L8R42_004091;product=two-component system response regulator TorR;protein_id=HBQ7392124.1;transl_table=11 DAFVNP010000100.1 tpg gene 7658 8698 . - . ID=gene-L8R42_004092;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=L8R42_004092 DAFVNP010000100.1 Protein Homology CDS 7658 8698 . - 0 ID=cds-HBQ7392125.1;Parent=gene-L8R42_004092;Dbxref=NCBI_GP:HBQ7392125.1;Name=HBQ7392125.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=L8R42_004092;product=TMAO reductase system periplasmic protein TorT;protein_id=HBQ7392125.1;transl_table=11 DAFVNP010000100.1 tpg gene 8778 11513 . + . ID=gene-L8R42_004093;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=L8R42_004093 DAFVNP010000100.1 Protein Homology CDS 8778 11513 . + 0 ID=cds-HBQ7392126.1;Parent=gene-L8R42_004093;Dbxref=NCBI_GP:HBQ7392126.1;Name=HBQ7392126.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=L8R42_004093;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=HBQ7392126.1;transl_table=11 DAFVNP010000100.1 tpg gene 11618 12745 . - . ID=gene-L8R42_004094;Name=L8R42_004094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004094 DAFVNP010000100.1 Protein Homology CDS 11618 12745 . - 0 ID=cds-HBQ7392127.1;Parent=gene-L8R42_004094;Dbxref=NCBI_GP:HBQ7392127.1;Name=HBQ7392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762570.1;locus_tag=L8R42_004094;product=DUF4056 domain-containing protein;protein_id=HBQ7392127.1;transl_table=11 DAFVNP010000100.1 tpg gene 12742 13881 . - . ID=gene-L8R42_004095;Name=L8R42_004095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004095 DAFVNP010000100.1 Protein Homology CDS 12742 13881 . - 0 ID=cds-HBQ7392128.1;Parent=gene-L8R42_004095;Dbxref=NCBI_GP:HBQ7392128.1;Name=HBQ7392128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528293.1;locus_tag=L8R42_004095;product=BamA/TamA family outer membrane protein;protein_id=HBQ7392128.1;transl_table=11 DAFVNP010000100.1 tpg gene 13878 14900 . - . ID=gene-L8R42_004096;Name=L8R42_004096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004096 DAFVNP010000100.1 Protein Homology CDS 13878 14900 . - 0 ID=cds-HBQ7392129.1;Parent=gene-L8R42_004096;Dbxref=NCBI_GP:HBQ7392129.1;Name=HBQ7392129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528257.1;locus_tag=L8R42_004096;product=hypothetical protein;protein_id=HBQ7392129.1;transl_table=11 DAFVNP010000100.1 tpg gene 15102 15914 . - . ID=gene-L8R42_004097;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=L8R42_004097 DAFVNP010000100.1 Protein Homology CDS 15102 15914 . - 0 ID=cds-HBQ7392130.1;Parent=gene-L8R42_004097;Dbxref=NCBI_GP:HBQ7392130.1;Name=HBQ7392130.1;gbkey=CDS;gene=yidA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=L8R42_004097;product=sugar-phosphatase;protein_id=HBQ7392130.1;transl_table=11 ##sequence-region DAFVNP010000101.1 1 16027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000101.1 tpg region 1 16027 . + . ID=DAFVNP010000101.1:1..16027;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000101.1 tpg gene 76 258 . + . ID=gene-L8R42_004098;Name=L8R42_004098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004098 DAFVNP010000101.1 Protein Homology CDS 76 258 . + 0 ID=cds-HBQ7392131.1;Parent=gene-L8R42_004098;Dbxref=NCBI_GP:HBQ7392131.1;Name=HBQ7392131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=L8R42_004098;product=general stress protein;protein_id=HBQ7392131.1;transl_table=11 DAFVNP010000101.1 tpg gene 348 851 . + . ID=gene-L8R42_004099;Name=L8R42_004099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004099 DAFVNP010000101.1 Protein Homology CDS 348 851 . + 0 ID=cds-HBQ7392132.1;Parent=gene-L8R42_004099;Dbxref=NCBI_GP:HBQ7392132.1;Name=HBQ7392132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=L8R42_004099;product=ferritin-like domain-containing protein;protein_id=HBQ7392132.1;transl_table=11 DAFVNP010000101.1 tpg gene 925 1431 . + . ID=gene-L8R42_004100;Name=L8R42_004100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004100 DAFVNP010000101.1 Protein Homology CDS 925 1431 . + 0 ID=cds-HBQ7392133.1;Parent=gene-L8R42_004100;Dbxref=NCBI_GP:HBQ7392133.1;Name=HBQ7392133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=L8R42_004100;product=ferritin-like domain-containing protein;protein_id=HBQ7392133.1;transl_table=11 DAFVNP010000101.1 tpg gene 1451 2329 . + . ID=gene-L8R42_004101;Name=L8R42_004101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004101 DAFVNP010000101.1 Protein Homology CDS 1451 2329 . + 0 ID=cds-HBQ7392134.1;Parent=gene-L8R42_004101;Dbxref=NCBI_GP:HBQ7392134.1;Name=HBQ7392134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=L8R42_004101;product=manganese catalase family protein;protein_id=HBQ7392134.1;transl_table=11 DAFVNP010000101.1 tpg gene 2411 3049 . - . ID=gene-L8R42_004102;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=L8R42_004102 DAFVNP010000101.1 Protein Homology CDS 2411 3049 . - 0 ID=cds-HBQ7392135.1;Parent=gene-L8R42_004102;Dbxref=NCBI_GP:HBQ7392135.1;Name=HBQ7392135.1;gbkey=CDS;gene=ompW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=L8R42_004102;product=outer membrane protein OmpW;protein_id=HBQ7392135.1;transl_table=11 DAFVNP010000101.1 tpg gene 3385 3789 . + . ID=gene-L8R42_004103;Name=L8R42_004103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004103 DAFVNP010000101.1 Protein Homology CDS 3385 3789 . + 0 ID=cds-HBQ7392136.1;Parent=gene-L8R42_004103;Dbxref=NCBI_GP:HBQ7392136.1;Name=HBQ7392136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=L8R42_004103;product=YkgJ family cysteine cluster protein;protein_id=HBQ7392136.1;transl_table=11 DAFVNP010000101.1 tpg gene 3815 4558 . + . ID=gene-L8R42_004104;Name=L8R42_004104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004104 DAFVNP010000101.1 Protein Homology CDS 3815 4558 . + 0 ID=cds-HBQ7392137.1;Parent=gene-L8R42_004104;Dbxref=NCBI_GP:HBQ7392137.1;Name=HBQ7392137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=L8R42_004104;product=UPF0259 family protein;protein_id=HBQ7392137.1;transl_table=11 DAFVNP010000101.1 tpg gene 4615 5154 . + . ID=gene-L8R42_004105;Name=L8R42_004105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004105 DAFVNP010000101.1 Protein Homology CDS 4615 5154 . + 0 ID=cds-HBQ7392138.1;Parent=gene-L8R42_004105;Dbxref=NCBI_GP:HBQ7392138.1;Name=HBQ7392138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=L8R42_004105;product=septation protein A;protein_id=HBQ7392138.1;transl_table=11 DAFVNP010000101.1 tpg gene 5315 5716 . + . ID=gene-L8R42_004106;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=L8R42_004106 DAFVNP010000101.1 Protein Homology CDS 5315 5716 . + 0 ID=cds-HBQ7392139.1;Parent=gene-L8R42_004106;Dbxref=NCBI_GP:HBQ7392139.1;Name=HBQ7392139.1;gbkey=CDS;gene=yciA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=L8R42_004106;product=acyl-CoA thioester hydrolase YciA;protein_id=HBQ7392139.1;transl_table=11 DAFVNP010000101.1 tpg gene 5776 6498 . - . ID=gene-L8R42_004107;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=L8R42_004107 DAFVNP010000101.1 Protein Homology CDS 5776 6498 . - 0 ID=cds-HBQ7392140.1;Parent=gene-L8R42_004107;Dbxref=NCBI_GP:HBQ7392140.1;Name=HBQ7392140.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=L8R42_004107;product=TonB system transport protein TonB;protein_id=HBQ7392140.1;transl_table=11 DAFVNP010000101.1 tpg gene 6722 7018 . + . ID=gene-L8R42_004108;Name=L8R42_004108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004108 DAFVNP010000101.1 Protein Homology CDS 6722 7018 . + 0 ID=cds-HBQ7392141.1;Parent=gene-L8R42_004108;Dbxref=NCBI_GP:HBQ7392141.1;Name=HBQ7392141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=L8R42_004108;product=YciI family protein;protein_id=HBQ7392141.1;transl_table=11 DAFVNP010000101.1 tpg gene 7062 7235 . - . ID=gene-L8R42_004109;Name=L8R42_004109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004109 DAFVNP010000101.1 Protein Homology CDS 7062 7235 . - 0 ID=cds-HBQ7392142.1;Parent=gene-L8R42_004109;Dbxref=NCBI_GP:HBQ7392142.1;Name=HBQ7392142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=L8R42_004109;product=YciY family protein;protein_id=HBQ7392142.1;transl_table=11 DAFVNP010000101.1 tpg gene 7378 8838 . + . ID=gene-L8R42_004110;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=L8R42_004110 DAFVNP010000101.1 Protein Homology CDS 7378 8838 . + 0 ID=cds-HBQ7392143.1;Parent=gene-L8R42_004110;Dbxref=NCBI_GP:HBQ7392143.1;Name=HBQ7392143.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=L8R42_004110;product=cardiolipin synthase;protein_id=HBQ7392143.1;transl_table=11 DAFVNP010000101.1 tpg gene 8872 9201 . + . ID=gene-L8R42_004111;Name=L8R42_004111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004111 DAFVNP010000101.1 Protein Homology CDS 8872 9201 . + 0 ID=cds-HBQ7392144.1;Parent=gene-L8R42_004111;Dbxref=NCBI_GP:HBQ7392144.1;Name=HBQ7392144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=L8R42_004111;product=YciU family protein;protein_id=HBQ7392144.1;transl_table=11 DAFVNP010000101.1 tpg gene 9249 10085 . - . ID=gene-L8R42_004112;Name=L8R42_004112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004112 DAFVNP010000101.1 Protein Homology CDS 9249 10085 . - 0 ID=cds-HBQ7392145.1;Parent=gene-L8R42_004112;Dbxref=NCBI_GP:HBQ7392145.1;Name=HBQ7392145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=L8R42_004112;product=ion transporter;protein_id=HBQ7392145.1;transl_table=11 DAFVNP010000101.1 tpg gene 10133 11137 . - . ID=gene-L8R42_004113;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=L8R42_004113 DAFVNP010000101.1 Protein Homology CDS 10133 11137 . - 0 ID=cds-HBQ7392146.1;Parent=gene-L8R42_004113;Dbxref=NCBI_GP:HBQ7392146.1;Name=HBQ7392146.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=L8R42_004113;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=HBQ7392146.1;transl_table=11 DAFVNP010000101.1 tpg gene 11134 12141 . - . ID=gene-L8R42_004114;Name=L8R42_004114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004114 DAFVNP010000101.1 Protein Homology CDS 11134 12141 . - 0 ID=cds-HBQ7392147.1;Parent=gene-L8R42_004114;Dbxref=NCBI_GP:HBQ7392147.1;Name=HBQ7392147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=L8R42_004114;product=ABC transporter ATP-binding protein;protein_id=HBQ7392147.1;transl_table=11 DAFVNP010000101.1 tpg gene 12153 13061 . - . ID=gene-L8R42_004115;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=L8R42_004115 DAFVNP010000101.1 Protein Homology CDS 12153 13061 . - 0 ID=cds-HBQ7392148.1;Parent=gene-L8R42_004115;Dbxref=NCBI_GP:HBQ7392148.1;Name=HBQ7392148.1;gbkey=CDS;gene=oppC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=L8R42_004115;product=oligopeptide ABC transporter permease OppC;protein_id=HBQ7392148.1;transl_table=11 DAFVNP010000101.1 tpg gene 13076 13996 . - . ID=gene-L8R42_004116;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=L8R42_004116 DAFVNP010000101.1 Protein Homology CDS 13076 13996 . - 0 ID=cds-HBQ7392149.1;Parent=gene-L8R42_004116;Dbxref=NCBI_GP:HBQ7392149.1;Name=HBQ7392149.1;gbkey=CDS;gene=oppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=L8R42_004116;product=oligopeptide ABC transporter permease OppB;protein_id=HBQ7392149.1;transl_table=11 DAFVNP010000101.1 tpg gene 14119 15750 . - . ID=gene-L8R42_004117;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=L8R42_004117 DAFVNP010000101.1 Protein Homology CDS 14119 15750 . - 0 ID=cds-HBQ7392150.1;Parent=gene-L8R42_004117;Dbxref=NCBI_GP:HBQ7392150.1;Name=HBQ7392150.1;gbkey=CDS;gene=oppA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=L8R42_004117;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=HBQ7392150.1;transl_table=11 ##sequence-region DAFVNP010000102.1 1 15959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000102.1 tpg region 1 15959 . + . ID=DAFVNP010000102.1:1..15959;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000102.1 tpg gene 6 989 . + . ID=gene-L8R42_004118;Name=L8R42_004118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004118 DAFVNP010000102.1 Protein Homology CDS 6 989 . + 0 ID=cds-HBQ7392151.1;Parent=gene-L8R42_004118;Dbxref=NCBI_GP:HBQ7392151.1;Name=HBQ7392151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=L8R42_004118;product=TRAP transporter substrate-binding protein;protein_id=HBQ7392151.1;transl_table=11 DAFVNP010000102.1 tpg gene 1008 1523 . + . ID=gene-L8R42_004119;Name=L8R42_004119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004119 DAFVNP010000102.1 Protein Homology CDS 1008 1523 . + 0 ID=cds-HBQ7392152.1;Parent=gene-L8R42_004119;Dbxref=NCBI_GP:HBQ7392152.1;Name=HBQ7392152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=L8R42_004119;product=TRAP transporter small permease;protein_id=HBQ7392152.1;transl_table=11 DAFVNP010000102.1 tpg gene 1516 2823 . + . ID=gene-L8R42_004120;Name=L8R42_004120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004120 DAFVNP010000102.1 Protein Homology CDS 1516 2823 . + 0 ID=cds-HBQ7392153.1;Parent=gene-L8R42_004120;Dbxref=NCBI_GP:HBQ7392153.1;Name=HBQ7392153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=L8R42_004120;product=TRAP transporter large permease;protein_id=HBQ7392153.1;transl_table=11 DAFVNP010000102.1 tpg gene 2981 3664 . - . ID=gene-L8R42_004121;Name=L8R42_004121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004121 DAFVNP010000102.1 Protein Homology CDS 2981 3664 . - 0 ID=cds-HBQ7392154.1;Parent=gene-L8R42_004121;Dbxref=NCBI_GP:HBQ7392154.1;Name=HBQ7392154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=L8R42_004121;product=oligogalacturonate-specific porin KdgM family protein;protein_id=HBQ7392154.1;transl_table=11 DAFVNP010000102.1 tpg gene 4283 5317 . + . ID=gene-L8R42_004122;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=L8R42_004122 DAFVNP010000102.1 Protein Homology CDS 4283 5317 . + 0 ID=cds-HBQ7392155.1;Parent=gene-L8R42_004122;Dbxref=NCBI_GP:HBQ7392155.1;Name=HBQ7392155.1;gbkey=CDS;gene=rhaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=L8R42_004122;product=L-rhamnose/proton symporter RhaT;protein_id=HBQ7392155.1;transl_table=11 DAFVNP010000102.1 tpg gene 5314 6162 . - . ID=gene-L8R42_004123;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=L8R42_004123 DAFVNP010000102.1 Protein Homology CDS 5314 6162 . - 0 ID=cds-HBQ7392156.1;Parent=gene-L8R42_004123;Dbxref=NCBI_GP:HBQ7392156.1;Name=HBQ7392156.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=L8R42_004123;product=HTH-type transcriptional activator RhaR;protein_id=HBQ7392156.1;transl_table=11 DAFVNP010000102.1 tpg gene 6315 7151 . - . ID=gene-L8R42_004124;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=L8R42_004124 DAFVNP010000102.1 Protein Homology CDS 6315 7151 . - 0 ID=cds-HBQ7392157.1;Parent=gene-L8R42_004124;Dbxref=NCBI_GP:HBQ7392157.1;Name=HBQ7392157.1;gbkey=CDS;gene=rhaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=L8R42_004124;product=HTH-type transcriptional activator RhaS;protein_id=HBQ7392157.1;transl_table=11 DAFVNP010000102.1 tpg gene 7439 8908 . + . ID=gene-L8R42_004125;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=L8R42_004125 DAFVNP010000102.1 Protein Homology CDS 7439 8908 . + 0 ID=cds-HBQ7392158.1;Parent=gene-L8R42_004125;Dbxref=NCBI_GP:HBQ7392158.1;Name=HBQ7392158.1;gbkey=CDS;gene=rhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=L8R42_004125;product=rhamnulokinase;protein_id=HBQ7392158.1;transl_table=11 DAFVNP010000102.1 tpg gene 8905 10164 . + . ID=gene-L8R42_004126;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=L8R42_004126 DAFVNP010000102.1 Protein Homology CDS 8905 10164 . + 0 ID=cds-HBQ7392159.1;Parent=gene-L8R42_004126;Dbxref=NCBI_GP:HBQ7392159.1;Name=HBQ7392159.1;gbkey=CDS;gene=rhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=L8R42_004126;product=L-rhamnose isomerase;protein_id=HBQ7392159.1;transl_table=11 DAFVNP010000102.1 tpg gene 10307 11134 . + . ID=gene-L8R42_004127;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=L8R42_004127 DAFVNP010000102.1 Protein Homology CDS 10307 11134 . + 0 ID=cds-HBQ7392160.1;Parent=gene-L8R42_004127;Dbxref=NCBI_GP:HBQ7392160.1;Name=HBQ7392160.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=L8R42_004127;product=rhamnulose-1-phosphate aldolase;protein_id=HBQ7392160.1;transl_table=11 DAFVNP010000102.1 tpg gene 11261 12409 . + . ID=gene-L8R42_004128;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=L8R42_004128 DAFVNP010000102.1 Protein Homology CDS 11261 12409 . + 0 ID=cds-HBQ7392161.1;Parent=gene-L8R42_004128;Dbxref=NCBI_GP:HBQ7392161.1;Name=HBQ7392161.1;gbkey=CDS;gene=fucO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=L8R42_004128;product=lactaldehyde reductase;protein_id=HBQ7392161.1;transl_table=11 DAFVNP010000102.1 tpg gene 12406 12720 . + . ID=gene-L8R42_004129;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=L8R42_004129 DAFVNP010000102.1 Protein Homology CDS 12406 12720 . + 0 ID=cds-HBQ7392162.1;Parent=gene-L8R42_004129;Dbxref=NCBI_GP:HBQ7392162.1;Name=HBQ7392162.1;gbkey=CDS;gene=rhaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=L8R42_004129;product=L-rhamnose mutarotase;protein_id=HBQ7392162.1;transl_table=11 DAFVNP010000102.1 tpg gene 12809 13357 . - . ID=gene-L8R42_004130;Name=L8R42_004130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004130 DAFVNP010000102.1 Protein Homology CDS 12809 13357 . - 0 ID=cds-HBQ7392163.1;Parent=gene-L8R42_004130;Dbxref=NCBI_GP:HBQ7392163.1;Name=HBQ7392163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=L8R42_004130;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7392163.1;transl_table=11 DAFVNP010000102.1 tpg gene 13458 14117 . + . ID=gene-L8R42_004131;Name=L8R42_004131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004131 DAFVNP010000102.1 Protein Homology CDS 13458 14117 . + 0 ID=cds-HBQ7392164.1;Parent=gene-L8R42_004131;Dbxref=NCBI_GP:HBQ7392164.1;Name=HBQ7392164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=L8R42_004131;product=AzlC family ABC transporter permease;protein_id=HBQ7392164.1;transl_table=11 DAFVNP010000102.1 tpg gene 14117 14440 . + . ID=gene-L8R42_004132;Name=L8R42_004132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004132 DAFVNP010000102.1 Protein Homology CDS 14117 14440 . + 0 ID=cds-HBQ7392165.1;Parent=gene-L8R42_004132;Dbxref=NCBI_GP:HBQ7392165.1;Name=HBQ7392165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=L8R42_004132;product=AzlD domain-containing protein;protein_id=HBQ7392165.1;transl_table=11 DAFVNP010000102.1 tpg gene 14795 15895 . - . ID=gene-L8R42_004133;Name=L8R42_004133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004133 DAFVNP010000102.1 Protein Homology CDS 14795 15895 . - 0 ID=cds-HBQ7392166.1;Parent=gene-L8R42_004133;Dbxref=NCBI_GP:HBQ7392166.1;Name=HBQ7392166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462920.2;locus_tag=L8R42_004133;product=DUF3829 domain-containing protein;protein_id=HBQ7392166.1;transl_table=11 ##sequence-region DAFVNP010000103.1 1 15474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000103.1 tpg region 1 15474 . + . ID=DAFVNP010000103.1:1..15474;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000103.1 tpg gene 1 1083 . - . ID=gene-L8R42_004134;Name=L8R42_004134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004134;partial=true;start_range=.,1 DAFVNP010000103.1 Protein Homology CDS 1 1083 . - 0 ID=cds-HBQ7392167.1;Parent=gene-L8R42_004134;Dbxref=NCBI_GP:HBQ7392167.1;Name=HBQ7392167.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=L8R42_004134;partial=true;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=HBQ7392167.1;start_range=.,1;transl_table=11 DAFVNP010000103.1 tpg gene 1197 2165 . - . ID=gene-L8R42_004135;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=L8R42_004135 DAFVNP010000103.1 Protein Homology CDS 1197 2165 . - 0 ID=cds-HBQ7392168.1;Parent=gene-L8R42_004135;Dbxref=NCBI_GP:HBQ7392168.1;Name=HBQ7392168.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=L8R42_004135;product=thioredoxin-disulfide reductase;protein_id=HBQ7392168.1;transl_table=11 DAFVNP010000103.1 tpg gene 2712 3206 . + . ID=gene-L8R42_004136;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=L8R42_004136 DAFVNP010000103.1 Protein Homology CDS 2712 3206 . + 0 ID=cds-HBQ7392169.1;Parent=gene-L8R42_004136;Dbxref=NCBI_GP:HBQ7392169.1;Name=HBQ7392169.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=L8R42_004136;product=leucine-responsive transcriptional regulator Lrp;protein_id=HBQ7392169.1;transl_table=11 DAFVNP010000103.1 tpg gene 3341 7336 . + . ID=gene-L8R42_004137;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=L8R42_004137 DAFVNP010000103.1 Protein Homology CDS 3341 7336 . + 0 ID=cds-HBQ7392170.1;Parent=gene-L8R42_004137;Dbxref=NCBI_GP:HBQ7392170.1;Name=HBQ7392170.1;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=L8R42_004137;product=DNA translocase FtsK;protein_id=HBQ7392170.1;transl_table=11 DAFVNP010000103.1 tpg gene 7479 8090 . + . ID=gene-L8R42_004138;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=L8R42_004138 DAFVNP010000103.1 Protein Homology CDS 7479 8090 . + 0 ID=cds-HBQ7392171.1;Parent=gene-L8R42_004138;Dbxref=NCBI_GP:HBQ7392171.1;Name=HBQ7392171.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=L8R42_004138;product=outer membrane lipoprotein chaperone LolA;protein_id=HBQ7392171.1;transl_table=11 DAFVNP010000103.1 tpg gene 8100 9443 . + . ID=gene-L8R42_004139;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=L8R42_004139 DAFVNP010000103.1 Protein Homology CDS 8100 9443 . + 0 ID=cds-HBQ7392172.1;Parent=gene-L8R42_004139;Dbxref=NCBI_GP:HBQ7392172.1;Name=HBQ7392172.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=L8R42_004139;product=replication-associated recombination protein RarA;protein_id=HBQ7392172.1;transl_table=11 DAFVNP010000103.1 tpg gene 9702 10994 . + . ID=gene-L8R42_004140;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=L8R42_004140 DAFVNP010000103.1 Protein Homology CDS 9702 10994 . + 0 ID=cds-HBQ7392173.1;Parent=gene-L8R42_004140;Dbxref=NCBI_GP:HBQ7392173.1;Name=HBQ7392173.1;gbkey=CDS;gene=serS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=L8R42_004140;product=serine--tRNA ligase;protein_id=HBQ7392173.1;transl_table=11 DAFVNP010000103.1 tpg gene 11231 13675 . + . ID=gene-L8R42_004141;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=L8R42_004141 DAFVNP010000103.1 Protein Homology CDS 11231 13675 . + 0 ID=cds-HBQ7392174.1;Parent=gene-L8R42_004141;Dbxref=NCBI_GP:HBQ7392174.1;Name=HBQ7392174.1;gbkey=CDS;gene=dmsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=L8R42_004141;product=dimethylsulfoxide reductase subunit A;protein_id=HBQ7392174.1;transl_table=11 DAFVNP010000103.1 tpg gene 13686 14303 . + . ID=gene-L8R42_004142;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=L8R42_004142 DAFVNP010000103.1 Protein Homology CDS 13686 14303 . + 0 ID=cds-HBQ7392175.1;Parent=gene-L8R42_004142;Dbxref=NCBI_GP:HBQ7392175.1;Name=HBQ7392175.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=L8R42_004142;product=dimethylsulfoxide reductase subunit B;protein_id=HBQ7392175.1;transl_table=11 DAFVNP010000103.1 tpg gene 14305 15168 . + . ID=gene-L8R42_004143;Name=L8R42_004143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004143 DAFVNP010000103.1 Protein Homology CDS 14305 15168 . + 0 ID=cds-HBQ7392176.1;Parent=gene-L8R42_004143;Dbxref=NCBI_GP:HBQ7392176.1;Name=HBQ7392176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=L8R42_004143;product=dimethyl sulfoxide reductase anchor subunit;protein_id=HBQ7392176.1;transl_table=11 ##sequence-region DAFVNP010000104.1 1 15051 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000104.1 tpg region 1 15051 . + . ID=DAFVNP010000104.1:1..15051;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000104.1 tpg gene 248 1054 . - . ID=gene-L8R42_004144;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=L8R42_004144 DAFVNP010000104.1 Protein Homology CDS 248 1054 . - 0 ID=cds-HBQ7392177.1;Parent=gene-L8R42_004144;Dbxref=NCBI_GP:HBQ7392177.1;Name=HBQ7392177.1;gbkey=CDS;gene=trpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=L8R42_004144;product=tryptophan synthase subunit alpha;protein_id=HBQ7392177.1;transl_table=11 DAFVNP010000104.1 tpg gene 1054 2247 . - . ID=gene-L8R42_004145;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=L8R42_004145 DAFVNP010000104.1 Protein Homology CDS 1054 2247 . - 0 ID=cds-HBQ7392178.1;Parent=gene-L8R42_004145;Dbxref=NCBI_GP:HBQ7392178.1;Name=HBQ7392178.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=L8R42_004145;product=tryptophan synthase subunit beta;protein_id=HBQ7392178.1;transl_table=11 DAFVNP010000104.1 tpg gene 2257 3615 . - . ID=gene-L8R42_004146;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=L8R42_004146 DAFVNP010000104.1 Protein Homology CDS 2257 3615 . - 0 ID=cds-HBQ7392179.1;Parent=gene-L8R42_004146;Dbxref=NCBI_GP:HBQ7392179.1;Name=HBQ7392179.1;gbkey=CDS;gene=trpCF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=L8R42_004146;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=HBQ7392179.1;transl_table=11 DAFVNP010000104.1 tpg gene 3619 5214 . - . ID=gene-L8R42_004147;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=L8R42_004147 DAFVNP010000104.1 Protein Homology CDS 3619 5214 . - 0 ID=cds-HBQ7392180.1;Parent=gene-L8R42_004147;Dbxref=NCBI_GP:HBQ7392180.1;Name=HBQ7392180.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=L8R42_004147;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=HBQ7392180.1;transl_table=11 DAFVNP010000104.1 tpg gene 5214 6776 . - . ID=gene-L8R42_004148;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=L8R42_004148 DAFVNP010000104.1 Protein Homology CDS 5214 6776 . - 0 ID=cds-HBQ7392181.1;Parent=gene-L8R42_004148;Dbxref=NCBI_GP:HBQ7392181.1;Name=HBQ7392181.1;gbkey=CDS;gene=trpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=L8R42_004148;product=anthranilate synthase component I;protein_id=HBQ7392181.1;transl_table=11 DAFVNP010000104.1 cmsearch sequence_feature 6799 6894 . - . ID=id-DAFVNP010000104.1:6799..6894;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 DAFVNP010000104.1 tpg gene 6871 6915 . - . ID=gene-L8R42_004149;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=L8R42_004149 DAFVNP010000104.1 Protein Homology CDS 6871 6915 . - 0 ID=cds-HBQ7392182.1;Parent=gene-L8R42_004149;Dbxref=NCBI_GP:HBQ7392182.1;Name=HBQ7392182.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=L8R42_004149;product=trp operon leader peptide;protein_id=HBQ7392182.1;transl_table=11 DAFVNP010000104.1 tpg gene 7037 7918 . + . ID=gene-L8R42_004150;Name=yciV;gbkey=Gene;gene=yciV;gene_biotype=protein_coding;locus_tag=L8R42_004150 DAFVNP010000104.1 Protein Homology CDS 7037 7918 . + 0 ID=cds-HBQ7392183.1;Parent=gene-L8R42_004150;Dbxref=NCBI_GP:HBQ7392183.1;Name=HBQ7392183.1;gbkey=CDS;gene=yciV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=L8R42_004150;product=5'-3' exoribonuclease;protein_id=HBQ7392183.1;transl_table=11 DAFVNP010000104.1 tpg gene 7926 8546 . + . ID=gene-L8R42_004151;Name=L8R42_004151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004151 DAFVNP010000104.1 Protein Homology CDS 7926 8546 . + 0 ID=cds-HBQ7392184.1;Parent=gene-L8R42_004151;Dbxref=NCBI_GP:HBQ7392184.1;Name=HBQ7392184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=L8R42_004151;product=threonylcarbamoyl-AMP synthase;protein_id=HBQ7392184.1;transl_table=11 DAFVNP010000104.1 tpg gene 8647 9522 . + . ID=gene-L8R42_004152;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=L8R42_004152 DAFVNP010000104.1 Protein Homology CDS 8647 9522 . + 0 ID=cds-HBQ7392185.1;Parent=gene-L8R42_004152;Dbxref=NCBI_GP:HBQ7392185.1;Name=HBQ7392185.1;gbkey=CDS;gene=rluB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=L8R42_004152;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=HBQ7392185.1;transl_table=11 DAFVNP010000104.1 tpg gene 9609 10199 . - . ID=gene-L8R42_004153;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=L8R42_004153 DAFVNP010000104.1 Protein Homology CDS 9609 10199 . - 0 ID=cds-HBQ7392186.1;Parent=gene-L8R42_004153;Dbxref=NCBI_GP:HBQ7392186.1;Name=HBQ7392186.1;gbkey=CDS;gene=cobO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=L8R42_004153;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=HBQ7392186.1;transl_table=11 DAFVNP010000104.1 tpg gene 10196 10957 . - . ID=gene-L8R42_004154;Name=L8R42_004154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004154 DAFVNP010000104.1 Protein Homology CDS 10196 10957 . - 0 ID=cds-HBQ7392187.1;Parent=gene-L8R42_004154;Dbxref=NCBI_GP:HBQ7392187.1;Name=HBQ7392187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=L8R42_004154;product=YciK family oxidoreductase;protein_id=HBQ7392187.1;transl_table=11 DAFVNP010000104.1 tpg gene 11195 12241 . + . ID=gene-L8R42_004155;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=L8R42_004155 DAFVNP010000104.1 Protein Homology CDS 11195 12241 . + 0 ID=cds-HBQ7392188.1;Parent=gene-L8R42_004155;Dbxref=NCBI_GP:HBQ7392188.1;Name=HBQ7392188.1;gbkey=CDS;gene=sohB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=L8R42_004155;product=protease SohB;protein_id=HBQ7392188.1;transl_table=11 DAFVNP010000104.1 tpg gene 12283 12534 . - . ID=gene-L8R42_004156;Name=L8R42_004156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004156 DAFVNP010000104.1 Protein Homology CDS 12283 12534 . - 0 ID=cds-HBQ7392189.1;Parent=gene-L8R42_004156;Dbxref=NCBI_GP:HBQ7392189.1;Name=HBQ7392189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=L8R42_004156;product=YciN family protein;protein_id=HBQ7392189.1;transl_table=11 DAFVNP010000104.1 tpg gene 12937 15051 . + . ID=gene-L8R42_004157;Name=topA;end_range=15051,.;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=L8R42_004157;partial=true DAFVNP010000104.1 Protein Homology CDS 12937 15051 . + 0 ID=cds-HBQ7392190.1;Parent=gene-L8R42_004157;Dbxref=NCBI_GP:HBQ7392190.1;Name=HBQ7392190.1;end_range=15051,.;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=L8R42_004157;partial=true;product=type I DNA topoisomerase;protein_id=HBQ7392190.1;transl_table=11 ##sequence-region DAFVNP010000105.1 1 14845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000105.1 tpg region 1 14845 . + . ID=DAFVNP010000105.1:1..14845;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000105.1 tpg gene 68 886 . - . ID=gene-L8R42_004158;Name=L8R42_004158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004158 DAFVNP010000105.1 Protein Homology CDS 68 886 . - 0 ID=cds-HBQ7392191.1;Parent=gene-L8R42_004158;Dbxref=NCBI_GP:HBQ7392191.1;Name=HBQ7392191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=L8R42_004158;product=hypothetical protein;protein_id=HBQ7392191.1;transl_table=11 DAFVNP010000105.1 tpg gene 1904 1993 . - . ID=gene-L8R42_004159;Name=L8R42_004159;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004159 DAFVNP010000105.1 tRNAscan-SE tRNA 1904 1993 . - . ID=rna-L8R42_004159;Parent=gene-L8R42_004159;anticodon=(pos:complement(1957..1959));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004159;product=tRNA-Ser DAFVNP010000105.1 tRNAscan-SE exon 1904 1993 . - . ID=exon-L8R42_004159-1;Parent=rna-L8R42_004159;anticodon=(pos:complement(1957..1959));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004159;product=tRNA-Ser DAFVNP010000105.1 tpg gene 2082 2879 . + . ID=gene-L8R42_004160;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=L8R42_004160 DAFVNP010000105.1 Protein Homology CDS 2082 2879 . + 0 ID=cds-HBQ7392192.1;Parent=gene-L8R42_004160;Dbxref=NCBI_GP:HBQ7392192.1;Name=HBQ7392192.1;gbkey=CDS;gene=mtfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=L8R42_004160;product=DgsA anti-repressor MtfA;protein_id=HBQ7392192.1;transl_table=11 DAFVNP010000105.1 tpg gene 2980 3055 . + . ID=gene-L8R42_004161;Name=L8R42_004161;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004161 DAFVNP010000105.1 tRNAscan-SE tRNA 2980 3055 . + . ID=rna-L8R42_004161;Parent=gene-L8R42_004161;anticodon=(pos:3013..3015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004161;product=tRNA-Asn DAFVNP010000105.1 tRNAscan-SE exon 2980 3055 . + . ID=exon-L8R42_004161-1;Parent=rna-L8R42_004161;anticodon=(pos:3013..3015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004161;product=tRNA-Asn DAFVNP010000105.1 tpg pseudogene 3223 3531 . + . ID=gene-L8R42_004162;Name=L8R42_004162;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004162;pseudo=true DAFVNP010000105.1 Protein Homology CDS 3223 3531 . + 0 ID=cds-L8R42_004162;Parent=gene-L8R42_004162;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000960509.1;locus_tag=L8R42_004162;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000105.1 tpg gene 3950 4025 . + . ID=gene-L8R42_004163;Name=L8R42_004163;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004163 DAFVNP010000105.1 tRNAscan-SE tRNA 3950 4025 . + . ID=rna-L8R42_004163;Parent=gene-L8R42_004163;anticodon=(pos:3983..3985);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004163;product=tRNA-Asn DAFVNP010000105.1 tRNAscan-SE exon 3950 4025 . + . ID=exon-L8R42_004163-1;Parent=rna-L8R42_004163;anticodon=(pos:3983..3985);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004163;product=tRNA-Asn DAFVNP010000105.1 tpg gene 4192 4716 . + . ID=gene-L8R42_004164;Name=L8R42_004164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004164 DAFVNP010000105.1 Protein Homology CDS 4192 4716 . + 0 ID=cds-HBQ7392193.1;Parent=gene-L8R42_004164;Dbxref=NCBI_GP:HBQ7392193.1;Name=HBQ7392193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=L8R42_004164;product=peptidase;protein_id=HBQ7392193.1;transl_table=11 DAFVNP010000105.1 tpg gene 5191 6063 . + . ID=gene-L8R42_004165;Name=L8R42_004165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004165 DAFVNP010000105.1 Protein Homology CDS 5191 6063 . + 0 ID=cds-HBQ7392194.1;Parent=gene-L8R42_004165;Dbxref=NCBI_GP:HBQ7392194.1;Name=HBQ7392194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=L8R42_004165;product=integrase domain-containing protein;protein_id=HBQ7392194.1;transl_table=11 DAFVNP010000105.1 tpg pseudogene 6087 6365 . + . ID=gene-L8R42_004166;Name=L8R42_004166;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004166;pseudo=true DAFVNP010000105.1 Protein Homology CDS 6087 6365 . + 0 ID=cds-L8R42_004166;Parent=gene-L8R42_004166;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=L8R42_004166;product=transposase;pseudo=true;transl_table=11 DAFVNP010000105.1 tpg gene 7049 8743 . + . ID=gene-L8R42_004167;Name=L8R42_004167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004167 DAFVNP010000105.1 Protein Homology CDS 7049 8743 . + 0 ID=cds-HBQ7392195.1;Parent=gene-L8R42_004167;Dbxref=NCBI_GP:HBQ7392195.1;Name=HBQ7392195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=L8R42_004167;product=SEL1-like repeat protein;protein_id=HBQ7392195.1;transl_table=11 DAFVNP010000105.1 tpg gene 8800 10530 . + . ID=gene-L8R42_004168;Name=L8R42_004168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004168 DAFVNP010000105.1 Protein Homology CDS 8800 10530 . + 0 ID=cds-HBQ7392196.1;Parent=gene-L8R42_004168;Dbxref=NCBI_GP:HBQ7392196.1;Name=HBQ7392196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=L8R42_004168;product=hypothetical protein;protein_id=HBQ7392196.1;transl_table=11 DAFVNP010000105.1 tpg pseudogene 10588 10692 . - . ID=gene-L8R42_004169;Name=L8R42_004169;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004169;pseudo=true DAFVNP010000105.1 Protein Homology CDS 10588 10692 . - 0 ID=cds-L8R42_004169;Parent=gene-L8R42_004169;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=L8R42_004169;product=DUF520 family protein;pseudo=true;transl_table=11 DAFVNP010000105.1 tpg gene 10740 10913 . + . ID=gene-L8R42_004170;Name=L8R42_004170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004170 DAFVNP010000105.1 Protein Homology CDS 10740 10913 . + 0 ID=cds-HBQ7392197.1;Parent=gene-L8R42_004170;Dbxref=NCBI_GP:HBQ7392197.1;Name=HBQ7392197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=L8R42_004170;product=hypothetical protein;protein_id=HBQ7392197.1;transl_table=11 DAFVNP010000105.1 tpg gene 11420 12874 . - . ID=gene-L8R42_004171;Name=L8R42_004171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004171 DAFVNP010000105.1 Protein Homology CDS 11420 12874 . - 0 ID=cds-HBQ7392198.1;Parent=gene-L8R42_004171;Dbxref=NCBI_GP:HBQ7392198.1;Name=HBQ7392198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=L8R42_004171;product=AMP nucleosidase;protein_id=HBQ7392198.1;transl_table=11 DAFVNP010000105.1 tpg gene 12920 13081 . + . ID=gene-L8R42_004172;Name=L8R42_004172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004172 DAFVNP010000105.1 Protein Homology CDS 12920 13081 . + 0 ID=cds-HBQ7392199.1;Parent=gene-L8R42_004172;Dbxref=NCBI_GP:HBQ7392199.1;Name=HBQ7392199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=L8R42_004172;product=cytoplasmic protein;protein_id=HBQ7392199.1;transl_table=11 DAFVNP010000105.1 tpg gene 13070 13396 . - . ID=gene-L8R42_004173;Name=L8R42_004173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004173 DAFVNP010000105.1 Protein Homology CDS 13070 13396 . - 0 ID=cds-HBQ7392200.1;Parent=gene-L8R42_004173;Dbxref=NCBI_GP:HBQ7392200.1;Name=HBQ7392200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=L8R42_004173;product=DUF1493 family protein;protein_id=HBQ7392200.1;transl_table=11 DAFVNP010000105.1 tpg gene 13390 13854 . - . ID=gene-L8R42_004174;Name=L8R42_004174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004174 DAFVNP010000105.1 Protein Homology CDS 13390 13854 . - 0 ID=cds-HBQ7392201.1;Parent=gene-L8R42_004174;Dbxref=NCBI_GP:HBQ7392201.1;Name=HBQ7392201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=L8R42_004174;product=hypothetical protein;protein_id=HBQ7392201.1;transl_table=11 ##sequence-region DAFVNP010000106.1 1 14608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000106.1 tpg region 1 14608 . + . ID=DAFVNP010000106.1:1..14608;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000106.1 tpg gene 1 1181 . - . ID=gene-L8R42_004175;Name=L8R42_004175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004175;partial=true;start_range=.,1 DAFVNP010000106.1 Protein Homology CDS 1 1181 . - 0 ID=cds-HBQ7392202.1;Parent=gene-L8R42_004175;Dbxref=NCBI_GP:HBQ7392202.1;Name=HBQ7392202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=L8R42_004175;partial=true;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=HBQ7392202.1;start_range=.,1;transl_table=11 DAFVNP010000106.1 tpg gene 1242 1553 . - . ID=gene-L8R42_004176;Name=L8R42_004176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004176 DAFVNP010000106.1 Protein Homology CDS 1242 1553 . - 0 ID=cds-HBQ7392203.1;Parent=gene-L8R42_004176;Dbxref=NCBI_GP:HBQ7392203.1;Name=HBQ7392203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=L8R42_004176;product=reverse transcriptase;protein_id=HBQ7392203.1;transl_table=11 DAFVNP010000106.1 tpg gene 1457 1723 . + . ID=gene-L8R42_004177;Name=L8R42_004177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004177 DAFVNP010000106.1 Protein Homology CDS 1457 1723 . + 0 ID=cds-HBQ7392204.1;Parent=gene-L8R42_004177;Dbxref=NCBI_GP:HBQ7392204.1;Name=HBQ7392204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964583.1;locus_tag=L8R42_004177;product=DUF333 domain-containing protein;protein_id=HBQ7392204.1;transl_table=11 DAFVNP010000106.1 tpg gene 1767 2177 . - . ID=gene-L8R42_004178;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=L8R42_004178 DAFVNP010000106.1 Protein Homology CDS 1767 2177 . - 0 ID=cds-HBQ7392205.1;Parent=gene-L8R42_004178;Dbxref=NCBI_GP:HBQ7392205.1;Name=HBQ7392205.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=L8R42_004178;product=heat shock protein HslJ;protein_id=HBQ7392205.1;transl_table=11 DAFVNP010000106.1 tpg gene 2288 3277 . - . ID=gene-L8R42_004179;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=L8R42_004179 DAFVNP010000106.1 Protein Homology CDS 2288 3277 . - 0 ID=cds-HBQ7392206.1;Parent=gene-L8R42_004179;Dbxref=NCBI_GP:HBQ7392206.1;Name=HBQ7392206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=L8R42_004179;product=D-lactate dehydrogenase;protein_id=HBQ7392206.1;transl_table=11 DAFVNP010000106.1 tpg gene 3544 6180 . + . ID=gene-L8R42_004180;Name=L8R42_004180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004180 DAFVNP010000106.1 Protein Homology CDS 3544 6180 . + 0 ID=cds-HBQ7392207.1;Parent=gene-L8R42_004180;Dbxref=NCBI_GP:HBQ7392207.1;Name=HBQ7392207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=L8R42_004180;product=YdbH family protein;protein_id=HBQ7392207.1;transl_table=11 DAFVNP010000106.1 tpg gene 6180 6371 . + . ID=gene-L8R42_004181;Name=L8R42_004181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004181 DAFVNP010000106.1 Protein Homology CDS 6180 6371 . + 0 ID=cds-HBQ7392208.1;Parent=gene-L8R42_004181;Dbxref=NCBI_GP:HBQ7392208.1;Name=HBQ7392208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=L8R42_004181;product=YnbE family lipoprotein;protein_id=HBQ7392208.1;transl_table=11 DAFVNP010000106.1 tpg gene 6379 6702 . + . ID=gene-L8R42_004182;Name=L8R42_004182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004182 DAFVNP010000106.1 Protein Homology CDS 6379 6702 . + 0 ID=cds-HBQ7392209.1;Parent=gene-L8R42_004182;Dbxref=NCBI_GP:HBQ7392209.1;Name=HBQ7392209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=L8R42_004182;product=YdbL family protein;protein_id=HBQ7392209.1;transl_table=11 DAFVNP010000106.1 tpg gene 6845 7294 . + . ID=gene-L8R42_004183;Name=L8R42_004183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004183 DAFVNP010000106.1 Protein Homology CDS 6845 7294 . + 0 ID=cds-HBQ7392210.1;Parent=gene-L8R42_004183;Dbxref=NCBI_GP:HBQ7392210.1;Name=HBQ7392210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=L8R42_004183;product=GFA family protein;protein_id=HBQ7392210.1;transl_table=11 DAFVNP010000106.1 tpg gene 7291 7896 . - . ID=gene-L8R42_004184;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=L8R42_004184 DAFVNP010000106.1 Protein Homology CDS 7291 7896 . - 0 ID=cds-HBQ7392211.1;Parent=gene-L8R42_004184;Dbxref=NCBI_GP:HBQ7392211.1;Name=HBQ7392211.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=L8R42_004184;product=FMN-dependent NADH-azoreductase;protein_id=HBQ7392211.1;transl_table=11 DAFVNP010000106.1 tpg gene 8097 11999 . + . ID=gene-L8R42_004185;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=L8R42_004185 DAFVNP010000106.1 Protein Homology CDS 8097 11999 . + 0 ID=cds-HBQ7392212.1;Parent=gene-L8R42_004185;Dbxref=NCBI_GP:HBQ7392212.1;Name=HBQ7392212.1;gbkey=CDS;gene=hrpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=L8R42_004185;product=ATP-dependent RNA helicase HrpA;protein_id=HBQ7392212.1;transl_table=11 DAFVNP010000106.1 tpg gene 12063 12863 . + . ID=gene-L8R42_004186;Name=L8R42_004186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004186 DAFVNP010000106.1 Protein Homology CDS 12063 12863 . + 0 ID=cds-HBQ7392213.1;Parent=gene-L8R42_004186;Dbxref=NCBI_GP:HBQ7392213.1;Name=HBQ7392213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=L8R42_004186;product=YdcF family protein;protein_id=HBQ7392213.1;transl_table=11 DAFVNP010000106.1 tpg gene 12980 13510 . + . ID=gene-L8R42_004187;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=L8R42_004187 DAFVNP010000106.1 Protein Homology CDS 12980 13510 . + 0 ID=cds-HBQ7392214.1;Parent=gene-L8R42_004187;Dbxref=NCBI_GP:HBQ7392214.1;Name=HBQ7392214.1;gbkey=CDS;gene=cybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=L8R42_004187;product=cytochrome b561;protein_id=HBQ7392214.1;transl_table=11 DAFVNP010000106.1 tpg gene 13781 14443 . - . ID=gene-L8R42_004188;Name=L8R42_004188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004188 DAFVNP010000106.1 Protein Homology CDS 13781 14443 . - 0 ID=cds-HBQ7392215.1;Parent=gene-L8R42_004188;Dbxref=NCBI_GP:HBQ7392215.1;Name=HBQ7392215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=L8R42_004188;product=class I SAM-dependent methyltransferase;protein_id=HBQ7392215.1;transl_table=11 ##sequence-region DAFVNP010000107.1 1 14406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000107.1 tpg region 1 14406 . + . ID=DAFVNP010000107.1:1..14406;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000107.1 tpg gene 2 94 . - . ID=gene-L8R42_004189;Name=L8R42_004189;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004189 DAFVNP010000107.1 tRNAscan-SE tRNA 2 94 . - . ID=rna-L8R42_004189;Parent=gene-L8R42_004189;anticodon=(pos:complement(58..60));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004189;product=tRNA-Ser DAFVNP010000107.1 tRNAscan-SE exon 2 94 . - . ID=exon-L8R42_004189-1;Parent=rna-L8R42_004189;anticodon=(pos:complement(58..60));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004189;product=tRNA-Ser DAFVNP010000107.1 tpg gene 398 583 . - . ID=gene-L8R42_004190;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=L8R42_004190 DAFVNP010000107.1 Protein Homology CDS 398 583 . - 0 ID=cds-HBQ7392216.1;Parent=gene-L8R42_004190;Dbxref=NCBI_GP:HBQ7392216.1;Name=HBQ7392216.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=L8R42_004190;product=carbon storage regulator CsrA;protein_id=HBQ7392216.1;transl_table=11 DAFVNP010000107.1 tpg gene 818 3448 . - . ID=gene-L8R42_004191;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=L8R42_004191 DAFVNP010000107.1 Protein Homology CDS 818 3448 . - 0 ID=cds-HBQ7392217.1;Parent=gene-L8R42_004191;Dbxref=NCBI_GP:HBQ7392217.1;Name=HBQ7392217.1;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=L8R42_004191;product=alanine--tRNA ligase;protein_id=HBQ7392217.1;transl_table=11 DAFVNP010000107.1 tpg gene 3684 4184 . - . ID=gene-L8R42_004192;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=L8R42_004192 DAFVNP010000107.1 Protein Homology CDS 3684 4184 . - 0 ID=cds-HBQ7392218.1;Parent=gene-L8R42_004192;Dbxref=NCBI_GP:HBQ7392218.1;Name=HBQ7392218.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=L8R42_004192;product=recombination regulator RecX;protein_id=HBQ7392218.1;transl_table=11 DAFVNP010000107.1 tpg gene 4301 5362 . - . ID=gene-L8R42_004193;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=L8R42_004193 DAFVNP010000107.1 Protein Homology CDS 4301 5362 . - 0 ID=cds-HBQ7392219.1;Parent=gene-L8R42_004193;Dbxref=NCBI_GP:HBQ7392219.1;Name=HBQ7392219.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=L8R42_004193;product=recombinase RecA;protein_id=HBQ7392219.1;transl_table=11 DAFVNP010000107.1 tpg gene 5447 5944 . - . ID=gene-L8R42_004194;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=L8R42_004194 DAFVNP010000107.1 Protein Homology CDS 5447 5944 . - 0 ID=cds-HBQ7392220.1;Parent=gene-L8R42_004194;Dbxref=NCBI_GP:HBQ7392220.1;Name=HBQ7392220.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=L8R42_004194;product=nicotinamide-nucleotide amidase;protein_id=HBQ7392220.1;transl_table=11 DAFVNP010000107.1 tpg gene 6423 7502 . - . ID=gene-L8R42_004195;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=L8R42_004195 DAFVNP010000107.1 Protein Homology CDS 6423 7502 . - 0 ID=cds-HBQ7392221.1;Parent=gene-L8R42_004195;Dbxref=NCBI_GP:HBQ7392221.1;Name=HBQ7392221.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=L8R42_004195;product=lytic murein transglycosylase B;protein_id=HBQ7392221.1;transl_table=11 DAFVNP010000107.1 tpg gene 7756 8319 . + . ID=gene-L8R42_004196;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=L8R42_004196 DAFVNP010000107.1 Protein Homology CDS 7756 8319 . + 0 ID=cds-HBQ7392222.1;Parent=gene-L8R42_004196;Dbxref=NCBI_GP:HBQ7392222.1;Name=HBQ7392222.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=L8R42_004196;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=HBQ7392222.1;transl_table=11 DAFVNP010000107.1 tpg gene 8316 9287 . + . ID=gene-L8R42_004197;Name=L8R42_004197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004197 DAFVNP010000107.1 Protein Homology CDS 8316 9287 . + 0 ID=cds-HBQ7392223.1;Parent=gene-L8R42_004197;Dbxref=NCBI_GP:HBQ7392223.1;Name=HBQ7392223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=L8R42_004197;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=HBQ7392223.1;transl_table=11 DAFVNP010000107.1 tpg gene 9299 9661 . + . ID=gene-L8R42_004198;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=L8R42_004198 DAFVNP010000107.1 Protein Homology CDS 9299 9661 . + 0 ID=cds-HBQ7392224.1;Parent=gene-L8R42_004198;Dbxref=NCBI_GP:HBQ7392224.1;Name=HBQ7392224.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=L8R42_004198;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=HBQ7392224.1;transl_table=11 DAFVNP010000107.1 tpg gene 9673 10452 . + . ID=gene-L8R42_004199;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=L8R42_004199 DAFVNP010000107.1 Protein Homology CDS 9673 10452 . + 0 ID=cds-HBQ7392225.1;Parent=gene-L8R42_004199;Dbxref=NCBI_GP:HBQ7392225.1;Name=HBQ7392225.1;gbkey=CDS;gene=srlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=L8R42_004199;product=sorbitol-6-phosphate dehydrogenase;protein_id=HBQ7392225.1;transl_table=11 DAFVNP010000107.1 tpg gene 10529 10888 . + . ID=gene-L8R42_004200;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=L8R42_004200 DAFVNP010000107.1 Protein Homology CDS 10529 10888 . + 0 ID=cds-HBQ7392226.1;Parent=gene-L8R42_004200;Dbxref=NCBI_GP:HBQ7392226.1;Name=HBQ7392226.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=L8R42_004200;product=transcriptional regulator GutM;protein_id=HBQ7392226.1;transl_table=11 DAFVNP010000107.1 tpg gene 11086 11859 . + . ID=gene-L8R42_004201;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=L8R42_004201 DAFVNP010000107.1 Protein Homology CDS 11086 11859 . + 0 ID=cds-HBQ7392227.1;Parent=gene-L8R42_004201;Dbxref=NCBI_GP:HBQ7392227.1;Name=HBQ7392227.1;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=L8R42_004201;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=HBQ7392227.1;transl_table=11 DAFVNP010000107.1 tpg gene 11852 12817 . + . ID=gene-L8R42_004202;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=L8R42_004202 DAFVNP010000107.1 Protein Homology CDS 11852 12817 . + 0 ID=cds-HBQ7392228.1;Parent=gene-L8R42_004202;Dbxref=NCBI_GP:HBQ7392228.1;Name=HBQ7392228.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=L8R42_004202;product=arabinose-5-phosphate isomerase GutQ;protein_id=HBQ7392228.1;transl_table=11 DAFVNP010000107.1 tpg gene 12814 14334 . - . ID=gene-L8R42_004203;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=L8R42_004203 DAFVNP010000107.1 Protein Homology CDS 12814 14334 . - 0 ID=cds-HBQ7392229.1;Parent=gene-L8R42_004203;Dbxref=NCBI_GP:HBQ7392229.1;Name=HBQ7392229.1;gbkey=CDS;gene=norR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=L8R42_004203;product=nitric oxide reductase transcriptional regulator NorR;protein_id=HBQ7392229.1;transl_table=11 ##sequence-region DAFVNP010000108.1 1 14329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000108.1 tpg region 1 14329 . + . ID=DAFVNP010000108.1:1..14329;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000108.1 tpg gene 48 2453 . + . ID=gene-L8R42_004204;Name=L8R42_004204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004204 DAFVNP010000108.1 Protein Homology CDS 48 2453 . + 0 ID=cds-HBQ7392230.1;Parent=gene-L8R42_004204;Dbxref=NCBI_GP:HBQ7392230.1;Name=HBQ7392230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=L8R42_004204;product=molybdopterin-dependent oxidoreductase;protein_id=HBQ7392230.1;transl_table=11 DAFVNP010000108.1 tpg gene 2450 3079 . + . ID=gene-L8R42_004205;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=L8R42_004205 DAFVNP010000108.1 Protein Homology CDS 2450 3079 . + 0 ID=cds-HBQ7392231.1;Parent=gene-L8R42_004205;Dbxref=NCBI_GP:HBQ7392231.1;Name=HBQ7392231.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=L8R42_004205;product=dimethylsulfoxide reductase subunit B;protein_id=HBQ7392231.1;transl_table=11 DAFVNP010000108.1 tpg gene 3072 3881 . + . ID=gene-L8R42_004206;Name=L8R42_004206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004206 DAFVNP010000108.1 Protein Homology CDS 3072 3881 . + 0 ID=cds-HBQ7392232.1;Parent=gene-L8R42_004206;Dbxref=NCBI_GP:HBQ7392232.1;Name=HBQ7392232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=L8R42_004206;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HBQ7392232.1;transl_table=11 DAFVNP010000108.1 tpg gene 3881 4744 . + . ID=gene-L8R42_004207;Name=L8R42_004207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004207 DAFVNP010000108.1 Protein Homology CDS 3881 4744 . + 0 ID=cds-HBQ7392233.1;Parent=gene-L8R42_004207;Dbxref=NCBI_GP:HBQ7392233.1;Name=HBQ7392233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=L8R42_004207;product=4Fe-4S binding protein;protein_id=HBQ7392233.1;transl_table=11 DAFVNP010000108.1 tpg gene 4865 5296 . + . ID=gene-L8R42_004208;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=L8R42_004208 DAFVNP010000108.1 Protein Homology CDS 4865 5296 . + 0 ID=cds-HBQ7392234.1;Parent=gene-L8R42_004208;Dbxref=NCBI_GP:HBQ7392234.1;Name=HBQ7392234.1;gbkey=CDS;gene=ndk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=L8R42_004208;product=nucleoside-diphosphate kinase;protein_id=HBQ7392234.1;transl_table=11 DAFVNP010000108.1 tpg gene 5503 6669 . + . ID=gene-L8R42_004209;Name=trmG/rlmN;gbkey=Gene;gene=trmG/rlmN;gene_biotype=protein_coding;locus_tag=L8R42_004209 DAFVNP010000108.1 Protein Homology CDS 5503 6669 . + 0 ID=cds-HBQ7392235.1;Parent=gene-L8R42_004209;Dbxref=NCBI_GP:HBQ7392235.1;Name=HBQ7392235.1;gbkey=CDS;gene=trmG/rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=L8R42_004209;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=HBQ7392235.1;transl_table=11 DAFVNP010000108.1 tpg gene 6961 7965 . + . ID=gene-L8R42_004210;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=L8R42_004210 DAFVNP010000108.1 Protein Homology CDS 6961 7965 . + 0 ID=cds-HBQ7392236.1;Parent=gene-L8R42_004210;Dbxref=NCBI_GP:HBQ7392236.1;Name=HBQ7392236.1;gbkey=CDS;gene=rodZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=L8R42_004210;product=cytoskeleton protein RodZ;protein_id=HBQ7392236.1;transl_table=11 DAFVNP010000108.1 tpg gene 7992 9110 . + . ID=gene-L8R42_004211;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=L8R42_004211 DAFVNP010000108.1 Protein Homology CDS 7992 9110 . + 0 ID=cds-HBQ7392237.1;Parent=gene-L8R42_004211;Dbxref=NCBI_GP:HBQ7392237.1;Name=HBQ7392237.1;gbkey=CDS;gene=ispG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=L8R42_004211;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=HBQ7392237.1;transl_table=11 DAFVNP010000108.1 tpg gene 9221 10495 . + . ID=gene-L8R42_004212;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=L8R42_004212 DAFVNP010000108.1 Protein Homology CDS 9221 10495 . + 0 ID=cds-HBQ7392238.1;Parent=gene-L8R42_004212;Dbxref=NCBI_GP:HBQ7392238.1;Name=HBQ7392238.1;gbkey=CDS;gene=hisS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=L8R42_004212;product=histidine--tRNA ligase;protein_id=HBQ7392238.1;transl_table=11 DAFVNP010000108.1 tpg gene 10509 11129 . + . ID=gene-L8R42_004213;Name=L8R42_004213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004213 DAFVNP010000108.1 Protein Homology CDS 10509 11129 . + 0 ID=cds-HBQ7392239.1;Parent=gene-L8R42_004213;Dbxref=NCBI_GP:HBQ7392239.1;Name=HBQ7392239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=L8R42_004213;product=YfgM family protein;protein_id=HBQ7392239.1;transl_table=11 DAFVNP010000108.1 tpg gene 11140 12318 . + . ID=gene-L8R42_004214;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=L8R42_004214 DAFVNP010000108.1 Protein Homology CDS 11140 12318 . + 0 ID=cds-HBQ7392240.1;Parent=gene-L8R42_004214;Dbxref=NCBI_GP:HBQ7392240.1;Name=HBQ7392240.1;gbkey=CDS;gene=bamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=L8R42_004214;product=outer membrane protein assembly factor BamB;protein_id=HBQ7392240.1;transl_table=11 DAFVNP010000108.1 tpg gene 12435 13907 . + . ID=gene-L8R42_004215;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=L8R42_004215 DAFVNP010000108.1 Protein Homology CDS 12435 13907 . + 0 ID=cds-HBQ7392241.1;Parent=gene-L8R42_004215;Dbxref=NCBI_GP:HBQ7392241.1;Name=HBQ7392241.1;gbkey=CDS;gene=der;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=L8R42_004215;product=ribosome biogenesis GTPase Der;protein_id=HBQ7392241.1;transl_table=11 DAFVNP010000108.1 tpg gene 13996 14217 . + . ID=gene-L8R42_004216;Name=L8R42_004216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004216 DAFVNP010000108.1 Protein Homology CDS 13996 14217 . + 0 ID=cds-HBQ7392242.1;Parent=gene-L8R42_004216;Dbxref=NCBI_GP:HBQ7392242.1;Name=HBQ7392242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=L8R42_004216;product=zinc ribbon domain-containing protein;protein_id=HBQ7392242.1;transl_table=11 ##sequence-region DAFVNP010000109.1 1 14093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000109.1 tpg region 1 14093 . + . ID=DAFVNP010000109.1:1..14093;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000109.1 tpg gene 1 877 . + . ID=gene-L8R42_004217;Name=L8R42_004217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004217;partial=true;start_range=.,1 DAFVNP010000109.1 Protein Homology CDS 1 877 . + 1 ID=cds-HBQ7392243.1;Parent=gene-L8R42_004217;Dbxref=NCBI_GP:HBQ7392243.1;Name=HBQ7392243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=L8R42_004217;partial=true;product=lysine exporter LysO family protein;protein_id=HBQ7392243.1;start_range=.,1;transl_table=11 DAFVNP010000109.1 tpg gene 1021 2673 . + . ID=gene-L8R42_004218;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=L8R42_004218 DAFVNP010000109.1 Protein Homology CDS 1021 2673 . + 0 ID=cds-HBQ7392244.1;Parent=gene-L8R42_004218;Dbxref=NCBI_GP:HBQ7392244.1;Name=HBQ7392244.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=L8R42_004218;product=hydroxylamine reductase;protein_id=HBQ7392244.1;transl_table=11 DAFVNP010000109.1 tpg gene 2685 3653 . + . ID=gene-L8R42_004219;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=L8R42_004219 DAFVNP010000109.1 Protein Homology CDS 2685 3653 . + 0 ID=cds-HBQ7392245.1;Parent=gene-L8R42_004219;Dbxref=NCBI_GP:HBQ7392245.1;Name=HBQ7392245.1;gbkey=CDS;gene=hcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=L8R42_004219;product=NADH oxidoreductase;protein_id=HBQ7392245.1;transl_table=11 DAFVNP010000109.1 tpg gene 3811 5529 . + . ID=gene-L8R42_004220;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=L8R42_004220 DAFVNP010000109.1 Protein Homology CDS 3811 5529 . + 0 ID=cds-HBQ7392246.1;Parent=gene-L8R42_004220;Dbxref=NCBI_GP:HBQ7392246.1;Name=HBQ7392246.1;gbkey=CDS;gene=poxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=L8R42_004220;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=HBQ7392246.1;transl_table=11 DAFVNP010000109.1 tpg gene 5568 6569 . + . ID=gene-L8R42_004221;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=L8R42_004221 DAFVNP010000109.1 Protein Homology CDS 5568 6569 . + 0 ID=cds-HBQ7392247.1;Parent=gene-L8R42_004221;Dbxref=NCBI_GP:HBQ7392247.1;Name=HBQ7392247.1;gbkey=CDS;gene=ltaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=L8R42_004221;product=low-specificity L-threonine aldolase;protein_id=HBQ7392247.1;transl_table=11 DAFVNP010000109.1 tpg gene 6580 8013 . + . ID=gene-L8R42_004222;Name=L8R42_004222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004222 DAFVNP010000109.1 Protein Homology CDS 6580 8013 . + 0 ID=cds-HBQ7392248.1;Parent=gene-L8R42_004222;Dbxref=NCBI_GP:HBQ7392248.1;Name=HBQ7392248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=L8R42_004222;product=DUF2867 domain-containing protein;protein_id=HBQ7392248.1;transl_table=11 DAFVNP010000109.1 tpg gene 8109 9122 . + . ID=gene-L8R42_004223;Name=L8R42_004223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004223 DAFVNP010000109.1 Protein Homology CDS 8109 9122 . + 0 ID=cds-HBQ7392249.1;Parent=gene-L8R42_004223;Dbxref=NCBI_GP:HBQ7392249.1;Name=HBQ7392249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=L8R42_004223;product=NAD(P)-dependent oxidoreductase;protein_id=HBQ7392249.1;transl_table=11 DAFVNP010000109.1 tpg gene 9119 9949 . - . ID=gene-L8R42_004224;Name=L8R42_004224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004224 DAFVNP010000109.1 Protein Homology CDS 9119 9949 . - 0 ID=cds-HBQ7392250.1;Parent=gene-L8R42_004224;Dbxref=NCBI_GP:HBQ7392250.1;Name=HBQ7392250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=L8R42_004224;product=N-acetylmuramoyl-L-alanine amidase;protein_id=HBQ7392250.1;transl_table=11 DAFVNP010000109.1 tpg gene 9946 10269 . - . ID=gene-L8R42_004225;Name=L8R42_004225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004225 DAFVNP010000109.1 Protein Homology CDS 9946 10269 . - 0 ID=cds-HBQ7392251.1;Parent=gene-L8R42_004225;Dbxref=NCBI_GP:HBQ7392251.1;Name=HBQ7392251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=L8R42_004225;product=heavy metal-binding domain-containing protein;protein_id=HBQ7392251.1;transl_table=11 DAFVNP010000109.1 tpg gene 10397 10912 . + . ID=gene-L8R42_004226;Name=L8R42_004226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004226 DAFVNP010000109.1 Protein Homology CDS 10397 10912 . + 0 ID=cds-HBQ7392252.1;Parent=gene-L8R42_004226;Dbxref=NCBI_GP:HBQ7392252.1;Name=HBQ7392252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=L8R42_004226;product=lipoprotein;protein_id=HBQ7392252.1;transl_table=11 DAFVNP010000109.1 tpg gene 11141 11869 . + . ID=gene-L8R42_004227;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=L8R42_004227 DAFVNP010000109.1 Protein Homology CDS 11141 11869 . + 0 ID=cds-HBQ7392253.1;Parent=gene-L8R42_004227;Dbxref=NCBI_GP:HBQ7392253.1;Name=HBQ7392253.1;gbkey=CDS;gene=artP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=L8R42_004227;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=HBQ7392253.1;transl_table=11 DAFVNP010000109.1 tpg gene 11887 12618 . + . ID=gene-L8R42_004228;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=L8R42_004228 DAFVNP010000109.1 Protein Homology CDS 11887 12618 . + 0 ID=cds-HBQ7392254.1;Parent=gene-L8R42_004228;Dbxref=NCBI_GP:HBQ7392254.1;Name=HBQ7392254.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=L8R42_004228;product=arginine ABC transporter substrate-binding protein;protein_id=HBQ7392254.1;transl_table=11 DAFVNP010000109.1 tpg gene 12625 13341 . + . ID=gene-L8R42_004229;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=L8R42_004229 DAFVNP010000109.1 Protein Homology CDS 12625 13341 . + 0 ID=cds-HBQ7392255.1;Parent=gene-L8R42_004229;Dbxref=NCBI_GP:HBQ7392255.1;Name=HBQ7392255.1;gbkey=CDS;gene=artQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=L8R42_004229;product=arginine ABC transporter permease ArtQ;protein_id=HBQ7392255.1;transl_table=11 DAFVNP010000109.1 tpg gene 13341 14009 . + . ID=gene-L8R42_004230;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=L8R42_004230 DAFVNP010000109.1 Protein Homology CDS 13341 14009 . + 0 ID=cds-HBQ7392256.1;Parent=gene-L8R42_004230;Dbxref=NCBI_GP:HBQ7392256.1;Name=HBQ7392256.1;gbkey=CDS;gene=artM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=L8R42_004230;product=arginine ABC transporter permease ArtM;protein_id=HBQ7392256.1;transl_table=11 ##sequence-region DAFVNP010000110.1 1 13937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000110.1 tpg region 1 13937 . + . ID=DAFVNP010000110.1:1..13937;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000110.1 tpg gene 280 972 . + . ID=gene-L8R42_004231;Name=L8R42_004231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004231 DAFVNP010000110.1 Protein Homology CDS 280 972 . + 0 ID=cds-HBQ7392257.1;Parent=gene-L8R42_004231;Dbxref=NCBI_GP:HBQ7392257.1;Name=HBQ7392257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691472.1;locus_tag=L8R42_004231;product=hypothetical protein;protein_id=HBQ7392257.1;transl_table=11 DAFVNP010000110.1 tpg gene 1323 3737 . - . ID=gene-L8R42_004232;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=L8R42_004232 DAFVNP010000110.1 Protein Homology CDS 1323 3737 . - 0 ID=cds-HBQ7392258.1;Parent=gene-L8R42_004232;Dbxref=NCBI_GP:HBQ7392258.1;Name=HBQ7392258.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=L8R42_004232;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=HBQ7392258.1;transl_table=11 DAFVNP010000110.1 tpg gene 3766 4839 . - . ID=gene-L8R42_004233;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=L8R42_004233 DAFVNP010000110.1 Protein Homology CDS 3766 4839 . - 0 ID=cds-HBQ7392259.1;Parent=gene-L8R42_004233;Dbxref=NCBI_GP:HBQ7392259.1;Name=HBQ7392259.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=L8R42_004233;product=DNA replication/repair protein RecF;protein_id=HBQ7392259.1;transl_table=11 DAFVNP010000110.1 tpg gene 4987 6087 . - . ID=gene-L8R42_004234;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=L8R42_004234 DAFVNP010000110.1 Protein Homology CDS 4987 6087 . - 0 ID=cds-HBQ7392260.1;Parent=gene-L8R42_004234;Dbxref=NCBI_GP:HBQ7392260.1;Name=HBQ7392260.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=L8R42_004234;product=DNA polymerase III subunit beta;protein_id=HBQ7392260.1;transl_table=11 DAFVNP010000110.1 tpg gene 6092 7492 . - . ID=gene-L8R42_004235;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=L8R42_004235 DAFVNP010000110.1 Protein Homology CDS 6092 7492 . - 0 ID=cds-HBQ7392261.1;Parent=gene-L8R42_004235;Dbxref=NCBI_GP:HBQ7392261.1;Name=HBQ7392261.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=L8R42_004235;product=chromosomal replication initiator protein DnaA;protein_id=HBQ7392261.1;transl_table=11 DAFVNP010000110.1 tpg gene 8153 8293 . + . ID=gene-L8R42_004236;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=L8R42_004236 DAFVNP010000110.1 Protein Homology CDS 8153 8293 . + 0 ID=cds-HBQ7392262.1;Parent=gene-L8R42_004236;Dbxref=NCBI_GP:HBQ7392262.1;Name=HBQ7392262.1;gbkey=CDS;gene=rpmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=L8R42_004236;product=50S ribosomal protein L34;protein_id=HBQ7392262.1;transl_table=11 DAFVNP010000110.1 tpg gene 8310 8669 . + . ID=gene-L8R42_004237;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=L8R42_004237 DAFVNP010000110.1 Protein Homology CDS 8310 8669 . + 0 ID=cds-HBQ7392263.1;Parent=gene-L8R42_004237;Dbxref=NCBI_GP:HBQ7392263.1;Name=HBQ7392263.1;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=L8R42_004237;product=ribonuclease P protein component;protein_id=HBQ7392263.1;transl_table=11 DAFVNP010000110.1 tpg gene 8633 8890 . + . ID=gene-L8R42_004238;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=L8R42_004238 DAFVNP010000110.1 Protein Homology CDS 8633 8890 . + 0 ID=cds-HBQ7392264.1;Parent=gene-L8R42_004238;Dbxref=NCBI_GP:HBQ7392264.1;Name=HBQ7392264.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=L8R42_004238;product=membrane protein insertion efficiency factor YidD;protein_id=HBQ7392264.1;transl_table=11 DAFVNP010000110.1 tpg gene 8893 10539 . + . ID=gene-L8R42_004239;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=L8R42_004239 DAFVNP010000110.1 Protein Homology CDS 8893 10539 . + 0 ID=cds-HBQ7392265.1;Parent=gene-L8R42_004239;Dbxref=NCBI_GP:HBQ7392265.1;Name=HBQ7392265.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=L8R42_004239;product=membrane protein insertase YidC;protein_id=HBQ7392265.1;transl_table=11 DAFVNP010000110.1 tpg gene 10680 12044 . + . ID=gene-L8R42_004240;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=L8R42_004240 DAFVNP010000110.1 Protein Homology CDS 10680 12044 . + 0 ID=cds-HBQ7392266.1;Parent=gene-L8R42_004240;Dbxref=NCBI_GP:HBQ7392266.1;Name=HBQ7392266.1;gbkey=CDS;gene=mnmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=L8R42_004240;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=HBQ7392266.1;transl_table=11 DAFVNP010000110.1 tpg gene 12248 13465 . + . ID=gene-L8R42_004241;Name=L8R42_004241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004241 DAFVNP010000110.1 Protein Homology CDS 12248 13465 . + 0 ID=cds-HBQ7392267.1;Parent=gene-L8R42_004241;Dbxref=NCBI_GP:HBQ7392267.1;Name=HBQ7392267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008222348.1;locus_tag=L8R42_004241;product=site-specific integrase;protein_id=HBQ7392267.1;transl_table=11 DAFVNP010000110.1 tpg gene 13462 13830 . - . ID=gene-L8R42_004242;Name=L8R42_004242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004242 DAFVNP010000110.1 Protein Homology CDS 13462 13830 . - 0 ID=cds-HBQ7392268.1;Parent=gene-L8R42_004242;Dbxref=NCBI_GP:HBQ7392268.1;Name=HBQ7392268.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.1;locus_tag=L8R42_004242;product=helix-turn-helix domain-containing protein;protein_id=HBQ7392268.1;transl_table=11 ##sequence-region DAFVNP010000111.1 1 13863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000111.1 tpg region 1 13863 . + . ID=DAFVNP010000111.1:1..13863;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000111.1 tpg gene 168 926 . + . ID=gene-L8R42_004243;Name=L8R42_004243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004243 DAFVNP010000111.1 Protein Homology CDS 168 926 . + 0 ID=cds-HBQ7392269.1;Parent=gene-L8R42_004243;Dbxref=NCBI_GP:HBQ7392269.1;Name=HBQ7392269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=L8R42_004243;product=YdiY family protein;protein_id=HBQ7392269.1;transl_table=11 DAFVNP010000111.1 tpg gene 975 1934 . - . ID=gene-L8R42_004244;Name=L8R42_004244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004244 DAFVNP010000111.1 Protein Homology CDS 975 1934 . - 0 ID=cds-HBQ7392270.1;Parent=gene-L8R42_004244;Dbxref=NCBI_GP:HBQ7392270.1;Name=HBQ7392270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=L8R42_004244;product=lipid A deacylase LpxR family protein;protein_id=HBQ7392270.1;transl_table=11 DAFVNP010000111.1 tpg gene 2077 2325 . + . ID=gene-L8R42_004245;Name=L8R42_004245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004245 DAFVNP010000111.1 Protein Homology CDS 2077 2325 . + 0 ID=cds-HBQ7392271.1;Parent=gene-L8R42_004245;Dbxref=NCBI_GP:HBQ7392271.1;Name=HBQ7392271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916597.1;locus_tag=L8R42_004245;product=hypothetical protein;protein_id=HBQ7392271.1;transl_table=11 DAFVNP010000111.1 tpg gene 2388 3242 . + . ID=gene-L8R42_004246;Name=L8R42_004246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004246 DAFVNP010000111.1 Protein Homology CDS 2388 3242 . + 0 ID=cds-HBQ7392272.1;Parent=gene-L8R42_004246;Dbxref=NCBI_GP:HBQ7392272.1;Name=HBQ7392272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=L8R42_004246;product=DNA/RNA non-specific endonuclease;protein_id=HBQ7392272.1;transl_table=11 DAFVNP010000111.1 tpg gene 3502 5430 . + . ID=gene-L8R42_004247;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=L8R42_004247 DAFVNP010000111.1 Protein Homology CDS 3502 5430 . + 0 ID=cds-HBQ7392273.1;Parent=gene-L8R42_004247;Dbxref=NCBI_GP:HBQ7392273.1;Name=HBQ7392273.1;gbkey=CDS;gene=thrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=L8R42_004247;product=threonine--tRNA ligase;protein_id=HBQ7392273.1;transl_table=11 DAFVNP010000111.1 tpg gene 5434 5976 . + . ID=gene-L8R42_004248;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=L8R42_004248 DAFVNP010000111.1 Protein Homology CDS 5434 5976 . + 0 ID=cds-HBQ7392274.1;Parent=gene-L8R42_004248;Dbxref=NCBI_GP:HBQ7392274.1;Name=HBQ7392274.1;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=L8R42_004248;product=translation initiation factor IF-3;protein_id=HBQ7392274.1;transl_table=11 DAFVNP010000111.1 tpg gene 6072 6269 . + . ID=gene-L8R42_004249;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=L8R42_004249 DAFVNP010000111.1 Protein Homology CDS 6072 6269 . + 0 ID=cds-HBQ7392275.1;Parent=gene-L8R42_004249;Dbxref=NCBI_GP:HBQ7392275.1;Name=HBQ7392275.1;gbkey=CDS;gene=rpmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=L8R42_004249;product=50S ribosomal protein L35;protein_id=HBQ7392275.1;transl_table=11 DAFVNP010000111.1 tpg gene 6320 6676 . + . ID=gene-L8R42_004250;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=L8R42_004250 DAFVNP010000111.1 Protein Homology CDS 6320 6676 . + 0 ID=cds-HBQ7392276.1;Parent=gene-L8R42_004250;Dbxref=NCBI_GP:HBQ7392276.1;Name=HBQ7392276.1;gbkey=CDS;gene=rplT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=L8R42_004250;product=50S ribosomal protein L20;protein_id=HBQ7392276.1;transl_table=11 DAFVNP010000111.1 cmsearch sequence_feature 6792 6915 . + . ID=id-DAFVNP010000111.1:6792..6915;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 DAFVNP010000111.1 tpg gene 6797 6841 . + . ID=gene-L8R42_004251;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=L8R42_004251 DAFVNP010000111.1 Protein Homology CDS 6797 6841 . + 0 ID=cds-HBQ7392277.1;Parent=gene-L8R42_004251;Dbxref=NCBI_GP:HBQ7392277.1;Name=HBQ7392277.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=L8R42_004251;product=pheST operon leader peptide PheM;protein_id=HBQ7392277.1;transl_table=11 DAFVNP010000111.1 tpg gene 6978 7961 . + . ID=gene-L8R42_004252;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=L8R42_004252 DAFVNP010000111.1 Protein Homology CDS 6978 7961 . + 0 ID=cds-HBQ7392278.1;Parent=gene-L8R42_004252;Dbxref=NCBI_GP:HBQ7392278.1;Name=HBQ7392278.1;gbkey=CDS;gene=pheS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=L8R42_004252;product=phenylalanine--tRNA ligase subunit alpha;protein_id=HBQ7392278.1;transl_table=11 DAFVNP010000111.1 tpg gene 7977 10364 . + . ID=gene-L8R42_004253;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=L8R42_004253 DAFVNP010000111.1 Protein Homology CDS 7977 10364 . + 0 ID=cds-HBQ7392279.1;Parent=gene-L8R42_004253;Dbxref=NCBI_GP:HBQ7392279.1;Name=HBQ7392279.1;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=L8R42_004253;product=phenylalanine--tRNA ligase subunit beta;protein_id=HBQ7392279.1;transl_table=11 DAFVNP010000111.1 tpg gene 10369 10668 . + . ID=gene-L8R42_004254;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=L8R42_004254 DAFVNP010000111.1 Protein Homology CDS 10369 10668 . + 0 ID=cds-HBQ7392280.1;Parent=gene-L8R42_004254;Dbxref=NCBI_GP:HBQ7392280.1;Name=HBQ7392280.1;gbkey=CDS;gene=ihfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=L8R42_004254;product=integration host factor subunit alpha;protein_id=HBQ7392280.1;transl_table=11 DAFVNP010000111.1 tpg gene 10871 11851 . + . ID=gene-L8R42_004255;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=L8R42_004255 DAFVNP010000111.1 Protein Homology CDS 10871 11851 . + 0 ID=cds-HBQ7392281.1;Parent=gene-L8R42_004255;Dbxref=NCBI_GP:HBQ7392281.1;Name=HBQ7392281.1;gbkey=CDS;gene=btuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=L8R42_004255;product=vitamin B12 ABC transporter permease BtuC;protein_id=HBQ7392281.1;transl_table=11 DAFVNP010000111.1 tpg gene 11943 12494 . + . ID=gene-L8R42_004256;Name=L8R42_004256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004256 DAFVNP010000111.1 Protein Homology CDS 11943 12494 . + 0 ID=cds-HBQ7392282.1;Parent=gene-L8R42_004256;Dbxref=NCBI_GP:HBQ7392282.1;Name=HBQ7392282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=L8R42_004256;product=glutathione peroxidase;protein_id=HBQ7392282.1;transl_table=11 DAFVNP010000111.1 tpg gene 12494 13243 . + . ID=gene-L8R42_004257;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=L8R42_004257 DAFVNP010000111.1 Protein Homology CDS 12494 13243 . + 0 ID=cds-HBQ7392283.1;Parent=gene-L8R42_004257;Dbxref=NCBI_GP:HBQ7392283.1;Name=HBQ7392283.1;gbkey=CDS;gene=btuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=L8R42_004257;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=HBQ7392283.1;transl_table=11 DAFVNP010000111.1 tpg gene 13320 13784 . + . ID=gene-L8R42_004258;Name=L8R42_004258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004258 DAFVNP010000111.1 Protein Homology CDS 13320 13784 . + 0 ID=cds-HBQ7392284.1;Parent=gene-L8R42_004258;Dbxref=NCBI_GP:HBQ7392284.1;Name=HBQ7392284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=L8R42_004258;product=lipoprotein;protein_id=HBQ7392284.1;transl_table=11 ##sequence-region DAFVNP010000112.1 1 13798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000112.1 tpg region 1 13798 . + . ID=DAFVNP010000112.1:1..13798;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000112.1 tpg gene 83 619 . + . ID=gene-L8R42_004259;Name=L8R42_004259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004259 DAFVNP010000112.1 Protein Homology CDS 83 619 . + 0 ID=cds-HBQ7392285.1;Parent=gene-L8R42_004259;Dbxref=NCBI_GP:HBQ7392285.1;Name=HBQ7392285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=L8R42_004259;product=type 1 fimbrial protein;protein_id=HBQ7392285.1;transl_table=11 DAFVNP010000112.1 tpg gene 681 1442 . + . ID=gene-L8R42_004260;Name=L8R42_004260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004260 DAFVNP010000112.1 Protein Homology CDS 681 1442 . + 0 ID=cds-HBQ7392286.1;Parent=gene-L8R42_004260;Dbxref=NCBI_GP:HBQ7392286.1;Name=HBQ7392286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=L8R42_004260;product=fimbrial chaperone;protein_id=HBQ7392286.1;transl_table=11 DAFVNP010000112.1 tpg gene 1426 3987 . + . ID=gene-L8R42_004261;Name=L8R42_004261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004261 DAFVNP010000112.1 Protein Homology CDS 1426 3987 . + 0 ID=cds-HBQ7392287.1;Parent=gene-L8R42_004261;Dbxref=NCBI_GP:HBQ7392287.1;Name=HBQ7392287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=L8R42_004261;product=fimbrial outer membrane usher protein;protein_id=HBQ7392287.1;transl_table=11 DAFVNP010000112.1 tpg gene 3992 5317 . + . ID=gene-L8R42_004262;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=L8R42_004262 DAFVNP010000112.1 Protein Homology CDS 3992 5317 . + 0 ID=cds-HBQ7392288.1;Parent=gene-L8R42_004262;Dbxref=NCBI_GP:HBQ7392288.1;Name=HBQ7392288.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=L8R42_004262;product=fimbrial usher protein StbD;protein_id=HBQ7392288.1;transl_table=11 DAFVNP010000112.1 tpg gene 5283 6041 . + . ID=gene-L8R42_004263;Name=L8R42_004263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004263 DAFVNP010000112.1 Protein Homology CDS 5283 6041 . + 0 ID=cds-HBQ7392289.1;Parent=gene-L8R42_004263;Dbxref=NCBI_GP:HBQ7392289.1;Name=HBQ7392289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=L8R42_004263;product=fimbrial assembly chaperone;protein_id=HBQ7392289.1;transl_table=11 DAFVNP010000112.1 tpg gene 6089 6487 . - . ID=gene-L8R42_004264;Name=L8R42_004264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004264 DAFVNP010000112.1 Protein Homology CDS 6089 6487 . - 0 ID=cds-HBQ7392290.1;Parent=gene-L8R42_004264;Dbxref=NCBI_GP:HBQ7392290.1;Name=HBQ7392290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=L8R42_004264;product=hypothetical protein;protein_id=HBQ7392290.1;transl_table=11 DAFVNP010000112.1 tpg gene 7178 7450 . + . ID=gene-L8R42_004265;Name=L8R42_004265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004265 DAFVNP010000112.1 Protein Homology CDS 7178 7450 . + 0 ID=cds-HBQ7392291.1;Parent=gene-L8R42_004265;Dbxref=NCBI_GP:HBQ7392291.1;Name=HBQ7392291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=L8R42_004265;product=cytoplasmic protein;protein_id=HBQ7392291.1;transl_table=11 DAFVNP010000112.1 tpg gene 7395 8360 . - . ID=gene-L8R42_004266;Name=L8R42_004266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004266 DAFVNP010000112.1 Protein Homology CDS 7395 8360 . - 0 ID=cds-HBQ7392292.1;Parent=gene-L8R42_004266;Dbxref=NCBI_GP:HBQ7392292.1;Name=HBQ7392292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=L8R42_004266;product=LysR family transcriptional regulator;protein_id=HBQ7392292.1;transl_table=11 DAFVNP010000112.1 tpg gene 8394 9308 . - . ID=gene-L8R42_004267;Name=L8R42_004267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004267 DAFVNP010000112.1 Protein Homology CDS 8394 9308 . - 0 ID=cds-HBQ7392293.1;Parent=gene-L8R42_004267;Dbxref=NCBI_GP:HBQ7392293.1;Name=HBQ7392293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=L8R42_004267;product=alpha/beta hydrolase;protein_id=HBQ7392293.1;transl_table=11 DAFVNP010000112.1 tpg gene 9308 10186 . - . ID=gene-L8R42_004268;Name=L8R42_004268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004268 DAFVNP010000112.1 Protein Homology CDS 9308 10186 . - 0 ID=cds-HBQ7392294.1;Parent=gene-L8R42_004268;Dbxref=NCBI_GP:HBQ7392294.1;Name=HBQ7392294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=L8R42_004268;product=fumarylacetoacetate hydrolase family protein;protein_id=HBQ7392294.1;transl_table=11 DAFVNP010000112.1 tpg gene 10201 10827 . - . ID=gene-L8R42_004269;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=L8R42_004269 DAFVNP010000112.1 Protein Homology CDS 10201 10827 . - 0 ID=cds-HBQ7392295.1;Parent=gene-L8R42_004269;Dbxref=NCBI_GP:HBQ7392295.1;Name=HBQ7392295.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=L8R42_004269;product=3-isopropylmalate dehydratase small subunit;protein_id=HBQ7392295.1;transl_table=11 DAFVNP010000112.1 tpg gene 10829 12250 . - . ID=gene-L8R42_004270;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=L8R42_004270 DAFVNP010000112.1 Protein Homology CDS 10829 12250 . - 0 ID=cds-HBQ7392296.1;Parent=gene-L8R42_004270;Dbxref=NCBI_GP:HBQ7392296.1;Name=HBQ7392296.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=L8R42_004270;product=3-isopropylmalate dehydratase large subunit;protein_id=HBQ7392296.1;transl_table=11 DAFVNP010000112.1 tpg gene 12382 13620 . - . ID=gene-L8R42_004271;Name=L8R42_004271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004271 DAFVNP010000112.1 Protein Homology CDS 12382 13620 . - 0 ID=cds-HBQ7392297.1;Parent=gene-L8R42_004271;Dbxref=NCBI_GP:HBQ7392297.1;Name=HBQ7392297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=L8R42_004271;product=MFS transporter;protein_id=HBQ7392297.1;transl_table=11 ##sequence-region DAFVNP010000113.1 1 12906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000113.1 tpg region 1 12906 . + . ID=DAFVNP010000113.1:1..12906;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000113.1 tpg pseudogene 1 234 . - . ID=gene-L8R42_004272;Name=L8R42_004272;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004272;pseudo=true DAFVNP010000113.1 Protein Homology CDS 1 234 . - 0 ID=cds-L8R42_004272;Parent=gene-L8R42_004272;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=L8R42_004272;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000113.1 tpg gene 223 630 . + . ID=gene-L8R42_004273;Name=L8R42_004273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004273 DAFVNP010000113.1 Protein Homology CDS 223 630 . + 0 ID=cds-HBQ7392298.1;Parent=gene-L8R42_004273;Dbxref=NCBI_GP:HBQ7392298.1;Name=HBQ7392298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501368.1;locus_tag=L8R42_004273;product=cysteine hydrolase;protein_id=HBQ7392298.1;transl_table=11 DAFVNP010000113.1 tpg gene 768 1652 . + . ID=gene-L8R42_004274;Name=L8R42_004274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004274 DAFVNP010000113.1 Protein Homology CDS 768 1652 . + 0 ID=cds-HBQ7392299.1;Parent=gene-L8R42_004274;Dbxref=NCBI_GP:HBQ7392299.1;Name=HBQ7392299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058717.1;locus_tag=L8R42_004274;product=EamA family transporter;protein_id=HBQ7392299.1;transl_table=11 DAFVNP010000113.1 tpg gene 1684 2883 . - . ID=gene-L8R42_004275;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=protein_coding;locus_tag=L8R42_004275 DAFVNP010000113.1 Protein Homology CDS 1684 2883 . - 0 ID=cds-HBQ7392300.1;Parent=gene-L8R42_004275;Dbxref=NCBI_GP:HBQ7392300.1;Name=HBQ7392300.1;gbkey=CDS;gene=tet(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804064.1;locus_tag=L8R42_004275;product=tetracycline efflux MFS transporter Tet(A);protein_id=HBQ7392300.1;transl_table=11 DAFVNP010000113.1 tpg gene 2989 3639 . + . ID=gene-L8R42_004276;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=protein_coding;locus_tag=L8R42_004276 DAFVNP010000113.1 Protein Homology CDS 2989 3639 . + 0 ID=cds-HBQ7392301.1;Parent=gene-L8R42_004276;Dbxref=NCBI_GP:HBQ7392301.1;Name=HBQ7392301.1;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=L8R42_004276;product=tetracycline resistance transcriptional repressor TetR(A);protein_id=HBQ7392301.1;transl_table=11 DAFVNP010000113.1 tpg gene 3845 4279 . - . ID=gene-L8R42_004277;Name=merR;gbkey=Gene;gene=merR;gene_biotype=protein_coding;locus_tag=L8R42_004277 DAFVNP010000113.1 Protein Homology CDS 3845 4279 . - 0 ID=cds-HBQ7392302.1;Parent=gene-L8R42_004277;Dbxref=NCBI_GP:HBQ7392302.1;Name=HBQ7392302.1;gbkey=CDS;gene=merR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229638.1;locus_tag=L8R42_004277;product=Hg(II)-responsive transcriptional regulator;protein_id=HBQ7392302.1;transl_table=11 DAFVNP010000113.1 tpg gene 4351 4701 . + . ID=gene-L8R42_004278;Name=L8R42_004278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004278 DAFVNP010000113.1 Protein Homology CDS 4351 4701 . + 0 ID=cds-HBQ7392303.1;Parent=gene-L8R42_004278;Dbxref=NCBI_GP:HBQ7392303.1;Name=HBQ7392303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229639.1;locus_tag=L8R42_004278;product=mercuric transport protein MerT;protein_id=HBQ7392303.1;transl_table=11 DAFVNP010000113.1 tpg gene 4715 4990 . + . ID=gene-L8R42_004279;Name=merP;gbkey=Gene;gene=merP;gene_biotype=protein_coding;locus_tag=L8R42_004279 DAFVNP010000113.1 Protein Homology CDS 4715 4990 . + 0 ID=cds-HBQ7392304.1;Parent=gene-L8R42_004279;Dbxref=NCBI_GP:HBQ7392304.1;Name=HBQ7392304.1;gbkey=CDS;gene=merP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229640.1;locus_tag=L8R42_004279;product=mercury resistance system periplasmic binding protein MerP;protein_id=HBQ7392304.1;transl_table=11 DAFVNP010000113.1 tpg gene 5026 5448 . + . ID=gene-L8R42_004280;Name=merC;gbkey=Gene;gene=merC;gene_biotype=protein_coding;locus_tag=L8R42_004280 DAFVNP010000113.1 Protein Homology CDS 5026 5448 . + 0 ID=cds-HBQ7392305.1;Parent=gene-L8R42_004280;Dbxref=NCBI_GP:HBQ7392305.1;Name=HBQ7392305.1;gbkey=CDS;gene=merC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239395.1;locus_tag=L8R42_004280;product=organomercurial transporter MerC;protein_id=HBQ7392305.1;transl_table=11 DAFVNP010000113.1 tpg gene 5500 7182 . + . ID=gene-L8R42_004281;Name=L8R42_004281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004281 DAFVNP010000113.1 Protein Homology CDS 5500 7182 . + 0 ID=cds-HBQ7392306.1;Parent=gene-L8R42_004281;Dbxref=NCBI_GP:HBQ7392306.1;Name=HBQ7392306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240396.1;locus_tag=L8R42_004281;product=mercury(II) reductase;protein_id=HBQ7392306.1;transl_table=11 DAFVNP010000113.1 tpg gene 7200 7565 . + . ID=gene-L8R42_004282;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=L8R42_004282 DAFVNP010000113.1 Protein Homology CDS 7200 7565 . + 0 ID=cds-HBQ7392307.1;Parent=gene-L8R42_004282;Dbxref=NCBI_GP:HBQ7392307.1;Name=HBQ7392307.1;gbkey=CDS;gene=merD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1;locus_tag=L8R42_004282;product=mercury resistance co-regulator MerD;protein_id=HBQ7392307.1;transl_table=11 DAFVNP010000113.1 tpg gene 7562 7798 . + . ID=gene-L8R42_004283;Name=merE;gbkey=Gene;gene=merE;gene_biotype=protein_coding;locus_tag=L8R42_004283 DAFVNP010000113.1 Protein Homology CDS 7562 7798 . + 0 ID=cds-HBQ7392308.1;Parent=gene-L8R42_004283;Dbxref=NCBI_GP:HBQ7392308.1;Name=HBQ7392308.1;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003132004.1;locus_tag=L8R42_004283;product=broad-spectrum mercury transporter MerE;protein_id=HBQ7392308.1;transl_table=11 DAFVNP010000113.1 tpg pseudogene 7834 8442 . + . ID=gene-L8R42_004284;Name=L8R42_004284;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004284;pseudo=true DAFVNP010000113.1 Protein Homology CDS 7834 8442 . + 0 ID=cds-L8R42_004284;Parent=gene-L8R42_004284;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1;locus_tag=L8R42_004284;product=EAL domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000113.1 tpg gene 8804 9568 . - . ID=gene-L8R42_004285;Name=L8R42_004285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004285 DAFVNP010000113.1 Protein Homology CDS 8804 9568 . - 0 ID=cds-HBQ7392309.1;Parent=gene-L8R42_004285;Dbxref=NCBI_GP:HBQ7392309.1;Name=HBQ7392309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1;locus_tag=L8R42_004285;product=IS6-like element IS6100 family transposase;protein_id=HBQ7392309.1;transl_table=11 DAFVNP010000113.1 tpg gene 9608 9814 . - . ID=gene-L8R42_004286;Name=L8R42_004286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004286 DAFVNP010000113.1 Protein Homology CDS 9608 9814 . - 0 ID=cds-HBQ7392310.1;Parent=gene-L8R42_004286;Dbxref=NCBI_GP:HBQ7392310.1;Name=HBQ7392310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376617.1;locus_tag=L8R42_004286;product=hypothetical protein;protein_id=HBQ7392310.1;transl_table=11 DAFVNP010000113.1 tpg gene 9942 10781 . - . ID=gene-L8R42_004287;Name=sul1;gbkey=Gene;gene=sul1;gene_biotype=protein_coding;locus_tag=L8R42_004287 DAFVNP010000113.1 Protein Homology CDS 9942 10781 . - 0 ID=cds-HBQ7392311.1;Parent=gene-L8R42_004287;Dbxref=NCBI_GP:HBQ7392311.1;Name=HBQ7392311.1;gbkey=CDS;gene=sul1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1;locus_tag=L8R42_004287;product=sulfonamide-resistant dihydropteroate synthase Sul1;protein_id=HBQ7392311.1;transl_table=11 DAFVNP010000113.1 tpg gene 10775 11122 . - . ID=gene-L8R42_004288;Name=L8R42_004288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004288 DAFVNP010000113.1 Protein Homology CDS 10775 11122 . - 0 ID=cds-HBQ7392312.1;Parent=gene-L8R42_004288;Dbxref=NCBI_GP:HBQ7392312.1;Name=HBQ7392312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1;locus_tag=L8R42_004288;product=quaternary ammonium compound efflux SMR transporter QacE delta 1;protein_id=HBQ7392312.1;transl_table=11 DAFVNP010000113.1 tpg gene 11286 12083 . - . ID=gene-L8R42_004289;Name=L8R42_004289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004289 DAFVNP010000113.1 Protein Homology CDS 11286 12083 . - 0 ID=cds-HBQ7392313.1;Parent=gene-L8R42_004289;Dbxref=NCBI_GP:HBQ7392313.1;Name=HBQ7392313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001436322.1;locus_tag=L8R42_004289;product=ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA7;protein_id=HBQ7392313.1;transl_table=11 DAFVNP010000113.1 tpg gene 12159 12635 . - . ID=gene-L8R42_004290;Name=aac(3)-Id;gbkey=Gene;gene=aac(3)-Id;gene_biotype=protein_coding;locus_tag=L8R42_004290 DAFVNP010000113.1 Protein Homology CDS 12159 12635 . - 0 ID=cds-HBQ7392314.1;Parent=gene-L8R42_004290;Dbxref=NCBI_GP:HBQ7392314.1;Name=HBQ7392314.1;gbkey=CDS;gene=aac(3)-Id;inference=COORDINATES: similar to AA sequence:RefSeq:WP_038404949.1;locus_tag=L8R42_004290;product=aminoglycoside N-acetyltransferase AAC(3)-Id;protein_id=HBQ7392314.1;transl_table=11 DAFVNP010000113.1 tpg gene 12793 12906 . + . ID=gene-L8R42_004291;Name=L8R42_004291;end_range=12906,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004291;partial=true DAFVNP010000113.1 Protein Homology CDS 12793 12906 . + 0 ID=cds-HBQ7392315.1;Parent=gene-L8R42_004291;Dbxref=NCBI_GP:HBQ7392315.1;Name=HBQ7392315.1;end_range=12906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221021.1;locus_tag=L8R42_004291;partial=true;product=integrase;protein_id=HBQ7392315.1;transl_table=11 ##sequence-region DAFVNP010000114.1 1 12526 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000114.1 tpg region 1 12526 . + . ID=DAFVNP010000114.1:1..12526;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000114.1 tpg gene 1 859 . + . ID=gene-L8R42_004292;Name=L8R42_004292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004292;partial=true;start_range=.,1 DAFVNP010000114.1 Protein Homology CDS 1 859 . + 1 ID=cds-HBQ7392316.1;Parent=gene-L8R42_004292;Dbxref=NCBI_GP:HBQ7392316.1;Name=HBQ7392316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=L8R42_004292;partial=true;product=transposase;protein_id=HBQ7392316.1;start_range=.,1;transl_table=11 DAFVNP010000114.1 tpg gene 969 1319 . + . ID=gene-L8R42_004293;Name=L8R42_004293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004293 DAFVNP010000114.1 Protein Homology CDS 969 1319 . + 0 ID=cds-HBQ7392317.1;Parent=gene-L8R42_004293;Dbxref=NCBI_GP:HBQ7392317.1;Name=HBQ7392317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001447898.1;locus_tag=L8R42_004293;product=hypothetical protein;protein_id=HBQ7392317.1;transl_table=11 DAFVNP010000114.1 tpg gene 1696 2013 . + . ID=gene-L8R42_004294;Name=L8R42_004294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004294 DAFVNP010000114.1 Protein Homology CDS 1696 2013 . + 0 ID=cds-HBQ7392318.1;Parent=gene-L8R42_004294;Dbxref=NCBI_GP:HBQ7392318.1;Name=HBQ7392318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900745.1;locus_tag=L8R42_004294;product=hypothetical protein;protein_id=HBQ7392318.1;transl_table=11 DAFVNP010000114.1 tpg gene 2064 2471 . - . ID=gene-L8R42_004295;Name=L8R42_004295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004295 DAFVNP010000114.1 Protein Homology CDS 2064 2471 . - 0 ID=cds-HBQ7392319.1;Parent=gene-L8R42_004295;Dbxref=NCBI_GP:HBQ7392319.1;Name=HBQ7392319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074418.1;locus_tag=L8R42_004295;product=hypothetical protein;protein_id=HBQ7392319.1;transl_table=11 DAFVNP010000114.1 tpg gene 2501 2962 . - . ID=gene-L8R42_004296;Name=L8R42_004296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004296 DAFVNP010000114.1 GeneMarkS-2+ CDS 2501 2962 . - 0 ID=cds-HBQ7392320.1;Parent=gene-L8R42_004296;Dbxref=NCBI_GP:HBQ7392320.1;Name=HBQ7392320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_004296;product=hypothetical protein;protein_id=HBQ7392320.1;transl_table=11 DAFVNP010000114.1 tpg gene 3299 3529 . - . ID=gene-L8R42_004297;Name=L8R42_004297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004297 DAFVNP010000114.1 Protein Homology CDS 3299 3529 . - 0 ID=cds-HBQ7392321.1;Parent=gene-L8R42_004297;Dbxref=NCBI_GP:HBQ7392321.1;Name=HBQ7392321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572393.1;locus_tag=L8R42_004297;product=hypothetical protein;protein_id=HBQ7392321.1;transl_table=11 DAFVNP010000114.1 tpg gene 4191 4424 . - . ID=gene-L8R42_004298;Name=L8R42_004298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004298 DAFVNP010000114.1 Protein Homology CDS 4191 4424 . - 0 ID=cds-HBQ7392322.1;Parent=gene-L8R42_004298;Dbxref=NCBI_GP:HBQ7392322.1;Name=HBQ7392322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001371948.1;locus_tag=L8R42_004298;product=hypothetical protein;protein_id=HBQ7392322.1;transl_table=11 DAFVNP010000114.1 tpg gene 4646 5542 . - . ID=gene-L8R42_004299;Name=L8R42_004299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004299 DAFVNP010000114.1 Protein Homology CDS 4646 5542 . - 0 ID=cds-HBQ7392323.1;Parent=gene-L8R42_004299;Dbxref=NCBI_GP:HBQ7392323.1;Name=HBQ7392323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000975182.1;locus_tag=L8R42_004299;product=hypothetical protein;protein_id=HBQ7392323.1;transl_table=11 DAFVNP010000114.1 tpg gene 5545 6060 . - . ID=gene-L8R42_004300;Name=L8R42_004300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004300 DAFVNP010000114.1 Protein Homology CDS 5545 6060 . - 0 ID=cds-HBQ7392324.1;Parent=gene-L8R42_004300;Dbxref=NCBI_GP:HBQ7392324.1;Name=HBQ7392324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000464825.1;locus_tag=L8R42_004300;product=thermonuclease family protein;protein_id=HBQ7392324.1;transl_table=11 DAFVNP010000114.1 tpg gene 6275 7702 . + . ID=gene-L8R42_004301;Name=L8R42_004301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004301 DAFVNP010000114.1 Protein Homology CDS 6275 7702 . + 0 ID=cds-HBQ7392325.1;Parent=gene-L8R42_004301;Dbxref=NCBI_GP:HBQ7392325.1;Name=HBQ7392325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833380.1;locus_tag=L8R42_004301;product=DNA cytosine methyltransferase;protein_id=HBQ7392325.1;transl_table=11 DAFVNP010000114.1 tpg gene 7763 7930 . + . ID=gene-L8R42_004302;Name=L8R42_004302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004302 DAFVNP010000114.1 Protein Homology CDS 7763 7930 . + 0 ID=cds-HBQ7392326.1;Parent=gene-L8R42_004302;Dbxref=NCBI_GP:HBQ7392326.1;Name=HBQ7392326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220758.1;locus_tag=L8R42_004302;product=hypothetical protein;protein_id=HBQ7392326.1;transl_table=11 DAFVNP010000114.1 tpg gene 7953 9272 . + . ID=gene-L8R42_004303;Name=L8R42_004303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004303 DAFVNP010000114.1 Protein Homology CDS 7953 9272 . + 0 ID=cds-HBQ7392327.1;Parent=gene-L8R42_004303;Dbxref=NCBI_GP:HBQ7392327.1;Name=HBQ7392327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248834.1;locus_tag=L8R42_004303;product=DUF1173 family protein;protein_id=HBQ7392327.1;transl_table=11 DAFVNP010000114.1 tpg gene 9552 10757 . - . ID=gene-L8R42_004304;Name=L8R42_004304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004304 DAFVNP010000114.1 Protein Homology CDS 9552 10757 . - 0 ID=cds-HBQ7392328.1;Parent=gene-L8R42_004304;Dbxref=NCBI_GP:HBQ7392328.1;Name=HBQ7392328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572381.1;locus_tag=L8R42_004304;product=ATP/GTP-binding protein;protein_id=HBQ7392328.1;transl_table=11 DAFVNP010000114.1 tpg gene 10754 11572 . - . ID=gene-L8R42_004305;Name=L8R42_004305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004305 DAFVNP010000114.1 Protein Homology CDS 10754 11572 . - 0 ID=cds-HBQ7392329.1;Parent=gene-L8R42_004305;Dbxref=NCBI_GP:HBQ7392329.1;Name=HBQ7392329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193207.1;locus_tag=L8R42_004305;product=DUF4942 domain-containing protein;protein_id=HBQ7392329.1;transl_table=11 DAFVNP010000114.1 tpg gene 12047 12526 . - . ID=gene-L8R42_004306;Name=L8R42_004306;end_range=12526,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004306;partial=true DAFVNP010000114.1 Protein Homology CDS 12047 12526 . - 0 ID=cds-HBQ7392330.1;Parent=gene-L8R42_004306;Dbxref=NCBI_GP:HBQ7392330.1;Name=HBQ7392330.1;end_range=12526,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611787.1;locus_tag=L8R42_004306;partial=true;product=Tn3 family transposase;protein_id=HBQ7392330.1;transl_table=11 ##sequence-region DAFVNP010000115.1 1 12436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000115.1 tpg region 1 12436 . + . ID=DAFVNP010000115.1:1..12436;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000115.1 tpg gene 1 523 . - . ID=gene-L8R42_004307;Name=L8R42_004307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004307;partial=true;start_range=.,1 DAFVNP010000115.1 Protein Homology CDS 1 523 . - 0 ID=cds-HBQ7392331.1;Parent=gene-L8R42_004307;Dbxref=NCBI_GP:HBQ7392331.1;Name=HBQ7392331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=L8R42_004307;partial=true;product=MFS transporter;protein_id=HBQ7392331.1;start_range=.,1;transl_table=11 DAFVNP010000115.1 tpg gene 639 1532 . - . ID=gene-L8R42_004308;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=L8R42_004308 DAFVNP010000115.1 Protein Homology CDS 639 1532 . - 0 ID=cds-HBQ7392332.1;Parent=gene-L8R42_004308;Dbxref=NCBI_GP:HBQ7392332.1;Name=HBQ7392332.1;gbkey=CDS;gene=nanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=L8R42_004308;product=N-acetylneuraminate lyase;protein_id=HBQ7392332.1;transl_table=11 DAFVNP010000115.1 tpg gene 1667 2458 . - . ID=gene-L8R42_004309;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=L8R42_004309 DAFVNP010000115.1 Protein Homology CDS 1667 2458 . - 0 ID=cds-HBQ7392333.1;Parent=gene-L8R42_004309;Dbxref=NCBI_GP:HBQ7392333.1;Name=HBQ7392333.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=L8R42_004309;product=transcriptional regulator NanR;protein_id=HBQ7392333.1;transl_table=11 DAFVNP010000115.1 tpg gene 2567 3067 . - . ID=gene-L8R42_004310;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=L8R42_004310 DAFVNP010000115.1 Protein Homology CDS 2567 3067 . - 0 ID=cds-HBQ7392334.1;Parent=gene-L8R42_004310;Dbxref=NCBI_GP:HBQ7392334.1;Name=HBQ7392334.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=L8R42_004310;product=ClpXP protease specificity-enhancing factor;protein_id=HBQ7392334.1;transl_table=11 DAFVNP010000115.1 tpg gene 3073 3711 . - . ID=gene-L8R42_004311;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=L8R42_004311 DAFVNP010000115.1 Protein Homology CDS 3073 3711 . - 0 ID=cds-HBQ7392335.1;Parent=gene-L8R42_004311;Dbxref=NCBI_GP:HBQ7392335.1;Name=HBQ7392335.1;gbkey=CDS;gene=sspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=L8R42_004311;product=stringent starvation protein A;protein_id=HBQ7392335.1;transl_table=11 DAFVNP010000115.1 tpg gene 3974 4726 . - . ID=gene-L8R42_004312;Name=L8R42_004312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004312 DAFVNP010000115.1 Protein Homology CDS 3974 4726 . - 0 ID=cds-HBQ7392336.1;Parent=gene-L8R42_004312;Dbxref=NCBI_GP:HBQ7392336.1;Name=HBQ7392336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=L8R42_004312;product=DUF695 domain-containing protein;protein_id=HBQ7392336.1;transl_table=11 DAFVNP010000115.1 tpg gene 4926 5318 . - . ID=gene-L8R42_004313;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=L8R42_004313 DAFVNP010000115.1 Protein Homology CDS 4926 5318 . - 0 ID=cds-HBQ7392337.1;Parent=gene-L8R42_004313;Dbxref=NCBI_GP:HBQ7392337.1;Name=HBQ7392337.1;gbkey=CDS;gene=rpsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=L8R42_004313;product=30S ribosomal protein S9;protein_id=HBQ7392337.1;transl_table=11 DAFVNP010000115.1 tpg gene 5334 5762 . - . ID=gene-L8R42_004314;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=L8R42_004314 DAFVNP010000115.1 Protein Homology CDS 5334 5762 . - 0 ID=cds-HBQ7392338.1;Parent=gene-L8R42_004314;Dbxref=NCBI_GP:HBQ7392338.1;Name=HBQ7392338.1;gbkey=CDS;gene=rplM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=L8R42_004314;product=50S ribosomal protein L13;protein_id=HBQ7392338.1;transl_table=11 DAFVNP010000115.1 tpg gene 6065 7189 . - . ID=gene-L8R42_004315;Name=L8R42_004315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004315 DAFVNP010000115.1 Protein Homology CDS 6065 7189 . - 0 ID=cds-HBQ7392339.1;Parent=gene-L8R42_004315;Dbxref=NCBI_GP:HBQ7392339.1;Name=HBQ7392339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=L8R42_004315;product=AFG1 family ATPase;protein_id=HBQ7392339.1;transl_table=11 DAFVNP010000115.1 tpg gene 7382 7780 . + . ID=gene-L8R42_004316;Name=L8R42_004316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004316 DAFVNP010000115.1 Protein Homology CDS 7382 7780 . + 0 ID=cds-HBQ7392340.1;Parent=gene-L8R42_004316;Dbxref=NCBI_GP:HBQ7392340.1;Name=HBQ7392340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=L8R42_004316;product=DUF1043 family protein;protein_id=HBQ7392340.1;transl_table=11 DAFVNP010000115.1 tpg gene 7937 9304 . + . ID=gene-L8R42_004317;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=L8R42_004317 DAFVNP010000115.1 Protein Homology CDS 7937 9304 . + 0 ID=cds-HBQ7392341.1;Parent=gene-L8R42_004317;Dbxref=NCBI_GP:HBQ7392341.1;Name=HBQ7392341.1;gbkey=CDS;gene=degQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=L8R42_004317;product=serine endoprotease DegQ;protein_id=HBQ7392341.1;transl_table=11 DAFVNP010000115.1 tpg gene 9397 10467 . + . ID=gene-L8R42_004318;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=L8R42_004318 DAFVNP010000115.1 Protein Homology CDS 9397 10467 . + 0 ID=cds-HBQ7392342.1;Parent=gene-L8R42_004318;Dbxref=NCBI_GP:HBQ7392342.1;Name=HBQ7392342.1;gbkey=CDS;gene=degS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=L8R42_004318;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=HBQ7392342.1;transl_table=11 DAFVNP010000115.1 tpg gene 10501 11232 . - . ID=gene-L8R42_004319;Name=L8R42_004319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004319 DAFVNP010000115.1 Protein Homology CDS 10501 11232 . - 0 ID=cds-HBQ7392343.1;Parent=gene-L8R42_004319;Dbxref=NCBI_GP:HBQ7392343.1;Name=HBQ7392343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=L8R42_004319;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=HBQ7392343.1;transl_table=11 DAFVNP010000115.1 tpg gene 11252 12436 . - . ID=gene-L8R42_004320;Name=L8R42_004320;end_range=12436,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004320;partial=true DAFVNP010000115.1 Protein Homology CDS 11252 12436 . - 0 ID=cds-HBQ7392344.1;Parent=gene-L8R42_004320;Dbxref=NCBI_GP:HBQ7392344.1;Name=HBQ7392344.1;end_range=12436,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=L8R42_004320;partial=true;product=oxalacetate decarboxylase subunit beta;protein_id=HBQ7392344.1;transl_table=11 ##sequence-region DAFVNP010000116.1 1 12334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000116.1 tpg region 1 12334 . + . ID=DAFVNP010000116.1:1..12334;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000116.1 tpg gene 1 1245 . - . ID=gene-L8R42_004321;Name=L8R42_004321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004321;partial=true;start_range=.,1 DAFVNP010000116.1 Protein Homology CDS 1 1245 . - 0 ID=cds-HBQ7392345.1;Parent=gene-L8R42_004321;Dbxref=NCBI_GP:HBQ7392345.1;Name=HBQ7392345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=L8R42_004321;partial=true;product=cation:dicarboxylase symporter family transporter;protein_id=HBQ7392345.1;start_range=.,1;transl_table=11 DAFVNP010000116.1 tpg gene 1672 2040 . + . ID=gene-L8R42_004322;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=L8R42_004322 DAFVNP010000116.1 Protein Homology CDS 1672 2040 . + 0 ID=cds-HBQ7392346.1;Parent=gene-L8R42_004322;Dbxref=NCBI_GP:HBQ7392346.1;Name=HBQ7392346.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=L8R42_004322;product=Fe-S cluster assembly scaffold SufA;protein_id=HBQ7392346.1;transl_table=11 DAFVNP010000116.1 tpg gene 2049 3536 . + . ID=gene-L8R42_004323;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=L8R42_004323 DAFVNP010000116.1 Protein Homology CDS 2049 3536 . + 0 ID=cds-HBQ7392347.1;Parent=gene-L8R42_004323;Dbxref=NCBI_GP:HBQ7392347.1;Name=HBQ7392347.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=L8R42_004323;product=Fe-S cluster assembly protein SufB;protein_id=HBQ7392347.1;transl_table=11 DAFVNP010000116.1 tpg gene 3553 4299 . + . ID=gene-L8R42_004324;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=L8R42_004324 DAFVNP010000116.1 Protein Homology CDS 3553 4299 . + 0 ID=cds-HBQ7392348.1;Parent=gene-L8R42_004324;Dbxref=NCBI_GP:HBQ7392348.1;Name=HBQ7392348.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=L8R42_004324;product=Fe-S cluster assembly ATPase SufC;protein_id=HBQ7392348.1;transl_table=11 DAFVNP010000116.1 tpg gene 4274 5545 . + . ID=gene-L8R42_004325;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=L8R42_004325 DAFVNP010000116.1 Protein Homology CDS 4274 5545 . + 0 ID=cds-HBQ7392349.1;Parent=gene-L8R42_004325;Dbxref=NCBI_GP:HBQ7392349.1;Name=HBQ7392349.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=L8R42_004325;product=Fe-S cluster assembly protein SufD;protein_id=HBQ7392349.1;transl_table=11 DAFVNP010000116.1 tpg gene 5542 6762 . + . ID=gene-L8R42_004326;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=L8R42_004326 DAFVNP010000116.1 Protein Homology CDS 5542 6762 . + 0 ID=cds-HBQ7392350.1;Parent=gene-L8R42_004326;Dbxref=NCBI_GP:HBQ7392350.1;Name=HBQ7392350.1;gbkey=CDS;gene=sufS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=L8R42_004326;product=cysteine desulfurase SufS;protein_id=HBQ7392350.1;transl_table=11 DAFVNP010000116.1 tpg gene 6775 7191 . + . ID=gene-L8R42_004327;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=L8R42_004327 DAFVNP010000116.1 Protein Homology CDS 6775 7191 . + 0 ID=cds-HBQ7392351.1;Parent=gene-L8R42_004327;Dbxref=NCBI_GP:HBQ7392351.1;Name=HBQ7392351.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=L8R42_004327;product=cysteine desulfuration protein SufE;protein_id=HBQ7392351.1;transl_table=11 DAFVNP010000116.1 tpg gene 7346 8347 . + . ID=gene-L8R42_004328;Name=L8R42_004328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004328 DAFVNP010000116.1 Protein Homology CDS 7346 8347 . + 0 ID=cds-HBQ7392352.1;Parent=gene-L8R42_004328;Dbxref=NCBI_GP:HBQ7392352.1;Name=HBQ7392352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=L8R42_004328;product=L%2CD-transpeptidase family protein;protein_id=HBQ7392352.1;transl_table=11 DAFVNP010000116.1 tpg gene 8414 8653 . - . ID=gene-L8R42_004329;Name=L8R42_004329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004329 DAFVNP010000116.1 Protein Homology CDS 8414 8653 . - 0 ID=cds-HBQ7392353.1;Parent=gene-L8R42_004329;Dbxref=NCBI_GP:HBQ7392353.1;Name=HBQ7392353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=L8R42_004329;product=major outer membrane lipoprotein;protein_id=HBQ7392353.1;transl_table=11 DAFVNP010000116.1 tpg gene 8736 8972 . - . ID=gene-L8R42_004330;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=L8R42_004330 DAFVNP010000116.1 Protein Homology CDS 8736 8972 . - 0 ID=cds-HBQ7392354.1;Parent=gene-L8R42_004330;Dbxref=NCBI_GP:HBQ7392354.1;Name=HBQ7392354.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=L8R42_004330;product=murein lipoprotein Lpp;protein_id=HBQ7392354.1;transl_table=11 DAFVNP010000116.1 tpg gene 9283 10695 . - . ID=gene-L8R42_004331;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=L8R42_004331 DAFVNP010000116.1 Protein Homology CDS 9283 10695 . - 0 ID=cds-HBQ7392355.1;Parent=gene-L8R42_004331;Dbxref=NCBI_GP:HBQ7392355.1;Name=HBQ7392355.1;gbkey=CDS;gene=pykF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=L8R42_004331;product=pyruvate kinase PykF;protein_id=HBQ7392355.1;transl_table=11 DAFVNP010000116.1 tpg gene 11097 12334 . - . ID=gene-L8R42_004332;Name=L8R42_004332;end_range=12334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004332;partial=true DAFVNP010000116.1 Protein Homology CDS 11097 12334 . - 2 ID=cds-HBQ7392356.1;Parent=gene-L8R42_004332;Dbxref=NCBI_GP:HBQ7392356.1;Name=HBQ7392356.1;end_range=12334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=L8R42_004332;partial=true;product=APC family permease;protein_id=HBQ7392356.1;transl_table=11 ##sequence-region DAFVNP010000117.1 1 12023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000117.1 tpg region 1 12023 . + . ID=DAFVNP010000117.1:1..12023;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000117.1 tpg gene 148 1164 . + . ID=gene-L8R42_004333;Name=L8R42_004333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004333 DAFVNP010000117.1 Protein Homology CDS 148 1164 . + 0 ID=cds-HBQ7392357.1;Parent=gene-L8R42_004333;Dbxref=NCBI_GP:HBQ7392357.1;Name=HBQ7392357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1;locus_tag=L8R42_004333;product=IS110 family transposase;protein_id=HBQ7392357.1;transl_table=11 DAFVNP010000117.1 tpg pseudogene 1390 1506 . - . ID=gene-L8R42_004334;Name=L8R42_004334;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004334;pseudo=true DAFVNP010000117.1 Protein Homology CDS 1390 1506 . - 0 ID=cds-L8R42_004334;Parent=gene-L8R42_004334;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=L8R42_004334;product=transposase;pseudo=true;transl_table=11 DAFVNP010000117.1 tpg gene 1748 3325 . - . ID=gene-L8R42_004335;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=L8R42_004335 DAFVNP010000117.1 Protein Homology CDS 1748 3325 . - 0 ID=cds-HBQ7392358.1;Parent=gene-L8R42_004335;Dbxref=NCBI_GP:HBQ7392358.1;Name=HBQ7392358.1;gbkey=CDS;gene=guaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=L8R42_004335;product=glutamine-hydrolyzing GMP synthase;protein_id=HBQ7392358.1;transl_table=11 DAFVNP010000117.1 tpg gene 3394 4860 . - . ID=gene-L8R42_004336;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=L8R42_004336 DAFVNP010000117.1 Protein Homology CDS 3394 4860 . - 0 ID=cds-HBQ7392359.1;Parent=gene-L8R42_004336;Dbxref=NCBI_GP:HBQ7392359.1;Name=HBQ7392359.1;gbkey=CDS;gene=guaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=L8R42_004336;product=IMP dehydrogenase;protein_id=HBQ7392359.1;transl_table=11 DAFVNP010000117.1 tpg gene 5021 6370 . + . ID=gene-L8R42_004337;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=L8R42_004337 DAFVNP010000117.1 Protein Homology CDS 5021 6370 . + 0 ID=cds-HBQ7392360.1;Parent=gene-L8R42_004337;Dbxref=NCBI_GP:HBQ7392360.1;Name=HBQ7392360.1;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=L8R42_004337;product=exodeoxyribonuclease VII large subunit;protein_id=HBQ7392360.1;transl_table=11 DAFVNP010000117.1 tpg gene 6532 11910 . - . ID=gene-L8R42_004338;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=L8R42_004338 DAFVNP010000117.1 Protein Homology CDS 6532 11910 . - 0 ID=cds-HBQ7392361.1;Parent=gene-L8R42_004338;Dbxref=NCBI_GP:HBQ7392361.1;Name=HBQ7392361.1;gbkey=CDS;gene=shdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=L8R42_004338;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=HBQ7392361.1;transl_table=11 ##sequence-region DAFVNP010000118.1 1 11354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000118.1 tpg region 1 11354 . + . ID=DAFVNP010000118.1:1..11354;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000118.1 tpg gene 398 1030 . + . ID=gene-L8R42_004339;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=L8R42_004339 DAFVNP010000118.1 Protein Homology CDS 398 1030 . + 0 ID=cds-HBQ7392362.1;Parent=gene-L8R42_004339;Dbxref=NCBI_GP:HBQ7392362.1;Name=HBQ7392362.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=L8R42_004339;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=HBQ7392362.1;transl_table=11 DAFVNP010000118.1 tpg gene 1027 2415 . + . ID=gene-L8R42_004340;Name=L8R42_004340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004340 DAFVNP010000118.1 Protein Homology CDS 1027 2415 . + 0 ID=cds-HBQ7392363.1;Parent=gene-L8R42_004340;Dbxref=NCBI_GP:HBQ7392363.1;Name=HBQ7392363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=L8R42_004340;product=MotA/TolQ/ExbB proton channel family protein;protein_id=HBQ7392363.1;transl_table=11 DAFVNP010000118.1 tpg gene 2405 3724 . + . ID=gene-L8R42_004341;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=L8R42_004341 DAFVNP010000118.1 Protein Homology CDS 2405 3724 . + 0 ID=cds-HBQ7392364.1;Parent=gene-L8R42_004341;Dbxref=NCBI_GP:HBQ7392364.1;Name=HBQ7392364.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=L8R42_004341;product=SPI-4 type I secretion system protein SiiC;protein_id=HBQ7392364.1;transl_table=11 DAFVNP010000118.1 tpg gene 3721 4998 . + . ID=gene-L8R42_004342;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=L8R42_004342 DAFVNP010000118.1 Protein Homology CDS 3721 4998 . + 0 ID=cds-HBQ7392365.1;Parent=gene-L8R42_004342;Dbxref=NCBI_GP:HBQ7392365.1;Name=HBQ7392365.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=L8R42_004342;product=SPI-4 type I secretion system protein SiiD;protein_id=HBQ7392365.1;transl_table=11 DAFVNP010000118.1 tpg gene 5015 11354 . + . ID=gene-L8R42_004343;Name=siiE;end_range=11354,.;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=L8R42_004343;partial=true DAFVNP010000118.1 Protein Homology CDS 5015 11354 . + 0 ID=cds-HBQ7392366.1;Parent=gene-L8R42_004343;Dbxref=NCBI_GP:HBQ7392366.1;Name=HBQ7392366.1;end_range=11354,.;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=L8R42_004343;partial=true;product=non-fimbrial adhesin SiiE;protein_id=HBQ7392366.1;transl_table=11 ##sequence-region DAFVNP010000119.1 1 11000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000119.1 tpg region 1 11000 . + . ID=DAFVNP010000119.1:1..11000;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000119.1 tpg gene 47 769 . + . ID=gene-L8R42_004344;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=L8R42_004344 DAFVNP010000119.1 Protein Homology CDS 47 769 . + 0 ID=cds-HBQ7392367.1;Parent=gene-L8R42_004344;Dbxref=NCBI_GP:HBQ7392367.1;Name=HBQ7392367.1;gbkey=CDS;gene=sdiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=L8R42_004344;product=transcriptional regulator SdiA;protein_id=HBQ7392367.1;transl_table=11 DAFVNP010000119.1 tpg gene 836 1060 . - . ID=gene-L8R42_004345;Name=L8R42_004345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004345 DAFVNP010000119.1 Protein Homology CDS 836 1060 . - 0 ID=cds-HBQ7392368.1;Parent=gene-L8R42_004345;Dbxref=NCBI_GP:HBQ7392368.1;Name=HBQ7392368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=L8R42_004345;product=DUF2594 family protein;protein_id=HBQ7392368.1;transl_table=11 DAFVNP010000119.1 tpg gene 1057 1212 . - . ID=gene-L8R42_004346;Name=L8R42_004346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004346 DAFVNP010000119.1 Protein Homology CDS 1057 1212 . - 0 ID=cds-HBQ7392369.1;Parent=gene-L8R42_004346;Dbxref=NCBI_GP:HBQ7392369.1;Name=HBQ7392369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=L8R42_004346;product=hypothetical protein;protein_id=HBQ7392369.1;transl_table=11 DAFVNP010000119.1 tpg gene 1524 2180 . + . ID=gene-L8R42_004347;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=L8R42_004347 DAFVNP010000119.1 Protein Homology CDS 1524 2180 . + 0 ID=cds-HBQ7392370.1;Parent=gene-L8R42_004347;Dbxref=NCBI_GP:HBQ7392370.1;Name=HBQ7392370.1;gbkey=CDS;gene=uvrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=L8R42_004347;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=HBQ7392370.1;transl_table=11 DAFVNP010000119.1 tpg gene 2177 4009 . + . ID=gene-L8R42_004348;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=L8R42_004348 DAFVNP010000119.1 Protein Homology CDS 2177 4009 . + 0 ID=cds-HBQ7392371.1;Parent=gene-L8R42_004348;Dbxref=NCBI_GP:HBQ7392371.1;Name=HBQ7392371.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=L8R42_004348;product=excinuclease ABC subunit UvrC;protein_id=HBQ7392371.1;transl_table=11 DAFVNP010000119.1 tpg gene 4066 4614 . + . ID=gene-L8R42_004349;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=L8R42_004349 DAFVNP010000119.1 Protein Homology CDS 4066 4614 . + 0 ID=cds-HBQ7392372.1;Parent=gene-L8R42_004349;Dbxref=NCBI_GP:HBQ7392372.1;Name=HBQ7392372.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=L8R42_004349;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=HBQ7392372.1;transl_table=11 DAFVNP010000119.1 tpg gene 4766 4841 . + . ID=gene-L8R42_004350;Name=L8R42_004350;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004350 DAFVNP010000119.1 tRNAscan-SE tRNA 4766 4841 . + . ID=rna-L8R42_004350;Parent=gene-L8R42_004350;anticodon=(pos:4799..4801);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004350;product=tRNA-Gly DAFVNP010000119.1 tRNAscan-SE exon 4766 4841 . + . ID=exon-L8R42_004350-1;Parent=rna-L8R42_004350;anticodon=(pos:4799..4801);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004350;product=tRNA-Gly DAFVNP010000119.1 tpg gene 4894 4967 . + . ID=gene-L8R42_004351;Name=L8R42_004351;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004351 DAFVNP010000119.1 tRNAscan-SE tRNA 4894 4967 . + . ID=rna-L8R42_004351;Parent=gene-L8R42_004351;anticodon=(pos:4926..4928);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004351;product=tRNA-Cys DAFVNP010000119.1 tRNAscan-SE exon 4894 4967 . + . ID=exon-L8R42_004351-1;Parent=rna-L8R42_004351;anticodon=(pos:4926..4928);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004351;product=tRNA-Cys DAFVNP010000119.1 tpg gene 4979 5065 . + . ID=gene-L8R42_004352;Name=L8R42_004352;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004352 DAFVNP010000119.1 tRNAscan-SE tRNA 4979 5065 . + . ID=rna-L8R42_004352;Parent=gene-L8R42_004352;anticodon=(pos:5013..5015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004352;product=tRNA-Leu DAFVNP010000119.1 tRNAscan-SE exon 4979 5065 . + . ID=exon-L8R42_004352-1;Parent=rna-L8R42_004352;anticodon=(pos:5013..5015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004352;product=tRNA-Leu DAFVNP010000119.1 tpg gene 5316 5648 . + . ID=gene-L8R42_004353;Name=L8R42_004353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004353 DAFVNP010000119.1 Protein Homology CDS 5316 5648 . + 0 ID=cds-HBQ7392373.1;Parent=gene-L8R42_004353;Dbxref=NCBI_GP:HBQ7392373.1;Name=HBQ7392373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=L8R42_004353;product=hypothetical protein;protein_id=HBQ7392373.1;transl_table=11 DAFVNP010000119.1 tpg gene 5862 7301 . + . ID=gene-L8R42_004354;Name=L8R42_004354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004354 DAFVNP010000119.1 Protein Homology CDS 5862 7301 . + 0 ID=cds-HBQ7392374.1;Parent=gene-L8R42_004354;Dbxref=NCBI_GP:HBQ7392374.1;Name=HBQ7392374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=L8R42_004354;product=SH3 domain-containing protein;protein_id=HBQ7392374.1;transl_table=11 DAFVNP010000119.1 tpg gene 7514 7840 . + . ID=gene-L8R42_004355;Name=L8R42_004355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004355 DAFVNP010000119.1 Protein Homology CDS 7514 7840 . + 0 ID=cds-HBQ7392375.1;Parent=gene-L8R42_004355;Dbxref=NCBI_GP:HBQ7392375.1;Name=HBQ7392375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=L8R42_004355;product=glucose-6-phosphate dehydrogenase;protein_id=HBQ7392375.1;transl_table=11 DAFVNP010000119.1 tpg gene 8079 8744 . + . ID=gene-L8R42_004356;Name=L8R42_004356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004356 DAFVNP010000119.1 Protein Homology CDS 8079 8744 . + 0 ID=cds-HBQ7392376.1;Parent=gene-L8R42_004356;Dbxref=NCBI_GP:HBQ7392376.1;Name=HBQ7392376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=L8R42_004356;product=YecA family protein;protein_id=HBQ7392376.1;transl_table=11 DAFVNP010000119.1 tpg gene 8819 10030 . - . ID=gene-L8R42_004357;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=L8R42_004357 DAFVNP010000119.1 Protein Homology CDS 8819 10030 . - 0 ID=cds-HBQ7392377.1;Parent=gene-L8R42_004357;Dbxref=NCBI_GP:HBQ7392377.1;Name=HBQ7392377.1;gbkey=CDS;gene=tyrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=L8R42_004357;product=tyrosine transporter TyrP;protein_id=HBQ7392377.1;transl_table=11 DAFVNP010000119.1 tpg gene 10257 10496 . + . ID=gene-L8R42_004358;Name=L8R42_004358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004358 DAFVNP010000119.1 Protein Homology CDS 10257 10496 . + 0 ID=cds-HBQ7392378.1;Parent=gene-L8R42_004358;Dbxref=NCBI_GP:HBQ7392378.1;Name=HBQ7392378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=L8R42_004358;product=YecH family protein;protein_id=HBQ7392378.1;transl_table=11 DAFVNP010000119.1 tpg gene 10542 11000 . - . ID=gene-L8R42_004359;Name=ftnA;end_range=11000,.;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=L8R42_004359;partial=true DAFVNP010000119.1 Protein Homology CDS 10542 11000 . - 0 ID=cds-HBQ7392379.1;Parent=gene-L8R42_004359;Dbxref=NCBI_GP:HBQ7392379.1;Name=HBQ7392379.1;end_range=11000,.;gbkey=CDS;gene=ftnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=L8R42_004359;partial=true;product=non-heme ferritin;protein_id=HBQ7392379.1;transl_table=11 ##sequence-region DAFVNP010000120.1 1 10618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000120.1 tpg region 1 10618 . + . ID=DAFVNP010000120.1:1..10618;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000120.1 tpg gene 1 376 . + . ID=gene-L8R42_004360;Name=L8R42_004360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004360;partial=true;start_range=.,1 DAFVNP010000120.1 Protein Homology CDS 1 376 . + 1 ID=cds-HBQ7392380.1;Parent=gene-L8R42_004360;Dbxref=NCBI_GP:HBQ7392380.1;Name=HBQ7392380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=L8R42_004360;partial=true;product=STM0539 family protein;protein_id=HBQ7392380.1;start_range=.,1;transl_table=11 DAFVNP010000120.1 tpg gene 373 1197 . + . ID=gene-L8R42_004361;Name=L8R42_004361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004361 DAFVNP010000120.1 Protein Homology CDS 373 1197 . + 0 ID=cds-HBQ7392381.1;Parent=gene-L8R42_004361;Dbxref=NCBI_GP:HBQ7392381.1;Name=HBQ7392381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=L8R42_004361;product=DUF2145 domain-containing protein;protein_id=HBQ7392381.1;transl_table=11 DAFVNP010000120.1 tpg gene 1241 2626 . - . ID=gene-L8R42_004362;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=L8R42_004362 DAFVNP010000120.1 Protein Homology CDS 1241 2626 . - 0 ID=cds-HBQ7392382.1;Parent=gene-L8R42_004362;Dbxref=NCBI_GP:HBQ7392382.1;Name=HBQ7392382.1;gbkey=CDS;gene=cysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=L8R42_004362;product=cysteine--tRNA ligase;protein_id=HBQ7392382.1;transl_table=11 DAFVNP010000120.1 tpg gene 2799 3293 . + . ID=gene-L8R42_004363;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=L8R42_004363 DAFVNP010000120.1 Protein Homology CDS 2799 3293 . + 0 ID=cds-HBQ7392383.1;Parent=gene-L8R42_004363;Dbxref=NCBI_GP:HBQ7392383.1;Name=HBQ7392383.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=L8R42_004363;product=peptidylprolyl isomerase B;protein_id=HBQ7392383.1;transl_table=11 DAFVNP010000120.1 tpg gene 3296 4018 . + . ID=gene-L8R42_004364;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=L8R42_004364 DAFVNP010000120.1 Protein Homology CDS 3296 4018 . + 0 ID=cds-HBQ7392384.1;Parent=gene-L8R42_004364;Dbxref=NCBI_GP:HBQ7392384.1;Name=HBQ7392384.1;gbkey=CDS;gene=lpxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=L8R42_004364;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=HBQ7392384.1;transl_table=11 DAFVNP010000120.1 tpg gene 4136 4645 . + . ID=gene-L8R42_004365;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=L8R42_004365 DAFVNP010000120.1 Protein Homology CDS 4136 4645 . + 0 ID=cds-HBQ7392385.1;Parent=gene-L8R42_004365;Dbxref=NCBI_GP:HBQ7392385.1;Name=HBQ7392385.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=L8R42_004365;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=HBQ7392385.1;transl_table=11 DAFVNP010000120.1 tpg gene 4642 5709 . + . ID=gene-L8R42_004366;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=L8R42_004366 DAFVNP010000120.1 Protein Homology CDS 4642 5709 . + 0 ID=cds-HBQ7392386.1;Parent=gene-L8R42_004366;Dbxref=NCBI_GP:HBQ7392386.1;Name=HBQ7392386.1;gbkey=CDS;gene=purK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=L8R42_004366;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=HBQ7392386.1;transl_table=11 DAFVNP010000120.1 tpg gene 5750 6643 . - . ID=gene-L8R42_004367;Name=L8R42_004367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004367 DAFVNP010000120.1 Protein Homology CDS 5750 6643 . - 0 ID=cds-HBQ7392387.1;Parent=gene-L8R42_004367;Dbxref=NCBI_GP:HBQ7392387.1;Name=HBQ7392387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=L8R42_004367;product=carbamate kinase;protein_id=HBQ7392387.1;transl_table=11 DAFVNP010000120.1 tpg gene 6647 7456 . - . ID=gene-L8R42_004368;Name=L8R42_004368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004368 DAFVNP010000120.1 Protein Homology CDS 6647 7456 . - 0 ID=cds-HBQ7392388.1;Parent=gene-L8R42_004368;Dbxref=NCBI_GP:HBQ7392388.1;Name=HBQ7392388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=L8R42_004368;product=DUF2877 domain-containing protein;protein_id=HBQ7392388.1;transl_table=11 DAFVNP010000120.1 tpg gene 7468 8727 . - . ID=gene-L8R42_004369;Name=L8R42_004369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004369 DAFVNP010000120.1 Protein Homology CDS 7468 8727 . - 0 ID=cds-HBQ7392389.1;Parent=gene-L8R42_004369;Dbxref=NCBI_GP:HBQ7392389.1;Name=HBQ7392389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=L8R42_004369;product=DUF1116 domain-containing protein;protein_id=HBQ7392389.1;transl_table=11 DAFVNP010000120.1 tpg gene 8737 10401 . - . ID=gene-L8R42_004370;Name=L8R42_004370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004370 DAFVNP010000120.1 Protein Homology CDS 8737 10401 . - 0 ID=cds-HBQ7392390.1;Parent=gene-L8R42_004370;Dbxref=NCBI_GP:HBQ7392390.1;Name=HBQ7392390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=L8R42_004370;product=acyl-CoA synthetase FdrA;protein_id=HBQ7392390.1;transl_table=11 ##sequence-region DAFVNP010000121.1 1 10605 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000121.1 tpg region 1 10605 . + . ID=DAFVNP010000121.1:1..10605;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000121.1 tpg gene 400 687 . + . ID=gene-L8R42_004371;Name=L8R42_004371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004371 DAFVNP010000121.1 Protein Homology CDS 400 687 . + 0 ID=cds-HBQ7392391.1;Parent=gene-L8R42_004371;Dbxref=NCBI_GP:HBQ7392391.1;Name=HBQ7392391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=L8R42_004371;product=putative holin;protein_id=HBQ7392391.1;transl_table=11 DAFVNP010000121.1 tpg gene 690 1295 . + . ID=gene-L8R42_004372;Name=L8R42_004372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004372 DAFVNP010000121.1 Protein Homology CDS 690 1295 . + 0 ID=cds-HBQ7392392.1;Parent=gene-L8R42_004372;Dbxref=NCBI_GP:HBQ7392392.1;Name=HBQ7392392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=L8R42_004372;product=lytic transglycosylase domain-containing protein;protein_id=HBQ7392392.1;transl_table=11 DAFVNP010000121.1 tpg gene 1308 1622 . + . ID=gene-L8R42_004373;Name=L8R42_004373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004373 DAFVNP010000121.1 Protein Homology CDS 1308 1622 . + 0 ID=cds-HBQ7392393.1;Parent=gene-L8R42_004373;Dbxref=NCBI_GP:HBQ7392393.1;Name=HBQ7392393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=L8R42_004373;product=hypothetical protein;protein_id=HBQ7392393.1;transl_table=11 DAFVNP010000121.1 tpg gene 1781 2236 . + . ID=gene-L8R42_004374;Name=L8R42_004374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004374 DAFVNP010000121.1 Protein Homology CDS 1781 2236 . + 0 ID=cds-HBQ7392394.1;Parent=gene-L8R42_004374;Dbxref=NCBI_GP:HBQ7392394.1;Name=HBQ7392394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=L8R42_004374;product=Gp37 family protein;protein_id=HBQ7392394.1;transl_table=11 DAFVNP010000121.1 tpg gene 2233 2430 . + . ID=gene-L8R42_004375;Name=L8R42_004375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004375 DAFVNP010000121.1 Protein Homology CDS 2233 2430 . + 0 ID=cds-HBQ7392395.1;Parent=gene-L8R42_004375;Dbxref=NCBI_GP:HBQ7392395.1;Name=HBQ7392395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=L8R42_004375;product=hypothetical protein;protein_id=HBQ7392395.1;transl_table=11 DAFVNP010000121.1 tpg gene 2420 3847 . + . ID=gene-L8R42_004376;Name=L8R42_004376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004376 DAFVNP010000121.1 Protein Homology CDS 2420 3847 . + 0 ID=cds-HBQ7392396.1;Parent=gene-L8R42_004376;Dbxref=NCBI_GP:HBQ7392396.1;Name=HBQ7392396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=L8R42_004376;product=phage tail sheath family protein;protein_id=HBQ7392396.1;transl_table=11 DAFVNP010000121.1 tpg gene 3847 4371 . + . ID=gene-L8R42_004377;Name=L8R42_004377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004377 DAFVNP010000121.1 Protein Homology CDS 3847 4371 . + 0 ID=cds-HBQ7392397.1;Parent=gene-L8R42_004377;Dbxref=NCBI_GP:HBQ7392397.1;Name=HBQ7392397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=L8R42_004377;product=phage major tail tube protein;protein_id=HBQ7392397.1;transl_table=11 DAFVNP010000121.1 tpg gene 4423 4740 . + . ID=gene-L8R42_004378;Name=L8R42_004378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004378 DAFVNP010000121.1 Protein Homology CDS 4423 4740 . + 0 ID=cds-HBQ7392398.1;Parent=gene-L8R42_004378;Dbxref=NCBI_GP:HBQ7392398.1;Name=HBQ7392398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=L8R42_004378;product=phage tail assembly protein;protein_id=HBQ7392398.1;transl_table=11 DAFVNP010000121.1 tpg gene 4700 4828 . + . ID=gene-L8R42_004379;Name=L8R42_004379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004379 DAFVNP010000121.1 Protein Homology CDS 4700 4828 . + 0 ID=cds-HBQ7392399.1;Parent=gene-L8R42_004379;Dbxref=NCBI_GP:HBQ7392399.1;Name=HBQ7392399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=L8R42_004379;product=GpE family phage tail protein;protein_id=HBQ7392399.1;transl_table=11 DAFVNP010000121.1 tpg gene 4925 7279 . + . ID=gene-L8R42_004380;Name=L8R42_004380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004380 DAFVNP010000121.1 Protein Homology CDS 4925 7279 . + 0 ID=cds-HBQ7392400.1;Parent=gene-L8R42_004380;Dbxref=NCBI_GP:HBQ7392400.1;Name=HBQ7392400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=L8R42_004380;product=phage tail tape measure protein;protein_id=HBQ7392400.1;transl_table=11 DAFVNP010000121.1 tpg gene 7279 8232 . + . ID=gene-L8R42_004381;Name=L8R42_004381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004381 DAFVNP010000121.1 Protein Homology CDS 7279 8232 . + 0 ID=cds-HBQ7392401.1;Parent=gene-L8R42_004381;Dbxref=NCBI_GP:HBQ7392401.1;Name=HBQ7392401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=L8R42_004381;product=phage tail protein;protein_id=HBQ7392401.1;transl_table=11 DAFVNP010000121.1 tpg gene 8232 8441 . + . ID=gene-L8R42_004382;Name=L8R42_004382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004382 DAFVNP010000121.1 Protein Homology CDS 8232 8441 . + 0 ID=cds-HBQ7392402.1;Parent=gene-L8R42_004382;Dbxref=NCBI_GP:HBQ7392402.1;Name=HBQ7392402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=L8R42_004382;product=tail protein X;protein_id=HBQ7392402.1;transl_table=11 DAFVNP010000121.1 tpg gene 8429 9472 . + . ID=gene-L8R42_004383;Name=L8R42_004383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004383 DAFVNP010000121.1 Protein Homology CDS 8429 9472 . + 0 ID=cds-HBQ7392403.1;Parent=gene-L8R42_004383;Dbxref=NCBI_GP:HBQ7392403.1;Name=HBQ7392403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=L8R42_004383;product=phage late control D family protein;protein_id=HBQ7392403.1;transl_table=11 DAFVNP010000121.1 tpg gene 9482 10204 . + . ID=gene-L8R42_004384;Name=L8R42_004384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004384 DAFVNP010000121.1 Protein Homology CDS 9482 10204 . + 0 ID=cds-HBQ7392404.1;Parent=gene-L8R42_004384;Dbxref=NCBI_GP:HBQ7392404.1;Name=HBQ7392404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=L8R42_004384;product=phage baseplate assembly protein V;protein_id=HBQ7392404.1;transl_table=11 DAFVNP010000121.1 tpg gene 10532 10605 . + . ID=gene-L8R42_004385;Name=L8R42_004385;end_range=10605,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004385;partial=true DAFVNP010000121.1 Protein Homology CDS 10532 10605 . + 0 ID=cds-HBQ7392405.1;Parent=gene-L8R42_004385;Dbxref=NCBI_GP:HBQ7392405.1;Name=HBQ7392405.1;end_range=10605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=L8R42_004385;partial=true;product=GtrA family protein;protein_id=HBQ7392405.1;transl_table=11 ##sequence-region DAFVNP010000122.1 1 10569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000122.1 tpg region 1 10569 . + . ID=DAFVNP010000122.1:1..10569;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000122.1 tpg gene 373 1416 . + . ID=gene-L8R42_004386;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=L8R42_004386 DAFVNP010000122.1 Protein Homology CDS 373 1416 . + 0 ID=cds-HBQ7392406.1;Parent=gene-L8R42_004386;Dbxref=NCBI_GP:HBQ7392406.1;Name=HBQ7392406.1;gbkey=CDS;gene=nadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=L8R42_004386;product=quinolinate synthase NadA;protein_id=HBQ7392406.1;transl_table=11 DAFVNP010000122.1 tpg gene 1441 2160 . + . ID=gene-L8R42_004387;Name=L8R42_004387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004387 DAFVNP010000122.1 Protein Homology CDS 1441 2160 . + 0 ID=cds-HBQ7392407.1;Parent=gene-L8R42_004387;Dbxref=NCBI_GP:HBQ7392407.1;Name=HBQ7392407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=L8R42_004387;product=nicotinamide riboside transporter PnuC;protein_id=HBQ7392407.1;transl_table=11 DAFVNP010000122.1 tpg gene 2157 3095 . - . ID=gene-L8R42_004388;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=L8R42_004388 DAFVNP010000122.1 Protein Homology CDS 2157 3095 . - 0 ID=cds-HBQ7392408.1;Parent=gene-L8R42_004388;Dbxref=NCBI_GP:HBQ7392408.1;Name=HBQ7392408.1;gbkey=CDS;gene=zitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=L8R42_004388;product=CDF family zinc transporter ZitB;protein_id=HBQ7392408.1;transl_table=11 DAFVNP010000122.1 tpg gene 3206 3592 . - . ID=gene-L8R42_004389;Name=L8R42_004389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004389 DAFVNP010000122.1 Protein Homology CDS 3206 3592 . - 0 ID=cds-HBQ7392409.1;Parent=gene-L8R42_004389;Dbxref=NCBI_GP:HBQ7392409.1;Name=HBQ7392409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=L8R42_004389;product=YbgS-like family protein;protein_id=HBQ7392409.1;transl_table=11 DAFVNP010000122.1 tpg gene 3912 4964 . + . ID=gene-L8R42_004390;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=L8R42_004390 DAFVNP010000122.1 Protein Homology CDS 3912 4964 . + 0 ID=cds-HBQ7392410.1;Parent=gene-L8R42_004390;Dbxref=NCBI_GP:HBQ7392410.1;Name=HBQ7392410.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=L8R42_004390;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=HBQ7392410.1;transl_table=11 DAFVNP010000122.1 tpg gene 5058 5603 . - . ID=gene-L8R42_004391;Name=L8R42_004391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004391 DAFVNP010000122.1 Protein Homology CDS 5058 5603 . - 0 ID=cds-HBQ7392411.1;Parent=gene-L8R42_004391;Dbxref=NCBI_GP:HBQ7392411.1;Name=HBQ7392411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=L8R42_004391;product=fumarate hydratase subunit beta;protein_id=HBQ7392411.1;transl_table=11 DAFVNP010000122.1 tpg gene 5618 6463 . - . ID=gene-L8R42_004392;Name=L8R42_004392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004392 DAFVNP010000122.1 Protein Homology CDS 5618 6463 . - 0 ID=cds-HBQ7392412.1;Parent=gene-L8R42_004392;Dbxref=NCBI_GP:HBQ7392412.1;Name=HBQ7392412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=L8R42_004392;product=fumarate hydratase;protein_id=HBQ7392412.1;transl_table=11 DAFVNP010000122.1 tpg gene 6593 7483 . + . ID=gene-L8R42_004393;Name=L8R42_004393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004393 DAFVNP010000122.1 Protein Homology CDS 6593 7483 . + 0 ID=cds-HBQ7392413.1;Parent=gene-L8R42_004393;Dbxref=NCBI_GP:HBQ7392413.1;Name=HBQ7392413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=L8R42_004393;product=LysR family transcriptional regulator;protein_id=HBQ7392413.1;transl_table=11 DAFVNP010000122.1 tpg gene 7484 8467 . - . ID=gene-L8R42_004394;Name=L8R42_004394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004394 DAFVNP010000122.1 Protein Homology CDS 7484 8467 . - 0 ID=cds-HBQ7392414.1;Parent=gene-L8R42_004394;Dbxref=NCBI_GP:HBQ7392414.1;Name=HBQ7392414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=L8R42_004394;product=LysR family transcriptional regulator;protein_id=HBQ7392414.1;transl_table=11 DAFVNP010000122.1 tpg gene 8689 9957 . + . ID=gene-L8R42_004395;Name=L8R42_004395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004395 DAFVNP010000122.1 Protein Homology CDS 8689 9957 . + 0 ID=cds-HBQ7392415.1;Parent=gene-L8R42_004395;Dbxref=NCBI_GP:HBQ7392415.1;Name=HBQ7392415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=L8R42_004395;product=SLC13/DASS family transporter;protein_id=HBQ7392415.1;transl_table=11 DAFVNP010000122.1 tpg gene 10007 10255 . + . ID=gene-L8R42_004396;Name=L8R42_004396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004396 DAFVNP010000122.1 Protein Homology CDS 10007 10255 . + 0 ID=cds-HBQ7392416.1;Parent=gene-L8R42_004396;Dbxref=NCBI_GP:HBQ7392416.1;Name=HBQ7392416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=L8R42_004396;product=oxaloacetate decarboxylase subunit gamma;protein_id=HBQ7392416.1;transl_table=11 DAFVNP010000122.1 tpg gene 10271 10569 . + . ID=gene-L8R42_004397;Name=L8R42_004397;end_range=10569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004397;partial=true DAFVNP010000122.1 Protein Homology CDS 10271 10569 . + 0 ID=cds-HBQ7392417.1;Parent=gene-L8R42_004397;Dbxref=NCBI_GP:HBQ7392417.1;Name=HBQ7392417.1;Note=catalyzes the formation of pyruvate from oxaloacetate;end_range=10569,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=L8R42_004397;partial=true;product=oxaloacetate decarboxylase;protein_id=HBQ7392417.1;transl_table=11 ##sequence-region DAFVNP010000123.1 1 10547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000123.1 tpg region 1 10547 . + . ID=DAFVNP010000123.1:1..10547;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000123.1 tpg gene 67 909 . - . ID=gene-L8R42_004398;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=L8R42_004398 DAFVNP010000123.1 Protein Homology CDS 67 909 . - 0 ID=cds-HBQ7392418.1;Parent=gene-L8R42_004398;Dbxref=NCBI_GP:HBQ7392418.1;Name=HBQ7392418.1;gbkey=CDS;gene=purU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=L8R42_004398;product=formyltetrahydrofolate deformylase;protein_id=HBQ7392418.1;transl_table=11 DAFVNP010000123.1 tpg gene 960 1418 . - . ID=gene-L8R42_004399;Name=L8R42_004399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004399 DAFVNP010000123.1 Protein Homology CDS 960 1418 . - 0 ID=cds-HBQ7392419.1;Parent=gene-L8R42_004399;Dbxref=NCBI_GP:HBQ7392419.1;Name=HBQ7392419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=L8R42_004399;product=YchJ family protein;protein_id=HBQ7392419.1;transl_table=11 DAFVNP010000123.1 tpg gene 1529 2434 . + . ID=gene-L8R42_004400;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=L8R42_004400 DAFVNP010000123.1 Protein Homology CDS 1529 2434 . + 0 ID=cds-HBQ7392420.1;Parent=gene-L8R42_004400;Dbxref=NCBI_GP:HBQ7392420.1;Name=HBQ7392420.1;gbkey=CDS;gene=rssA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=L8R42_004400;product=patatin-like phospholipase RssA;protein_id=HBQ7392420.1;transl_table=11 DAFVNP010000123.1 tpg gene 2525 3538 . + . ID=gene-L8R42_004401;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=L8R42_004401 DAFVNP010000123.1 Protein Homology CDS 2525 3538 . + 0 ID=cds-HBQ7392421.1;Parent=gene-L8R42_004401;Dbxref=NCBI_GP:HBQ7392421.1;Name=HBQ7392421.1;gbkey=CDS;gene=rssB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=L8R42_004401;product=two-component system response regulator RssB;protein_id=HBQ7392421.1;transl_table=11 DAFVNP010000123.1 tpg gene 3741 4649 . + . ID=gene-L8R42_004402;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=L8R42_004402 DAFVNP010000123.1 Protein Homology CDS 3741 4649 . + 0 ID=cds-HBQ7392422.1;Parent=gene-L8R42_004402;Dbxref=NCBI_GP:HBQ7392422.1;Name=HBQ7392422.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=L8R42_004402;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=HBQ7392422.1;transl_table=11 DAFVNP010000123.1 tpg gene 4781 5194 . - . ID=gene-L8R42_004403;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=L8R42_004403 DAFVNP010000123.1 Protein Homology CDS 4781 5194 . - 0 ID=cds-HBQ7392423.1;Parent=gene-L8R42_004403;Dbxref=NCBI_GP:HBQ7392423.1;Name=HBQ7392423.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=L8R42_004403;product=DNA-binding transcriptional regulator H-NS;protein_id=HBQ7392423.1;transl_table=11 DAFVNP010000123.1 tpg gene 5857 6474 . + . ID=gene-L8R42_004404;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=L8R42_004404 DAFVNP010000123.1 Protein Homology CDS 5857 6474 . + 0 ID=cds-HBQ7392424.1;Parent=gene-L8R42_004404;Dbxref=NCBI_GP:HBQ7392424.1;Name=HBQ7392424.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=L8R42_004404;product=thymidine kinase;protein_id=HBQ7392424.1;transl_table=11 DAFVNP010000123.1 tpg gene 6671 9349 . - . ID=gene-L8R42_004405;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=L8R42_004405 DAFVNP010000123.1 Protein Homology CDS 6671 9349 . - 0 ID=cds-HBQ7392425.1;Parent=gene-L8R42_004405;Dbxref=NCBI_GP:HBQ7392425.1;Name=HBQ7392425.1;gbkey=CDS;gene=adhE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=L8R42_004405;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=HBQ7392425.1;transl_table=11 DAFVNP010000123.1 tpg gene 9826 10473 . + . ID=gene-L8R42_004406;Name=L8R42_004406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004406 DAFVNP010000123.1 Protein Homology CDS 9826 10473 . + 0 ID=cds-HBQ7392426.1;Parent=gene-L8R42_004406;Dbxref=NCBI_GP:HBQ7392426.1;Name=HBQ7392426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=L8R42_004406;product=YchE family NAAT transporter;protein_id=HBQ7392426.1;transl_table=11 ##sequence-region DAFVNP010000124.1 1 10401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000124.1 tpg region 1 10401 . + . ID=DAFVNP010000124.1:1..10401;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000124.1 tpg gene 1 830 . + . ID=gene-L8R42_004407;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=L8R42_004407;partial=true;start_range=.,1 DAFVNP010000124.1 Protein Homology CDS 1 830 . + 2 ID=cds-HBQ7392427.1;Parent=gene-L8R42_004407;Dbxref=NCBI_GP:HBQ7392427.1;Name=HBQ7392427.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=L8R42_004407;partial=true;product=replicative DNA helicase;protein_id=HBQ7392427.1;start_range=.,1;transl_table=11 DAFVNP010000124.1 tpg gene 862 1941 . + . ID=gene-L8R42_004408;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=L8R42_004408 DAFVNP010000124.1 Protein Homology CDS 862 1941 . + 0 ID=cds-HBQ7392428.1;Parent=gene-L8R42_004408;Dbxref=NCBI_GP:HBQ7392428.1;Name=HBQ7392428.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=L8R42_004408;product=alanine racemase;protein_id=HBQ7392428.1;transl_table=11 DAFVNP010000124.1 tpg gene 2127 3320 . + . ID=gene-L8R42_004409;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=L8R42_004409 DAFVNP010000124.1 Protein Homology CDS 2127 3320 . + 0 ID=cds-HBQ7392429.1;Parent=gene-L8R42_004409;Dbxref=NCBI_GP:HBQ7392429.1;Name=HBQ7392429.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=L8R42_004409;product=aromatic amino acid transaminase;protein_id=HBQ7392429.1;transl_table=11 DAFVNP010000124.1 tpg gene 3507 4220 . + . ID=gene-L8R42_004410;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=L8R42_004410 DAFVNP010000124.1 Protein Homology CDS 3507 4220 . + 0 ID=cds-HBQ7392430.1;Parent=gene-L8R42_004410;Dbxref=NCBI_GP:HBQ7392430.1;Name=HBQ7392430.1;gbkey=CDS;gene=aphA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=L8R42_004410;product=acid phosphatase AphA;protein_id=HBQ7392430.1;transl_table=11 DAFVNP010000124.1 tpg gene 4349 4765 . + . ID=gene-L8R42_004411;Name=L8R42_004411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004411 DAFVNP010000124.1 Protein Homology CDS 4349 4765 . + 0 ID=cds-HBQ7392431.1;Parent=gene-L8R42_004411;Dbxref=NCBI_GP:HBQ7392431.1;Name=HBQ7392431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=L8R42_004411;product=YjbQ family protein;protein_id=HBQ7392431.1;transl_table=11 DAFVNP010000124.1 tpg gene 4768 5124 . + . ID=gene-L8R42_004412;Name=L8R42_004412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004412 DAFVNP010000124.1 Protein Homology CDS 4768 5124 . + 0 ID=cds-HBQ7392432.1;Parent=gene-L8R42_004412;Dbxref=NCBI_GP:HBQ7392432.1;Name=HBQ7392432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=L8R42_004412;product=MmcQ/YjbR family DNA-binding protein;protein_id=HBQ7392432.1;transl_table=11 DAFVNP010000124.1 tpg gene 5125 5463 . - . ID=gene-L8R42_004413;Name=L8R42_004413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004413 DAFVNP010000124.1 Protein Homology CDS 5125 5463 . - 0 ID=cds-HBQ7392433.1;Parent=gene-L8R42_004413;Dbxref=NCBI_GP:HBQ7392433.1;Name=HBQ7392433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=L8R42_004413;product=hypothetical protein;protein_id=HBQ7392433.1;transl_table=11 DAFVNP010000124.1 tpg gene 5450 5905 . - . ID=gene-L8R42_004414;Name=L8R42_004414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004414 DAFVNP010000124.1 Protein Homology CDS 5450 5905 . - 0 ID=cds-HBQ7392434.1;Parent=gene-L8R42_004414;Dbxref=NCBI_GP:HBQ7392434.1;Name=HBQ7392434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=L8R42_004414;product=hypothetical protein;protein_id=HBQ7392434.1;transl_table=11 DAFVNP010000124.1 tpg gene 6037 8862 . - . ID=gene-L8R42_004415;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=L8R42_004415 DAFVNP010000124.1 Protein Homology CDS 6037 8862 . - 0 ID=cds-HBQ7392435.1;Parent=gene-L8R42_004415;Dbxref=NCBI_GP:HBQ7392435.1;Name=HBQ7392435.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=L8R42_004415;product=excinuclease ABC subunit UvrA;protein_id=HBQ7392435.1;transl_table=11 DAFVNP010000124.1 tpg gene 9110 9640 . + . ID=gene-L8R42_004416;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=L8R42_004416 DAFVNP010000124.1 Protein Homology CDS 9110 9640 . + 0 ID=cds-HBQ7392436.1;Parent=gene-L8R42_004416;Dbxref=NCBI_GP:HBQ7392436.1;Name=HBQ7392436.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=L8R42_004416;product=single-stranded DNA-binding protein SSB1;protein_id=HBQ7392436.1;transl_table=11 ##sequence-region DAFVNP010000125.1 1 10299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000125.1 tpg region 1 10299 . + . ID=DAFVNP010000125.1:1..10299;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000125.1 tpg gene 1 231 . - . ID=gene-L8R42_004417;Name=L8R42_004417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004417;partial=true;start_range=.,1 DAFVNP010000125.1 Protein Homology CDS 1 231 . - 0 ID=cds-HBQ7392437.1;Parent=gene-L8R42_004417;Dbxref=NCBI_GP:HBQ7392437.1;Name=HBQ7392437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=L8R42_004417;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=HBQ7392437.1;start_range=.,1;transl_table=11 DAFVNP010000125.1 tpg gene 215 1825 . - . ID=gene-L8R42_004418;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=L8R42_004418 DAFVNP010000125.1 Protein Homology CDS 215 1825 . - 0 ID=cds-HBQ7392438.1;Parent=gene-L8R42_004418;Dbxref=NCBI_GP:HBQ7392438.1;Name=HBQ7392438.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=L8R42_004418;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=HBQ7392438.1;transl_table=11 DAFVNP010000125.1 tpg gene 1801 2784 . - . ID=gene-L8R42_004419;Name=L8R42_004419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004419 DAFVNP010000125.1 Protein Homology CDS 1801 2784 . - 0 ID=cds-HBQ7392439.1;Parent=gene-L8R42_004419;Dbxref=NCBI_GP:HBQ7392439.1;Name=HBQ7392439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=L8R42_004419;product=thiamine ABC transporter substrate binding subunit;protein_id=HBQ7392439.1;transl_table=11 DAFVNP010000125.1 cmsearch riboswitch 2816 2915 . - . ID=id-DAFVNP010000125.1:2816..2915;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch DAFVNP010000125.1 tpg gene 2962 4620 . - . ID=gene-L8R42_004420;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=L8R42_004420 DAFVNP010000125.1 Protein Homology CDS 2962 4620 . - 0 ID=cds-HBQ7392440.1;Parent=gene-L8R42_004420;Dbxref=NCBI_GP:HBQ7392440.1;Name=HBQ7392440.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=L8R42_004420;product=HTH-type transcriptional regulator SgrR;protein_id=HBQ7392440.1;transl_table=11 DAFVNP010000125.1 tpg gene 4713 4835 . + . ID=gene-L8R42_004421;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=L8R42_004421 DAFVNP010000125.1 Protein Homology CDS 4713 4835 . + 0 ID=cds-HBQ7392441.1;Parent=gene-L8R42_004421;Dbxref=NCBI_GP:HBQ7392441.1;Name=HBQ7392441.1;gbkey=CDS;gene=sgrT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=L8R42_004421;product=glucose uptake inhibitor SgrT;protein_id=HBQ7392441.1;transl_table=11 DAFVNP010000125.1 tpg gene 5121 5726 . - . ID=gene-L8R42_004422;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=L8R42_004422 DAFVNP010000125.1 Protein Homology CDS 5121 5726 . - 0 ID=cds-HBQ7392442.1;Parent=gene-L8R42_004422;Dbxref=NCBI_GP:HBQ7392442.1;Name=HBQ7392442.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=L8R42_004422;product=3-isopropylmalate dehydratase small subunit;protein_id=HBQ7392442.1;transl_table=11 DAFVNP010000125.1 tpg gene 5737 7137 . - . ID=gene-L8R42_004423;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=L8R42_004423 DAFVNP010000125.1 Protein Homology CDS 5737 7137 . - 0 ID=cds-HBQ7392443.1;Parent=gene-L8R42_004423;Dbxref=NCBI_GP:HBQ7392443.1;Name=HBQ7392443.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=L8R42_004423;product=3-isopropylmalate dehydratase large subunit;protein_id=HBQ7392443.1;transl_table=11 DAFVNP010000125.1 tpg gene 7140 8231 . - . ID=gene-L8R42_004424;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=L8R42_004424 DAFVNP010000125.1 Protein Homology CDS 7140 8231 . - 0 ID=cds-HBQ7392444.1;Parent=gene-L8R42_004424;Dbxref=NCBI_GP:HBQ7392444.1;Name=HBQ7392444.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=L8R42_004424;product=3-isopropylmalate dehydrogenase;protein_id=HBQ7392444.1;transl_table=11 DAFVNP010000125.1 tpg gene 8231 9802 . - . ID=gene-L8R42_004425;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=L8R42_004425 DAFVNP010000125.1 Protein Homology CDS 8231 9802 . - 0 ID=cds-HBQ7392445.1;Parent=gene-L8R42_004425;Dbxref=NCBI_GP:HBQ7392445.1;Name=HBQ7392445.1;gbkey=CDS;gene=leuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=L8R42_004425;product=2-isopropylmalate synthase;protein_id=HBQ7392445.1;transl_table=11 DAFVNP010000125.1 tpg gene 9890 9976 . - . ID=gene-L8R42_004426;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=L8R42_004426 DAFVNP010000125.1 Protein Homology CDS 9890 9976 . - 0 ID=cds-HBQ7392446.1;Parent=gene-L8R42_004426;Dbxref=NCBI_GP:HBQ7392446.1;Name=HBQ7392446.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=L8R42_004426;product=leu operon leader peptide;protein_id=HBQ7392446.1;transl_table=11 ##sequence-region DAFVNP010000126.1 1 9902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000126.1 tpg region 1 9902 . + . ID=DAFVNP010000126.1:1..9902;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000126.1 tpg gene 1 58 . - . ID=gene-L8R42_004427;Name=L8R42_004427;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004427 DAFVNP010000126.1 tRNAscan-SE tRNA 1 58 . - . ID=rna-L8R42_004427;Parent=gene-L8R42_004427;anticodon=(pos:complement(31..33));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004427;product=tRNA-Val DAFVNP010000126.1 tRNAscan-SE exon 1 58 . - . ID=exon-L8R42_004427-1;Parent=rna-L8R42_004427;anticodon=(pos:complement(31..33));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004427;product=tRNA-Val DAFVNP010000126.1 tpg gene 203 278 . - . ID=gene-L8R42_004428;Name=L8R42_004428;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004428 DAFVNP010000126.1 tRNAscan-SE tRNA 203 278 . - . ID=rna-L8R42_004428;Parent=gene-L8R42_004428;anticodon=(pos:complement(243..245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004428;product=tRNA-Lys DAFVNP010000126.1 tRNAscan-SE exon 203 278 . - . ID=exon-L8R42_004428-1;Parent=rna-L8R42_004428;anticodon=(pos:complement(243..245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004428;product=tRNA-Lys DAFVNP010000126.1 tpg gene 443 1231 . - . ID=gene-L8R42_004429;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=L8R42_004429 DAFVNP010000126.1 Protein Homology CDS 443 1231 . - 0 ID=cds-HBQ7392447.1;Parent=gene-L8R42_004429;Dbxref=NCBI_GP:HBQ7392447.1;Name=HBQ7392447.1;gbkey=CDS;gene=cpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=L8R42_004429;product=cell division protein CpoB;protein_id=HBQ7392447.1;transl_table=11 DAFVNP010000126.1 tpg gene 1241 1765 . - . ID=gene-L8R42_004430;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=L8R42_004430 DAFVNP010000126.1 Protein Homology CDS 1241 1765 . - 0 ID=cds-HBQ7392448.1;Parent=gene-L8R42_004430;Dbxref=NCBI_GP:HBQ7392448.1;Name=HBQ7392448.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=L8R42_004430;product=peptidoglycan-associated lipoprotein Pal;protein_id=HBQ7392448.1;transl_table=11 DAFVNP010000126.1 tpg gene 1800 3092 . - . ID=gene-L8R42_004431;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=L8R42_004431 DAFVNP010000126.1 Protein Homology CDS 1800 3092 . - 0 ID=cds-HBQ7392449.1;Parent=gene-L8R42_004431;Dbxref=NCBI_GP:HBQ7392449.1;Name=HBQ7392449.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=L8R42_004431;product=Tol-Pal system protein TolB;protein_id=HBQ7392449.1;transl_table=11 DAFVNP010000126.1 tpg gene 3216 4394 . - . ID=gene-L8R42_004432;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=L8R42_004432 DAFVNP010000126.1 Protein Homology CDS 3216 4394 . - 0 ID=cds-HBQ7392450.1;Parent=gene-L8R42_004432;Dbxref=NCBI_GP:HBQ7392450.1;Name=HBQ7392450.1;gbkey=CDS;gene=tolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=L8R42_004432;product=cell envelope integrity protein TolA;protein_id=HBQ7392450.1;transl_table=11 DAFVNP010000126.1 tpg gene 4459 4887 . - . ID=gene-L8R42_004433;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=L8R42_004433 DAFVNP010000126.1 Protein Homology CDS 4459 4887 . - 0 ID=cds-HBQ7392451.1;Parent=gene-L8R42_004433;Dbxref=NCBI_GP:HBQ7392451.1;Name=HBQ7392451.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=L8R42_004433;product=colicin uptake protein TolR;protein_id=HBQ7392451.1;transl_table=11 DAFVNP010000126.1 tpg gene 4891 5583 . - . ID=gene-L8R42_004434;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=L8R42_004434 DAFVNP010000126.1 Protein Homology CDS 4891 5583 . - 0 ID=cds-HBQ7392452.1;Parent=gene-L8R42_004434;Dbxref=NCBI_GP:HBQ7392452.1;Name=HBQ7392452.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=L8R42_004434;product=Tol-Pal system protein TolQ;protein_id=HBQ7392452.1;transl_table=11 DAFVNP010000126.1 tpg gene 5580 5984 . - . ID=gene-L8R42_004435;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=L8R42_004435 DAFVNP010000126.1 Protein Homology CDS 5580 5984 . - 0 ID=cds-HBQ7392453.1;Parent=gene-L8R42_004435;Dbxref=NCBI_GP:HBQ7392453.1;Name=HBQ7392453.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=L8R42_004435;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=HBQ7392453.1;transl_table=11 DAFVNP010000126.1 tpg gene 6213 6506 . - . ID=gene-L8R42_004436;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=L8R42_004436 DAFVNP010000126.1 Protein Homology CDS 6213 6506 . - 0 ID=cds-HBQ7392454.1;Parent=gene-L8R42_004436;Dbxref=NCBI_GP:HBQ7392454.1;Name=HBQ7392454.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=L8R42_004436;product=cyd operon protein YbgE;protein_id=HBQ7392454.1;transl_table=11 DAFVNP010000126.1 tpg gene 6506 6619 . - . ID=gene-L8R42_004437;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=L8R42_004437 DAFVNP010000126.1 Protein Homology CDS 6506 6619 . - 0 ID=cds-HBQ7392455.1;Parent=gene-L8R42_004437;Dbxref=NCBI_GP:HBQ7392455.1;Name=HBQ7392455.1;gbkey=CDS;gene=cydX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=L8R42_004437;product=cytochrome bd-I oxidase subunit CydX;protein_id=HBQ7392455.1;transl_table=11 DAFVNP010000126.1 tpg gene 6634 7773 . - . ID=gene-L8R42_004438;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=L8R42_004438 DAFVNP010000126.1 Protein Homology CDS 6634 7773 . - 0 ID=cds-HBQ7392456.1;Parent=gene-L8R42_004438;Dbxref=NCBI_GP:HBQ7392456.1;Name=HBQ7392456.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=L8R42_004438;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HBQ7392456.1;transl_table=11 DAFVNP010000126.1 tpg gene 7789 9357 . - . ID=gene-L8R42_004439;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=L8R42_004439 DAFVNP010000126.1 Protein Homology CDS 7789 9357 . - 0 ID=cds-HBQ7392457.1;Parent=gene-L8R42_004439;Dbxref=NCBI_GP:HBQ7392457.1;Name=HBQ7392457.1;gbkey=CDS;gene=cydA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=L8R42_004439;product=cytochrome ubiquinol oxidase subunit I;protein_id=HBQ7392457.1;transl_table=11 ##sequence-region DAFVNP010000127.1 1 9825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000127.1 tpg region 1 9825 . + . ID=DAFVNP010000127.1:1..9825;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000127.1 tpg gene 1 125 . - . ID=gene-L8R42_004440;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=L8R42_004440;partial=true;start_range=.,1 DAFVNP010000127.1 Protein Homology CDS 1 125 . - 0 ID=cds-HBQ7392458.1;Parent=gene-L8R42_004440;Dbxref=NCBI_GP:HBQ7392458.1;Name=HBQ7392458.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308524.1;locus_tag=L8R42_004440;partial=true;product=long-chain acyl-CoA thioesterase FadM;protein_id=HBQ7392458.1;start_range=.,1;transl_table=11 DAFVNP010000127.1 tpg gene 229 603 . - . ID=gene-L8R42_004441;Name=L8R42_004441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004441 DAFVNP010000127.1 Protein Homology CDS 229 603 . - 0 ID=cds-HBQ7392459.1;Parent=gene-L8R42_004441;Dbxref=NCBI_GP:HBQ7392459.1;Name=HBQ7392459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=L8R42_004441;product=helix-hairpin-helix domain-containing protein;protein_id=HBQ7392459.1;transl_table=11 DAFVNP010000127.1 tpg gene 753 2624 . - . ID=gene-L8R42_004442;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=L8R42_004442 DAFVNP010000127.1 Protein Homology CDS 753 2624 . - 0 ID=cds-HBQ7392460.1;Parent=gene-L8R42_004442;Dbxref=NCBI_GP:HBQ7392460.1;Name=HBQ7392460.1;gbkey=CDS;gene=ppiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=L8R42_004442;product=peptidylprolyl isomerase;protein_id=HBQ7392460.1;transl_table=11 DAFVNP010000127.1 tpg gene 2915 3187 . - . ID=gene-L8R42_004443;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=L8R42_004443 DAFVNP010000127.1 Protein Homology CDS 2915 3187 . - 0 ID=cds-HBQ7392461.1;Parent=gene-L8R42_004443;Dbxref=NCBI_GP:HBQ7392461.1;Name=HBQ7392461.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=L8R42_004443;product=DNA-binding protein HU-beta;protein_id=HBQ7392461.1;transl_table=11 DAFVNP010000127.1 tpg gene 3396 5750 . - . ID=gene-L8R42_004444;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=L8R42_004444 DAFVNP010000127.1 Protein Homology CDS 3396 5750 . - 0 ID=cds-HBQ7392462.1;Parent=gene-L8R42_004444;Dbxref=NCBI_GP:HBQ7392462.1;Name=HBQ7392462.1;gbkey=CDS;gene=lon;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=L8R42_004444;product=endopeptidase La;protein_id=HBQ7392462.1;transl_table=11 DAFVNP010000127.1 tpg gene 5936 7207 . - . ID=gene-L8R42_004445;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=L8R42_004445 DAFVNP010000127.1 Protein Homology CDS 5936 7207 . - 0 ID=cds-HBQ7392463.1;Parent=gene-L8R42_004445;Dbxref=NCBI_GP:HBQ7392463.1;Name=HBQ7392463.1;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=L8R42_004445;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=HBQ7392463.1;transl_table=11 DAFVNP010000127.1 tpg gene 7459 8082 . - . ID=gene-L8R42_004446;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=L8R42_004446 DAFVNP010000127.1 Protein Homology CDS 7459 8082 . - 0 ID=cds-HBQ7392464.1;Parent=gene-L8R42_004446;Dbxref=NCBI_GP:HBQ7392464.1;Name=HBQ7392464.1;gbkey=CDS;gene=clpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=L8R42_004446;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=HBQ7392464.1;transl_table=11 DAFVNP010000127.1 tpg gene 8329 9627 . - . ID=gene-L8R42_004447;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=L8R42_004447 DAFVNP010000127.1 Protein Homology CDS 8329 9627 . - 0 ID=cds-HBQ7392465.1;Parent=gene-L8R42_004447;Dbxref=NCBI_GP:HBQ7392465.1;Name=HBQ7392465.1;gbkey=CDS;gene=tig;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=L8R42_004447;product=trigger factor;protein_id=HBQ7392465.1;transl_table=11 ##sequence-region DAFVNP010000128.1 1 9648 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000128.1 tpg region 1 9648 . + . ID=DAFVNP010000128.1:1..9648;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000128.1 tpg gene 291 518 . - . ID=gene-L8R42_004448;Name=L8R42_004448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004448 DAFVNP010000128.1 GeneMarkS-2+ CDS 291 518 . - 0 ID=cds-HBQ7392466.1;Parent=gene-L8R42_004448;Dbxref=NCBI_GP:HBQ7392466.1;Name=HBQ7392466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_004448;product=hypothetical protein;protein_id=HBQ7392466.1;transl_table=11 DAFVNP010000128.1 tpg gene 677 6274 . - . ID=gene-L8R42_004449;Name=L8R42_004449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004449 DAFVNP010000128.1 Protein Homology CDS 677 6274 . - 0 ID=cds-HBQ7392467.1;Parent=gene-L8R42_004449;Dbxref=NCBI_GP:HBQ7392467.1;Name=HBQ7392467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=L8R42_004449;product=hypothetical protein;protein_id=HBQ7392467.1;transl_table=11 DAFVNP010000128.1 tpg gene 6394 7359 . - . ID=gene-L8R42_004450;Name=L8R42_004450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004450 DAFVNP010000128.1 Protein Homology CDS 6394 7359 . - 0 ID=cds-HBQ7392468.1;Parent=gene-L8R42_004450;Dbxref=NCBI_GP:HBQ7392468.1;Name=HBQ7392468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=L8R42_004450;product=hypothetical protein;protein_id=HBQ7392468.1;transl_table=11 DAFVNP010000128.1 tpg gene 7417 9609 . - . ID=gene-L8R42_004451;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=L8R42_004451 DAFVNP010000128.1 Protein Homology CDS 7417 9609 . - 0 ID=cds-HBQ7392469.1;Parent=gene-L8R42_004451;Dbxref=NCBI_GP:HBQ7392469.1;Name=HBQ7392469.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=L8R42_004451;product=intimin-like inverse autotransporter SinH;protein_id=HBQ7392469.1;transl_table=11 ##sequence-region DAFVNP010000129.1 1 9494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000129.1 tpg region 1 9494 . + . ID=DAFVNP010000129.1:1..9494;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000129.1 tpg gene 180 1838 . + . ID=gene-L8R42_004452;Name=L8R42_004452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004452 DAFVNP010000129.1 Protein Homology CDS 180 1838 . + 0 ID=cds-HBQ7392470.1;Parent=gene-L8R42_004452;Dbxref=NCBI_GP:HBQ7392470.1;Name=HBQ7392470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=L8R42_004452;product=ATP-dependent endonuclease;protein_id=HBQ7392470.1;transl_table=11 DAFVNP010000129.1 tpg gene 1835 2785 . - . ID=gene-L8R42_004453;Name=L8R42_004453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004453 DAFVNP010000129.1 Protein Homology CDS 1835 2785 . - 0 ID=cds-HBQ7392471.1;Parent=gene-L8R42_004453;Dbxref=NCBI_GP:HBQ7392471.1;Name=HBQ7392471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=L8R42_004453;product=VirK/YbjX family protein;protein_id=HBQ7392471.1;transl_table=11 DAFVNP010000129.1 tpg gene 2931 4049 . + . ID=gene-L8R42_004454;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=L8R42_004454 DAFVNP010000129.1 Protein Homology CDS 2931 4049 . + 0 ID=cds-HBQ7392472.1;Parent=gene-L8R42_004454;Dbxref=NCBI_GP:HBQ7392472.1;Name=HBQ7392472.1;gbkey=CDS;gene=macA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=L8R42_004454;product=macrolide transporter subunit MacA;protein_id=HBQ7392472.1;transl_table=11 DAFVNP010000129.1 tpg gene 4046 5992 . + . ID=gene-L8R42_004455;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=L8R42_004455 DAFVNP010000129.1 Protein Homology CDS 4046 5992 . + 0 ID=cds-HBQ7392473.1;Parent=gene-L8R42_004455;Dbxref=NCBI_GP:HBQ7392473.1;Name=HBQ7392473.1;gbkey=CDS;gene=macB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=L8R42_004455;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=HBQ7392473.1;transl_table=11 DAFVNP010000129.1 tpg gene 6122 6343 . - . ID=gene-L8R42_004456;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=L8R42_004456 DAFVNP010000129.1 Protein Homology CDS 6122 6343 . - 0 ID=cds-HBQ7392474.1;Parent=gene-L8R42_004456;Dbxref=NCBI_GP:HBQ7392474.1;Name=HBQ7392474.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=L8R42_004456;product=cold shock-like protein CspD;protein_id=HBQ7392474.1;transl_table=11 DAFVNP010000129.1 tpg gene 6667 6987 . + . ID=gene-L8R42_004457;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=L8R42_004457 DAFVNP010000129.1 Protein Homology CDS 6667 6987 . + 0 ID=cds-HBQ7392475.1;Parent=gene-L8R42_004457;Dbxref=NCBI_GP:HBQ7392475.1;Name=HBQ7392475.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=L8R42_004457;product=ATP-dependent Clp protease adapter ClpS;protein_id=HBQ7392475.1;transl_table=11 DAFVNP010000129.1 tpg gene 7018 9294 . + . ID=gene-L8R42_004458;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=L8R42_004458 DAFVNP010000129.1 Protein Homology CDS 7018 9294 . + 0 ID=cds-HBQ7392476.1;Parent=gene-L8R42_004458;Dbxref=NCBI_GP:HBQ7392476.1;Name=HBQ7392476.1;gbkey=CDS;gene=clpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=L8R42_004458;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=HBQ7392476.1;transl_table=11 ##sequence-region DAFVNP010000130.1 1 9462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000130.1 tpg region 1 9462 . + . ID=DAFVNP010000130.1:1..9462;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000130.1 tpg gene 1 545 . - . ID=gene-L8R42_004459;Name=L8R42_004459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004459;partial=true;start_range=.,1 DAFVNP010000130.1 Protein Homology CDS 1 545 . - 0 ID=cds-HBQ7392477.1;Parent=gene-L8R42_004459;Dbxref=NCBI_GP:HBQ7392477.1;Name=HBQ7392477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=L8R42_004459;partial=true;product=metal-dependent hydrolase;protein_id=HBQ7392477.1;start_range=.,1;transl_table=11 DAFVNP010000130.1 tpg gene 673 885 . - . ID=gene-L8R42_004460;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=L8R42_004460 DAFVNP010000130.1 Protein Homology CDS 673 885 . - 0 ID=cds-HBQ7392478.1;Parent=gene-L8R42_004460;Dbxref=NCBI_GP:HBQ7392478.1;Name=HBQ7392478.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=L8R42_004460;product=ribosome-associated protein YbcJ;protein_id=HBQ7392478.1;transl_table=11 DAFVNP010000130.1 tpg gene 887 1753 . - . ID=gene-L8R42_004461;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=L8R42_004461 DAFVNP010000130.1 Protein Homology CDS 887 1753 . - 0 ID=cds-HBQ7392479.1;Parent=gene-L8R42_004461;Dbxref=NCBI_GP:HBQ7392479.1;Name=HBQ7392479.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=L8R42_004461;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=HBQ7392479.1;transl_table=11 DAFVNP010000130.1 tpg gene 2300 2857 . + . ID=gene-L8R42_004462;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=L8R42_004462 DAFVNP010000130.1 Protein Homology CDS 2300 2857 . + 0 ID=cds-HBQ7392480.1;Parent=gene-L8R42_004462;Dbxref=NCBI_GP:HBQ7392480.1;Name=HBQ7392480.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=L8R42_004462;product=type 1 fimbrial protein subunit FimA;protein_id=HBQ7392480.1;transl_table=11 DAFVNP010000130.1 tpg gene 2932 3465 . + . ID=gene-L8R42_004463;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=L8R42_004463 DAFVNP010000130.1 Protein Homology CDS 2932 3465 . + 0 ID=cds-HBQ7392481.1;Parent=gene-L8R42_004463;Dbxref=NCBI_GP:HBQ7392481.1;Name=HBQ7392481.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=L8R42_004463;product=type 1 fimbrial protein subunit FimI;protein_id=HBQ7392481.1;transl_table=11 DAFVNP010000130.1 tpg gene 3509 4201 . + . ID=gene-L8R42_004464;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=L8R42_004464 DAFVNP010000130.1 Protein Homology CDS 3509 4201 . + 0 ID=cds-HBQ7392482.1;Parent=gene-L8R42_004464;Dbxref=NCBI_GP:HBQ7392482.1;Name=HBQ7392482.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=L8R42_004464;product=type 1 fimbria chaperone FimC;protein_id=HBQ7392482.1;transl_table=11 DAFVNP010000130.1 tpg gene 4232 6844 . + . ID=gene-L8R42_004465;Name=L8R42_004465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004465 DAFVNP010000130.1 Protein Homology CDS 4232 6844 . + 0 ID=cds-HBQ7392483.1;Parent=gene-L8R42_004465;Dbxref=NCBI_GP:HBQ7392483.1;Name=HBQ7392483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=L8R42_004465;product=fimbrial biogenesis usher protein;protein_id=HBQ7392483.1;transl_table=11 DAFVNP010000130.1 tpg gene 6859 7866 . + . ID=gene-L8R42_004466;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=L8R42_004466 DAFVNP010000130.1 Protein Homology CDS 6859 7866 . + 0 ID=cds-HBQ7392484.1;Parent=gene-L8R42_004466;Dbxref=NCBI_GP:HBQ7392484.1;Name=HBQ7392484.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=L8R42_004466;product=type 1 fimbrin D-mannose specific adhesin FimH;protein_id=HBQ7392484.1;transl_table=11 DAFVNP010000130.1 tpg gene 7876 8394 . + . ID=gene-L8R42_004467;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=L8R42_004467 DAFVNP010000130.1 Protein Homology CDS 7876 8394 . + 0 ID=cds-HBQ7392485.1;Parent=gene-L8R42_004467;Dbxref=NCBI_GP:HBQ7392485.1;Name=HBQ7392485.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=L8R42_004467;product=fimbria assembly protein;protein_id=HBQ7392485.1;transl_table=11 DAFVNP010000130.1 tpg gene 8440 9072 . - . ID=gene-L8R42_004468;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=L8R42_004468 DAFVNP010000130.1 Protein Homology CDS 8440 9072 . - 0 ID=cds-HBQ7392486.1;Parent=gene-L8R42_004468;Dbxref=NCBI_GP:HBQ7392486.1;Name=HBQ7392486.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=L8R42_004468;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=HBQ7392486.1;transl_table=11 ##sequence-region DAFVNP010000131.1 1 9047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000131.1 tpg region 1 9047 . + . ID=DAFVNP010000131.1:1..9047;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000131.1 tpg gene 60 470 . - . ID=gene-L8R42_004469;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=L8R42_004469 DAFVNP010000131.1 Protein Homology CDS 60 470 . - 0 ID=cds-HBQ7392487.1;Parent=gene-L8R42_004469;Dbxref=NCBI_GP:HBQ7392487.1;Name=HBQ7392487.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=L8R42_004469;product=hydroxyisourate hydrolase;protein_id=HBQ7392487.1;transl_table=11 DAFVNP010000131.1 tpg gene 606 1286 . + . ID=gene-L8R42_004470;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=L8R42_004470 DAFVNP010000131.1 Protein Homology CDS 606 1286 . + 0 ID=cds-HBQ7392488.1;Parent=gene-L8R42_004470;Dbxref=NCBI_GP:HBQ7392488.1;Name=HBQ7392488.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=L8R42_004470;product=response regulator transcription factor HprR;protein_id=HBQ7392488.1;transl_table=11 DAFVNP010000131.1 tpg gene 1279 2643 . + . ID=gene-L8R42_004471;Name=L8R42_004471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004471 DAFVNP010000131.1 Protein Homology CDS 1279 2643 . + 0 ID=cds-HBQ7392489.1;Parent=gene-L8R42_004471;Dbxref=NCBI_GP:HBQ7392489.1;Name=HBQ7392489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=L8R42_004471;product=heavy metal sensor histidine kinase;protein_id=HBQ7392489.1;transl_table=11 DAFVNP010000131.1 tpg gene 2816 4285 . + . ID=gene-L8R42_004472;Name=L8R42_004472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004472 DAFVNP010000131.1 Protein Homology CDS 2816 4285 . + 0 ID=cds-HBQ7392490.1;Parent=gene-L8R42_004472;Dbxref=NCBI_GP:HBQ7392490.1;Name=HBQ7392490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=L8R42_004472;product=C69 family dipeptidase;protein_id=HBQ7392490.1;transl_table=11 DAFVNP010000131.1 tpg gene 4394 4504 . + . ID=gene-L8R42_004473;Name=L8R42_004473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004473 DAFVNP010000131.1 Protein Homology CDS 4394 4504 . + 0 ID=cds-HBQ7392491.1;Parent=gene-L8R42_004473;Dbxref=NCBI_GP:HBQ7392491.1;Name=HBQ7392491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=L8R42_004473;product=hypothetical protein;protein_id=HBQ7392491.1;transl_table=11 DAFVNP010000131.1 tpg gene 4505 4675 . - . ID=gene-L8R42_004474;Name=L8R42_004474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004474 DAFVNP010000131.1 Protein Homology CDS 4505 4675 . - 0 ID=cds-HBQ7392492.1;Parent=gene-L8R42_004474;Dbxref=NCBI_GP:HBQ7392492.1;Name=HBQ7392492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=L8R42_004474;product=YlcI/YnfO family protein;protein_id=HBQ7392492.1;transl_table=11 DAFVNP010000131.1 tpg gene 5007 6692 . + . ID=gene-L8R42_004475;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=L8R42_004475 DAFVNP010000131.1 Protein Homology CDS 5007 6692 . + 0 ID=cds-HBQ7392493.1;Parent=gene-L8R42_004475;Dbxref=NCBI_GP:HBQ7392493.1;Name=HBQ7392493.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=L8R42_004475;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=HBQ7392493.1;transl_table=11 DAFVNP010000131.1 tpg gene 6709 7050 . + . ID=gene-L8R42_004476;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=L8R42_004476 DAFVNP010000131.1 Protein Homology CDS 6709 7050 . + 0 ID=cds-HBQ7392494.1;Parent=gene-L8R42_004476;Dbxref=NCBI_GP:HBQ7392494.1;Name=HBQ7392494.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=L8R42_004476;product=type III secretion system chaperone SigE;protein_id=HBQ7392494.1;transl_table=11 DAFVNP010000131.1 tpg gene 7415 7639 . + . ID=gene-L8R42_004477;Name=L8R42_004477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004477 DAFVNP010000131.1 Protein Homology CDS 7415 7639 . + 0 ID=cds-HBQ7392495.1;Parent=gene-L8R42_004477;Dbxref=NCBI_GP:HBQ7392495.1;Name=HBQ7392495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.1;locus_tag=L8R42_004477;product=hypothetical protein;protein_id=HBQ7392495.1;transl_table=11 DAFVNP010000131.1 tpg gene 8029 8904 . + . ID=gene-L8R42_004478;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=L8R42_004478 DAFVNP010000131.1 Protein Homology CDS 8029 8904 . + 0 ID=cds-HBQ7392496.1;Parent=gene-L8R42_004478;Dbxref=NCBI_GP:HBQ7392496.1;Name=HBQ7392496.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=L8R42_004478;product=SPI-2 type III secretion system effector PipB;protein_id=HBQ7392496.1;transl_table=11 ##sequence-region DAFVNP010000132.1 1 8815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000132.1 tpg region 1 8815 . + . ID=DAFVNP010000132.1:1..8815;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000132.1 tpg gene 22 1170 . + . ID=gene-L8R42_004479;Name=L8R42_004479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004479 DAFVNP010000132.1 Protein Homology CDS 22 1170 . + 0 ID=cds-HBQ7392497.1;Parent=gene-L8R42_004479;Dbxref=NCBI_GP:HBQ7392497.1;Name=HBQ7392497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=L8R42_004479;product=MFS transporter;protein_id=HBQ7392497.1;transl_table=11 DAFVNP010000132.1 tpg gene 1388 2809 . + . ID=gene-L8R42_004480;Name=L8R42_004480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004480 DAFVNP010000132.1 Protein Homology CDS 1388 2809 . + 0 ID=cds-HBQ7392498.1;Parent=gene-L8R42_004480;Dbxref=NCBI_GP:HBQ7392498.1;Name=HBQ7392498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=L8R42_004480;product=amino acid permease;protein_id=HBQ7392498.1;transl_table=11 DAFVNP010000132.1 tpg gene 3102 3878 . - . ID=gene-L8R42_004481;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=L8R42_004481 DAFVNP010000132.1 Protein Homology CDS 3102 3878 . - 0 ID=cds-HBQ7392499.1;Parent=gene-L8R42_004481;Dbxref=NCBI_GP:HBQ7392499.1;Name=HBQ7392499.1;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=L8R42_004481;product=pyruvate formate lyase 1-activating protein;protein_id=HBQ7392499.1;transl_table=11 DAFVNP010000132.1 tpg gene 4486 5439 . + . ID=gene-L8R42_004482;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=L8R42_004482 DAFVNP010000132.1 Protein Homology CDS 4486 5439 . + 0 ID=cds-HBQ7392500.1;Parent=gene-L8R42_004482;Dbxref=NCBI_GP:HBQ7392500.1;Name=HBQ7392500.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145561.1;locus_tag=L8R42_004482;product=type III secretion system effector SopD2;protein_id=HBQ7392500.1;transl_table=11 DAFVNP010000132.1 tpg gene 5511 7793 . - . ID=gene-L8R42_004483;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=L8R42_004483 DAFVNP010000132.1 Protein Homology CDS 5511 7793 . - 0 ID=cds-HBQ7392501.1;Parent=gene-L8R42_004483;Dbxref=NCBI_GP:HBQ7392501.1;Name=HBQ7392501.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=L8R42_004483;product=formate C-acetyltransferase;protein_id=HBQ7392501.1;transl_table=11 DAFVNP010000132.1 tpg gene 7853 8710 . - . ID=gene-L8R42_004484;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=L8R42_004484 DAFVNP010000132.1 Protein Homology CDS 7853 8710 . - 0 ID=cds-HBQ7392502.1;Parent=gene-L8R42_004484;Dbxref=NCBI_GP:HBQ7392502.1;Name=HBQ7392502.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=L8R42_004484;product=formate transporter FocA;protein_id=HBQ7392502.1;transl_table=11 ##sequence-region DAFVNP010000133.1 1 8711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000133.1 tpg region 1 8711 . + . ID=DAFVNP010000133.1:1..8711;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000133.1 tpg gene 1 337 . + . ID=gene-L8R42_004485;Name=L8R42_004485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004485;partial=true;start_range=.,1 DAFVNP010000133.1 Protein Homology CDS 1 337 . + 1 ID=cds-HBQ7392503.1;Parent=gene-L8R42_004485;Dbxref=NCBI_GP:HBQ7392503.1;Name=HBQ7392503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=L8R42_004485;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7392503.1;start_range=.,1;transl_table=11 DAFVNP010000133.1 tpg gene 413 1564 . - . ID=gene-L8R42_004486;Name=L8R42_004486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004486 DAFVNP010000133.1 Protein Homology CDS 413 1564 . - 0 ID=cds-HBQ7392504.1;Parent=gene-L8R42_004486;Dbxref=NCBI_GP:HBQ7392504.1;Name=HBQ7392504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=L8R42_004486;product=acyl-CoA dehydrogenase;protein_id=HBQ7392504.1;transl_table=11 DAFVNP010000133.1 tpg gene 1578 3173 . - . ID=gene-L8R42_004487;Name=L8R42_004487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004487 DAFVNP010000133.1 Protein Homology CDS 1578 3173 . - 0 ID=cds-HBQ7392505.1;Parent=gene-L8R42_004487;Dbxref=NCBI_GP:HBQ7392505.1;Name=HBQ7392505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=L8R42_004487;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=HBQ7392505.1;transl_table=11 DAFVNP010000133.1 tpg gene 3327 4085 . - . ID=gene-L8R42_004488;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=L8R42_004488 DAFVNP010000133.1 Protein Homology CDS 3327 4085 . - 0 ID=cds-HBQ7392506.1;Parent=gene-L8R42_004488;Dbxref=NCBI_GP:HBQ7392506.1;Name=HBQ7392506.1;gbkey=CDS;gene=aroD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=L8R42_004488;product=type I 3-dehydroquinate dehydratase;protein_id=HBQ7392506.1;transl_table=11 DAFVNP010000133.1 tpg gene 4130 4996 . - . ID=gene-L8R42_004489;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=L8R42_004489 DAFVNP010000133.1 Protein Homology CDS 4130 4996 . - 0 ID=cds-HBQ7392507.1;Parent=gene-L8R42_004489;Dbxref=NCBI_GP:HBQ7392507.1;Name=HBQ7392507.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=L8R42_004489;product=quinate/shikimate dehydrogenase;protein_id=HBQ7392507.1;transl_table=11 DAFVNP010000133.1 tpg gene 5063 6298 . - . ID=gene-L8R42_004490;Name=L8R42_004490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004490 DAFVNP010000133.1 Protein Homology CDS 5063 6298 . - 0 ID=cds-HBQ7392508.1;Parent=gene-L8R42_004490;Dbxref=NCBI_GP:HBQ7392508.1;Name=HBQ7392508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=L8R42_004490;product=MFS transporter;protein_id=HBQ7392508.1;transl_table=11 DAFVNP010000133.1 tpg gene 6662 7873 . - . ID=gene-L8R42_004491;Name=L8R42_004491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004491 DAFVNP010000133.1 Protein Homology CDS 6662 7873 . - 0 ID=cds-HBQ7392509.1;Parent=gene-L8R42_004491;Dbxref=NCBI_GP:HBQ7392509.1;Name=HBQ7392509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=L8R42_004491;product=MFS transporter;protein_id=HBQ7392509.1;transl_table=11 DAFVNP010000133.1 tpg gene 8014 8373 . - . ID=gene-L8R42_004492;Name=L8R42_004492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004492 DAFVNP010000133.1 Protein Homology CDS 8014 8373 . - 0 ID=cds-HBQ7392510.1;Parent=gene-L8R42_004492;Dbxref=NCBI_GP:HBQ7392510.1;Name=HBQ7392510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=L8R42_004492;product=YdiL family protein;protein_id=HBQ7392510.1;transl_table=11 DAFVNP010000133.1 tpg gene 8541 8648 . - . ID=gene-L8R42_004493;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=L8R42_004493 DAFVNP010000133.1 cmsearch antisense_RNA 8541 8648 . - . ID=rna-L8R42_004493;Parent=gene-L8R42_004493;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004493;product=antisense sRNA RprA DAFVNP010000133.1 cmsearch exon 8541 8648 . - . ID=exon-L8R42_004493-1;Parent=rna-L8R42_004493;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004493;product=antisense sRNA RprA ##sequence-region DAFVNP010000134.1 1 7625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000134.1 tpg region 1 7625 . + . ID=DAFVNP010000134.1:1..7625;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000134.1 tpg gene 1 743 . + . ID=gene-L8R42_004494;Name=L8R42_004494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004494;partial=true;start_range=.,1 DAFVNP010000134.1 Protein Homology CDS 1 743 . + 2 ID=cds-HBQ7392511.1;Parent=gene-L8R42_004494;Dbxref=NCBI_GP:HBQ7392511.1;Name=HBQ7392511.1;Note=FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=L8R42_004494;partial=true;product=FAD-dependent oxidoreductase;protein_id=HBQ7392511.1;start_range=.,1;transl_table=11 DAFVNP010000134.1 tpg gene 740 1033 . + . ID=gene-L8R42_004495;Name=L8R42_004495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004495 DAFVNP010000134.1 Protein Homology CDS 740 1033 . + 0 ID=cds-HBQ7392512.1;Parent=gene-L8R42_004495;Dbxref=NCBI_GP:HBQ7392512.1;Name=HBQ7392512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=L8R42_004495;product=ferredoxin family protein;protein_id=HBQ7392512.1;transl_table=11 DAFVNP010000134.1 tpg gene 1123 2763 . + . ID=gene-L8R42_004496;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=L8R42_004496 DAFVNP010000134.1 Protein Homology CDS 1123 2763 . + 0 ID=cds-HBQ7392513.1;Parent=gene-L8R42_004496;Dbxref=NCBI_GP:HBQ7392513.1;Name=HBQ7392513.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=L8R42_004496;product=medium-chain fatty-acid--CoA ligase;protein_id=HBQ7392513.1;transl_table=11 DAFVNP010000134.1 tpg gene 2805 5183 . - . ID=gene-L8R42_004497;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=L8R42_004497 DAFVNP010000134.1 Protein Homology CDS 2805 5183 . - 0 ID=cds-HBQ7392514.1;Parent=gene-L8R42_004497;Dbxref=NCBI_GP:HBQ7392514.1;Name=HBQ7392514.1;gbkey=CDS;gene=ppsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=L8R42_004497;product=phosphoenolpyruvate synthase;protein_id=HBQ7392514.1;transl_table=11 DAFVNP010000134.1 tpg gene 5520 6353 . + . ID=gene-L8R42_004498;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=L8R42_004498 DAFVNP010000134.1 Protein Homology CDS 5520 6353 . + 0 ID=cds-HBQ7392515.1;Parent=gene-L8R42_004498;Dbxref=NCBI_GP:HBQ7392515.1;Name=HBQ7392515.1;gbkey=CDS;gene=ppsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=L8R42_004498;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=HBQ7392515.1;transl_table=11 DAFVNP010000134.1 tpg gene 6509 7555 . + . ID=gene-L8R42_004499;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=L8R42_004499 DAFVNP010000134.1 Protein Homology CDS 6509 7555 . + 0 ID=cds-HBQ7392516.1;Parent=gene-L8R42_004499;Dbxref=NCBI_GP:HBQ7392516.1;Name=HBQ7392516.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=L8R42_004499;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=HBQ7392516.1;transl_table=11 ##sequence-region DAFVNP010000135.1 1 7547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000135.1 tpg region 1 7547 . + . ID=DAFVNP010000135.1:1..7547;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000135.1 tpg gene 1 1155 . + . ID=gene-L8R42_004500;Name=L8R42_004500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004500;partial=true;start_range=.,1 DAFVNP010000135.1 Protein Homology CDS 1 1155 . + 0 ID=cds-HBQ7392517.1;Parent=gene-L8R42_004500;Dbxref=NCBI_GP:HBQ7392517.1;Name=HBQ7392517.1;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=L8R42_004500;partial=true;product=flagellin FliC;protein_id=HBQ7392517.1;start_range=.,1;transl_table=11 DAFVNP010000135.1 tpg gene 1234 2439 . + . ID=gene-L8R42_004501;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=L8R42_004501 DAFVNP010000135.1 Protein Homology CDS 1234 2439 . + 0 ID=cds-HBQ7392518.1;Parent=gene-L8R42_004501;Dbxref=NCBI_GP:HBQ7392518.1;Name=HBQ7392518.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=L8R42_004501;product=flagellin lysine-N-methylase;protein_id=HBQ7392518.1;transl_table=11 DAFVNP010000135.1 tpg gene 2636 3355 . + . ID=gene-L8R42_004502;Name=L8R42_004502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004502 DAFVNP010000135.1 Protein Homology CDS 2636 3355 . + 0 ID=cds-HBQ7392519.1;Parent=gene-L8R42_004502;Dbxref=NCBI_GP:HBQ7392519.1;Name=HBQ7392519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=L8R42_004502;product=RNA polymerase sigma factor FliA;protein_id=HBQ7392519.1;transl_table=11 DAFVNP010000135.1 tpg gene 3414 3965 . + . ID=gene-L8R42_004503;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=L8R42_004503 DAFVNP010000135.1 Protein Homology CDS 3414 3965 . + 0 ID=cds-HBQ7392520.1;Parent=gene-L8R42_004503;Dbxref=NCBI_GP:HBQ7392520.1;Name=HBQ7392520.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=L8R42_004503;product=flagella biosynthesis regulatory protein FliZ;protein_id=HBQ7392520.1;transl_table=11 DAFVNP010000135.1 tpg gene 4112 4912 . + . ID=gene-L8R42_004504;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=L8R42_004504 DAFVNP010000135.1 Protein Homology CDS 4112 4912 . + 0 ID=cds-HBQ7392521.1;Parent=gene-L8R42_004504;Dbxref=NCBI_GP:HBQ7392521.1;Name=HBQ7392521.1;gbkey=CDS;gene=tcyJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=L8R42_004504;product=cystine ABC transporter substrate-binding protein;protein_id=HBQ7392521.1;transl_table=11 DAFVNP010000135.1 tpg gene 5066 6052 . + . ID=gene-L8R42_004505;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=L8R42_004505 DAFVNP010000135.1 Protein Homology CDS 5066 6052 . + 0 ID=cds-HBQ7392522.1;Parent=gene-L8R42_004505;Dbxref=NCBI_GP:HBQ7392522.1;Name=HBQ7392522.1;gbkey=CDS;gene=dcyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=L8R42_004505;product=D-cysteine desulfhydrase;protein_id=HBQ7392522.1;transl_table=11 DAFVNP010000135.1 tpg gene 6073 6741 . + . ID=gene-L8R42_004506;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=L8R42_004506 DAFVNP010000135.1 Protein Homology CDS 6073 6741 . + 0 ID=cds-HBQ7392523.1;Parent=gene-L8R42_004506;Dbxref=NCBI_GP:HBQ7392523.1;Name=HBQ7392523.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=L8R42_004506;product=cystine ABC transporter permease;protein_id=HBQ7392523.1;transl_table=11 DAFVNP010000135.1 tpg gene 6738 7490 . + . ID=gene-L8R42_004507;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=L8R42_004507 DAFVNP010000135.1 Protein Homology CDS 6738 7490 . + 0 ID=cds-HBQ7392524.1;Parent=gene-L8R42_004507;Dbxref=NCBI_GP:HBQ7392524.1;Name=HBQ7392524.1;gbkey=CDS;gene=yecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=L8R42_004507;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=HBQ7392524.1;transl_table=11 ##sequence-region DAFVNP010000136.1 1 7481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000136.1 tpg region 1 7481 . + . ID=DAFVNP010000136.1:1..7481;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000136.1 tpg gene 106 387 . - . ID=gene-L8R42_004508;Name=L8R42_004508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004508 DAFVNP010000136.1 Protein Homology CDS 106 387 . - 0 ID=cds-HBQ7392525.1;Parent=gene-L8R42_004508;Dbxref=NCBI_GP:HBQ7392525.1;Name=HBQ7392525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000077926.1;locus_tag=L8R42_004508;product=hypothetical protein;protein_id=HBQ7392525.1;transl_table=11 DAFVNP010000136.1 tpg gene 437 628 . - . ID=gene-L8R42_004509;Name=L8R42_004509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004509 DAFVNP010000136.1 Protein Homology CDS 437 628 . - 0 ID=cds-HBQ7392526.1;Parent=gene-L8R42_004509;Dbxref=NCBI_GP:HBQ7392526.1;Name=HBQ7392526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786869.1;locus_tag=L8R42_004509;product=hypothetical protein;protein_id=HBQ7392526.1;transl_table=11 DAFVNP010000136.1 tpg gene 720 1061 . - . ID=gene-L8R42_004510;Name=L8R42_004510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004510 DAFVNP010000136.1 Protein Homology CDS 720 1061 . - 0 ID=cds-HBQ7392527.1;Parent=gene-L8R42_004510;Dbxref=NCBI_GP:HBQ7392527.1;Name=HBQ7392527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151572.1;locus_tag=L8R42_004510;product=hypothetical protein;protein_id=HBQ7392527.1;transl_table=11 DAFVNP010000136.1 tpg gene 1434 1826 . + . ID=gene-L8R42_004511;Name=L8R42_004511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004511 DAFVNP010000136.1 Protein Homology CDS 1434 1826 . + 0 ID=cds-HBQ7392528.1;Parent=gene-L8R42_004511;Dbxref=NCBI_GP:HBQ7392528.1;Name=HBQ7392528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000341068.1;locus_tag=L8R42_004511;product=hypothetical protein;protein_id=HBQ7392528.1;transl_table=11 DAFVNP010000136.1 tpg gene 2430 2723 . + . ID=gene-L8R42_004512;Name=L8R42_004512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004512 DAFVNP010000136.1 Protein Homology CDS 2430 2723 . + 0 ID=cds-HBQ7392529.1;Parent=gene-L8R42_004512;Dbxref=NCBI_GP:HBQ7392529.1;Name=HBQ7392529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925195.1;locus_tag=L8R42_004512;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7392529.1;transl_table=11 DAFVNP010000136.1 tpg gene 2728 4053 . + . ID=gene-L8R42_004513;Name=L8R42_004513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004513 DAFVNP010000136.1 Protein Homology CDS 2728 4053 . + 0 ID=cds-HBQ7392530.1;Parent=gene-L8R42_004513;Dbxref=NCBI_GP:HBQ7392530.1;Name=HBQ7392530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088046.1;locus_tag=L8R42_004513;product=type II toxin-antitoxin system HipA family toxin;protein_id=HBQ7392530.1;transl_table=11 DAFVNP010000136.1 tpg gene 4114 4320 . + . ID=gene-L8R42_004514;Name=L8R42_004514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004514 DAFVNP010000136.1 Protein Homology CDS 4114 4320 . + 0 ID=cds-HBQ7392531.1;Parent=gene-L8R42_004514;Dbxref=NCBI_GP:HBQ7392531.1;Name=HBQ7392531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134171.1;locus_tag=L8R42_004514;product=hypothetical protein;protein_id=HBQ7392531.1;transl_table=11 DAFVNP010000136.1 tpg gene 4422 4712 . + . ID=gene-L8R42_004515;Name=L8R42_004515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004515 DAFVNP010000136.1 Protein Homology CDS 4422 4712 . + 0 ID=cds-HBQ7392532.1;Parent=gene-L8R42_004515;Dbxref=NCBI_GP:HBQ7392532.1;Name=HBQ7392532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985910.1;locus_tag=L8R42_004515;product=hypothetical protein;protein_id=HBQ7392532.1;transl_table=11 DAFVNP010000136.1 tpg gene 4754 5590 . - . ID=gene-L8R42_004516;Name=L8R42_004516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004516 DAFVNP010000136.1 Protein Homology CDS 4754 5590 . - 0 ID=cds-HBQ7392533.1;Parent=gene-L8R42_004516;Dbxref=NCBI_GP:HBQ7392533.1;Name=HBQ7392533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=L8R42_004516;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=HBQ7392533.1;transl_table=11 DAFVNP010000136.1 tpg gene 5590 6393 . - . ID=gene-L8R42_004517;Name=L8R42_004517;Note=aph(3'')-Ib;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004517 DAFVNP010000136.1 Protein Homology CDS 5590 6393 . - 0 ID=cds-HBQ7392534.1;Parent=gene-L8R42_004517;Dbxref=NCBI_GP:HBQ7392534.1;Name=HBQ7392534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=L8R42_004517;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=HBQ7392534.1;transl_table=11 DAFVNP010000136.1 tpg pseudogene 6500 7431 . - . ID=gene-L8R42_004518;Name=L8R42_004518;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004518;pseudo=true DAFVNP010000136.1 Protein Homology CDS 6500 7431 . - 0 ID=cds-L8R42_004518;Parent=gene-L8R42_004518;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611355.1;locus_tag=L8R42_004518;product=IS3-like element IS1133 family transposase;pseudo=true;transl_table=11 ##sequence-region DAFVNP010000137.1 1 7469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000137.1 tpg region 1 7469 . + . ID=DAFVNP010000137.1:1..7469;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000137.1 tpg gene 32 1321 . - . ID=gene-L8R42_004519;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=L8R42_004519 DAFVNP010000137.1 Protein Homology CDS 32 1321 . - 0 ID=cds-HBQ7392535.1;Parent=gene-L8R42_004519;Dbxref=NCBI_GP:HBQ7392535.1;Name=HBQ7392535.1;gbkey=CDS;gene=rsmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=L8R42_004519;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=HBQ7392535.1;transl_table=11 DAFVNP010000137.1 tpg gene 1373 2320 . - . ID=gene-L8R42_004520;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=L8R42_004520 DAFVNP010000137.1 Protein Homology CDS 1373 2320 . - 0 ID=cds-HBQ7392536.1;Parent=gene-L8R42_004520;Dbxref=NCBI_GP:HBQ7392536.1;Name=HBQ7392536.1;gbkey=CDS;gene=fmt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=L8R42_004520;product=methionyl-tRNA formyltransferase;protein_id=HBQ7392536.1;transl_table=11 DAFVNP010000137.1 tpg gene 2336 2845 . - . ID=gene-L8R42_004521;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=L8R42_004521 DAFVNP010000137.1 Protein Homology CDS 2336 2845 . - 0 ID=cds-HBQ7392537.1;Parent=gene-L8R42_004521;Dbxref=NCBI_GP:HBQ7392537.1;Name=HBQ7392537.1;gbkey=CDS;gene=def;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=L8R42_004521;product=peptide deformylase;protein_id=HBQ7392537.1;transl_table=11 DAFVNP010000137.1 tpg gene 2977 4101 . + . ID=gene-L8R42_004522;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=L8R42_004522 DAFVNP010000137.1 Protein Homology CDS 2977 4101 . + 0 ID=cds-HBQ7392538.1;Parent=gene-L8R42_004522;Dbxref=NCBI_GP:HBQ7392538.1;Name=HBQ7392538.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=L8R42_004522;product=DNA-protecting protein DprA;protein_id=HBQ7392538.1;transl_table=11 DAFVNP010000137.1 tpg gene 4073 4546 . + . ID=gene-L8R42_004523;Name=L8R42_004523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004523 DAFVNP010000137.1 Protein Homology CDS 4073 4546 . + 0 ID=cds-HBQ7392539.1;Parent=gene-L8R42_004523;Dbxref=NCBI_GP:HBQ7392539.1;Name=HBQ7392539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=L8R42_004523;product=DUF494 domain-containing protein;protein_id=HBQ7392539.1;transl_table=11 DAFVNP010000137.1 tpg gene 4573 5115 . + . ID=gene-L8R42_004524;Name=L8R42_004524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004524 DAFVNP010000137.1 Protein Homology CDS 4573 5115 . + 0 ID=cds-HBQ7392540.1;Parent=gene-L8R42_004524;Dbxref=NCBI_GP:HBQ7392540.1;Name=HBQ7392540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=L8R42_004524;product=DNA topoisomerase;protein_id=HBQ7392540.1;transl_table=11 DAFVNP010000137.1 tpg gene 5120 5692 . + . ID=gene-L8R42_004525;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=L8R42_004525 DAFVNP010000137.1 Protein Homology CDS 5120 5692 . + 0 ID=cds-HBQ7392541.1;Parent=gene-L8R42_004525;Dbxref=NCBI_GP:HBQ7392541.1;Name=HBQ7392541.1;gbkey=CDS;gene=tsaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=L8R42_004525;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=HBQ7392541.1;transl_table=11 DAFVNP010000137.1 tpg gene 5697 6515 . + . ID=gene-L8R42_004526;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=L8R42_004526 DAFVNP010000137.1 Protein Homology CDS 5697 6515 . + 0 ID=cds-HBQ7392542.1;Parent=gene-L8R42_004526;Dbxref=NCBI_GP:HBQ7392542.1;Name=HBQ7392542.1;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=L8R42_004526;product=shikimate dehydrogenase;protein_id=HBQ7392542.1;transl_table=11 DAFVNP010000137.1 tpg gene 6512 6769 . + . ID=gene-L8R42_004527;Name=L8R42_004527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004527 DAFVNP010000137.1 Protein Homology CDS 6512 6769 . + 0 ID=cds-HBQ7392543.1;Parent=gene-L8R42_004527;Dbxref=NCBI_GP:HBQ7392543.1;Name=HBQ7392543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=L8R42_004527;product=DUF1488 domain-containing protein;protein_id=HBQ7392543.1;transl_table=11 DAFVNP010000137.1 tpg gene 6745 7299 . - . ID=gene-L8R42_004528;Name=L8R42_004528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004528 DAFVNP010000137.1 Protein Homology CDS 6745 7299 . - 0 ID=cds-HBQ7392544.1;Parent=gene-L8R42_004528;Dbxref=NCBI_GP:HBQ7392544.1;Name=HBQ7392544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=L8R42_004528;product=gamma carbonic anhydrase family protein;protein_id=HBQ7392544.1;transl_table=11 ##sequence-region DAFVNP010000138.1 1 7432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000138.1 tpg region 1 7432 . + . ID=DAFVNP010000138.1:1..7432;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000138.1 tpg gene 1 1461 . + . ID=gene-L8R42_004529;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=L8R42_004529;partial=true;start_range=.,1 DAFVNP010000138.1 Protein Homology CDS 1 1461 . + 0 ID=cds-HBQ7392545.1;Parent=gene-L8R42_004529;Dbxref=NCBI_GP:HBQ7392545.1;Name=HBQ7392545.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=L8R42_004529;partial=true;product=cyclic di-GMP phosphodiesterase;protein_id=HBQ7392545.1;start_range=.,1;transl_table=11 DAFVNP010000138.1 tpg gene 1583 1762 . + . ID=gene-L8R42_004530;Name=L8R42_004530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004530 DAFVNP010000138.1 Protein Homology CDS 1583 1762 . + 0 ID=cds-HBQ7392546.1;Parent=gene-L8R42_004530;Dbxref=NCBI_GP:HBQ7392546.1;Name=HBQ7392546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=L8R42_004530;product=hypothetical protein;protein_id=HBQ7392546.1;transl_table=11 DAFVNP010000138.1 tpg gene 1849 2601 . + . ID=gene-L8R42_004531;Name=L8R42_004531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004531 DAFVNP010000138.1 Protein Homology CDS 1849 2601 . + 0 ID=cds-HBQ7392547.1;Parent=gene-L8R42_004531;Dbxref=NCBI_GP:HBQ7392547.1;Name=HBQ7392547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=L8R42_004531;product=DeoR/GlpR transcriptional regulator;protein_id=HBQ7392547.1;transl_table=11 DAFVNP010000138.1 tpg gene 2860 3078 . + . ID=gene-L8R42_004532;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=L8R42_004532 DAFVNP010000138.1 Protein Homology CDS 2860 3078 . + 0 ID=cds-HBQ7392548.1;Parent=gene-L8R42_004532;Dbxref=NCBI_GP:HBQ7392548.1;Name=HBQ7392548.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=L8R42_004532;product=osmotically-inducible lipoprotein OsmB;protein_id=HBQ7392548.1;transl_table=11 DAFVNP010000138.1 tpg gene 3198 3524 . - . ID=gene-L8R42_004533;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=L8R42_004533 DAFVNP010000138.1 Protein Homology CDS 3198 3524 . - 0 ID=cds-HBQ7392549.1;Parent=gene-L8R42_004533;Dbxref=NCBI_GP:HBQ7392549.1;Name=HBQ7392549.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=L8R42_004533;product=stress response translation initiation inhibitor YciH;protein_id=HBQ7392549.1;transl_table=11 DAFVNP010000138.1 tpg gene 3524 4261 . - . ID=gene-L8R42_004534;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=L8R42_004534 DAFVNP010000138.1 Protein Homology CDS 3524 4261 . - 0 ID=cds-HBQ7392550.1;Parent=gene-L8R42_004534;Dbxref=NCBI_GP:HBQ7392550.1;Name=HBQ7392550.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=L8R42_004534;product=orotidine-5'-phosphate decarboxylase;protein_id=HBQ7392550.1;transl_table=11 DAFVNP010000138.1 tpg gene 4452 5621 . - . ID=gene-L8R42_004535;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=L8R42_004535 DAFVNP010000138.1 Protein Homology CDS 4452 5621 . - 0 ID=cds-HBQ7392551.1;Parent=gene-L8R42_004535;Dbxref=NCBI_GP:HBQ7392551.1;Name=HBQ7392551.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=L8R42_004535;product=lipopolysaccharide assembly protein LapB;protein_id=HBQ7392551.1;transl_table=11 DAFVNP010000138.1 tpg gene 5628 5936 . - . ID=gene-L8R42_004536;Name=L8R42_004536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004536 DAFVNP010000138.1 Protein Homology CDS 5628 5936 . - 0 ID=cds-HBQ7392552.1;Parent=gene-L8R42_004536;Dbxref=NCBI_GP:HBQ7392552.1;Name=HBQ7392552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=L8R42_004536;product=LapA family protein;protein_id=HBQ7392552.1;transl_table=11 DAFVNP010000138.1 tpg gene 6086 6850 . - . ID=gene-L8R42_004537;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=L8R42_004537 DAFVNP010000138.1 Protein Homology CDS 6086 6850 . - 0 ID=cds-HBQ7392553.1;Parent=gene-L8R42_004537;Dbxref=NCBI_GP:HBQ7392553.1;Name=HBQ7392553.1;gbkey=CDS;gene=pgpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=L8R42_004537;product=phosphatidylglycerophosphatase B;protein_id=HBQ7392553.1;transl_table=11 DAFVNP010000138.1 tpg gene 7046 7432 . + . ID=gene-L8R42_004538;Name=L8R42_004538;end_range=7432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004538;partial=true DAFVNP010000138.1 Protein Homology CDS 7046 7432 . + 0 ID=cds-HBQ7392554.1;Parent=gene-L8R42_004538;Dbxref=NCBI_GP:HBQ7392554.1;Name=HBQ7392554.1;end_range=7432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=L8R42_004538;partial=true;product=GTP cyclohydrolase II;protein_id=HBQ7392554.1;transl_table=11 ##sequence-region DAFVNP010000139.1 1 7108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000139.1 tpg region 1 7108 . + . ID=DAFVNP010000139.1:1..7108;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000139.1 tpg gene 50 1099 . + . ID=gene-L8R42_004539;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=L8R42_004539 DAFVNP010000139.1 Protein Homology CDS 50 1099 . + 0 ID=cds-HBQ7392555.1;Parent=gene-L8R42_004539;Dbxref=NCBI_GP:HBQ7392555.1;Name=HBQ7392555.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=L8R42_004539;product=ureidoglycolate dehydrogenase;protein_id=HBQ7392555.1;transl_table=11 DAFVNP010000139.1 tpg gene 1121 2356 . + . ID=gene-L8R42_004540;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=L8R42_004540 DAFVNP010000139.1 Protein Homology CDS 1121 2356 . + 0 ID=cds-HBQ7392556.1;Parent=gene-L8R42_004540;Dbxref=NCBI_GP:HBQ7392556.1;Name=HBQ7392556.1;gbkey=CDS;gene=allC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=L8R42_004540;product=allantoate deiminase;protein_id=HBQ7392556.1;transl_table=11 DAFVNP010000139.1 tpg gene 2367 3152 . + . ID=gene-L8R42_004541;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=L8R42_004541 DAFVNP010000139.1 Protein Homology CDS 2367 3152 . + 0 ID=cds-HBQ7392557.1;Parent=gene-L8R42_004541;Dbxref=NCBI_GP:HBQ7392557.1;Name=HBQ7392557.1;gbkey=CDS;gene=allE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=L8R42_004541;product=(S)-ureidoglycine aminohydrolase;protein_id=HBQ7392557.1;transl_table=11 DAFVNP010000139.1 tpg gene 3231 4379 . - . ID=gene-L8R42_004542;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=L8R42_004542 DAFVNP010000139.1 Protein Homology CDS 3231 4379 . - 0 ID=cds-HBQ7392558.1;Parent=gene-L8R42_004542;Dbxref=NCBI_GP:HBQ7392558.1;Name=HBQ7392558.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=L8R42_004542;product=glycerate 3-kinase;protein_id=HBQ7392558.1;transl_table=11 DAFVNP010000139.1 tpg gene 4402 5700 . - . ID=gene-L8R42_004543;Name=L8R42_004543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004543 DAFVNP010000139.1 Protein Homology CDS 4402 5700 . - 0 ID=cds-HBQ7392559.1;Parent=gene-L8R42_004543;Dbxref=NCBI_GP:HBQ7392559.1;Name=HBQ7392559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=L8R42_004543;product=uracil/xanthine transporter;protein_id=HBQ7392559.1;transl_table=11 DAFVNP010000139.1 tpg gene 5759 7105 . - . ID=gene-L8R42_004544;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=L8R42_004544 DAFVNP010000139.1 Protein Homology CDS 5759 7105 . - 0 ID=cds-HBQ7392560.1;Parent=gene-L8R42_004544;Dbxref=NCBI_GP:HBQ7392560.1;Name=HBQ7392560.1;gbkey=CDS;gene=allB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020678514.1;locus_tag=L8R42_004544;product=allantoinase AllB;protein_id=HBQ7392560.1;transl_table=11 ##sequence-region DAFVNP010000140.1 1 6693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000140.1 tpg region 1 6693 . + . ID=DAFVNP010000140.1:1..6693;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000140.1 tpg gene 232 864 . + . ID=gene-L8R42_004545;Name=L8R42_004545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004545 DAFVNP010000140.1 Protein Homology CDS 232 864 . + 0 ID=cds-HBQ7392561.1;Parent=gene-L8R42_004545;Dbxref=NCBI_GP:HBQ7392561.1;Name=HBQ7392561.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013068.1;locus_tag=L8R42_004545;product=IS256 family transposase;protein_id=HBQ7392561.1;transl_table=11 DAFVNP010000140.1 tpg gene 1111 1443 . - . ID=gene-L8R42_004546;Name=qac;gbkey=Gene;gene=qac;gene_biotype=protein_coding;locus_tag=L8R42_004546 DAFVNP010000140.1 Protein Homology CDS 1111 1443 . - 0 ID=cds-HBQ7392562.1;Parent=gene-L8R42_004546;Dbxref=NCBI_GP:HBQ7392562.1;Name=HBQ7392562.1;gbkey=CDS;gene=qac;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015059047.1;locus_tag=L8R42_004546;product=quaternary ammonium compound efflux SMR transporter QacL;protein_id=HBQ7392562.1;transl_table=11 DAFVNP010000140.1 tpg gene 1613 2404 . - . ID=gene-L8R42_004547;Name=aadA1;gbkey=Gene;gene=aadA1;gene_biotype=protein_coding;locus_tag=L8R42_004547 DAFVNP010000140.1 Protein Homology CDS 1613 2404 . - 0 ID=cds-HBQ7392563.1;Parent=gene-L8R42_004547;Dbxref=NCBI_GP:HBQ7392563.1;Name=HBQ7392563.1;gbkey=CDS;gene=aadA1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014325834.1;locus_tag=L8R42_004547;product=ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1;protein_id=HBQ7392563.1;transl_table=11 DAFVNP010000140.1 tpg gene 2497 3756 . - . ID=gene-L8R42_004548;Name=L8R42_004548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004548 DAFVNP010000140.1 Protein Homology CDS 2497 3756 . - 0 ID=cds-HBQ7392564.1;Parent=gene-L8R42_004548;Dbxref=NCBI_GP:HBQ7392564.1;Name=HBQ7392564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001256773.1;locus_tag=L8R42_004548;product=chloramphenicol efflux MFS transporter CmlA1;protein_id=HBQ7392564.1;transl_table=11 DAFVNP010000140.1 tpg gene 4018 4809 . - . ID=gene-L8R42_004549;Name=L8R42_004549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004549 DAFVNP010000140.1 Protein Homology CDS 4018 4809 . - 0 ID=cds-HBQ7392565.1;Parent=gene-L8R42_004549;Dbxref=NCBI_GP:HBQ7392565.1;Name=HBQ7392565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014325834.1;locus_tag=L8R42_004549;product=ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2;protein_id=HBQ7392565.1;transl_table=11 DAFVNP010000140.1 tpg gene 4867 5475 . - . ID=gene-L8R42_004550;Name=L8R42_004550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004550 DAFVNP010000140.1 Protein Homology CDS 4867 5475 . - 0 ID=cds-HBQ7392566.1;Parent=gene-L8R42_004550;Dbxref=NCBI_GP:HBQ7392566.1;Name=HBQ7392566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050382.1;locus_tag=L8R42_004550;product=HAD-IB family hydrolase;protein_id=HBQ7392566.1;transl_table=11 DAFVNP010000140.1 tpg gene 5571 6413 . - . ID=gene-L8R42_004551;Name=estX;gbkey=Gene;gene=estX;gene_biotype=protein_coding;locus_tag=L8R42_004551 DAFVNP010000140.1 Protein Homology CDS 5571 6413 . - 0 ID=cds-HBQ7392567.1;Parent=gene-L8R42_004551;Dbxref=NCBI_GP:HBQ7392567.1;Name=HBQ7392567.1;gbkey=CDS;gene=estX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242844.1;locus_tag=L8R42_004551;product=alpha/beta fold putative hydrolase EstX;protein_id=HBQ7392567.1;transl_table=11 DAFVNP010000140.1 tpg gene 6580 6693 . + . ID=gene-L8R42_004552;Name=L8R42_004552;end_range=6693,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004552;partial=true DAFVNP010000140.1 Protein Homology CDS 6580 6693 . + 0 ID=cds-HBQ7392568.1;Parent=gene-L8R42_004552;Dbxref=NCBI_GP:HBQ7392568.1;Name=HBQ7392568.1;end_range=6693,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221021.1;locus_tag=L8R42_004552;partial=true;product=integrase;protein_id=HBQ7392568.1;transl_table=11 ##sequence-region DAFVNP010000141.1 1 6651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000141.1 tpg region 1 6651 . + . ID=DAFVNP010000141.1:1..6651;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000141.1 tpg gene 86 667 . + . ID=gene-L8R42_004553;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=L8R42_004553 DAFVNP010000141.1 Protein Homology CDS 86 667 . + 0 ID=cds-HBQ7392569.1;Parent=gene-L8R42_004553;Dbxref=NCBI_GP:HBQ7392569.1;Name=HBQ7392569.1;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=L8R42_004553;product=superoxide dismutase [Fe];protein_id=HBQ7392569.1;transl_table=11 DAFVNP010000141.1 tpg gene 750 839 . - . ID=gene-L8R42_004554;Name=L8R42_004554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004554 DAFVNP010000141.1 Protein Homology CDS 750 839 . - 0 ID=cds-HBQ7392570.1;Parent=gene-L8R42_004554;Dbxref=NCBI_GP:HBQ7392570.1;Name=HBQ7392570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=L8R42_004554;product=YnhF family membrane protein;protein_id=HBQ7392570.1;transl_table=11 DAFVNP010000141.1 tpg gene 1135 2160 . + . ID=gene-L8R42_004555;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=L8R42_004555 DAFVNP010000141.1 Protein Homology CDS 1135 2160 . + 0 ID=cds-HBQ7392571.1;Parent=gene-L8R42_004555;Dbxref=NCBI_GP:HBQ7392571.1;Name=HBQ7392571.1;gbkey=CDS;gene=purR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=L8R42_004555;product=HTH-type transcriptional repressor PurR;protein_id=HBQ7392571.1;transl_table=11 DAFVNP010000141.1 tpg gene 2157 3089 . - . ID=gene-L8R42_004556;Name=L8R42_004556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004556 DAFVNP010000141.1 Protein Homology CDS 2157 3089 . - 0 ID=cds-HBQ7392572.1;Parent=gene-L8R42_004556;Dbxref=NCBI_GP:HBQ7392572.1;Name=HBQ7392572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=L8R42_004556;product=LysR family transcriptional regulator;protein_id=HBQ7392572.1;transl_table=11 DAFVNP010000141.1 tpg gene 3202 4407 . + . ID=gene-L8R42_004557;Name=L8R42_004557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004557 DAFVNP010000141.1 Protein Homology CDS 3202 4407 . + 0 ID=cds-HBQ7392573.1;Parent=gene-L8R42_004557;Dbxref=NCBI_GP:HBQ7392573.1;Name=HBQ7392573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=L8R42_004557;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=HBQ7392573.1;transl_table=11 DAFVNP010000141.1 tpg gene 4697 5845 . + . ID=gene-L8R42_004558;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=L8R42_004558 DAFVNP010000141.1 Protein Homology CDS 4697 5845 . + 0 ID=cds-HBQ7392574.1;Parent=gene-L8R42_004558;Dbxref=NCBI_GP:HBQ7392574.1;Name=HBQ7392574.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=L8R42_004558;product=cyclopropane fatty acyl phospholipid synthase;protein_id=HBQ7392574.1;transl_table=11 DAFVNP010000141.1 tpg gene 5887 6528 . - . ID=gene-L8R42_004559;Name=L8R42_004559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004559 DAFVNP010000141.1 Protein Homology CDS 5887 6528 . - 0 ID=cds-HBQ7392575.1;Parent=gene-L8R42_004559;Dbxref=NCBI_GP:HBQ7392575.1;Name=HBQ7392575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=L8R42_004559;product=riboflavin synthase;protein_id=HBQ7392575.1;transl_table=11 ##sequence-region DAFVNP010000142.1 1 6584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000142.1 tpg region 1 6584 . + . ID=DAFVNP010000142.1:1..6584;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000142.1 tpg gene 1 941 . + . ID=gene-L8R42_004560;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=L8R42_004560;partial=true;start_range=.,1 DAFVNP010000142.1 Protein Homology CDS 1 941 . + 2 ID=cds-HBQ7392576.1;Parent=gene-L8R42_004560;Dbxref=NCBI_GP:HBQ7392576.1;Name=HBQ7392576.1;gbkey=CDS;gene=tehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=L8R42_004560;partial=true;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=HBQ7392576.1;start_range=.,1;transl_table=11 DAFVNP010000142.1 tpg gene 928 1524 . + . ID=gene-L8R42_004561;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=L8R42_004561 DAFVNP010000142.1 Protein Homology CDS 928 1524 . + 0 ID=cds-HBQ7392577.1;Parent=gene-L8R42_004561;Dbxref=NCBI_GP:HBQ7392577.1;Name=HBQ7392577.1;gbkey=CDS;gene=tehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=L8R42_004561;product=tellurite resistance methyltransferase TehB;protein_id=HBQ7392577.1;transl_table=11 DAFVNP010000142.1 tpg gene 1680 2348 . + . ID=gene-L8R42_004562;Name=L8R42_004562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004562 DAFVNP010000142.1 Protein Homology CDS 1680 2348 . + 0 ID=cds-HBQ7392578.1;Parent=gene-L8R42_004562;Dbxref=NCBI_GP:HBQ7392578.1;Name=HBQ7392578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=L8R42_004562;product=DUF3313 domain-containing protein;protein_id=HBQ7392578.1;transl_table=11 DAFVNP010000142.1 tpg gene 2402 3580 . - . ID=gene-L8R42_004563;Name=L8R42_004563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004563 DAFVNP010000142.1 Protein Homology CDS 2402 3580 . - 0 ID=cds-HBQ7392579.1;Parent=gene-L8R42_004563;Dbxref=NCBI_GP:HBQ7392579.1;Name=HBQ7392579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=L8R42_004563;product=benzoate/H(+) symporter BenE family transporter;protein_id=HBQ7392579.1;transl_table=11 DAFVNP010000142.1 tpg gene 3672 4208 . + . ID=gene-L8R42_004564;Name=L8R42_004564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004564 DAFVNP010000142.1 Protein Homology CDS 3672 4208 . + 0 ID=cds-HBQ7392580.1;Parent=gene-L8R42_004564;Dbxref=NCBI_GP:HBQ7392580.1;Name=HBQ7392580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=L8R42_004564;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7392580.1;transl_table=11 DAFVNP010000142.1 tpg gene 4287 6251 . + . ID=gene-L8R42_004565;Name=L8R42_004565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004565 DAFVNP010000142.1 Protein Homology CDS 4287 6251 . + 0 ID=cds-HBQ7392581.1;Parent=gene-L8R42_004565;Dbxref=NCBI_GP:HBQ7392581.1;Name=HBQ7392581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=L8R42_004565;product=U32 family peptidase;protein_id=HBQ7392581.1;transl_table=11 DAFVNP010000142.1 tpg gene 6252 6482 . - . ID=gene-L8R42_004566;Name=L8R42_004566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004566 DAFVNP010000142.1 Protein Homology CDS 6252 6482 . - 0 ID=cds-HBQ7392582.1;Parent=gene-L8R42_004566;Dbxref=NCBI_GP:HBQ7392582.1;Name=HBQ7392582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=L8R42_004566;product=YncJ family protein;protein_id=HBQ7392582.1;transl_table=11 ##sequence-region DAFVNP010000143.1 1 6559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000143.1 tpg region 1 6559 . + . ID=DAFVNP010000143.1:1..6559;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000143.1 tpg gene 135 1592 . - . ID=gene-L8R42_004567;Name=L8R42_004567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004567 DAFVNP010000143.1 Protein Homology CDS 135 1592 . - 0 ID=cds-HBQ7392583.1;Parent=gene-L8R42_004567;Dbxref=NCBI_GP:HBQ7392583.1;Name=HBQ7392583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=L8R42_004567;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=HBQ7392583.1;transl_table=11 DAFVNP010000143.1 tpg gene 1752 1827 . + . ID=gene-L8R42_004568;Name=L8R42_004568;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004568 DAFVNP010000143.1 tRNAscan-SE tRNA 1752 1827 . + . ID=rna-L8R42_004568;Parent=gene-L8R42_004568;anticodon=(pos:1785..1787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004568;product=tRNA-Asn DAFVNP010000143.1 tRNAscan-SE exon 1752 1827 . + . ID=exon-L8R42_004568-1;Parent=rna-L8R42_004568;anticodon=(pos:1785..1787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004568;product=tRNA-Asn DAFVNP010000143.1 tpg gene 1993 2295 . + . ID=gene-L8R42_004569;Name=L8R42_004569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004569 DAFVNP010000143.1 Protein Homology CDS 1993 2295 . + 0 ID=cds-HBQ7392584.1;Parent=gene-L8R42_004569;Dbxref=NCBI_GP:HBQ7392584.1;Name=HBQ7392584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835997.1;locus_tag=L8R42_004569;product=DUF4102 domain-containing protein;protein_id=HBQ7392584.1;transl_table=11 DAFVNP010000143.1 tpg gene 2314 3363 . - . ID=gene-L8R42_004570;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=L8R42_004570 DAFVNP010000143.1 Protein Homology CDS 2314 3363 . - 0 ID=cds-HBQ7392585.1;Parent=gene-L8R42_004570;Dbxref=NCBI_GP:HBQ7392585.1;Name=HBQ7392585.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276037.1;locus_tag=L8R42_004570;product=ACR3 family arsenite efflux transporter;protein_id=HBQ7392585.1;transl_table=11 DAFVNP010000143.1 tpg gene 3381 5141 . - . ID=gene-L8R42_004571;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=L8R42_004571 DAFVNP010000143.1 Protein Homology CDS 3381 5141 . - 0 ID=cds-HBQ7392586.1;Parent=gene-L8R42_004571;Dbxref=NCBI_GP:HBQ7392586.1;Name=HBQ7392586.1;gbkey=CDS;gene=arsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497796.1;locus_tag=L8R42_004571;product=arsenical pump-driving ATPase;protein_id=HBQ7392586.1;transl_table=11 DAFVNP010000143.1 tpg gene 5185 5547 . - . ID=gene-L8R42_004572;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=L8R42_004572 DAFVNP010000143.1 Protein Homology CDS 5185 5547 . - 0 ID=cds-HBQ7392587.1;Parent=gene-L8R42_004572;Dbxref=NCBI_GP:HBQ7392587.1;Name=HBQ7392587.1;gbkey=CDS;gene=arsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855179.1;locus_tag=L8R42_004572;product=arsenite efflux transporter metallochaperone ArsD;protein_id=HBQ7392587.1;transl_table=11 DAFVNP010000143.1 tpg gene 5581 6057 . - . ID=gene-L8R42_004573;Name=L8R42_004573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004573 DAFVNP010000143.1 Protein Homology CDS 5581 6057 . - 0 ID=cds-HBQ7392588.1;Parent=gene-L8R42_004573;Dbxref=NCBI_GP:HBQ7392588.1;Name=HBQ7392588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101538.1;locus_tag=L8R42_004573;product=arsenate reductase ArsC;protein_id=HBQ7392588.1;transl_table=11 DAFVNP010000143.1 tpg gene 6054 6428 . - . ID=gene-L8R42_004574;Name=L8R42_004574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004574 DAFVNP010000143.1 Protein Homology CDS 6054 6428 . - 0 ID=cds-HBQ7392589.1;Parent=gene-L8R42_004574;Dbxref=NCBI_GP:HBQ7392589.1;Name=HBQ7392589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041816.1;locus_tag=L8R42_004574;product=helix-turn-helix transcriptional regulator;protein_id=HBQ7392589.1;transl_table=11 ##sequence-region DAFVNP010000144.1 1 6541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000144.1 tpg region 1 6541 . + . ID=DAFVNP010000144.1:1..6541;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000144.1 tpg gene 193 870 . - . ID=gene-L8R42_004575;Name=L8R42_004575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004575 DAFVNP010000144.1 Protein Homology CDS 193 870 . - 0 ID=cds-HBQ7392590.1;Parent=gene-L8R42_004575;Dbxref=NCBI_GP:HBQ7392590.1;Name=HBQ7392590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=L8R42_004575;product=hydrolase;protein_id=HBQ7392590.1;transl_table=11 DAFVNP010000144.1 tpg gene 890 1750 . - . ID=gene-L8R42_004576;Name=L8R42_004576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004576 DAFVNP010000144.1 Protein Homology CDS 890 1750 . - 0 ID=cds-HBQ7392591.1;Parent=gene-L8R42_004576;Dbxref=NCBI_GP:HBQ7392591.1;Name=HBQ7392591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=L8R42_004576;product=pirin family protein;protein_id=HBQ7392591.1;transl_table=11 DAFVNP010000144.1 tpg gene 1859 2770 . + . ID=gene-L8R42_004577;Name=L8R42_004577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004577 DAFVNP010000144.1 Protein Homology CDS 1859 2770 . + 0 ID=cds-HBQ7392592.1;Parent=gene-L8R42_004577;Dbxref=NCBI_GP:HBQ7392592.1;Name=HBQ7392592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=L8R42_004577;product=LysR family transcriptional regulator;protein_id=HBQ7392592.1;transl_table=11 DAFVNP010000144.1 tpg gene 2861 3079 . - . ID=gene-L8R42_004578;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=L8R42_004578 DAFVNP010000144.1 Protein Homology CDS 2861 3079 . - 0 ID=cds-HBQ7392593.1;Parent=gene-L8R42_004578;Dbxref=NCBI_GP:HBQ7392593.1;Name=HBQ7392593.1;gbkey=CDS;gene=infA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=L8R42_004578;product=translation initiation factor IF-1;protein_id=HBQ7392593.1;transl_table=11 DAFVNP010000144.1 tpg gene 3007 3390 . - . ID=gene-L8R42_004579;Name=L8R42_004579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004579 DAFVNP010000144.1 Protein Homology CDS 3007 3390 . - 0 ID=cds-HBQ7392594.1;Parent=gene-L8R42_004579;Dbxref=NCBI_GP:HBQ7392594.1;Name=HBQ7392594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459930.1;locus_tag=L8R42_004579;product=hypothetical protein;protein_id=HBQ7392594.1;transl_table=11 DAFVNP010000144.1 tpg gene 3391 4095 . - . ID=gene-L8R42_004580;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=L8R42_004580 DAFVNP010000144.1 Protein Homology CDS 3391 4095 . - 0 ID=cds-HBQ7392595.1;Parent=gene-L8R42_004580;Dbxref=NCBI_GP:HBQ7392595.1;Name=HBQ7392595.1;gbkey=CDS;gene=aat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=L8R42_004580;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=HBQ7392595.1;transl_table=11 DAFVNP010000144.1 tpg gene 4140 5861 . - . ID=gene-L8R42_004581;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=L8R42_004581 DAFVNP010000144.1 Protein Homology CDS 4140 5861 . - 0 ID=cds-HBQ7392596.1;Parent=gene-L8R42_004581;Dbxref=NCBI_GP:HBQ7392596.1;Name=HBQ7392596.1;gbkey=CDS;gene=cydC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=L8R42_004581;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=HBQ7392596.1;transl_table=11 DAFVNP010000144.1 tpg gene 5862 6541 . - . ID=gene-L8R42_004582;Name=L8R42_004582;end_range=6541,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004582;partial=true DAFVNP010000144.1 Protein Homology CDS 5862 6541 . - 2 ID=cds-HBQ7392597.1;Parent=gene-L8R42_004582;Dbxref=NCBI_GP:HBQ7392597.1;Name=HBQ7392597.1;end_range=6541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=L8R42_004582;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=HBQ7392597.1;transl_table=11 ##sequence-region DAFVNP010000145.1 1 6282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000145.1 tpg region 1 6282 . + . ID=DAFVNP010000145.1:1..6282;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000145.1 tpg gene 180 371 . + . ID=gene-L8R42_004583;Name=L8R42_004583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004583 DAFVNP010000145.1 Protein Homology CDS 180 371 . + 0 ID=cds-HBQ7392598.1;Parent=gene-L8R42_004583;Dbxref=NCBI_GP:HBQ7392598.1;Name=HBQ7392598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=L8R42_004583;product=DUF2633 family protein;protein_id=HBQ7392598.1;transl_table=11 DAFVNP010000145.1 tpg gene 600 1115 . + . ID=gene-L8R42_004584;Name=L8R42_004584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004584 DAFVNP010000145.1 Protein Homology CDS 600 1115 . + 0 ID=cds-HBQ7392599.1;Parent=gene-L8R42_004584;Dbxref=NCBI_GP:HBQ7392599.1;Name=HBQ7392599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311394.2;locus_tag=L8R42_004584;product=glycine zipper 2TM domain-containing protein;protein_id=HBQ7392599.1;transl_table=11 DAFVNP010000145.1 tpg gene 1131 1670 . + . ID=gene-L8R42_004585;Name=L8R42_004585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004585 DAFVNP010000145.1 Protein Homology CDS 1131 1670 . + 0 ID=cds-HBQ7392600.1;Parent=gene-L8R42_004585;Dbxref=NCBI_GP:HBQ7392600.1;Name=HBQ7392600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505922.1;locus_tag=L8R42_004585;product=DUF5384 family protein;protein_id=HBQ7392600.1;transl_table=11 DAFVNP010000145.1 tpg gene 1899 2642 . + . ID=gene-L8R42_004586;Name=L8R42_004586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004586 DAFVNP010000145.1 Protein Homology CDS 1899 2642 . + 0 ID=cds-HBQ7392601.1;Parent=gene-L8R42_004586;Dbxref=NCBI_GP:HBQ7392601.1;Name=HBQ7392601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651380.1;locus_tag=L8R42_004586;product=hypothetical protein;protein_id=HBQ7392601.1;transl_table=11 DAFVNP010000145.1 tpg gene 3100 3432 . - . ID=gene-L8R42_004587;Name=L8R42_004587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004587 DAFVNP010000145.1 Protein Homology CDS 3100 3432 . - 0 ID=cds-HBQ7392602.1;Parent=gene-L8R42_004587;Dbxref=NCBI_GP:HBQ7392602.1;Name=HBQ7392602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853130.1;locus_tag=L8R42_004587;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HBQ7392602.1;transl_table=11 DAFVNP010000145.1 tpg gene 3463 3696 . - . ID=gene-L8R42_004588;Name=L8R42_004588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004588 DAFVNP010000145.1 Protein Homology CDS 3463 3696 . - 0 ID=cds-HBQ7392603.1;Parent=gene-L8R42_004588;Dbxref=NCBI_GP:HBQ7392603.1;Name=HBQ7392603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801504.1;locus_tag=L8R42_004588;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HBQ7392603.1;transl_table=11 DAFVNP010000145.1 tpg pseudogene 4044 4647 . + . ID=gene-L8R42_004589;Name=L8R42_004589;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004589;pseudo=true DAFVNP010000145.1 Protein Homology CDS 4044 4647 . + 0 ID=cds-L8R42_004589;Parent=gene-L8R42_004589;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461668.1;locus_tag=L8R42_004589;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000145.1 tpg gene 4928 5890 . + . ID=gene-L8R42_004590;Name=L8R42_004590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004590 DAFVNP010000145.1 GeneMarkS-2+ CDS 4928 5890 . + 0 ID=cds-HBQ7392604.1;Parent=gene-L8R42_004590;Dbxref=NCBI_GP:HBQ7392604.1;Name=HBQ7392604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_004590;product=hypothetical protein;protein_id=HBQ7392604.1;transl_table=11 DAFVNP010000145.1 tpg gene 6159 6282 . - . ID=gene-L8R42_004591;Name=L8R42_004591;end_range=6282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004591;partial=true DAFVNP010000145.1 Protein Homology CDS 6159 6282 . - 1 ID=cds-HBQ7392605.1;Parent=gene-L8R42_004591;Dbxref=NCBI_GP:HBQ7392605.1;Name=HBQ7392605.1;end_range=6282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=L8R42_004591;partial=true;product=transposase;protein_id=HBQ7392605.1;transl_table=11 ##sequence-region DAFVNP010000146.1 1 6174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000146.1 tpg region 1 6174 . + . ID=DAFVNP010000146.1:1..6174;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000146.1 tpg gene 1 665 . - . ID=gene-L8R42_004592;Name=L8R42_004592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004592;partial=true;start_range=.,1 DAFVNP010000146.1 Protein Homology CDS 1 665 . - 0 ID=cds-HBQ7392606.1;Parent=gene-L8R42_004592;Dbxref=NCBI_GP:HBQ7392606.1;Name=HBQ7392606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=L8R42_004592;partial=true;product=CTP synthase;protein_id=HBQ7392606.1;start_range=.,1;transl_table=11 DAFVNP010000146.1 tpg gene 893 1693 . - . ID=gene-L8R42_004593;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=L8R42_004593 DAFVNP010000146.1 Protein Homology CDS 893 1693 . - 0 ID=cds-HBQ7392607.1;Parent=gene-L8R42_004593;Dbxref=NCBI_GP:HBQ7392607.1;Name=HBQ7392607.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=L8R42_004593;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=HBQ7392607.1;transl_table=11 DAFVNP010000146.1 tpg gene 2304 2891 . + . ID=gene-L8R42_004594;Name=L8R42_004594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004594 DAFVNP010000146.1 Protein Homology CDS 2304 2891 . + 0 ID=cds-HBQ7392608.1;Parent=gene-L8R42_004594;Dbxref=NCBI_GP:HBQ7392608.1;Name=HBQ7392608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=L8R42_004594;product=fimbrial protein;protein_id=HBQ7392608.1;transl_table=11 DAFVNP010000146.1 tpg gene 2971 5670 . + . ID=gene-L8R42_004595;Name=L8R42_004595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004595 DAFVNP010000146.1 Protein Homology CDS 2971 5670 . + 0 ID=cds-HBQ7392609.1;Parent=gene-L8R42_004595;Dbxref=NCBI_GP:HBQ7392609.1;Name=HBQ7392609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=L8R42_004595;product=fimbrial biogenesis outer membrane usher protein;protein_id=HBQ7392609.1;transl_table=11 DAFVNP010000146.1 tpg gene 5683 6174 . + . ID=gene-L8R42_004596;Name=L8R42_004596;end_range=6174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004596;partial=true DAFVNP010000146.1 Protein Homology CDS 5683 6174 . + 0 ID=cds-HBQ7392610.1;Parent=gene-L8R42_004596;Dbxref=NCBI_GP:HBQ7392610.1;Name=HBQ7392610.1;end_range=6174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=L8R42_004596;partial=true;product=fimbria/pilus periplasmic chaperone;protein_id=HBQ7392610.1;transl_table=11 ##sequence-region DAFVNP010000147.1 1 5799 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000147.1 tpg region 1 5799 . + . ID=DAFVNP010000147.1:1..5799;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000147.1 tpg gene 1 190 . - . ID=gene-L8R42_004597;Name=L8R42_004597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004597;partial=true;start_range=.,1 DAFVNP010000147.1 Protein Homology CDS 1 190 . - 0 ID=cds-HBQ7392611.1;Parent=gene-L8R42_004597;Dbxref=NCBI_GP:HBQ7392611.1;Name=HBQ7392611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=L8R42_004597;partial=true;product=Secreted effector kinase SteC;protein_id=HBQ7392611.1;start_range=.,1;transl_table=11 DAFVNP010000147.1 tpg gene 225 428 . + . ID=gene-L8R42_004598;Name=L8R42_004598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004598 DAFVNP010000147.1 Protein Homology CDS 225 428 . + 0 ID=cds-HBQ7392612.1;Parent=gene-L8R42_004598;Dbxref=NCBI_GP:HBQ7392612.1;Name=HBQ7392612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518100.1;locus_tag=L8R42_004598;product=hypothetical protein;protein_id=HBQ7392612.1;transl_table=11 DAFVNP010000147.1 tpg gene 510 803 . + . ID=gene-L8R42_004599;Name=L8R42_004599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004599 DAFVNP010000147.1 Protein Homology CDS 510 803 . + 0 ID=cds-HBQ7392613.1;Parent=gene-L8R42_004599;Dbxref=NCBI_GP:HBQ7392613.1;Name=HBQ7392613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=L8R42_004599;product=hypothetical protein;protein_id=HBQ7392613.1;transl_table=11 DAFVNP010000147.1 tpg gene 921 1709 . + . ID=gene-L8R42_004600;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=L8R42_004600 DAFVNP010000147.1 Protein Homology CDS 921 1709 . + 0 ID=cds-HBQ7392614.1;Parent=gene-L8R42_004600;Dbxref=NCBI_GP:HBQ7392614.1;Name=HBQ7392614.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=L8R42_004600;product=enoyl-ACP reductase FabI;protein_id=HBQ7392614.1;transl_table=11 DAFVNP010000147.1 tpg gene 1909 3042 . + . ID=gene-L8R42_004601;Name=L8R42_004601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004601 DAFVNP010000147.1 Protein Homology CDS 1909 3042 . + 0 ID=cds-HBQ7392615.1;Parent=gene-L8R42_004601;Dbxref=NCBI_GP:HBQ7392615.1;Name=HBQ7392615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434200.1;locus_tag=L8R42_004601;product=CMD domain-containing protein;protein_id=HBQ7392615.1;transl_table=11 DAFVNP010000147.1 tpg gene 3131 5065 . + . ID=gene-L8R42_004602;Name=L8R42_004602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004602 DAFVNP010000147.1 Protein Homology CDS 3131 5065 . + 0 ID=cds-HBQ7392616.1;Parent=gene-L8R42_004602;Dbxref=NCBI_GP:HBQ7392616.1;Name=HBQ7392616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=L8R42_004602;product=exoribonuclease II;protein_id=HBQ7392616.1;transl_table=11 DAFVNP010000147.1 tpg gene 5327 5799 . + . ID=gene-L8R42_004603;Name=L8R42_004603;end_range=5799,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004603;partial=true DAFVNP010000147.1 Protein Homology CDS 5327 5799 . + 0 ID=cds-HBQ7392617.1;Parent=gene-L8R42_004603;Dbxref=NCBI_GP:HBQ7392617.1;Name=HBQ7392617.1;end_range=5799,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=L8R42_004603;partial=true;product=PAS domain S-box protein;protein_id=HBQ7392617.1;transl_table=11 ##sequence-region DAFVNP010000148.1 1 5765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000148.1 tpg region 1 5765 . + . ID=DAFVNP010000148.1:1..5765;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000148.1 tpg gene 229 1167 . + . ID=gene-L8R42_004604;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=L8R42_004604 DAFVNP010000148.1 Protein Homology CDS 229 1167 . + 0 ID=cds-HBQ7392618.1;Parent=gene-L8R42_004604;Dbxref=NCBI_GP:HBQ7392618.1;Name=HBQ7392618.1;gbkey=CDS;gene=ghrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=L8R42_004604;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=HBQ7392618.1;transl_table=11 DAFVNP010000148.1 tpg gene 1252 1989 . + . ID=gene-L8R42_004605;Name=L8R42_004605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004605 DAFVNP010000148.1 Protein Homology CDS 1252 1989 . + 0 ID=cds-HBQ7392619.1;Parent=gene-L8R42_004605;Dbxref=NCBI_GP:HBQ7392619.1;Name=HBQ7392619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=L8R42_004605;product=phosphatase;protein_id=HBQ7392619.1;transl_table=11 DAFVNP010000148.1 tpg gene 2013 2567 . + . ID=gene-L8R42_004606;Name=L8R42_004606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004606 DAFVNP010000148.1 Protein Homology CDS 2013 2567 . + 0 ID=cds-HBQ7392620.1;Parent=gene-L8R42_004606;Dbxref=NCBI_GP:HBQ7392620.1;Name=HBQ7392620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=L8R42_004606;product=molecular chaperone;protein_id=HBQ7392620.1;transl_table=11 DAFVNP010000148.1 tpg gene 2668 3150 . + . ID=gene-L8R42_004607;Name=L8R42_004607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004607 DAFVNP010000148.1 Protein Homology CDS 2668 3150 . + 0 ID=cds-HBQ7392621.1;Parent=gene-L8R42_004607;Dbxref=NCBI_GP:HBQ7392621.1;Name=HBQ7392621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=L8R42_004607;product=DUF1097 domain-containing protein;protein_id=HBQ7392621.1;transl_table=11 DAFVNP010000148.1 tpg gene 3189 4022 . - . ID=gene-L8R42_004608;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=L8R42_004608 DAFVNP010000148.1 Protein Homology CDS 3189 4022 . - 0 ID=cds-HBQ7392622.1;Parent=gene-L8R42_004608;Dbxref=NCBI_GP:HBQ7392622.1;Name=HBQ7392622.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=L8R42_004608;product=curli production assembly/transport protein CsgG;protein_id=HBQ7392622.1;transl_table=11 DAFVNP010000148.1 tpg gene 4049 4465 . - . ID=gene-L8R42_004609;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=L8R42_004609 DAFVNP010000148.1 Protein Homology CDS 4049 4465 . - 0 ID=cds-HBQ7392623.1;Parent=gene-L8R42_004609;Dbxref=NCBI_GP:HBQ7392623.1;Name=HBQ7392623.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=L8R42_004609;product=curli production assembly/transport protein CsgF;protein_id=HBQ7392623.1;transl_table=11 DAFVNP010000148.1 tpg gene 4492 4887 . - . ID=gene-L8R42_004610;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=L8R42_004610 DAFVNP010000148.1 Protein Homology CDS 4492 4887 . - 0 ID=cds-HBQ7392624.1;Parent=gene-L8R42_004610;Dbxref=NCBI_GP:HBQ7392624.1;Name=HBQ7392624.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=L8R42_004610;product=curli production assembly/transport protein CsgE;protein_id=HBQ7392624.1;transl_table=11 DAFVNP010000148.1 tpg gene 4892 5542 . - . ID=gene-L8R42_004611;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=L8R42_004611 DAFVNP010000148.1 Protein Homology CDS 4892 5542 . - 0 ID=cds-HBQ7392625.1;Parent=gene-L8R42_004611;Dbxref=NCBI_GP:HBQ7392625.1;Name=HBQ7392625.1;gbkey=CDS;gene=csgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=L8R42_004611;product=transcriptional regulator CsgD;protein_id=HBQ7392625.1;transl_table=11 ##sequence-region DAFVNP010000149.1 1 5712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000149.1 tpg region 1 5712 . + . ID=DAFVNP010000149.1:1..5712;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000149.1 tpg gene 786 1007 . - . ID=gene-L8R42_004612;Name=L8R42_004612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004612 DAFVNP010000149.1 Protein Homology CDS 786 1007 . - 0 ID=cds-HBQ7392626.1;Parent=gene-L8R42_004612;Dbxref=NCBI_GP:HBQ7392626.1;Name=HBQ7392626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=L8R42_004612;product=hypothetical protein;protein_id=HBQ7392626.1;transl_table=11 DAFVNP010000149.1 tpg gene 1244 4357 . - . ID=gene-L8R42_004613;Name=L8R42_004613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004613 DAFVNP010000149.1 Protein Homology CDS 1244 4357 . - 0 ID=cds-HBQ7392627.1;Parent=gene-L8R42_004613;Dbxref=NCBI_GP:HBQ7392627.1;Name=HBQ7392627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=L8R42_004613;product=multidrug efflux RND transporter permease subunit;protein_id=HBQ7392627.1;transl_table=11 DAFVNP010000149.1 tpg gene 4369 5526 . - . ID=gene-L8R42_004614;Name=L8R42_004614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004614 DAFVNP010000149.1 Protein Homology CDS 4369 5526 . - 0 ID=cds-HBQ7392628.1;Parent=gene-L8R42_004614;Dbxref=NCBI_GP:HBQ7392628.1;Name=HBQ7392628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=L8R42_004614;product=efflux RND transporter periplasmic adaptor subunit;protein_id=HBQ7392628.1;transl_table=11 ##sequence-region DAFVNP010000150.1 1 5486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000150.1 tpg region 1 5486 . + . ID=DAFVNP010000150.1:1..5486;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000150.1 tpg gene 1 1104 . - . ID=gene-L8R42_004615;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=L8R42_004615;partial=true;start_range=.,1 DAFVNP010000150.1 Protein Homology CDS 1 1104 . - 0 ID=cds-HBQ7392629.1;Parent=gene-L8R42_004615;Dbxref=NCBI_GP:HBQ7392629.1;Name=HBQ7392629.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=L8R42_004615;partial=true;product=AI-2E family transporter YdiK;protein_id=HBQ7392629.1;start_range=.,1;transl_table=11 DAFVNP010000150.1 tpg gene 1369 4425 . + . ID=gene-L8R42_004616;Name=L8R42_004616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004616 DAFVNP010000150.1 Protein Homology CDS 1369 4425 . + 0 ID=cds-HBQ7392630.1;Parent=gene-L8R42_004616;Dbxref=NCBI_GP:HBQ7392630.1;Name=HBQ7392630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=L8R42_004616;product=FAD-binding oxidoreductase;protein_id=HBQ7392630.1;transl_table=11 DAFVNP010000150.1 tpg gene 4422 4832 . + . ID=gene-L8R42_004617;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=L8R42_004617 DAFVNP010000150.1 Protein Homology CDS 4422 4832 . + 0 ID=cds-HBQ7392631.1;Parent=gene-L8R42_004617;Dbxref=NCBI_GP:HBQ7392631.1;Name=HBQ7392631.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=L8R42_004617;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=HBQ7392631.1;transl_table=11 DAFVNP010000150.1 tpg gene 4931 5119 . + . ID=gene-L8R42_004618;Name=L8R42_004618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004618 DAFVNP010000150.1 Protein Homology CDS 4931 5119 . + 0 ID=cds-HBQ7392632.1;Parent=gene-L8R42_004618;Dbxref=NCBI_GP:HBQ7392632.1;Name=HBQ7392632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=L8R42_004618;product=YdiH family protein;protein_id=HBQ7392632.1;transl_table=11 ##sequence-region DAFVNP010000151.1 1 5386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000151.1 tpg region 1 5386 . + . ID=DAFVNP010000151.1:1..5386;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000151.1 tpg pseudogene 187 492 . + . ID=gene-L8R42_004619;Name=L8R42_004619;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004619;pseudo=true DAFVNP010000151.1 Protein Homology CDS 187 492 . + 0 ID=cds-L8R42_004619;Parent=gene-L8R42_004619;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728926.1;locus_tag=L8R42_004619;product=integrase domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000151.1 tpg gene 839 2374 . + . ID=gene-L8R42_004620;Name=L8R42_004620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004620 DAFVNP010000151.1 Protein Homology CDS 839 2374 . + 0 ID=cds-HBQ7392633.1;Parent=gene-L8R42_004620;Dbxref=NCBI_GP:HBQ7392633.1;Name=HBQ7392633.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013232.1%2CHMM:NF036729.1;locus_tag=L8R42_004620;product=phosphorylase;protein_id=HBQ7392633.1;transl_table=11 DAFVNP010000151.1 tpg gene 2428 3375 . + . ID=gene-L8R42_004621;Name=L8R42_004621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004621 DAFVNP010000151.1 Protein Homology CDS 2428 3375 . + 0 ID=cds-HBQ7392634.1;Parent=gene-L8R42_004621;Dbxref=NCBI_GP:HBQ7392634.1;Name=HBQ7392634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534692.1;locus_tag=L8R42_004621;product=nucleotidyltransferase;protein_id=HBQ7392634.1;transl_table=11 DAFVNP010000151.1 tpg gene 3381 3869 . + . ID=gene-L8R42_004622;Name=L8R42_004622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004622 DAFVNP010000151.1 Protein Homology CDS 3381 3869 . + 0 ID=cds-HBQ7392635.1;Parent=gene-L8R42_004622;Dbxref=NCBI_GP:HBQ7392635.1;Name=HBQ7392635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037203.1;locus_tag=L8R42_004622;product=hypothetical protein;protein_id=HBQ7392635.1;transl_table=11 DAFVNP010000151.1 tpg gene 3866 4762 . + . ID=gene-L8R42_004623;Name=L8R42_004623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004623 DAFVNP010000151.1 Protein Homology CDS 3866 4762 . + 0 ID=cds-HBQ7392636.1;Parent=gene-L8R42_004623;Dbxref=NCBI_GP:HBQ7392636.1;Name=HBQ7392636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534689.1;locus_tag=L8R42_004623;product=ATP-binding protein;protein_id=HBQ7392636.1;transl_table=11 DAFVNP010000151.1 tpg gene 4788 5342 . + . ID=gene-L8R42_004624;Name=L8R42_004624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004624 DAFVNP010000151.1 Protein Homology CDS 4788 5342 . + 0 ID=cds-HBQ7392637.1;Parent=gene-L8R42_004624;Dbxref=NCBI_GP:HBQ7392637.1;Name=HBQ7392637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157201.1;locus_tag=L8R42_004624;product=3'-5' exonuclease;protein_id=HBQ7392637.1;transl_table=11 ##sequence-region DAFVNP010000152.1 1 5278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000152.1 tpg region 1 5278 . + . ID=DAFVNP010000152.1:1..5278;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000152.1 tpg gene 205 1755 . - . ID=gene-L8R42_004625;Name=L8R42_004625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004625 DAFVNP010000152.1 Protein Homology CDS 205 1755 . - 0 ID=cds-HBQ7392638.1;Parent=gene-L8R42_004625;Dbxref=NCBI_GP:HBQ7392638.1;Name=HBQ7392638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=L8R42_004625;product=glycosyltransferase family 39 protein;protein_id=HBQ7392638.1;transl_table=11 DAFVNP010000152.1 tpg gene 1892 2572 . - . ID=gene-L8R42_004626;Name=L8R42_004626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004626 DAFVNP010000152.1 Protein Homology CDS 1892 2572 . - 0 ID=cds-HBQ7392639.1;Parent=gene-L8R42_004626;Dbxref=NCBI_GP:HBQ7392639.1;Name=HBQ7392639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=L8R42_004626;product=amino acid ABC transporter permease;protein_id=HBQ7392639.1;transl_table=11 DAFVNP010000152.1 tpg gene 2569 3300 . - . ID=gene-L8R42_004627;Name=L8R42_004627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004627 DAFVNP010000152.1 Protein Homology CDS 2569 3300 . - 0 ID=cds-HBQ7392640.1;Parent=gene-L8R42_004627;Dbxref=NCBI_GP:HBQ7392640.1;Name=HBQ7392640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=L8R42_004627;product=amino acid ABC transporter ATP-binding protein;protein_id=HBQ7392640.1;transl_table=11 DAFVNP010000152.1 tpg gene 3325 3972 . - . ID=gene-L8R42_004628;Name=L8R42_004628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004628 DAFVNP010000152.1 Protein Homology CDS 3325 3972 . - 0 ID=cds-HBQ7392641.1;Parent=gene-L8R42_004628;Dbxref=NCBI_GP:HBQ7392641.1;Name=HBQ7392641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=L8R42_004628;product=amino acid ABC transporter permease;protein_id=HBQ7392641.1;transl_table=11 DAFVNP010000152.1 tpg gene 3979 4740 . - . ID=gene-L8R42_004629;Name=L8R42_004629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004629 DAFVNP010000152.1 Protein Homology CDS 3979 4740 . - 0 ID=cds-HBQ7392642.1;Parent=gene-L8R42_004629;Dbxref=NCBI_GP:HBQ7392642.1;Name=HBQ7392642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=L8R42_004629;product=transporter substrate-binding domain-containing protein;protein_id=HBQ7392642.1;transl_table=11 ##sequence-region DAFVNP010000153.1 1 5181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000153.1 tpg region 1 5181 . + . ID=DAFVNP010000153.1:1..5181;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000153.1 tpg gene 1 2214 . + . ID=gene-L8R42_004630;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=L8R42_004630;partial=true;start_range=.,1 DAFVNP010000153.1 Protein Homology CDS 1 2214 . + 0 ID=cds-HBQ7392643.1;Parent=gene-L8R42_004630;Dbxref=NCBI_GP:HBQ7392643.1;Name=HBQ7392643.1;gbkey=CDS;gene=napA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=L8R42_004630;partial=true;product=nitrate reductase catalytic subunit NapA;protein_id=HBQ7392643.1;start_range=.,1;transl_table=11 DAFVNP010000153.1 tpg gene 2221 2916 . + . ID=gene-L8R42_004631;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=L8R42_004631 DAFVNP010000153.1 Protein Homology CDS 2221 2916 . + 0 ID=cds-HBQ7392644.1;Parent=gene-L8R42_004631;Dbxref=NCBI_GP:HBQ7392644.1;Name=HBQ7392644.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=L8R42_004631;product=ferredoxin-type protein NapG;protein_id=HBQ7392644.1;transl_table=11 DAFVNP010000153.1 tpg gene 2903 3772 . + . ID=gene-L8R42_004632;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=L8R42_004632 DAFVNP010000153.1 Protein Homology CDS 2903 3772 . + 0 ID=cds-HBQ7392645.1;Parent=gene-L8R42_004632;Dbxref=NCBI_GP:HBQ7392645.1;Name=HBQ7392645.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=L8R42_004632;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=HBQ7392645.1;transl_table=11 DAFVNP010000153.1 tpg gene 3888 4337 . + . ID=gene-L8R42_004633;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=L8R42_004633 DAFVNP010000153.1 Protein Homology CDS 3888 4337 . + 0 ID=cds-HBQ7392646.1;Parent=gene-L8R42_004633;Dbxref=NCBI_GP:HBQ7392646.1;Name=HBQ7392646.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=L8R42_004633;product=nitrate reductase cytochrome c-type subunit;protein_id=HBQ7392646.1;transl_table=11 DAFVNP010000153.1 tpg gene 4347 4949 . + . ID=gene-L8R42_004634;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=L8R42_004634 DAFVNP010000153.1 Protein Homology CDS 4347 4949 . + 0 ID=cds-HBQ7392647.1;Parent=gene-L8R42_004634;Dbxref=NCBI_GP:HBQ7392647.1;Name=HBQ7392647.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=L8R42_004634;product=cytochrome c-type protein NapC;protein_id=HBQ7392647.1;transl_table=11 DAFVNP010000153.1 tpg gene 4970 5181 . + . ID=gene-L8R42_004635;Name=L8R42_004635;end_range=5181,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004635;partial=true DAFVNP010000153.1 Protein Homology CDS 4970 5181 . + 0 ID=cds-HBQ7392648.1;Parent=gene-L8R42_004635;Dbxref=NCBI_GP:HBQ7392648.1;Name=HBQ7392648.1;end_range=5181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=L8R42_004635;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=HBQ7392648.1;transl_table=11 ##sequence-region DAFVNP010000154.1 1 4843 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000154.1 tpg region 1 4843 . + . ID=DAFVNP010000154.1:1..4843;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000154.1 tpg gene 1 2669 . - . ID=gene-L8R42_004636;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=L8R42_004636;partial=true;start_range=.,1 DAFVNP010000154.1 Protein Homology CDS 1 2669 . - 0 ID=cds-HBQ7392649.1;Parent=gene-L8R42_004636;Dbxref=NCBI_GP:HBQ7392649.1;Name=HBQ7392649.1;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=L8R42_004636;partial=true;product=aconitate hydratase AcnA;protein_id=HBQ7392649.1;start_range=.,1;transl_table=11 DAFVNP010000154.1 tpg gene 3225 3386 . - . ID=gene-L8R42_004637;Name=L8R42_004637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004637 DAFVNP010000154.1 Protein Homology CDS 3225 3386 . - 0 ID=cds-HBQ7392650.1;Parent=gene-L8R42_004637;Dbxref=NCBI_GP:HBQ7392650.1;Name=HBQ7392650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308615.1;locus_tag=L8R42_004637;product=YmiA family putative membrane protein;protein_id=HBQ7392650.1;transl_table=11 DAFVNP010000154.1 tpg gene 3646 4620 . - . ID=gene-L8R42_004638;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=L8R42_004638 DAFVNP010000154.1 Protein Homology CDS 3646 4620 . - 0 ID=cds-HBQ7392651.1;Parent=gene-L8R42_004638;Dbxref=NCBI_GP:HBQ7392651.1;Name=HBQ7392651.1;gbkey=CDS;gene=cysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=L8R42_004638;product=HTH-type transcriptional regulator CysB;protein_id=HBQ7392651.1;transl_table=11 ##sequence-region DAFVNP010000155.1 1 4782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000155.1 tpg region 1 4782 . + . ID=DAFVNP010000155.1:1..4782;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000155.1 tpg gene 160 1338 . + . ID=gene-L8R42_004639;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=L8R42_004639 DAFVNP010000155.1 Protein Homology CDS 160 1338 . + 0 ID=cds-HBQ7392652.1;Parent=gene-L8R42_004639;Dbxref=NCBI_GP:HBQ7392652.1;Name=HBQ7392652.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=L8R42_004639;product=porin OmpS1;protein_id=HBQ7392652.1;transl_table=11 DAFVNP010000155.1 tpg gene 1597 1785 . - . ID=gene-L8R42_004640;Name=L8R42_004640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004640 DAFVNP010000155.1 Protein Homology CDS 1597 1785 . - 0 ID=cds-HBQ7392653.1;Parent=gene-L8R42_004640;Dbxref=NCBI_GP:HBQ7392653.1;Name=HBQ7392653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=L8R42_004640;product=cold-shock protein;protein_id=HBQ7392653.1;transl_table=11 DAFVNP010000155.1 tpg gene 1796 2008 . - . ID=gene-L8R42_004641;Name=L8R42_004641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004641 DAFVNP010000155.1 Protein Homology CDS 1796 2008 . - 0 ID=cds-HBQ7392654.1;Parent=gene-L8R42_004641;Dbxref=NCBI_GP:HBQ7392654.1;Name=HBQ7392654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=L8R42_004641;product=cold-shock protein;protein_id=HBQ7392654.1;transl_table=11 DAFVNP010000155.1 tpg gene 2463 3731 . - . ID=gene-L8R42_004642;Name=L8R42_004642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004642 DAFVNP010000155.1 Protein Homology CDS 2463 3731 . - 0 ID=cds-HBQ7392655.1;Parent=gene-L8R42_004642;Dbxref=NCBI_GP:HBQ7392655.1;Name=HBQ7392655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=L8R42_004642;product=Y-family DNA polymerase;protein_id=HBQ7392655.1;transl_table=11 DAFVNP010000155.1 tpg gene 3734 4153 . - . ID=gene-L8R42_004643;Name=L8R42_004643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004643 DAFVNP010000155.1 Protein Homology CDS 3734 4153 . - 0 ID=cds-HBQ7392656.1;Parent=gene-L8R42_004643;Dbxref=NCBI_GP:HBQ7392656.1;Name=HBQ7392656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=L8R42_004643;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=HBQ7392656.1;transl_table=11 DAFVNP010000155.1 tpg gene 4280 4441 . - . ID=gene-L8R42_004644;Name=L8R42_004644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004644 DAFVNP010000155.1 Protein Homology CDS 4280 4441 . - 0 ID=cds-HBQ7392657.1;Parent=gene-L8R42_004644;Dbxref=NCBI_GP:HBQ7392657.1;Name=HBQ7392657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460950.1;locus_tag=L8R42_004644;product=hypothetical protein;protein_id=HBQ7392657.1;transl_table=11 ##sequence-region DAFVNP010000156.1 1 4757 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000156.1 tpg region 1 4757 . + . ID=DAFVNP010000156.1:1..4757;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000156.1 tpg gene 1 618 . - . ID=gene-L8R42_004645;Name=L8R42_004645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004645;partial=true;start_range=.,1 DAFVNP010000156.1 Protein Homology CDS 1 618 . - 0 ID=cds-HBQ7392658.1;Parent=gene-L8R42_004645;Dbxref=NCBI_GP:HBQ7392658.1;Name=HBQ7392658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=L8R42_004645;partial=true;product=UxaA family hydrolase;protein_id=HBQ7392658.1;start_range=.,1;transl_table=11 DAFVNP010000156.1 tpg gene 1148 1918 . + . ID=gene-L8R42_004646;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=L8R42_004646 DAFVNP010000156.1 Protein Homology CDS 1148 1918 . + 0 ID=cds-HBQ7392659.1;Parent=gene-L8R42_004646;Dbxref=NCBI_GP:HBQ7392659.1;Name=HBQ7392659.1;gbkey=CDS;gene=garL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=L8R42_004646;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=HBQ7392659.1;transl_table=11 DAFVNP010000156.1 tpg gene 1944 2834 . + . ID=gene-L8R42_004647;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=L8R42_004647 DAFVNP010000156.1 Protein Homology CDS 1944 2834 . + 0 ID=cds-HBQ7392660.1;Parent=gene-L8R42_004647;Dbxref=NCBI_GP:HBQ7392660.1;Name=HBQ7392660.1;gbkey=CDS;gene=garR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=L8R42_004647;product=2-hydroxy-3-oxopropionate reductase;protein_id=HBQ7392660.1;transl_table=11 DAFVNP010000156.1 tpg gene 2932 4077 . + . ID=gene-L8R42_004648;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=L8R42_004648 DAFVNP010000156.1 Protein Homology CDS 2932 4077 . + 0 ID=cds-HBQ7392661.1;Parent=gene-L8R42_004648;Dbxref=NCBI_GP:HBQ7392661.1;Name=HBQ7392661.1;gbkey=CDS;gene=garK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=L8R42_004648;product=glycerate 2-kinase;protein_id=HBQ7392661.1;transl_table=11 DAFVNP010000156.1 tpg gene 4110 4484 . + . ID=gene-L8R42_004649;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=L8R42_004649 DAFVNP010000156.1 cmsearch RNase_P_RNA 4110 4484 . + . ID=rna-L8R42_004649;Parent=gene-L8R42_004649;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004649;product=RNase P RNA component class A DAFVNP010000156.1 cmsearch exon 4110 4484 . + . ID=exon-L8R42_004649-1;Parent=rna-L8R42_004649;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004649;product=RNase P RNA component class A ##sequence-region DAFVNP010000157.1 1 4600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000157.1 tpg region 1 4600 . + . ID=DAFVNP010000157.1:1..4600;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000157.1 tpg gene 1 969 . + . ID=gene-L8R42_004650;Name=L8R42_004650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004650;partial=true;start_range=.,1 DAFVNP010000157.1 Protein Homology CDS 1 969 . + 0 ID=cds-HBQ7392662.1;Parent=gene-L8R42_004650;Dbxref=NCBI_GP:HBQ7392662.1;Name=HBQ7392662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=L8R42_004650;partial=true;product=N-acetylneuraminate epimerase;protein_id=HBQ7392662.1;start_range=.,1;transl_table=11 DAFVNP010000157.1 tpg gene 1015 1707 . + . ID=gene-L8R42_004651;Name=L8R42_004651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004651 DAFVNP010000157.1 Protein Homology CDS 1015 1707 . + 0 ID=cds-HBQ7392663.1;Parent=gene-L8R42_004651;Dbxref=NCBI_GP:HBQ7392663.1;Name=HBQ7392663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=L8R42_004651;product=outer membrane protein;protein_id=HBQ7392663.1;transl_table=11 DAFVNP010000157.1 tpg gene 1990 3270 . + . ID=gene-L8R42_004652;Name=L8R42_004652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004652 DAFVNP010000157.1 Protein Homology CDS 1990 3270 . + 0 ID=cds-HBQ7392664.1;Parent=gene-L8R42_004652;Dbxref=NCBI_GP:HBQ7392664.1;Name=HBQ7392664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=L8R42_004652;product=MFS transporter;protein_id=HBQ7392664.1;transl_table=11 DAFVNP010000157.1 tpg gene 3281 4387 . + . ID=gene-L8R42_004653;Name=L8R42_004653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004653 DAFVNP010000157.1 Protein Homology CDS 3281 4387 . + 0 ID=cds-HBQ7392665.1;Parent=gene-L8R42_004653;Dbxref=NCBI_GP:HBQ7392665.1;Name=HBQ7392665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=L8R42_004653;product=Gfo/Idh/MocA family oxidoreductase;protein_id=HBQ7392665.1;transl_table=11 ##sequence-region DAFVNP010000158.1 1 4527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000158.1 tpg region 1 4527 . + . ID=DAFVNP010000158.1:1..4527;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000158.1 tpg gene 1 260 . - . ID=gene-L8R42_004654;Name=L8R42_004654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004654;partial=true;start_range=.,1 DAFVNP010000158.1 Protein Homology CDS 1 260 . - 0 ID=cds-HBQ7392666.1;Parent=gene-L8R42_004654;Dbxref=NCBI_GP:HBQ7392666.1;Name=HBQ7392666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=L8R42_004654;partial=true;product=cytochrome c-type biogenesis protein CcmH;protein_id=HBQ7392666.1;start_range=.,1;transl_table=11 DAFVNP010000158.1 tpg gene 257 814 . - . ID=gene-L8R42_004655;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=L8R42_004655 DAFVNP010000158.1 Protein Homology CDS 257 814 . - 0 ID=cds-HBQ7392667.1;Parent=gene-L8R42_004655;Dbxref=NCBI_GP:HBQ7392667.1;Name=HBQ7392667.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=L8R42_004655;product=thiol:disulfide interchange protein DsbE;protein_id=HBQ7392667.1;transl_table=11 DAFVNP010000158.1 tpg gene 811 2742 . - . ID=gene-L8R42_004656;Name=L8R42_004656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004656 DAFVNP010000158.1 Protein Homology CDS 811 2742 . - 0 ID=cds-HBQ7392668.1;Parent=gene-L8R42_004656;Dbxref=NCBI_GP:HBQ7392668.1;Name=HBQ7392668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=L8R42_004656;product=heme lyase CcmF/NrfE family subunit;protein_id=HBQ7392668.1;transl_table=11 DAFVNP010000158.1 tpg gene 2739 3218 . - . ID=gene-L8R42_004657;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=L8R42_004657 DAFVNP010000158.1 Protein Homology CDS 2739 3218 . - 0 ID=cds-HBQ7392669.1;Parent=gene-L8R42_004657;Dbxref=NCBI_GP:HBQ7392669.1;Name=HBQ7392669.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=L8R42_004657;product=cytochrome c maturation protein CcmE;protein_id=HBQ7392669.1;transl_table=11 DAFVNP010000158.1 tpg gene 3215 3427 . - . ID=gene-L8R42_004658;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=L8R42_004658 DAFVNP010000158.1 Protein Homology CDS 3215 3427 . - 0 ID=cds-HBQ7392670.1;Parent=gene-L8R42_004658;Dbxref=NCBI_GP:HBQ7392670.1;Name=HBQ7392670.1;gbkey=CDS;gene=ccmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=L8R42_004658;product=heme exporter protein CcmD;protein_id=HBQ7392670.1;transl_table=11 DAFVNP010000158.1 tpg gene 3424 4161 . - . ID=gene-L8R42_004659;Name=L8R42_004659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004659 DAFVNP010000158.1 Protein Homology CDS 3424 4161 . - 0 ID=cds-HBQ7392671.1;Parent=gene-L8R42_004659;Dbxref=NCBI_GP:HBQ7392671.1;Name=HBQ7392671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=L8R42_004659;product=heme ABC transporter permease;protein_id=HBQ7392671.1;transl_table=11 DAFVNP010000158.1 tpg gene 4213 4527 . - . ID=gene-L8R42_004660;Name=L8R42_004660;end_range=4527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004660;partial=true DAFVNP010000158.1 Protein Homology CDS 4213 4527 . - 0 ID=cds-HBQ7392672.1;Parent=gene-L8R42_004660;Dbxref=NCBI_GP:HBQ7392672.1;Name=HBQ7392672.1;end_range=4527,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=L8R42_004660;partial=true;product=heme exporter protein CcmB;protein_id=HBQ7392672.1;transl_table=11 ##sequence-region DAFVNP010000159.1 1 4461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000159.1 tpg region 1 4461 . + . ID=DAFVNP010000159.1:1..4461;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000159.1 tpg gene 381 596 . - . ID=gene-L8R42_004661;Name=L8R42_004661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004661 DAFVNP010000159.1 Protein Homology CDS 381 596 . - 0 ID=cds-HBQ7392673.1;Parent=gene-L8R42_004661;Dbxref=NCBI_GP:HBQ7392673.1;Name=HBQ7392673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137421.1;locus_tag=L8R42_004661;product=MbeD family mobilization/exclusion protein;protein_id=HBQ7392673.1;transl_table=11 DAFVNP010000159.1 tpg gene 600 1085 . - . ID=gene-L8R42_004662;Name=L8R42_004662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004662 DAFVNP010000159.1 Protein Homology CDS 600 1085 . - 0 ID=cds-HBQ7392674.1;Parent=gene-L8R42_004662;Dbxref=NCBI_GP:HBQ7392674.1;Name=HBQ7392674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012565228.1;locus_tag=L8R42_004662;product=MbeB family mobilization protein;protein_id=HBQ7392674.1;transl_table=11 DAFVNP010000159.1 tpg pseudogene 1060 1824 . - . ID=gene-L8R42_004663;Name=L8R42_004663;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004663;pseudo=true DAFVNP010000159.1 Protein Homology CDS 1060 1824 . - 0 ID=cds-L8R42_004663;Parent=gene-L8R42_004663;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.1;locus_tag=L8R42_004663;product=relaxase/mobilization nuclease domain-containing protein;pseudo=true;transl_table=11 DAFVNP010000159.1 tpg gene 1763 2086 . - . ID=gene-L8R42_004664;Name=L8R42_004664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004664 DAFVNP010000159.1 Protein Homology CDS 1763 2086 . - 0 ID=cds-HBQ7392675.1;Parent=gene-L8R42_004664;Dbxref=NCBI_GP:HBQ7392675.1;Name=HBQ7392675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957083.1;locus_tag=L8R42_004664;product=MobC family plasmid mobilization relaxosome protein;protein_id=HBQ7392675.1;transl_table=11 DAFVNP010000159.1 tpg gene 2725 2838 . + . ID=gene-L8R42_004665;Name=L8R42_004665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004665 DAFVNP010000159.1 Protein Homology CDS 2725 2838 . + 0 ID=cds-HBQ7392676.1;Parent=gene-L8R42_004665;Dbxref=NCBI_GP:HBQ7392676.1;Name=HBQ7392676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007772075.1;locus_tag=L8R42_004665;product=replication initiation protein;protein_id=HBQ7392676.1;transl_table=11 DAFVNP010000159.1 tpg gene 3168 3599 . + . ID=gene-L8R42_004666;Name=L8R42_004666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004666 DAFVNP010000159.1 Protein Homology CDS 3168 3599 . + 0 ID=cds-HBQ7392677.1;Parent=gene-L8R42_004666;Dbxref=NCBI_GP:HBQ7392677.1;Name=HBQ7392677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003765864.1;locus_tag=L8R42_004666;product=hypothetical protein;protein_id=HBQ7392677.1;transl_table=11 DAFVNP010000159.1 tpg gene 3683 4012 . + . ID=gene-L8R42_004667;Name=L8R42_004667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004667 DAFVNP010000159.1 GeneMarkS-2+ CDS 3683 4012 . + 0 ID=cds-HBQ7392678.1;Parent=gene-L8R42_004667;Dbxref=NCBI_GP:HBQ7392678.1;Name=HBQ7392678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_004667;product=hypothetical protein;protein_id=HBQ7392678.1;transl_table=11 ##sequence-region DAFVNP010000160.1 1 4243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000160.1 tpg region 1 4243 . + . ID=DAFVNP010000160.1:1..4243;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000160.1 tpg gene 155 1183 . + . ID=gene-L8R42_004668;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=L8R42_004668 DAFVNP010000160.1 Protein Homology CDS 155 1183 . + 0 ID=cds-HBQ7392679.1;Parent=gene-L8R42_004668;Dbxref=NCBI_GP:HBQ7392679.1;Name=HBQ7392679.1;gbkey=CDS;gene=murB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=L8R42_004668;product=UDP-N-acetylmuramate dehydrogenase;protein_id=HBQ7392679.1;transl_table=11 DAFVNP010000160.1 tpg gene 1180 2142 . + . ID=gene-L8R42_004669;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=L8R42_004669 DAFVNP010000160.1 Protein Homology CDS 1180 2142 . + 0 ID=cds-HBQ7392680.1;Parent=gene-L8R42_004669;Dbxref=NCBI_GP:HBQ7392680.1;Name=HBQ7392680.1;gbkey=CDS;gene=birA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=L8R42_004669;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=HBQ7392680.1;transl_table=11 DAFVNP010000160.1 tpg gene 2177 3127 . - . ID=gene-L8R42_004670;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;gene_synonym=panK;locus_tag=L8R42_004670 DAFVNP010000160.1 Protein Homology CDS 2177 3127 . - 0 ID=cds-HBQ7392681.1;Parent=gene-L8R42_004670;Dbxref=NCBI_GP:HBQ7392681.1;Name=HBQ7392681.1;gbkey=CDS;gene=coaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=L8R42_004670;product=type I pantothenate kinase;protein_id=HBQ7392681.1;transl_table=11 DAFVNP010000160.1 tpg gene 3336 3509 . - . ID=gene-L8R42_004671;Name=L8R42_004671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004671 DAFVNP010000160.1 Protein Homology CDS 3336 3509 . - 0 ID=cds-HBQ7392682.1;Parent=gene-L8R42_004671;Dbxref=NCBI_GP:HBQ7392682.1;Name=HBQ7392682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=L8R42_004671;product=hypothetical protein;protein_id=HBQ7392682.1;transl_table=11 DAFVNP010000160.1 tpg gene 3529 3604 . + . ID=gene-L8R42_004672;Name=L8R42_004672;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004672 DAFVNP010000160.1 tRNAscan-SE tRNA 3529 3604 . + . ID=rna-L8R42_004672;Parent=gene-L8R42_004672;anticodon=(pos:3562..3564);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004672;product=tRNA-Thr DAFVNP010000160.1 tRNAscan-SE exon 3529 3604 . + . ID=exon-L8R42_004672-1;Parent=rna-L8R42_004672;anticodon=(pos:3562..3564);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004672;product=tRNA-Thr DAFVNP010000160.1 tpg gene 3613 3697 . + . ID=gene-L8R42_004673;Name=L8R42_004673;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004673 DAFVNP010000160.1 tRNAscan-SE tRNA 3613 3697 . + . ID=rna-L8R42_004673;Parent=gene-L8R42_004673;anticodon=(pos:3647..3649);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004673;product=tRNA-Tyr DAFVNP010000160.1 tRNAscan-SE exon 3613 3697 . + . ID=exon-L8R42_004673-1;Parent=rna-L8R42_004673;anticodon=(pos:3647..3649);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004673;product=tRNA-Tyr DAFVNP010000160.1 tpg gene 3814 3888 . + . ID=gene-L8R42_004674;Name=L8R42_004674;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004674 DAFVNP010000160.1 tRNAscan-SE tRNA 3814 3888 . + . ID=rna-L8R42_004674;Parent=gene-L8R42_004674;anticodon=(pos:3847..3849);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004674;product=tRNA-Gly DAFVNP010000160.1 tRNAscan-SE exon 3814 3888 . + . ID=exon-L8R42_004674-1;Parent=rna-L8R42_004674;anticodon=(pos:3847..3849);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004674;product=tRNA-Gly DAFVNP010000160.1 tpg gene 3895 3970 . + . ID=gene-L8R42_004675;Name=L8R42_004675;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004675 DAFVNP010000160.1 tRNAscan-SE tRNA 3895 3970 . + . ID=rna-L8R42_004675;Parent=gene-L8R42_004675;anticodon=(pos:3928..3930);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004675;product=tRNA-Thr DAFVNP010000160.1 tRNAscan-SE exon 3895 3970 . + . ID=exon-L8R42_004675-1;Parent=rna-L8R42_004675;anticodon=(pos:3928..3930);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004675;product=tRNA-Thr DAFVNP010000160.1 tpg gene 4086 4243 . + . ID=gene-L8R42_004676;Name=tuf;end_range=4243,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=L8R42_004676;partial=true DAFVNP010000160.1 Protein Homology CDS 4086 4243 . + 0 ID=cds-HBQ7392683.1;Parent=gene-L8R42_004676;Dbxref=NCBI_GP:HBQ7392683.1;Name=HBQ7392683.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;end_range=4243,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=L8R42_004676;partial=true;product=elongation factor Tu;protein_id=HBQ7392683.1;transl_table=11 ##sequence-region DAFVNP010000161.1 1 4030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000161.1 tpg region 1 4030 . + . ID=DAFVNP010000161.1:1..4030;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000161.1 tpg gene 270 1454 . - . ID=gene-L8R42_004677;Name=L8R42_004677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004677 DAFVNP010000161.1 Protein Homology CDS 270 1454 . - 0 ID=cds-HBQ7392684.1;Parent=gene-L8R42_004677;Dbxref=NCBI_GP:HBQ7392684.1;Name=HBQ7392684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=L8R42_004677;product=MFS transporter;protein_id=HBQ7392684.1;transl_table=11 DAFVNP010000161.1 tpg gene 1674 2945 . - . ID=gene-L8R42_004678;Name=L8R42_004678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004678 DAFVNP010000161.1 Protein Homology CDS 1674 2945 . - 0 ID=cds-HBQ7392685.1;Parent=gene-L8R42_004678;Dbxref=NCBI_GP:HBQ7392685.1;Name=HBQ7392685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=L8R42_004678;product=DUF445 domain-containing protein;protein_id=HBQ7392685.1;transl_table=11 DAFVNP010000161.1 tpg gene 3032 4030 . - . ID=gene-L8R42_004679;Name=L8R42_004679;end_range=4030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004679;partial=true DAFVNP010000161.1 Protein Homology CDS 3032 4030 . - 0 ID=cds-HBQ7392686.1;Parent=gene-L8R42_004679;Dbxref=NCBI_GP:HBQ7392686.1;Name=HBQ7392686.1;end_range=4030,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=L8R42_004679;partial=true;product=MFS transporter;protein_id=HBQ7392686.1;transl_table=11 ##sequence-region DAFVNP010000162.1 1 3954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000162.1 tpg region 1 3954 . + . ID=DAFVNP010000162.1:1..3954;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000162.1 tpg gene 7 2892 . + . ID=gene-L8R42_004680;Name=L8R42_004680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004680 DAFVNP010000162.1 Protein Homology CDS 7 2892 . + 0 ID=cds-HBQ7392687.1;Parent=gene-L8R42_004680;Dbxref=NCBI_GP:HBQ7392687.1;Name=HBQ7392687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138082.1;locus_tag=L8R42_004680;product=Tn3 family transposase;protein_id=HBQ7392687.1;transl_table=11 DAFVNP010000162.1 tpg gene 3492 3683 . - . ID=gene-L8R42_004681;Name=L8R42_004681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004681 DAFVNP010000162.1 Protein Homology CDS 3492 3683 . - 0 ID=cds-HBQ7392688.1;Parent=gene-L8R42_004681;Dbxref=NCBI_GP:HBQ7392688.1;Name=HBQ7392688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041614.1;locus_tag=L8R42_004681;product=Rop family plasmid primer RNA-binding protein;protein_id=HBQ7392688.1;transl_table=11 ##sequence-region DAFVNP010000163.1 1 3617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000163.1 tpg region 1 3617 . + . ID=DAFVNP010000163.1:1..3617;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000163.1 tpg gene 528 971 . + . ID=gene-L8R42_004682;Name=L8R42_004682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004682 DAFVNP010000163.1 Protein Homology CDS 528 971 . + 0 ID=cds-HBQ7392689.1;Parent=gene-L8R42_004682;Dbxref=NCBI_GP:HBQ7392689.1;Name=HBQ7392689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646715.1;locus_tag=L8R42_004682;product=hypothetical protein;protein_id=HBQ7392689.1;transl_table=11 DAFVNP010000163.1 tpg pseudogene 1362 1647 . + . ID=gene-L8R42_004683;Name=L8R42_004683;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004683;pseudo=true DAFVNP010000163.1 Protein Homology CDS 1362 1647 . + 0 ID=cds-L8R42_004683;Parent=gene-L8R42_004683;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=L8R42_004683;product=transposase;pseudo=true;transl_table=11 DAFVNP010000163.1 tpg pseudogene 1843 2774 . + . ID=gene-L8R42_004684;Name=L8R42_004684;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004684;pseudo=true DAFVNP010000163.1 Protein Homology CDS 1843 2774 . + 0 ID=cds-L8R42_004684;Parent=gene-L8R42_004684;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092682.1;locus_tag=L8R42_004684;product=hypothetical protein;pseudo=true;transl_table=11 DAFVNP010000163.1 tpg gene 2822 3550 . + . ID=gene-L8R42_004685;Name=L8R42_004685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004685 DAFVNP010000163.1 Protein Homology CDS 2822 3550 . + 0 ID=cds-HBQ7392690.1;Parent=gene-L8R42_004685;Dbxref=NCBI_GP:HBQ7392690.1;Name=HBQ7392690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012532499.1;locus_tag=L8R42_004685;product=hypothetical protein;protein_id=HBQ7392690.1;transl_table=11 ##sequence-region DAFVNP010000164.1 1 3442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000164.1 tpg region 1 3442 . + . ID=DAFVNP010000164.1:1..3442;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000164.1 tpg gene 1 173 . + . ID=gene-L8R42_004686;Name=L8R42_004686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004686;partial=true;start_range=.,1 DAFVNP010000164.1 Protein Homology CDS 1 173 . + 2 ID=cds-HBQ7392691.1;Parent=gene-L8R42_004686;Dbxref=NCBI_GP:HBQ7392691.1;Name=HBQ7392691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936591.1;locus_tag=L8R42_004686;partial=true;product=O-antigen ligase domain-containing protein;protein_id=HBQ7392691.1;start_range=.,1;transl_table=11 DAFVNP010000164.1 tpg gene 173 1183 . + . ID=gene-L8R42_004687;Name=L8R42_004687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004687 DAFVNP010000164.1 Protein Homology CDS 173 1183 . + 0 ID=cds-HBQ7392692.1;Parent=gene-L8R42_004687;Dbxref=NCBI_GP:HBQ7392692.1;Name=HBQ7392692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060530.1;locus_tag=L8R42_004687;product=glycosyltransferase family 4 protein;protein_id=HBQ7392692.1;transl_table=11 DAFVNP010000164.1 tpg gene 1170 2327 . + . ID=gene-L8R42_004688;Name=L8R42_004688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004688 DAFVNP010000164.1 Protein Homology CDS 1170 2327 . + 0 ID=cds-HBQ7392693.1;Parent=gene-L8R42_004688;Dbxref=NCBI_GP:HBQ7392693.1;Name=HBQ7392693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749599.1;locus_tag=L8R42_004688;product=glycosyltransferase family 4 protein;protein_id=HBQ7392693.1;transl_table=11 DAFVNP010000164.1 tpg gene 2342 3442 . + . ID=gene-L8R42_004689;Name=L8R42_004689;end_range=3442,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004689;partial=true DAFVNP010000164.1 Protein Homology CDS 2342 3442 . + 0 ID=cds-HBQ7392694.1;Parent=gene-L8R42_004689;Dbxref=NCBI_GP:HBQ7392694.1;Name=HBQ7392694.1;end_range=3442,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533122.1;locus_tag=L8R42_004689;partial=true;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=HBQ7392694.1;transl_table=11 ##sequence-region DAFVNP010000165.1 1 3388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000165.1 tpg region 1 3388 . + . ID=DAFVNP010000165.1:1..3388;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000165.1 tpg gene 162 1424 . + . ID=gene-L8R42_004690;Name=L8R42_004690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004690 DAFVNP010000165.1 Protein Homology CDS 162 1424 . + 0 ID=cds-HBQ7392695.1;Parent=gene-L8R42_004690;Dbxref=NCBI_GP:HBQ7392695.1;Name=HBQ7392695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219037.1;locus_tag=L8R42_004690;product=integrase arm-type DNA-binding domain-containing protein;protein_id=HBQ7392695.1;transl_table=11 DAFVNP010000165.1 tpg gene 2050 2691 . + . ID=gene-L8R42_004691;Name=L8R42_004691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004691 DAFVNP010000165.1 Protein Homology CDS 2050 2691 . + 0 ID=cds-HBQ7392696.1;Parent=gene-L8R42_004691;Dbxref=NCBI_GP:HBQ7392696.1;Name=HBQ7392696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.1;locus_tag=L8R42_004691;product=ash family protein;protein_id=HBQ7392696.1;transl_table=11 DAFVNP010000165.1 tpg gene 2688 2909 . + . ID=gene-L8R42_004692;Name=L8R42_004692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004692 DAFVNP010000165.1 Protein Homology CDS 2688 2909 . + 0 ID=cds-HBQ7392697.1;Parent=gene-L8R42_004692;Dbxref=NCBI_GP:HBQ7392697.1;Name=HBQ7392697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=L8R42_004692;product=helix-turn-helix domain-containing protein;protein_id=HBQ7392697.1;transl_table=11 ##sequence-region DAFVNP010000166.1 1 3248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000166.1 tpg region 1 3248 . + . ID=DAFVNP010000166.1:1..3248;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000166.1 tpg gene 1 496 . - . ID=gene-L8R42_004693;Name=L8R42_004693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004693;partial=true;start_range=.,1 DAFVNP010000166.1 Protein Homology CDS 1 496 . - 0 ID=cds-HBQ7392698.1;Parent=gene-L8R42_004693;Dbxref=NCBI_GP:HBQ7392698.1;Name=HBQ7392698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=L8R42_004693;partial=true;product=cupin domain-containing protein;protein_id=HBQ7392698.1;start_range=.,1;transl_table=11 DAFVNP010000166.1 tpg gene 959 1723 . + . ID=gene-L8R42_004694;Name=L8R42_004694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004694 DAFVNP010000166.1 Protein Homology CDS 959 1723 . + 0 ID=cds-HBQ7392699.1;Parent=gene-L8R42_004694;Dbxref=NCBI_GP:HBQ7392699.1;Name=HBQ7392699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=L8R42_004694;product=electron transfer flavoprotein;protein_id=HBQ7392699.1;transl_table=11 DAFVNP010000166.1 tpg gene 1745 2680 . + . ID=gene-L8R42_004695;Name=L8R42_004695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004695 DAFVNP010000166.1 Protein Homology CDS 1745 2680 . + 0 ID=cds-HBQ7392700.1;Parent=gene-L8R42_004695;Dbxref=NCBI_GP:HBQ7392700.1;Name=HBQ7392700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=L8R42_004695;product=electron transfer flavoprotein subunit alpha;protein_id=HBQ7392700.1;transl_table=11 DAFVNP010000166.1 tpg gene 2737 3248 . + . ID=gene-L8R42_004696;Name=L8R42_004696;end_range=3248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004696;partial=true DAFVNP010000166.1 Protein Homology CDS 2737 3248 . + 0 ID=cds-HBQ7392701.1;Parent=gene-L8R42_004696;Dbxref=NCBI_GP:HBQ7392701.1;Name=HBQ7392701.1;end_range=3248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=L8R42_004696;partial=true;product=FAD-dependent oxidoreductase;protein_id=HBQ7392701.1;transl_table=11 ##sequence-region DAFVNP010000167.1 1 3143 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000167.1 tpg region 1 3143 . + . ID=DAFVNP010000167.1:1..3143;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000167.1 tpg pseudogene 27 185 . + . ID=gene-L8R42_004697;Name=L8R42_004697;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004697;pseudo=true DAFVNP010000167.1 Protein Homology CDS 27 185 . + 0 ID=cds-L8R42_004697;Parent=gene-L8R42_004697;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=L8R42_004697;product=glycosyltransferase family 8 protein;pseudo=true;transl_table=11 DAFVNP010000167.1 tpg gene 306 1385 . + . ID=gene-L8R42_004698;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=L8R42_004698 DAFVNP010000167.1 Protein Homology CDS 306 1385 . + 0 ID=cds-HBQ7392702.1;Parent=gene-L8R42_004698;Dbxref=NCBI_GP:HBQ7392702.1;Name=HBQ7392702.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=L8R42_004698;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=HBQ7392702.1;transl_table=11 DAFVNP010000167.1 tpg gene 1391 2404 . + . ID=gene-L8R42_004699;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=L8R42_004699 DAFVNP010000167.1 Protein Homology CDS 1391 2404 . + 0 ID=cds-HBQ7392703.1;Parent=gene-L8R42_004699;Dbxref=NCBI_GP:HBQ7392703.1;Name=HBQ7392703.1;gbkey=CDS;gene=waaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=L8R42_004699;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=HBQ7392703.1;transl_table=11 DAFVNP010000167.1 tpg gene 2422 3143 . + . ID=gene-L8R42_004700;Name=rfaJ;end_range=3143,.;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=L8R42_004700;partial=true DAFVNP010000167.1 Protein Homology CDS 2422 3143 . + 0 ID=cds-HBQ7392704.1;Parent=gene-L8R42_004700;Dbxref=NCBI_GP:HBQ7392704.1;Name=HBQ7392704.1;end_range=3143,.;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=L8R42_004700;partial=true;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=HBQ7392704.1;transl_table=11 ##sequence-region DAFVNP010000168.1 1 2925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000168.1 tpg region 1 2925 . + . ID=DAFVNP010000168.1:1..2925;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000168.1 tpg gene 1 1304 . + . ID=gene-L8R42_004701;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=L8R42_004701;partial=true;start_range=.,1 DAFVNP010000168.1 Protein Homology CDS 1 1304 . + 2 ID=cds-HBQ7392705.1;Parent=gene-L8R42_004701;Dbxref=NCBI_GP:HBQ7392705.1;Name=HBQ7392705.1;gbkey=CDS;gene=citS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=L8R42_004701;partial=true;product=citrate/sodium symporter CitS;protein_id=HBQ7392705.1;start_range=.,1;transl_table=11 DAFVNP010000168.1 tpg gene 1463 1705 . + . ID=gene-L8R42_004702;Name=L8R42_004702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004702 DAFVNP010000168.1 Protein Homology CDS 1463 1705 . + 0 ID=cds-HBQ7392706.1;Parent=gene-L8R42_004702;Dbxref=NCBI_GP:HBQ7392706.1;Name=HBQ7392706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=L8R42_004702;product=oxaloacetate decarboxylase subunit gamma;protein_id=HBQ7392706.1;transl_table=11 DAFVNP010000168.1 tpg gene 1721 2925 . + . ID=gene-L8R42_004703;Name=oadA;end_range=2925,.;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=L8R42_004703;partial=true DAFVNP010000168.1 Protein Homology CDS 1721 2925 . + 0 ID=cds-HBQ7392707.1;Parent=gene-L8R42_004703;Dbxref=NCBI_GP:HBQ7392707.1;Name=HBQ7392707.1;end_range=2925,.;gbkey=CDS;gene=oadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=L8R42_004703;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=HBQ7392707.1;transl_table=11 ##sequence-region DAFVNP010000169.1 1 2897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000169.1 tpg region 1 2897 . + . ID=DAFVNP010000169.1:1..2897;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000169.1 tpg gene 1 505 . - . ID=gene-L8R42_004704;Name=L8R42_004704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004704;partial=true;start_range=.,1 DAFVNP010000169.1 Protein Homology CDS 1 505 . - 0 ID=cds-HBQ7392708.1;Parent=gene-L8R42_004704;Dbxref=NCBI_GP:HBQ7392708.1;Name=HBQ7392708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=L8R42_004704;partial=true;product=hypothetical protein;protein_id=HBQ7392708.1;start_range=.,1;transl_table=11 DAFVNP010000169.1 tpg gene 926 2152 . + . ID=gene-L8R42_004705;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=L8R42_004705 DAFVNP010000169.1 Protein Homology CDS 926 2152 . + 0 ID=cds-HBQ7392709.1;Parent=gene-L8R42_004705;Dbxref=NCBI_GP:HBQ7392709.1;Name=HBQ7392709.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=L8R42_004705;product=SPI-2 type III secretion system effector SseJ;protein_id=HBQ7392709.1;transl_table=11 DAFVNP010000169.1 tpg gene 2273 2617 . - . ID=gene-L8R42_004706;Name=L8R42_004706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004706 DAFVNP010000169.1 Protein Homology CDS 2273 2617 . - 0 ID=cds-HBQ7392710.1;Parent=gene-L8R42_004706;Dbxref=NCBI_GP:HBQ7392710.1;Name=HBQ7392710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=L8R42_004706;product=DUF1294 domain-containing protein;protein_id=HBQ7392710.1;transl_table=11 ##sequence-region DAFVNP010000170.1 1 2845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000170.1 tpg region 1 2845 . + . ID=DAFVNP010000170.1:1..2845;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000170.1 tpg gene 162 884 . - . ID=gene-L8R42_004707;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=L8R42_004707 DAFVNP010000170.1 Protein Homology CDS 162 884 . - 0 ID=cds-HBQ7392711.1;Parent=gene-L8R42_004707;Dbxref=NCBI_GP:HBQ7392711.1;Name=HBQ7392711.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=L8R42_004707;product=fimbria biosynthesis regulator FimY;protein_id=HBQ7392711.1;transl_table=11 DAFVNP010000170.1 tpg gene 903 1214 . - . ID=gene-L8R42_004708;Name=L8R42_004708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004708 DAFVNP010000170.1 Protein Homology CDS 903 1214 . - 0 ID=cds-HBQ7392712.1;Parent=gene-L8R42_004708;Dbxref=NCBI_GP:HBQ7392712.1;Name=HBQ7392712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=L8R42_004708;product=diguanylate cyclase;protein_id=HBQ7392712.1;transl_table=11 DAFVNP010000170.1 tpg gene 1376 1972 . - . ID=gene-L8R42_004709;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=L8R42_004709 DAFVNP010000170.1 Protein Homology CDS 1376 1972 . - 0 ID=cds-HBQ7392713.1;Parent=gene-L8R42_004709;Dbxref=NCBI_GP:HBQ7392713.1;Name=HBQ7392713.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=L8R42_004709;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=HBQ7392713.1;transl_table=11 DAFVNP010000170.1 tpg gene 2227 2303 . + . ID=gene-L8R42_004710;Name=L8R42_004710;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004710 DAFVNP010000170.1 tRNAscan-SE tRNA 2227 2303 . + . ID=rna-L8R42_004710;Parent=gene-L8R42_004710;anticodon=(pos:2261..2263);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004710;product=tRNA-Arg DAFVNP010000170.1 tRNAscan-SE exon 2227 2303 . + . ID=exon-L8R42_004710-1;Parent=rna-L8R42_004710;anticodon=(pos:2261..2263);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004710;product=tRNA-Arg DAFVNP010000170.1 tpg gene 2527 2845 . - . ID=gene-L8R42_004711;Name=L8R42_004711;end_range=2845,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004711;partial=true DAFVNP010000170.1 Protein Homology CDS 2527 2845 . - 1 ID=cds-HBQ7392714.1;Parent=gene-L8R42_004711;Dbxref=NCBI_GP:HBQ7392714.1;Name=HBQ7392714.1;end_range=2845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=L8R42_004711;partial=true;product=transposase;protein_id=HBQ7392714.1;transl_table=11 ##sequence-region DAFVNP010000171.1 1 2733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000171.1 tpg region 1 2733 . + . ID=DAFVNP010000171.1:1..2733;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000171.1 tpg gene 73 864 . - . ID=gene-L8R42_004712;Name=sul3;gbkey=Gene;gene=sul3;gene_biotype=protein_coding;locus_tag=L8R42_004712 DAFVNP010000171.1 Protein Homology CDS 73 864 . - 0 ID=cds-HBQ7392715.1;Parent=gene-L8R42_004712;Dbxref=NCBI_GP:HBQ7392715.1;Name=HBQ7392715.1;gbkey=CDS;gene=sul3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034420.1;locus_tag=L8R42_004712;product=sulfonamide-resistant dihydropteroate synthase Sul3;protein_id=HBQ7392715.1;transl_table=11 DAFVNP010000171.1 tpg gene 1333 1578 . - . ID=gene-L8R42_004713;Name=L8R42_004713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004713 DAFVNP010000171.1 Protein Homology CDS 1333 1578 . - 0 ID=cds-HBQ7392716.1;Parent=gene-L8R42_004713;Dbxref=NCBI_GP:HBQ7392716.1;Name=HBQ7392716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001354008.1;locus_tag=L8R42_004713;product=GrpB family protein;protein_id=HBQ7392716.1;transl_table=11 DAFVNP010000171.1 tpg gene 1616 2479 . - . ID=gene-L8R42_004714;Name=L8R42_004714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004714 DAFVNP010000171.1 Protein Homology CDS 1616 2479 . - 0 ID=cds-HBQ7392717.1;Parent=gene-L8R42_004714;Dbxref=NCBI_GP:HBQ7392717.1;Name=HBQ7392717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612791.1;locus_tag=L8R42_004714;product=SDR family oxidoreductase;protein_id=HBQ7392717.1;transl_table=11 DAFVNP010000171.1 tpg gene 2625 2733 . - . ID=gene-L8R42_004715;Name=L8R42_004715;end_range=2733,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004715;partial=true DAFVNP010000171.1 Protein Homology CDS 2625 2733 . - 1 ID=cds-HBQ7392718.1;Parent=gene-L8R42_004715;Dbxref=NCBI_GP:HBQ7392718.1;Name=HBQ7392718.1;end_range=2733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032492336.1;locus_tag=L8R42_004715;partial=true;product=macrolide transporter;protein_id=HBQ7392718.1;transl_table=11 ##sequence-region DAFVNP010000172.1 1 2635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000172.1 tpg region 1 2635 . + . ID=DAFVNP010000172.1:1..2635;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000172.1 tpg gene 188 901 . + . ID=gene-L8R42_004716;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=L8R42_004716 DAFVNP010000172.1 Protein Homology CDS 188 901 . + 0 ID=cds-HBQ7392719.1;Parent=gene-L8R42_004716;Dbxref=NCBI_GP:HBQ7392719.1;Name=HBQ7392719.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=L8R42_004716;product=anti-FlhDC factor YdiV;protein_id=HBQ7392719.1;transl_table=11 DAFVNP010000172.1 tpg gene 963 2405 . + . ID=gene-L8R42_004717;Name=L8R42_004717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004717 DAFVNP010000172.1 Protein Homology CDS 963 2405 . + 0 ID=cds-HBQ7392720.1;Parent=gene-L8R42_004717;Dbxref=NCBI_GP:HBQ7392720.1;Name=HBQ7392720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=L8R42_004717;product=YdiU family protein;protein_id=HBQ7392720.1;transl_table=11 DAFVNP010000172.1 tpg gene 2441 2632 . - . ID=gene-L8R42_004718;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=L8R42_004718 DAFVNP010000172.1 Protein Homology CDS 2441 2632 . - 0 ID=cds-HBQ7392721.1;Parent=gene-L8R42_004718;Dbxref=NCBI_GP:HBQ7392721.1;Name=HBQ7392721.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=L8R42_004718;product=hemin uptake protein HemP;protein_id=HBQ7392721.1;transl_table=11 ##sequence-region DAFVNP010000173.1 1 2489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000173.1 tpg region 1 2489 . + . ID=DAFVNP010000173.1:1..2489;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000173.1 tpg gene 1 1074 . - . ID=gene-L8R42_004719;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=L8R42_004719;partial=true;start_range=.,1 DAFVNP010000173.1 Protein Homology CDS 1 1074 . - 0 ID=cds-HBQ7392722.1;Parent=gene-L8R42_004719;Dbxref=NCBI_GP:HBQ7392722.1;Name=HBQ7392722.1;gbkey=CDS;gene=preA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=L8R42_004719;partial=true;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=HBQ7392722.1;start_range=.,1;transl_table=11 DAFVNP010000173.1 tpg gene 1068 2309 . - . ID=gene-L8R42_004720;Name=L8R42_004720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004720 DAFVNP010000173.1 Protein Homology CDS 1068 2309 . - 0 ID=cds-HBQ7392723.1;Parent=gene-L8R42_004720;Dbxref=NCBI_GP:HBQ7392723.1;Name=HBQ7392723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=L8R42_004720;product=NAD(P)-dependent oxidoreductase;protein_id=HBQ7392723.1;transl_table=11 ##sequence-region DAFVNP010000174.1 1 2446 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000174.1 tpg region 1 2446 . + . ID=DAFVNP010000174.1:1..2446;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000174.1 tpg gene 1 2285 . + . ID=gene-L8R42_004721;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=L8R42_004721;partial=true;start_range=.,1 DAFVNP010000174.1 Protein Homology CDS 1 2285 . + 2 ID=cds-HBQ7392724.1;Parent=gene-L8R42_004721;Dbxref=NCBI_GP:HBQ7392724.1;Name=HBQ7392724.1;gbkey=CDS;gene=nifJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=L8R42_004721;partial=true;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=HBQ7392724.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000175.1 1 2173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000175.1 tpg region 1 2173 . + . ID=DAFVNP010000175.1:1..2173;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000175.1 tpg pseudogene 6 278 . + . ID=gene-L8R42_004722;Name=L8R42_004722;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004722;pseudo=true DAFVNP010000175.1 Protein Homology CDS 6 278 . + 0 ID=cds-L8R42_004722;Parent=gene-L8R42_004722;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557972.1;locus_tag=L8R42_004722;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 DAFVNP010000175.1 tpg gene 538 954 . + . ID=gene-L8R42_004723;Name=L8R42_004723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004723 DAFVNP010000175.1 Protein Homology CDS 538 954 . + 0 ID=cds-HBQ7392725.1;Parent=gene-L8R42_004723;Dbxref=NCBI_GP:HBQ7392725.1;Name=HBQ7392725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839980.1;locus_tag=L8R42_004723;product=fosfomycin resistance glutathione transferase FosA3;protein_id=HBQ7392725.1;transl_table=11 DAFVNP010000175.1 tpg gene 959 1477 . - . ID=gene-L8R42_004724;Name=L8R42_004724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004724 DAFVNP010000175.1 Protein Homology CDS 959 1477 . - 0 ID=cds-HBQ7392726.1;Parent=gene-L8R42_004724;Dbxref=NCBI_GP:HBQ7392726.1;Name=HBQ7392726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108661.1;locus_tag=L8R42_004724;product=hypothetical protein;protein_id=HBQ7392726.1;transl_table=11 DAFVNP010000175.1 tpg gene 1477 2173 . - . ID=gene-L8R42_004725;Name=L8R42_004725;end_range=2173,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004725;partial=true DAFVNP010000175.1 Protein Homology CDS 1477 2173 . - 1 ID=cds-HBQ7392727.1;Parent=gene-L8R42_004725;Dbxref=NCBI_GP:HBQ7392727.1;Name=HBQ7392727.1;end_range=2173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012969028.1;locus_tag=L8R42_004725;partial=true;product=winged helix-turn-helix domain-containing protein;protein_id=HBQ7392727.1;transl_table=11 ##sequence-region DAFVNP010000176.1 1 2097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000176.1 tpg region 1 2097 . + . ID=DAFVNP010000176.1:1..2097;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000176.1 tpg gene 723 1712 . - . ID=gene-L8R42_004726;Name=L8R42_004726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004726 DAFVNP010000176.1 Protein Homology CDS 723 1712 . - 0 ID=cds-HBQ7392728.1;Parent=gene-L8R42_004726;Dbxref=NCBI_GP:HBQ7392728.1;Name=HBQ7392728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362017.1;locus_tag=L8R42_004726;product=protein rep;protein_id=HBQ7392728.1;transl_table=11 ##sequence-region DAFVNP010000177.1 1 1933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000177.1 tpg region 1 1933 . + . ID=DAFVNP010000177.1:1..1933;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000177.1 tpg gene 103 543 . + . ID=gene-L8R42_004727;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=L8R42_004727 DAFVNP010000177.1 Protein Homology CDS 103 543 . + 0 ID=cds-HBQ7392729.1;Parent=gene-L8R42_004727;Dbxref=NCBI_GP:HBQ7392729.1;Name=HBQ7392729.1;gbkey=CDS;gene=hpaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=L8R42_004727;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=HBQ7392729.1;transl_table=11 DAFVNP010000177.1 tpg gene 761 1933 . + . ID=gene-L8R42_004728;Name=L8R42_004728;end_range=1933,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004728;partial=true DAFVNP010000177.1 Protein Homology CDS 761 1933 . + 0 ID=cds-HBQ7392730.1;Parent=gene-L8R42_004728;Dbxref=NCBI_GP:HBQ7392730.1;Name=HBQ7392730.1;end_range=1933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=L8R42_004728;partial=true;product=Pyoverdin chromophore biosynthetic protein pvcC;protein_id=HBQ7392730.1;transl_table=11 ##sequence-region DAFVNP010000178.1 1 1929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000178.1 tpg region 1 1929 . + . ID=DAFVNP010000178.1:1..1929;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000178.1 tpg gene 145 1005 . - . ID=gene-L8R42_004729;Name=L8R42_004729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004729 DAFVNP010000178.1 Protein Homology CDS 145 1005 . - 0 ID=cds-HBQ7392731.1;Parent=gene-L8R42_004729;Dbxref=NCBI_GP:HBQ7392731.1;Name=HBQ7392731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=L8R42_004729;product=class A broad-spectrum beta-lactamase TEM-1;protein_id=HBQ7392731.1;transl_table=11 DAFVNP010000178.1 tpg gene 1187 1744 . - . ID=gene-L8R42_004730;Name=L8R42_004730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004730 DAFVNP010000178.1 Protein Homology CDS 1187 1744 . - 0 ID=cds-HBQ7392732.1;Parent=gene-L8R42_004730;Dbxref=NCBI_GP:HBQ7392732.1;Name=HBQ7392732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221001.1;locus_tag=L8R42_004730;product=recombinase family protein;protein_id=HBQ7392732.1;transl_table=11 ##sequence-region DAFVNP010000179.1 1 1818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000179.1 tpg region 1 1818 . + . ID=DAFVNP010000179.1:1..1818;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000179.1 tpg gene 366 1818 . - . ID=gene-L8R42_004731;Name=L8R42_004731;end_range=1818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004731;partial=true DAFVNP010000179.1 Protein Homology CDS 366 1818 . - 1 ID=cds-HBQ7392733.1;Parent=gene-L8R42_004731;Dbxref=NCBI_GP:HBQ7392733.1;Name=HBQ7392733.1;end_range=1818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=L8R42_004731;partial=true;product=AAA family ATPase;protein_id=HBQ7392733.1;transl_table=11 ##sequence-region DAFVNP010000180.1 1 1737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000180.1 tpg region 1 1737 . + . ID=DAFVNP010000180.1:1..1737;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000180.1 tpg gene 1 1737 . - . ID=gene-L8R42_004732;Name=pbpC;end_range=1737,.;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=L8R42_004732;partial=true;start_range=.,1 DAFVNP010000180.1 Protein Homology CDS 1 1737 . - 2 ID=cds-HBQ7392734.1;Parent=gene-L8R42_004732;Dbxref=NCBI_GP:HBQ7392734.1;Name=HBQ7392734.1;Note=penicillin-binding protein 1C;end_range=1737,.;gbkey=CDS;gene=pbpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=L8R42_004732;partial=true;product=peptidoglycan glycosyltransferase PbpC;protein_id=HBQ7392734.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000181.1 1 1732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000181.1 tpg region 1 1732 . + . ID=DAFVNP010000181.1:1..1732;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000181.1 tpg gene 63 139 . - . ID=gene-L8R42_004733;Name=L8R42_004733;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004733 DAFVNP010000181.1 tRNAscan-SE tRNA 63 139 . - . ID=rna-L8R42_004733;Parent=gene-L8R42_004733;anticodon=(pos:complement(103..105));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004733;product=tRNA-Val DAFVNP010000181.1 tRNAscan-SE exon 63 139 . - . ID=exon-L8R42_004733-1;Parent=rna-L8R42_004733;anticodon=(pos:complement(103..105));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004733;product=tRNA-Val DAFVNP010000181.1 tpg gene 291 1664 . - . ID=gene-L8R42_004734;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=L8R42_004734 DAFVNP010000181.1 Protein Homology CDS 291 1664 . - 0 ID=cds-HBQ7392735.1;Parent=gene-L8R42_004734;Dbxref=NCBI_GP:HBQ7392735.1;Name=HBQ7392735.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=L8R42_004734;product=multidrug efflux MATE transporter MdtK;protein_id=HBQ7392735.1;transl_table=11 ##sequence-region DAFVNP010000182.1 1 1643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000182.1 tpg region 1 1643 . + . ID=DAFVNP010000182.1:1..1643;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000182.1 tpg gene 1 938 . + . ID=gene-L8R42_004735;Name=L8R42_004735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004735;partial=true;start_range=.,1 DAFVNP010000182.1 Protein Homology CDS 1 938 . + 2 ID=cds-HBQ7392736.1;Parent=gene-L8R42_004735;Dbxref=NCBI_GP:HBQ7392736.1;Name=HBQ7392736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=L8R42_004735;partial=true;product=MFS transporter;protein_id=HBQ7392736.1;start_range=.,1;transl_table=11 DAFVNP010000182.1 tpg gene 985 1643 . + . ID=gene-L8R42_004736;Name=L8R42_004736;end_range=1643,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004736;partial=true DAFVNP010000182.1 Protein Homology CDS 985 1643 . + 0 ID=cds-HBQ7392737.1;Parent=gene-L8R42_004736;Dbxref=NCBI_GP:HBQ7392737.1;Name=HBQ7392737.1;end_range=1643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=L8R42_004736;partial=true;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=HBQ7392737.1;transl_table=11 ##sequence-region DAFVNP010000183.1 1 1553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000183.1 tpg region 1 1553 . + . ID=DAFVNP010000183.1:1..1553;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000183.1 tpg gene 65 1519 . - . ID=gene-L8R42_004737;Name=L8R42_004737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004737 DAFVNP010000183.1 Protein Homology CDS 65 1519 . - 0 ID=cds-HBQ7392738.1;Parent=gene-L8R42_004737;Dbxref=NCBI_GP:HBQ7392738.1;Name=HBQ7392738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=L8R42_004737;product=putative allantoin permease;protein_id=HBQ7392738.1;transl_table=11 ##sequence-region DAFVNP010000184.1 1 1420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000184.1 tpg region 1 1420 . + . ID=DAFVNP010000184.1:1..1420;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000184.1 tpg gene 1 649 . + . ID=gene-L8R42_004738;Name=L8R42_004738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004738;partial=true;start_range=.,1 DAFVNP010000184.1 Protein Homology CDS 1 649 . + 1 ID=cds-HBQ7392739.1;Parent=gene-L8R42_004738;Dbxref=NCBI_GP:HBQ7392739.1;Name=HBQ7392739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=L8R42_004738;partial=true;product=IS5-like element IS903B family transposase;protein_id=HBQ7392739.1;start_range=.,1;transl_table=11 DAFVNP010000184.1 tpg pseudogene 706 912 . - . ID=gene-L8R42_004739;Name=L8R42_004739;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004739;pseudo=true DAFVNP010000184.1 Protein Homology CDS 706 912 . - 0 ID=cds-L8R42_004739;Parent=gene-L8R42_004739;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558163.1;locus_tag=L8R42_004739;product=transposase;pseudo=true;transl_table=11 DAFVNP010000184.1 tpg gene 943 1420 . - . ID=gene-L8R42_004740;Name=L8R42_004740;end_range=1420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004740;partial=true DAFVNP010000184.1 Protein Homology CDS 943 1420 . - 1 ID=cds-HBQ7392740.1;Parent=gene-L8R42_004740;Dbxref=NCBI_GP:HBQ7392740.1;Name=HBQ7392740.1;end_range=1420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904896.1;locus_tag=L8R42_004740;partial=true;product=recombinase family protein;protein_id=HBQ7392740.1;transl_table=11 ##sequence-region DAFVNP010000185.1 1 1406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000185.1 tpg region 1 1406 . + . ID=DAFVNP010000185.1:1..1406;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000185.1 tpg gene 1 360 . + . ID=gene-L8R42_004741;Name=L8R42_004741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004741;partial=true;start_range=.,1 DAFVNP010000185.1 Protein Homology CDS 1 360 . + 0 ID=cds-HBQ7392741.1;Parent=gene-L8R42_004741;Dbxref=NCBI_GP:HBQ7392741.1;Name=HBQ7392741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=L8R42_004741;partial=true;product=cytoplasmic protein;protein_id=HBQ7392741.1;start_range=.,1;transl_table=11 DAFVNP010000185.1 tpg gene 418 1311 . + . ID=gene-L8R42_004742;Name=L8R42_004742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004742 DAFVNP010000185.1 Protein Homology CDS 418 1311 . + 0 ID=cds-HBQ7392742.1;Parent=gene-L8R42_004742;Dbxref=NCBI_GP:HBQ7392742.1;Name=HBQ7392742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=L8R42_004742;product=proline iminopeptidase-family hydrolase;protein_id=HBQ7392742.1;transl_table=11 ##sequence-region DAFVNP010000186.1 1 1373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000186.1 tpg region 1 1373 . + . ID=DAFVNP010000186.1:1..1373;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000186.1 tpg gene 1 762 . + . ID=gene-L8R42_004743;Name=L8R42_004743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004743;partial=true;start_range=.,1 DAFVNP010000186.1 Protein Homology CDS 1 762 . + 0 ID=cds-HBQ7392743.1;Parent=gene-L8R42_004743;Dbxref=NCBI_GP:HBQ7392743.1;Name=HBQ7392743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=L8R42_004743;partial=true;product=biotin/lipoyl-binding protein;protein_id=HBQ7392743.1;start_range=.,1;transl_table=11 DAFVNP010000186.1 tpg gene 775 1373 . + . ID=gene-L8R42_004744;Name=L8R42_004744;end_range=1373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004744;partial=true DAFVNP010000186.1 Protein Homology CDS 775 1373 . + 0 ID=cds-HBQ7392744.1;Parent=gene-L8R42_004744;Dbxref=NCBI_GP:HBQ7392744.1;Name=HBQ7392744.1;end_range=1373,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=L8R42_004744;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=HBQ7392744.1;transl_table=11 ##sequence-region DAFVNP010000187.1 1 1357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000187.1 tpg region 1 1357 . + . ID=DAFVNP010000187.1:1..1357;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000187.1 tpg gene 10 1068 . - . ID=gene-L8R42_004745;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=L8R42_004745 DAFVNP010000187.1 Protein Homology CDS 10 1068 . - 0 ID=cds-HBQ7392745.1;Parent=gene-L8R42_004745;Dbxref=NCBI_GP:HBQ7392745.1;Name=HBQ7392745.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=L8R42_004745;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=HBQ7392745.1;transl_table=11 DAFVNP010000187.1 tpg gene 1065 1357 . - . ID=gene-L8R42_004746;Name=ssaT;end_range=1357,.;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=L8R42_004746;partial=true DAFVNP010000187.1 Protein Homology CDS 1065 1357 . - 2 ID=cds-HBQ7392746.1;Parent=gene-L8R42_004746;Dbxref=NCBI_GP:HBQ7392746.1;Name=HBQ7392746.1;end_range=1357,.;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=L8R42_004746;partial=true;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=HBQ7392746.1;transl_table=11 ##sequence-region DAFVNP010000188.1 1 1223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000188.1 tpg region 1 1223 . + . ID=DAFVNP010000188.1:1..1223;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000188.1 tpg gene 310 795 . + . ID=gene-L8R42_004747;Name=L8R42_004747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004747 DAFVNP010000188.1 Protein Homology CDS 310 795 . + 0 ID=cds-HBQ7392747.1;Parent=gene-L8R42_004747;Dbxref=NCBI_GP:HBQ7392747.1;Name=HBQ7392747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=L8R42_004747;product=type VI secretion system amidase effector protein Tae4;protein_id=HBQ7392747.1;transl_table=11 DAFVNP010000188.1 tpg gene 780 1163 . + . ID=gene-L8R42_004748;Name=L8R42_004748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004748 DAFVNP010000188.1 Protein Homology CDS 780 1163 . + 0 ID=cds-HBQ7392748.1;Parent=gene-L8R42_004748;Dbxref=NCBI_GP:HBQ7392748.1;Name=HBQ7392748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=L8R42_004748;product=type VI secretion system amidase immunity protein Tai4;protein_id=HBQ7392748.1;transl_table=11 ##sequence-region DAFVNP010000189.1 1 1203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000189.1 tpg region 1 1203 . + . ID=DAFVNP010000189.1:1..1203;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000189.1 tpg gene 517 1203 . + . ID=gene-L8R42_004749;Name=L8R42_004749;end_range=1203,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004749;partial=true DAFVNP010000189.1 Protein Homology CDS 517 1203 . + 0 ID=cds-HBQ7392749.1;Parent=gene-L8R42_004749;Dbxref=NCBI_GP:HBQ7392749.1;Name=HBQ7392749.1;end_range=1203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=L8R42_004749;partial=true;product=hypothetical protein;protein_id=HBQ7392749.1;transl_table=11 ##sequence-region DAFVNP010000190.1 1 1175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000190.1 tpg region 1 1175 . + . ID=DAFVNP010000190.1:1..1175;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000190.1 tpg gene 248 1123 . + . ID=gene-L8R42_004750;Name=blaCTX-M;gbkey=Gene;gene=blaCTX-M;gene_biotype=protein_coding;locus_tag=L8R42_004750 DAFVNP010000190.1 Protein Homology CDS 248 1123 . + 0 ID=cds-HBQ7392750.1;Parent=gene-L8R42_004750;Dbxref=NCBI_GP:HBQ7392750.1;Name=HBQ7392750.1;gbkey=CDS;gene=blaCTX-M;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032492044.1;locus_tag=L8R42_004750;product=CTX-M family class A extended-spectrum beta-lactamase;protein_id=HBQ7392750.1;transl_table=11 ##sequence-region DAFVNP010000191.1 1 1119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000191.1 tpg region 1 1119 . + . ID=DAFVNP010000191.1:1..1119;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000191.1 tpg gene 1 169 . - . ID=gene-L8R42_004751;Name=L8R42_004751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004751;partial=true;start_range=.,1 DAFVNP010000191.1 Protein Homology CDS 1 169 . - 0 ID=cds-HBQ7392751.1;Parent=gene-L8R42_004751;Dbxref=NCBI_GP:HBQ7392751.1;Name=HBQ7392751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311122.1;locus_tag=L8R42_004751;partial=true;product=twin-arginine translocation signal domain-containing protein;protein_id=HBQ7392751.1;start_range=.,1;transl_table=11 DAFVNP010000191.1 tpg gene 166 429 . - . ID=gene-L8R42_004752;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=L8R42_004752 DAFVNP010000191.1 Protein Homology CDS 166 429 . - 0 ID=cds-HBQ7392752.1;Parent=gene-L8R42_004752;Dbxref=NCBI_GP:HBQ7392752.1;Name=HBQ7392752.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=L8R42_004752;product=chaperone NapD;protein_id=HBQ7392752.1;transl_table=11 DAFVNP010000191.1 tpg gene 419 910 . - . ID=gene-L8R42_004753;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=L8R42_004753 DAFVNP010000191.1 Protein Homology CDS 419 910 . - 0 ID=cds-HBQ7392753.1;Parent=gene-L8R42_004753;Dbxref=NCBI_GP:HBQ7392753.1;Name=HBQ7392753.1;gbkey=CDS;gene=napF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=L8R42_004753;product=ferredoxin-type protein NapF;protein_id=HBQ7392753.1;transl_table=11 ##sequence-region DAFVNP010000192.1 1 1031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000192.1 tpg region 1 1031 . + . ID=DAFVNP010000192.1:1..1031;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000192.1 tpg gene 1 1031 . + . ID=gene-L8R42_004754;Name=L8R42_004754;end_range=1031,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L8R42_004754;partial=true;start_range=.,1 DAFVNP010000192.1 cmsearch rRNA 1 1031 . + . ID=rna-L8R42_004754;Parent=gene-L8R42_004754;Dbxref=RFAM:RF00177;end_range=1031,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004754;partial=true;product=16S ribosomal RNA;start_range=.,1 DAFVNP010000192.1 cmsearch exon 1 1031 . + . ID=exon-L8R42_004754-1;Parent=rna-L8R42_004754;Dbxref=RFAM:RF00177;end_range=1031,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004754;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region DAFVNP010000193.1 1 995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000193.1 tpg region 1 995 . + . ID=DAFVNP010000193.1:1..995;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000193.1 tpg gene 119 631 . - . ID=gene-L8R42_004755;Name=L8R42_004755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004755 DAFVNP010000193.1 Protein Homology CDS 119 631 . - 0 ID=cds-HBQ7392754.1;Parent=gene-L8R42_004755;Dbxref=NCBI_GP:HBQ7392754.1;Name=HBQ7392754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=L8R42_004755;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=HBQ7392754.1;transl_table=11 DAFVNP010000193.1 tpg gene 649 995 . - . ID=gene-L8R42_004756;Name=L8R42_004756;end_range=995,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004756;partial=true DAFVNP010000193.1 Protein Homology CDS 649 995 . - 2 ID=cds-HBQ7392755.1;Parent=gene-L8R42_004756;Dbxref=NCBI_GP:HBQ7392755.1;Name=HBQ7392755.1;end_range=995,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=L8R42_004756;partial=true;product=Pyoverdin chromophore biosynthetic protein pvcC;protein_id=HBQ7392755.1;transl_table=11 ##sequence-region DAFVNP010000194.1 1 946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000194.1 tpg region 1 946 . + . ID=DAFVNP010000194.1:1..946;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000194.1 tpg gene 494 871 . + . ID=gene-L8R42_004757;Name=L8R42_004757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004757 DAFVNP010000194.1 Protein Homology CDS 494 871 . + 0 ID=cds-HBQ7392756.1;Parent=gene-L8R42_004757;Dbxref=NCBI_GP:HBQ7392756.1;Name=HBQ7392756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535855.1;locus_tag=L8R42_004757;product=integrase;protein_id=HBQ7392756.1;transl_table=11 ##sequence-region DAFVNP010000195.1 1 869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000195.1 tpg region 1 869 . + . ID=DAFVNP010000195.1:1..869;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000195.1 tpg gene 1 869 . + . ID=gene-L8R42_004758;Name=L8R42_004758;end_range=869,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004758;partial=true;start_range=.,1 DAFVNP010000195.1 Protein Homology CDS 1 869 . + 0 ID=cds-HBQ7392757.1;Parent=gene-L8R42_004758;Dbxref=NCBI_GP:HBQ7392757.1;Name=HBQ7392757.1;end_range=869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=L8R42_004758;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=HBQ7392757.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000196.1 1 847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000196.1 tpg region 1 847 . + . ID=DAFVNP010000196.1:1..847;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000196.1 tpg gene 1 847 . + . ID=gene-L8R42_004759;Name=L8R42_004759;end_range=847,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004759;partial=true;start_range=.,1 DAFVNP010000196.1 Protein Homology CDS 1 847 . + 0 ID=cds-HBQ7392758.1;Parent=gene-L8R42_004759;Dbxref=NCBI_GP:HBQ7392758.1;Name=HBQ7392758.1;end_range=847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=L8R42_004759;partial=true;product=Ig-like domain repeat protein;protein_id=HBQ7392758.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000197.1 1 845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000197.1 tpg region 1 845 . + . ID=DAFVNP010000197.1:1..845;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000197.1 tpg gene 1 162 . - . ID=gene-L8R42_004760;Name=L8R42_004760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004760;partial=true;start_range=.,1 DAFVNP010000197.1 Protein Homology CDS 1 162 . - 0 ID=cds-HBQ7392759.1;Parent=gene-L8R42_004760;Dbxref=NCBI_GP:HBQ7392759.1;Name=HBQ7392759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=L8R42_004760;partial=true;product=fimbria/pilus periplasmic chaperone;protein_id=HBQ7392759.1;start_range=.,1;transl_table=11 DAFVNP010000197.1 tpg gene 247 771 . - . ID=gene-L8R42_004761;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=L8R42_004761 DAFVNP010000197.1 Protein Homology CDS 247 771 . - 0 ID=cds-HBQ7392760.1;Parent=gene-L8R42_004761;Dbxref=NCBI_GP:HBQ7392760.1;Name=HBQ7392760.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=L8R42_004761;product=long polar fimbria major subunit LpfA;protein_id=HBQ7392760.1;transl_table=11 ##sequence-region DAFVNP010000198.1 1 778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000198.1 tpg region 1 778 . + . ID=DAFVNP010000198.1:1..778;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000198.1 tpg gene 32 736 . - . ID=gene-L8R42_004762;Name=L8R42_004762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004762 DAFVNP010000198.1 Protein Homology CDS 32 736 . - 0 ID=cds-HBQ7392761.1;Parent=gene-L8R42_004762;Dbxref=NCBI_GP:HBQ7392761.1;Name=HBQ7392761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=L8R42_004762;product=IS6-like element IS26 family transposase;protein_id=HBQ7392761.1;transl_table=11 ##sequence-region DAFVNP010000199.1 1 672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000199.1 tpg region 1 672 . + . ID=DAFVNP010000199.1:1..672;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000199.1 tpg gene 1 672 . + . ID=gene-L8R42_004763;Name=L8R42_004763;end_range=672,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004763;partial=true;start_range=.,1 DAFVNP010000199.1 Protein Homology CDS 1 672 . + 2 ID=cds-HBQ7392762.1;Parent=gene-L8R42_004763;Dbxref=NCBI_GP:HBQ7392762.1;Name=HBQ7392762.1;Note=cytochrome c-type biogenesis protein%3B involved in the attachment of heme to cytochrome c;end_range=672,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=L8R42_004763;partial=true;product=cytochrome c biogenesis protein CcmH;protein_id=HBQ7392762.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000200.1 1 668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000200.1 tpg region 1 668 . + . ID=DAFVNP010000200.1:1..668;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000200.1 tpg gene 1 668 . + . ID=gene-L8R42_004764;Name=L8R42_004764;end_range=668,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004764;partial=true;start_range=.,1 DAFVNP010000200.1 Protein Homology CDS 1 668 . + 0 ID=cds-HBQ7392763.1;Parent=gene-L8R42_004764;Dbxref=NCBI_GP:HBQ7392763.1;Name=HBQ7392763.1;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes;end_range=668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079789.1;locus_tag=L8R42_004764;partial=true;product=flagellin FliC;protein_id=HBQ7392763.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000201.1 1 663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000201.1 tpg region 1 663 . + . ID=DAFVNP010000201.1:1..663;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000201.1 tpg gene 288 663 . + . ID=gene-L8R42_004765;Name=L8R42_004765;end_range=663,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004765;partial=true DAFVNP010000201.1 Protein Homology CDS 288 663 . + 0 ID=cds-HBQ7392764.1;Parent=gene-L8R42_004765;Dbxref=NCBI_GP:HBQ7392764.1;Name=HBQ7392764.1;end_range=663,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=L8R42_004765;partial=true;product=hypothetical protein;protein_id=HBQ7392764.1;transl_table=11 ##sequence-region DAFVNP010000202.1 1 646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000202.1 tpg region 1 646 . + . ID=DAFVNP010000202.1:1..646;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000202.1 tpg gene 1 646 . + . ID=gene-L8R42_004766;Name=L8R42_004766;end_range=646,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L8R42_004766;partial=true;start_range=.,1 DAFVNP010000202.1 cmsearch rRNA 1 646 . + . ID=rna-L8R42_004766;Parent=gene-L8R42_004766;Dbxref=RFAM:RF02541;end_range=646,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004766;partial=true;product=23S ribosomal RNA;start_range=.,1 DAFVNP010000202.1 cmsearch exon 1 646 . + . ID=exon-L8R42_004766-1;Parent=rna-L8R42_004766;Dbxref=RFAM:RF02541;end_range=646,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004766;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DAFVNP010000203.1 1 618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000203.1 tpg region 1 618 . + . ID=DAFVNP010000203.1:1..618;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000203.1 tpg gene 142 618 . - . ID=gene-L8R42_004767;Name=L8R42_004767;end_range=618,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004767;partial=true DAFVNP010000203.1 Protein Homology CDS 142 618 . - 0 ID=cds-HBQ7392765.1;Parent=gene-L8R42_004767;Dbxref=NCBI_GP:HBQ7392765.1;Name=HBQ7392765.1;end_range=618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460673.1;locus_tag=L8R42_004767;partial=true;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=HBQ7392765.1;transl_table=11 ##sequence-region DAFVNP010000204.1 1 615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000204.1 tpg region 1 615 . + . ID=DAFVNP010000204.1:1..615;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000204.1 tpg gene 1 615 . + . ID=gene-L8R42_004768;Name=L8R42_004768;end_range=615,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004768;partial=true;start_range=.,1 DAFVNP010000204.1 Protein Homology CDS 1 615 . + 2 ID=cds-HBQ7392766.1;Parent=gene-L8R42_004768;Dbxref=NCBI_GP:HBQ7392766.1;Name=HBQ7392766.1;end_range=615,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=L8R42_004768;partial=true;product=Tn3 family transposase;protein_id=HBQ7392766.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000205.1 1 548 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000205.1 tpg region 1 548 . + . ID=DAFVNP010000205.1:1..548;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000205.1 tpg gene 1 548 . - . ID=gene-L8R42_004769;Name=intI1;end_range=548,.;gbkey=Gene;gene=intI1;gene_biotype=protein_coding;locus_tag=L8R42_004769;partial=true;start_range=.,1 DAFVNP010000205.1 Protein Homology CDS 1 548 . - 2 ID=cds-HBQ7392767.1;Parent=gene-L8R42_004769;Dbxref=NCBI_GP:HBQ7392767.1;Name=HBQ7392767.1;end_range=548,.;gbkey=CDS;gene=intI1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221021.1;locus_tag=L8R42_004769;partial=true;product=class 1 integron integrase IntI1;protein_id=HBQ7392767.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000206.1 1 543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000206.1 tpg region 1 543 . + . ID=DAFVNP010000206.1:1..543;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000206.1 tpg gene 1 543 . + . ID=gene-L8R42_004770;Name=L8R42_004770;end_range=543,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L8R42_004770;partial=true;start_range=.,1 DAFVNP010000206.1 cmsearch rRNA 1 543 . + . ID=rna-L8R42_004770;Parent=gene-L8R42_004770;Dbxref=RFAM:RF02541;end_range=543,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004770;partial=true;product=23S ribosomal RNA;start_range=.,1 DAFVNP010000206.1 cmsearch exon 1 543 . + . ID=exon-L8R42_004770-1;Parent=rna-L8R42_004770;Dbxref=RFAM:RF02541;end_range=543,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004770;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DAFVNP010000207.1 1 511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000207.1 tpg region 1 511 . + . ID=DAFVNP010000207.1:1..511;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000207.1 tpg pseudogene 141 212 . + . ID=gene-L8R42_004771;Name=L8R42_004771;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004771;pseudo=true DAFVNP010000207.1 Protein Homology CDS 141 212 . + 0 ID=cds-L8R42_004771;Parent=gene-L8R42_004771;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461632.1;locus_tag=L8R42_004771;product=tail fiber assembly protein;pseudo=true;transl_table=11 ##sequence-region DAFVNP010000208.1 1 497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000208.1 tpg region 1 497 . + . ID=DAFVNP010000208.1:1..497;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000208.1 tpg gene 1 497 . + . ID=gene-L8R42_004772;Name=tuf;end_range=497,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=L8R42_004772;partial=true;start_range=.,1 DAFVNP010000208.1 Protein Homology CDS 1 497 . + 0 ID=cds-HBQ7392768.1;Parent=gene-L8R42_004772;Dbxref=NCBI_GP:HBQ7392768.1;Name=HBQ7392768.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;end_range=497,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=L8R42_004772;partial=true;product=elongation factor Tu;protein_id=HBQ7392768.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000209.1 1 463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000209.1 tpg region 1 463 . + . ID=DAFVNP010000209.1:1..463;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000209.1 tpg gene 1 399 . - . ID=gene-L8R42_004773;Name=L8R42_004773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004773;partial=true;start_range=.,1 DAFVNP010000209.1 Protein Homology CDS 1 399 . - 0 ID=cds-HBQ7392769.1;Parent=gene-L8R42_004773;Dbxref=NCBI_GP:HBQ7392769.1;Name=HBQ7392769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502176.1;locus_tag=L8R42_004773;partial=true;product=hypothetical protein;protein_id=HBQ7392769.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000210.1 1 444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000210.1 tpg region 1 444 . + . ID=DAFVNP010000210.1:1..444;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000210.1 tpg pseudogene 18 444 . + . ID=gene-L8R42_004774;Name=L8R42_004774;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L8R42_004774;pseudo=true DAFVNP010000210.1 Protein Homology CDS 18 444 . + 0 ID=cds-L8R42_004774;Parent=gene-L8R42_004774;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=L8R42_004774;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11 ##sequence-region DAFVNP010000211.1 1 432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000211.1 tpg region 1 432 . + . ID=DAFVNP010000211.1:1..432;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000211.1 tpg gene 1 432 . + . ID=gene-L8R42_004775;Name=L8R42_004775;end_range=432,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L8R42_004775;partial=true;start_range=.,1 DAFVNP010000211.1 cmsearch rRNA 1 432 . + . ID=rna-L8R42_004775;Parent=gene-L8R42_004775;Dbxref=RFAM:RF02541;end_range=432,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004775;partial=true;product=23S ribosomal RNA;start_range=.,1 DAFVNP010000211.1 cmsearch exon 1 432 . + . ID=exon-L8R42_004775-1;Parent=rna-L8R42_004775;Dbxref=RFAM:RF02541;end_range=432,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004775;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DAFVNP010000212.1 1 360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000212.1 tpg region 1 360 . + . ID=DAFVNP010000212.1:1..360;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000212.1 tpg gene 1 360 . + . ID=gene-L8R42_004776;Name=L8R42_004776;end_range=360,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L8R42_004776;partial=true;start_range=.,1 DAFVNP010000212.1 cmsearch rRNA 1 360 . + . ID=rna-L8R42_004776;Parent=gene-L8R42_004776;Dbxref=RFAM:RF02541;end_range=360,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004776;partial=true;product=23S ribosomal RNA;start_range=.,1 DAFVNP010000212.1 cmsearch exon 1 360 . + . ID=exon-L8R42_004776-1;Parent=rna-L8R42_004776;Dbxref=RFAM:RF02541;end_range=360,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004776;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DAFVNP010000213.1 1 340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000213.1 tpg region 1 340 . + . ID=DAFVNP010000213.1:1..340;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000213.1 tpg gene 20 96 . + . ID=gene-L8R42_004777;Name=L8R42_004777;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004777 DAFVNP010000213.1 tRNAscan-SE tRNA 20 96 . + . ID=rna-L8R42_004777;Parent=gene-L8R42_004777;anticodon=(pos:54..56);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004777;product=tRNA-Ile DAFVNP010000213.1 tRNAscan-SE exon 20 96 . + . ID=exon-L8R42_004777-1;Parent=rna-L8R42_004777;anticodon=(pos:54..56);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004777;product=tRNA-Ile DAFVNP010000213.1 tpg gene 206 281 . + . ID=gene-L8R42_004778;Name=L8R42_004778;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004778 DAFVNP010000213.1 tRNAscan-SE tRNA 206 281 . + . ID=rna-L8R42_004778;Parent=gene-L8R42_004778;anticodon=(pos:239..241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004778;product=tRNA-Ala DAFVNP010000213.1 tRNAscan-SE exon 206 281 . + . ID=exon-L8R42_004778-1;Parent=rna-L8R42_004778;anticodon=(pos:239..241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004778;product=tRNA-Ala ##sequence-region DAFVNP010000214.1 1 333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000214.1 tpg region 1 333 . + . ID=DAFVNP010000214.1:1..333;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000214.1 tpg gene 130 205 . + . ID=gene-L8R42_004779;Name=L8R42_004779;gbkey=Gene;gene_biotype=tRNA;locus_tag=L8R42_004779 DAFVNP010000214.1 tRNAscan-SE tRNA 130 205 . + . ID=rna-L8R42_004779;Parent=gene-L8R42_004779;anticodon=(pos:163..165);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004779;product=tRNA-Lys DAFVNP010000214.1 tRNAscan-SE exon 130 205 . + . ID=exon-L8R42_004779-1;Parent=rna-L8R42_004779;anticodon=(pos:163..165);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=L8R42_004779;product=tRNA-Lys ##sequence-region DAFVNP010000215.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000215.1 tpg region 1 324 . + . ID=DAFVNP010000215.1:1..324;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000215.1 tpg gene 1 324 . + . ID=gene-L8R42_004780;Name=L8R42_004780;end_range=324,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L8R42_004780;partial=true;start_range=.,1 DAFVNP010000215.1 cmsearch rRNA 1 324 . + . ID=rna-L8R42_004780;Parent=gene-L8R42_004780;Dbxref=RFAM:RF00177;end_range=324,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004780;partial=true;product=16S ribosomal RNA;start_range=.,1 DAFVNP010000215.1 cmsearch exon 1 324 . + . ID=exon-L8R42_004780-1;Parent=rna-L8R42_004780;Dbxref=RFAM:RF00177;end_range=324,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=L8R42_004780;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region DAFVNP010000216.1 1 312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000216.1 tpg region 1 312 . + . ID=DAFVNP010000216.1:1..312;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000216.1 tpg gene 1 312 . + . ID=gene-L8R42_004781;Name=L8R42_004781;end_range=312,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004781;partial=true;start_range=.,1 DAFVNP010000216.1 GeneMarkS-2+ CDS 1 312 . + 1 ID=cds-HBQ7392770.1;Parent=gene-L8R42_004781;Dbxref=NCBI_GP:HBQ7392770.1;Name=HBQ7392770.1;end_range=312,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L8R42_004781;partial=true;product=hypothetical protein;protein_id=HBQ7392770.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000217.1 1 303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000217.1 tpg region 1 303 . + . ID=DAFVNP010000217.1:1..303;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000217.1 tpg gene 1 303 . + . ID=gene-L8R42_004782;Name=L8R42_004782;end_range=303,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004782;partial=true;start_range=.,1 DAFVNP010000217.1 Protein Homology CDS 1 303 . + 2 ID=cds-HBQ7392771.1;Parent=gene-L8R42_004782;Dbxref=NCBI_GP:HBQ7392771.1;Name=HBQ7392771.1;end_range=303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=L8R42_004782;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=HBQ7392771.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000218.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000218.1 tpg region 1 292 . + . ID=DAFVNP010000218.1:1..292;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica ##sequence-region DAFVNP010000219.1 1 2331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000219.1 tpg region 1 2331 . + . ID=DAFVNP010000219.1:1..2331;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000219.1 tpg gene 6 1265 . + . ID=gene-L8R42_004783;Name=L8R42_004783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004783 DAFVNP010000219.1 Protein Homology CDS 6 1265 . + 0 ID=cds-HBQ7392772.1;Parent=gene-L8R42_004783;Dbxref=NCBI_GP:HBQ7392772.1;Name=HBQ7392772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001256773.1;locus_tag=L8R42_004783;product=chloramphenicol efflux MFS transporter CmlA1;protein_id=HBQ7392772.1;transl_table=11 DAFVNP010000219.1 tpg gene 1358 2149 . + . ID=gene-L8R42_004784;Name=aadA1;gbkey=Gene;gene=aadA1;gene_biotype=protein_coding;locus_tag=L8R42_004784 DAFVNP010000219.1 Protein Homology CDS 1358 2149 . + 0 ID=cds-HBQ7392773.1;Parent=gene-L8R42_004784;Dbxref=NCBI_GP:HBQ7392773.1;Name=HBQ7392773.1;gbkey=CDS;gene=aadA1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014325834.1;locus_tag=L8R42_004784;product=ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1;protein_id=HBQ7392773.1;transl_table=11 ##sequence-region DAFVNP010000220.1 1 1960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000220.1 tpg region 1 1960 . + . ID=DAFVNP010000220.1:1..1960;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000220.1 tpg gene 1 569 . - . ID=gene-L8R42_004785;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=protein_coding;locus_tag=L8R42_004785;partial=true;start_range=.,1 DAFVNP010000220.1 Protein Homology CDS 1 569 . - 0 ID=cds-HBQ7392774.1;Parent=gene-L8R42_004785;Dbxref=NCBI_GP:HBQ7392774.1;Name=HBQ7392774.1;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=L8R42_004785;partial=true;product=tetracycline resistance transcriptional repressor TetR(A);protein_id=HBQ7392774.1;start_range=.,1;transl_table=11 DAFVNP010000220.1 tpg gene 675 1874 . + . ID=gene-L8R42_004786;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=protein_coding;locus_tag=L8R42_004786 DAFVNP010000220.1 Protein Homology CDS 675 1874 . + 0 ID=cds-HBQ7392775.1;Parent=gene-L8R42_004786;Dbxref=NCBI_GP:HBQ7392775.1;Name=HBQ7392775.1;gbkey=CDS;gene=tet(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804064.1;locus_tag=L8R42_004786;product=tetracycline efflux MFS transporter Tet(A);protein_id=HBQ7392775.1;transl_table=11 ##sequence-region DAFVNP010000221.1 1 1592 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000221.1 tpg region 1 1592 . + . ID=DAFVNP010000221.1:1..1592;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000221.1 tpg gene 299 715 . + . ID=gene-L8R42_004787;Name=L8R42_004787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004787 DAFVNP010000221.1 Protein Homology CDS 299 715 . + 0 ID=cds-HBQ7392776.1;Parent=gene-L8R42_004787;Dbxref=NCBI_GP:HBQ7392776.1;Name=HBQ7392776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839980.1;locus_tag=L8R42_004787;product=fosfomycin resistance glutathione transferase FosA3;protein_id=HBQ7392776.1;transl_table=11 DAFVNP010000221.1 tpg gene 720 1238 . - . ID=gene-L8R42_004788;Name=L8R42_004788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004788 DAFVNP010000221.1 Protein Homology CDS 720 1238 . - 0 ID=cds-HBQ7392777.1;Parent=gene-L8R42_004788;Dbxref=NCBI_GP:HBQ7392777.1;Name=HBQ7392777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108661.1;locus_tag=L8R42_004788;product=hypothetical protein;protein_id=HBQ7392777.1;transl_table=11 DAFVNP010000221.1 tpg gene 1238 1592 . - . ID=gene-L8R42_004789;Name=L8R42_004789;end_range=1592,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004789;partial=true DAFVNP010000221.1 Protein Homology CDS 1238 1592 . - 1 ID=cds-HBQ7392778.1;Parent=gene-L8R42_004789;Dbxref=NCBI_GP:HBQ7392778.1;Name=HBQ7392778.1;end_range=1592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110280.1;locus_tag=L8R42_004789;partial=true;product=winged helix family transcriptional regulator;protein_id=HBQ7392778.1;transl_table=11 ##sequence-region DAFVNP010000222.1 1 1584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000222.1 tpg region 1 1584 . + . ID=DAFVNP010000222.1:1..1584;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000222.1 tpg gene 1 197 . + . ID=gene-L8R42_004790;Name=L8R42_004790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004790;partial=true;start_range=.,1 DAFVNP010000222.1 Protein Homology CDS 1 197 . + 2 ID=cds-HBQ7392779.1;Parent=gene-L8R42_004790;Dbxref=NCBI_GP:HBQ7392779.1;Name=HBQ7392779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=L8R42_004790;partial=true;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=HBQ7392779.1;start_range=.,1;transl_table=11 DAFVNP010000222.1 tpg gene 197 1033 . + . ID=gene-L8R42_004791;Name=L8R42_004791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004791 DAFVNP010000222.1 Protein Homology CDS 197 1033 . + 0 ID=cds-HBQ7392780.1;Parent=gene-L8R42_004791;Dbxref=NCBI_GP:HBQ7392780.1;Name=HBQ7392780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=L8R42_004791;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=HBQ7392780.1;transl_table=11 DAFVNP010000222.1 tpg gene 1075 1365 . - . ID=gene-L8R42_004792;Name=L8R42_004792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004792 DAFVNP010000222.1 Protein Homology CDS 1075 1365 . - 0 ID=cds-HBQ7392781.1;Parent=gene-L8R42_004792;Dbxref=NCBI_GP:HBQ7392781.1;Name=HBQ7392781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985910.1;locus_tag=L8R42_004792;product=hypothetical protein;protein_id=HBQ7392781.1;transl_table=11 ##sequence-region DAFVNP010000223.1 1 1532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000223.1 tpg region 1 1532 . + . ID=DAFVNP010000223.1:1..1532;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000223.1 tpg gene 1 313 . + . ID=gene-L8R42_004793;Name=L8R42_004793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004793;partial=true;start_range=.,1 DAFVNP010000223.1 Protein Homology CDS 1 313 . + 1 ID=cds-HBQ7392782.1;Parent=gene-L8R42_004793;Dbxref=NCBI_GP:HBQ7392782.1;Name=HBQ7392782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221001.1;locus_tag=L8R42_004793;partial=true;product=recombinase family protein;protein_id=HBQ7392782.1;start_range=.,1;transl_table=11 DAFVNP010000223.1 tpg gene 495 1355 . + . ID=gene-L8R42_004794;Name=L8R42_004794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004794 DAFVNP010000223.1 Protein Homology CDS 495 1355 . + 0 ID=cds-HBQ7392783.1;Parent=gene-L8R42_004794;Dbxref=NCBI_GP:HBQ7392783.1;Name=HBQ7392783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=L8R42_004794;product=class A broad-spectrum beta-lactamase TEM-1;protein_id=HBQ7392783.1;transl_table=11 ##sequence-region DAFVNP010000224.1 1 1367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000224.1 tpg region 1 1367 . + . ID=DAFVNP010000224.1:1..1367;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000224.1 tpg gene 1 201 . + . ID=gene-L8R42_004795;Name=L8R42_004795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004795;partial=true;start_range=.,1 DAFVNP010000224.1 Protein Homology CDS 1 201 . + 0 ID=cds-HBQ7392784.1;Parent=gene-L8R42_004795;Dbxref=NCBI_GP:HBQ7392784.1;Name=HBQ7392784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611355.1;locus_tag=L8R42_004795;partial=true;product=IS3 family transposase;protein_id=HBQ7392784.1;start_range=.,1;transl_table=11 DAFVNP010000224.1 tpg gene 308 1111 . + . ID=gene-L8R42_004796;Name=L8R42_004796;Note=aph(3'')-Ib;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004796 DAFVNP010000224.1 Protein Homology CDS 308 1111 . + 0 ID=cds-HBQ7392785.1;Parent=gene-L8R42_004796;Dbxref=NCBI_GP:HBQ7392785.1;Name=HBQ7392785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=L8R42_004796;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=HBQ7392785.1;transl_table=11 DAFVNP010000224.1 tpg gene 1111 1367 . + . ID=gene-L8R42_004797;Name=L8R42_004797;end_range=1367,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004797;partial=true DAFVNP010000224.1 Protein Homology CDS 1111 1367 . + 0 ID=cds-HBQ7392786.1;Parent=gene-L8R42_004797;Dbxref=NCBI_GP:HBQ7392786.1;Name=HBQ7392786.1;end_range=1367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=L8R42_004797;partial=true;product=3'-kinase;protein_id=HBQ7392786.1;transl_table=11 ##sequence-region DAFVNP010000225.1 1 1335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000225.1 tpg region 1 1335 . + . ID=DAFVNP010000225.1:1..1335;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000225.1 tpg gene 153 500 . + . ID=gene-L8R42_004798;Name=L8R42_004798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004798 DAFVNP010000225.1 Protein Homology CDS 153 500 . + 0 ID=cds-HBQ7392787.1;Parent=gene-L8R42_004798;Dbxref=NCBI_GP:HBQ7392787.1;Name=HBQ7392787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1;locus_tag=L8R42_004798;product=quaternary ammonium compound efflux SMR transporter QacE delta 1;protein_id=HBQ7392787.1;transl_table=11 DAFVNP010000225.1 tpg gene 494 1333 . + . ID=gene-L8R42_004799;Name=sul1;gbkey=Gene;gene=sul1;gene_biotype=protein_coding;locus_tag=L8R42_004799 DAFVNP010000225.1 Protein Homology CDS 494 1333 . + 0 ID=cds-HBQ7392788.1;Parent=gene-L8R42_004799;Dbxref=NCBI_GP:HBQ7392788.1;Name=HBQ7392788.1;gbkey=CDS;gene=sul1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1;locus_tag=L8R42_004799;product=sulfonamide-resistant dihydropteroate synthase Sul1;protein_id=HBQ7392788.1;transl_table=11 ##sequence-region DAFVNP010000226.1 1 1229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000226.1 tpg region 1 1229 . + . ID=DAFVNP010000226.1:1..1229;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000226.1 tpg gene 1 519 . - . ID=gene-L8R42_004800;Name=L8R42_004800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004800;partial=true;start_range=.,1 DAFVNP010000226.1 Protein Homology CDS 1 519 . - 0 ID=cds-HBQ7392789.1;Parent=gene-L8R42_004800;Dbxref=NCBI_GP:HBQ7392789.1;Name=HBQ7392789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=L8R42_004800;partial=true;product=M20/M25/M40 family metallo-hydrolase;protein_id=HBQ7392789.1;start_range=.,1;transl_table=11 DAFVNP010000226.1 tpg gene 768 1226 . + . ID=gene-L8R42_004801;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=L8R42_004801 DAFVNP010000226.1 Protein Homology CDS 768 1226 . + 0 ID=cds-HBQ7392790.1;Parent=gene-L8R42_004801;Dbxref=NCBI_GP:HBQ7392790.1;Name=HBQ7392790.1;gbkey=CDS;gene=gpt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=L8R42_004801;product=xanthine phosphoribosyltransferase;protein_id=HBQ7392790.1;transl_table=11 ##sequence-region DAFVNP010000227.1 1 1209 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000227.1 tpg region 1 1209 . + . ID=DAFVNP010000227.1:1..1209;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000227.1 tpg gene 289 1164 . + . ID=gene-L8R42_004802;Name=blaCTX-M;gbkey=Gene;gene=blaCTX-M;gene_biotype=protein_coding;locus_tag=L8R42_004802 DAFVNP010000227.1 Protein Homology CDS 289 1164 . + 0 ID=cds-HBQ7392791.1;Parent=gene-L8R42_004802;Dbxref=NCBI_GP:HBQ7392791.1;Name=HBQ7392791.1;gbkey=CDS;gene=blaCTX-M;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032492044.1;locus_tag=L8R42_004802;product=CTX-M family class A extended-spectrum beta-lactamase;protein_id=HBQ7392791.1;transl_table=11 ##sequence-region DAFVNP010000228.1 1 1166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000228.1 tpg region 1 1166 . + . ID=DAFVNP010000228.1:1..1166;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000228.1 tpg gene 192 983 . + . ID=gene-L8R42_004803;Name=L8R42_004803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004803 DAFVNP010000228.1 Protein Homology CDS 192 983 . + 0 ID=cds-HBQ7392792.1;Parent=gene-L8R42_004803;Dbxref=NCBI_GP:HBQ7392792.1;Name=HBQ7392792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014325834.1;locus_tag=L8R42_004803;product=ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2;protein_id=HBQ7392792.1;transl_table=11 ##sequence-region DAFVNP010000229.1 1 1055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000229.1 tpg region 1 1055 . + . ID=DAFVNP010000229.1:1..1055;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000229.1 tpg gene 1 132 . + . ID=gene-L8R42_004804;Name=L8R42_004804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004804;partial=true;start_range=.,1 DAFVNP010000229.1 Protein Homology CDS 1 132 . + 0 ID=cds-HBQ7392793.1;Parent=gene-L8R42_004804;Dbxref=NCBI_GP:HBQ7392793.1;Name=HBQ7392793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_038404949.1;locus_tag=L8R42_004804;partial=true;product=AAC(3)-I family aminoglycoside 3-N-acetyltransferase;protein_id=HBQ7392793.1;start_range=.,1;transl_table=11 DAFVNP010000229.1 tpg gene 208 1005 . + . ID=gene-L8R42_004805;Name=L8R42_004805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004805 DAFVNP010000229.1 Protein Homology CDS 208 1005 . + 0 ID=cds-HBQ7392794.1;Parent=gene-L8R42_004805;Dbxref=NCBI_GP:HBQ7392794.1;Name=HBQ7392794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001436322.1;locus_tag=L8R42_004805;product=ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA7;protein_id=HBQ7392794.1;transl_table=11 ##sequence-region DAFVNP010000230.1 1 1020 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000230.1 tpg region 1 1020 . + . ID=DAFVNP010000230.1:1..1020;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000230.1 tpg gene 1 754 . + . ID=gene-L8R42_004806;Name=L8R42_004806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004806;partial=true;start_range=.,1 DAFVNP010000230.1 Protein Homology CDS 1 754 . + 1 ID=cds-HBQ7392795.1;Parent=gene-L8R42_004806;Dbxref=NCBI_GP:HBQ7392795.1;Name=HBQ7392795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=L8R42_004806;partial=true;product=HARLDQ motif MBL-fold protein;protein_id=HBQ7392795.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000231.1 1 1020 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000231.1 tpg region 1 1020 . + . ID=DAFVNP010000231.1:1..1020;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000231.1 tpg gene 1 754 . + . ID=gene-L8R42_004807;Name=L8R42_004807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004807;partial=true;start_range=.,1 DAFVNP010000231.1 Protein Homology CDS 1 754 . + 1 ID=cds-HBQ7392796.1;Parent=gene-L8R42_004807;Dbxref=NCBI_GP:HBQ7392796.1;Name=HBQ7392796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=L8R42_004807;partial=true;product=HARLDQ motif MBL-fold protein;protein_id=HBQ7392796.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000232.1 1 921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000232.1 tpg region 1 921 . + . ID=DAFVNP010000232.1:1..921;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000232.1 tpg gene 17 808 . + . ID=gene-L8R42_004808;Name=sul3;gbkey=Gene;gene=sul3;gene_biotype=protein_coding;locus_tag=L8R42_004808 DAFVNP010000232.1 Protein Homology CDS 17 808 . + 0 ID=cds-HBQ7392797.1;Parent=gene-L8R42_004808;Dbxref=NCBI_GP:HBQ7392797.1;Name=HBQ7392797.1;gbkey=CDS;gene=sul3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034420.1;locus_tag=L8R42_004808;product=sulfonamide-resistant dihydropteroate synthase Sul3;protein_id=HBQ7392797.1;transl_table=11 ##sequence-region DAFVNP010000233.1 1 881 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000233.1 tpg region 1 881 . + . ID=DAFVNP010000233.1:1..881;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000233.1 tpg gene 60 536 . + . ID=gene-L8R42_004809;Name=aac(3)-Id;gbkey=Gene;gene=aac(3)-Id;gene_biotype=protein_coding;locus_tag=L8R42_004809 DAFVNP010000233.1 Protein Homology CDS 60 536 . + 0 ID=cds-HBQ7392798.1;Parent=gene-L8R42_004809;Dbxref=NCBI_GP:HBQ7392798.1;Name=HBQ7392798.1;gbkey=CDS;gene=aac(3)-Id;inference=COORDINATES: similar to AA sequence:RefSeq:WP_038404949.1;locus_tag=L8R42_004809;product=aminoglycoside N-acetyltransferase AAC(3)-Id;protein_id=HBQ7392798.1;transl_table=11 DAFVNP010000233.1 tpg gene 612 881 . + . ID=gene-L8R42_004810;Name=L8R42_004810;end_range=881,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004810;partial=true DAFVNP010000233.1 Protein Homology CDS 612 881 . + 0 ID=cds-HBQ7392799.1;Parent=gene-L8R42_004810;Dbxref=NCBI_GP:HBQ7392799.1;Name=HBQ7392799.1;end_range=881,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_048608579.1;locus_tag=L8R42_004810;partial=true;product=nucleotidyltransferase domain-containing protein;protein_id=HBQ7392799.1;transl_table=11 ##sequence-region DAFVNP010000234.1 1 454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000234.1 tpg region 1 454 . + . ID=DAFVNP010000234.1:1..454;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000234.1 tpg gene 1 329 . + . ID=gene-L8R42_004811;Name=L8R42_004811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L8R42_004811;partial=true;start_range=.,1 DAFVNP010000234.1 Protein Homology CDS 1 329 . + 2 ID=cds-HBQ7392800.1;Parent=gene-L8R42_004811;Dbxref=NCBI_GP:HBQ7392800.1;Name=HBQ7392800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=L8R42_004811;partial=true;product=GNAT family N-acetyltransferase;protein_id=HBQ7392800.1;start_range=.,1;transl_table=11 ##sequence-region DAFVNP010000235.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=192955 DAFVNP010000235.1 tpg region 1 399 . + . ID=DAFVNP010000235.1:1..399;Dbxref=taxon:192955;collected-by=NMRL (Harare Zimbabwe);collection-date=2019;country=Zimbabwe: Harare (Waterfalls);gbkey=Src;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Kentucky;strain=ZM-11;sub-species=enterica DAFVNP010000235.1 tpg gene 28 360 . + . ID=gene-L8R42_004812;Name=qac;gbkey=Gene;gene=qac;gene_biotype=protein_coding;locus_tag=L8R42_004812 DAFVNP010000235.1 Protein Homology CDS 28 360 . + 0 ID=cds-HBQ7392801.1;Parent=gene-L8R42_004812;Dbxref=NCBI_GP:HBQ7392801.1;Name=HBQ7392801.1;gbkey=CDS;gene=qac;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015059047.1;locus_tag=L8R42_004812;product=quaternary ammonium compound efflux SMR transporter QacL;protein_id=HBQ7392801.1;transl_table=11 ###