##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3031642v1 #!genome-build-accession NCBI_Assembly:GCA_030316425.1 #!annotation-date 02/14/2023 14:32:21 #!annotation-source NCBI ##sequence-region CP118116.1 1 4658163 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=594 CP118116.1 Genbank region 1 4658163 . + . ID=CP118116.1:1..4658163;Dbxref=taxon:594;Is_circular=true;Name=ANONYMOUS;collection-date=2017-07-27;country=Eswatini;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Gallus gallus domesticus;serovar=Gallinarum;strain=Es_440297;sub-species=enterica CP118116.1 Genbank gene 80 145 . + . ID=gene-PUW38_00005;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=PUW38_00005 CP118116.1 Protein Homology CDS 80 145 . + 0 ID=cds-WJG83320.1;Parent=gene-PUW38_00005;Dbxref=NCBI_GP:WJG83320.1;Name=WJG83320.1;Ontology_term=GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=PUW38_00005;product=thr operon leader peptide;protein_id=WJG83320.1;transl_table=11 CP118116.1 cmsearch sequence_feature 81 201 . + . ID=id-CP118116.1:81..201;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118116.1 Genbank gene 227 2689 . + . ID=gene-PUW38_00010;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=PUW38_00010 CP118116.1 Protein Homology CDS 227 2689 . + 0 ID=cds-WJG81288.1;Parent=gene-PUW38_00010;Dbxref=NCBI_GP:WJG81288.1;Name=WJG81288.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=PUW38_00010;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WJG81288.1;transl_table=11 CP118116.1 Genbank gene 2691 3620 . + . ID=gene-PUW38_00015;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=PUW38_00015 CP118116.1 Protein Homology CDS 2691 3620 . + 0 ID=cds-WJG81289.1;Parent=gene-PUW38_00015;Dbxref=NCBI_GP:WJG81289.1;Name=WJG81289.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=PUW38_00015;product=homoserine kinase;protein_id=WJG81289.1;transl_table=11 CP118116.1 Genbank gene 3624 4910 . + . ID=gene-PUW38_00020;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=PUW38_00020 CP118116.1 Protein Homology CDS 3624 4910 . + 0 ID=cds-WJG81290.1;Parent=gene-PUW38_00020;Dbxref=NCBI_GP:WJG81290.1;Name=WJG81290.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=PUW38_00020;product=threonine synthase;protein_id=WJG81290.1;transl_table=11 CP118116.1 Genbank gene 5004 5777 . - . ID=gene-PUW38_00025;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=PUW38_00025 CP118116.1 Protein Homology CDS 5004 5777 . - 0 ID=cds-WJG81291.1;Parent=gene-PUW38_00025;Dbxref=NCBI_GP:WJG81291.1;Name=WJG81291.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=PUW38_00025;product=peroxide stress protein YaaA;protein_id=WJG81291.1;transl_table=11 CP118116.1 Genbank gene 5856 7286 . - . ID=gene-PUW38_00030;Name=PUW38_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00030 CP118116.1 Protein Homology CDS 5856 7286 . - 0 ID=cds-WJG81292.1;Parent=gene-PUW38_00030;Dbxref=NCBI_GP:WJG81292.1;Name=WJG81292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=PUW38_00030;product=sodium:alanine symporter family protein;protein_id=WJG81292.1;transl_table=11 CP118116.1 Genbank gene 7555 8508 . + . ID=gene-PUW38_00035;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PUW38_00035 CP118116.1 Protein Homology CDS 7555 8508 . + 0 ID=cds-WJG81293.1;Parent=gene-PUW38_00035;Dbxref=NCBI_GP:WJG81293.1;Name=WJG81293.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=PUW38_00035;product=transaldolase;protein_id=WJG81293.1;transl_table=11 CP118116.1 Genbank gene 8619 9209 . + . ID=gene-PUW38_00040;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=PUW38_00040 CP118116.1 Protein Homology CDS 8619 9209 . + 0 ID=cds-WJG81294.1;Parent=gene-PUW38_00040;Dbxref=NCBI_GP:WJG81294.1;Name=WJG81294.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=PUW38_00040;product=molybdopterin adenylyltransferase;protein_id=WJG81294.1;transl_table=11 CP118116.1 Genbank gene 9266 9832 . - . ID=gene-PUW38_00045;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=PUW38_00045 CP118116.1 Protein Homology CDS 9266 9832 . - 0 ID=cds-WJG81295.1;Parent=gene-PUW38_00045;Dbxref=NCBI_GP:WJG81295.1;Name=WJG81295.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=PUW38_00045;product=acetate uptake transporter;protein_id=WJG81295.1;transl_table=11 CP118116.1 Genbank pseudogene 9982 10695 . - . ID=gene-PUW38_00050;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=pseudogene;locus_tag=PUW38_00050;pseudo=true CP118116.1 Protein Homology CDS 9982 10695 . - 0 ID=cds-PUW38_00050;Parent=gene-PUW38_00050;Note=internal stop;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=PUW38_00050;product=acidic protein MsyB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 10731 11135 . - . ID=gene-PUW38_00055;Name=PUW38_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00055 CP118116.1 Protein Homology CDS 10731 11135 . - 0 ID=cds-WJG81296.1;Parent=gene-PUW38_00055;Dbxref=NCBI_GP:WJG81296.1;Name=WJG81296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=PUW38_00055;product=DUF2541 family protein;protein_id=WJG81296.1;transl_table=11 CP118116.1 Genbank gene 11484 13400 . + . ID=gene-PUW38_00060;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=PUW38_00060 CP118116.1 Protein Homology CDS 11484 13400 . + 0 ID=cds-WJG81297.1;Parent=gene-PUW38_00060;Dbxref=NCBI_GP:WJG81297.1;Name=WJG81297.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=PUW38_00060;product=molecular chaperone DnaK;protein_id=WJG81297.1;transl_table=11 CP118116.1 Genbank gene 13486 14625 . + . ID=gene-PUW38_00065;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=PUW38_00065 CP118116.1 Protein Homology CDS 13486 14625 . + 0 ID=cds-WJG81298.1;Parent=gene-PUW38_00065;Dbxref=NCBI_GP:WJG81298.1;Name=WJG81298.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=PUW38_00065;product=molecular chaperone DnaJ;protein_id=WJG81298.1;transl_table=11 CP118116.1 Genbank pseudogene 14906 15852 . + . ID=gene-PUW38_00070;Name=PUW38_00070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00070;pseudo=true CP118116.1 Protein Homology CDS 14906 15852 . + 0 ID=cds-PUW38_00070;Parent=gene-PUW38_00070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=PUW38_00070;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 15979 16323 . + . ID=gene-PUW38_00075;Name=PUW38_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00075 CP118116.1 Protein Homology CDS 15979 16323 . + 0 ID=cds-WJG81299.1;Parent=gene-PUW38_00075;Dbxref=NCBI_GP:WJG81299.1;Name=WJG81299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=PUW38_00075;product=phage holin family protein;protein_id=WJG81299.1;transl_table=11 CP118116.1 Genbank gene 16384 16917 . - . ID=gene-PUW38_00080;Name=PUW38_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00080 CP118116.1 Protein Homology CDS 16384 16917 . - 0 ID=cds-WJG81300.1;Parent=gene-PUW38_00080;Dbxref=NCBI_GP:WJG81300.1;Name=WJG81300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=PUW38_00080;product=glycoside hydrolase family 108 protein;protein_id=WJG81300.1;transl_table=11 CP118116.1 Genbank gene 16934 17377 . - . ID=gene-PUW38_00085;Name=PUW38_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00085 CP118116.1 Protein Homology CDS 16934 17377 . - 0 ID=cds-WJG81301.1;Parent=gene-PUW38_00085;Dbxref=NCBI_GP:WJG81301.1;Name=WJG81301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=PUW38_00085;product=transcriptional regulator;protein_id=WJG81301.1;transl_table=11 CP118116.1 Genbank pseudogene 17758 19854 . + . ID=gene-PUW38_00090;Name=PUW38_00090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00090;pseudo=true CP118116.1 Protein Homology CDS 17758 19854 . + 0 ID=cds-PUW38_00090;Parent=gene-PUW38_00090;Note=frameshifted;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=PUW38_00090;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 19946 22942 . + . ID=gene-PUW38_00095;Name=PUW38_00095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00095;pseudo=true CP118116.1 Protein Homology CDS 19946 22942 . + 0 ID=cds-PUW38_00095;Parent=gene-PUW38_00095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=PUW38_00095;product=chitinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 23222 23926 . + . ID=gene-PUW38_00100;Name=PUW38_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00100 CP118116.1 Protein Homology CDS 23222 23926 . + 0 ID=cds-WJG81302.1;Parent=gene-PUW38_00100;Dbxref=NCBI_GP:WJG81302.1;Name=WJG81302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=PUW38_00100;product=helix-turn-helix domain-containing protein;protein_id=WJG81302.1;transl_table=11 CP118116.1 Genbank gene 24356 24898 . + . ID=gene-PUW38_00105;Name=PUW38_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00105 CP118116.1 Protein Homology CDS 24356 24898 . + 0 ID=cds-WJG81303.1;Parent=gene-PUW38_00105;Dbxref=NCBI_GP:WJG81303.1;Name=WJG81303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=PUW38_00105;product=fimbrial protein BcfA;protein_id=WJG81303.1;transl_table=11 CP118116.1 Genbank gene 24999 25685 . + . ID=gene-PUW38_00110;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=PUW38_00110 CP118116.1 Protein Homology CDS 24999 25685 . + 0 ID=cds-WJG81304.1;Parent=gene-PUW38_00110;Dbxref=NCBI_GP:WJG81304.1;Name=WJG81304.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=PUW38_00110;product=fimbrial biogenesis chaperone BcfB;protein_id=WJG81304.1;transl_table=11 CP118116.1 Genbank gene 25690 28311 . + . ID=gene-PUW38_00115;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=PUW38_00115 CP118116.1 Protein Homology CDS 25690 28311 . + 0 ID=cds-WJG83321.1;Parent=gene-PUW38_00115;Dbxref=NCBI_GP:WJG83321.1;Name=WJG83321.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=PUW38_00115;product=fimbrial usher BcfC;protein_id=WJG83321.1;transl_table=11 CP118116.1 Genbank gene 28312 29319 . + . ID=gene-PUW38_00120;Name=PUW38_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00120 CP118116.1 Protein Homology CDS 28312 29319 . + 0 ID=cds-WJG81305.1;Parent=gene-PUW38_00120;Dbxref=NCBI_GP:WJG81305.1;Name=WJG81305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=PUW38_00120;product=fimbrial protein BcfD;protein_id=WJG81305.1;transl_table=11 CP118116.1 Genbank gene 29320 29865 . + . ID=gene-PUW38_00125;Name=PUW38_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00125 CP118116.1 Protein Homology CDS 29320 29865 . + 0 ID=cds-WJG81306.1;Parent=gene-PUW38_00125;Dbxref=NCBI_GP:WJG81306.1;Name=WJG81306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=PUW38_00125;product=fimbrial protein BcfE;protein_id=WJG81306.1;transl_table=11 CP118116.1 Genbank gene 29881 30399 . + . ID=gene-PUW38_00130;Name=PUW38_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00130 CP118116.1 Protein Homology CDS 29881 30399 . + 0 ID=cds-WJG81307.1;Parent=gene-PUW38_00130;Dbxref=NCBI_GP:WJG81307.1;Name=WJG81307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=PUW38_00130;product=fimbrial protein BcfF;protein_id=WJG81307.1;transl_table=11 CP118116.1 Genbank gene 30365 31096 . + . ID=gene-PUW38_00135;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=PUW38_00135 CP118116.1 Protein Homology CDS 30365 31096 . + 0 ID=cds-WJG81308.1;Parent=gene-PUW38_00135;Dbxref=NCBI_GP:WJG81308.1;Name=WJG81308.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=PUW38_00135;product=fimbrial chaperone BcfG;protein_id=WJG81308.1;transl_table=11 CP118116.1 Genbank pseudogene 31160 32003 . + . ID=gene-PUW38_00140;Name=PUW38_00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00140;pseudo=true CP118116.1 Protein Homology CDS 31160 32003 . + 0 ID=cds-PUW38_00140;Parent=gene-PUW38_00140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=PUW38_00140;product=DsbA family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 32042 32329 . + . ID=gene-PUW38_00145;Name=PUW38_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00145 CP118116.1 Protein Homology CDS 32042 32329 . + 0 ID=cds-WJG81309.1;Parent=gene-PUW38_00145;Dbxref=NCBI_GP:WJG81309.1;Name=WJG81309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=PUW38_00145;product=hypothetical protein;protein_id=WJG81309.1;transl_table=11 CP118116.1 Genbank gene 32429 32878 . - . ID=gene-PUW38_00150;Name=PUW38_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00150 CP118116.1 Protein Homology CDS 32429 32878 . - 0 ID=cds-WJG81310.1;Parent=gene-PUW38_00150;Dbxref=NCBI_GP:WJG81310.1;Name=WJG81310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=PUW38_00150;product=transcriptional regulator;protein_id=WJG81310.1;transl_table=11 CP118116.1 Genbank gene 33248 34252 . + . ID=gene-PUW38_00155;Name=PUW38_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00155 CP118116.1 Protein Homology CDS 33248 34252 . + 0 ID=cds-WJG81311.1;Parent=gene-PUW38_00155;Dbxref=NCBI_GP:WJG81311.1;Name=WJG81311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=PUW38_00155;product=LysR family transcriptional regulator;protein_id=WJG81311.1;transl_table=11 CP118116.1 Genbank pseudogene 34260 34699 . - . ID=gene-PUW38_00160;Name=PUW38_00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00160;pseudo=true CP118116.1 Protein Homology CDS 34260 34699 . - 0 ID=cds-PUW38_00160;Parent=gene-PUW38_00160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=PUW38_00160;product=transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 35222 36940 . + . ID=gene-PUW38_00165;Name=PUW38_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00165 CP118116.1 Protein Homology CDS 35222 36940 . + 0 ID=cds-WJG81312.1;Parent=gene-PUW38_00165;Dbxref=NCBI_GP:WJG81312.1;Name=WJG81312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=PUW38_00165;product=aryl-sulfate sulfotransferase;protein_id=WJG81312.1;transl_table=11 CP118116.1 Genbank pseudogene 36986 38556 . - . ID=gene-PUW38_00170;Name=PUW38_00170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00170;pseudo=true CP118116.1 Protein Homology CDS 36986 38556 . - 0 ID=cds-PUW38_00170;Parent=gene-PUW38_00170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=PUW38_00170;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 38655 39416 . - . ID=gene-PUW38_00175;Name=PUW38_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00175 CP118116.1 Protein Homology CDS 38655 39416 . - 0 ID=cds-WJG81313.1;Parent=gene-PUW38_00175;Dbxref=NCBI_GP:WJG81313.1;Name=WJG81313.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=PUW38_00175;product=outer membrane protein OmpK;protein_id=WJG81313.1;transl_table=11 CP118116.1 Genbank pseudogene 40010 41502 . + . ID=gene-PUW38_00180;Name=PUW38_00180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00180;pseudo=true CP118116.1 Protein Homology CDS 40010 41502 . + 0 ID=cds-PUW38_00180;Parent=gene-PUW38_00180;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=PUW38_00180;product=sulfatase-like hydrolase/transferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 41601 42791 . + . ID=gene-PUW38_00185;Name=PUW38_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00185 CP118116.1 Protein Homology CDS 41601 42791 . + 0 ID=cds-WJG81314.1;Parent=gene-PUW38_00185;Dbxref=NCBI_GP:WJG81314.1;Name=WJG81314.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=PUW38_00185;product=anaerobic sulfatase maturase;protein_id=WJG81314.1;transl_table=11 CP118116.1 Genbank gene 42810 44063 . + . ID=gene-PUW38_00190;Name=PUW38_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00190 CP118116.1 Protein Homology CDS 42810 44063 . + 0 ID=cds-WJG81315.1;Parent=gene-PUW38_00190;Dbxref=NCBI_GP:WJG81315.1;Name=WJG81315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=PUW38_00190;product=cytoplasmic protein;protein_id=WJG81315.1;transl_table=11 CP118116.1 Genbank pseudogene 44190 45904 . + . ID=gene-PUW38_00195;Name=PUW38_00195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00195;pseudo=true CP118116.1 Protein Homology CDS 44190 45904 . + 0 ID=cds-PUW38_00195;Parent=gene-PUW38_00195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=PUW38_00195;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 46067 47233 . + . ID=gene-PUW38_00200;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=PUW38_00200 CP118116.1 Protein Homology CDS 46067 47233 . + 0 ID=cds-WJG81316.1;Parent=gene-PUW38_00200;Dbxref=NCBI_GP:WJG81316.1;Name=WJG81316.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=PUW38_00200;product=Na+/H+ antiporter NhaA;protein_id=WJG81316.1;transl_table=11 CP118116.1 Genbank gene 47295 48194 . + . ID=gene-PUW38_00205;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=PUW38_00205 CP118116.1 Protein Homology CDS 47295 48194 . + 0 ID=cds-WJG81317.1;Parent=gene-PUW38_00205;Dbxref=NCBI_GP:WJG81317.1;Name=WJG81317.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=PUW38_00205;product=transcriptional activator NhaR;protein_id=WJG81317.1;transl_table=11 CP118116.1 Genbank gene 48249 50288 . - . ID=gene-PUW38_00210;Name=PUW38_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00210 CP118116.1 Protein Homology CDS 48249 50288 . - 0 ID=cds-WJG81318.1;Parent=gene-PUW38_00210;Dbxref=NCBI_GP:WJG81318.1;Name=WJG81318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=PUW38_00210;product=glycoside hydrolase family 31 protein;protein_id=WJG81318.1;transl_table=11 CP118116.1 Genbank pseudogene 50328 51700 . - . ID=gene-PUW38_00215;Name=PUW38_00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00215;pseudo=true CP118116.1 Protein Homology CDS 50328 51700 . - 0 ID=cds-PUW38_00215;Parent=gene-PUW38_00215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=PUW38_00215;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 52156 52419 . - . ID=gene-PUW38_00220;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=PUW38_00220 CP118116.1 Protein Homology CDS 52156 52419 . - 0 ID=cds-WJG81319.1;Parent=gene-PUW38_00220;Dbxref=NCBI_GP:WJG81319.1;Name=WJG81319.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=PUW38_00220;product=30S ribosomal protein S20;protein_id=WJG81319.1;transl_table=11 CP118116.1 Genbank gene 52525 52740 . + . ID=gene-PUW38_00225;Name=PUW38_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00225 CP118116.1 Protein Homology CDS 52525 52740 . + 0 ID=cds-WJG81320.1;Parent=gene-PUW38_00225;Dbxref=NCBI_GP:WJG81320.1;Name=WJG81320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=PUW38_00225;product=YaaY family protein;protein_id=WJG81320.1;transl_table=11 CP118116.1 Genbank gene 52748 53686 . + . ID=gene-PUW38_00230;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=PUW38_00230 CP118116.1 Protein Homology CDS 52748 53686 . + 0 ID=cds-WJG81321.1;Parent=gene-PUW38_00230;Dbxref=NCBI_GP:WJG81321.1;Name=WJG81321.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=PUW38_00230;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WJG81321.1;transl_table=11 CP118116.1 Genbank gene 53731 56565 . + . ID=gene-PUW38_00235;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=PUW38_00235 CP118116.1 Protein Homology CDS 53731 56565 . + 0 ID=cds-WJG81322.1;Parent=gene-PUW38_00235;Dbxref=NCBI_GP:WJG81322.1;Name=WJG81322.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=PUW38_00235;product=isoleucine--tRNA ligase;protein_id=WJG81322.1;transl_table=11 CP118116.1 Genbank gene 56565 57065 . + . ID=gene-PUW38_00240;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=PUW38_00240 CP118116.1 Protein Homology CDS 56565 57065 . + 0 ID=cds-WJG81323.1;Parent=gene-PUW38_00240;Dbxref=NCBI_GP:WJG81323.1;Name=WJG81323.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=PUW38_00240;product=signal peptidase II;protein_id=WJG81323.1;transl_table=11 CP118116.1 Genbank gene 57220 57669 . + . ID=gene-PUW38_00245;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=PUW38_00245 CP118116.1 Protein Homology CDS 57220 57669 . + 0 ID=cds-WJG81324.1;Parent=gene-PUW38_00245;Dbxref=NCBI_GP:WJG81324.1;Name=WJG81324.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=PUW38_00245;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJG81324.1;transl_table=11 CP118116.1 Genbank gene 57672 58622 . + . ID=gene-PUW38_00250;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=PUW38_00250 CP118116.1 Protein Homology CDS 57672 58622 . + 0 ID=cds-WJG81325.1;Parent=gene-PUW38_00250;Dbxref=NCBI_GP:WJG81325.1;Name=WJG81325.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=PUW38_00250;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WJG81325.1;transl_table=11 CP118116.1 Genbank gene 58822 60024 . + . ID=gene-PUW38_00255;Name=PUW38_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00255 CP118116.1 Protein Homology CDS 58822 60024 . + 0 ID=cds-WJG81326.1;Parent=gene-PUW38_00255;Dbxref=NCBI_GP:WJG81326.1;Name=WJG81326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=PUW38_00255;product=nitrite reductase;protein_id=WJG81326.1;transl_table=11 CP118116.1 Genbank gene 60040 60960 . + . ID=gene-PUW38_00260;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=PUW38_00260 CP118116.1 Protein Homology CDS 60040 60960 . + 0 ID=cds-WJG81327.1;Parent=gene-PUW38_00260;Dbxref=NCBI_GP:WJG81327.1;Name=WJG81327.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=PUW38_00260;product=ribonucleoside hydrolase RihC;protein_id=WJG81327.1;transl_table=11 CP118116.1 Genbank gene 60982 61665 . - . ID=gene-PUW38_00265;Name=PUW38_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00265 CP118116.1 Protein Homology CDS 60982 61665 . - 0 ID=cds-WJG81328.1;Parent=gene-PUW38_00265;Dbxref=NCBI_GP:WJG81328.1;Name=WJG81328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=PUW38_00265;product=response regulator;protein_id=WJG81328.1;transl_table=11 CP118116.1 Genbank gene 61667 63286 . - . ID=gene-PUW38_00270;Name=PUW38_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00270 CP118116.1 Protein Homology CDS 61667 63286 . - 0 ID=cds-WJG83322.1;Parent=gene-PUW38_00270;Dbxref=NCBI_GP:WJG83322.1;Name=WJG83322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=PUW38_00270;product=sensor histidine kinase;protein_id=WJG83322.1;transl_table=11 CP118116.1 Genbank gene 63421 64722 . - . ID=gene-PUW38_00275;Name=PUW38_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00275 CP118116.1 Protein Homology CDS 63421 64722 . - 0 ID=cds-WJG81329.1;Parent=gene-PUW38_00275;Dbxref=NCBI_GP:WJG81329.1;Name=WJG81329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW38_00275;product=oxalacetate decarboxylase subunit beta;protein_id=WJG81329.1;transl_table=11 CP118116.1 Genbank gene 64735 66507 . - . ID=gene-PUW38_00280;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW38_00280 CP118116.1 Protein Homology CDS 64735 66507 . - 0 ID=cds-WJG81330.1;Parent=gene-PUW38_00280;Dbxref=NCBI_GP:WJG81330.1;Name=WJG81330.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW38_00280;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJG81330.1;transl_table=11 CP118116.1 Genbank gene 66524 66763 . - . ID=gene-PUW38_00285;Name=PUW38_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00285 CP118116.1 Protein Homology CDS 66524 66763 . - 0 ID=cds-WJG81331.1;Parent=gene-PUW38_00285;Dbxref=NCBI_GP:WJG81331.1;Name=WJG81331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=PUW38_00285;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJG81331.1;transl_table=11 CP118116.1 Genbank pseudogene 66922 68260 . - . ID=gene-PUW38_00290;Name=citS;gbkey=Gene;gene=citS;gene_biotype=pseudogene;locus_tag=PUW38_00290;pseudo=true CP118116.1 Protein Homology CDS 66922 68260 . - 0 ID=cds-PUW38_00290;Parent=gene-PUW38_00290;Note=frameshifted;gbkey=CDS;gene=citS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=PUW38_00290;product=citrate/sodium symporter CitS;pseudo=true;transl_table=11 CP118116.1 Genbank gene 68505 69548 . + . ID=gene-PUW38_00295;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PUW38_00295 CP118116.1 Protein Homology CDS 68505 69548 . + 0 ID=cds-WJG81332.1;Parent=gene-PUW38_00295;Dbxref=NCBI_GP:WJG81332.1;Name=WJG81332.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=PUW38_00295;product=[citrate (pro-3S)-lyase] ligase;protein_id=WJG81332.1;transl_table=11 CP118116.1 Genbank gene 69578 69871 . + . ID=gene-PUW38_00300;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PUW38_00300 CP118116.1 Protein Homology CDS 69578 69871 . + 0 ID=cds-WJG81333.1;Parent=gene-PUW38_00300;Dbxref=NCBI_GP:WJG81333.1;Name=WJG81333.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=PUW38_00300;product=citrate lyase acyl carrier protein;protein_id=WJG81333.1;transl_table=11 CP118116.1 Genbank gene 69868 70737 . + . ID=gene-PUW38_00305;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PUW38_00305 CP118116.1 Protein Homology CDS 69868 70737 . + 0 ID=cds-WJG81334.1;Parent=gene-PUW38_00305;Dbxref=NCBI_GP:WJG81334.1;Name=WJG81334.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=PUW38_00305;product=citrate (pro-3S)-lyase subunit beta;protein_id=WJG81334.1;transl_table=11 CP118116.1 Genbank gene 70748 72268 . + . ID=gene-PUW38_00310;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PUW38_00310 CP118116.1 Protein Homology CDS 70748 72268 . + 0 ID=cds-WJG81335.1;Parent=gene-PUW38_00310;Dbxref=NCBI_GP:WJG81335.1;Name=WJG81335.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=PUW38_00310;product=citrate lyase subunit alpha;protein_id=WJG81335.1;transl_table=11 CP118116.1 Genbank gene 72268 72819 . + . ID=gene-PUW38_00315;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PUW38_00315 CP118116.1 Protein Homology CDS 72268 72819 . + 0 ID=cds-WJG81336.1;Parent=gene-PUW38_00315;Dbxref=NCBI_GP:WJG81336.1;Name=WJG81336.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=PUW38_00315;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WJG81336.1;transl_table=11 CP118116.1 Genbank gene 72797 73705 . + . ID=gene-PUW38_00320;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PUW38_00320 CP118116.1 Protein Homology CDS 72797 73705 . + 0 ID=cds-WJG81337.1;Parent=gene-PUW38_00320;Dbxref=NCBI_GP:WJG81337.1;Name=WJG81337.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=citG;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=PUW38_00320;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WJG81337.1;transl_table=11 CP118116.1 Genbank gene 73885 74706 . + . ID=gene-PUW38_00325;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=PUW38_00325 CP118116.1 Protein Homology CDS 73885 74706 . + 0 ID=cds-WJG81338.1;Parent=gene-PUW38_00325;Dbxref=NCBI_GP:WJG81338.1;Name=WJG81338.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=PUW38_00325;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WJG81338.1;transl_table=11 CP118116.1 Genbank pseudogene 75569 76716 . + . ID=gene-PUW38_00330;Name=carA;gbkey=Gene;gene=carA;gene_biotype=pseudogene;locus_tag=PUW38_00330;pseudo=true CP118116.1 Protein Homology CDS 75569 76716 . + 0 ID=cds-PUW38_00330;Parent=gene-PUW38_00330;Note=frameshifted;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=PUW38_00330;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;pseudo=true;transl_table=11 CP118116.1 Genbank gene 76735 79962 . + . ID=gene-PUW38_00335;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=PUW38_00335 CP118116.1 Protein Homology CDS 76735 79962 . + 0 ID=cds-WJG81339.1;Parent=gene-PUW38_00335;Dbxref=NCBI_GP:WJG81339.1;Name=WJG81339.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=PUW38_00335;product=carbamoyl-phosphate synthase large subunit;protein_id=WJG81339.1;transl_table=11 CP118116.1 Genbank gene 80236 80631 . + . ID=gene-PUW38_00340;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=PUW38_00340 CP118116.1 Protein Homology CDS 80236 80631 . + 0 ID=cds-WJG81340.1;Parent=gene-PUW38_00340;Dbxref=NCBI_GP:WJG81340.1;Name=WJG81340.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=PUW38_00340;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WJG81340.1;transl_table=11 CP118116.1 Genbank gene 80709 81305 . - . ID=gene-PUW38_00345;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=PUW38_00345 CP118116.1 Protein Homology CDS 80709 81305 . - 0 ID=cds-WJG81341.1;Parent=gene-PUW38_00345;Dbxref=NCBI_GP:WJG81341.1;Name=WJG81341.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=PUW38_00345;product=carnitine operon protein CaiE;protein_id=WJG81341.1;transl_table=11 CP118116.1 Genbank gene 81415 82200 . - . ID=gene-PUW38_00350;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=PUW38_00350 CP118116.1 Protein Homology CDS 81415 82200 . - 0 ID=cds-WJG81342.1;Parent=gene-PUW38_00350;Dbxref=NCBI_GP:WJG81342.1;Name=WJG81342.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=PUW38_00350;product=crotonobetainyl-CoA hydratase;protein_id=WJG81342.1;transl_table=11 CP118116.1 Genbank pseudogene 82254 83807 . - . ID=gene-PUW38_00355;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=pseudogene;locus_tag=PUW38_00355;pseudo=true CP118116.1 Protein Homology CDS 82254 83807 . - 0 ID=cds-PUW38_00355;Parent=gene-PUW38_00355;Note=internal stop;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=PUW38_00355;product=crotonobetaine/carnitine-CoA ligase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 83870 85086 . - . ID=gene-PUW38_00360;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=pseudogene;locus_tag=PUW38_00360;pseudo=true CP118116.1 Protein Homology CDS 83870 85086 . - 0 ID=cds-PUW38_00360;Parent=gene-PUW38_00360;Note=frameshifted;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=PUW38_00360;product=L-carnitine CoA-transferase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 85198 86339 . - . ID=gene-PUW38_00365;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=pseudogene;locus_tag=PUW38_00365;pseudo=true CP118116.1 Protein Homology CDS 85198 86339 . - 0 ID=cds-PUW38_00365;Parent=gene-PUW38_00365;Note=frameshifted;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=PUW38_00365;product=crotonobetainyl-CoA dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 86374 87891 . - . ID=gene-PUW38_00370;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=PUW38_00370 CP118116.1 Protein Homology CDS 86374 87891 . - 0 ID=cds-WJG81343.1;Parent=gene-PUW38_00370;Dbxref=NCBI_GP:WJG81343.1;Name=WJG81343.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=PUW38_00370;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WJG81343.1;transl_table=11 CP118116.1 Genbank gene 88372 89142 . + . ID=gene-PUW38_00375;Name=PUW38_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00375 CP118116.1 Protein Homology CDS 88372 89142 . + 0 ID=cds-WJG81344.1;Parent=gene-PUW38_00375;Dbxref=NCBI_GP:WJG81344.1;Name=WJG81344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=PUW38_00375;product=electron transfer flavoprotein FixA;protein_id=WJG81344.1;transl_table=11 CP118116.1 Genbank gene 89158 90099 . + . ID=gene-PUW38_00380;Name=PUW38_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00380 CP118116.1 Protein Homology CDS 89158 90099 . + 0 ID=cds-WJG81345.1;Parent=gene-PUW38_00380;Dbxref=NCBI_GP:WJG81345.1;Name=WJG81345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=PUW38_00380;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WJG81345.1;transl_table=11 CP118116.1 Genbank gene 90149 91435 . + . ID=gene-PUW38_00385;Name=PUW38_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00385 CP118116.1 Protein Homology CDS 90149 91435 . + 0 ID=cds-WJG81346.1;Parent=gene-PUW38_00385;Dbxref=NCBI_GP:WJG81346.1;Name=WJG81346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=PUW38_00385;product=FAD-dependent oxidoreductase;protein_id=WJG81346.1;transl_table=11 CP118116.1 Genbank gene 91432 91719 . + . ID=gene-PUW38_00390;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=PUW38_00390 CP118116.1 Protein Homology CDS 91432 91719 . + 0 ID=cds-WJG81347.1;Parent=gene-PUW38_00390;Dbxref=NCBI_GP:WJG81347.1;Name=WJG81347.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=PUW38_00390;product=ferredoxin-like protein FixX;protein_id=WJG81347.1;transl_table=11 CP118116.1 Genbank gene 91866 93206 . + . ID=gene-PUW38_00395;Name=PUW38_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00395 CP118116.1 Protein Homology CDS 91866 93206 . + 0 ID=cds-WJG81348.1;Parent=gene-PUW38_00395;Dbxref=NCBI_GP:WJG81348.1;Name=WJG81348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746786.1;locus_tag=PUW38_00395;product=MFS transporter;protein_id=WJG81348.1;transl_table=11 CP118116.1 Genbank gene 93295 93525 . + . ID=gene-PUW38_00400;Name=PUW38_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00400 CP118116.1 Protein Homology CDS 93295 93525 . + 0 ID=cds-WJG81349.1;Parent=gene-PUW38_00400;Dbxref=NCBI_GP:WJG81349.1;Name=WJG81349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=PUW38_00400;product=YgdI/YgdR family lipoprotein;protein_id=WJG81349.1;transl_table=11 CP118116.1 Genbank gene 93817 94233 . + . ID=gene-PUW38_00405;Name=PUW38_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00405 CP118116.1 Protein Homology CDS 93817 94233 . + 0 ID=cds-WJG83323.1;Parent=gene-PUW38_00405;Dbxref=NCBI_GP:WJG83323.1;Name=WJG83323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=PUW38_00405;product=hypothetical protein;protein_id=WJG83323.1;transl_table=11 CP118116.1 Genbank gene 94457 94747 . - . ID=gene-PUW38_00410;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=PUW38_00410 CP118116.1 Protein Homology CDS 94457 94747 . - 0 ID=cds-WJG81350.1;Parent=gene-PUW38_00410;Dbxref=NCBI_GP:WJG81350.1;Name=WJG81350.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=PUW38_00410;product=DUF1471 family virulence protein SrfN;protein_id=WJG81350.1;transl_table=11 CP118116.1 Genbank gene 95645 97534 . + . ID=gene-PUW38_00415;Name=PUW38_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00415 CP118116.1 Protein Homology CDS 95645 97534 . + 0 ID=cds-WJG81351.1;Parent=gene-PUW38_00415;Dbxref=NCBI_GP:WJG81351.1;Name=WJG81351.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=PUW38_00415;product=sulfatase-like hydrolase/transferase;protein_id=WJG81351.1;transl_table=11 CP118116.1 Genbank gene 97941 98471 . + . ID=gene-PUW38_00420;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=PUW38_00420 CP118116.1 Protein Homology CDS 97941 98471 . + 0 ID=cds-WJG81352.1;Parent=gene-PUW38_00420;Dbxref=NCBI_GP:WJG81352.1;Name=WJG81352.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=PUW38_00420;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WJG81352.1;transl_table=11 CP118116.1 Genbank gene 98464 100332 . + . ID=gene-PUW38_00425;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=PUW38_00425 CP118116.1 Protein Homology CDS 98464 100332 . + 0 ID=cds-WJG81353.1;Parent=gene-PUW38_00425;Dbxref=NCBI_GP:WJG81353.1;Name=WJG81353.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=PUW38_00425;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WJG81353.1;transl_table=11 CP118116.1 Genbank gene 100531 101010 . + . ID=gene-PUW38_00430;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=PUW38_00430 CP118116.1 Protein Homology CDS 100531 101010 . + 0 ID=cds-WJG81354.1;Parent=gene-PUW38_00430;Dbxref=NCBI_GP:WJG81354.1;Name=WJG81354.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=PUW38_00430;product=type 3 dihydrofolate reductase;protein_id=WJG81354.1;transl_table=11 CP118116.1 Genbank gene 101116 101964 . - . ID=gene-PUW38_00435;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=PUW38_00435 CP118116.1 Protein Homology CDS 101116 101964 . - 0 ID=cds-WJG81355.1;Parent=gene-PUW38_00435;Dbxref=NCBI_GP:WJG81355.1;Name=WJG81355.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=PUW38_00435;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WJG81355.1;transl_table=11 CP118116.1 Genbank gene 101975 102352 . - . ID=gene-PUW38_00440;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=PUW38_00440 CP118116.1 Protein Homology CDS 101975 102352 . - 0 ID=cds-WJG81356.1;Parent=gene-PUW38_00440;Dbxref=NCBI_GP:WJG81356.1;Name=WJG81356.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=PUW38_00440;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WJG81356.1;transl_table=11 CP118116.1 Genbank gene 102355 103176 . - . ID=gene-PUW38_00445;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=PUW38_00445 CP118116.1 Protein Homology CDS 102355 103176 . - 0 ID=cds-WJG81357.1;Parent=gene-PUW38_00445;Dbxref=NCBI_GP:WJG81357.1;Name=WJG81357.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=PUW38_00445;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WJG81357.1;transl_table=11 CP118116.1 Genbank gene 103173 104162 . - . ID=gene-PUW38_00450;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=PUW38_00450 CP118116.1 Protein Homology CDS 103173 104162 . - 0 ID=cds-WJG81358.1;Parent=gene-PUW38_00450;Dbxref=NCBI_GP:WJG81358.1;Name=WJG81358.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=PUW38_00450;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WJG81358.1;transl_table=11 CP118116.1 Genbank gene 104162 105448 . - . ID=gene-PUW38_00455;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=PUW38_00455 CP118116.1 Protein Homology CDS 104162 105448 . - 0 ID=cds-WJG81359.1;Parent=gene-PUW38_00455;Dbxref=NCBI_GP:WJG81359.1;Name=WJG81359.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=PUW38_00455;product=peptidylprolyl isomerase SurA;protein_id=WJG81359.1;transl_table=11 CP118116.1 Genbank gene 105502 107862 . - . ID=gene-PUW38_00460;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=PUW38_00460 CP118116.1 Protein Homology CDS 105502 107862 . - 0 ID=cds-WJG81360.1;Parent=gene-PUW38_00460;Dbxref=NCBI_GP:WJG81360.1;Name=WJG81360.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=PUW38_00460;product=LPS assembly protein LptD;protein_id=WJG81360.1;transl_table=11 CP118116.1 Genbank gene 108116 108928 . + . ID=gene-PUW38_00465;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=PUW38_00465 CP118116.1 Protein Homology CDS 108116 108928 . + 0 ID=cds-WJG81361.1;Parent=gene-PUW38_00465;Dbxref=NCBI_GP:WJG81361.1;Name=WJG81361.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=PUW38_00465;product=co-chaperone DjlA;protein_id=WJG81361.1;transl_table=11 CP118116.1 Genbank gene 109023 109682 . - . ID=gene-PUW38_00470;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=PUW38_00470 CP118116.1 Protein Homology CDS 109023 109682 . - 0 ID=cds-WJG81362.1;Parent=gene-PUW38_00470;Dbxref=NCBI_GP:WJG81362.1;Name=WJG81362.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=PUW38_00470;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WJG81362.1;transl_table=11 CP118116.1 Genbank gene 109694 112600 . - . ID=gene-PUW38_00475;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=PUW38_00475 CP118116.1 Protein Homology CDS 109694 112600 . - 0 ID=cds-WJG81363.1;Parent=gene-PUW38_00475;Dbxref=NCBI_GP:WJG81363.1;Name=WJG81363.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=PUW38_00475;product=RNA polymerase-associated protein RapA;protein_id=WJG81363.1;transl_table=11 CP118116.1 Genbank pseudogene 112774 115124 . - . ID=gene-PUW38_00480;Name=polB;gbkey=Gene;gene=polB;gene_biotype=pseudogene;locus_tag=PUW38_00480;pseudo=true CP118116.1 Protein Homology CDS 112774 115124 . - 0 ID=cds-PUW38_00480;Parent=gene-PUW38_00480;Note=frameshifted;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=PUW38_00480;product=DNA polymerase II;pseudo=true;transl_table=11 CP118116.1 Genbank gene 115168 115788 . - . ID=gene-PUW38_00485;Name=PUW38_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00485 CP118116.1 Protein Homology CDS 115168 115788 . - 0 ID=cds-WJG81364.1;Parent=gene-PUW38_00485;Dbxref=NCBI_GP:WJG81364.1;Name=WJG81364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=PUW38_00485;product=YdcF family protein;protein_id=WJG81364.1;transl_table=11 CP118116.1 Genbank gene 116306 116725 . + . ID=gene-PUW38_00490;Name=PUW38_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00490 CP118116.1 Protein Homology CDS 116306 116725 . + 0 ID=cds-WJG81365.1;Parent=gene-PUW38_00490;Dbxref=NCBI_GP:WJG81365.1;Name=WJG81365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=PUW38_00490;product=DUF4751 family protein;protein_id=WJG81365.1;transl_table=11 CP118116.1 Genbank gene 116731 117426 . - . ID=gene-PUW38_00495;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PUW38_00495 CP118116.1 Protein Homology CDS 116731 117426 . - 0 ID=cds-WJG81366.1;Parent=gene-PUW38_00495;Dbxref=NCBI_GP:WJG81366.1;Name=WJG81366.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=PUW38_00495;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJG81366.1;transl_table=11 CP118116.1 Genbank gene 117567 119069 . - . ID=gene-PUW38_00500;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=PUW38_00500 CP118116.1 Protein Homology CDS 117567 119069 . - 0 ID=cds-WJG81367.1;Parent=gene-PUW38_00500;Dbxref=NCBI_GP:WJG81367.1;Name=WJG81367.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=PUW38_00500;product=L-arabinose isomerase;protein_id=WJG81367.1;transl_table=11 CP118116.1 Genbank gene 119080 120789 . - . ID=gene-PUW38_00505;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=PUW38_00505 CP118116.1 Protein Homology CDS 119080 120789 . - 0 ID=cds-WJG81368.1;Parent=gene-PUW38_00505;Dbxref=NCBI_GP:WJG81368.1;Name=WJG81368.1;Ontology_term=GO:0019568,GO:0008741;gbkey=CDS;gene=araB;go_function=ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=PUW38_00505;product=ribulokinase;protein_id=WJG81368.1;transl_table=11 CP118116.1 Genbank gene 121128 121973 . + . ID=gene-PUW38_00510;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=PUW38_00510 CP118116.1 Protein Homology CDS 121128 121973 . + 0 ID=cds-WJG81369.1;Parent=gene-PUW38_00510;Dbxref=NCBI_GP:WJG81369.1;Name=WJG81369.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=PUW38_00510;product=arabinose operon transcriptional regulator AraC;protein_id=WJG81369.1;transl_table=11 CP118116.1 Genbank gene 122092 122859 . + . ID=gene-PUW38_00515;Name=PUW38_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00515 CP118116.1 Protein Homology CDS 122092 122859 . + 0 ID=cds-WJG81370.1;Parent=gene-PUW38_00515;Dbxref=NCBI_GP:WJG81370.1;Name=WJG81370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=PUW38_00515;product=DedA family protein;protein_id=WJG81370.1;transl_table=11 CP118116.1 Genbank gene 122898 123605 . - . ID=gene-PUW38_00520;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=PUW38_00520 CP118116.1 Protein Homology CDS 122898 123605 . - 0 ID=cds-WJG81371.1;Parent=gene-PUW38_00520;Dbxref=NCBI_GP:WJG81371.1;Name=WJG81371.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=PUW38_00520;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WJG81371.1;transl_table=11 CP118116.1 Genbank gene 123589 125199 . - . ID=gene-PUW38_00525;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=PUW38_00525 CP118116.1 Protein Homology CDS 123589 125199 . - 0 ID=cds-WJG81372.1;Parent=gene-PUW38_00525;Dbxref=NCBI_GP:WJG81372.1;Name=WJG81372.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=PUW38_00525;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WJG81372.1;transl_table=11 CP118116.1 Genbank gene 125175 126158 . - . ID=gene-PUW38_00530;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=PUW38_00530 CP118116.1 Protein Homology CDS 125175 126158 . - 0 ID=cds-WJG81373.1;Parent=gene-PUW38_00530;Dbxref=NCBI_GP:WJG81373.1;Name=WJG81373.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=PUW38_00530;product=thiamine ABC transporter substrate binding subunit;protein_id=WJG81373.1;transl_table=11 CP118116.1 cmsearch riboswitch 126190 126289 . - . ID=id-CP118116.1:126190..126289;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118116.1 Genbank gene 126336 127994 . - . ID=gene-PUW38_00535;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=PUW38_00535 CP118116.1 Protein Homology CDS 126336 127994 . - 0 ID=cds-WJG81374.1;Parent=gene-PUW38_00535;Dbxref=NCBI_GP:WJG81374.1;Name=WJG81374.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=PUW38_00535;product=HTH-type transcriptional regulator SgrR;protein_id=WJG81374.1;transl_table=11 CP118116.1 Genbank gene 128087 128209 . + . ID=gene-PUW38_00540;Name=PUW38_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00540 CP118116.1 Protein Homology CDS 128087 128209 . + 0 ID=cds-WJG83130.1;Parent=gene-PUW38_00540;Dbxref=NCBI_GP:WJG83130.1;Name=WJG83130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=PUW38_00540;product=glucose uptake inhibitor SgrT;protein_id=WJG83130.1;transl_table=11 CP118116.1 Genbank gene 128528 128809 . + . ID=gene-PUW38_00545;Name=PUW38_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00545 CP118116.1 Protein Homology CDS 128528 128809 . + 0 ID=cds-WJG81375.1;Parent=gene-PUW38_00545;Dbxref=NCBI_GP:WJG81375.1;Name=WJG81375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264185.1;locus_tag=PUW38_00545;product=DUF5339 family protein;protein_id=WJG81375.1;transl_table=11 CP118116.1 Genbank gene 128863 129468 . - . ID=gene-PUW38_00550;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PUW38_00550 CP118116.1 Protein Homology CDS 128863 129468 . - 0 ID=cds-WJG81376.1;Parent=gene-PUW38_00550;Dbxref=NCBI_GP:WJG81376.1;Name=WJG81376.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=PUW38_00550;product=3-isopropylmalate dehydratase small subunit;protein_id=WJG81376.1;transl_table=11 CP118116.1 Genbank gene 129479 130879 . - . ID=gene-PUW38_00555;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PUW38_00555 CP118116.1 Protein Homology CDS 129479 130879 . - 0 ID=cds-WJG81377.1;Parent=gene-PUW38_00555;Dbxref=NCBI_GP:WJG81377.1;Name=WJG81377.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=PUW38_00555;product=3-isopropylmalate dehydratase large subunit;protein_id=WJG81377.1;transl_table=11 CP118116.1 Genbank gene 130882 131973 . - . ID=gene-PUW38_00560;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=PUW38_00560 CP118116.1 Protein Homology CDS 130882 131973 . - 0 ID=cds-WJG81378.1;Parent=gene-PUW38_00560;Dbxref=NCBI_GP:WJG81378.1;Name=WJG81378.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=PUW38_00560;product=3-isopropylmalate dehydrogenase;protein_id=WJG81378.1;transl_table=11 CP118116.1 Genbank gene 131973 133544 . - . ID=gene-PUW38_00565;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=PUW38_00565 CP118116.1 Protein Homology CDS 131973 133544 . - 0 ID=cds-WJG81379.1;Parent=gene-PUW38_00565;Dbxref=NCBI_GP:WJG81379.1;Name=WJG81379.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=PUW38_00565;product=2-isopropylmalate synthase;protein_id=WJG81379.1;transl_table=11 CP118116.1 Genbank gene 133632 133718 . - . ID=gene-PUW38_00570;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=PUW38_00570 CP118116.1 Protein Homology CDS 133632 133718 . - 0 ID=cds-WJG83131.1;Parent=gene-PUW38_00570;Dbxref=NCBI_GP:WJG83131.1;Name=WJG83131.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=PUW38_00570;product=leu operon leader peptide;protein_id=WJG83131.1;transl_table=11 CP118116.1 Genbank gene 134385 135329 . + . ID=gene-PUW38_00575;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=PUW38_00575 CP118116.1 Protein Homology CDS 134385 135329 . + 0 ID=cds-WJG81380.1;Parent=gene-PUW38_00575;Dbxref=NCBI_GP:WJG81380.1;Name=WJG81380.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=PUW38_00575;product=transcriptional regulator LeuO;protein_id=WJG81380.1;transl_table=11 CP118116.1 Genbank gene 135651 137375 . + . ID=gene-PUW38_00580;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=PUW38_00580 CP118116.1 Protein Homology CDS 135651 137375 . + 0 ID=cds-WJG81381.1;Parent=gene-PUW38_00580;Dbxref=NCBI_GP:WJG81381.1;Name=WJG81381.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=PUW38_00580;product=acetolactate synthase 3 large subunit;protein_id=WJG81381.1;transl_table=11 CP118116.1 Genbank gene 137378 137869 . + . ID=gene-PUW38_00585;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PUW38_00585 CP118116.1 Protein Homology CDS 137378 137869 . + 0 ID=cds-WJG83132.1;Parent=gene-PUW38_00585;Dbxref=NCBI_GP:WJG83132.1;Name=WJG83132.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=PUW38_00585;product=acetolactate synthase small subunit;protein_id=WJG83132.1;transl_table=11 CP118116.1 Genbank gene 138153 139157 . + . ID=gene-PUW38_00590;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=PUW38_00590 CP118116.1 Protein Homology CDS 138153 139157 . + 0 ID=cds-WJG81382.1;Parent=gene-PUW38_00590;Dbxref=NCBI_GP:WJG81382.1;Name=WJG81382.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=PUW38_00590;product=catabolite repressor/activator;protein_id=WJG81382.1;transl_table=11 CP118116.1 Genbank gene 139763 140221 . + . ID=gene-PUW38_00595;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=PUW38_00595 CP118116.1 Protein Homology CDS 139763 140221 . + 0 ID=cds-WJG81383.1;Parent=gene-PUW38_00595;Dbxref=NCBI_GP:WJG81383.1;Name=WJG81383.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=PUW38_00595;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WJG81383.1;transl_table=11 CP118116.1 Genbank gene 140223 141164 . + . ID=gene-PUW38_00600;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=PUW38_00600 CP118116.1 Protein Homology CDS 140223 141164 . + 0 ID=cds-WJG81384.1;Parent=gene-PUW38_00600;Dbxref=NCBI_GP:WJG81384.1;Name=WJG81384.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=PUW38_00600;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WJG81384.1;transl_table=11 CP118116.1 Genbank gene 141161 141526 . + . ID=gene-PUW38_00605;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=PUW38_00605 CP118116.1 Protein Homology CDS 141161 141526 . + 0 ID=cds-WJG81385.1;Parent=gene-PUW38_00605;Dbxref=NCBI_GP:WJG81385.1;Name=WJG81385.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=PUW38_00605;product=cell division protein FtsL;protein_id=WJG81385.1;transl_table=11 CP118116.1 Genbank gene 141542 143308 . + . ID=gene-PUW38_00610;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=PUW38_00610 CP118116.1 Protein Homology CDS 141542 143308 . + 0 ID=cds-WJG81386.1;Parent=gene-PUW38_00610;Dbxref=NCBI_GP:WJG81386.1;Name=WJG81386.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=PUW38_00610;product=peptidoglycan glycosyltransferase FtsI;protein_id=WJG81386.1;transl_table=11 CP118116.1 Genbank gene 143295 144782 . + . ID=gene-PUW38_00615;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=PUW38_00615 CP118116.1 Protein Homology CDS 143295 144782 . + 0 ID=cds-WJG81387.1;Parent=gene-PUW38_00615;Dbxref=NCBI_GP:WJG81387.1;Name=WJG81387.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=PUW38_00615;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WJG81387.1;transl_table=11 CP118116.1 Genbank gene 144779 146137 . + . ID=gene-PUW38_00620;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=PUW38_00620 CP118116.1 Protein Homology CDS 144779 146137 . + 0 ID=cds-WJG81388.1;Parent=gene-PUW38_00620;Dbxref=NCBI_GP:WJG81388.1;Name=WJG81388.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=PUW38_00620;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WJG81388.1;transl_table=11 CP118116.1 Genbank gene 146131 147213 . + . ID=gene-PUW38_00625;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=PUW38_00625 CP118116.1 Protein Homology CDS 146131 147213 . + 0 ID=cds-WJG81389.1;Parent=gene-PUW38_00625;Dbxref=NCBI_GP:WJG81389.1;Name=WJG81389.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=PUW38_00625;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WJG81389.1;transl_table=11 CP118116.1 Genbank gene 147216 148532 . + . ID=gene-PUW38_00630;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=PUW38_00630 CP118116.1 Protein Homology CDS 147216 148532 . + 0 ID=cds-WJG81390.1;Parent=gene-PUW38_00630;Dbxref=NCBI_GP:WJG81390.1;Name=WJG81390.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=PUW38_00630;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WJG81390.1;transl_table=11 CP118116.1 Genbank pseudogene 148715 149775 . + . ID=gene-PUW38_00635;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=pseudogene;locus_tag=PUW38_00635;pseudo=true CP118116.1 Protein Homology CDS 148715 149775 . + 0 ID=cds-PUW38_00635;Parent=gene-PUW38_00635;Note=frameshifted;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF013279.2;locus_tag=PUW38_00635;product=cell division protein FtsW;pseudo=true;transl_table=11 CP118116.1 Genbank gene 149772 150839 . + . ID=gene-PUW38_00640;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=PUW38_00640 CP118116.1 Protein Homology CDS 149772 150839 . + 0 ID=cds-WJG81391.1;Parent=gene-PUW38_00640;Dbxref=NCBI_GP:WJG81391.1;Name=WJG81391.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=PUW38_00640;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WJG81391.1;transl_table=11 CP118116.1 Genbank gene 150958 152433 . + . ID=gene-PUW38_00645;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=PUW38_00645 CP118116.1 Protein Homology CDS 150958 152433 . + 0 ID=cds-WJG81392.1;Parent=gene-PUW38_00645;Dbxref=NCBI_GP:WJG81392.1;Name=WJG81392.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=PUW38_00645;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WJG81392.1;transl_table=11 CP118116.1 Genbank gene 152426 153346 . + . ID=gene-PUW38_00650;Name=PUW38_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00650 CP118116.1 Protein Homology CDS 152426 153346 . + 0 ID=cds-WJG81393.1;Parent=gene-PUW38_00650;Dbxref=NCBI_GP:WJG81393.1;Name=WJG81393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=PUW38_00650;product=D-alanine--D-alanine ligase;protein_id=WJG81393.1;transl_table=11 CP118116.1 Genbank gene 153348 154178 . + . ID=gene-PUW38_00655;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=PUW38_00655 CP118116.1 Protein Homology CDS 153348 154178 . + 0 ID=cds-WJG81394.1;Parent=gene-PUW38_00655;Dbxref=NCBI_GP:WJG81394.1;Name=WJG81394.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=PUW38_00655;product=cell division protein FtsQ;protein_id=WJG81394.1;transl_table=11 CP118116.1 Genbank gene 154175 155437 . + . ID=gene-PUW38_00660;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=PUW38_00660 CP118116.1 Protein Homology CDS 154175 155437 . + 0 ID=cds-WJG81395.1;Parent=gene-PUW38_00660;Dbxref=NCBI_GP:WJG81395.1;Name=WJG81395.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=PUW38_00660;product=cell division protein FtsA;protein_id=WJG81395.1;transl_table=11 CP118116.1 Genbank pseudogene 155497 156647 . + . ID=gene-PUW38_00665;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=pseudogene;locus_tag=PUW38_00665;pseudo=true CP118116.1 Protein Homology CDS 155497 156647 . + 0 ID=cds-PUW38_00665;Parent=gene-PUW38_00665;Note=frameshifted;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=PUW38_00665;product=cell division protein FtsZ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 156748 157665 . + . ID=gene-PUW38_00670;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=PUW38_00670 CP118116.1 Protein Homology CDS 156748 157665 . + 0 ID=cds-WJG81396.1;Parent=gene-PUW38_00670;Dbxref=NCBI_GP:WJG81396.1;Name=WJG81396.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=PUW38_00670;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WJG81396.1;transl_table=11 CP118116.1 Genbank gene 157943 158440 . + . ID=gene-PUW38_00675;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=PUW38_00675 CP118116.1 Protein Homology CDS 157943 158440 . + 0 ID=cds-WJG81397.1;Parent=gene-PUW38_00675;Dbxref=NCBI_GP:WJG81397.1;Name=WJG81397.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014335.1;locus_tag=PUW38_00675;product=secA translation cis-regulator SecM;protein_id=WJG81397.1;transl_table=11 CP118116.1 Genbank gene 158502 161207 . + . ID=gene-PUW38_00680;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=PUW38_00680 CP118116.1 Protein Homology CDS 158502 161207 . + 0 ID=cds-WJG81398.1;Parent=gene-PUW38_00680;Dbxref=NCBI_GP:WJG81398.1;Name=WJG81398.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=PUW38_00680;product=preprotein translocase subunit SecA;protein_id=WJG81398.1;transl_table=11 CP118116.1 Genbank gene 161359 161754 . + . ID=gene-PUW38_00685;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=PUW38_00685 CP118116.1 Protein Homology CDS 161359 161754 . + 0 ID=cds-WJG81399.1;Parent=gene-PUW38_00685;Dbxref=NCBI_GP:WJG81399.1;Name=WJG81399.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459142.1;locus_tag=PUW38_00685;product=8-oxo-dGTP diphosphatase MutT;protein_id=WJG81399.1;transl_table=11 CP118116.1 Genbank gene 161788 162777 . - . ID=gene-PUW38_00690;Name=PUW38_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00690 CP118116.1 Protein Homology CDS 161788 162777 . - 0 ID=cds-WJG81400.1;Parent=gene-PUW38_00690;Dbxref=NCBI_GP:WJG81400.1;Name=WJG81400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=PUW38_00690;product=aldo/keto reductase;protein_id=WJG81400.1;transl_table=11 CP118116.1 Genbank gene 162863 163804 . + . ID=gene-PUW38_00695;Name=PUW38_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00695 CP118116.1 Protein Homology CDS 162863 163804 . + 0 ID=cds-WJG81401.1;Parent=gene-PUW38_00695;Dbxref=NCBI_GP:WJG81401.1;Name=WJG81401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=PUW38_00695;product=LysR family transcriptional regulator;protein_id=WJG81401.1;transl_table=11 CP118116.1 Genbank gene 163801 163992 . - . ID=gene-PUW38_00700;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=PUW38_00700 CP118116.1 Protein Homology CDS 163801 163992 . - 0 ID=cds-WJG81402.1;Parent=gene-PUW38_00700;Dbxref=NCBI_GP:WJG81402.1;Name=WJG81402.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=PUW38_00700;product=DNA gyrase inhibitor YacG;protein_id=WJG81402.1;transl_table=11 CP118116.1 Genbank gene 164002 164745 . - . ID=gene-PUW38_00705;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=PUW38_00705 CP118116.1 Protein Homology CDS 164002 164745 . - 0 ID=cds-WJG81403.1;Parent=gene-PUW38_00705;Dbxref=NCBI_GP:WJG81403.1;Name=WJG81403.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=PUW38_00705;product=cell division protein ZapD;protein_id=WJG81403.1;transl_table=11 CP118116.1 Genbank gene 164745 165365 . - . ID=gene-PUW38_00710;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=PUW38_00710 CP118116.1 Protein Homology CDS 164745 165365 . - 0 ID=cds-WJG81404.1;Parent=gene-PUW38_00710;Dbxref=NCBI_GP:WJG81404.1;Name=WJG81404.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=PUW38_00710;product=dephospho-CoA kinase;protein_id=WJG81404.1;transl_table=11 CP118116.1 Genbank gene 165591 166634 . + . ID=gene-PUW38_00715;Name=PUW38_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00715 CP118116.1 Protein Homology CDS 165591 166634 . + 0 ID=cds-WJG81405.1;Parent=gene-PUW38_00715;Dbxref=NCBI_GP:WJG81405.1;Name=WJG81405.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=PUW38_00715;product=GMP reductase;protein_id=WJG81405.1;transl_table=11 CP118116.1 Genbank gene 166665 167867 . - . ID=gene-PUW38_00720;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=PUW38_00720 CP118116.1 Protein Homology CDS 166665 167867 . - 0 ID=cds-WJG81406.1;Parent=gene-PUW38_00720;Dbxref=NCBI_GP:WJG81406.1;Name=WJG81406.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=PUW38_00720;product=protein transport protein HofC;protein_id=WJG81406.1;transl_table=11 CP118116.1 Genbank gene 167896 169242 . - . ID=gene-PUW38_00725;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=PUW38_00725 CP118116.1 Protein Homology CDS 167896 169242 . - 0 ID=cds-WJG81407.1;Parent=gene-PUW38_00725;Dbxref=NCBI_GP:WJG81407.1;Name=WJG81407.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=PUW38_00725;product=type II secretion system protein GspE;protein_id=WJG81407.1;transl_table=11 CP118116.1 Genbank gene 169252 169689 . - . ID=gene-PUW38_00730;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=PUW38_00730 CP118116.1 Protein Homology CDS 169252 169689 . - 0 ID=cds-WJG81408.1;Parent=gene-PUW38_00730;Dbxref=NCBI_GP:WJG81408.1;Name=WJG81408.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=PUW38_00730;product=prepilin peptidase-dependent pilin;protein_id=WJG81408.1;transl_table=11 CP118116.1 Genbank gene 169911 170804 . - . ID=gene-PUW38_00735;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=PUW38_00735 CP118116.1 Protein Homology CDS 169911 170804 . - 0 ID=cds-WJG81409.1;Parent=gene-PUW38_00735;Dbxref=NCBI_GP:WJG81409.1;Name=WJG81409.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=PUW38_00735;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WJG81409.1;transl_table=11 CP118116.1 Genbank gene 170892 171455 . + . ID=gene-PUW38_00740;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=PUW38_00740 CP118116.1 Protein Homology CDS 170892 171455 . + 0 ID=cds-WJG81410.1;Parent=gene-PUW38_00740;Dbxref=NCBI_GP:WJG81410.1;Name=WJG81410.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=PUW38_00740;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WJG81410.1;transl_table=11 CP118116.1 Genbank gene 171452 172306 . + . ID=gene-PUW38_00745;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=PUW38_00745 CP118116.1 Protein Homology CDS 171452 172306 . + 0 ID=cds-WJG81411.1;Parent=gene-PUW38_00745;Dbxref=NCBI_GP:WJG81411.1;Name=WJG81411.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=PUW38_00745;product=beta-lactamase regulator AmpE;protein_id=WJG81411.1;transl_table=11 CP118116.1 Genbank gene 172398 173348 . - . ID=gene-PUW38_00750;Name=PUW38_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00750 CP118116.1 Protein Homology CDS 172398 173348 . - 0 ID=cds-WJG81412.1;Parent=gene-PUW38_00750;Dbxref=NCBI_GP:WJG81412.1;Name=WJG81412.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=PUW38_00750;product=family 43 glycosylhydrolase;protein_id=WJG81412.1;transl_table=11 CP118116.1 Genbank gene 173348 174754 . - . ID=gene-PUW38_00755;Name=PUW38_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00755 CP118116.1 Protein Homology CDS 173348 174754 . - 0 ID=cds-WJG81413.1;Parent=gene-PUW38_00755;Dbxref=NCBI_GP:WJG81413.1;Name=WJG81413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=PUW38_00755;product=MFS transporter;protein_id=WJG81413.1;transl_table=11 CP118116.1 Genbank gene 174918 176291 . - . ID=gene-PUW38_00760;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=PUW38_00760 CP118116.1 Protein Homology CDS 174918 176291 . - 0 ID=cds-WJG83133.1;Parent=gene-PUW38_00760;Dbxref=NCBI_GP:WJG83133.1;Name=WJG83133.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=PUW38_00760;product=aromatic amino acid transporter AroP;protein_id=WJG83133.1;transl_table=11 CP118116.1 Genbank gene 176854 177606 . + . ID=gene-PUW38_00765;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=PUW38_00765 CP118116.1 Protein Homology CDS 176854 177606 . + 0 ID=cds-WJG81414.1;Parent=gene-PUW38_00765;Dbxref=NCBI_GP:WJG81414.1;Name=WJG81414.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331770.1;locus_tag=PUW38_00765;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WJG81414.1;transl_table=11 CP118116.1 Genbank gene 177778 180441 . + . ID=gene-PUW38_00770;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=PUW38_00770 CP118116.1 Protein Homology CDS 177778 180441 . + 0 ID=cds-WJG81415.1;Parent=gene-PUW38_00770;Dbxref=NCBI_GP:WJG81415.1;Name=WJG81415.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=PUW38_00770;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WJG81415.1;transl_table=11 CP118116.1 Genbank gene 180456 182339 . + . ID=gene-PUW38_00775;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=PUW38_00775 CP118116.1 Protein Homology CDS 180456 182339 . + 0 ID=cds-WJG81416.1;Parent=gene-PUW38_00775;Dbxref=NCBI_GP:WJG81416.1;Name=WJG81416.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=PUW38_00775;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WJG81416.1;transl_table=11 CP118116.1 Genbank gene 182541 183965 . + . ID=gene-PUW38_00780;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PUW38_00780 CP118116.1 Protein Homology CDS 182541 183965 . + 0 ID=cds-WJG83134.1;Parent=gene-PUW38_00780;Dbxref=NCBI_GP:WJG83134.1;Name=WJG83134.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=PUW38_00780;product=dihydrolipoyl dehydrogenase;protein_id=WJG83134.1;transl_table=11 CP118116.1 Genbank gene 184254 184538 . + . ID=gene-PUW38_00785;Name=PUW38_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00785 CP118116.1 Protein Homology CDS 184254 184538 . + 0 ID=cds-WJG81417.1;Parent=gene-PUW38_00785;Dbxref=NCBI_GP:WJG81417.1;Name=WJG81417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=PUW38_00785;product=hypothetical protein;protein_id=WJG81417.1;transl_table=11 CP118116.1 Genbank gene 184576 185367 . - . ID=gene-PUW38_00790;Name=PUW38_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00790 CP118116.1 Protein Homology CDS 184576 185367 . - 0 ID=cds-WJG81418.1;Parent=gene-PUW38_00790;Dbxref=NCBI_GP:WJG81418.1;Name=WJG81418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=PUW38_00790;product=DUF2950 family protein;protein_id=WJG81418.1;transl_table=11 CP118116.1 Genbank gene 185380 187002 . - . ID=gene-PUW38_00795;Name=PUW38_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00795 CP118116.1 Protein Homology CDS 185380 187002 . - 0 ID=cds-WJG81419.1;Parent=gene-PUW38_00795;Dbxref=NCBI_GP:WJG81419.1;Name=WJG81419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=PUW38_00795;product=DUF3300 domain-containing protein;protein_id=WJG81419.1;transl_table=11 CP118116.1 Genbank gene 187391 189988 . + . ID=gene-PUW38_00800;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=PUW38_00800 CP118116.1 Protein Homology CDS 187391 189988 . + 0 ID=cds-WJG81420.1;Parent=gene-PUW38_00800;Dbxref=NCBI_GP:WJG81420.1;Name=WJG81420.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=PUW38_00800;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WJG81420.1;transl_table=11 CP118116.1 Genbank gene 190028 190492 . - . ID=gene-PUW38_00805;Name=PUW38_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00805 CP118116.1 Protein Homology CDS 190028 190492 . - 0 ID=cds-WJG81421.1;Parent=gene-PUW38_00805;Dbxref=NCBI_GP:WJG81421.1;Name=WJG81421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=PUW38_00805;product=hypothetical protein;protein_id=WJG81421.1;transl_table=11 CP118116.1 Genbank gene 190909 191232 . - . ID=gene-PUW38_00810;Name=PUW38_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00810 CP118116.1 Protein Homology CDS 190909 191232 . - 0 ID=cds-WJG81422.1;Parent=gene-PUW38_00810;Dbxref=NCBI_GP:WJG81422.1;Name=WJG81422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=PUW38_00810;product=phosphotyrosine protein phosphatase;protein_id=WJG81422.1;transl_table=11 CP118116.1 Genbank gene 191503 191865 . + . ID=gene-PUW38_00815;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=PUW38_00815 CP118116.1 Protein Homology CDS 191503 191865 . + 0 ID=cds-WJG81423.1;Parent=gene-PUW38_00815;Dbxref=NCBI_GP:WJG81423.1;Name=WJG81423.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=PUW38_00815;product=protein YacL;protein_id=WJG81423.1;transl_table=11 CP118116.1 Genbank gene 192100 193053 . + . ID=gene-PUW38_00820;Name=PUW38_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00820 CP118116.1 Protein Homology CDS 192100 193053 . + 0 ID=cds-WJG81424.1;Parent=gene-PUW38_00820;Dbxref=NCBI_GP:WJG81424.1;Name=WJG81424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=PUW38_00820;product=2-keto-3-deoxygluconate permease 1;protein_id=WJG81424.1;transl_table=11 CP118116.1 Genbank gene 193050 194321 . + . ID=gene-PUW38_00825;Name=PUW38_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00825 CP118116.1 Protein Homology CDS 193050 194321 . + 0 ID=cds-WJG81425.1;Parent=gene-PUW38_00825;Dbxref=NCBI_GP:WJG81425.1;Name=WJG81425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=PUW38_00825;product=D-threonate kinase;protein_id=WJG81425.1;transl_table=11 CP118116.1 Genbank gene 194311 195294 . + . ID=gene-PUW38_00830;Name=PUW38_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00830 CP118116.1 Protein Homology CDS 194311 195294 . + 0 ID=cds-WJG81426.1;Parent=gene-PUW38_00830;Dbxref=NCBI_GP:WJG81426.1;Name=WJG81426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=PUW38_00830;product=D-threonate 4-phosphate dehydrogenase;protein_id=WJG81426.1;transl_table=11 CP118116.1 Genbank gene 195304 196071 . + . ID=gene-PUW38_00835;Name=PUW38_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00835 CP118116.1 Protein Homology CDS 195304 196071 . + 0 ID=cds-WJG81427.1;Parent=gene-PUW38_00835;Dbxref=NCBI_GP:WJG81427.1;Name=WJG81427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=PUW38_00835;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG81427.1;transl_table=11 CP118116.1 Genbank gene 196101 196895 . - . ID=gene-PUW38_00840;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=PUW38_00840 CP118116.1 Protein Homology CDS 196101 196895 . - 0 ID=cds-WJG81428.1;Parent=gene-PUW38_00840;Dbxref=NCBI_GP:WJG81428.1;Name=WJG81428.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=PUW38_00840;product=adenosylmethionine decarboxylase;protein_id=WJG81428.1;transl_table=11 CP118116.1 Genbank gene 196916 197776 . - . ID=gene-PUW38_00845;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=PUW38_00845 CP118116.1 Protein Homology CDS 196916 197776 . - 0 ID=cds-WJG81429.1;Parent=gene-PUW38_00845;Dbxref=NCBI_GP:WJG81429.1;Name=WJG81429.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=PUW38_00845;product=polyamine aminopropyltransferase;protein_id=WJG81429.1;transl_table=11 CP118116.1 Genbank pseudogene 197883 198229 . - . ID=gene-PUW38_00850;Name=PUW38_00850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00850;pseudo=true CP118116.1 Protein Homology CDS 197883 198229 . - 0 ID=cds-PUW38_00850;Parent=gene-PUW38_00850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=PUW38_00850;product=YacC family pilotin-like protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 198431 200040 . + . ID=gene-PUW38_00855;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=pseudogene;locus_tag=PUW38_00855;pseudo=true CP118116.1 Protein Homology CDS 198431 200040 . + 0 ID=cds-PUW38_00855;Parent=gene-PUW38_00855;Note=frameshifted;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=PUW38_00855;product=multicopper oxidase CueO;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 200118 202508 . - . ID=gene-PUW38_00860;Name=PUW38_00860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00860;pseudo=true CP118116.1 Protein Homology CDS 200118 202508 . - 0 ID=cds-PUW38_00860;Parent=gene-PUW38_00860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=PUW38_00860;product=pyrroloquinoline quinone-dependent dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 202714 203250 . + . ID=gene-PUW38_00865;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=PUW38_00865 CP118116.1 Protein Homology CDS 202714 203250 . + 0 ID=cds-WJG81430.1;Parent=gene-PUW38_00865;Dbxref=NCBI_GP:WJG81430.1;Name=WJG81430.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=PUW38_00865;product=hypoxanthine phosphoribosyltransferase;protein_id=WJG81430.1;transl_table=11 CP118116.1 Genbank gene 203308 203970 . - . ID=gene-PUW38_00870;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=PUW38_00870 CP118116.1 Protein Homology CDS 203308 203970 . - 0 ID=cds-WJG81431.1;Parent=gene-PUW38_00870;Dbxref=NCBI_GP:WJG81431.1;Name=WJG81431.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=PUW38_00870;product=carbonate dehydratase;protein_id=WJG81431.1;transl_table=11 CP118116.1 Genbank gene 204079 205005 . + . ID=gene-PUW38_00875;Name=PUW38_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00875 CP118116.1 Protein Homology CDS 204079 205005 . + 0 ID=cds-WJG81432.1;Parent=gene-PUW38_00875;Dbxref=NCBI_GP:WJG81432.1;Name=WJG81432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=PUW38_00875;product=ABC transporter ATP-binding protein;protein_id=WJG81432.1;transl_table=11 CP118116.1 Genbank gene 205002 205772 . + . ID=gene-PUW38_00880;Name=PUW38_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00880 CP118116.1 Protein Homology CDS 205002 205772 . + 0 ID=cds-WJG81433.1;Parent=gene-PUW38_00880;Dbxref=NCBI_GP:WJG81433.1;Name=WJG81433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=PUW38_00880;product=ABC transporter permease;protein_id=WJG81433.1;transl_table=11 CP118116.1 Genbank gene 205892 206971 . - . ID=gene-PUW38_00885;Name=PUW38_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00885 CP118116.1 Protein Homology CDS 205892 206971 . - 0 ID=cds-WJG81434.1;Parent=gene-PUW38_00885;Dbxref=NCBI_GP:WJG81434.1;Name=WJG81434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=PUW38_00885;product=fimbrial protein;protein_id=WJG81434.1;transl_table=11 CP118116.1 Genbank pseudogene 206980 209526 . - . ID=gene-PUW38_00890;Name=PUW38_00890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00890;pseudo=true CP118116.1 Protein Homology CDS 206980 209526 . - 0 ID=cds-PUW38_00890;Parent=gene-PUW38_00890;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=PUW38_00890;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 209553 210236 . - . ID=gene-PUW38_00895;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=PUW38_00895 CP118116.1 Protein Homology CDS 209553 210236 . - 0 ID=cds-WJG81435.1;Parent=gene-PUW38_00895;Dbxref=NCBI_GP:WJG81435.1;Name=WJG81435.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=PUW38_00895;product=fimbrial biogenesis chaperone StiB;protein_id=WJG81435.1;transl_table=11 CP118116.1 Genbank gene 210284 210823 . - . ID=gene-PUW38_00900;Name=PUW38_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00900 CP118116.1 Protein Homology CDS 210284 210823 . - 0 ID=cds-WJG81436.1;Parent=gene-PUW38_00900;Dbxref=NCBI_GP:WJG81436.1;Name=WJG81436.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=PUW38_00900;product=fimbrial protein;protein_id=WJG81436.1;transl_table=11 CP118116.1 Genbank pseudogene 211192 211621 . + . ID=gene-PUW38_00905;Name=PUW38_00905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_00905;pseudo=true CP118116.1 Protein Homology CDS 211192 211621 . + 0 ID=cds-PUW38_00905;Parent=gene-PUW38_00905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=PUW38_00905;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 211683 212912 . + . ID=gene-PUW38_00910;Name=PUW38_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00910 CP118116.1 Protein Homology CDS 211683 212912 . + 0 ID=cds-WJG81437.1;Parent=gene-PUW38_00910;Dbxref=NCBI_GP:WJG81437.1;Name=WJG81437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=PUW38_00910;product=polysaccharide deacetylase family protein;protein_id=WJG81437.1;transl_table=11 CP118116.1 Genbank gene 212919 213299 . - . ID=gene-PUW38_00915;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=PUW38_00915 CP118116.1 Protein Homology CDS 212919 213299 . - 0 ID=cds-WJG81438.1;Parent=gene-PUW38_00915;Dbxref=NCBI_GP:WJG81438.1;Name=WJG81438.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=PUW38_00915;product=aspartate 1-decarboxylase;protein_id=WJG81438.1;transl_table=11 CP118116.1 Genbank pseudogene 213394 214247 . - . ID=gene-PUW38_00920;Name=panC;gbkey=Gene;gene=panC;gene_biotype=pseudogene;locus_tag=PUW38_00920;pseudo=true CP118116.1 Protein Homology CDS 213394 214247 . - 0 ID=cds-PUW38_00920;Parent=gene-PUW38_00920;Note=frameshifted;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=PUW38_00920;product=pantoate--beta-alanine ligase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 214373 215164 . - . ID=gene-PUW38_00925;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=PUW38_00925 CP118116.1 Protein Homology CDS 214373 215164 . - 0 ID=cds-WJG81439.1;Parent=gene-PUW38_00925;Dbxref=NCBI_GP:WJG81439.1;Name=WJG81439.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=PUW38_00925;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WJG81439.1;transl_table=11 CP118116.1 Genbank gene 215285 215764 . - . ID=gene-PUW38_00930;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=PUW38_00930 CP118116.1 Protein Homology CDS 215285 215764 . - 0 ID=cds-WJG81440.1;Parent=gene-PUW38_00930;Dbxref=NCBI_GP:WJG81440.1;Name=WJG81440.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=PUW38_00930;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WJG81440.1;transl_table=11 CP118116.1 Genbank gene 215761 217158 . - . ID=gene-PUW38_00935;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=PUW38_00935 CP118116.1 Protein Homology CDS 215761 217158 . - 0 ID=cds-WJG83135.1;Parent=gene-PUW38_00935;Dbxref=NCBI_GP:WJG83135.1;Name=WJG83135.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=PUW38_00935;product=polynucleotide adenylyltransferase PcnB;protein_id=WJG83135.1;transl_table=11 CP118116.1 Genbank gene 217320 218216 . - . ID=gene-PUW38_00940;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=PUW38_00940 CP118116.1 Protein Homology CDS 217320 218216 . - 0 ID=cds-WJG81441.1;Parent=gene-PUW38_00940;Dbxref=NCBI_GP:WJG81441.1;Name=WJG81441.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=PUW38_00940;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WJG81441.1;transl_table=11 CP118116.1 Genbank gene 218285 218740 . - . ID=gene-PUW38_00945;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=PUW38_00945 CP118116.1 Protein Homology CDS 218285 218740 . - 0 ID=cds-WJG81442.1;Parent=gene-PUW38_00945;Dbxref=NCBI_GP:WJG81442.1;Name=WJG81442.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=PUW38_00945;product=RNA polymerase-binding protein DksA;protein_id=WJG81442.1;transl_table=11 CP118116.1 Genbank gene 218917 219621 . - . ID=gene-PUW38_00950;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=PUW38_00950 CP118116.1 Protein Homology CDS 218917 219621 . - 0 ID=cds-WJG81443.1;Parent=gene-PUW38_00950;Dbxref=NCBI_GP:WJG81443.1;Name=WJG81443.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=PUW38_00950;product=DNA/RNA nuclease SfsA;protein_id=WJG81443.1;transl_table=11 CP118116.1 Genbank gene 219638 220168 . - . ID=gene-PUW38_00955;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=PUW38_00955 CP118116.1 Protein Homology CDS 219638 220168 . - 0 ID=cds-WJG81444.1;Parent=gene-PUW38_00955;Dbxref=NCBI_GP:WJG81444.1;Name=WJG81444.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=PUW38_00955;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WJG81444.1;transl_table=11 CP118116.1 Genbank gene 220241 222670 . + . ID=gene-PUW38_00960;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=PUW38_00960 CP118116.1 Protein Homology CDS 220241 222670 . + 0 ID=cds-WJG83136.1;Parent=gene-PUW38_00960;Dbxref=NCBI_GP:WJG83136.1;Name=WJG83136.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=PUW38_00960;product=ATP-dependent helicase HrpB;protein_id=WJG83136.1;transl_table=11 CP118116.1 Genbank gene 222811 225333 . + . ID=gene-PUW38_00965;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=PUW38_00965 CP118116.1 Protein Homology CDS 222811 225333 . + 0 ID=cds-WJG81445.1;Parent=gene-PUW38_00965;Dbxref=NCBI_GP:WJG81445.1;Name=WJG81445.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=PUW38_00965;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WJG81445.1;transl_table=11 CP118116.1 Genbank gene 225626 227815 . + . ID=gene-PUW38_00970;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=PUW38_00970 CP118116.1 Protein Homology CDS 225626 227815 . + 0 ID=cds-WJG81446.1;Parent=gene-PUW38_00970;Dbxref=NCBI_GP:WJG81446.1;Name=WJG81446.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=PUW38_00970;product=ferrichrome porin FhuA;protein_id=WJG81446.1;transl_table=11 CP118116.1 Genbank gene 227864 228661 . + . ID=gene-PUW38_00975;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=PUW38_00975 CP118116.1 Protein Homology CDS 227864 228661 . + 0 ID=cds-WJG81447.1;Parent=gene-PUW38_00975;Dbxref=NCBI_GP:WJG81447.1;Name=WJG81447.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=PUW38_00975;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WJG81447.1;transl_table=11 CP118116.1 Genbank gene 228661 229551 . + . ID=gene-PUW38_00980;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=PUW38_00980 CP118116.1 Protein Homology CDS 228661 229551 . + 0 ID=cds-WJG81448.1;Parent=gene-PUW38_00980;Dbxref=NCBI_GP:WJG81448.1;Name=WJG81448.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=PUW38_00980;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WJG81448.1;transl_table=11 CP118116.1 Genbank pseudogene 229566 231604 . + . ID=gene-PUW38_00985;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=pseudogene;locus_tag=PUW38_00985;pseudo=true CP118116.1 Protein Homology CDS 229566 231604 . + 0 ID=cds-PUW38_00985;Parent=gene-PUW38_00985;Note=frameshifted;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=PUW38_00985;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 232544 233104 . + . ID=gene-PUW38_00990;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=PUW38_00990 CP118116.1 Protein Homology CDS 232544 233104 . + 0 ID=cds-WJG81449.1;Parent=gene-PUW38_00990;Dbxref=NCBI_GP:WJG81449.1;Name=WJG81449.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=PUW38_00990;product=fimbrial major subunit StfA;protein_id=WJG81449.1;transl_table=11 CP118116.1 Genbank gene 233190 235847 . + . ID=gene-PUW38_00995;Name=PUW38_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_00995 CP118116.1 Protein Homology CDS 233190 235847 . + 0 ID=cds-WJG81450.1;Parent=gene-PUW38_00995;Dbxref=NCBI_GP:WJG81450.1;Name=WJG81450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=PUW38_00995;product=fimbrial biogenesis outer membrane usher protein;protein_id=WJG81450.1;transl_table=11 CP118116.1 Genbank gene 235865 236617 . + . ID=gene-PUW38_01000;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=PUW38_01000 CP118116.1 Protein Homology CDS 235865 236617 . + 0 ID=cds-WJG81451.1;Parent=gene-PUW38_01000;Dbxref=NCBI_GP:WJG81451.1;Name=WJG81451.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=PUW38_01000;product=fimbrial chaperone StfD;protein_id=WJG81451.1;transl_table=11 CP118116.1 Genbank gene 236636 237148 . + . ID=gene-PUW38_01005;Name=PUW38_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01005 CP118116.1 Protein Homology CDS 236636 237148 . + 0 ID=cds-WJG81452.1;Parent=gene-PUW38_01005;Dbxref=NCBI_GP:WJG81452.1;Name=WJG81452.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=PUW38_01005;product=fimbrial protein;protein_id=WJG81452.1;transl_table=11 CP118116.1 Genbank pseudogene 237145 237621 . + . ID=gene-PUW38_01010;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=pseudogene;locus_tag=PUW38_01010;pseudo=true CP118116.1 Protein Homology CDS 237145 237621 . + 0 ID=cds-PUW38_01010;Parent=gene-PUW38_01010;Note=internal stop;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=PUW38_01010;product=fimbrial minor subunit StfF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 237621 238151 . + . ID=gene-PUW38_01015;Name=PUW38_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01015 CP118116.1 Protein Homology CDS 237621 238151 . + 0 ID=cds-WJG81453.1;Parent=gene-PUW38_01015;Dbxref=NCBI_GP:WJG81453.1;Name=WJG81453.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=PUW38_01015;product=fimbrial protein;protein_id=WJG81453.1;transl_table=11 CP118116.1 Genbank pseudogene 238151 238992 . + . ID=gene-PUW38_01020;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=pseudogene;locus_tag=PUW38_01020;pseudo=true CP118116.1 Protein Homology CDS 238151 238992 . + 0 ID=cds-PUW38_01020;Parent=gene-PUW38_01020;Note=frameshifted%3B internal stop;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=PUW38_01020;product=fimbrial adhesin StfH;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 239099 240378 . - . ID=gene-PUW38_01025;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=pseudogene;locus_tag=PUW38_01025;pseudo=true CP118116.1 Protein Homology CDS 239099 240378 . - 0 ID=cds-PUW38_01025;Parent=gene-PUW38_01025;Note=frameshifted;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=PUW38_01025;product=glutamate-1-semialdehyde 2%2C1-aminomutase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 240548 241969 . + . ID=gene-PUW38_01030;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=PUW38_01030 CP118116.1 Protein Homology CDS 240548 241969 . + 0 ID=cds-WJG81454.1;Parent=gene-PUW38_01030;Dbxref=NCBI_GP:WJG81454.1;Name=WJG81454.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=PUW38_01030;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WJG81454.1;transl_table=11 CP118116.1 Genbank gene 242051 242395 . + . ID=gene-PUW38_01035;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=PUW38_01035 CP118116.1 Protein Homology CDS 242051 242395 . + 0 ID=cds-WJG81455.1;Parent=gene-PUW38_01035;Dbxref=NCBI_GP:WJG81455.1;Name=WJG81455.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=PUW38_01035;product=iron-sulfur cluster insertion protein ErpA;protein_id=WJG81455.1;transl_table=11 CP118116.1 Genbank gene 242496 243119 . - . ID=gene-PUW38_01040;Name=PUW38_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01040 CP118116.1 Protein Homology CDS 242496 243119 . - 0 ID=cds-WJG81456.1;Parent=gene-PUW38_01040;Dbxref=NCBI_GP:WJG81456.1;Name=WJG81456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=PUW38_01040;product=TRIC cation channel family protein;protein_id=WJG81456.1;transl_table=11 CP118116.1 Genbank gene 243156 243956 . - . ID=gene-PUW38_01045;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=PUW38_01045 CP118116.1 Protein Homology CDS 243156 243956 . - 0 ID=cds-WJG81457.1;Parent=gene-PUW38_01045;Dbxref=NCBI_GP:WJG81457.1;Name=WJG81457.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=PUW38_01045;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WJG81457.1;transl_table=11 CP118116.1 Genbank gene 243949 244647 . - . ID=gene-PUW38_01050;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=PUW38_01050 CP118116.1 Protein Homology CDS 243949 244647 . - 0 ID=cds-WJG81458.1;Parent=gene-PUW38_01050;Dbxref=NCBI_GP:WJG81458.1;Name=WJG81458.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=PUW38_01050;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WJG81458.1;transl_table=11 CP118116.1 Genbank gene 244732 246249 . + . ID=gene-PUW38_01055;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=PUW38_01055 CP118116.1 Protein Homology CDS 244732 246249 . + 0 ID=cds-WJG81459.1;Parent=gene-PUW38_01055;Dbxref=NCBI_GP:WJG81459.1;Name=WJG81459.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=PUW38_01055;product=dGTPase;protein_id=WJG81459.1;transl_table=11 CP118116.1 Genbank gene 246379 247806 . + . ID=gene-PUW38_01060;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=PUW38_01060 CP118116.1 Protein Homology CDS 246379 247806 . + 0 ID=cds-WJG81460.1;Parent=gene-PUW38_01060;Dbxref=NCBI_GP:WJG81460.1;Name=WJG81460.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=PUW38_01060;product=serine endoprotease DegP;protein_id=WJG81460.1;transl_table=11 CP118116.1 Genbank gene 247959 249116 . + . ID=gene-PUW38_01065;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=PUW38_01065 CP118116.1 Protein Homology CDS 247959 249116 . + 0 ID=cds-WJG81461.1;Parent=gene-PUW38_01065;Dbxref=NCBI_GP:WJG81461.1;Name=WJG81461.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=PUW38_01065;product=DNA-binding transcriptional regulator CdaR;protein_id=WJG81461.1;transl_table=11 CP118116.1 Genbank gene 249205 249591 . - . ID=gene-PUW38_01070;Name=PUW38_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01070 CP118116.1 Protein Homology CDS 249205 249591 . - 0 ID=cds-WJG81462.1;Parent=gene-PUW38_01070;Dbxref=NCBI_GP:WJG81462.1;Name=WJG81462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=PUW38_01070;product=DUF3461 family protein;protein_id=WJG81462.1;transl_table=11 CP118116.1 Genbank gene 249838 251139 . + . ID=gene-PUW38_01075;Name=PUW38_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01075 CP118116.1 Protein Homology CDS 249838 251139 . + 0 ID=cds-WJG81463.1;Parent=gene-PUW38_01075;Dbxref=NCBI_GP:WJG81463.1;Name=WJG81463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=PUW38_01075;product=MFS transporter;protein_id=WJG81463.1;transl_table=11 CP118116.1 Genbank gene 251176 252000 . - . ID=gene-PUW38_01080;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=PUW38_01080 CP118116.1 Protein Homology CDS 251176 252000 . - 0 ID=cds-WJG81464.1;Parent=gene-PUW38_01080;Dbxref=NCBI_GP:WJG81464.1;Name=WJG81464.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=PUW38_01080;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WJG81464.1;transl_table=11 CP118116.1 Genbank gene 252030 254702 . - . ID=gene-PUW38_01085;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=PUW38_01085 CP118116.1 Protein Homology CDS 252030 254702 . - 0 ID=cds-WJG81465.1;Parent=gene-PUW38_01085;Dbxref=NCBI_GP:WJG81465.1;Name=WJG81465.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=PUW38_01085;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WJG81465.1;transl_table=11 CP118116.1 Genbank gene 254940 255734 . - . ID=gene-PUW38_01090;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=PUW38_01090 CP118116.1 Protein Homology CDS 254940 255734 . - 0 ID=cds-WJG81466.1;Parent=gene-PUW38_01090;Dbxref=NCBI_GP:WJG81466.1;Name=WJG81466.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=PUW38_01090;product=type I methionyl aminopeptidase;protein_id=WJG81466.1;transl_table=11 CP118116.1 Genbank gene 256185 256910 . + . ID=gene-PUW38_01095;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=PUW38_01095 CP118116.1 Protein Homology CDS 256185 256910 . + 0 ID=cds-WJG81467.1;Parent=gene-PUW38_01095;Dbxref=NCBI_GP:WJG81467.1;Name=WJG81467.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=PUW38_01095;product=30S ribosomal protein S2;protein_id=WJG81467.1;transl_table=11 CP118116.1 Genbank gene 257168 258019 . + . ID=gene-PUW38_01100;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=PUW38_01100 CP118116.1 Protein Homology CDS 257168 258019 . + 0 ID=cds-WJG81468.1;Parent=gene-PUW38_01100;Dbxref=NCBI_GP:WJG81468.1;Name=WJG81468.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=PUW38_01100;product=translation elongation factor Ts;protein_id=WJG81468.1;transl_table=11 CP118116.1 Genbank gene 258164 258889 . + . ID=gene-PUW38_01105;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=PUW38_01105 CP118116.1 Protein Homology CDS 258164 258889 . + 0 ID=cds-WJG81469.1;Parent=gene-PUW38_01105;Dbxref=NCBI_GP:WJG81469.1;Name=WJG81469.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=PUW38_01105;product=UMP kinase;protein_id=WJG81469.1;transl_table=11 CP118116.1 Genbank gene 259036 259593 . + . ID=gene-PUW38_01110;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=PUW38_01110 CP118116.1 Protein Homology CDS 259036 259593 . + 0 ID=cds-WJG81470.1;Parent=gene-PUW38_01110;Dbxref=NCBI_GP:WJG81470.1;Name=WJG81470.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=PUW38_01110;product=ribosome recycling factor;protein_id=WJG81470.1;transl_table=11 CP118116.1 Genbank gene 259735 260931 . + . ID=gene-PUW38_01115;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=PUW38_01115 CP118116.1 Protein Homology CDS 259735 260931 . + 0 ID=cds-WJG81471.1;Parent=gene-PUW38_01115;Dbxref=NCBI_GP:WJG81471.1;Name=WJG81471.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=PUW38_01115;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WJG81471.1;transl_table=11 CP118116.1 Genbank gene 261244 262002 . + . ID=gene-PUW38_01120;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=PUW38_01120 CP118116.1 Protein Homology CDS 261244 262002 . + 0 ID=cds-WJG81472.1;Parent=gene-PUW38_01120;Dbxref=NCBI_GP:WJG81472.1;Name=WJG81472.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=PUW38_01120;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WJG81472.1;transl_table=11 CP118116.1 Genbank gene 262015 262872 . + . ID=gene-PUW38_01125;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=PUW38_01125 CP118116.1 Protein Homology CDS 262015 262872 . + 0 ID=cds-WJG81473.1;Parent=gene-PUW38_01125;Dbxref=NCBI_GP:WJG81473.1;Name=WJG81473.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=PUW38_01125;product=phosphatidate cytidylyltransferase;protein_id=WJG81473.1;transl_table=11 CP118116.1 Genbank gene 262884 264236 . + . ID=gene-PUW38_01130;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=PUW38_01130 CP118116.1 Protein Homology CDS 262884 264236 . + 0 ID=cds-WJG81474.1;Parent=gene-PUW38_01130;Dbxref=NCBI_GP:WJG81474.1;Name=WJG81474.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=PUW38_01130;product=sigma E protease regulator RseP;protein_id=WJG81474.1;transl_table=11 CP118116.1 Genbank gene 264268 266700 . + . ID=gene-PUW38_01135;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=PUW38_01135 CP118116.1 Protein Homology CDS 264268 266700 . + 0 ID=cds-WJG81475.1;Parent=gene-PUW38_01135;Dbxref=NCBI_GP:WJG81475.1;Name=WJG81475.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=PUW38_01135;product=outer membrane protein assembly factor BamA;protein_id=WJG81475.1;transl_table=11 CP118116.1 Genbank gene 266823 267308 . + . ID=gene-PUW38_01140;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=PUW38_01140 CP118116.1 Protein Homology CDS 266823 267308 . + 0 ID=cds-WJG81476.1;Parent=gene-PUW38_01140;Dbxref=NCBI_GP:WJG81476.1;Name=WJG81476.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=PUW38_01140;product=molecular chaperone Skp;protein_id=WJG81476.1;transl_table=11 CP118116.1 Genbank gene 267312 268337 . + . ID=gene-PUW38_01145;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=PUW38_01145 CP118116.1 Protein Homology CDS 267312 268337 . + 0 ID=cds-WJG81477.1;Parent=gene-PUW38_01145;Dbxref=NCBI_GP:WJG81477.1;Name=WJG81477.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=PUW38_01145;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WJG81477.1;transl_table=11 CP118116.1 Genbank gene 268443 268898 . + . ID=gene-PUW38_01150;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=PUW38_01150 CP118116.1 Protein Homology CDS 268443 268898 . + 0 ID=cds-WJG81478.1;Parent=gene-PUW38_01150;Dbxref=NCBI_GP:WJG81478.1;Name=WJG81478.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=PUW38_01150;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WJG81478.1;transl_table=11 CP118116.1 Genbank gene 268902 269690 . + . ID=gene-PUW38_01155;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=PUW38_01155 CP118116.1 Protein Homology CDS 268902 269690 . + 0 ID=cds-WJG81479.1;Parent=gene-PUW38_01155;Dbxref=NCBI_GP:WJG81479.1;Name=WJG81479.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=PUW38_01155;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WJG81479.1;transl_table=11 CP118116.1 Genbank gene 269690 270838 . + . ID=gene-PUW38_01160;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=PUW38_01160 CP118116.1 Protein Homology CDS 269690 270838 . + 0 ID=cds-WJG81480.1;Parent=gene-PUW38_01160;Dbxref=NCBI_GP:WJG81480.1;Name=WJG81480.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=PUW38_01160;product=lipid-A-disaccharide synthase;protein_id=WJG81480.1;transl_table=11 CP118116.1 Genbank gene 270835 271431 . + . ID=gene-PUW38_01165;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=PUW38_01165 CP118116.1 Protein Homology CDS 270835 271431 . + 0 ID=cds-WJG81481.1;Parent=gene-PUW38_01165;Dbxref=NCBI_GP:WJG81481.1;Name=WJG81481.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=PUW38_01165;product=ribonuclease HII;protein_id=WJG81481.1;transl_table=11 CP118116.1 Genbank gene 271455 274937 . + . ID=gene-PUW38_01170;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=PUW38_01170 CP118116.1 Protein Homology CDS 271455 274937 . + 0 ID=cds-WJG81482.1;Parent=gene-PUW38_01170;Dbxref=NCBI_GP:WJG81482.1;Name=WJG81482.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=PUW38_01170;product=DNA polymerase III subunit alpha;protein_id=WJG81482.1;transl_table=11 CP118116.1 Genbank gene 274950 275909 . + . ID=gene-PUW38_01175;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=PUW38_01175 CP118116.1 Protein Homology CDS 274950 275909 . + 0 ID=cds-WJG81483.1;Parent=gene-PUW38_01175;Dbxref=NCBI_GP:WJG81483.1;Name=WJG81483.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=PUW38_01175;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WJG81483.1;transl_table=11 CP118116.1 Genbank gene 276139 277854 . + . ID=gene-PUW38_01180;Name=PUW38_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01180 CP118116.1 Protein Homology CDS 276139 277854 . + 0 ID=cds-WJG83137.1;Parent=gene-PUW38_01180;Dbxref=NCBI_GP:WJG83137.1;Name=WJG83137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007718136.1;locus_tag=PUW38_01180;product=PKD domain-containing protein;protein_id=WJG83137.1;transl_table=11 CP118116.1 Genbank gene 277930 280071 . + . ID=gene-PUW38_01185;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=PUW38_01185 CP118116.1 Protein Homology CDS 277930 280071 . + 0 ID=cds-WJG81484.1;Parent=gene-PUW38_01185;Dbxref=NCBI_GP:WJG81484.1;Name=WJG81484.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=PUW38_01185;product=lysine decarboxylase LdcC;protein_id=WJG81484.1;transl_table=11 CP118116.1 Genbank gene 280127 280516 . + . ID=gene-PUW38_01190;Name=PUW38_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01190 CP118116.1 Protein Homology CDS 280127 280516 . + 0 ID=cds-WJG81485.1;Parent=gene-PUW38_01190;Dbxref=NCBI_GP:WJG81485.1;Name=WJG81485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=PUW38_01190;product=VOC family protein;protein_id=WJG81485.1;transl_table=11 CP118116.1 Genbank gene 280579 281871 . + . ID=gene-PUW38_01195;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=PUW38_01195 CP118116.1 Protein Homology CDS 280579 281871 . + 0 ID=cds-WJG81486.1;Parent=gene-PUW38_01195;Dbxref=NCBI_GP:WJG81486.1;Name=WJG81486.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=PUW38_01195;product=tRNA lysidine(34) synthetase TilS;protein_id=WJG81486.1;transl_table=11 CP118116.1 Genbank gene 281955 282215 . - . ID=gene-PUW38_01200;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=PUW38_01200 CP118116.1 Protein Homology CDS 281955 282215 . - 0 ID=cds-WJG81487.1;Parent=gene-PUW38_01200;Dbxref=NCBI_GP:WJG81487.1;Name=WJG81487.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=PUW38_01200;product=Rho-binding antiterminator;protein_id=WJG81487.1;transl_table=11 CP118116.1 Genbank gene 282202 282402 . - . ID=gene-PUW38_01205;Name=PUW38_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01205 CP118116.1 Protein Homology CDS 282202 282402 . - 0 ID=cds-WJG81488.1;Parent=gene-PUW38_01205;Dbxref=NCBI_GP:WJG81488.1;Name=WJG81488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=PUW38_01205;product=YaeP family protein;protein_id=WJG81488.1;transl_table=11 CP118116.1 Genbank gene 282600 283145 . + . ID=gene-PUW38_01210;Name=PUW38_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01210 CP118116.1 Protein Homology CDS 282600 283145 . + 0 ID=cds-WJG81489.1;Parent=gene-PUW38_01210;Dbxref=NCBI_GP:WJG81489.1;Name=WJG81489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=PUW38_01210;product=YaeQ family protein;protein_id=WJG81489.1;transl_table=11 CP118116.1 Genbank gene 283142 283564 . + . ID=gene-PUW38_01215;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=PUW38_01215 CP118116.1 Protein Homology CDS 283142 283564 . + 0 ID=cds-WJG81490.1;Parent=gene-PUW38_01215;Dbxref=NCBI_GP:WJG81490.1;Name=WJG81490.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=PUW38_01215;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WJG81490.1;transl_table=11 CP118116.1 Genbank gene 283596 284297 . + . ID=gene-PUW38_01220;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=PUW38_01220 CP118116.1 Protein Homology CDS 283596 284297 . + 0 ID=cds-WJG81491.1;Parent=gene-PUW38_01220;Dbxref=NCBI_GP:WJG81491.1;Name=WJG81491.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=PUW38_01220;product=envelope stress response activation lipoprotein NlpE;protein_id=WJG81491.1;transl_table=11 CP118116.1 Genbank gene 284371 286089 . - . ID=gene-PUW38_01225;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=PUW38_01225 CP118116.1 Protein Homology CDS 284371 286089 . - 0 ID=cds-WJG81492.1;Parent=gene-PUW38_01225;Dbxref=NCBI_GP:WJG81492.1;Name=WJG81492.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=PUW38_01225;product=proline--tRNA ligase;protein_id=WJG81492.1;transl_table=11 CP118116.1 Genbank gene 286200 286907 . - . ID=gene-PUW38_01230;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=PUW38_01230 CP118116.1 Protein Homology CDS 286200 286907 . - 0 ID=cds-WJG81493.1;Parent=gene-PUW38_01230;Dbxref=NCBI_GP:WJG81493.1;Name=WJG81493.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=PUW38_01230;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WJG81493.1;transl_table=11 CP118116.1 Genbank gene 286904 287308 . - . ID=gene-PUW38_01235;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=PUW38_01235 CP118116.1 Protein Homology CDS 286904 287308 . - 0 ID=cds-WJG81494.1;Parent=gene-PUW38_01235;Dbxref=NCBI_GP:WJG81494.1;Name=WJG81494.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=PUW38_01235;product=Rcs stress response system protein RcsF;protein_id=WJG81494.1;transl_table=11 CP118116.1 Genbank gene 287427 288242 . - . ID=gene-PUW38_01240;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=PUW38_01240 CP118116.1 Protein Homology CDS 287427 288242 . - 0 ID=cds-WJG81495.1;Parent=gene-PUW38_01240;Dbxref=NCBI_GP:WJG81495.1;Name=WJG81495.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=PUW38_01240;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WJG81495.1;transl_table=11 CP118116.1 Genbank gene 288281 288934 . - . ID=gene-PUW38_01245;Name=PUW38_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01245 CP118116.1 Protein Homology CDS 288281 288934 . - 0 ID=cds-WJG81496.1;Parent=gene-PUW38_01245;Dbxref=NCBI_GP:WJG81496.1;Name=WJG81496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=PUW38_01245;product=methionine ABC transporter permease MetI;protein_id=WJG81496.1;transl_table=11 CP118116.1 Genbank gene 288927 289958 . - . ID=gene-PUW38_01250;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=PUW38_01250 CP118116.1 Protein Homology CDS 288927 289958 . - 0 ID=cds-WJG81497.1;Parent=gene-PUW38_01250;Dbxref=NCBI_GP:WJG81497.1;Name=WJG81497.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=PUW38_01250;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WJG81497.1;transl_table=11 CP118116.1 Genbank gene 290148 290714 . + . ID=gene-PUW38_01255;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=PUW38_01255 CP118116.1 Protein Homology CDS 290148 290714 . + 0 ID=cds-WJG81498.1;Parent=gene-PUW38_01255;Dbxref=NCBI_GP:WJG81498.1;Name=WJG81498.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=PUW38_01255;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WJG81498.1;transl_table=11 CP118116.1 Genbank gene 291082 292623 . + . ID=gene-PUW38_01260;Name=PUW38_01260;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_01260 CP118116.1 cmsearch rRNA 291082 292623 . + . ID=rna-PUW38_01260;Parent=gene-PUW38_01260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_01260;product=16S ribosomal RNA CP118116.1 cmsearch exon 291082 292623 . + . ID=exon-PUW38_01260-1;Parent=rna-PUW38_01260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_01260;product=16S ribosomal RNA CP118116.1 Genbank gene 292693 292769 . + . ID=gene-PUW38_01265;Name=PUW38_01265;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_01265 CP118116.1 tRNAscan-SE tRNA 292693 292769 . + . ID=rna-PUW38_01265;Parent=gene-PUW38_01265;anticodon=(pos:292727..292729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01265;product=tRNA-Ile CP118116.1 tRNAscan-SE exon 292693 292769 . + . ID=exon-PUW38_01265-1;Parent=rna-PUW38_01265;anticodon=(pos:292727..292729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01265;product=tRNA-Ile CP118116.1 Genbank gene 292881 292956 . + . ID=gene-PUW38_01270;Name=PUW38_01270;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_01270 CP118116.1 tRNAscan-SE tRNA 292881 292956 . + . ID=rna-PUW38_01270;Parent=gene-PUW38_01270;anticodon=(pos:292914..292916);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01270;product=tRNA-Ala CP118116.1 tRNAscan-SE exon 292881 292956 . + . ID=exon-PUW38_01270-1;Parent=rna-PUW38_01270;anticodon=(pos:292914..292916);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01270;product=tRNA-Ala CP118116.1 Genbank gene 293139 296127 . + . ID=gene-PUW38_01275;Name=PUW38_01275;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_01275 CP118116.1 cmsearch rRNA 293139 296127 . + . ID=rna-PUW38_01275;Parent=gene-PUW38_01275;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_01275;product=23S ribosomal RNA CP118116.1 cmsearch exon 293139 296127 . + . ID=exon-PUW38_01275-1;Parent=rna-PUW38_01275;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_01275;product=23S ribosomal RNA CP118116.1 Genbank gene 296324 296439 . + . ID=gene-PUW38_01280;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW38_01280 CP118116.1 cmsearch rRNA 296324 296439 . + . ID=rna-PUW38_01280;Parent=gene-PUW38_01280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_01280;product=5S ribosomal RNA CP118116.1 cmsearch exon 296324 296439 . + . ID=exon-PUW38_01280-1;Parent=rna-PUW38_01280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_01280;product=5S ribosomal RNA CP118116.1 Genbank gene 296631 296707 . + . ID=gene-PUW38_01285;Name=PUW38_01285;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_01285 CP118116.1 tRNAscan-SE tRNA 296631 296707 . + . ID=rna-PUW38_01285;Parent=gene-PUW38_01285;anticodon=(pos:296665..296667);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01285;product=tRNA-Asp CP118116.1 tRNAscan-SE exon 296631 296707 . + . ID=exon-PUW38_01285-1;Parent=rna-PUW38_01285;anticodon=(pos:296665..296667);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01285;product=tRNA-Asp CP118116.1 Genbank gene 296872 297675 . + . ID=gene-PUW38_01290;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=PUW38_01290 CP118116.1 Protein Homology CDS 296872 297675 . + 0 ID=cds-WJG81499.1;Parent=gene-PUW38_01290;Dbxref=NCBI_GP:WJG81499.1;Name=WJG81499.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=PUW38_01290;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WJG81499.1;transl_table=11 CP118116.1 Genbank gene 297696 298610 . - . ID=gene-PUW38_01295;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=PUW38_01295 CP118116.1 Protein Homology CDS 297696 298610 . - 0 ID=cds-WJG81500.1;Parent=gene-PUW38_01295;Dbxref=NCBI_GP:WJG81500.1;Name=WJG81500.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=PUW38_01295;product=DNA-binding transcriptional regulator YafC;protein_id=WJG81500.1;transl_table=11 CP118116.1 Genbank pseudogene 298715 299889 . + . ID=gene-PUW38_01300;Name=PUW38_01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01300;pseudo=true CP118116.1 Protein Homology CDS 298715 299889 . + 0 ID=cds-PUW38_01300;Parent=gene-PUW38_01300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=PUW38_01300;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 300020 300820 . + . ID=gene-PUW38_01305;Name=PUW38_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01305 CP118116.1 Protein Homology CDS 300020 300820 . + 0 ID=cds-WJG81501.1;Parent=gene-PUW38_01305;Dbxref=NCBI_GP:WJG81501.1;Name=WJG81501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=PUW38_01305;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WJG81501.1;transl_table=11 CP118116.1 Genbank gene 300898 301668 . + . ID=gene-PUW38_01310;Name=PUW38_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01310 CP118116.1 Protein Homology CDS 300898 301668 . + 0 ID=cds-WJG81502.1;Parent=gene-PUW38_01310;Dbxref=NCBI_GP:WJG81502.1;Name=WJG81502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=PUW38_01310;product=class I SAM-dependent methyltransferase;protein_id=WJG81502.1;transl_table=11 CP118116.1 Genbank gene 301724 303091 . - . ID=gene-PUW38_01315;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=PUW38_01315 CP118116.1 Protein Homology CDS 301724 303091 . - 0 ID=cds-WJG81503.1;Parent=gene-PUW38_01315;Dbxref=NCBI_GP:WJG81503.1;Name=WJG81503.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=PUW38_01315;product=murein transglycosylase D;protein_id=WJG81503.1;transl_table=11 CP118116.1 Genbank gene 303163 303918 . - . ID=gene-PUW38_01320;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=PUW38_01320 CP118116.1 Protein Homology CDS 303163 303918 . - 0 ID=cds-WJG81504.1;Parent=gene-PUW38_01320;Dbxref=NCBI_GP:WJG81504.1;Name=WJG81504.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=PUW38_01320;product=hydroxyacylglutathione hydrolase;protein_id=WJG81504.1;transl_table=11 CP118116.1 Genbank gene 303953 304675 . + . ID=gene-PUW38_01325;Name=PUW38_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01325 CP118116.1 Protein Homology CDS 303953 304675 . + 0 ID=cds-WJG81505.1;Parent=gene-PUW38_01325;Dbxref=NCBI_GP:WJG81505.1;Name=WJG81505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=PUW38_01325;product=class I SAM-dependent methyltransferase;protein_id=WJG81505.1;transl_table=11 CP118116.1 Genbank gene 304672 305139 . - . ID=gene-PUW38_01330;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=PUW38_01330 CP118116.1 Protein Homology CDS 304672 305139 . - 0 ID=cds-WJG81506.1;Parent=gene-PUW38_01330;Dbxref=NCBI_GP:WJG81506.1;Name=WJG81506.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=PUW38_01330;product=ribonuclease HI;protein_id=WJG81506.1;transl_table=11 CP118116.1 Genbank gene 305203 305934 . + . ID=gene-PUW38_01335;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=PUW38_01335 CP118116.1 Protein Homology CDS 305203 305934 . + 0 ID=cds-WJG81507.1;Parent=gene-PUW38_01335;Dbxref=NCBI_GP:WJG81507.1;Name=WJG81507.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=PUW38_01335;product=DNA polymerase III subunit epsilon;protein_id=WJG81507.1;transl_table=11 CP118116.1 Genbank gene 306068 306144 . + . ID=gene-PUW38_01340;Name=PUW38_01340;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_01340 CP118116.1 tRNAscan-SE tRNA 306068 306144 . + . ID=rna-PUW38_01340;Parent=gene-PUW38_01340;anticodon=(pos:306102..306104);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01340;product=tRNA-Asp CP118116.1 tRNAscan-SE exon 306068 306144 . + . ID=exon-PUW38_01340-1;Parent=rna-PUW38_01340;anticodon=(pos:306102..306104);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01340;product=tRNA-Asp CP118116.1 Genbank gene 306284 307129 . - . ID=gene-PUW38_01345;Name=PUW38_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01345 CP118116.1 Protein Homology CDS 306284 307129 . - 0 ID=cds-WJG81508.1;Parent=gene-PUW38_01345;Dbxref=NCBI_GP:WJG81508.1;Name=WJG81508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289296.1;locus_tag=PUW38_01345;product=DUF4942 domain-containing protein;protein_id=WJG81508.1;transl_table=11 CP118116.1 Genbank gene 307207 307401 . - . ID=gene-PUW38_01350;Name=PUW38_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01350 CP118116.1 Protein Homology CDS 307207 307401 . - 0 ID=cds-WJG81509.1;Parent=gene-PUW38_01350;Dbxref=NCBI_GP:WJG81509.1;Name=WJG81509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750277.1;locus_tag=PUW38_01350;product=DUF957 domain-containing protein;protein_id=WJG81509.1;transl_table=11 CP118116.1 Genbank gene 307427 307918 . - . ID=gene-PUW38_01355;Name=PUW38_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01355 CP118116.1 Protein Homology CDS 307427 307918 . - 0 ID=cds-WJG81510.1;Parent=gene-PUW38_01355;Dbxref=NCBI_GP:WJG81510.1;Name=WJG81510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392970.1;locus_tag=PUW38_01355;product=DUF5983 family protein;protein_id=WJG81510.1;transl_table=11 CP118116.1 Genbank gene 307866 308291 . - . ID=gene-PUW38_01360;Name=PUW38_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01360 CP118116.1 Protein Homology CDS 307866 308291 . - 0 ID=cds-WJG81511.1;Parent=gene-PUW38_01360;Dbxref=NCBI_GP:WJG81511.1;Name=WJG81511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166552.1;locus_tag=PUW38_01360;product=TA system toxin CbtA family protein;protein_id=WJG81511.1;transl_table=11 CP118116.1 Genbank gene 308350 308994 . - . ID=gene-PUW38_01365;Name=PUW38_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01365 CP118116.1 Protein Homology CDS 308350 308994 . - 0 ID=cds-WJG81512.1;Parent=gene-PUW38_01365;Dbxref=NCBI_GP:WJG81512.1;Name=WJG81512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086751.1;locus_tag=PUW38_01365;product=antitoxin of toxin-antitoxin stability system;protein_id=WJG81512.1;transl_table=11 CP118116.1 Genbank gene 308991 309362 . - . ID=gene-PUW38_01370;Name=PUW38_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01370 CP118116.1 Protein Homology CDS 308991 309362 . - 0 ID=cds-WJG81513.1;Parent=gene-PUW38_01370;Dbxref=NCBI_GP:WJG81513.1;Name=WJG81513.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158818.1;locus_tag=PUW38_01370;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WJG81513.1;transl_table=11 CP118116.1 Genbank gene 309334 309702 . - . ID=gene-PUW38_01375;Name=PUW38_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01375 CP118116.1 Protein Homology CDS 309334 309702 . - 0 ID=cds-WJG81514.1;Parent=gene-PUW38_01375;Dbxref=NCBI_GP:WJG81514.1;Name=WJG81514.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282843.1;locus_tag=PUW38_01375;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WJG81514.1;transl_table=11 CP118116.1 Genbank gene 309720 309941 . - . ID=gene-PUW38_01380;Name=PUW38_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01380 CP118116.1 Protein Homology CDS 309720 309941 . - 0 ID=cds-WJG81515.1;Parent=gene-PUW38_01380;Dbxref=NCBI_GP:WJG81515.1;Name=WJG81515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588435.1;locus_tag=PUW38_01380;product=DUF987 family protein;protein_id=WJG81515.1;transl_table=11 CP118116.1 Genbank gene 309938 310228 . - . ID=gene-PUW38_01385;Name=PUW38_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01385 CP118116.1 Protein Homology CDS 309938 310228 . - 0 ID=cds-WJG81516.1;Parent=gene-PUW38_01385;Dbxref=NCBI_GP:WJG81516.1;Name=WJG81516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001243218.1;locus_tag=PUW38_01385;product=hypothetical protein;protein_id=WJG81516.1;transl_table=11 CP118116.1 Genbank gene 310244 310723 . - . ID=gene-PUW38_01390;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PUW38_01390 CP118116.1 Protein Homology CDS 310244 310723 . - 0 ID=cds-WJG81517.1;Parent=gene-PUW38_01390;Dbxref=NCBI_GP:WJG81517.1;Name=WJG81517.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004109365.1;locus_tag=PUW38_01390;product=DNA repair protein RadC;protein_id=WJG81517.1;transl_table=11 CP118116.1 Genbank gene 310734 311192 . - . ID=gene-PUW38_01395;Name=PUW38_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01395 CP118116.1 Protein Homology CDS 310734 311192 . - 0 ID=cds-WJG81518.1;Parent=gene-PUW38_01395;Dbxref=NCBI_GP:WJG81518.1;Name=WJG81518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783821.1;locus_tag=PUW38_01395;product=antirestriction protein;protein_id=WJG81518.1;transl_table=11 CP118116.1 Genbank gene 311274 311657 . - . ID=gene-PUW38_01400;Name=PUW38_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01400 CP118116.1 Protein Homology CDS 311274 311657 . - 0 ID=cds-WJG81519.1;Parent=gene-PUW38_01400;Dbxref=NCBI_GP:WJG81519.1;Name=WJG81519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522007.1;locus_tag=PUW38_01400;product=hypothetical protein;protein_id=WJG81519.1;transl_table=11 CP118116.1 Genbank gene 312063 312881 . - . ID=gene-PUW38_01405;Name=PUW38_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01405 CP118116.1 Protein Homology CDS 312063 312881 . - 0 ID=cds-WJG81520.1;Parent=gene-PUW38_01405;Dbxref=NCBI_GP:WJG81520.1;Name=WJG81520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234406.1;locus_tag=PUW38_01405;product=DUF932 domain-containing protein;protein_id=WJG81520.1;transl_table=11 CP118116.1 Genbank gene 312987 313226 . - . ID=gene-PUW38_01410;Name=PUW38_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01410 CP118116.1 Protein Homology CDS 312987 313226 . - 0 ID=cds-WJG83138.1;Parent=gene-PUW38_01410;Dbxref=NCBI_GP:WJG83138.1;Name=WJG83138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374428.1;locus_tag=PUW38_01410;product=DUF905 family protein;protein_id=WJG83138.1;transl_table=11 CP118116.1 Genbank gene 313332 313745 . - . ID=gene-PUW38_01415;Name=PUW38_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01415 CP118116.1 Protein Homology CDS 313332 313745 . - 0 ID=cds-WJG81521.1;Parent=gene-PUW38_01415;Dbxref=NCBI_GP:WJG81521.1;Name=WJG81521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789534.1;locus_tag=PUW38_01415;product=hypothetical protein;protein_id=WJG81521.1;transl_table=11 CP118116.1 Genbank gene 314019 314558 . - . ID=gene-PUW38_01420;Name=PUW38_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01420 CP118116.1 Protein Homology CDS 314019 314558 . - 0 ID=cds-WJG81522.1;Parent=gene-PUW38_01420;Dbxref=NCBI_GP:WJG81522.1;Name=WJG81522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104019.1;locus_tag=PUW38_01420;product=DUF4339 domain-containing protein;protein_id=WJG81522.1;transl_table=11 CP118116.1 Genbank gene 314621 315073 . - . ID=gene-PUW38_01425;Name=PUW38_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01425 CP118116.1 Protein Homology CDS 314621 315073 . - 0 ID=cds-WJG81523.1;Parent=gene-PUW38_01425;Dbxref=NCBI_GP:WJG81523.1;Name=WJG81523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245672.1;locus_tag=PUW38_01425;product=hypothetical protein;protein_id=WJG81523.1;transl_table=11 CP118116.1 Genbank gene 315070 315522 . - . ID=gene-PUW38_01430;Name=PUW38_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01430 CP118116.1 Protein Homology CDS 315070 315522 . - 0 ID=cds-WJG81524.1;Parent=gene-PUW38_01430;Dbxref=NCBI_GP:WJG81524.1;Name=WJG81524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683446.1;locus_tag=PUW38_01430;product=hypothetical protein;protein_id=WJG81524.1;transl_table=11 CP118116.1 Genbank gene 315559 316125 . - . ID=gene-PUW38_01435;Name=PUW38_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01435 CP118116.1 Protein Homology CDS 315559 316125 . - 0 ID=cds-WJG81525.1;Parent=gene-PUW38_01435;Dbxref=NCBI_GP:WJG81525.1;Name=WJG81525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765651.1;locus_tag=PUW38_01435;product=hypothetical protein;protein_id=WJG81525.1;transl_table=11 CP118116.1 Genbank gene 316122 316835 . - . ID=gene-PUW38_01440;Name=PUW38_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01440 CP118116.1 Protein Homology CDS 316122 316835 . - 0 ID=cds-WJG81526.1;Parent=gene-PUW38_01440;Dbxref=NCBI_GP:WJG81526.1;Name=WJG81526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075759.1;locus_tag=PUW38_01440;product=WYL domain-containing protein;protein_id=WJG81526.1;transl_table=11 CP118116.1 Genbank pseudogene 317096 317971 . - . ID=gene-PUW38_01445;Name=PUW38_01445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01445;pseudo=true CP118116.1 Protein Homology CDS 317096 317971 . - 0 ID=cds-PUW38_01445;Parent=gene-PUW38_01445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165430.1;locus_tag=PUW38_01445;product=GTPase family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 318509 318745 . + . ID=gene-PUW38_01450;Name=PUW38_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01450 CP118116.1 GeneMarkS-2+ CDS 318509 318745 . + 0 ID=cds-WJG81527.1;Parent=gene-PUW38_01450;Dbxref=NCBI_GP:WJG81527.1;Name=WJG81527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_01450;product=hypothetical protein;protein_id=WJG81527.1;transl_table=11 CP118116.1 Genbank gene 319318 320919 . + . ID=gene-PUW38_01455;Name=PUW38_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01455 CP118116.1 GeneMarkS-2+ CDS 319318 320919 . + 0 ID=cds-WJG83324.1;Parent=gene-PUW38_01455;Dbxref=NCBI_GP:WJG83324.1;Name=WJG83324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_01455;product=hypothetical protein;protein_id=WJG83324.1;transl_table=11 CP118116.1 Genbank gene 320907 321725 . + . ID=gene-PUW38_01460;Name=PUW38_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01460 CP118116.1 GeneMarkS-2+ CDS 320907 321725 . + 0 ID=cds-WJG81528.1;Parent=gene-PUW38_01460;Dbxref=NCBI_GP:WJG81528.1;Name=WJG81528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_01460;product=hypothetical protein;protein_id=WJG81528.1;transl_table=11 CP118116.1 Genbank gene 321833 322267 . + . ID=gene-PUW38_01465;Name=PUW38_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01465 CP118116.1 GeneMarkS-2+ CDS 321833 322267 . + 0 ID=cds-WJG81529.1;Parent=gene-PUW38_01465;Dbxref=NCBI_GP:WJG81529.1;Name=WJG81529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_01465;product=hypothetical protein;protein_id=WJG81529.1;transl_table=11 CP118116.1 Genbank pseudogene 322301 322606 . + . ID=gene-PUW38_01470;Name=PUW38_01470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01470;pseudo=true CP118116.1 Protein Homology CDS 322301 322606 . + 0 ID=cds-PUW38_01470;Parent=gene-PUW38_01470;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024486.2;locus_tag=PUW38_01470;product=AAA domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 322603 323163 . + . ID=gene-PUW38_01475;Name=PUW38_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01475 CP118116.1 Protein Homology CDS 322603 323163 . + 0 ID=cds-WJG81530.1;Parent=gene-PUW38_01475;Dbxref=NCBI_GP:WJG81530.1;Name=WJG81530.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024486.2;locus_tag=PUW38_01475;product=AAA domain-containing protein;protein_id=WJG81530.1;transl_table=11 CP118116.1 Genbank gene 323191 323991 . + . ID=gene-PUW38_01480;Name=PUW38_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01480 CP118116.1 Protein Homology CDS 323191 323991 . + 0 ID=cds-WJG81531.1;Parent=gene-PUW38_01480;Dbxref=NCBI_GP:WJG81531.1;Name=WJG81531.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024487.2;locus_tag=PUW38_01480;product=AAA domain-containing protein;protein_id=WJG81531.1;transl_table=11 CP118116.1 Genbank gene 323988 325511 . + . ID=gene-PUW38_01485;Name=PUW38_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01485 CP118116.1 Protein Homology CDS 323988 325511 . + 0 ID=cds-WJG81532.1;Parent=gene-PUW38_01485;Dbxref=NCBI_GP:WJG81532.1;Name=WJG81532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631139.1;locus_tag=PUW38_01485;product=hypothetical protein;protein_id=WJG81532.1;transl_table=11 CP118116.1 Genbank gene 325829 327679 . - . ID=gene-PUW38_01490;Name=PUW38_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01490 CP118116.1 Protein Homology CDS 325829 327679 . - 0 ID=cds-WJG81533.1;Parent=gene-PUW38_01490;Dbxref=NCBI_GP:WJG81533.1;Name=WJG81533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556732.1;locus_tag=PUW38_01490;product=hypothetical protein;protein_id=WJG81533.1;transl_table=11 CP118116.1 Genbank gene 327783 328007 . + . ID=gene-PUW38_01495;Name=PUW38_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01495 CP118116.1 Protein Homology CDS 327783 328007 . + 0 ID=cds-WJG81534.1;Parent=gene-PUW38_01495;Dbxref=NCBI_GP:WJG81534.1;Name=WJG81534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532213.1;locus_tag=PUW38_01495;product=AlpA family phage regulatory protein;protein_id=WJG81534.1;transl_table=11 CP118116.1 Genbank gene 328032 329552 . + . ID=gene-PUW38_01500;Name=PUW38_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01500 CP118116.1 Protein Homology CDS 328032 329552 . + 0 ID=cds-WJG81535.1;Parent=gene-PUW38_01500;Dbxref=NCBI_GP:WJG81535.1;Name=WJG81535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778659.1;locus_tag=PUW38_01500;product=YfjI family protein;protein_id=WJG81535.1;transl_table=11 CP118116.1 Genbank pseudogene 329946 330401 . + . ID=gene-PUW38_01505;Name=PUW38_01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01505;pseudo=true CP118116.1 Protein Homology CDS 329946 330401 . + 0 ID=cds-PUW38_01505;Parent=gene-PUW38_01505;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023154.2;locus_tag=PUW38_01505;product=inovirus Gp2 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 330437 331201 . - . ID=gene-PUW38_01510;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=PUW38_01510 CP118116.1 Protein Homology CDS 330437 331201 . - 0 ID=cds-WJG81536.1;Parent=gene-PUW38_01510;Dbxref=NCBI_GP:WJG81536.1;Name=WJG81536.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806695.1;locus_tag=PUW38_01510;product=type VI secretion system-associated protein TagK;protein_id=WJG81536.1;transl_table=11 CP118116.1 Genbank pseudogene 331568 334367 . + . ID=gene-PUW38_01515;Name=PUW38_01515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01515;pseudo=true CP118116.1 Protein Homology CDS 331568 334367 . + 0 ID=cds-PUW38_01515;Parent=gene-PUW38_01515;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449788.1;locus_tag=PUW38_01515;product=AAA family ATPase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 334333 334698 . + . ID=gene-PUW38_01520;Name=PUW38_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01520 CP118116.1 Protein Homology CDS 334333 334698 . + 0 ID=cds-WJG81537.1;Parent=gene-PUW38_01520;Dbxref=NCBI_GP:WJG81537.1;Name=WJG81537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231281.1;locus_tag=PUW38_01520;product=hypothetical protein;protein_id=WJG81537.1;transl_table=11 CP118116.1 Genbank gene 335476 335796 . + . ID=gene-PUW38_01525;Name=PUW38_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01525 CP118116.1 Protein Homology CDS 335476 335796 . + 0 ID=cds-WJG81538.1;Parent=gene-PUW38_01525;Dbxref=NCBI_GP:WJG81538.1;Name=WJG81538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575643.1;locus_tag=PUW38_01525;product=Imm8 family immunity protein;protein_id=WJG81538.1;transl_table=11 CP118116.1 Genbank gene 335879 336013 . - . ID=gene-PUW38_01530;Name=PUW38_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01530 CP118116.1 Protein Homology CDS 335879 336013 . - 0 ID=cds-WJG81539.1;Parent=gene-PUW38_01530;Dbxref=NCBI_GP:WJG81539.1;Name=WJG81539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675090.1;locus_tag=PUW38_01530;product=hypothetical protein;protein_id=WJG81539.1;transl_table=11 CP118116.1 Genbank gene 336252 336368 . + . ID=gene-PUW38_01535;Name=PUW38_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01535 CP118116.1 Protein Homology CDS 336252 336368 . + 0 ID=cds-WJG81540.1;Parent=gene-PUW38_01535;Dbxref=NCBI_GP:WJG81540.1;Name=WJG81540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=PUW38_01535;product=hypothetical protein;protein_id=WJG81540.1;transl_table=11 CP118116.1 Genbank gene 336458 336691 . + . ID=gene-PUW38_01540;Name=PUW38_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01540 CP118116.1 GeneMarkS-2+ CDS 336458 336691 . + 0 ID=cds-WJG81541.1;Parent=gene-PUW38_01540;Dbxref=NCBI_GP:WJG81541.1;Name=WJG81541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_01540;product=hypothetical protein;protein_id=WJG81541.1;transl_table=11 CP118116.1 Genbank gene 337562 337960 . + . ID=gene-PUW38_01545;Name=PUW38_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01545 CP118116.1 Protein Homology CDS 337562 337960 . + 0 ID=cds-WJG81542.1;Parent=gene-PUW38_01545;Dbxref=NCBI_GP:WJG81542.1;Name=WJG81542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828181.1;locus_tag=PUW38_01545;product=sugar tyrosine-protein kinase;protein_id=WJG81542.1;transl_table=11 CP118116.1 Genbank gene 338346 338624 . + . ID=gene-PUW38_01550;Name=PUW38_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01550 CP118116.1 Protein Homology CDS 338346 338624 . + 0 ID=cds-WJG83139.1;Parent=gene-PUW38_01550;Dbxref=NCBI_GP:WJG83139.1;Name=WJG83139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=PUW38_01550;product=hypothetical protein;protein_id=WJG83139.1;transl_table=11 CP118116.1 Genbank gene 338756 339004 . - . ID=gene-PUW38_01555;Name=PUW38_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01555 CP118116.1 Protein Homology CDS 338756 339004 . - 0 ID=cds-WJG81543.1;Parent=gene-PUW38_01555;Dbxref=NCBI_GP:WJG81543.1;Name=WJG81543.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446753.1;locus_tag=PUW38_01555;product=SymE family type I addiction module toxin;protein_id=WJG81543.1;transl_table=11 CP118116.1 Genbank pseudogene 339057 339761 . + . ID=gene-PUW38_01560;Name=PUW38_01560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01560;pseudo=true CP118116.1 Protein Homology CDS 339057 339761 . + 0 ID=cds-PUW38_01560;Parent=gene-PUW38_01560;Note=frameshifted;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=PUW38_01560;product=integrase core domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 340383 340880 . + . ID=gene-PUW38_01565;Name=PUW38_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01565 CP118116.1 Protein Homology CDS 340383 340880 . + 0 ID=cds-WJG81544.1;Parent=gene-PUW38_01565;Dbxref=NCBI_GP:WJG81544.1;Name=WJG81544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789627.1;locus_tag=PUW38_01565;product=Saf-pilin pilus formation protein SafA;protein_id=WJG81544.1;transl_table=11 CP118116.1 Genbank gene 340955 341695 . + . ID=gene-PUW38_01570;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=PUW38_01570 CP118116.1 Protein Homology CDS 340955 341695 . + 0 ID=cds-WJG81545.1;Parent=gene-PUW38_01570;Dbxref=NCBI_GP:WJG81545.1;Name=WJG81545.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=PUW38_01570;product=pili assembly chaperone SafB;protein_id=WJG81545.1;transl_table=11 CP118116.1 Genbank pseudogene 341719 344200 . + . ID=gene-PUW38_01575;Name=PUW38_01575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01575;pseudo=true CP118116.1 Protein Homology CDS 341719 344200 . + 0 ID=cds-PUW38_01575;Parent=gene-PUW38_01575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=PUW38_01575;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 344222 344692 . + . ID=gene-PUW38_01580;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=PUW38_01580 CP118116.1 Protein Homology CDS 344222 344692 . + 0 ID=cds-WJG81546.1;Parent=gene-PUW38_01580;Dbxref=NCBI_GP:WJG81546.1;Name=WJG81546.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=PUW38_01580;product=AfaD family invasin;protein_id=WJG81546.1;transl_table=11 CP118116.1 Genbank gene 345100 345921 . + . ID=gene-PUW38_01585;Name=PUW38_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01585 CP118116.1 Protein Homology CDS 345100 345921 . + 0 ID=cds-WJG81547.1;Parent=gene-PUW38_01585;Dbxref=NCBI_GP:WJG81547.1;Name=WJG81547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=PUW38_01585;product=polysaccharide deacetylase family protein;protein_id=WJG81547.1;transl_table=11 CP118116.1 Genbank pseudogene 346004 346244 . + . ID=gene-PUW38_01590;Name=PUW38_01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01590;pseudo=true CP118116.1 Protein Homology CDS 346004 346244 . + 0 ID=cds-PUW38_01590;Parent=gene-PUW38_01590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=PUW38_01590;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 346738 347679 . + . ID=gene-PUW38_01595;Name=PUW38_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01595 CP118116.1 Protein Homology CDS 346738 347679 . + 0 ID=cds-WJG81548.1;Parent=gene-PUW38_01595;Dbxref=NCBI_GP:WJG81548.1;Name=WJG81548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=PUW38_01595;product=LysR family transcriptional regulator;protein_id=WJG81548.1;transl_table=11 CP118116.1 Genbank gene 347796 348011 . + . ID=gene-PUW38_01600;Name=PUW38_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01600 CP118116.1 Protein Homology CDS 347796 348011 . + 0 ID=cds-WJG81549.1;Parent=gene-PUW38_01600;Dbxref=NCBI_GP:WJG81549.1;Name=WJG81549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=PUW38_01600;product=hypothetical protein;protein_id=WJG81549.1;transl_table=11 CP118116.1 Genbank gene 348015 348734 . - . ID=gene-PUW38_01605;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=PUW38_01605 CP118116.1 Protein Homology CDS 348015 348734 . - 0 ID=cds-WJG81550.1;Parent=gene-PUW38_01605;Dbxref=NCBI_GP:WJG81550.1;Name=WJG81550.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=PUW38_01605;product=adhesin/invasin protein PagN;protein_id=WJG81550.1;transl_table=11 CP118116.1 Genbank gene 349065 349472 . - . ID=gene-PUW38_01610;Name=PUW38_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01610 CP118116.1 Protein Homology CDS 349065 349472 . - 0 ID=cds-WJG81551.1;Parent=gene-PUW38_01610;Dbxref=NCBI_GP:WJG81551.1;Name=WJG81551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=PUW38_01610;product=Spy/CpxP family protein refolding chaperone;protein_id=WJG81551.1;transl_table=11 CP118116.1 Genbank gene 349843 350610 . - . ID=gene-PUW38_01615;Name=PUW38_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01615 CP118116.1 Protein Homology CDS 349843 350610 . - 0 ID=cds-WJG81552.1;Parent=gene-PUW38_01615;Dbxref=NCBI_GP:WJG81552.1;Name=WJG81552.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=PUW38_01615;product=amidohydrolase;protein_id=WJG81552.1;transl_table=11 CP118116.1 Genbank gene 350719 353163 . - . ID=gene-PUW38_01620;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=PUW38_01620 CP118116.1 Protein Homology CDS 350719 353163 . - 0 ID=cds-WJG81553.1;Parent=gene-PUW38_01620;Dbxref=NCBI_GP:WJG81553.1;Name=WJG81553.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=PUW38_01620;product=acyl-CoA dehydrogenase FadE;protein_id=WJG81553.1;transl_table=11 CP118116.1 Genbank gene 353403 353981 . + . ID=gene-PUW38_01625;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=PUW38_01625 CP118116.1 Protein Homology CDS 353403 353981 . + 0 ID=cds-WJG81554.1;Parent=gene-PUW38_01625;Dbxref=NCBI_GP:WJG81554.1;Name=WJG81554.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=PUW38_01625;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WJG81554.1;transl_table=11 CP118116.1 Genbank pseudogene 354194 354960 . + . ID=gene-PUW38_01630;Name=PUW38_01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01630;pseudo=true CP118116.1 Protein Homology CDS 354194 354960 . + 0 ID=cds-PUW38_01630;Parent=gene-PUW38_01630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=PUW38_01630;product=class II glutamine amidotransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 354931 355671 . - . ID=gene-PUW38_01635;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=PUW38_01635 CP118116.1 Protein Homology CDS 354931 355671 . - 0 ID=cds-WJG81555.1;Parent=gene-PUW38_01635;Dbxref=NCBI_GP:WJG81555.1;Name=WJG81555.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=PUW38_01635;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WJG81555.1;transl_table=11 CP118116.1 Genbank gene 355921 356976 . + . ID=gene-PUW38_01640;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=PUW38_01640 CP118116.1 Protein Homology CDS 355921 356976 . + 0 ID=cds-WJG81556.1;Parent=gene-PUW38_01640;Dbxref=NCBI_GP:WJG81556.1;Name=WJG81556.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=PUW38_01640;product=DNA polymerase IV;protein_id=WJG81556.1;transl_table=11 CP118116.1 Genbank gene 357195 358334 . + . ID=gene-PUW38_01645;Name=PUW38_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01645 CP118116.1 Protein Homology CDS 357195 358334 . + 0 ID=cds-WJG81557.1;Parent=gene-PUW38_01645;Dbxref=NCBI_GP:WJG81557.1;Name=WJG81557.1;Ontology_term=GO:0006415,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=PUW38_01645;product=RNA ligase RtcB family protein;protein_id=WJG81557.1;transl_table=11 CP118116.1 Genbank gene 358331 358945 . + . ID=gene-PUW38_01650;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=PUW38_01650 CP118116.1 Protein Homology CDS 358331 358945 . + 0 ID=cds-WJG81558.1;Parent=gene-PUW38_01650;Dbxref=NCBI_GP:WJG81558.1;Name=WJG81558.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=PUW38_01650;product=peptide chain release factor H;protein_id=WJG81558.1;transl_table=11 CP118116.1 Genbank gene 359100 360557 . - . ID=gene-PUW38_01655;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=PUW38_01655 CP118116.1 Protein Homology CDS 359100 360557 . - 0 ID=cds-WJG81559.1;Parent=gene-PUW38_01655;Dbxref=NCBI_GP:WJG81559.1;Name=WJG81559.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=PUW38_01655;product=cytosol nonspecific dipeptidase;protein_id=WJG81559.1;transl_table=11 CP118116.1 Genbank gene 360806 361264 . + . ID=gene-PUW38_01660;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=PUW38_01660 CP118116.1 Protein Homology CDS 360806 361264 . + 0 ID=cds-WJG81560.1;Parent=gene-PUW38_01660;Dbxref=NCBI_GP:WJG81560.1;Name=WJG81560.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=PUW38_01660;product=xanthine phosphoribosyltransferase;protein_id=WJG81560.1;transl_table=11 CP118116.1 Genbank gene 361353 362597 . + . ID=gene-PUW38_01665;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=PUW38_01665 CP118116.1 Protein Homology CDS 361353 362597 . + 0 ID=cds-WJG81561.1;Parent=gene-PUW38_01665;Dbxref=NCBI_GP:WJG81561.1;Name=WJG81561.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=PUW38_01665;product=esterase FrsA;protein_id=WJG81561.1;transl_table=11 CP118116.1 Genbank gene 362655 363056 . + . ID=gene-PUW38_01670;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=PUW38_01670 CP118116.1 Protein Homology CDS 362655 363056 . + 0 ID=cds-WJG81562.1;Parent=gene-PUW38_01670;Dbxref=NCBI_GP:WJG81562.1;Name=WJG81562.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=PUW38_01670;product=sigma factor-binding protein Crl;protein_id=WJG81562.1;transl_table=11 CP118116.1 Genbank pseudogene 363107 364159 . - . ID=gene-PUW38_01675;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=pseudogene;locus_tag=PUW38_01675;pseudo=true CP118116.1 Protein Homology CDS 363107 364159 . - 0 ID=cds-PUW38_01675;Parent=gene-PUW38_01675;Note=internal stop;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=PUW38_01675;product=phosphoporin PhoE;pseudo=true;transl_table=11 CP118116.1 Genbank gene 364442 365545 . + . ID=gene-PUW38_01680;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=PUW38_01680 CP118116.1 Protein Homology CDS 364442 365545 . + 0 ID=cds-WJG81563.1;Parent=gene-PUW38_01680;Dbxref=NCBI_GP:WJG81563.1;Name=WJG81563.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=PUW38_01680;product=glutamate 5-kinase;protein_id=WJG81563.1;transl_table=11 CP118116.1 Genbank gene 365557 366804 . + . ID=gene-PUW38_01685;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=PUW38_01685 CP118116.1 Protein Homology CDS 365557 366804 . + 0 ID=cds-WJG81564.1;Parent=gene-PUW38_01685;Dbxref=NCBI_GP:WJG81564.1;Name=WJG81564.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=PUW38_01685;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WJG81564.1;transl_table=11 CP118116.1 Genbank gene 366920 366995 . + . ID=gene-PUW38_01690;Name=PUW38_01690;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_01690 CP118116.1 tRNAscan-SE tRNA 366920 366995 . + . ID=rna-PUW38_01690;Parent=gene-PUW38_01690;anticodon=(pos:366953..366955);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01690;product=tRNA-Thr CP118116.1 tRNAscan-SE exon 366920 366995 . + . ID=exon-PUW38_01690-1;Parent=rna-PUW38_01690;anticodon=(pos:366953..366955);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_01690;product=tRNA-Thr CP118116.1 Genbank pseudogene 367159 367365 . + . ID=gene-PUW38_01695;Name=PUW38_01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01695;pseudo=true CP118116.1 Protein Homology CDS 367159 367365 . + 0 ID=cds-PUW38_01695;Parent=gene-PUW38_01695;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=PUW38_01695;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 367360 368066 . - . ID=gene-PUW38_01700;Name=PUW38_01700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01700;pseudo=true CP118116.1 Protein Homology CDS 367360 368066 . - 0 ID=cds-PUW38_01700;Parent=gene-PUW38_01700;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW38_01700;product=IS3 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 368133 368477 . + . ID=gene-PUW38_01705;Name=PUW38_01705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01705;pseudo=true CP118116.1 Protein Homology CDS 368133 368477 . + 0 ID=cds-PUW38_01705;Parent=gene-PUW38_01705;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=PUW38_01705;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 368467 368574 . + . ID=gene-PUW38_01710;Name=PUW38_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01710 CP118116.1 Protein Homology CDS 368467 368574 . + 0 ID=cds-WJG83140.1;Parent=gene-PUW38_01710;Dbxref=NCBI_GP:WJG83140.1;Name=WJG83140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.2;locus_tag=PUW38_01710;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=WJG83140.1;transl_table=11 CP118116.1 Genbank gene 368684 369007 . + . ID=gene-PUW38_01715;Name=PUW38_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01715 CP118116.1 Protein Homology CDS 368684 369007 . + 0 ID=cds-WJG81565.1;Parent=gene-PUW38_01715;Dbxref=NCBI_GP:WJG81565.1;Name=WJG81565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=PUW38_01715;product=DUF1889 family protein;protein_id=WJG81565.1;transl_table=11 CP118116.1 Genbank gene 369349 370587 . + . ID=gene-PUW38_01720;Name=PUW38_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01720 CP118116.1 Protein Homology CDS 369349 370587 . + 0 ID=cds-WJG83141.1;Parent=gene-PUW38_01720;Dbxref=NCBI_GP:WJG83141.1;Name=WJG83141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=PUW38_01720;product=MFS transporter;protein_id=WJG83141.1;transl_table=11 CP118116.1 Genbank gene 370718 372139 . + . ID=gene-PUW38_01725;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PUW38_01725 CP118116.1 Protein Homology CDS 370718 372139 . + 0 ID=cds-WJG81566.1;Parent=gene-PUW38_01725;Dbxref=NCBI_GP:WJG81566.1;Name=WJG81566.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=PUW38_01725;product=3-isopropylmalate dehydratase large subunit;protein_id=WJG81566.1;transl_table=11 CP118116.1 Genbank gene 372141 372767 . + . ID=gene-PUW38_01730;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PUW38_01730 CP118116.1 Protein Homology CDS 372141 372767 . + 0 ID=cds-WJG81567.1;Parent=gene-PUW38_01730;Dbxref=NCBI_GP:WJG81567.1;Name=WJG81567.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=PUW38_01730;product=3-isopropylmalate dehydratase small subunit;protein_id=WJG81567.1;transl_table=11 CP118116.1 Genbank gene 372782 373660 . + . ID=gene-PUW38_01735;Name=PUW38_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01735 CP118116.1 Protein Homology CDS 372782 373660 . + 0 ID=cds-WJG81568.1;Parent=gene-PUW38_01735;Dbxref=NCBI_GP:WJG81568.1;Name=WJG81568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=PUW38_01735;product=fumarylacetoacetate hydrolase family protein;protein_id=WJG81568.1;transl_table=11 CP118116.1 Genbank gene 373660 374574 . + . ID=gene-PUW38_01740;Name=PUW38_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01740 CP118116.1 Protein Homology CDS 373660 374574 . + 0 ID=cds-WJG81569.1;Parent=gene-PUW38_01740;Dbxref=NCBI_GP:WJG81569.1;Name=WJG81569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=PUW38_01740;product=alpha/beta hydrolase;protein_id=WJG81569.1;transl_table=11 CP118116.1 Genbank gene 374608 375573 . + . ID=gene-PUW38_01745;Name=PUW38_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01745 CP118116.1 Protein Homology CDS 374608 375573 . + 0 ID=cds-WJG81570.1;Parent=gene-PUW38_01745;Dbxref=NCBI_GP:WJG81570.1;Name=WJG81570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=PUW38_01745;product=LysR family transcriptional regulator;protein_id=WJG81570.1;transl_table=11 CP118116.1 Genbank gene 375518 375790 . - . ID=gene-PUW38_01750;Name=PUW38_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01750 CP118116.1 Protein Homology CDS 375518 375790 . - 0 ID=cds-WJG81571.1;Parent=gene-PUW38_01750;Dbxref=NCBI_GP:WJG81571.1;Name=WJG81571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=PUW38_01750;product=cytoplasmic protein;protein_id=WJG81571.1;transl_table=11 CP118116.1 Genbank gene 376481 376879 . + . ID=gene-PUW38_01755;Name=PUW38_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01755 CP118116.1 Protein Homology CDS 376481 376879 . + 0 ID=cds-WJG81572.1;Parent=gene-PUW38_01755;Dbxref=NCBI_GP:WJG81572.1;Name=WJG81572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=PUW38_01755;product=outer membrane protein;protein_id=WJG81572.1;transl_table=11 CP118116.1 Genbank gene 376926 377684 . - . ID=gene-PUW38_01760;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=PUW38_01760 CP118116.1 Protein Homology CDS 376926 377684 . - 0 ID=cds-WJG81573.1;Parent=gene-PUW38_01760;Dbxref=NCBI_GP:WJG81573.1;Name=WJG81573.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=PUW38_01760;product=fimbrial biogenesis chaperone StbE;protein_id=WJG81573.1;transl_table=11 CP118116.1 Genbank gene 377650 378975 . - . ID=gene-PUW38_01765;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=PUW38_01765 CP118116.1 Protein Homology CDS 377650 378975 . - 0 ID=cds-WJG81574.1;Parent=gene-PUW38_01765;Dbxref=NCBI_GP:WJG81574.1;Name=WJG81574.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=PUW38_01765;product=fimbrial usher protein StbD;protein_id=WJG81574.1;transl_table=11 CP118116.1 Genbank pseudogene 378980 381541 . - . ID=gene-PUW38_01770;Name=PUW38_01770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01770;pseudo=true CP118116.1 Protein Homology CDS 378980 381541 . - 0 ID=cds-PUW38_01770;Parent=gene-PUW38_01770;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=PUW38_01770;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 381525 382286 . - . ID=gene-PUW38_01775;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=PUW38_01775 CP118116.1 Protein Homology CDS 381525 382286 . - 0 ID=cds-WJG81575.1;Parent=gene-PUW38_01775;Dbxref=NCBI_GP:WJG81575.1;Name=WJG81575.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=PUW38_01775;product=fimbrial biogenesis chaperone StbB;protein_id=WJG81575.1;transl_table=11 CP118116.1 Genbank gene 382348 382884 . - . ID=gene-PUW38_01780;Name=PUW38_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01780 CP118116.1 Protein Homology CDS 382348 382884 . - 0 ID=cds-WJG81576.1;Parent=gene-PUW38_01780;Dbxref=NCBI_GP:WJG81576.1;Name=WJG81576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=PUW38_01780;product=fimbrial protein;protein_id=WJG81576.1;transl_table=11 CP118116.1 Genbank gene 383547 383882 . + . ID=gene-PUW38_01785;Name=PUW38_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01785 CP118116.1 GeneMarkS-2+ CDS 383547 383882 . + 0 ID=cds-WJG81577.1;Parent=gene-PUW38_01785;Dbxref=NCBI_GP:WJG81577.1;Name=WJG81577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_01785;product=hypothetical protein;protein_id=WJG81577.1;transl_table=11 CP118116.1 Genbank gene 383885 384280 . + . ID=gene-PUW38_01790;Name=PUW38_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01790 CP118116.1 GeneMarkS-2+ CDS 383885 384280 . + 0 ID=cds-WJG81578.1;Parent=gene-PUW38_01790;Dbxref=NCBI_GP:WJG81578.1;Name=WJG81578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_01790;product=hypothetical protein;protein_id=WJG81578.1;transl_table=11 CP118116.1 Genbank gene 384253 384552 . + . ID=gene-PUW38_01795;Name=PUW38_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01795 CP118116.1 Protein Homology CDS 384253 384552 . + 0 ID=cds-WJG81579.1;Parent=gene-PUW38_01795;Dbxref=NCBI_GP:WJG81579.1;Name=WJG81579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=PUW38_01795;product=hypothetical protein;protein_id=WJG81579.1;transl_table=11 CP118116.1 Genbank gene 385054 386628 . + . ID=gene-PUW38_01800;Name=PUW38_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01800 CP118116.1 Protein Homology CDS 385054 386628 . + 0 ID=cds-WJG81580.1;Parent=gene-PUW38_01800;Dbxref=NCBI_GP:WJG81580.1;Name=WJG81580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=PUW38_01800;product=cyclic diguanylate phosphodiesterase;protein_id=WJG81580.1;transl_table=11 CP118116.1 Genbank pseudogene 386728 387470 . + . ID=gene-PUW38_01805;Name=PUW38_01805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01805;pseudo=true CP118116.1 Protein Homology CDS 386728 387470 . + 0 ID=cds-PUW38_01805;Parent=gene-PUW38_01805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=PUW38_01805;product=response regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 387443 387931 . + . ID=gene-PUW38_01810;Name=PUW38_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01810 CP118116.1 Protein Homology CDS 387443 387931 . + 0 ID=cds-WJG81581.1;Parent=gene-PUW38_01810;Dbxref=NCBI_GP:WJG81581.1;Name=WJG81581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=PUW38_01810;product=hypothetical protein;protein_id=WJG81581.1;transl_table=11 CP118116.1 Genbank gene 388331 388855 . + . ID=gene-PUW38_01815;Name=PUW38_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01815 CP118116.1 Protein Homology CDS 388331 388855 . + 0 ID=cds-WJG81582.1;Parent=gene-PUW38_01815;Dbxref=NCBI_GP:WJG81582.1;Name=WJG81582.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=PUW38_01815;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WJG81582.1;transl_table=11 CP118116.1 Genbank pseudogene 388999 389638 . + . ID=gene-PUW38_01820;Name=PUW38_01820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01820;pseudo=true CP118116.1 Protein Homology CDS 388999 389638 . + 0 ID=cds-PUW38_01820;Parent=gene-PUW38_01820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=PUW38_01820;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 389649 389873 . + . ID=gene-PUW38_01825;Name=PUW38_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01825 CP118116.1 Protein Homology CDS 389649 389873 . + 0 ID=cds-WJG81583.1;Parent=gene-PUW38_01825;Dbxref=NCBI_GP:WJG81583.1;Name=WJG81583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=PUW38_01825;product=hypothetical protein;protein_id=WJG81583.1;transl_table=11 CP118116.1 Genbank gene 389931 390290 . + . ID=gene-PUW38_01830;Name=PUW38_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01830 CP118116.1 Protein Homology CDS 389931 390290 . + 0 ID=cds-WJG81584.1;Parent=gene-PUW38_01830;Dbxref=NCBI_GP:WJG81584.1;Name=WJG81584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=PUW38_01830;product=DUF4156 domain-containing protein;protein_id=WJG81584.1;transl_table=11 CP118116.1 Genbank gene 390360 391817 . - . ID=gene-PUW38_01835;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=PUW38_01835 CP118116.1 Protein Homology CDS 390360 391817 . - 0 ID=cds-WJG81585.1;Parent=gene-PUW38_01835;Dbxref=NCBI_GP:WJG81585.1;Name=WJG81585.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=PUW38_01835;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WJG81585.1;transl_table=11 CP118116.1 Genbank gene 391834 395001 . - . ID=gene-PUW38_01840;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=PUW38_01840 CP118116.1 Protein Homology CDS 391834 395001 . - 0 ID=cds-WJG81586.1;Parent=gene-PUW38_01840;Dbxref=NCBI_GP:WJG81586.1;Name=WJG81586.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=PUW38_01840;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WJG81586.1;transl_table=11 CP118116.1 Genbank gene 394998 396224 . - . ID=gene-PUW38_01845;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=PUW38_01845 CP118116.1 Protein Homology CDS 394998 396224 . - 0 ID=cds-WJG81587.1;Parent=gene-PUW38_01845;Dbxref=NCBI_GP:WJG81587.1;Name=WJG81587.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=PUW38_01845;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WJG81587.1;transl_table=11 CP118116.1 Genbank pseudogene 396501 398803 . + . ID=gene-PUW38_01850;Name=golT;gbkey=Gene;gene=golT;gene_biotype=pseudogene;locus_tag=PUW38_01850;pseudo=true CP118116.1 Protein Homology CDS 396501 398803 . + 0 ID=cds-PUW38_01850;Parent=gene-PUW38_01850;Note=frameshifted;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083300.1;locus_tag=PUW38_01850;product=gold/copper-translocating P-type ATPase GolT;pseudo=true;transl_table=11 CP118116.1 Genbank gene 398800 399264 . + . ID=gene-PUW38_01855;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=PUW38_01855 CP118116.1 Protein Homology CDS 398800 399264 . + 0 ID=cds-WJG81588.1;Parent=gene-PUW38_01855;Dbxref=NCBI_GP:WJG81588.1;Name=WJG81588.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=PUW38_01855;product=Au(I) sensor transcriptional regulator GolS;protein_id=WJG81588.1;transl_table=11 CP118116.1 Genbank gene 399342 399536 . + . ID=gene-PUW38_01860;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=PUW38_01860 CP118116.1 Protein Homology CDS 399342 399536 . + 0 ID=cds-WJG81589.1;Parent=gene-PUW38_01860;Dbxref=NCBI_GP:WJG81589.1;Name=WJG81589.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=PUW38_01860;product=gold resistance metallochaperone GolB;protein_id=WJG81589.1;transl_table=11 CP118116.1 Genbank gene 399828 401081 . + . ID=gene-PUW38_01865;Name=PUW38_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01865 CP118116.1 Protein Homology CDS 399828 401081 . + 0 ID=cds-WJG81590.1;Parent=gene-PUW38_01865;Dbxref=NCBI_GP:WJG81590.1;Name=WJG81590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=PUW38_01865;product=MFS transporter;protein_id=WJG81590.1;transl_table=11 CP118116.1 Genbank pseudogene 401270 403223 . + . ID=gene-PUW38_01870;Name=PUW38_01870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01870;pseudo=true CP118116.1 Protein Homology CDS 401270 403223 . + 0 ID=cds-PUW38_01870;Parent=gene-PUW38_01870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=PUW38_01870;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 403233 406205 . + . ID=gene-PUW38_01875;Name=PUW38_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01875 CP118116.1 Protein Homology CDS 403233 406205 . + 0 ID=cds-WJG83142.1;Parent=gene-PUW38_01875;Dbxref=NCBI_GP:WJG83142.1;Name=WJG83142.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=PUW38_01875;product=type III restriction-modification system endonuclease;protein_id=WJG83142.1;transl_table=11 CP118116.1 Genbank gene 406482 406583 . + . ID=gene-PUW38_01880;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=PUW38_01880 CP118116.1 Protein Homology CDS 406482 406583 . + 0 ID=cds-WJG81591.1;Parent=gene-PUW38_01880;Dbxref=NCBI_GP:WJG81591.1;Name=WJG81591.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=PUW38_01880;product=small effector SsaA;protein_id=WJG81591.1;transl_table=11 CP118116.1 Genbank gene 406700 408103 . + . ID=gene-PUW38_01885;Name=PUW38_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01885 CP118116.1 Protein Homology CDS 406700 408103 . + 0 ID=cds-WJG81592.1;Parent=gene-PUW38_01885;Dbxref=NCBI_GP:WJG81592.1;Name=WJG81592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=PUW38_01885;product=cytochrome ubiquinol oxidase subunit I;protein_id=WJG81592.1;transl_table=11 CP118116.1 Genbank gene 408100 409110 . + . ID=gene-PUW38_01890;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PUW38_01890 CP118116.1 Protein Homology CDS 408100 409110 . + 0 ID=cds-WJG81593.1;Parent=gene-PUW38_01890;Dbxref=NCBI_GP:WJG81593.1;Name=WJG81593.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=PUW38_01890;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WJG81593.1;transl_table=11 CP118116.1 Genbank gene 409110 409241 . + . ID=gene-PUW38_01895;Name=PUW38_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01895 CP118116.1 Protein Homology CDS 409110 409241 . + 0 ID=cds-WJG81594.1;Parent=gene-PUW38_01895;Dbxref=NCBI_GP:WJG81594.1;Name=WJG81594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241460.1;locus_tag=PUW38_01895;product=DUF2474 domain-containing protein;protein_id=WJG81594.1;transl_table=11 CP118116.1 Genbank pseudogene 409448 410453 . + . ID=gene-PUW38_01900;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=pseudogene;locus_tag=PUW38_01900;pseudo=true CP118116.1 Protein Homology CDS 409448 410453 . + 0 ID=cds-PUW38_01900;Parent=gene-PUW38_01900;Note=frameshifted;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=PUW38_01900;product=ferrioxamine uptake transcriptional regulator FoxR;pseudo=true;transl_table=11 CP118116.1 Genbank gene 410599 412707 . + . ID=gene-PUW38_01905;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=PUW38_01905 CP118116.1 Protein Homology CDS 410599 412707 . + 0 ID=cds-WJG81595.1;Parent=gene-PUW38_01905;Dbxref=NCBI_GP:WJG81595.1;Name=WJG81595.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=PUW38_01905;product=ferrioxamine B receptor FoxA;protein_id=WJG81595.1;transl_table=11 CP118116.1 Genbank pseudogene 412748 413379 . - . ID=gene-PUW38_01910;Name=PUW38_01910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01910;pseudo=true CP118116.1 Protein Homology CDS 412748 413379 . - 0 ID=cds-PUW38_01910;Parent=gene-PUW38_01910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=PUW38_01910;product=LysE family transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 413611 413886 . + . ID=gene-PUW38_01915;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=PUW38_01915 CP118116.1 Protein Homology CDS 413611 413886 . + 0 ID=cds-WJG81596.1;Parent=gene-PUW38_01915;Dbxref=NCBI_GP:WJG81596.1;Name=WJG81596.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=PUW38_01915;product=DUF1471 family periplasmic protein YahO;protein_id=WJG81596.1;transl_table=11 CP118116.1 Genbank gene 414022 415647 . - . ID=gene-PUW38_01920;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=PUW38_01920 CP118116.1 Protein Homology CDS 414022 415647 . - 0 ID=cds-WJG81597.1;Parent=gene-PUW38_01920;Dbxref=NCBI_GP:WJG81597.1;Name=WJG81597.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=PUW38_01920;product=propionate catabolism operon regulatory protein PrpR;protein_id=WJG81597.1;transl_table=11 CP118116.1 Genbank gene 415913 416800 . + . ID=gene-PUW38_01925;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=PUW38_01925 CP118116.1 Protein Homology CDS 415913 416800 . + 0 ID=cds-WJG81598.1;Parent=gene-PUW38_01925;Dbxref=NCBI_GP:WJG81598.1;Name=WJG81598.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=PUW38_01925;product=methylisocitrate lyase;protein_id=WJG81598.1;transl_table=11 CP118116.1 Genbank gene 416923 418092 . + . ID=gene-PUW38_01930;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=PUW38_01930 CP118116.1 Protein Homology CDS 416923 418092 . + 0 ID=cds-WJG81599.1;Parent=gene-PUW38_01930;Dbxref=NCBI_GP:WJG81599.1;Name=WJG81599.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=PUW38_01930;product=2-methylcitrate synthase;protein_id=WJG81599.1;transl_table=11 CP118116.1 Genbank gene 418130 419581 . + . ID=gene-PUW38_01935;Name=PUW38_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01935 CP118116.1 Protein Homology CDS 418130 419581 . + 0 ID=cds-WJG81600.1;Parent=gene-PUW38_01935;Dbxref=NCBI_GP:WJG81600.1;Name=WJG81600.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=PUW38_01935;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WJG81600.1;transl_table=11 CP118116.1 Genbank gene 419622 421508 . + . ID=gene-PUW38_01940;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=PUW38_01940 CP118116.1 Protein Homology CDS 419622 421508 . + 0 ID=cds-WJG81601.1;Parent=gene-PUW38_01940;Dbxref=NCBI_GP:WJG81601.1;Name=WJG81601.1;Ontology_term=GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=PUW38_01940;product=propionate--CoA ligase;protein_id=WJG81601.1;transl_table=11 CP118116.1 Genbank gene 421612 422586 . - . ID=gene-PUW38_01945;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=PUW38_01945 CP118116.1 Protein Homology CDS 421612 422586 . - 0 ID=cds-WJG81602.1;Parent=gene-PUW38_01945;Dbxref=NCBI_GP:WJG81602.1;Name=WJG81602.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=PUW38_01945;product=porphobilinogen synthase;protein_id=WJG81602.1;transl_table=11 CP118116.1 Genbank gene 423100 426114 . + . ID=gene-PUW38_01950;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=PUW38_01950 CP118116.1 Protein Homology CDS 423100 426114 . + 0 ID=cds-WJG81603.1;Parent=gene-PUW38_01950;Dbxref=NCBI_GP:WJG81603.1;Name=WJG81603.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556401.1;locus_tag=PUW38_01950;product=autotransporter adhesin EhaB;protein_id=WJG81603.1;transl_table=11 CP118116.1 Genbank gene 426200 426823 . + . ID=gene-PUW38_01955;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=PUW38_01955 CP118116.1 Protein Homology CDS 426200 426823 . + 0 ID=cds-WJG81604.1;Parent=gene-PUW38_01955;Dbxref=NCBI_GP:WJG81604.1;Name=WJG81604.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=PUW38_01955;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WJG81604.1;transl_table=11 CP118116.1 Genbank gene 426868 428025 . - . ID=gene-PUW38_01960;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=PUW38_01960 CP118116.1 Protein Homology CDS 426868 428025 . - 0 ID=cds-WJG81605.1;Parent=gene-PUW38_01960;Dbxref=NCBI_GP:WJG81605.1;Name=WJG81605.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=PUW38_01960;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WJG81605.1;transl_table=11 CP118116.1 Genbank gene 428372 429592 . + . ID=gene-PUW38_01965;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=PUW38_01965 CP118116.1 Protein Homology CDS 428372 429592 . + 0 ID=cds-WJG83143.1;Parent=gene-PUW38_01965;Dbxref=NCBI_GP:WJG83143.1;Name=WJG83143.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=PUW38_01965;product=peptide antibiotic transporter SbmA;protein_id=WJG83143.1;transl_table=11 CP118116.1 Genbank gene 429607 430701 . + . ID=gene-PUW38_01970;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=PUW38_01970 CP118116.1 Protein Homology CDS 429607 430701 . + 0 ID=cds-WJG81606.1;Parent=gene-PUW38_01970;Dbxref=NCBI_GP:WJG81606.1;Name=WJG81606.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=PUW38_01970;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WJG81606.1;transl_table=11 CP118116.1 Genbank gene 430739 431047 . - . ID=gene-PUW38_01975;Name=PUW38_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01975 CP118116.1 Protein Homology CDS 430739 431047 . - 0 ID=cds-WJG81607.1;Parent=gene-PUW38_01975;Dbxref=NCBI_GP:WJG81607.1;Name=WJG81607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=PUW38_01975;product=YaiY family protein;protein_id=WJG81607.1;transl_table=11 CP118116.1 Genbank gene 431315 431530 . + . ID=gene-PUW38_01980;Name=PUW38_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01980 CP118116.1 Protein Homology CDS 431315 431530 . + 0 ID=cds-WJG81608.1;Parent=gene-PUW38_01980;Dbxref=NCBI_GP:WJG81608.1;Name=WJG81608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=PUW38_01980;product=DUF2754 family protein;protein_id=WJG81608.1;transl_table=11 CP118116.1 Genbank gene 431556 432650 . - . ID=gene-PUW38_01985;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=PUW38_01985 CP118116.1 Protein Homology CDS 431556 432650 . - 0 ID=cds-WJG81609.1;Parent=gene-PUW38_01985;Dbxref=NCBI_GP:WJG81609.1;Name=WJG81609.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=PUW38_01985;product=D-alanine--D-alanine ligase;protein_id=WJG81609.1;transl_table=11 CP118116.1 Genbank gene 432728 433441 . + . ID=gene-PUW38_01990;Name=PUW38_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_01990 CP118116.1 Protein Homology CDS 432728 433441 . + 0 ID=cds-WJG81610.1;Parent=gene-PUW38_01990;Dbxref=NCBI_GP:WJG81610.1;Name=WJG81610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=PUW38_01990;product=extensin family protein;protein_id=WJG81610.1;transl_table=11 CP118116.1 Genbank pseudogene 433610 434821 . + . ID=gene-PUW38_01995;Name=PUW38_01995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_01995;pseudo=true CP118116.1 Protein Homology CDS 433610 434821 . + 0 ID=cds-PUW38_01995;Parent=gene-PUW38_01995;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=PUW38_01995;product=multidrug efflux MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 435118 435378 . + . ID=gene-PUW38_02000;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=PUW38_02000 CP118116.1 Protein Homology CDS 435118 435378 . + 0 ID=cds-WJG81611.1;Parent=gene-PUW38_02000;Dbxref=NCBI_GP:WJG81611.1;Name=WJG81611.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=PUW38_02000;product=anti-adapter protein IraP;protein_id=WJG81611.1;transl_table=11 CP118116.1 Genbank gene 435727 436047 . + . ID=gene-PUW38_02005;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=PUW38_02005 CP118116.1 Protein Homology CDS 435727 436047 . + 0 ID=cds-WJG81612.1;Parent=gene-PUW38_02005;Dbxref=NCBI_GP:WJG81612.1;Name=WJG81612.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=PUW38_02005;product=phosphate starvation-inducible protein PsiF;protein_id=WJG81612.1;transl_table=11 CP118116.1 Genbank gene 436139 437251 . + . ID=gene-PUW38_02010;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=PUW38_02010 CP118116.1 Protein Homology CDS 436139 437251 . + 0 ID=cds-WJG81613.1;Parent=gene-PUW38_02010;Dbxref=NCBI_GP:WJG81613.1;Name=WJG81613.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=PUW38_02010;product=diguanylate cyclase AdrA;protein_id=WJG81613.1;transl_table=11 CP118116.1 Genbank gene 437266 438075 . - . ID=gene-PUW38_02015;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=PUW38_02015 CP118116.1 Protein Homology CDS 437266 438075 . - 0 ID=cds-WJG81614.1;Parent=gene-PUW38_02015;Dbxref=NCBI_GP:WJG81614.1;Name=WJG81614.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=PUW38_02015;product=pyrroline-5-carboxylate reductase;protein_id=WJG81614.1;transl_table=11 CP118116.1 Genbank pseudogene 438215 438370 . + . ID=gene-PUW38_02020;Name=PUW38_02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02020;pseudo=true CP118116.1 Protein Homology CDS 438215 438370 . + 0 ID=cds-PUW38_02020;Parent=gene-PUW38_02020;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=PUW38_02020;product=YaiI/YqxD family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 438597 439142 . + . ID=gene-PUW38_02025;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=PUW38_02025 CP118116.1 Protein Homology CDS 438597 439142 . + 0 ID=cds-WJG81615.1;Parent=gene-PUW38_02025;Dbxref=NCBI_GP:WJG81615.1;Name=WJG81615.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=PUW38_02025;product=shikimate kinase AroL;protein_id=WJG81615.1;transl_table=11 CP118116.1 Genbank gene 439169 439360 . + . ID=gene-PUW38_02030;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=PUW38_02030 CP118116.1 Protein Homology CDS 439169 439360 . + 0 ID=cds-WJG81616.1;Parent=gene-PUW38_02030;Dbxref=NCBI_GP:WJG81616.1;Name=WJG81616.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=PUW38_02030;product=protein YaiA;protein_id=WJG81616.1;transl_table=11 CP118116.1 Genbank gene 439611 440288 . + . ID=gene-PUW38_02035;Name=PUW38_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02035 CP118116.1 Protein Homology CDS 439611 440288 . + 0 ID=cds-WJG83144.1;Parent=gene-PUW38_02035;Dbxref=NCBI_GP:WJG83144.1;Name=WJG83144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=PUW38_02035;product=AroM family protein;protein_id=WJG83144.1;transl_table=11 CP118116.1 Genbank gene 440359 440643 . + . ID=gene-PUW38_02040;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=PUW38_02040 CP118116.1 Protein Homology CDS 440359 440643 . + 0 ID=cds-WJG81617.1;Parent=gene-PUW38_02040;Dbxref=NCBI_GP:WJG81617.1;Name=WJG81617.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=PUW38_02040;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WJG81617.1;transl_table=11 CP118116.1 Genbank gene 440681 441592 . - . ID=gene-PUW38_02045;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=PUW38_02045 CP118116.1 Protein Homology CDS 440681 441592 . - 0 ID=cds-WJG81618.1;Parent=gene-PUW38_02045;Dbxref=NCBI_GP:WJG81618.1;Name=WJG81618.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=PUW38_02045;product=recombination-associated protein RdgC;protein_id=WJG81618.1;transl_table=11 CP118116.1 Genbank gene 441718 442626 . + . ID=gene-PUW38_02050;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=PUW38_02050 CP118116.1 Protein Homology CDS 441718 442626 . + 0 ID=cds-WJG81619.1;Parent=gene-PUW38_02050;Dbxref=NCBI_GP:WJG81619.1;Name=WJG81619.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=PUW38_02050;product=fructokinase;protein_id=WJG81619.1;transl_table=11 CP118116.1 Genbank gene 442648 443820 . - . ID=gene-PUW38_02055;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=PUW38_02055 CP118116.1 Protein Homology CDS 442648 443820 . - 0 ID=cds-WJG81620.1;Parent=gene-PUW38_02055;Dbxref=NCBI_GP:WJG81620.1;Name=WJG81620.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=PUW38_02055;product=MFS transporter AraJ;protein_id=WJG81620.1;transl_table=11 CP118116.1 Genbank gene 443993 447133 . - . ID=gene-PUW38_02060;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=PUW38_02060 CP118116.1 Protein Homology CDS 443993 447133 . - 0 ID=cds-WJG81621.1;Parent=gene-PUW38_02060;Dbxref=NCBI_GP:WJG81621.1;Name=WJG81621.1;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=PUW38_02060;product=exonuclease subunit SbcC;protein_id=WJG81621.1;transl_table=11 CP118116.1 Genbank gene 447130 448332 . - . ID=gene-PUW38_02065;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=PUW38_02065 CP118116.1 Protein Homology CDS 447130 448332 . - 0 ID=cds-WJG81622.1;Parent=gene-PUW38_02065;Dbxref=NCBI_GP:WJG81622.1;Name=WJG81622.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=PUW38_02065;product=exonuclease subunit SbcD;protein_id=WJG81622.1;transl_table=11 CP118116.1 Genbank gene 448547 449236 . + . ID=gene-PUW38_02070;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=PUW38_02070 CP118116.1 Protein Homology CDS 448547 449236 . + 0 ID=cds-WJG81623.1;Parent=gene-PUW38_02070;Dbxref=NCBI_GP:WJG81623.1;Name=WJG81623.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=PUW38_02070;product=phosphate response regulator transcription factor PhoB;protein_id=WJG81623.1;transl_table=11 CP118116.1 Genbank gene 449306 450601 . + . ID=gene-PUW38_02075;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=PUW38_02075 CP118116.1 Protein Homology CDS 449306 450601 . + 0 ID=cds-WJG81624.1;Parent=gene-PUW38_02075;Dbxref=NCBI_GP:WJG81624.1;Name=WJG81624.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=PUW38_02075;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WJG81624.1;transl_table=11 CP118116.1 Genbank gene 451010 452329 . + . ID=gene-PUW38_02080;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PUW38_02080 CP118116.1 Protein Homology CDS 451010 452329 . + 0 ID=cds-WJG81625.1;Parent=gene-PUW38_02080;Dbxref=NCBI_GP:WJG81625.1;Name=WJG81625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=PUW38_02080;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WJG81625.1;transl_table=11 CP118116.1 Genbank gene 452404 453774 . + . ID=gene-PUW38_02085;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=PUW38_02085 CP118116.1 Protein Homology CDS 452404 453774 . + 0 ID=cds-WJG83145.1;Parent=gene-PUW38_02085;Dbxref=NCBI_GP:WJG83145.1;Name=WJG83145.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=PUW38_02085;product=proline-specific permease ProY;protein_id=WJG83145.1;transl_table=11 CP118116.1 Genbank gene 453936 455753 . + . ID=gene-PUW38_02090;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=PUW38_02090 CP118116.1 Protein Homology CDS 453936 455753 . + 0 ID=cds-WJG81626.1;Parent=gene-PUW38_02090;Dbxref=NCBI_GP:WJG81626.1;Name=WJG81626.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=PUW38_02090;product=maltodextrin glucosidase;protein_id=WJG81626.1;transl_table=11 CP118116.1 Genbank gene 455825 456427 . - . ID=gene-PUW38_02095;Name=PUW38_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02095 CP118116.1 Protein Homology CDS 455825 456427 . - 0 ID=cds-WJG81627.1;Parent=gene-PUW38_02095;Dbxref=NCBI_GP:WJG81627.1;Name=WJG81627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=PUW38_02095;product=peroxiredoxin;protein_id=WJG81627.1;transl_table=11 CP118116.1 Genbank gene 456636 457217 . - . ID=gene-PUW38_02100;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=PUW38_02100 CP118116.1 Protein Homology CDS 456636 457217 . - 0 ID=cds-WJG81628.1;Parent=gene-PUW38_02100;Dbxref=NCBI_GP:WJG81628.1;Name=WJG81628.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=PUW38_02100;product=ACP phosphodiesterase;protein_id=WJG81628.1;transl_table=11 CP118116.1 Genbank gene 457311 458375 . + . ID=gene-PUW38_02105;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=PUW38_02105 CP118116.1 Protein Homology CDS 457311 458375 . + 0 ID=cds-WJG81629.1;Parent=gene-PUW38_02105;Dbxref=NCBI_GP:WJG81629.1;Name=WJG81629.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=PUW38_02105;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WJG81629.1;transl_table=11 CP118116.1 Genbank gene 458572 459699 . + . ID=gene-PUW38_02110;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=PUW38_02110 CP118116.1 Protein Homology CDS 458572 459699 . + 0 ID=cds-WJG81630.1;Parent=gene-PUW38_02110;Dbxref=NCBI_GP:WJG81630.1;Name=WJG81630.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=PUW38_02110;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WJG81630.1;transl_table=11 CP118116.1 Genbank gene 459722 460054 . + . ID=gene-PUW38_02115;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=PUW38_02115 CP118116.1 Protein Homology CDS 459722 460054 . + 0 ID=cds-WJG81631.1;Parent=gene-PUW38_02115;Dbxref=NCBI_GP:WJG81631.1;Name=WJG81631.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=PUW38_02115;product=preprotein translocase subunit YajC;protein_id=WJG81631.1;transl_table=11 CP118116.1 Genbank pseudogene 460082 461928 . + . ID=gene-PUW38_02120;Name=secD;gbkey=Gene;gene=secD;gene_biotype=pseudogene;locus_tag=PUW38_02120;pseudo=true CP118116.1 Protein Homology CDS 460082 461928 . + 0 ID=cds-PUW38_02120;Parent=gene-PUW38_02120;Note=frameshifted;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=PUW38_02120;product=protein translocase subunit SecD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 461939 462910 . + . ID=gene-PUW38_02125;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=PUW38_02125 CP118116.1 Protein Homology CDS 461939 462910 . + 0 ID=cds-WJG81632.1;Parent=gene-PUW38_02125;Dbxref=NCBI_GP:WJG81632.1;Name=WJG81632.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=PUW38_02125;product=protein translocase subunit SecF;protein_id=WJG81632.1;transl_table=11 CP118116.1 Genbank gene 463055 463420 . + . ID=gene-PUW38_02130;Name=PUW38_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02130 CP118116.1 Protein Homology CDS 463055 463420 . + 0 ID=cds-WJG81633.1;Parent=gene-PUW38_02130;Dbxref=NCBI_GP:WJG81633.1;Name=WJG81633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=PUW38_02130;product=VOC family protein;protein_id=WJG81633.1;transl_table=11 CP118116.1 Genbank gene 463446 464138 . + . ID=gene-PUW38_02135;Name=PUW38_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02135 CP118116.1 Protein Homology CDS 463446 464138 . + 0 ID=cds-WJG81634.1;Parent=gene-PUW38_02135;Dbxref=NCBI_GP:WJG81634.1;Name=WJG81634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=PUW38_02135;product=YafY family protein;protein_id=WJG81634.1;transl_table=11 CP118116.1 Genbank gene 464308 464655 . + . ID=gene-PUW38_02140;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=PUW38_02140 CP118116.1 Protein Homology CDS 464308 464655 . + 0 ID=cds-WJG81635.1;Parent=gene-PUW38_02140;Dbxref=NCBI_GP:WJG81635.1;Name=WJG81635.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=PUW38_02140;product=HNH nuclease YajD;protein_id=WJG81635.1;transl_table=11 CP118116.1 Genbank gene 465093 465200 . + . ID=gene-PUW38_02145;Name=PUW38_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02145 CP118116.1 Protein Homology CDS 465093 465200 . + 0 ID=cds-WJG81636.1;Parent=gene-PUW38_02145;Dbxref=NCBI_GP:WJG81636.1;Name=WJG81636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=PUW38_02145;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WJG81636.1;transl_table=11 CP118116.1 Genbank gene 465284 466147 . - . ID=gene-PUW38_02150;Name=PUW38_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02150 CP118116.1 Protein Homology CDS 465284 466147 . - 0 ID=cds-WJG81637.1;Parent=gene-PUW38_02150;Dbxref=NCBI_GP:WJG81637.1;Name=WJG81637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=PUW38_02150;product=nucleoside-specific channel-forming protein Tsx;protein_id=WJG81637.1;transl_table=11 CP118116.1 Genbank gene 466447 466986 . - . ID=gene-PUW38_02155;Name=PUW38_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02155 CP118116.1 Protein Homology CDS 466447 466986 . - 0 ID=cds-WJG81638.1;Parent=gene-PUW38_02155;Dbxref=NCBI_GP:WJG81638.1;Name=WJG81638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=PUW38_02155;product=DUF3251 domain-containing protein;protein_id=WJG81638.1;transl_table=11 CP118116.1 Genbank gene 467138 467587 . + . ID=gene-PUW38_02160;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=PUW38_02160 CP118116.1 Protein Homology CDS 467138 467587 . + 0 ID=cds-WJG81639.1;Parent=gene-PUW38_02160;Dbxref=NCBI_GP:WJG81639.1;Name=WJG81639.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=PUW38_02160;product=transcriptional regulator NrdR;protein_id=WJG81639.1;transl_table=11 CP118116.1 Genbank gene 467591 468694 . + . ID=gene-PUW38_02165;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=PUW38_02165 CP118116.1 Protein Homology CDS 467591 468694 . + 0 ID=cds-WJG81640.1;Parent=gene-PUW38_02165;Dbxref=NCBI_GP:WJG81640.1;Name=WJG81640.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=PUW38_02165;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WJG81640.1;transl_table=11 CP118116.1 Genbank gene 468783 469253 . + . ID=gene-PUW38_02170;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PUW38_02170 CP118116.1 Protein Homology CDS 468783 469253 . + 0 ID=cds-WJG81641.1;Parent=gene-PUW38_02170;Dbxref=NCBI_GP:WJG81641.1;Name=WJG81641.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=PUW38_02170;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WJG81641.1;transl_table=11 CP118116.1 Genbank gene 469274 469693 . + . ID=gene-PUW38_02175;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=PUW38_02175 CP118116.1 Protein Homology CDS 469274 469693 . + 0 ID=cds-WJG81642.1;Parent=gene-PUW38_02175;Dbxref=NCBI_GP:WJG81642.1;Name=WJG81642.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=PUW38_02175;product=transcription antitermination factor NusB;protein_id=WJG81642.1;transl_table=11 CP118116.1 Genbank gene 469772 470752 . + . ID=gene-PUW38_02180;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=PUW38_02180 CP118116.1 Protein Homology CDS 469772 470752 . + 0 ID=cds-WJG81643.1;Parent=gene-PUW38_02180;Dbxref=NCBI_GP:WJG81643.1;Name=WJG81643.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=PUW38_02180;product=thiamine-phosphate kinase;protein_id=WJG81643.1;transl_table=11 CP118116.1 Genbank gene 470730 471245 . + . ID=gene-PUW38_02185;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=PUW38_02185 CP118116.1 Protein Homology CDS 470730 471245 . + 0 ID=cds-WJG81644.1;Parent=gene-PUW38_02185;Dbxref=NCBI_GP:WJG81644.1;Name=WJG81644.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=PUW38_02185;product=phosphatidylglycerophosphatase A;protein_id=WJG81644.1;transl_table=11 CP118116.1 Genbank gene 471349 472323 . - . ID=gene-PUW38_02190;Name=PUW38_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02190 CP118116.1 Protein Homology CDS 471349 472323 . - 0 ID=cds-WJG81645.1;Parent=gene-PUW38_02190;Dbxref=NCBI_GP:WJG81645.1;Name=WJG81645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=PUW38_02190;product=aldo/keto reductase;protein_id=WJG81645.1;transl_table=11 CP118116.1 Genbank pseudogene 472380 474241 . - . ID=gene-PUW38_02195;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=pseudogene;locus_tag=PUW38_02195;pseudo=true CP118116.1 Protein Homology CDS 472380 474241 . - 0 ID=cds-PUW38_02195;Parent=gene-PUW38_02195;Note=frameshifted;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=PUW38_02195;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 474265 475164 . - . ID=gene-PUW38_02200;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=PUW38_02200 CP118116.1 Protein Homology CDS 474265 475164 . - 0 ID=cds-WJG81646.1;Parent=gene-PUW38_02200;Dbxref=NCBI_GP:WJG81646.1;Name=WJG81646.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=PUW38_02200;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WJG81646.1;transl_table=11 CP118116.1 Genbank gene 475165 475407 . - . ID=gene-PUW38_02205;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=PUW38_02205 CP118116.1 Protein Homology CDS 475165 475407 . - 0 ID=cds-WJG81647.1;Parent=gene-PUW38_02205;Dbxref=NCBI_GP:WJG81647.1;Name=WJG81647.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=PUW38_02205;product=exodeoxyribonuclease VII small subunit;protein_id=WJG81647.1;transl_table=11 CP118116.1 Genbank gene 475617 477065 . + . ID=gene-PUW38_02210;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=PUW38_02210 CP118116.1 Protein Homology CDS 475617 477065 . + 0 ID=cds-WJG81648.1;Parent=gene-PUW38_02210;Dbxref=NCBI_GP:WJG81648.1;Name=WJG81648.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=PUW38_02210;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WJG81648.1;transl_table=11 CP118116.1 Genbank gene 477109 477906 . - . ID=gene-PUW38_02215;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=PUW38_02215 CP118116.1 Protein Homology CDS 477109 477906 . - 0 ID=cds-WJG81649.1;Parent=gene-PUW38_02215;Dbxref=NCBI_GP:WJG81649.1;Name=WJG81649.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnV;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=PUW38_02215;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WJG81649.1;transl_table=11 CP118116.1 Genbank pseudogene 477900 478768 . - . ID=gene-PUW38_02220;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=pseudogene;locus_tag=PUW38_02220;pseudo=true CP118116.1 Protein Homology CDS 477900 478768 . - 0 ID=cds-PUW38_02220;Parent=gene-PUW38_02220;Note=frameshifted;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnU;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052714.1;locus_tag=PUW38_02220;product=2-aminoethylphosphonate ABC transporter permease subunit;pseudo=true;transl_table=11 CP118116.1 Genbank gene 478771 479880 . - . ID=gene-PUW38_02225;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=PUW38_02225 CP118116.1 Protein Homology CDS 478771 479880 . - 0 ID=cds-WJG81650.1;Parent=gene-PUW38_02225;Dbxref=NCBI_GP:WJG81650.1;Name=WJG81650.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=PUW38_02225;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WJG81650.1;transl_table=11 CP118116.1 Genbank gene 479886 480899 . - . ID=gene-PUW38_02230;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=PUW38_02230 CP118116.1 Protein Homology CDS 479886 480899 . - 0 ID=cds-WJG81651.1;Parent=gene-PUW38_02230;Dbxref=NCBI_GP:WJG81651.1;Name=WJG81651.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=PUW38_02230;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WJG81651.1;transl_table=11 CP118116.1 Genbank gene 481097 481816 . - . ID=gene-PUW38_02235;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=PUW38_02235 CP118116.1 Protein Homology CDS 481097 481816 . - 0 ID=cds-WJG81652.1;Parent=gene-PUW38_02235;Dbxref=NCBI_GP:WJG81652.1;Name=WJG81652.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=PUW38_02235;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WJG81652.1;transl_table=11 CP118116.1 Genbank gene 481956 483059 . + . ID=gene-PUW38_02240;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=PUW38_02240 CP118116.1 Protein Homology CDS 481956 483059 . + 0 ID=cds-WJG81653.1;Parent=gene-PUW38_02240;Dbxref=NCBI_GP:WJG81653.1;Name=WJG81653.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=PUW38_02240;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WJG81653.1;transl_table=11 CP118116.1 Genbank gene 483069 483878 . + . ID=gene-PUW38_02245;Name=PUW38_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02245 CP118116.1 Protein Homology CDS 483069 483878 . + 0 ID=cds-WJG83146.1;Parent=gene-PUW38_02245;Dbxref=NCBI_GP:WJG83146.1;Name=WJG83146.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=PUW38_02245;product=phosphonoacetaldehyde hydrolase;protein_id=WJG83146.1;transl_table=11 CP118116.1 Genbank gene 484021 484611 . - . ID=gene-PUW38_02250;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=PUW38_02250 CP118116.1 Protein Homology CDS 484021 484611 . - 0 ID=cds-WJG81654.1;Parent=gene-PUW38_02250;Dbxref=NCBI_GP:WJG81654.1;Name=WJG81654.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=PUW38_02250;product=protein deglycase YajL;protein_id=WJG81654.1;transl_table=11 CP118116.1 Genbank gene 484574 485485 . - . ID=gene-PUW38_02255;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=PUW38_02255 CP118116.1 Protein Homology CDS 484574 485485 . - 0 ID=cds-WJG81655.1;Parent=gene-PUW38_02255;Dbxref=NCBI_GP:WJG81655.1;Name=WJG81655.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=PUW38_02255;product=2-dehydropantoate 2-reductase;protein_id=WJG81655.1;transl_table=11 CP118116.1 Genbank gene 485611 486102 . + . ID=gene-PUW38_02260;Name=PUW38_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02260 CP118116.1 Protein Homology CDS 485611 486102 . + 0 ID=cds-WJG81656.1;Parent=gene-PUW38_02260;Dbxref=NCBI_GP:WJG81656.1;Name=WJG81656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=PUW38_02260;product=YajQ family cyclic di-GMP-binding protein;protein_id=WJG81656.1;transl_table=11 CP118116.1 Genbank gene 486149 487513 . - . ID=gene-PUW38_02265;Name=PUW38_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02265 CP118116.1 Protein Homology CDS 486149 487513 . - 0 ID=cds-WJG81657.1;Parent=gene-PUW38_02265;Dbxref=NCBI_GP:WJG81657.1;Name=WJG81657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=PUW38_02265;product=MFS transporter;protein_id=WJG81657.1;transl_table=11 CP118116.1 Genbank pseudogene 488038 489548 . + . ID=gene-PUW38_02270;Name=PUW38_02270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02270;pseudo=true CP118116.1 Protein Homology CDS 488038 489548 . + 0 ID=cds-PUW38_02270;Parent=gene-PUW38_02270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=PUW38_02270;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 489560 491053 . + . ID=gene-PUW38_02275;Name=PUW38_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02275 CP118116.1 Protein Homology CDS 489560 491053 . + 0 ID=cds-WJG81658.1;Parent=gene-PUW38_02275;Dbxref=NCBI_GP:WJG81658.1;Name=WJG81658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=PUW38_02275;product=tetratricopeptide repeat protein;protein_id=WJG81658.1;transl_table=11 CP118116.1 Genbank gene 491135 492025 . - . ID=gene-PUW38_02280;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=PUW38_02280 CP118116.1 Protein Homology CDS 491135 492025 . - 0 ID=cds-WJG81659.1;Parent=gene-PUW38_02280;Dbxref=NCBI_GP:WJG81659.1;Name=WJG81659.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=PUW38_02280;product=heme o synthase;protein_id=WJG81659.1;transl_table=11 CP118116.1 Genbank gene 492037 492366 . - . ID=gene-PUW38_02285;Name=PUW38_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02285 CP118116.1 Protein Homology CDS 492037 492366 . - 0 ID=cds-WJG81660.1;Parent=gene-PUW38_02285;Dbxref=NCBI_GP:WJG81660.1;Name=WJG81660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=PUW38_02285;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WJG81660.1;transl_table=11 CP118116.1 Genbank gene 492366 492980 . - . ID=gene-PUW38_02290;Name=PUW38_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02290 CP118116.1 Protein Homology CDS 492366 492980 . - 0 ID=cds-WJG81661.1;Parent=gene-PUW38_02290;Dbxref=NCBI_GP:WJG81661.1;Name=WJG81661.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=PUW38_02290;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WJG81661.1;transl_table=11 CP118116.1 Genbank gene 492970 494961 . - . ID=gene-PUW38_02295;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=PUW38_02295 CP118116.1 Protein Homology CDS 492970 494961 . - 0 ID=cds-WJG81662.1;Parent=gene-PUW38_02295;Dbxref=NCBI_GP:WJG81662.1;Name=WJG81662.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=PUW38_02295;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WJG81662.1;transl_table=11 CP118116.1 Genbank gene 494972 495928 . - . ID=gene-PUW38_02300;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=PUW38_02300 CP118116.1 Protein Homology CDS 494972 495928 . - 0 ID=cds-WJG81663.1;Parent=gene-PUW38_02300;Dbxref=NCBI_GP:WJG81663.1;Name=WJG81663.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=PUW38_02300;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WJG81663.1;transl_table=11 CP118116.1 Genbank pseudogene 496380 497854 . - . ID=gene-PUW38_02305;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=pseudogene;locus_tag=PUW38_02305;pseudo=true CP118116.1 Protein Homology CDS 496380 497854 . - 0 ID=cds-PUW38_02305;Parent=gene-PUW38_02305;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=PUW38_02305;product=muropeptide MFS transporter AmpG;pseudo=true;transl_table=11 CP118116.1 Genbank gene 497898 498476 . - . ID=gene-PUW38_02310;Name=PUW38_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02310 CP118116.1 Protein Homology CDS 497898 498476 . - 0 ID=cds-WJG83147.1;Parent=gene-PUW38_02310;Dbxref=NCBI_GP:WJG83147.1;Name=WJG83147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=PUW38_02310;product=lipoprotein;protein_id=WJG83147.1;transl_table=11 CP118116.1 Genbank gene 498780 499097 . + . ID=gene-PUW38_02315;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=PUW38_02315 CP118116.1 Protein Homology CDS 498780 499097 . + 0 ID=cds-WJG81664.1;Parent=gene-PUW38_02315;Dbxref=NCBI_GP:WJG81664.1;Name=WJG81664.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=PUW38_02315;product=transcriptional regulator BolA;protein_id=WJG81664.1;transl_table=11 CP118116.1 Genbank gene 499444 500742 . + . ID=gene-PUW38_02320;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=PUW38_02320 CP118116.1 Protein Homology CDS 499444 500742 . + 0 ID=cds-WJG81665.1;Parent=gene-PUW38_02320;Dbxref=NCBI_GP:WJG81665.1;Name=WJG81665.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=PUW38_02320;product=trigger factor;protein_id=WJG81665.1;transl_table=11 CP118116.1 Genbank gene 500990 501613 . + . ID=gene-PUW38_02325;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=PUW38_02325 CP118116.1 Protein Homology CDS 500990 501613 . + 0 ID=cds-WJG81666.1;Parent=gene-PUW38_02325;Dbxref=NCBI_GP:WJG81666.1;Name=WJG81666.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=PUW38_02325;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WJG81666.1;transl_table=11 CP118116.1 Genbank gene 501865 503136 . + . ID=gene-PUW38_02330;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=PUW38_02330 CP118116.1 Protein Homology CDS 501865 503136 . + 0 ID=cds-WJG81667.1;Parent=gene-PUW38_02330;Dbxref=NCBI_GP:WJG81667.1;Name=WJG81667.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=PUW38_02330;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WJG81667.1;transl_table=11 CP118116.1 Genbank gene 503322 505676 . + . ID=gene-PUW38_02335;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=PUW38_02335 CP118116.1 Protein Homology CDS 503322 505676 . + 0 ID=cds-WJG81668.1;Parent=gene-PUW38_02335;Dbxref=NCBI_GP:WJG81668.1;Name=WJG81668.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=PUW38_02335;product=endopeptidase La;protein_id=WJG81668.1;transl_table=11 CP118116.1 Genbank gene 505867 506157 . + . ID=gene-PUW38_02340;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=PUW38_02340 CP118116.1 Protein Homology CDS 505867 506157 . + 0 ID=cds-WJG83148.1;Parent=gene-PUW38_02340;Dbxref=NCBI_GP:WJG83148.1;Name=WJG83148.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=PUW38_02340;product=DNA-binding protein HU-beta;protein_id=WJG83148.1;transl_table=11 CP118116.1 Genbank gene 506448 508319 . + . ID=gene-PUW38_02345;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=PUW38_02345 CP118116.1 Protein Homology CDS 506448 508319 . + 0 ID=cds-WJG81669.1;Parent=gene-PUW38_02345;Dbxref=NCBI_GP:WJG81669.1;Name=WJG81669.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=PUW38_02345;product=peptidylprolyl isomerase;protein_id=WJG81669.1;transl_table=11 CP118116.1 Genbank gene 508469 508843 . + . ID=gene-PUW38_02350;Name=PUW38_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02350 CP118116.1 Protein Homology CDS 508469 508843 . + 0 ID=cds-WJG81670.1;Parent=gene-PUW38_02350;Dbxref=NCBI_GP:WJG81670.1;Name=WJG81670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=PUW38_02350;product=helix-hairpin-helix domain-containing protein;protein_id=WJG81670.1;transl_table=11 CP118116.1 Genbank pseudogene 508947 509343 . + . ID=gene-PUW38_02355;Name=PUW38_02355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02355;pseudo=true CP118116.1 Protein Homology CDS 508947 509343 . + 0 ID=cds-PUW38_02355;Parent=gene-PUW38_02355;Note=frameshifted;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=PUW38_02355;product=YbgC/FadM family acyl-CoA thioesterase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 509449 510144 . - . ID=gene-PUW38_02360;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=PUW38_02360 CP118116.1 Protein Homology CDS 509449 510144 . - 0 ID=cds-WJG81671.1;Parent=gene-PUW38_02360;Dbxref=NCBI_GP:WJG81671.1;Name=WJG81671.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=PUW38_02360;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WJG81671.1;transl_table=11 CP118116.1 Genbank gene 510209 511909 . - . ID=gene-PUW38_02365;Name=PUW38_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02365 CP118116.1 Protein Homology CDS 510209 511909 . - 0 ID=cds-WJG81672.1;Parent=gene-PUW38_02365;Dbxref=NCBI_GP:WJG81672.1;Name=WJG81672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=PUW38_02365;product=SgrR family transcriptional regulator;protein_id=WJG81672.1;transl_table=11 CP118116.1 Genbank pseudogene 512010 512827 . + . ID=gene-PUW38_02370;Name=cof;gbkey=Gene;gene=cof;gene_biotype=pseudogene;locus_tag=PUW38_02370;pseudo=true CP118116.1 Protein Homology CDS 512010 512827 . + 0 ID=cds-PUW38_02370;Parent=gene-PUW38_02370;Note=frameshifted;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=PUW38_02370;product=HMP-PP phosphatase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 512877 513932 . - . ID=gene-PUW38_02375;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=PUW38_02375 CP118116.1 Protein Homology CDS 512877 513932 . - 0 ID=cds-WJG81673.1;Parent=gene-PUW38_02375;Dbxref=NCBI_GP:WJG81673.1;Name=WJG81673.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=PUW38_02375;product=cysteine desulfhydrase;protein_id=WJG81673.1;transl_table=11 CP118116.1 Genbank gene 514045 514503 . + . ID=gene-PUW38_02380;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=PUW38_02380 CP118116.1 Protein Homology CDS 514045 514503 . + 0 ID=cds-WJG81674.1;Parent=gene-PUW38_02380;Dbxref=NCBI_GP:WJG81674.1;Name=WJG81674.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=PUW38_02380;product=DNA-binding transcriptional regulator DecR;protein_id=WJG81674.1;transl_table=11 CP118116.1 Genbank gene 514544 516316 . + . ID=gene-PUW38_02385;Name=PUW38_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02385 CP118116.1 Protein Homology CDS 514544 516316 . + 0 ID=cds-WJG81675.1;Parent=gene-PUW38_02385;Dbxref=NCBI_GP:WJG81675.1;Name=WJG81675.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=PUW38_02385;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WJG81675.1;transl_table=11 CP118116.1 Genbank gene 516309 518090 . + . ID=gene-PUW38_02390;Name=PUW38_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02390 CP118116.1 Protein Homology CDS 516309 518090 . + 0 ID=cds-WJG81676.1;Parent=gene-PUW38_02390;Dbxref=NCBI_GP:WJG81676.1;Name=WJG81676.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=PUW38_02390;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WJG81676.1;transl_table=11 CP118116.1 Genbank gene 518122 518247 . - . ID=gene-PUW38_02395;Name=PUW38_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02395 CP118116.1 GeneMarkS-2+ CDS 518122 518247 . - 0 ID=cds-WJG81677.1;Parent=gene-PUW38_02395;Dbxref=NCBI_GP:WJG81677.1;Name=WJG81677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_02395;product=hypothetical protein;protein_id=WJG81677.1;transl_table=11 CP118116.1 Genbank gene 518303 518641 . + . ID=gene-PUW38_02400;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=PUW38_02400 CP118116.1 Protein Homology CDS 518303 518641 . + 0 ID=cds-WJG81678.1;Parent=gene-PUW38_02400;Dbxref=NCBI_GP:WJG81678.1;Name=WJG81678.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=PUW38_02400;product=P-II family nitrogen regulator;protein_id=WJG81678.1;transl_table=11 CP118116.1 Genbank gene 518673 519959 . + . ID=gene-PUW38_02405;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=PUW38_02405 CP118116.1 Protein Homology CDS 518673 519959 . + 0 ID=cds-WJG81679.1;Parent=gene-PUW38_02405;Dbxref=NCBI_GP:WJG81679.1;Name=WJG81679.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=PUW38_02405;product=ammonium transporter AmtB;protein_id=WJG81679.1;transl_table=11 CP118116.1 Genbank gene 520059 520919 . - . ID=gene-PUW38_02410;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=PUW38_02410 CP118116.1 Protein Homology CDS 520059 520919 . - 0 ID=cds-WJG81680.1;Parent=gene-PUW38_02410;Dbxref=NCBI_GP:WJG81680.1;Name=WJG81680.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=PUW38_02410;product=acyl-CoA thioesterase II;protein_id=WJG81680.1;transl_table=11 CP118116.1 Genbank gene 521134 521703 . + . ID=gene-PUW38_02415;Name=PUW38_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02415 CP118116.1 Protein Homology CDS 521134 521703 . + 0 ID=cds-WJG81681.1;Parent=gene-PUW38_02415;Dbxref=NCBI_GP:WJG81681.1;Name=WJG81681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=PUW38_02415;product=YbaY family lipoprotein;protein_id=WJG81681.1;transl_table=11 CP118116.1 Genbank gene 521736 522125 . - . ID=gene-PUW38_02420;Name=PUW38_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02420 CP118116.1 Protein Homology CDS 521736 522125 . - 0 ID=cds-WJG81682.1;Parent=gene-PUW38_02420;Dbxref=NCBI_GP:WJG81682.1;Name=WJG81682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=PUW38_02420;product=MGMT family protein;protein_id=WJG81682.1;transl_table=11 CP118116.1 Genbank gene 522210 522306 . + . ID=gene-PUW38_02425;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=PUW38_02425 CP118116.1 cmsearch SRP_RNA 522210 522306 . + . ID=rna-PUW38_02425;Parent=gene-PUW38_02425;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_02425;product=signal recognition particle sRNA small type CP118116.1 cmsearch exon 522210 522306 . + . ID=exon-PUW38_02425-1;Parent=rna-PUW38_02425;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_02425;product=signal recognition particle sRNA small type CP118116.1 Genbank gene 522356 523906 . - . ID=gene-PUW38_02430;Name=PUW38_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02430 CP118116.1 Protein Homology CDS 522356 523906 . - 0 ID=cds-WJG81683.1;Parent=gene-PUW38_02430;Dbxref=NCBI_GP:WJG81683.1;Name=WJG81683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=PUW38_02430;product=EAL domain-containing protein;protein_id=WJG81683.1;transl_table=11 CP118116.1 Genbank gene 524131 524391 . + . ID=gene-PUW38_02435;Name=PUW38_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02435 CP118116.1 Protein Homology CDS 524131 524391 . + 0 ID=cds-WJG81684.1;Parent=gene-PUW38_02435;Dbxref=NCBI_GP:WJG81684.1;Name=WJG81684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=PUW38_02435;product=type B 50S ribosomal protein L31;protein_id=WJG81684.1;transl_table=11 CP118116.1 Genbank gene 524397 524537 . + . ID=gene-PUW38_02440;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=PUW38_02440 CP118116.1 Protein Homology CDS 524397 524537 . + 0 ID=cds-WJG81685.1;Parent=gene-PUW38_02440;Dbxref=NCBI_GP:WJG81685.1;Name=WJG81685.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=PUW38_02440;product=type B 50S ribosomal protein L36;protein_id=WJG81685.1;transl_table=11 CP118116.1 Genbank gene 524593 525063 . - . ID=gene-PUW38_02445;Name=PUW38_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02445 CP118116.1 Protein Homology CDS 524593 525063 . - 0 ID=cds-WJG81686.1;Parent=gene-PUW38_02445;Dbxref=NCBI_GP:WJG81686.1;Name=WJG81686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=PUW38_02445;product=YlaC family protein;protein_id=WJG81686.1;transl_table=11 CP118116.1 Genbank gene 525181 525732 . - . ID=gene-PUW38_02450;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=PUW38_02450 CP118116.1 Protein Homology CDS 525181 525732 . - 0 ID=cds-WJG81687.1;Parent=gene-PUW38_02450;Dbxref=NCBI_GP:WJG81687.1;Name=WJG81687.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=PUW38_02450;product=maltose O-acetyltransferase;protein_id=WJG81687.1;transl_table=11 CP118116.1 Genbank gene 525911 526129 . - . ID=gene-PUW38_02455;Name=PUW38_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02455 CP118116.1 Protein Homology CDS 525911 526129 . - 0 ID=cds-WJG81688.1;Parent=gene-PUW38_02455;Dbxref=NCBI_GP:WJG81688.1;Name=WJG81688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=PUW38_02455;product=HHA domain-containing protein;protein_id=WJG81688.1;transl_table=11 CP118116.1 Genbank gene 526157 526531 . - . ID=gene-PUW38_02460;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=PUW38_02460 CP118116.1 Protein Homology CDS 526157 526531 . - 0 ID=cds-WJG81689.1;Parent=gene-PUW38_02460;Dbxref=NCBI_GP:WJG81689.1;Name=WJG81689.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=PUW38_02460;product=Hha toxicity modulator TomB;protein_id=WJG81689.1;transl_table=11 CP118116.1 Genbank gene 527026 530175 . - . ID=gene-PUW38_02465;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=PUW38_02465 CP118116.1 Protein Homology CDS 527026 530175 . - 0 ID=cds-WJG81690.1;Parent=gene-PUW38_02465;Dbxref=NCBI_GP:WJG81690.1;Name=WJG81690.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=PUW38_02465;product=efflux RND transporter permease AcrB;protein_id=WJG81690.1;transl_table=11 CP118116.1 Genbank gene 530198 531391 . - . ID=gene-PUW38_02470;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=PUW38_02470 CP118116.1 Protein Homology CDS 530198 531391 . - 0 ID=cds-WJG81691.1;Parent=gene-PUW38_02470;Dbxref=NCBI_GP:WJG81691.1;Name=WJG81691.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=PUW38_02470;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WJG81691.1;transl_table=11 CP118116.1 Genbank gene 531533 532186 . + . ID=gene-PUW38_02475;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=PUW38_02475 CP118116.1 Protein Homology CDS 531533 532186 . + 0 ID=cds-WJG81692.1;Parent=gene-PUW38_02475;Dbxref=NCBI_GP:WJG81692.1;Name=WJG81692.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=PUW38_02475;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WJG81692.1;transl_table=11 CP118116.1 Genbank gene 532305 535667 . + . ID=gene-PUW38_02480;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=PUW38_02480 CP118116.1 Protein Homology CDS 532305 535667 . + 0 ID=cds-WJG81693.1;Parent=gene-PUW38_02480;Dbxref=NCBI_GP:WJG81693.1;Name=WJG81693.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=PUW38_02480;product=mechanosensitive channel MscK;protein_id=WJG81693.1;transl_table=11 CP118116.1 Genbank gene 535709 536644 . - . ID=gene-PUW38_02485;Name=PUW38_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02485 CP118116.1 Protein Homology CDS 535709 536644 . - 0 ID=cds-WJG81694.1;Parent=gene-PUW38_02485;Dbxref=NCBI_GP:WJG81694.1;Name=WJG81694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=PUW38_02485;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG81694.1;transl_table=11 CP118116.1 Genbank gene 536714 536881 . - . ID=gene-PUW38_02490;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=PUW38_02490 CP118116.1 Protein Homology CDS 536714 536881 . - 0 ID=cds-WJG81695.1;Parent=gene-PUW38_02490;Dbxref=NCBI_GP:WJG81695.1;Name=WJG81695.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=PUW38_02490;product=pleiotropic regulatory protein RsmS;protein_id=WJG81695.1;transl_table=11 CP118116.1 Genbank gene 536895 537422 . - . ID=gene-PUW38_02495;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=PUW38_02495 CP118116.1 Protein Homology CDS 536895 537422 . - 0 ID=cds-WJG81696.1;Parent=gene-PUW38_02495;Dbxref=NCBI_GP:WJG81696.1;Name=WJG81696.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=PUW38_02495;product=primosomal replication protein N'';protein_id=WJG81696.1;transl_table=11 CP118116.1 Genbank gene 537491 537868 . + . ID=gene-PUW38_02500;Name=PUW38_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02500 CP118116.1 Protein Homology CDS 537491 537868 . + 0 ID=cds-WJG81697.1;Parent=gene-PUW38_02500;Dbxref=NCBI_GP:WJG81697.1;Name=WJG81697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=PUW38_02500;product=DUF454 family protein;protein_id=WJG81697.1;transl_table=11 CP118116.1 Genbank gene 538021 538572 . + . ID=gene-PUW38_02505;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=PUW38_02505 CP118116.1 Protein Homology CDS 538021 538572 . + 0 ID=cds-WJG81698.1;Parent=gene-PUW38_02505;Dbxref=NCBI_GP:WJG81698.1;Name=WJG81698.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=PUW38_02505;product=adenine phosphoribosyltransferase;protein_id=WJG81698.1;transl_table=11 CP118116.1 Genbank gene 538686 540614 . + . ID=gene-PUW38_02510;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=PUW38_02510 CP118116.1 Protein Homology CDS 538686 540614 . + 0 ID=cds-WJG81699.1;Parent=gene-PUW38_02510;Dbxref=NCBI_GP:WJG81699.1;Name=WJG81699.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=PUW38_02510;product=DNA polymerase III subunit gamma/tau;protein_id=WJG81699.1;transl_table=11 CP118116.1 cmsearch sequence_feature 539947 540011 . + . ID=id-PUW38_02510;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_02510 CP118116.1 Genbank gene 540658 540987 . + . ID=gene-PUW38_02515;Name=PUW38_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02515 CP118116.1 Protein Homology CDS 540658 540987 . + 0 ID=cds-WJG81700.1;Parent=gene-PUW38_02515;Dbxref=NCBI_GP:WJG81700.1;Name=WJG81700.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=PUW38_02515;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WJG81700.1;transl_table=11 CP118116.1 Genbank gene 540987 541592 . + . ID=gene-PUW38_02520;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=PUW38_02520 CP118116.1 Protein Homology CDS 540987 541592 . + 0 ID=cds-WJG81701.1;Parent=gene-PUW38_02520;Dbxref=NCBI_GP:WJG81701.1;Name=WJG81701.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=PUW38_02520;product=recombination mediator RecR;protein_id=WJG81701.1;transl_table=11 CP118116.1 Genbank gene 541703 543577 . + . ID=gene-PUW38_02525;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=PUW38_02525 CP118116.1 Protein Homology CDS 541703 543577 . + 0 ID=cds-WJG81702.1;Parent=gene-PUW38_02525;Dbxref=NCBI_GP:WJG81702.1;Name=WJG81702.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=PUW38_02525;product=molecular chaperone HtpG;protein_id=WJG81702.1;transl_table=11 CP118116.1 Genbank gene 543935 544579 . + . ID=gene-PUW38_02530;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=PUW38_02530 CP118116.1 Protein Homology CDS 543935 544579 . + 0 ID=cds-WJG81703.1;Parent=gene-PUW38_02530;Dbxref=NCBI_GP:WJG81703.1;Name=WJG81703.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=PUW38_02530;product=adenylate kinase;protein_id=WJG81703.1;transl_table=11 CP118116.1 Genbank gene 544808 545770 . + . ID=gene-PUW38_02535;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=PUW38_02535 CP118116.1 Protein Homology CDS 544808 545770 . + 0 ID=cds-WJG81704.1;Parent=gene-PUW38_02535;Dbxref=NCBI_GP:WJG81704.1;Name=WJG81704.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=PUW38_02535;product=ferrochelatase;protein_id=WJG81704.1;transl_table=11 CP118116.1 Genbank pseudogene 545767 546712 . - . ID=gene-PUW38_02540;Name=aes;gbkey=Gene;gene=aes;gene_biotype=pseudogene;locus_tag=PUW38_02540;pseudo=true CP118116.1 Protein Homology CDS 545767 546712 . - 0 ID=cds-PUW38_02540;Parent=gene-PUW38_02540;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=PUW38_02540;product=acetyl esterase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 546865 548169 . + . ID=gene-PUW38_02545;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=PUW38_02545 CP118116.1 Protein Homology CDS 546865 548169 . + 0 ID=cds-WJG81705.1;Parent=gene-PUW38_02545;Dbxref=NCBI_GP:WJG81705.1;Name=WJG81705.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=PUW38_02545;product=inosine/guanosine kinase;protein_id=WJG81705.1;transl_table=11 CP118116.1 Genbank gene 548218 549894 . - . ID=gene-PUW38_02550;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=PUW38_02550 CP118116.1 Protein Homology CDS 548218 549894 . - 0 ID=cds-WJG81706.1;Parent=gene-PUW38_02550;Dbxref=NCBI_GP:WJG81706.1;Name=WJG81706.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=PUW38_02550;product=YbaL family putative K(+) efflux transporter;protein_id=WJG81706.1;transl_table=11 CP118116.1 Genbank gene 550109 551329 . - . ID=gene-PUW38_02555;Name=PUW38_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02555 CP118116.1 Protein Homology CDS 550109 551329 . - 0 ID=cds-WJG81707.1;Parent=gene-PUW38_02555;Dbxref=NCBI_GP:WJG81707.1;Name=WJG81707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=PUW38_02555;product=MFS transporter;protein_id=WJG81707.1;transl_table=11 CP118116.1 Genbank gene 551502 553154 . + . ID=gene-PUW38_02560;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=PUW38_02560 CP118116.1 Protein Homology CDS 551502 553154 . + 0 ID=cds-WJG81708.1;Parent=gene-PUW38_02560;Dbxref=NCBI_GP:WJG81708.1;Name=WJG81708.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=PUW38_02560;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WJG81708.1;transl_table=11 CP118116.1 Genbank gene 553271 553750 . - . ID=gene-PUW38_02565;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=PUW38_02565 CP118116.1 Protein Homology CDS 553271 553750 . - 0 ID=cds-WJG81709.1;Parent=gene-PUW38_02565;Dbxref=NCBI_GP:WJG81709.1;Name=WJG81709.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=PUW38_02565;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WJG81709.1;transl_table=11 CP118116.1 Genbank gene 553952 554746 . - . ID=gene-PUW38_02570;Name=PUW38_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02570 CP118116.1 Protein Homology CDS 553952 554746 . - 0 ID=cds-WJG81710.1;Parent=gene-PUW38_02570;Dbxref=NCBI_GP:WJG81710.1;Name=WJG81710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=PUW38_02570;product=TraB/GumN family protein;protein_id=WJG81710.1;transl_table=11 CP118116.1 Genbank gene 554832 555659 . - . ID=gene-PUW38_02575;Name=PUW38_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02575 CP118116.1 Protein Homology CDS 554832 555659 . - 0 ID=cds-WJG81711.1;Parent=gene-PUW38_02575;Dbxref=NCBI_GP:WJG81711.1;Name=WJG81711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=PUW38_02575;product=DUF1311 domain-containing protein;protein_id=WJG81711.1;transl_table=11 CP118116.1 Genbank gene 555812 558313 . - . ID=gene-PUW38_02580;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=PUW38_02580 CP118116.1 Protein Homology CDS 555812 558313 . - 0 ID=cds-WJG81712.1;Parent=gene-PUW38_02580;Dbxref=NCBI_GP:WJG81712.1;Name=WJG81712.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=PUW38_02580;product=copper-exporting P-type ATPase CopA;protein_id=WJG81712.1;transl_table=11 CP118116.1 Genbank gene 558423 558839 . + . ID=gene-PUW38_02585;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=PUW38_02585 CP118116.1 Protein Homology CDS 558423 558839 . + 0 ID=cds-WJG81713.1;Parent=gene-PUW38_02585;Dbxref=NCBI_GP:WJG81713.1;Name=WJG81713.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=PUW38_02585;product=Cu(I)-responsive transcriptional regulator;protein_id=WJG81713.1;transl_table=11 CP118116.1 Genbank gene 558840 559292 . - . ID=gene-PUW38_02590;Name=PUW38_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02590 CP118116.1 Protein Homology CDS 558840 559292 . - 0 ID=cds-WJG81714.1;Parent=gene-PUW38_02590;Dbxref=NCBI_GP:WJG81714.1;Name=WJG81714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=PUW38_02590;product=NfeD family protein;protein_id=WJG81714.1;transl_table=11 CP118116.1 Genbank gene 559289 560206 . - . ID=gene-PUW38_02595;Name=PUW38_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02595 CP118116.1 Protein Homology CDS 559289 560206 . - 0 ID=cds-WJG81715.1;Parent=gene-PUW38_02595;Dbxref=NCBI_GP:WJG81715.1;Name=WJG81715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=PUW38_02595;product=SPFH/Band 7/PHB domain protein;protein_id=WJG81715.1;transl_table=11 CP118116.1 Genbank gene 560354 561031 . + . ID=gene-PUW38_02600;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=PUW38_02600 CP118116.1 Protein Homology CDS 560354 561031 . + 0 ID=cds-WJG81716.1;Parent=gene-PUW38_02600;Dbxref=NCBI_GP:WJG81716.1;Name=WJG81716.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=PUW38_02600;product=iron ABC transporter ATP-binding protein FetA;protein_id=WJG81716.1;transl_table=11 CP118116.1 Genbank gene 561018 561797 . + . ID=gene-PUW38_02605;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=PUW38_02605 CP118116.1 Protein Homology CDS 561018 561797 . + 0 ID=cds-WJG81717.1;Parent=gene-PUW38_02605;Dbxref=NCBI_GP:WJG81717.1;Name=WJG81717.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=PUW38_02605;product=iron export ABC transporter permease subunit FetB;protein_id=WJG81717.1;transl_table=11 CP118116.1 Genbank pseudogene 561883 562737 . - . ID=gene-PUW38_02610;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=pseudogene;locus_tag=PUW38_02610;pseudo=true CP118116.1 Protein Homology CDS 561883 562737 . - 0 ID=cds-PUW38_02610;Parent=gene-PUW38_02610;Note=internal stop;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=PUW38_02610;product=chaperedoxin;pseudo=true;transl_table=11 CP118116.1 Genbank gene 562797 563567 . - . ID=gene-PUW38_02615;Name=PUW38_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02615 CP118116.1 Protein Homology CDS 562797 563567 . - 0 ID=cds-WJG81718.1;Parent=gene-PUW38_02615;Dbxref=NCBI_GP:WJG81718.1;Name=WJG81718.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=PUW38_02615;product=SDR family oxidoreductase;protein_id=WJG81718.1;transl_table=11 CP118116.1 Genbank gene 563722 564336 . - . ID=gene-PUW38_02620;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=PUW38_02620 CP118116.1 Protein Homology CDS 563722 564336 . - 0 ID=cds-WJG81719.1;Parent=gene-PUW38_02620;Dbxref=NCBI_GP:WJG81719.1;Name=WJG81719.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=PUW38_02620;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WJG81719.1;transl_table=11 CP118116.1 Genbank gene 564307 564993 . + . ID=gene-PUW38_02625;Name=PUW38_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02625 CP118116.1 Protein Homology CDS 564307 564993 . + 0 ID=cds-WJG81720.1;Parent=gene-PUW38_02625;Dbxref=NCBI_GP:WJG81720.1;Name=WJG81720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=PUW38_02625;product=ABC transporter ATP-binding protein;protein_id=WJG81720.1;transl_table=11 CP118116.1 Genbank pseudogene 564990 567404 . + . ID=gene-PUW38_02630;Name=PUW38_02630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02630;pseudo=true CP118116.1 Protein Homology CDS 564990 567404 . + 0 ID=cds-PUW38_02630;Parent=gene-PUW38_02630;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=PUW38_02630;product=ABC transporter permease;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 567590 568723 . + . ID=gene-PUW38_02635;Name=PUW38_02635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02635;pseudo=true CP118116.1 Protein Homology CDS 567590 568723 . + 0 ID=cds-PUW38_02635;Parent=gene-PUW38_02635;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=PUW38_02635;product=porin;pseudo=true;transl_table=11 CP118116.1 Genbank gene 568980 569810 . + . ID=gene-PUW38_02640;Name=PUW38_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02640 CP118116.1 Protein Homology CDS 568980 569810 . + 0 ID=cds-WJG81721.1;Parent=gene-PUW38_02640;Dbxref=NCBI_GP:WJG81721.1;Name=WJG81721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=PUW38_02640;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WJG81721.1;transl_table=11 CP118116.1 Genbank gene 569847 570863 . + . ID=gene-PUW38_02645;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=PUW38_02645 CP118116.1 Protein Homology CDS 569847 570863 . + 0 ID=cds-WJG81722.1;Parent=gene-PUW38_02645;Dbxref=NCBI_GP:WJG81722.1;Name=WJG81722.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=PUW38_02645;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WJG81722.1;transl_table=11 CP118116.1 Genbank gene 570856 571515 . + . ID=gene-PUW38_02650;Name=PUW38_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02650 CP118116.1 Protein Homology CDS 570856 571515 . + 0 ID=cds-WJG81723.1;Parent=gene-PUW38_02650;Dbxref=NCBI_GP:WJG81723.1;Name=WJG81723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=PUW38_02650;product=ABC transporter permease;protein_id=WJG81723.1;transl_table=11 CP118116.1 Genbank gene 571554 572648 . - . ID=gene-PUW38_02655;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=PUW38_02655 CP118116.1 Protein Homology CDS 571554 572648 . - 0 ID=cds-WJG81724.1;Parent=gene-PUW38_02655;Dbxref=NCBI_GP:WJG81724.1;Name=WJG81724.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=PUW38_02655;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WJG81724.1;transl_table=11 CP118116.1 Genbank pseudogene 572718 573643 . - . ID=gene-PUW38_02660;Name=allS;gbkey=Gene;gene=allS;gene_biotype=pseudogene;locus_tag=PUW38_02660;pseudo=true CP118116.1 Protein Homology CDS 572718 573643 . - 0 ID=cds-PUW38_02660;Parent=gene-PUW38_02660;Note=frameshifted;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=PUW38_02660;product=HTH-type transcriptional activator AllS;pseudo=true;transl_table=11 CP118116.1 Genbank gene 573870 574352 . + . ID=gene-PUW38_02665;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=PUW38_02665 CP118116.1 Protein Homology CDS 573870 574352 . + 0 ID=cds-WJG81725.1;Parent=gene-PUW38_02665;Dbxref=NCBI_GP:WJG81725.1;Name=WJG81725.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764660.1;locus_tag=PUW38_02665;product=ureidoglycolate lyase;protein_id=WJG81725.1;transl_table=11 CP118116.1 Genbank gene 574431 575249 . + . ID=gene-PUW38_02670;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=PUW38_02670 CP118116.1 Protein Homology CDS 574431 575249 . + 0 ID=cds-WJG81726.1;Parent=gene-PUW38_02670;Dbxref=NCBI_GP:WJG81726.1;Name=WJG81726.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=PUW38_02670;product=HTH-type transcriptional repressor AllR;protein_id=WJG81726.1;transl_table=11 CP118116.1 Genbank gene 575334 577115 . + . ID=gene-PUW38_02675;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=PUW38_02675 CP118116.1 Protein Homology CDS 575334 577115 . + 0 ID=cds-WJG81727.1;Parent=gene-PUW38_02675;Dbxref=NCBI_GP:WJG81727.1;Name=WJG81727.1;Ontology_term=GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=PUW38_02675;product=glyoxylate carboligase;protein_id=WJG81727.1;transl_table=11 CP118116.1 Genbank gene 577128 577904 . + . ID=gene-PUW38_02680;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=PUW38_02680 CP118116.1 Protein Homology CDS 577128 577904 . + 0 ID=cds-WJG81728.1;Parent=gene-PUW38_02680;Dbxref=NCBI_GP:WJG81728.1;Name=WJG81728.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=PUW38_02680;product=hydroxypyruvate isomerase;protein_id=WJG81728.1;transl_table=11 CP118116.1 Genbank gene 578004 578882 . + . ID=gene-PUW38_02685;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=PUW38_02685 CP118116.1 Protein Homology CDS 578004 578882 . + 0 ID=cds-WJG81729.1;Parent=gene-PUW38_02685;Dbxref=NCBI_GP:WJG81729.1;Name=WJG81729.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=PUW38_02685;product=2-hydroxy-3-oxopropionate reductase;protein_id=WJG81729.1;transl_table=11 CP118116.1 Genbank gene 578948 580195 . + . ID=gene-PUW38_02690;Name=PUW38_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02690 CP118116.1 Protein Homology CDS 578948 580195 . + 0 ID=cds-WJG81730.1;Parent=gene-PUW38_02690;Dbxref=NCBI_GP:WJG81730.1;Name=WJG81730.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=PUW38_02690;product=MFS transporter;protein_id=WJG81730.1;transl_table=11 CP118116.1 Genbank gene 580291 581745 . + . ID=gene-PUW38_02695;Name=PUW38_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02695 CP118116.1 Protein Homology CDS 580291 581745 . + 0 ID=cds-WJG81731.1;Parent=gene-PUW38_02695;Dbxref=NCBI_GP:WJG81731.1;Name=WJG81731.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=PUW38_02695;product=putative allantoin permease;protein_id=WJG81731.1;transl_table=11 CP118116.1 Genbank gene 581824 583185 . + . ID=gene-PUW38_02700;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=PUW38_02700 CP118116.1 Protein Homology CDS 581824 583185 . + 0 ID=cds-WJG81732.1;Parent=gene-PUW38_02700;Dbxref=NCBI_GP:WJG81732.1;Name=WJG81732.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=PUW38_02700;product=allantoinase AllB;protein_id=WJG81732.1;transl_table=11 CP118116.1 Genbank gene 583244 584542 . + . ID=gene-PUW38_02705;Name=PUW38_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02705 CP118116.1 Protein Homology CDS 583244 584542 . + 0 ID=cds-WJG81733.1;Parent=gene-PUW38_02705;Dbxref=NCBI_GP:WJG81733.1;Name=WJG81733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=PUW38_02705;product=uracil/xanthine transporter;protein_id=WJG81733.1;transl_table=11 CP118116.1 Genbank gene 584565 585713 . + . ID=gene-PUW38_02710;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=PUW38_02710 CP118116.1 Protein Homology CDS 584565 585713 . + 0 ID=cds-WJG83149.1;Parent=gene-PUW38_02710;Dbxref=NCBI_GP:WJG83149.1;Name=WJG83149.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=PUW38_02710;product=glycerate 3-kinase;protein_id=WJG83149.1;transl_table=11 CP118116.1 Genbank gene 585793 586578 . - . ID=gene-PUW38_02715;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=PUW38_02715 CP118116.1 Protein Homology CDS 585793 586578 . - 0 ID=cds-WJG81734.1;Parent=gene-PUW38_02715;Dbxref=NCBI_GP:WJG81734.1;Name=WJG81734.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=PUW38_02715;product=(S)-ureidoglycine aminohydrolase;protein_id=WJG81734.1;transl_table=11 CP118116.1 Genbank gene 586589 587824 . - . ID=gene-PUW38_02720;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=PUW38_02720 CP118116.1 Protein Homology CDS 586589 587824 . - 0 ID=cds-WJG81735.1;Parent=gene-PUW38_02720;Dbxref=NCBI_GP:WJG81735.1;Name=WJG81735.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=PUW38_02720;product=allantoate deiminase;protein_id=WJG81735.1;transl_table=11 CP118116.1 Genbank pseudogene 587846 588894 . - . ID=gene-PUW38_02725;Name=allD;gbkey=Gene;gene=allD;gene_biotype=pseudogene;locus_tag=PUW38_02725;pseudo=true CP118116.1 Protein Homology CDS 587846 588894 . - 0 ID=cds-PUW38_02725;Parent=gene-PUW38_02725;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=PUW38_02725;product=ureidoglycolate dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 589209 590873 . + . ID=gene-PUW38_02730;Name=PUW38_02730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02730;pseudo=true CP118116.1 Protein Homology CDS 589209 590873 . + 0 ID=cds-PUW38_02730;Parent=gene-PUW38_02730;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=PUW38_02730;product=acyl-CoA synthetase FdrA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 590883 592142 . + . ID=gene-PUW38_02735;Name=PUW38_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02735 CP118116.1 Protein Homology CDS 590883 592142 . + 0 ID=cds-WJG81736.1;Parent=gene-PUW38_02735;Dbxref=NCBI_GP:WJG81736.1;Name=WJG81736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=PUW38_02735;product=DUF1116 domain-containing protein;protein_id=WJG81736.1;transl_table=11 CP118116.1 Genbank pseudogene 592154 592962 . + . ID=gene-PUW38_02740;Name=PUW38_02740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02740;pseudo=true CP118116.1 Protein Homology CDS 592154 592962 . + 0 ID=cds-PUW38_02740;Parent=gene-PUW38_02740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=PUW38_02740;product=DUF2877 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 592966 593859 . + . ID=gene-PUW38_02745;Name=PUW38_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02745 CP118116.1 Protein Homology CDS 592966 593859 . + 0 ID=cds-WJG81737.1;Parent=gene-PUW38_02745;Dbxref=NCBI_GP:WJG81737.1;Name=WJG81737.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=PUW38_02745;product=carbamate kinase;protein_id=WJG81737.1;transl_table=11 CP118116.1 Genbank gene 593900 594967 . - . ID=gene-PUW38_02750;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=PUW38_02750 CP118116.1 Protein Homology CDS 593900 594967 . - 0 ID=cds-WJG81738.1;Parent=gene-PUW38_02750;Dbxref=NCBI_GP:WJG81738.1;Name=WJG81738.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=PUW38_02750;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WJG81738.1;transl_table=11 CP118116.1 Genbank pseudogene 594964 595472 . - . ID=gene-PUW38_02755;Name=purE;gbkey=Gene;gene=purE;gene_biotype=pseudogene;locus_tag=PUW38_02755;pseudo=true CP118116.1 Protein Homology CDS 594964 595472 . - 0 ID=cds-PUW38_02755;Parent=gene-PUW38_02755;Note=frameshifted;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=PUW38_02755;product=5-(carboxyamino)imidazole ribonucleotide mutase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 595590 596312 . - . ID=gene-PUW38_02760;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=PUW38_02760 CP118116.1 Protein Homology CDS 595590 596312 . - 0 ID=cds-WJG81739.1;Parent=gene-PUW38_02760;Dbxref=NCBI_GP:WJG81739.1;Name=WJG81739.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=PUW38_02760;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WJG81739.1;transl_table=11 CP118116.1 Genbank gene 596315 596809 . - . ID=gene-PUW38_02765;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=PUW38_02765 CP118116.1 Protein Homology CDS 596315 596809 . - 0 ID=cds-WJG81740.1;Parent=gene-PUW38_02765;Dbxref=NCBI_GP:WJG81740.1;Name=WJG81740.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=PUW38_02765;product=peptidylprolyl isomerase B;protein_id=WJG81740.1;transl_table=11 CP118116.1 Genbank gene 596982 598367 . + . ID=gene-PUW38_02770;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=PUW38_02770 CP118116.1 Protein Homology CDS 596982 598367 . + 0 ID=cds-WJG81741.1;Parent=gene-PUW38_02770;Dbxref=NCBI_GP:WJG81741.1;Name=WJG81741.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=PUW38_02770;product=cysteine--tRNA ligase;protein_id=WJG81741.1;transl_table=11 CP118116.1 Genbank gene 598411 599235 . - . ID=gene-PUW38_02775;Name=PUW38_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02775 CP118116.1 Protein Homology CDS 598411 599235 . - 0 ID=cds-WJG81742.1;Parent=gene-PUW38_02775;Dbxref=NCBI_GP:WJG81742.1;Name=WJG81742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=PUW38_02775;product=DUF2145 domain-containing protein;protein_id=WJG81742.1;transl_table=11 CP118116.1 Genbank gene 599232 599669 . - . ID=gene-PUW38_02780;Name=PUW38_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02780 CP118116.1 Protein Homology CDS 599232 599669 . - 0 ID=cds-WJG81743.1;Parent=gene-PUW38_02780;Dbxref=NCBI_GP:WJG81743.1;Name=WJG81743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=PUW38_02780;product=STM0539 family protein;protein_id=WJG81743.1;transl_table=11 CP118116.1 Genbank gene 599662 600207 . - . ID=gene-PUW38_02785;Name=PUW38_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02785 CP118116.1 Protein Homology CDS 599662 600207 . - 0 ID=cds-WJG81744.1;Parent=gene-PUW38_02785;Dbxref=NCBI_GP:WJG81744.1;Name=WJG81744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=PUW38_02785;product=metal-dependent hydrolase;protein_id=WJG81744.1;transl_table=11 CP118116.1 Genbank gene 600291 600503 . - . ID=gene-PUW38_02790;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=PUW38_02790 CP118116.1 Protein Homology CDS 600291 600503 . - 0 ID=cds-WJG81745.1;Parent=gene-PUW38_02790;Dbxref=NCBI_GP:WJG81745.1;Name=WJG81745.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=PUW38_02790;product=ribosome-associated protein YbcJ;protein_id=WJG81745.1;transl_table=11 CP118116.1 Genbank gene 600505 601371 . - . ID=gene-PUW38_02795;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=PUW38_02795 CP118116.1 Protein Homology CDS 600505 601371 . - 0 ID=cds-WJG81746.1;Parent=gene-PUW38_02795;Dbxref=NCBI_GP:WJG81746.1;Name=WJG81746.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=PUW38_02795;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WJG81746.1;transl_table=11 CP118116.1 Genbank gene 601917 602474 . + . ID=gene-PUW38_02800;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=PUW38_02800 CP118116.1 Protein Homology CDS 601917 602474 . + 0 ID=cds-WJG81747.1;Parent=gene-PUW38_02800;Dbxref=NCBI_GP:WJG81747.1;Name=WJG81747.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=PUW38_02800;product=type 1 fimbrial protein subunit FimA;protein_id=WJG81747.1;transl_table=11 CP118116.1 Genbank gene 602548 603081 . + . ID=gene-PUW38_02805;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=PUW38_02805 CP118116.1 Protein Homology CDS 602548 603081 . + 0 ID=cds-WJG81748.1;Parent=gene-PUW38_02805;Dbxref=NCBI_GP:WJG81748.1;Name=WJG81748.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=PUW38_02805;product=type 1 fimbrial protein subunit FimI;protein_id=WJG81748.1;transl_table=11 CP118116.1 Genbank gene 603125 603817 . + . ID=gene-PUW38_02810;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=PUW38_02810 CP118116.1 Protein Homology CDS 603125 603817 . + 0 ID=cds-WJG81749.1;Parent=gene-PUW38_02810;Dbxref=NCBI_GP:WJG81749.1;Name=WJG81749.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=PUW38_02810;product=type 1 fimbria chaperone FimC;protein_id=WJG81749.1;transl_table=11 CP118116.1 Genbank pseudogene 603848 606458 . + . ID=gene-PUW38_02815;Name=PUW38_02815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02815;pseudo=true CP118116.1 Protein Homology CDS 603848 606458 . + 0 ID=cds-PUW38_02815;Parent=gene-PUW38_02815;Note=frameshifted;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=PUW38_02815;product=fimbrial biogenesis usher protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 606473 607480 . + . ID=gene-PUW38_02820;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=PUW38_02820 CP118116.1 Protein Homology CDS 606473 607480 . + 0 ID=cds-WJG81750.1;Parent=gene-PUW38_02820;Dbxref=NCBI_GP:WJG81750.1;Name=WJG81750.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=PUW38_02820;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WJG81750.1;transl_table=11 CP118116.1 Genbank gene 607490 608008 . + . ID=gene-PUW38_02825;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=PUW38_02825 CP118116.1 Protein Homology CDS 607490 608008 . + 0 ID=cds-WJG81751.1;Parent=gene-PUW38_02825;Dbxref=NCBI_GP:WJG81751.1;Name=WJG81751.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=PUW38_02825;product=fimbria assembly protein;protein_id=WJG81751.1;transl_table=11 CP118116.1 Genbank gene 608054 608686 . - . ID=gene-PUW38_02830;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=PUW38_02830 CP118116.1 Protein Homology CDS 608054 608686 . - 0 ID=cds-WJG81752.1;Parent=gene-PUW38_02830;Dbxref=NCBI_GP:WJG81752.1;Name=WJG81752.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=PUW38_02830;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WJG81752.1;transl_table=11 CP118116.1 Genbank pseudogene 609290 610008 . - . ID=gene-PUW38_02835;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=pseudogene;locus_tag=PUW38_02835;pseudo=true CP118116.1 Protein Homology CDS 609290 610008 . - 0 ID=cds-PUW38_02835;Parent=gene-PUW38_02835;Note=frameshifted;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=PUW38_02835;product=fimbria biosynthesis regulator FimY;pseudo=true;transl_table=11 CP118116.1 Genbank gene 610027 610338 . - . ID=gene-PUW38_02840;Name=PUW38_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02840 CP118116.1 Protein Homology CDS 610027 610338 . - 0 ID=cds-WJG81753.1;Parent=gene-PUW38_02840;Dbxref=NCBI_GP:WJG81753.1;Name=WJG81753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=PUW38_02840;product=diguanylate cyclase;protein_id=WJG81753.1;transl_table=11 CP118116.1 Genbank gene 610500 611096 . - . ID=gene-PUW38_02845;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=PUW38_02845 CP118116.1 Protein Homology CDS 610500 611096 . - 0 ID=cds-WJG81754.1;Parent=gene-PUW38_02845;Dbxref=NCBI_GP:WJG81754.1;Name=WJG81754.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=PUW38_02845;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WJG81754.1;transl_table=11 CP118116.1 Genbank gene 611351 611427 . + . ID=gene-PUW38_02850;Name=PUW38_02850;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_02850 CP118116.1 tRNAscan-SE tRNA 611351 611427 . + . ID=rna-PUW38_02850;Parent=gene-PUW38_02850;anticodon=(pos:611385..611387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_02850;product=tRNA-Arg CP118116.1 tRNAscan-SE exon 611351 611427 . + . ID=exon-PUW38_02850-1;Parent=rna-PUW38_02850;anticodon=(pos:611385..611387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_02850;product=tRNA-Arg CP118116.1 Genbank pseudogene 611454 611552 . - . ID=gene-PUW38_02855;Name=PUW38_02855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02855;pseudo=true CP118116.1 Protein Homology CDS 611454 611552 . - 0 ID=cds-PUW38_02855;Parent=gene-PUW38_02855;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012599930.1;locus_tag=PUW38_02855;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 611521 611914 . - . ID=gene-PUW38_02860;Name=PUW38_02860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02860;pseudo=true CP118116.1 Protein Homology CDS 611521 611914 . - 0 ID=cds-PUW38_02860;Parent=gene-PUW38_02860;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612139.1;locus_tag=PUW38_02860;product=IS3 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 611935 612188 . - . ID=gene-PUW38_02865;Name=PUW38_02865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02865;pseudo=true CP118116.1 Protein Homology CDS 611935 612188 . - 0 ID=cds-PUW38_02865;Parent=gene-PUW38_02865;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611921.1;locus_tag=PUW38_02865;product=transposase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 612575 614226 . - . ID=gene-PUW38_02870;Name=PUW38_02870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02870;pseudo=true CP118116.1 Protein Homology CDS 612575 614226 . - 0 ID=cds-PUW38_02870;Parent=gene-PUW38_02870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=PUW38_02870;product=DUF6056 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 614207 615134 . - . ID=gene-PUW38_02875;Name=PUW38_02875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02875;pseudo=true CP118116.1 Protein Homology CDS 614207 615134 . - 0 ID=cds-PUW38_02875;Parent=gene-PUW38_02875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=PUW38_02875;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 615131 615493 . - . ID=gene-PUW38_02880;Name=PUW38_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02880 CP118116.1 Protein Homology CDS 615131 615493 . - 0 ID=cds-WJG81755.1;Parent=gene-PUW38_02880;Dbxref=NCBI_GP:WJG81755.1;Name=WJG81755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=PUW38_02880;product=GtrA family protein;protein_id=WJG81755.1;transl_table=11 CP118116.1 Genbank gene 615916 616125 . - . ID=gene-PUW38_02885;Name=PUW38_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02885 CP118116.1 GeneMarkS-2+ CDS 615916 616125 . - 0 ID=cds-WJG81756.1;Parent=gene-PUW38_02885;Dbxref=NCBI_GP:WJG81756.1;Name=WJG81756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_02885;product=hypothetical protein;protein_id=WJG81756.1;transl_table=11 CP118116.1 Genbank pseudogene 616360 616734 . - . ID=gene-PUW38_02890;Name=PUW38_02890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02890;pseudo=true CP118116.1 Protein Homology CDS 616360 616734 . - 0 ID=cds-PUW38_02890;Parent=gene-PUW38_02890;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=PUW38_02890;product=ATP-binding protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 616744 616977 . + . ID=gene-PUW38_02895;Name=PUW38_02895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02895;pseudo=true CP118116.1 Protein Homology CDS 616744 616977 . + 0 ID=cds-PUW38_02895;Parent=gene-PUW38_02895;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436621.1;locus_tag=PUW38_02895;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP118116.1 Genbank gene 617028 617882 . - . ID=gene-PUW38_02900;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=PUW38_02900 CP118116.1 Protein Homology CDS 617028 617882 . - 0 ID=cds-WJG81757.1;Parent=gene-PUW38_02900;Dbxref=NCBI_GP:WJG81757.1;Name=WJG81757.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=PUW38_02900;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WJG81757.1;transl_table=11 CP118116.1 Genbank gene 618098 619423 . + . ID=gene-PUW38_02905;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=PUW38_02905 CP118116.1 Protein Homology CDS 618098 619423 . + 0 ID=cds-WJG81758.1;Parent=gene-PUW38_02905;Dbxref=NCBI_GP:WJG81758.1;Name=WJG81758.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=PUW38_02905;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WJG81758.1;transl_table=11 CP118116.1 Genbank gene 619580 619816 . + . ID=gene-PUW38_02910;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=PUW38_02910 CP118116.1 Protein Homology CDS 619580 619816 . + 0 ID=cds-WJG81759.1;Parent=gene-PUW38_02910;Dbxref=NCBI_GP:WJG81759.1;Name=WJG81759.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=PUW38_02910;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WJG81759.1;transl_table=11 CP118116.1 Genbank gene 619829 620389 . + . ID=gene-PUW38_02915;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=PUW38_02915 CP118116.1 Protein Homology CDS 619829 620389 . + 0 ID=cds-WJG81760.1;Parent=gene-PUW38_02915;Dbxref=NCBI_GP:WJG81760.1;Name=WJG81760.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=PUW38_02915;product=reactive chlorine resistance membrane protein RclC;protein_id=WJG81760.1;transl_table=11 CP118116.1 Genbank gene 620556 621731 . - . ID=gene-PUW38_02920;Name=PUW38_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02920 CP118116.1 Protein Homology CDS 620556 621731 . - 0 ID=cds-WJG81761.1;Parent=gene-PUW38_02920;Dbxref=NCBI_GP:WJG81761.1;Name=WJG81761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=PUW38_02920;product=DnaJ family molecular chaperone;protein_id=WJG81761.1;transl_table=11 CP118116.1 Genbank gene 622057 623451 . + . ID=gene-PUW38_02925;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=PUW38_02925 CP118116.1 Protein Homology CDS 622057 623451 . + 0 ID=cds-WJG81762.1;Parent=gene-PUW38_02925;Dbxref=NCBI_GP:WJG81762.1;Name=WJG81762.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=PUW38_02925;product=phenylalanine transporter;protein_id=WJG81762.1;transl_table=11 CP118116.1 Genbank gene 623493 624740 . - . ID=gene-PUW38_02930;Name=PUW38_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02930 CP118116.1 Protein Homology CDS 623493 624740 . - 0 ID=cds-WJG81763.1;Parent=gene-PUW38_02930;Dbxref=NCBI_GP:WJG81763.1;Name=WJG81763.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=PUW38_02930;product=mechanosensitive ion channel;protein_id=WJG81763.1;transl_table=11 CP118116.1 Genbank gene 625051 627021 . + . ID=gene-PUW38_02935;Name=PUW38_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02935 CP118116.1 Protein Homology CDS 625051 627021 . + 0 ID=cds-WJG81764.1;Parent=gene-PUW38_02935;Dbxref=NCBI_GP:WJG81764.1;Name=WJG81764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=PUW38_02935;product=autotransporter domain-containing protein;protein_id=WJG81764.1;transl_table=11 CP118116.1 Genbank gene 627288 627941 . - . ID=gene-PUW38_02940;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=PUW38_02940 CP118116.1 Protein Homology CDS 627288 627941 . - 0 ID=cds-WJG81765.1;Parent=gene-PUW38_02940;Dbxref=NCBI_GP:WJG81765.1;Name=WJG81765.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=PUW38_02940;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WJG81765.1;transl_table=11 CP118116.1 Genbank gene 628038 628406 . - . ID=gene-PUW38_02945;Name=PUW38_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02945 CP118116.1 Protein Homology CDS 628038 628406 . - 0 ID=cds-WJG81766.1;Parent=gene-PUW38_02945;Dbxref=NCBI_GP:WJG81766.1;Name=WJG81766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=PUW38_02945;product=MmcQ/YjbR family DNA-binding protein;protein_id=WJG81766.1;transl_table=11 CP118116.1 Genbank gene 628406 628987 . - . ID=gene-PUW38_02950;Name=PUW38_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02950 CP118116.1 Protein Homology CDS 628406 628987 . - 0 ID=cds-WJG81767.1;Parent=gene-PUW38_02950;Dbxref=NCBI_GP:WJG81767.1;Name=WJG81767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=PUW38_02950;product=TetR/AcrR family transcriptional regulator;protein_id=WJG81767.1;transl_table=11 CP118116.1 Genbank gene 629276 629617 . + . ID=gene-PUW38_02955;Name=PUW38_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02955 CP118116.1 Protein Homology CDS 629276 629617 . + 0 ID=cds-WJG81768.1;Parent=gene-PUW38_02955;Dbxref=NCBI_GP:WJG81768.1;Name=WJG81768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=PUW38_02955;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WJG81768.1;transl_table=11 CP118116.1 Genbank gene 629623 629871 . - . ID=gene-PUW38_02960;Name=PUW38_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02960 CP118116.1 Protein Homology CDS 629623 629871 . - 0 ID=cds-WJG81769.1;Parent=gene-PUW38_02960;Dbxref=NCBI_GP:WJG81769.1;Name=WJG81769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=PUW38_02960;product=DUF1158 family protein;protein_id=WJG81769.1;transl_table=11 CP118116.1 Genbank gene 629938 631056 . - . ID=gene-PUW38_02965;Name=PUW38_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02965 CP118116.1 Protein Homology CDS 629938 631056 . - 0 ID=cds-WJG81770.1;Parent=gene-PUW38_02965;Dbxref=NCBI_GP:WJG81770.1;Name=WJG81770.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=PUW38_02965;product=YbdK family carboxylate-amine ligase;protein_id=WJG81770.1;transl_table=11 CP118116.1 Genbank gene 631068 631772 . - . ID=gene-PUW38_02970;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=PUW38_02970 CP118116.1 Protein Homology CDS 631068 631772 . - 0 ID=cds-WJG81771.1;Parent=gene-PUW38_02970;Dbxref=NCBI_GP:WJG81771.1;Name=WJG81771.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=PUW38_02970;product=enterobactin synthase subunit EntD;protein_id=WJG81771.1;transl_table=11 CP118116.1 Genbank pseudogene 631818 634072 . - . ID=gene-PUW38_02975;Name=PUW38_02975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_02975;pseudo=true CP118116.1 Protein Homology CDS 631818 634072 . - 0 ID=cds-PUW38_02975;Parent=gene-PUW38_02975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=PUW38_02975;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 CP118116.1 Genbank gene 634259 635473 . + . ID=gene-PUW38_02980;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=PUW38_02980 CP118116.1 Protein Homology CDS 634259 635473 . + 0 ID=cds-WJG81772.1;Parent=gene-PUW38_02980;Dbxref=NCBI_GP:WJG81772.1;Name=WJG81772.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=PUW38_02980;product=enterochelin esterase;protein_id=WJG81772.1;transl_table=11 CP118116.1 Genbank gene 635504 635722 . + . ID=gene-PUW38_02985;Name=PUW38_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_02985 CP118116.1 Protein Homology CDS 635504 635722 . + 0 ID=cds-WJG81773.1;Parent=gene-PUW38_02985;Dbxref=NCBI_GP:WJG81773.1;Name=WJG81773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=PUW38_02985;product=MbtH family protein;protein_id=WJG81773.1;transl_table=11 CP118116.1 Genbank gene 635719 639603 . + . ID=gene-PUW38_02990;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=PUW38_02990 CP118116.1 Protein Homology CDS 635719 639603 . + 0 ID=cds-WJG81774.1;Parent=gene-PUW38_02990;Dbxref=NCBI_GP:WJG81774.1;Name=WJG81774.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=PUW38_02990;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WJG81774.1;transl_table=11 CP118116.1 Genbank gene 639853 640989 . + . ID=gene-PUW38_02995;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=PUW38_02995 CP118116.1 Protein Homology CDS 639853 640989 . + 0 ID=cds-WJG81775.1;Parent=gene-PUW38_02995;Dbxref=NCBI_GP:WJG81775.1;Name=WJG81775.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=PUW38_02995;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WJG81775.1;transl_table=11 CP118116.1 Genbank gene 641042 641836 . - . ID=gene-PUW38_03000;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=PUW38_03000 CP118116.1 Protein Homology CDS 641042 641836 . - 0 ID=cds-WJG81776.1;Parent=gene-PUW38_03000;Dbxref=NCBI_GP:WJG81776.1;Name=WJG81776.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=PUW38_03000;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WJG81776.1;transl_table=11 CP118116.1 Genbank gene 641833 642822 . - . ID=gene-PUW38_03005;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=PUW38_03005 CP118116.1 Protein Homology CDS 641833 642822 . - 0 ID=cds-WJG83150.1;Parent=gene-PUW38_03005;Dbxref=NCBI_GP:WJG83150.1;Name=WJG83150.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=PUW38_03005;product=iron-enterobactin ABC transporter permease;protein_id=WJG83150.1;transl_table=11 CP118116.1 Genbank gene 642822 643829 . - . ID=gene-PUW38_03010;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=PUW38_03010 CP118116.1 Protein Homology CDS 642822 643829 . - 0 ID=cds-WJG81777.1;Parent=gene-PUW38_03010;Dbxref=NCBI_GP:WJG81777.1;Name=WJG81777.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=PUW38_03010;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WJG81777.1;transl_table=11 CP118116.1 Genbank pseudogene 643940 645183 . + . ID=gene-PUW38_03015;Name=entS;gbkey=Gene;gene=entS;gene_biotype=pseudogene;locus_tag=PUW38_03015;pseudo=true CP118116.1 Protein Homology CDS 643940 645183 . + 0 ID=cds-PUW38_03015;Parent=gene-PUW38_03015;Note=frameshifted;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=PUW38_03015;product=enterobactin transporter EntS;pseudo=true;transl_table=11 CP118116.1 Genbank gene 645246 646202 . - . ID=gene-PUW38_03020;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=PUW38_03020 CP118116.1 Protein Homology CDS 645246 646202 . - 0 ID=cds-WJG81778.1;Parent=gene-PUW38_03020;Dbxref=NCBI_GP:WJG81778.1;Name=WJG81778.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=PUW38_03020;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WJG81778.1;transl_table=11 CP118116.1 Genbank gene 646511 647686 . + . ID=gene-PUW38_03025;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=PUW38_03025 CP118116.1 Protein Homology CDS 646511 647686 . + 0 ID=cds-WJG81779.1;Parent=gene-PUW38_03025;Dbxref=NCBI_GP:WJG81779.1;Name=WJG81779.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=PUW38_03025;product=isochorismate synthase EntC;protein_id=WJG81779.1;transl_table=11 CP118116.1 Genbank gene 647696 649279 . + . ID=gene-PUW38_03030;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=PUW38_03030 CP118116.1 Protein Homology CDS 647696 649279 . + 0 ID=cds-WJG83151.1;Parent=gene-PUW38_03030;Dbxref=NCBI_GP:WJG83151.1;Name=WJG83151.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222466.1;locus_tag=PUW38_03030;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WJG83151.1;transl_table=11 CP118116.1 Genbank gene 649320 650177 . + . ID=gene-PUW38_03035;Name=PUW38_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03035 CP118116.1 Protein Homology CDS 649320 650177 . + 0 ID=cds-WJG81780.1;Parent=gene-PUW38_03035;Dbxref=NCBI_GP:WJG81780.1;Name=WJG81780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=PUW38_03035;product=isochorismatase;protein_id=WJG81780.1;transl_table=11 CP118116.1 Genbank gene 650177 650932 . + . ID=gene-PUW38_03040;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=PUW38_03040 CP118116.1 Protein Homology CDS 650177 650932 . + 0 ID=cds-WJG81781.1;Parent=gene-PUW38_03040;Dbxref=NCBI_GP:WJG81781.1;Name=WJG81781.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=PUW38_03040;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WJG81781.1;transl_table=11 CP118116.1 Genbank gene 650935 651348 . + . ID=gene-PUW38_03045;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=PUW38_03045 CP118116.1 Protein Homology CDS 650935 651348 . + 0 ID=cds-WJG81782.1;Parent=gene-PUW38_03045;Dbxref=NCBI_GP:WJG81782.1;Name=WJG81782.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=PUW38_03045;product=proofreading thioesterase EntH;protein_id=WJG81782.1;transl_table=11 CP118116.1 Genbank gene 651530 653635 . + . ID=gene-PUW38_03050;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=PUW38_03050 CP118116.1 Protein Homology CDS 651530 653635 . + 0 ID=cds-WJG81783.1;Parent=gene-PUW38_03050;Dbxref=NCBI_GP:WJG81783.1;Name=WJG81783.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=PUW38_03050;product=pyruvate/proton symporter CstA;protein_id=WJG81783.1;transl_table=11 CP118116.1 Genbank gene 653699 653896 . + . ID=gene-PUW38_03055;Name=PUW38_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03055 CP118116.1 Protein Homology CDS 653699 653896 . + 0 ID=cds-WJG81784.1;Parent=gene-PUW38_03055;Dbxref=NCBI_GP:WJG81784.1;Name=WJG81784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=PUW38_03055;product=YbdD/YjiX family protein;protein_id=WJG81784.1;transl_table=11 CP118116.1 Genbank gene 653932 655020 . - . ID=gene-PUW38_03060;Name=PUW38_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03060 CP118116.1 Protein Homology CDS 653932 655020 . - 0 ID=cds-WJG81785.1;Parent=gene-PUW38_03060;Dbxref=NCBI_GP:WJG81785.1;Name=WJG81785.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=PUW38_03060;product=oxidoreductase;protein_id=WJG81785.1;transl_table=11 CP118116.1 Genbank pseudogene 655147 656306 . + . ID=gene-PUW38_03065;Name=PUW38_03065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_03065;pseudo=true CP118116.1 Protein Homology CDS 655147 656306 . + 0 ID=cds-PUW38_03065;Parent=gene-PUW38_03065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=PUW38_03065;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 656307 656924 . - . ID=gene-PUW38_03070;Name=PUW38_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03070 CP118116.1 Protein Homology CDS 656307 656924 . - 0 ID=cds-WJG81786.1;Parent=gene-PUW38_03070;Dbxref=NCBI_GP:WJG81786.1;Name=WJG81786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=PUW38_03070;product=ParB/RepB/Spo0J family partition protein;protein_id=WJG81786.1;transl_table=11 CP118116.1 Genbank gene 656897 658132 . - . ID=gene-PUW38_03075;Name=PUW38_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03075 CP118116.1 Protein Homology CDS 656897 658132 . - 0 ID=cds-WJG81787.1;Parent=gene-PUW38_03075;Dbxref=NCBI_GP:WJG81787.1;Name=WJG81787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=PUW38_03075;product=phosphoadenosine phosphosulfate reductase;protein_id=WJG81787.1;transl_table=11 CP118116.1 Genbank gene 658298 659200 . - . ID=gene-PUW38_03080;Name=PUW38_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03080 CP118116.1 Protein Homology CDS 658298 659200 . - 0 ID=cds-WJG81788.1;Parent=gene-PUW38_03080;Dbxref=NCBI_GP:WJG81788.1;Name=WJG81788.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=PUW38_03080;product=LysR family transcriptional regulator;protein_id=WJG81788.1;transl_table=11 CP118116.1 Genbank gene 659517 660263 . - . ID=gene-PUW38_03085;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=PUW38_03085 CP118116.1 Protein Homology CDS 659517 660263 . - 0 ID=cds-WJG81789.1;Parent=gene-PUW38_03085;Dbxref=NCBI_GP:WJG81789.1;Name=WJG81789.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=PUW38_03085;product=thiol:disulfide interchange protein DsbG;protein_id=WJG81789.1;transl_table=11 CP118116.1 Genbank gene 660704 661267 . + . ID=gene-PUW38_03090;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=PUW38_03090 CP118116.1 Protein Homology CDS 660704 661267 . + 0 ID=cds-WJG81790.1;Parent=gene-PUW38_03090;Dbxref=NCBI_GP:WJG81790.1;Name=WJG81790.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=PUW38_03090;product=alkyl hydroperoxide reductase subunit C;protein_id=WJG81790.1;transl_table=11 CP118116.1 Genbank gene 661509 663074 . + . ID=gene-PUW38_03095;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=PUW38_03095 CP118116.1 Protein Homology CDS 661509 663074 . + 0 ID=cds-WJG81791.1;Parent=gene-PUW38_03095;Dbxref=NCBI_GP:WJG81791.1;Name=WJG81791.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=PUW38_03095;product=alkyl hydroperoxide reductase subunit F;protein_id=WJG81791.1;transl_table=11 CP118116.1 Genbank gene 663407 663967 . + . ID=gene-PUW38_03100;Name=PUW38_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03100 CP118116.1 Protein Homology CDS 663407 663967 . + 0 ID=cds-WJG81792.1;Parent=gene-PUW38_03100;Dbxref=NCBI_GP:WJG81792.1;Name=WJG81792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=PUW38_03100;product=molecular chaperone;protein_id=WJG81792.1;transl_table=11 CP118116.1 Genbank gene 663960 666239 . + . ID=gene-PUW38_03105;Name=PUW38_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03105 CP118116.1 Protein Homology CDS 663960 666239 . + 0 ID=cds-WJG81793.1;Parent=gene-PUW38_03105;Dbxref=NCBI_GP:WJG81793.1;Name=WJG81793.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=PUW38_03105;product=molybdopterin-dependent oxidoreductase;protein_id=WJG81793.1;transl_table=11 CP118116.1 Genbank gene 666236 666793 . + . ID=gene-PUW38_03110;Name=PUW38_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03110 CP118116.1 Protein Homology CDS 666236 666793 . + 0 ID=cds-WJG81794.1;Parent=gene-PUW38_03110;Dbxref=NCBI_GP:WJG81794.1;Name=WJG81794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=PUW38_03110;product=4Fe-4S dicluster domain-containing protein;protein_id=WJG81794.1;transl_table=11 CP118116.1 Genbank pseudogene 666793 667559 . + . ID=gene-PUW38_03115;Name=PUW38_03115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_03115;pseudo=true CP118116.1 Protein Homology CDS 666793 667559 . + 0 ID=cds-PUW38_03115;Parent=gene-PUW38_03115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=PUW38_03115;product=dimethyl sulfoxide reductase anchor subunit family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 667627 668055 . - . ID=gene-PUW38_03120;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=PUW38_03120 CP118116.1 Protein Homology CDS 667627 668055 . - 0 ID=cds-WJG81795.1;Parent=gene-PUW38_03120;Dbxref=NCBI_GP:WJG81795.1;Name=WJG81795.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=PUW38_03120;product=universal stress protein UspG;protein_id=WJG81795.1;transl_table=11 CP118116.1 Genbank gene 668278 669525 . + . ID=gene-PUW38_03125;Name=PUW38_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03125 CP118116.1 Protein Homology CDS 668278 669525 . + 0 ID=cds-WJG81796.1;Parent=gene-PUW38_03125;Dbxref=NCBI_GP:WJG81796.1;Name=WJG81796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=PUW38_03125;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WJG81796.1;transl_table=11 CP118116.1 Genbank gene 669608 670018 . - . ID=gene-PUW38_03130;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=PUW38_03130 CP118116.1 Protein Homology CDS 669608 670018 . - 0 ID=cds-WJG81797.1;Parent=gene-PUW38_03130;Dbxref=NCBI_GP:WJG81797.1;Name=WJG81797.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=PUW38_03130;product=nucleoside diphosphate kinase regulator;protein_id=WJG81797.1;transl_table=11 CP118116.1 Genbank gene 670253 671059 . - . ID=gene-PUW38_03135;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=PUW38_03135 CP118116.1 Protein Homology CDS 670253 671059 . - 0 ID=cds-WJG81798.1;Parent=gene-PUW38_03135;Dbxref=NCBI_GP:WJG81798.1;Name=WJG81798.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=PUW38_03135;product=ribonuclease I;protein_id=WJG81798.1;transl_table=11 CP118116.1 Genbank gene 671169 672632 . - . ID=gene-PUW38_03140;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=PUW38_03140 CP118116.1 Protein Homology CDS 671169 672632 . - 0 ID=cds-WJG81799.1;Parent=gene-PUW38_03140;Dbxref=NCBI_GP:WJG81799.1;Name=WJG81799.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=PUW38_03140;product=citrate/succinate antiporter CitT;protein_id=WJG81799.1;transl_table=11 CP118116.1 Genbank gene 672691 673566 . - . ID=gene-PUW38_03145;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PUW38_03145 CP118116.1 Protein Homology CDS 672691 673566 . - 0 ID=cds-WJG81800.1;Parent=gene-PUW38_03145;Dbxref=NCBI_GP:WJG81800.1;Name=WJG81800.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=PUW38_03145;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WJG81800.1;transl_table=11 CP118116.1 Genbank gene 673538 674089 . - . ID=gene-PUW38_03150;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PUW38_03150 CP118116.1 Protein Homology CDS 673538 674089 . - 0 ID=cds-WJG81801.1;Parent=gene-PUW38_03150;Dbxref=NCBI_GP:WJG81801.1;Name=WJG81801.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=PUW38_03150;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WJG81801.1;transl_table=11 CP118116.1 Genbank gene 674093 675622 . - . ID=gene-PUW38_03155;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PUW38_03155 CP118116.1 Protein Homology CDS 674093 675622 . - 0 ID=cds-WJG81802.1;Parent=gene-PUW38_03155;Dbxref=NCBI_GP:WJG81802.1;Name=WJG81802.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=PUW38_03155;product=citrate lyase subunit alpha;protein_id=WJG81802.1;transl_table=11 CP118116.1 Genbank gene 675632 676540 . - . ID=gene-PUW38_03160;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PUW38_03160 CP118116.1 Protein Homology CDS 675632 676540 . - 0 ID=cds-WJG81803.1;Parent=gene-PUW38_03160;Dbxref=NCBI_GP:WJG81803.1;Name=WJG81803.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=PUW38_03160;product=citrate (pro-3S)-lyase subunit beta;protein_id=WJG81803.1;transl_table=11 CP118116.1 Genbank gene 676537 676833 . - . ID=gene-PUW38_03165;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PUW38_03165 CP118116.1 Protein Homology CDS 676537 676833 . - 0 ID=cds-WJG81804.1;Parent=gene-PUW38_03165;Dbxref=NCBI_GP:WJG81804.1;Name=WJG81804.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=PUW38_03165;product=citrate lyase acyl carrier protein;protein_id=WJG81804.1;transl_table=11 CP118116.1 Genbank gene 676830 677906 . - . ID=gene-PUW38_03170;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PUW38_03170 CP118116.1 Protein Homology CDS 676830 677906 . - 0 ID=cds-WJG81805.1;Parent=gene-PUW38_03170;Dbxref=NCBI_GP:WJG81805.1;Name=WJG81805.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=PUW38_03170;product=[citrate (pro-3S)-lyase] ligase;protein_id=WJG81805.1;transl_table=11 CP118116.1 Genbank pseudogene 678291 679951 . + . ID=gene-PUW38_03175;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=pseudogene;locus_tag=PUW38_03175;pseudo=true CP118116.1 Protein Homology CDS 678291 679951 . + 0 ID=cds-PUW38_03175;Parent=gene-PUW38_03175;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=PUW38_03175;product=sensor histidine kinase DpiB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 679920 680600 . + . ID=gene-PUW38_03180;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=PUW38_03180 CP118116.1 Protein Homology CDS 679920 680600 . + 0 ID=cds-WJG81806.1;Parent=gene-PUW38_03180;Dbxref=NCBI_GP:WJG81806.1;Name=WJG81806.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=PUW38_03180;product=two-component response regulator DpiA;protein_id=WJG81806.1;transl_table=11 CP118116.1 Genbank gene 680654 682039 . - . ID=gene-PUW38_03185;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=PUW38_03185 CP118116.1 Protein Homology CDS 680654 682039 . - 0 ID=cds-WJG81807.1;Parent=gene-PUW38_03185;Dbxref=NCBI_GP:WJG81807.1;Name=WJG81807.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=PUW38_03185;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WJG81807.1;transl_table=11 CP118116.1 Genbank gene 682418 682990 . + . ID=gene-PUW38_03190;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=PUW38_03190 CP118116.1 Protein Homology CDS 682418 682990 . + 0 ID=cds-WJG83152.1;Parent=gene-PUW38_03190;Dbxref=NCBI_GP:WJG83152.1;Name=WJG83152.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=PUW38_03190;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WJG83152.1;transl_table=11 CP118116.1 Genbank gene 683178 683387 . + . ID=gene-PUW38_03195;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PUW38_03195 CP118116.1 Protein Homology CDS 683178 683387 . + 0 ID=cds-WJG81808.1;Parent=gene-PUW38_03195;Dbxref=NCBI_GP:WJG81808.1;Name=WJG81808.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=PUW38_03195;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WJG81808.1;transl_table=11 CP118116.1 Genbank gene 683444 683827 . - . ID=gene-PUW38_03200;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=PUW38_03200 CP118116.1 Protein Homology CDS 683444 683827 . - 0 ID=cds-WJG81809.1;Parent=gene-PUW38_03200;Dbxref=NCBI_GP:WJG81809.1;Name=WJG81809.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=PUW38_03200;product=fluoride efflux transporter CrcB;protein_id=WJG81809.1;transl_table=11 CP118116.1 Genbank gene 683918 684706 . + . ID=gene-PUW38_03205;Name=PUW38_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03205 CP118116.1 Protein Homology CDS 683918 684706 . + 0 ID=cds-WJG81810.1;Parent=gene-PUW38_03205;Dbxref=NCBI_GP:WJG81810.1;Name=WJG81810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=PUW38_03205;product=deaminated glutathione amidase;protein_id=WJG81810.1;transl_table=11 CP118116.1 Genbank gene 684835 685038 . + . ID=gene-PUW38_03210;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=PUW38_03210 CP118116.1 Protein Homology CDS 684835 685038 . + 0 ID=cds-WJG81811.1;Parent=gene-PUW38_03210;Dbxref=NCBI_GP:WJG81811.1;Name=WJG81811.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=PUW38_03210;product=twin-arginine translocase subunit TatE;protein_id=WJG81811.1;transl_table=11 CP118116.1 Genbank gene 685123 686088 . - . ID=gene-PUW38_03215;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=PUW38_03215 CP118116.1 Protein Homology CDS 685123 686088 . - 0 ID=cds-WJG81812.1;Parent=gene-PUW38_03215;Dbxref=NCBI_GP:WJG81812.1;Name=WJG81812.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=PUW38_03215;product=lipoyl synthase;protein_id=WJG81812.1;transl_table=11 CP118116.1 Genbank gene 686294 687247 . - . ID=gene-PUW38_03220;Name=PUW38_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03220 CP118116.1 Protein Homology CDS 686294 687247 . - 0 ID=cds-WJG81813.1;Parent=gene-PUW38_03220;Dbxref=NCBI_GP:WJG81813.1;Name=WJG81813.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=PUW38_03220;product=YbeF family transcriptional regulator;protein_id=WJG81813.1;transl_table=11 CP118116.1 Genbank gene 687549 688190 . - . ID=gene-PUW38_03225;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=PUW38_03225 CP118116.1 Protein Homology CDS 687549 688190 . - 0 ID=cds-WJG81814.1;Parent=gene-PUW38_03225;Dbxref=NCBI_GP:WJG81814.1;Name=WJG81814.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=PUW38_03225;product=lipoyl(octanoyl) transferase LipB;protein_id=WJG81814.1;transl_table=11 CP118116.1 Genbank gene 688290 688553 . - . ID=gene-PUW38_03230;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=PUW38_03230 CP118116.1 Protein Homology CDS 688290 688553 . - 0 ID=cds-WJG81815.1;Parent=gene-PUW38_03230;Dbxref=NCBI_GP:WJG81815.1;Name=WJG81815.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=PUW38_03230;product=DUF493 family protein YbeD;protein_id=WJG81815.1;transl_table=11 CP118116.1 Genbank gene 688660 689871 . - . ID=gene-PUW38_03235;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=PUW38_03235 CP118116.1 Protein Homology CDS 688660 689871 . - 0 ID=cds-WJG81816.1;Parent=gene-PUW38_03235;Dbxref=NCBI_GP:WJG81816.1;Name=WJG81816.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=PUW38_03235;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WJG81816.1;transl_table=11 CP118116.1 Genbank gene 690011 691144 . - . ID=gene-PUW38_03240;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=PUW38_03240 CP118116.1 Protein Homology CDS 690011 691144 . - 0 ID=cds-WJG81817.1;Parent=gene-PUW38_03240;Dbxref=NCBI_GP:WJG81817.1;Name=WJG81817.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=PUW38_03240;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WJG81817.1;transl_table=11 CP118116.1 Genbank pseudogene 691155 692266 . - . ID=gene-PUW38_03245;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=pseudogene;gene_synonym=rodA;locus_tag=PUW38_03245;pseudo=true CP118116.1 Protein Homology CDS 691155 692266 . - 0 ID=cds-PUW38_03245;Parent=gene-PUW38_03245;Note=rod shape-determining protein RodA%3B frameshifted;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=PUW38_03245;product=peptidoglycan glycosyltransferase MrdB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 692269 694170 . - . ID=gene-PUW38_03250;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=PUW38_03250 CP118116.1 Protein Homology CDS 692269 694170 . - 0 ID=cds-WJG81818.1;Parent=gene-PUW38_03250;Dbxref=NCBI_GP:WJG81818.1;Name=WJG81818.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=PUW38_03250;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WJG81818.1;transl_table=11 CP118116.1 Genbank gene 694201 694668 . - . ID=gene-PUW38_03255;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=PUW38_03255 CP118116.1 Protein Homology CDS 694201 694668 . - 0 ID=cds-WJG81819.1;Parent=gene-PUW38_03255;Dbxref=NCBI_GP:WJG81819.1;Name=WJG81819.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=PUW38_03255;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WJG81819.1;transl_table=11 CP118116.1 Genbank gene 694672 694989 . - . ID=gene-PUW38_03260;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=PUW38_03260 CP118116.1 Protein Homology CDS 694672 694989 . - 0 ID=cds-WJG81820.1;Parent=gene-PUW38_03260;Dbxref=NCBI_GP:WJG81820.1;Name=WJG81820.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=PUW38_03260;product=ribosome silencing factor;protein_id=WJG81820.1;transl_table=11 CP118116.1 Genbank gene 695318 695926 . - . ID=gene-PUW38_03265;Name=PUW38_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03265 CP118116.1 Protein Homology CDS 695318 695926 . - 0 ID=cds-WJG81821.1;Parent=gene-PUW38_03265;Dbxref=NCBI_GP:WJG81821.1;Name=WJG81821.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=PUW38_03265;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WJG81821.1;transl_table=11 CP118116.1 Genbank pseudogene 696023 697117 . + . ID=gene-PUW38_03270;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=pseudogene;locus_tag=PUW38_03270;pseudo=true CP118116.1 Protein Homology CDS 696023 697117 . + 0 ID=cds-PUW38_03270;Parent=gene-PUW38_03270;Note=internal stop;Ontology_term=GO:0009236,GO:0048472,GO:0005737;gbkey=CDS;gene=cobD;go_component=cytoplasm|0005737||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=PUW38_03270;product=threonine-phosphate decarboxylase CobD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 697092 697733 . - . ID=gene-PUW38_03275;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=PUW38_03275 CP118116.1 Protein Homology CDS 697092 697733 . - 0 ID=cds-WJG83153.1;Parent=gene-PUW38_03275;Dbxref=NCBI_GP:WJG83153.1;Name=WJG83153.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=PUW38_03275;product=nicotinate-nucleotide adenylyltransferase;protein_id=WJG83153.1;transl_table=11 CP118116.1 Genbank gene 697735 698766 . - . ID=gene-PUW38_03280;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=PUW38_03280 CP118116.1 Protein Homology CDS 697735 698766 . - 0 ID=cds-WJG81822.1;Parent=gene-PUW38_03280;Dbxref=NCBI_GP:WJG81822.1;Name=WJG81822.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=PUW38_03280;product=DNA polymerase III subunit delta;protein_id=WJG81822.1;transl_table=11 CP118116.1 Genbank gene 698766 699356 . - . ID=gene-PUW38_03285;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=PUW38_03285 CP118116.1 Protein Homology CDS 698766 699356 . - 0 ID=cds-WJG81823.1;Parent=gene-PUW38_03285;Dbxref=NCBI_GP:WJG81823.1;Name=WJG81823.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=PUW38_03285;product=LPS assembly lipoprotein LptE;protein_id=WJG81823.1;transl_table=11 CP118116.1 Genbank gene 699371 701953 . - . ID=gene-PUW38_03290;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=PUW38_03290 CP118116.1 Protein Homology CDS 699371 701953 . - 0 ID=cds-WJG81824.1;Parent=gene-PUW38_03290;Dbxref=NCBI_GP:WJG81824.1;Name=WJG81824.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=PUW38_03290;product=leucine--tRNA ligase;protein_id=WJG81824.1;transl_table=11 CP118116.1 Genbank pseudogene 702190 702530 . + . ID=gene-PUW38_03295;Name=PUW38_03295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_03295;pseudo=true CP118116.1 Protein Homology CDS 702190 702530 . + 0 ID=cds-PUW38_03295;Parent=gene-PUW38_03295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=PUW38_03295;product=UxaA family hydrolase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 702547 703719 . + . ID=gene-PUW38_03300;Name=PUW38_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03300 CP118116.1 Protein Homology CDS 702547 703719 . + 0 ID=cds-WJG81825.1;Parent=gene-PUW38_03300;Dbxref=NCBI_GP:WJG81825.1;Name=WJG81825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=PUW38_03300;product=UxaA family hydrolase;protein_id=WJG81825.1;transl_table=11 CP118116.1 Genbank gene 703769 704722 . + . ID=gene-PUW38_03305;Name=PUW38_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03305 CP118116.1 Protein Homology CDS 703769 704722 . + 0 ID=cds-WJG81826.1;Parent=gene-PUW38_03305;Dbxref=NCBI_GP:WJG81826.1;Name=WJG81826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=PUW38_03305;product=2-keto-3-deoxygluconate permease 2;protein_id=WJG81826.1;transl_table=11 CP118116.1 Genbank pseudogene 704790 706718 . + . ID=gene-PUW38_03310;Name=PUW38_03310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_03310;pseudo=true CP118116.1 Protein Homology CDS 704790 706718 . + 0 ID=cds-PUW38_03310;Parent=gene-PUW38_03310;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=PUW38_03310;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 706811 707284 . + . ID=gene-PUW38_03315;Name=PUW38_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03315 CP118116.1 Protein Homology CDS 706811 707284 . + 0 ID=cds-WJG81827.1;Parent=gene-PUW38_03315;Dbxref=NCBI_GP:WJG81827.1;Name=WJG81827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=PUW38_03315;product=zinc ribbon-containing protein;protein_id=WJG81827.1;transl_table=11 CP118116.1 Genbank gene 707323 708258 . - . ID=gene-PUW38_03320;Name=PUW38_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03320 CP118116.1 Protein Homology CDS 707323 708258 . - 0 ID=cds-WJG83154.1;Parent=gene-PUW38_03320;Dbxref=NCBI_GP:WJG83154.1;Name=WJG83154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=PUW38_03320;product=tetratricopeptide repeat protein;protein_id=WJG83154.1;transl_table=11 CP118116.1 Genbank gene 708443 709150 . + . ID=gene-PUW38_03325;Name=PUW38_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03325 CP118116.1 Protein Homology CDS 708443 709150 . + 0 ID=cds-WJG81828.1;Parent=gene-PUW38_03325;Dbxref=NCBI_GP:WJG81828.1;Name=WJG81828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=PUW38_03325;product=DUF1266 domain-containing protein;protein_id=WJG81828.1;transl_table=11 CP118116.1 Genbank gene 709147 710580 . + . ID=gene-PUW38_03330;Name=PUW38_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03330 CP118116.1 Protein Homology CDS 709147 710580 . + 0 ID=cds-WJG81829.1;Parent=gene-PUW38_03330;Dbxref=NCBI_GP:WJG81829.1;Name=WJG81829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=PUW38_03330;product=J domain-containing protein;protein_id=WJG81829.1;transl_table=11 CP118116.1 Genbank gene 710592 711287 . + . ID=gene-PUW38_03335;Name=PUW38_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03335 CP118116.1 Protein Homology CDS 710592 711287 . + 0 ID=cds-WJG81830.1;Parent=gene-PUW38_03335;Dbxref=NCBI_GP:WJG81830.1;Name=WJG81830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=PUW38_03335;product=DUF1266 domain-containing protein;protein_id=WJG81830.1;transl_table=11 CP118116.1 Genbank gene 711284 712756 . + . ID=gene-PUW38_03340;Name=PUW38_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03340 CP118116.1 Protein Homology CDS 711284 712756 . + 0 ID=cds-WJG81831.1;Parent=gene-PUW38_03340;Dbxref=NCBI_GP:WJG81831.1;Name=WJG81831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=PUW38_03340;product=J domain-containing protein;protein_id=WJG81831.1;transl_table=11 CP118116.1 Genbank gene 712778 714457 . - . ID=gene-PUW38_03345;Name=PUW38_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03345 CP118116.1 Protein Homology CDS 712778 714457 . - 0 ID=cds-WJG81832.1;Parent=gene-PUW38_03345;Dbxref=NCBI_GP:WJG81832.1;Name=WJG81832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=PUW38_03345;product=molecular chaperone HscC;protein_id=WJG81832.1;transl_table=11 CP118116.1 Genbank gene 714533 715771 . - . ID=gene-PUW38_03350;Name=PUW38_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03350 CP118116.1 Protein Homology CDS 714533 715771 . - 0 ID=cds-WJG81833.1;Parent=gene-PUW38_03350;Dbxref=NCBI_GP:WJG81833.1;Name=WJG81833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=PUW38_03350;product=hypothetical protein;protein_id=WJG81833.1;transl_table=11 CP118116.1 Genbank gene 715803 716738 . - . ID=gene-PUW38_03355;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=PUW38_03355 CP118116.1 Protein Homology CDS 715803 716738 . - 0 ID=cds-WJG81834.1;Parent=gene-PUW38_03355;Dbxref=NCBI_GP:WJG81834.1;Name=WJG81834.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=PUW38_03355;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WJG81834.1;transl_table=11 CP118116.1 Genbank gene 716855 717580 . - . ID=gene-PUW38_03360;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=PUW38_03360 CP118116.1 Protein Homology CDS 716855 717580 . - 0 ID=cds-WJG81835.1;Parent=gene-PUW38_03360;Dbxref=NCBI_GP:WJG81835.1;Name=WJG81835.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=PUW38_03360;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WJG81835.1;transl_table=11 CP118116.1 Genbank gene 717580 718254 . - . ID=gene-PUW38_03365;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=PUW38_03365 CP118116.1 Protein Homology CDS 717580 718254 . - 0 ID=cds-WJG81836.1;Parent=gene-PUW38_03365;Dbxref=NCBI_GP:WJG81836.1;Name=WJG81836.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=PUW38_03365;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WJG81836.1;transl_table=11 CP118116.1 Genbank gene 718254 718994 . - . ID=gene-PUW38_03370;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=PUW38_03370 CP118116.1 Protein Homology CDS 718254 718994 . - 0 ID=cds-WJG81837.1;Parent=gene-PUW38_03370;Dbxref=NCBI_GP:WJG81837.1;Name=WJG81837.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=PUW38_03370;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WJG81837.1;transl_table=11 CP118116.1 Genbank pseudogene 719154 720062 . - . ID=gene-PUW38_03375;Name=PUW38_03375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_03375;pseudo=true CP118116.1 Protein Homology CDS 719154 720062 . - 0 ID=cds-PUW38_03375;Parent=gene-PUW38_03375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=PUW38_03375;product=amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 720417 721954 . - . ID=gene-PUW38_03380;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=pseudogene;locus_tag=PUW38_03380;pseudo=true CP118116.1 Protein Homology CDS 720417 721954 . - 0 ID=cds-PUW38_03380;Parent=gene-PUW38_03380;Note=frameshifted;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=PUW38_03380;product=apolipoprotein N-acyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 721974 722852 . - . ID=gene-PUW38_03385;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=PUW38_03385 CP118116.1 Protein Homology CDS 721974 722852 . - 0 ID=cds-WJG81838.1;Parent=gene-PUW38_03385;Dbxref=NCBI_GP:WJG81838.1;Name=WJG81838.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=PUW38_03385;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WJG81838.1;transl_table=11 CP118116.1 Genbank gene 723010 723483 . - . ID=gene-PUW38_03390;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=PUW38_03390 CP118116.1 Protein Homology CDS 723010 723483 . - 0 ID=cds-WJG81839.1;Parent=gene-PUW38_03390;Dbxref=NCBI_GP:WJG81839.1;Name=WJG81839.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=PUW38_03390;product=rRNA maturation RNase YbeY;protein_id=WJG81839.1;transl_table=11 CP118116.1 Genbank gene 723480 724526 . - . ID=gene-PUW38_03395;Name=PUW38_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03395 CP118116.1 Protein Homology CDS 723480 724526 . - 0 ID=cds-WJG81840.1;Parent=gene-PUW38_03395;Dbxref=NCBI_GP:WJG81840.1;Name=WJG81840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=PUW38_03395;product=PhoH family protein;protein_id=WJG81840.1;transl_table=11 CP118116.1 Genbank gene 724731 726155 . - . ID=gene-PUW38_03400;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=PUW38_03400 CP118116.1 Protein Homology CDS 724731 726155 . - 0 ID=cds-WJG81841.1;Parent=gene-PUW38_03400;Dbxref=NCBI_GP:WJG81841.1;Name=WJG81841.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=PUW38_03400;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WJG81841.1;transl_table=11 CP118116.1 Genbank gene 726299 727474 . + . ID=gene-PUW38_03405;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=PUW38_03405 CP118116.1 Protein Homology CDS 726299 727474 . + 0 ID=cds-WJG81842.1;Parent=gene-PUW38_03405;Dbxref=NCBI_GP:WJG81842.1;Name=WJG81842.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=PUW38_03405;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WJG81842.1;transl_table=11 CP118116.1 Genbank gene 727541 728116 . - . ID=gene-PUW38_03410;Name=PUW38_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03410 CP118116.1 Protein Homology CDS 727541 728116 . - 0 ID=cds-WJG81843.1;Parent=gene-PUW38_03410;Dbxref=NCBI_GP:WJG81843.1;Name=WJG81843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=PUW38_03410;product=hypothetical protein;protein_id=WJG81843.1;transl_table=11 CP118116.1 Genbank gene 728252 728326 . - . ID=gene-PUW38_03415;Name=PUW38_03415;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_03415 CP118116.1 tRNAscan-SE tRNA 728252 728326 . - . ID=rna-PUW38_03415;Parent=gene-PUW38_03415;anticodon=(pos:complement(728292..728294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03415;product=tRNA-Gln CP118116.1 tRNAscan-SE exon 728252 728326 . - . ID=exon-PUW38_03415-1;Parent=rna-PUW38_03415;anticodon=(pos:complement(728292..728294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03415;product=tRNA-Gln CP118116.1 Genbank gene 728370 728444 . - . ID=gene-PUW38_03420;Name=PUW38_03420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_03420 CP118116.1 tRNAscan-SE tRNA 728370 728444 . - . ID=rna-PUW38_03420;Parent=gene-PUW38_03420;anticodon=(pos:complement(728410..728412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03420;product=tRNA-Gln CP118116.1 tRNAscan-SE exon 728370 728444 . - . ID=exon-PUW38_03420-1;Parent=rna-PUW38_03420;anticodon=(pos:complement(728410..728412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03420;product=tRNA-Gln CP118116.1 Genbank gene 728493 728566 . - . ID=gene-PUW38_03425;Name=PUW38_03425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_03425 CP118116.1 tRNAscan-SE tRNA 728493 728566 . - . ID=rna-PUW38_03425;Parent=gene-PUW38_03425;anticodon=(pos:complement(728530..728532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03425;product=tRNA-Met CP118116.1 tRNAscan-SE exon 728493 728566 . - . ID=exon-PUW38_03425-1;Parent=rna-PUW38_03425;anticodon=(pos:complement(728530..728532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03425;product=tRNA-Met CP118116.1 Genbank gene 728582 728656 . - . ID=gene-PUW38_03430;Name=PUW38_03430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_03430 CP118116.1 tRNAscan-SE tRNA 728582 728656 . - . ID=rna-PUW38_03430;Parent=gene-PUW38_03430;anticodon=(pos:complement(728622..728624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03430;product=tRNA-Gln CP118116.1 tRNAscan-SE exon 728582 728656 . - . ID=exon-PUW38_03430-1;Parent=rna-PUW38_03430;anticodon=(pos:complement(728622..728624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03430;product=tRNA-Gln CP118116.1 Genbank gene 728680 728764 . - . ID=gene-PUW38_03435;Name=PUW38_03435;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_03435 CP118116.1 tRNAscan-SE tRNA 728680 728764 . - . ID=rna-PUW38_03435;Parent=gene-PUW38_03435;anticodon=(pos:complement(728728..728730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03435;product=tRNA-Leu CP118116.1 tRNAscan-SE exon 728680 728764 . - . ID=exon-PUW38_03435-1;Parent=rna-PUW38_03435;anticodon=(pos:complement(728728..728730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03435;product=tRNA-Leu CP118116.1 Genbank gene 728773 728849 . - . ID=gene-PUW38_03440;Name=PUW38_03440;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_03440 CP118116.1 tRNAscan-SE tRNA 728773 728849 . - . ID=rna-PUW38_03440;Parent=gene-PUW38_03440;anticodon=(pos:complement(728813..728815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03440;product=tRNA-Met CP118116.1 tRNAscan-SE exon 728773 728849 . - . ID=exon-PUW38_03440-1;Parent=rna-PUW38_03440;anticodon=(pos:complement(728813..728815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03440;product=tRNA-Met CP118116.1 Genbank gene 729071 730735 . - . ID=gene-PUW38_03445;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=PUW38_03445 CP118116.1 Protein Homology CDS 729071 730735 . - 0 ID=cds-WJG81844.1;Parent=gene-PUW38_03445;Dbxref=NCBI_GP:WJG81844.1;Name=WJG81844.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=PUW38_03445;product=asparagine synthase B;protein_id=WJG81844.1;transl_table=11 CP118116.1 Genbank gene 731025 731777 . - . ID=gene-PUW38_03450;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=PUW38_03450 CP118116.1 Protein Homology CDS 731025 731777 . - 0 ID=cds-WJG81845.1;Parent=gene-PUW38_03450;Dbxref=NCBI_GP:WJG81845.1;Name=WJG81845.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=PUW38_03450;product=ribonucleotide monophosphatase NagD;protein_id=WJG81845.1;transl_table=11 CP118116.1 Genbank gene 731824 733044 . - . ID=gene-PUW38_03455;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=PUW38_03455 CP118116.1 Protein Homology CDS 731824 733044 . - 0 ID=cds-WJG81846.1;Parent=gene-PUW38_03455;Dbxref=NCBI_GP:WJG81846.1;Name=WJG81846.1;gbkey=CDS;gene=nagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=PUW38_03455;product=DNA-binding transcriptional regulator NagC;protein_id=WJG81846.1;transl_table=11 CP118116.1 Genbank gene 733049 734203 . - . ID=gene-PUW38_03460;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PUW38_03460 CP118116.1 Protein Homology CDS 733049 734203 . - 0 ID=cds-WJG81847.1;Parent=gene-PUW38_03460;Dbxref=NCBI_GP:WJG81847.1;Name=WJG81847.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=PUW38_03460;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WJG81847.1;transl_table=11 CP118116.1 Genbank gene 734262 735062 . - . ID=gene-PUW38_03465;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=PUW38_03465 CP118116.1 Protein Homology CDS 734262 735062 . - 0 ID=cds-WJG81848.1;Parent=gene-PUW38_03465;Dbxref=NCBI_GP:WJG81848.1;Name=WJG81848.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=PUW38_03465;product=glucosamine-6-phosphate deaminase;protein_id=WJG81848.1;transl_table=11 CP118116.1 Genbank gene 735388 737340 . + . ID=gene-PUW38_03470;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=PUW38_03470 CP118116.1 Protein Homology CDS 735388 737340 . + 0 ID=cds-WJG81849.1;Parent=gene-PUW38_03470;Dbxref=NCBI_GP:WJG81849.1;Name=WJG81849.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=PUW38_03470;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WJG81849.1;transl_table=11 CP118116.1 Genbank gene 737551 739218 . + . ID=gene-PUW38_03475;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=PUW38_03475 CP118116.1 Protein Homology CDS 737551 739218 . + 0 ID=cds-WJG81850.1;Parent=gene-PUW38_03475;Dbxref=NCBI_GP:WJG81850.1;Name=WJG81850.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=PUW38_03475;product=glutamine--tRNA ligase;protein_id=WJG81850.1;transl_table=11 CP118116.1 Genbank gene 739879 741285 . + . ID=gene-PUW38_03480;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=PUW38_03480 CP118116.1 Protein Homology CDS 739879 741285 . + 0 ID=cds-WJG81851.1;Parent=gene-PUW38_03480;Dbxref=NCBI_GP:WJG81851.1;Name=WJG81851.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=PUW38_03480;product=chitoporin;protein_id=WJG81851.1;transl_table=11 CP118116.1 Genbank gene 741335 741667 . + . ID=gene-PUW38_03485;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=PUW38_03485 CP118116.1 Protein Homology CDS 741335 741667 . + 0 ID=cds-WJG81852.1;Parent=gene-PUW38_03485;Dbxref=NCBI_GP:WJG81852.1;Name=WJG81852.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=PUW38_03485;product=ChiQ/YbfN family lipoprotein;protein_id=WJG81852.1;transl_table=11 CP118116.1 Genbank gene 741716 743020 . - . ID=gene-PUW38_03490;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=PUW38_03490 CP118116.1 Protein Homology CDS 741716 743020 . - 0 ID=cds-WJG81853.1;Parent=gene-PUW38_03490;Dbxref=NCBI_GP:WJG81853.1;Name=WJG81853.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=PUW38_03490;product=tricarballylate/proton symporter TcuC;protein_id=WJG81853.1;transl_table=11 CP118116.1 Genbank pseudogene 743071 744209 . - . ID=gene-PUW38_03495;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=pseudogene;locus_tag=PUW38_03495;pseudo=true CP118116.1 Protein Homology CDS 743071 744209 . - 0 ID=cds-PUW38_03495;Parent=gene-PUW38_03495;Note=frameshifted;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=PUW38_03495;product=tricarballylate utilization protein TcuB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 744196 745599 . - . ID=gene-PUW38_03500;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=PUW38_03500 CP118116.1 Protein Homology CDS 744196 745599 . - 0 ID=cds-WJG81854.1;Parent=gene-PUW38_03500;Dbxref=NCBI_GP:WJG81854.1;Name=WJG81854.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=PUW38_03500;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WJG81854.1;transl_table=11 CP118116.1 Genbank gene 745697 746623 . - . ID=gene-PUW38_03505;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=PUW38_03505 CP118116.1 Protein Homology CDS 745697 746623 . - 0 ID=cds-WJG81855.1;Parent=gene-PUW38_03505;Dbxref=NCBI_GP:WJG81855.1;Name=WJG81855.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=PUW38_03505;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WJG81855.1;transl_table=11 CP118116.1 Genbank gene 746738 747190 . - . ID=gene-PUW38_03510;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=PUW38_03510 CP118116.1 Protein Homology CDS 746738 747190 . - 0 ID=cds-WJG81856.1;Parent=gene-PUW38_03510;Dbxref=NCBI_GP:WJG81856.1;Name=WJG81856.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=PUW38_03510;product=ferric iron uptake transcriptional regulator;protein_id=WJG81856.1;transl_table=11 CP118116.1 Genbank pseudogene 747183 747268 . - . ID=gene-PUW38_03515;Name=PUW38_03515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_03515;pseudo=true CP118116.1 Protein Homology CDS 747183 747268 . - 0 ID=cds-PUW38_03515;Parent=gene-PUW38_03515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=PUW38_03515;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 CP118116.1 Genbank gene 747472 748002 . - . ID=gene-PUW38_03520;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=PUW38_03520 CP118116.1 Protein Homology CDS 747472 748002 . - 0 ID=cds-WJG81857.1;Parent=gene-PUW38_03520;Dbxref=NCBI_GP:WJG81857.1;Name=WJG81857.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=PUW38_03520;product=flavodoxin FldA;protein_id=WJG81857.1;transl_table=11 CP118116.1 Genbank gene 748153 748446 . - . ID=gene-PUW38_03525;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=PUW38_03525 CP118116.1 Protein Homology CDS 748153 748446 . - 0 ID=cds-WJG81858.1;Parent=gene-PUW38_03525;Dbxref=NCBI_GP:WJG81858.1;Name=WJG81858.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=PUW38_03525;product=LexA regulated protein;protein_id=WJG81858.1;transl_table=11 CP118116.1 Genbank gene 748580 749350 . - . ID=gene-PUW38_03530;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=PUW38_03530 CP118116.1 Protein Homology CDS 748580 749350 . - 0 ID=cds-WJG81859.1;Parent=gene-PUW38_03530;Dbxref=NCBI_GP:WJG81859.1;Name=WJG81859.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=PUW38_03530;product=esterase;protein_id=WJG81859.1;transl_table=11 CP118116.1 Genbank gene 749535 750077 . + . ID=gene-PUW38_03535;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=PUW38_03535 CP118116.1 Protein Homology CDS 749535 750077 . + 0 ID=cds-WJG81860.1;Parent=gene-PUW38_03535;Dbxref=NCBI_GP:WJG81860.1;Name=WJG81860.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=PUW38_03535;product=replication initiation negative regulator SeqA;protein_id=WJG81860.1;transl_table=11 CP118116.1 Genbank gene 750102 751742 . + . ID=gene-PUW38_03540;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=PUW38_03540 CP118116.1 Protein Homology CDS 750102 751742 . + 0 ID=cds-WJG81861.1;Parent=gene-PUW38_03540;Dbxref=NCBI_GP:WJG81861.1;Name=WJG81861.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=PUW38_03540;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WJG81861.1;transl_table=11 CP118116.1 Genbank gene 751857 752342 . - . ID=gene-PUW38_03545;Name=PUW38_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03545 CP118116.1 Protein Homology CDS 751857 752342 . - 0 ID=cds-WJG81862.1;Parent=gene-PUW38_03545;Dbxref=NCBI_GP:WJG81862.1;Name=WJG81862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=PUW38_03545;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WJG81862.1;transl_table=11 CP118116.1 Genbank gene 752407 753726 . - . ID=gene-PUW38_03550;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=PUW38_03550 CP118116.1 Protein Homology CDS 752407 753726 . - 0 ID=cds-WJG81863.1;Parent=gene-PUW38_03550;Dbxref=NCBI_GP:WJG81863.1;Name=WJG81863.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=PUW38_03550;product=putrescine-ornithine antiporter;protein_id=WJG81863.1;transl_table=11 CP118116.1 Genbank gene 753723 755921 . - . ID=gene-PUW38_03555;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=PUW38_03555 CP118116.1 Protein Homology CDS 753723 755921 . - 0 ID=cds-WJG81864.1;Parent=gene-PUW38_03555;Dbxref=NCBI_GP:WJG81864.1;Name=WJG81864.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=PUW38_03555;product=ornithine decarboxylase SpeF;protein_id=WJG81864.1;transl_table=11 CP118116.1 Genbank gene 756301 756405 . - . ID=gene-PUW38_03560;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=PUW38_03560 CP118116.1 Protein Homology CDS 756301 756405 . - 0 ID=cds-WJG81865.1;Parent=gene-PUW38_03560;Dbxref=NCBI_GP:WJG81865.1;Name=WJG81865.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=PUW38_03560;product=leader peptide SpeFL;protein_id=WJG81865.1;transl_table=11 CP118116.1 Genbank gene 756683 757360 . - . ID=gene-PUW38_03565;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=PUW38_03565 CP118116.1 Protein Homology CDS 756683 757360 . - 0 ID=cds-WJG81866.1;Parent=gene-PUW38_03565;Dbxref=NCBI_GP:WJG81866.1;Name=WJG81866.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=PUW38_03565;product=two-component system response regulator KdpE;protein_id=WJG81866.1;transl_table=11 CP118116.1 Genbank gene 757357 760056 . - . ID=gene-PUW38_03570;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=PUW38_03570 CP118116.1 Protein Homology CDS 757357 760056 . - 0 ID=cds-WJG81867.1;Parent=gene-PUW38_03570;Dbxref=NCBI_GP:WJG81867.1;Name=WJG81867.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=PUW38_03570;product=two-component system sensor histidine kinase KdpD;protein_id=WJG81867.1;transl_table=11 CP118116.1 Genbank gene 760053 760637 . - . ID=gene-PUW38_03575;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=PUW38_03575 CP118116.1 Protein Homology CDS 760053 760637 . - 0 ID=cds-WJG83155.1;Parent=gene-PUW38_03575;Dbxref=NCBI_GP:WJG83155.1;Name=WJG83155.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=PUW38_03575;product=potassium-transporting ATPase subunit KdpC;protein_id=WJG83155.1;transl_table=11 CP118116.1 Genbank gene 760646 762703 . - . ID=gene-PUW38_03580;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=PUW38_03580 CP118116.1 Protein Homology CDS 760646 762703 . - 0 ID=cds-WJG81868.1;Parent=gene-PUW38_03580;Dbxref=NCBI_GP:WJG81868.1;Name=WJG81868.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088017.1;locus_tag=PUW38_03580;product=potassium-transporting ATPase subunit KdpB;protein_id=WJG81868.1;transl_table=11 CP118116.1 Genbank gene 762724 764403 . - . ID=gene-PUW38_03585;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=PUW38_03585 CP118116.1 Protein Homology CDS 762724 764403 . - 0 ID=cds-WJG81869.1;Parent=gene-PUW38_03585;Dbxref=NCBI_GP:WJG81869.1;Name=WJG81869.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=PUW38_03585;product=potassium-transporting ATPase subunit KdpA;protein_id=WJG81869.1;transl_table=11 CP118116.1 Genbank gene 764403 764492 . - . ID=gene-PUW38_03590;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=PUW38_03590 CP118116.1 Protein Homology CDS 764403 764492 . - 0 ID=cds-WJG81870.1;Parent=gene-PUW38_03590;Dbxref=NCBI_GP:WJG81870.1;Name=WJG81870.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=PUW38_03590;product=K(+)-transporting ATPase subunit F;protein_id=WJG81870.1;transl_table=11 CP118116.1 Genbank gene 764829 765035 . + . ID=gene-PUW38_03595;Name=PUW38_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03595 CP118116.1 Protein Homology CDS 764829 765035 . + 0 ID=cds-WJG81871.1;Parent=gene-PUW38_03595;Dbxref=NCBI_GP:WJG81871.1;Name=WJG81871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=PUW38_03595;product=YbfA family protein;protein_id=WJG81871.1;transl_table=11 CP118116.1 Genbank gene 765147 766568 . + . ID=gene-PUW38_03600;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=PUW38_03600 CP118116.1 Protein Homology CDS 765147 766568 . + 0 ID=cds-WJG81872.1;Parent=gene-PUW38_03600;Dbxref=NCBI_GP:WJG81872.1;Name=WJG81872.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=PUW38_03600;product=deoxyribodipyrimidine photo-lyase;protein_id=WJG81872.1;transl_table=11 CP118116.1 Genbank gene 766606 768087 . - . ID=gene-PUW38_03605;Name=PUW38_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03605 CP118116.1 Protein Homology CDS 766606 768087 . - 0 ID=cds-WJG81873.1;Parent=gene-PUW38_03605;Dbxref=NCBI_GP:WJG81873.1;Name=WJG81873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=PUW38_03605;product=MFS transporter;protein_id=WJG81873.1;transl_table=11 CP118116.1 Genbank gene 768416 769159 . + . ID=gene-PUW38_03610;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=PUW38_03610 CP118116.1 Protein Homology CDS 768416 769159 . + 0 ID=cds-WJG83156.1;Parent=gene-PUW38_03610;Dbxref=NCBI_GP:WJG83156.1;Name=WJG83156.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=PUW38_03610;product=radiation resistance protein YbgI;protein_id=WJG83156.1;transl_table=11 CP118116.1 Genbank gene 769175 769831 . + . ID=gene-PUW38_03615;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=PUW38_03615 CP118116.1 Protein Homology CDS 769175 769831 . + 0 ID=cds-WJG81874.1;Parent=gene-PUW38_03615;Dbxref=NCBI_GP:WJG81874.1;Name=WJG81874.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=PUW38_03615;product=5-oxoprolinase subunit PxpB;protein_id=WJG81874.1;transl_table=11 CP118116.1 Genbank gene 769825 770757 . + . ID=gene-PUW38_03620;Name=PUW38_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03620 CP118116.1 Protein Homology CDS 769825 770757 . + 0 ID=cds-WJG81875.1;Parent=gene-PUW38_03620;Dbxref=NCBI_GP:WJG81875.1;Name=WJG81875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=PUW38_03620;product=biotin-dependent carboxyltransferase family protein;protein_id=WJG81875.1;transl_table=11 CP118116.1 Genbank gene 770747 771481 . + . ID=gene-PUW38_03625;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=PUW38_03625 CP118116.1 Protein Homology CDS 770747 771481 . + 0 ID=cds-WJG81876.1;Parent=gene-PUW38_03625;Dbxref=NCBI_GP:WJG81876.1;Name=WJG81876.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=PUW38_03625;product=5-oxoprolinase subunit PxpA;protein_id=WJG81876.1;transl_table=11 CP118116.1 Genbank gene 771603 772394 . + . ID=gene-PUW38_03630;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=PUW38_03630 CP118116.1 Protein Homology CDS 771603 772394 . + 0 ID=cds-WJG81877.1;Parent=gene-PUW38_03630;Dbxref=NCBI_GP:WJG81877.1;Name=WJG81877.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=PUW38_03630;product=endonuclease VIII;protein_id=WJG81877.1;transl_table=11 CP118116.1 Genbank gene 772449 773495 . - . ID=gene-PUW38_03635;Name=PUW38_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03635 CP118116.1 Protein Homology CDS 772449 773495 . - 0 ID=cds-WJG81878.1;Parent=gene-PUW38_03635;Dbxref=NCBI_GP:WJG81878.1;Name=WJG81878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=PUW38_03635;product=AbrB family transcriptional regulator;protein_id=WJG81878.1;transl_table=11 CP118116.1 Genbank gene 773632 774915 . - . ID=gene-PUW38_03640;Name=PUW38_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03640 CP118116.1 Protein Homology CDS 773632 774915 . - 0 ID=cds-WJG81879.1;Parent=gene-PUW38_03640;Dbxref=NCBI_GP:WJG81879.1;Name=WJG81879.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=PUW38_03640;product=citrate synthase;protein_id=WJG81879.1;transl_table=11 CP118116.1 Genbank gene 775016 775261 . + . ID=gene-PUW38_03645;Name=PUW38_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03645 CP118116.1 GeneMarkS-2+ CDS 775016 775261 . + 0 ID=cds-WJG81880.1;Parent=gene-PUW38_03645;Dbxref=NCBI_GP:WJG81880.1;Name=WJG81880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_03645;product=hypothetical protein;protein_id=WJG81880.1;transl_table=11 CP118116.1 Genbank gene 775655 776059 . + . ID=gene-PUW38_03650;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=PUW38_03650 CP118116.1 Protein Homology CDS 775655 776059 . + 0 ID=cds-WJG81881.1;Parent=gene-PUW38_03650;Dbxref=NCBI_GP:WJG81881.1;Name=WJG81881.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=PUW38_03650;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WJG81881.1;transl_table=11 CP118116.1 Genbank pseudogene 776053 776399 . + . ID=gene-PUW38_03655;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=pseudogene;gene_synonym=cybS,dhsD;locus_tag=PUW38_03655;pseudo=true CP118116.1 Protein Homology CDS 776053 776399 . + 0 ID=cds-PUW38_03655;Parent=gene-PUW38_03655;Note=frameshifted;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=PUW38_03655;product=succinate dehydrogenase membrane anchor subunit;pseudo=true;transl_table=11 CP118116.1 Genbank gene 776399 778165 . + . ID=gene-PUW38_03660;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=PUW38_03660 CP118116.1 Protein Homology CDS 776399 778165 . + 0 ID=cds-WJG81882.1;Parent=gene-PUW38_03660;Dbxref=NCBI_GP:WJG81882.1;Name=WJG81882.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=PUW38_03660;product=succinate dehydrogenase flavoprotein subunit;protein_id=WJG81882.1;transl_table=11 CP118116.1 Genbank gene 778182 778898 . + . ID=gene-PUW38_03665;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=PUW38_03665 CP118116.1 Protein Homology CDS 778182 778898 . + 0 ID=cds-WJG83157.1;Parent=gene-PUW38_03665;Dbxref=NCBI_GP:WJG83157.1;Name=WJG83157.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=PUW38_03665;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WJG83157.1;transl_table=11 CP118116.1 Genbank gene 779422 782223 . + . ID=gene-PUW38_03670;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=PUW38_03670 CP118116.1 Protein Homology CDS 779422 782223 . + 0 ID=cds-WJG81883.1;Parent=gene-PUW38_03670;Dbxref=NCBI_GP:WJG81883.1;Name=WJG81883.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=PUW38_03670;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WJG81883.1;transl_table=11 CP118116.1 Genbank gene 782238 783446 . + . ID=gene-PUW38_03675;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=PUW38_03675 CP118116.1 Protein Homology CDS 782238 783446 . + 0 ID=cds-WJG81884.1;Parent=gene-PUW38_03675;Dbxref=NCBI_GP:WJG81884.1;Name=WJG81884.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=PUW38_03675;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WJG81884.1;transl_table=11 CP118116.1 Genbank pseudogene 783588 784753 . + . ID=gene-PUW38_03680;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=pseudogene;locus_tag=PUW38_03680;pseudo=true CP118116.1 Protein Homology CDS 783588 784753 . + 0 ID=cds-PUW38_03680;Parent=gene-PUW38_03680;Note=frameshifted;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=PUW38_03680;product=ADP-forming succinate--CoA ligase subunit beta;pseudo=true;transl_table=11 CP118116.1 Genbank gene 784753 785622 . + . ID=gene-PUW38_03685;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=PUW38_03685 CP118116.1 Protein Homology CDS 784753 785622 . + 0 ID=cds-WJG81885.1;Parent=gene-PUW38_03685;Dbxref=NCBI_GP:WJG81885.1;Name=WJG81885.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=PUW38_03685;product=succinate--CoA ligase subunit alpha;protein_id=WJG81885.1;transl_table=11 CP118116.1 Genbank gene 787205 788773 . + . ID=gene-PUW38_03690;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=PUW38_03690 CP118116.1 Protein Homology CDS 787205 788773 . + 0 ID=cds-WJG83158.1;Parent=gene-PUW38_03690;Dbxref=NCBI_GP:WJG83158.1;Name=WJG83158.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=PUW38_03690;product=cytochrome ubiquinol oxidase subunit I;protein_id=WJG83158.1;transl_table=11 CP118116.1 Genbank gene 788789 789928 . + . ID=gene-PUW38_03695;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PUW38_03695 CP118116.1 Protein Homology CDS 788789 789928 . + 0 ID=cds-WJG81886.1;Parent=gene-PUW38_03695;Dbxref=NCBI_GP:WJG81886.1;Name=WJG81886.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=PUW38_03695;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WJG81886.1;transl_table=11 CP118116.1 Genbank gene 789943 790056 . + . ID=gene-PUW38_03700;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=PUW38_03700 CP118116.1 Protein Homology CDS 789943 790056 . + 0 ID=cds-WJG81887.1;Parent=gene-PUW38_03700;Dbxref=NCBI_GP:WJG81887.1;Name=WJG81887.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=PUW38_03700;product=cytochrome bd-I oxidase subunit CydX;protein_id=WJG81887.1;transl_table=11 CP118116.1 Genbank pseudogene 790056 790348 . + . ID=gene-PUW38_03705;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=pseudogene;locus_tag=PUW38_03705;pseudo=true CP118116.1 Protein Homology CDS 790056 790348 . + 0 ID=cds-PUW38_03705;Parent=gene-PUW38_03705;Note=frameshifted;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=PUW38_03705;product=cyd operon protein YbgE;pseudo=true;transl_table=11 CP118116.1 Genbank gene 790577 790981 . + . ID=gene-PUW38_03710;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=PUW38_03710 CP118116.1 Protein Homology CDS 790577 790981 . + 0 ID=cds-WJG81888.1;Parent=gene-PUW38_03710;Dbxref=NCBI_GP:WJG81888.1;Name=WJG81888.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=PUW38_03710;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WJG81888.1;transl_table=11 CP118116.1 Genbank gene 790978 791670 . + . ID=gene-PUW38_03715;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=PUW38_03715 CP118116.1 Protein Homology CDS 790978 791670 . + 0 ID=cds-WJG81889.1;Parent=gene-PUW38_03715;Dbxref=NCBI_GP:WJG81889.1;Name=WJG81889.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=PUW38_03715;product=Tol-Pal system protein TolQ;protein_id=WJG81889.1;transl_table=11 CP118116.1 Genbank gene 791674 792102 . + . ID=gene-PUW38_03720;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=PUW38_03720 CP118116.1 Protein Homology CDS 791674 792102 . + 0 ID=cds-WJG81890.1;Parent=gene-PUW38_03720;Dbxref=NCBI_GP:WJG81890.1;Name=WJG81890.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=PUW38_03720;product=colicin uptake protein TolR;protein_id=WJG81890.1;transl_table=11 CP118116.1 Genbank pseudogene 792167 793476 . + . ID=gene-PUW38_03725;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=pseudogene;locus_tag=PUW38_03725;pseudo=true CP118116.1 Protein Homology CDS 792167 793476 . + 0 ID=cds-PUW38_03725;Parent=gene-PUW38_03725;Note=frameshifted;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=PUW38_03725;product=cell envelope integrity protein TolA;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 793600 794891 . + . ID=gene-PUW38_03730;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=pseudogene;locus_tag=PUW38_03730;pseudo=true CP118116.1 Protein Homology CDS 793600 794891 . + 0 ID=cds-PUW38_03730;Parent=gene-PUW38_03730;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=PUW38_03730;product=Tol-Pal system beta propeller repeat protein TolB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 794926 795450 . + . ID=gene-PUW38_03735;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=PUW38_03735 CP118116.1 Protein Homology CDS 794926 795450 . + 0 ID=cds-WJG81891.1;Parent=gene-PUW38_03735;Dbxref=NCBI_GP:WJG81891.1;Name=WJG81891.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=PUW38_03735;product=peptidoglycan-associated lipoprotein Pal;protein_id=WJG81891.1;transl_table=11 CP118116.1 Genbank gene 795460 796248 . + . ID=gene-PUW38_03740;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=PUW38_03740 CP118116.1 Protein Homology CDS 795460 796248 . + 0 ID=cds-WJG81892.1;Parent=gene-PUW38_03740;Dbxref=NCBI_GP:WJG81892.1;Name=WJG81892.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=PUW38_03740;product=cell division protein CpoB;protein_id=WJG81892.1;transl_table=11 CP118116.1 Genbank gene 796413 796488 . + . ID=gene-PUW38_03745;Name=PUW38_03745;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_03745 CP118116.1 tRNAscan-SE tRNA 796413 796488 . + . ID=rna-PUW38_03745;Parent=gene-PUW38_03745;anticodon=(pos:796446..796448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03745;product=tRNA-Lys CP118116.1 tRNAscan-SE exon 796413 796488 . + . ID=exon-PUW38_03745-1;Parent=rna-PUW38_03745;anticodon=(pos:796446..796448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03745;product=tRNA-Lys CP118116.1 Genbank gene 796625 796700 . + . ID=gene-PUW38_03750;Name=PUW38_03750;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_03750 CP118116.1 tRNAscan-SE tRNA 796625 796700 . + . ID=rna-PUW38_03750;Parent=gene-PUW38_03750;anticodon=(pos:796658..796660);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03750;product=tRNA-Val CP118116.1 tRNAscan-SE exon 796625 796700 . + . ID=exon-PUW38_03750-1;Parent=rna-PUW38_03750;anticodon=(pos:796658..796660);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03750;product=tRNA-Val CP118116.1 Genbank gene 796704 796779 . + . ID=gene-PUW38_03755;Name=PUW38_03755;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_03755 CP118116.1 tRNAscan-SE tRNA 796704 796779 . + . ID=rna-PUW38_03755;Parent=gene-PUW38_03755;anticodon=(pos:796737..796739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03755;product=tRNA-Lys CP118116.1 tRNAscan-SE exon 796704 796779 . + . ID=exon-PUW38_03755-1;Parent=rna-PUW38_03755;anticodon=(pos:796737..796739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_03755;product=tRNA-Lys CP118116.1 Genbank gene 797198 798241 . + . ID=gene-PUW38_03760;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=PUW38_03760 CP118116.1 Protein Homology CDS 797198 798241 . + 0 ID=cds-WJG81893.1;Parent=gene-PUW38_03760;Dbxref=NCBI_GP:WJG81893.1;Name=WJG81893.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=PUW38_03760;product=quinolinate synthase NadA;protein_id=WJG81893.1;transl_table=11 CP118116.1 Genbank gene 798266 798985 . + . ID=gene-PUW38_03765;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=PUW38_03765 CP118116.1 Protein Homology CDS 798266 798985 . + 0 ID=cds-WJG81894.1;Parent=gene-PUW38_03765;Dbxref=NCBI_GP:WJG81894.1;Name=WJG81894.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=PUW38_03765;product=nicotinamide riboside transporter PnuC;protein_id=WJG81894.1;transl_table=11 CP118116.1 Genbank gene 798982 799920 . - . ID=gene-PUW38_03770;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=PUW38_03770 CP118116.1 Protein Homology CDS 798982 799920 . - 0 ID=cds-WJG81895.1;Parent=gene-PUW38_03770;Dbxref=NCBI_GP:WJG81895.1;Name=WJG81895.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=PUW38_03770;product=CDF family zinc transporter ZitB;protein_id=WJG81895.1;transl_table=11 CP118116.1 Genbank gene 800031 800417 . - . ID=gene-PUW38_03775;Name=PUW38_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03775 CP118116.1 Protein Homology CDS 800031 800417 . - 0 ID=cds-WJG81896.1;Parent=gene-PUW38_03775;Dbxref=NCBI_GP:WJG81896.1;Name=WJG81896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=PUW38_03775;product=YbgS-like family protein;protein_id=WJG81896.1;transl_table=11 CP118116.1 Genbank pseudogene 800737 801788 . + . ID=gene-PUW38_03780;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=pseudogene;locus_tag=PUW38_03780;pseudo=true CP118116.1 Protein Homology CDS 800737 801788 . + 0 ID=cds-PUW38_03780;Parent=gene-PUW38_03780;Note=frameshifted;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=PUW38_03780;product=3-deoxy-7-phosphoheptulonate synthase AroG;pseudo=true;transl_table=11 CP118116.1 Genbank gene 801882 802427 . - . ID=gene-PUW38_03785;Name=PUW38_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03785 CP118116.1 Protein Homology CDS 801882 802427 . - 0 ID=cds-WJG81897.1;Parent=gene-PUW38_03785;Dbxref=NCBI_GP:WJG81897.1;Name=WJG81897.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=PUW38_03785;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WJG81897.1;transl_table=11 CP118116.1 Genbank gene 802442 803287 . - . ID=gene-PUW38_03790;Name=PUW38_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03790 CP118116.1 Protein Homology CDS 802442 803287 . - 0 ID=cds-WJG81898.1;Parent=gene-PUW38_03790;Dbxref=NCBI_GP:WJG81898.1;Name=WJG81898.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=PUW38_03790;product=fumarate hydratase;protein_id=WJG81898.1;transl_table=11 CP118116.1 Genbank pseudogene 803417 804306 . + . ID=gene-PUW38_03795;Name=PUW38_03795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_03795;pseudo=true CP118116.1 Protein Homology CDS 803417 804306 . + 0 ID=cds-PUW38_03795;Parent=gene-PUW38_03795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=PUW38_03795;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 804307 805290 . - . ID=gene-PUW38_03800;Name=PUW38_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03800 CP118116.1 Protein Homology CDS 804307 805290 . - 0 ID=cds-WJG81899.1;Parent=gene-PUW38_03800;Dbxref=NCBI_GP:WJG81899.1;Name=WJG81899.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=PUW38_03800;product=LysR family transcriptional regulator;protein_id=WJG81899.1;transl_table=11 CP118116.1 Genbank gene 805513 806781 . + . ID=gene-PUW38_03805;Name=PUW38_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03805 CP118116.1 Protein Homology CDS 805513 806781 . + 0 ID=cds-WJG81900.1;Parent=gene-PUW38_03805;Dbxref=NCBI_GP:WJG81900.1;Name=WJG81900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=PUW38_03805;product=SLC13 family permease;protein_id=WJG81900.1;transl_table=11 CP118116.1 Genbank gene 806831 807070 . + . ID=gene-PUW38_03810;Name=PUW38_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03810 CP118116.1 Protein Homology CDS 806831 807070 . + 0 ID=cds-WJG81901.1;Parent=gene-PUW38_03810;Dbxref=NCBI_GP:WJG81901.1;Name=WJG81901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=PUW38_03810;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJG81901.1;transl_table=11 CP118116.1 Genbank gene 807087 808859 . + . ID=gene-PUW38_03815;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW38_03815 CP118116.1 Protein Homology CDS 807087 808859 . + 0 ID=cds-WJG81902.1;Parent=gene-PUW38_03815;Dbxref=NCBI_GP:WJG81902.1;Name=WJG81902.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW38_03815;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJG81902.1;transl_table=11 CP118116.1 Genbank gene 808872 810146 . + . ID=gene-PUW38_03820;Name=PUW38_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03820 CP118116.1 Protein Homology CDS 808872 810146 . + 0 ID=cds-WJG81903.1;Parent=gene-PUW38_03820;Dbxref=NCBI_GP:WJG81903.1;Name=WJG81903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW38_03820;product=oxalacetate decarboxylase subunit beta;protein_id=WJG81903.1;transl_table=11 CP118116.1 Genbank gene 810265 810963 . + . ID=gene-PUW38_03825;Name=PUW38_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03825 CP118116.1 Protein Homology CDS 810265 810963 . + 0 ID=cds-WJG81904.1;Parent=gene-PUW38_03825;Dbxref=NCBI_GP:WJG81904.1;Name=WJG81904.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=PUW38_03825;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WJG81904.1;transl_table=11 CP118116.1 Genbank gene 811343 812422 . + . ID=gene-PUW38_03830;Name=PUW38_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03830 CP118116.1 Protein Homology CDS 811343 812422 . + 0 ID=cds-WJG81905.1;Parent=gene-PUW38_03830;Dbxref=NCBI_GP:WJG81905.1;Name=WJG81905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=PUW38_03830;product=iron ABC transporter permease;protein_id=WJG81905.1;transl_table=11 CP118116.1 Genbank gene 812422 813198 . + . ID=gene-PUW38_03835;Name=PUW38_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03835 CP118116.1 Protein Homology CDS 812422 813198 . + 0 ID=cds-WJG81906.1;Parent=gene-PUW38_03835;Dbxref=NCBI_GP:WJG81906.1;Name=WJG81906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=PUW38_03835;product=ABC transporter ATP-binding protein;protein_id=WJG81906.1;transl_table=11 CP118116.1 Genbank gene 813289 814041 . - . ID=gene-PUW38_03840;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=PUW38_03840 CP118116.1 Protein Homology CDS 813289 814041 . - 0 ID=cds-WJG81907.1;Parent=gene-PUW38_03840;Dbxref=NCBI_GP:WJG81907.1;Name=WJG81907.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=PUW38_03840;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WJG81907.1;transl_table=11 CP118116.1 Genbank pseudogene 814265 815304 . - . ID=gene-PUW38_03845;Name=galM;gbkey=Gene;gene=galM;gene_biotype=pseudogene;locus_tag=PUW38_03845;pseudo=true CP118116.1 Protein Homology CDS 814265 815304 . - 0 ID=cds-PUW38_03845;Parent=gene-PUW38_03845;Note=frameshifted;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=PUW38_03845;product=galactose-1-epimerase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 815298 816446 . - . ID=gene-PUW38_03850;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=PUW38_03850 CP118116.1 Protein Homology CDS 815298 816446 . - 0 ID=cds-WJG81908.1;Parent=gene-PUW38_03850;Dbxref=NCBI_GP:WJG81908.1;Name=WJG81908.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=PUW38_03850;product=galactokinase;protein_id=WJG81908.1;transl_table=11 CP118116.1 Genbank pseudogene 816449 817494 . - . ID=gene-PUW38_03855;Name=galT;gbkey=Gene;gene=galT;gene_biotype=pseudogene;locus_tag=PUW38_03855;pseudo=true CP118116.1 Protein Homology CDS 816449 817494 . - 0 ID=cds-PUW38_03855;Parent=gene-PUW38_03855;Note=frameshifted;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=PUW38_03855;product=galactose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 817505 818521 . - . ID=gene-PUW38_03860;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=PUW38_03860 CP118116.1 Protein Homology CDS 817505 818521 . - 0 ID=cds-WJG81909.1;Parent=gene-PUW38_03860;Dbxref=NCBI_GP:WJG81909.1;Name=WJG81909.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=PUW38_03860;product=UDP-glucose 4-epimerase GalE;protein_id=WJG81909.1;transl_table=11 CP118116.1 Genbank gene 818744 819652 . - . ID=gene-PUW38_03865;Name=PUW38_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03865 CP118116.1 Protein Homology CDS 818744 819652 . - 0 ID=cds-WJG81910.1;Parent=gene-PUW38_03865;Dbxref=NCBI_GP:WJG81910.1;Name=WJG81910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=PUW38_03865;product=DUF2167 domain-containing protein;protein_id=WJG81910.1;transl_table=11 CP118116.1 Genbank pseudogene 819823 821297 . - . ID=gene-PUW38_03870;Name=modF;gbkey=Gene;gene=modF;gene_biotype=pseudogene;locus_tag=PUW38_03870;pseudo=true CP118116.1 Protein Homology CDS 819823 821297 . - 0 ID=cds-PUW38_03870;Parent=gene-PUW38_03870;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=PUW38_03870;product=molybdate ABC transporter ATP-binding protein ModF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 821365 822153 . - . ID=gene-PUW38_03875;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=PUW38_03875 CP118116.1 Protein Homology CDS 821365 822153 . - 0 ID=cds-WJG81911.1;Parent=gene-PUW38_03875;Dbxref=NCBI_GP:WJG81911.1;Name=WJG81911.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=PUW38_03875;product=molybdenum-dependent transcriptional regulator;protein_id=WJG81911.1;transl_table=11 CP118116.1 Genbank gene 822282 822431 . + . ID=gene-PUW38_03880;Name=PUW38_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03880 CP118116.1 Protein Homology CDS 822282 822431 . + 0 ID=cds-WJG81912.1;Parent=gene-PUW38_03880;Dbxref=NCBI_GP:WJG81912.1;Name=WJG81912.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=PUW38_03880;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WJG81912.1;transl_table=11 CP118116.1 Genbank gene 822598 823371 . + . ID=gene-PUW38_03885;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=PUW38_03885 CP118116.1 Protein Homology CDS 822598 823371 . + 0 ID=cds-WJG81913.1;Parent=gene-PUW38_03885;Dbxref=NCBI_GP:WJG81913.1;Name=WJG81913.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=PUW38_03885;product=molybdate ABC transporter substrate-binding protein;protein_id=WJG81913.1;transl_table=11 CP118116.1 Genbank gene 823371 824060 . + . ID=gene-PUW38_03890;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=PUW38_03890 CP118116.1 Protein Homology CDS 823371 824060 . + 0 ID=cds-WJG81914.1;Parent=gene-PUW38_03890;Dbxref=NCBI_GP:WJG81914.1;Name=WJG81914.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=PUW38_03890;product=molybdate ABC transporter permease subunit;protein_id=WJG81914.1;transl_table=11 CP118116.1 Genbank gene 824063 825121 . + . ID=gene-PUW38_03895;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=PUW38_03895 CP118116.1 Protein Homology CDS 824063 825121 . + 0 ID=cds-WJG81915.1;Parent=gene-PUW38_03895;Dbxref=NCBI_GP:WJG81915.1;Name=WJG81915.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=PUW38_03895;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WJG81915.1;transl_table=11 CP118116.1 Genbank gene 825122 825940 . - . ID=gene-PUW38_03900;Name=PUW38_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03900 CP118116.1 Protein Homology CDS 825122 825940 . - 0 ID=cds-WJG81916.1;Parent=gene-PUW38_03900;Dbxref=NCBI_GP:WJG81916.1;Name=WJG81916.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=PUW38_03900;product=pyridoxal phosphatase;protein_id=WJG81916.1;transl_table=11 CP118116.1 Genbank gene 826104 827099 . + . ID=gene-PUW38_03905;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=PUW38_03905 CP118116.1 Protein Homology CDS 826104 827099 . + 0 ID=cds-WJG81917.1;Parent=gene-PUW38_03905;Dbxref=NCBI_GP:WJG81917.1;Name=WJG81917.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=PUW38_03905;product=6-phosphogluconolactonase;protein_id=WJG81917.1;transl_table=11 CP118116.1 Genbank gene 827243 828559 . - . ID=gene-PUW38_03910;Name=PUW38_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03910 CP118116.1 Protein Homology CDS 827243 828559 . - 0 ID=cds-WJG81918.1;Parent=gene-PUW38_03910;Dbxref=NCBI_GP:WJG81918.1;Name=WJG81918.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=PUW38_03910;product=putative acyl-CoA thioester hydrolase;protein_id=WJG81918.1;transl_table=11 CP118116.1 Genbank gene 828797 830020 . + . ID=gene-PUW38_03915;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=PUW38_03915 CP118116.1 Protein Homology CDS 828797 830020 . + 0 ID=cds-WJG83159.1;Parent=gene-PUW38_03915;Dbxref=NCBI_GP:WJG83159.1;Name=WJG83159.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=PUW38_03915;product=imidazolonepropionase;protein_id=WJG83159.1;transl_table=11 CP118116.1 Genbank gene 830017 830958 . + . ID=gene-PUW38_03920;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=PUW38_03920 CP118116.1 Protein Homology CDS 830017 830958 . + 0 ID=cds-WJG81919.1;Parent=gene-PUW38_03920;Dbxref=NCBI_GP:WJG81919.1;Name=WJG81919.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=PUW38_03920;product=formimidoylglutamase;protein_id=WJG81919.1;transl_table=11 CP118116.1 Genbank gene 831003 831728 . + . ID=gene-PUW38_03925;Name=PUW38_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03925 CP118116.1 Protein Homology CDS 831003 831728 . + 0 ID=cds-WJG81920.1;Parent=gene-PUW38_03925;Dbxref=NCBI_GP:WJG81920.1;Name=WJG81920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=PUW38_03925;product=histidine utilization repressor;protein_id=WJG81920.1;transl_table=11 CP118116.1 Genbank gene 831925 833610 . + . ID=gene-PUW38_03930;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=PUW38_03930 CP118116.1 Protein Homology CDS 831925 833610 . + 0 ID=cds-WJG81921.1;Parent=gene-PUW38_03930;Dbxref=NCBI_GP:WJG81921.1;Name=WJG81921.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=PUW38_03930;product=urocanate hydratase;protein_id=WJG81921.1;transl_table=11 CP118116.1 Genbank gene 833612 835132 . + . ID=gene-PUW38_03935;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=PUW38_03935 CP118116.1 Protein Homology CDS 833612 835132 . + 0 ID=cds-WJG81922.1;Parent=gene-PUW38_03935;Dbxref=NCBI_GP:WJG81922.1;Name=WJG81922.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=PUW38_03935;product=histidine ammonia-lyase;protein_id=WJG81922.1;transl_table=11 CP118116.1 Genbank gene 835217 835693 . - . ID=gene-PUW38_03940;Name=PUW38_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03940 CP118116.1 Protein Homology CDS 835217 835693 . - 0 ID=cds-WJG81923.1;Parent=gene-PUW38_03940;Dbxref=NCBI_GP:WJG81923.1;Name=WJG81923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=PUW38_03940;product=kinase inhibitor;protein_id=WJG81923.1;transl_table=11 CP118116.1 Genbank gene 835751 837040 . - . ID=gene-PUW38_03945;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=PUW38_03945 CP118116.1 Protein Homology CDS 835751 837040 . - 0 ID=cds-WJG81924.1;Parent=gene-PUW38_03945;Dbxref=NCBI_GP:WJG81924.1;Name=WJG81924.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=PUW38_03945;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WJG81924.1;transl_table=11 CP118116.1 Genbank gene 837127 838167 . + . ID=gene-PUW38_03950;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=PUW38_03950 CP118116.1 Protein Homology CDS 837127 838167 . + 0 ID=cds-WJG81925.1;Parent=gene-PUW38_03950;Dbxref=NCBI_GP:WJG81925.1;Name=WJG81925.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=PUW38_03950;product=biotin synthase BioB;protein_id=WJG81925.1;transl_table=11 CP118116.1 Genbank gene 838164 839321 . + . ID=gene-PUW38_03955;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=PUW38_03955 CP118116.1 Protein Homology CDS 838164 839321 . + 0 ID=cds-WJG81926.1;Parent=gene-PUW38_03955;Dbxref=NCBI_GP:WJG81926.1;Name=WJG81926.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=PUW38_03955;product=8-amino-7-oxononanoate synthase;protein_id=WJG81926.1;transl_table=11 CP118116.1 Genbank gene 839305 840060 . + . ID=gene-PUW38_03960;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=PUW38_03960 CP118116.1 Protein Homology CDS 839305 840060 . + 0 ID=cds-WJG81927.1;Parent=gene-PUW38_03960;Dbxref=NCBI_GP:WJG81927.1;Name=WJG81927.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=PUW38_03960;product=malonyl-ACP O-methyltransferase BioC;protein_id=WJG81927.1;transl_table=11 CP118116.1 Genbank gene 840053 840739 . + . ID=gene-PUW38_03965;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PUW38_03965 CP118116.1 Protein Homology CDS 840053 840739 . + 0 ID=cds-WJG81928.1;Parent=gene-PUW38_03965;Dbxref=NCBI_GP:WJG81928.1;Name=WJG81928.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=PUW38_03965;product=dethiobiotin synthase;protein_id=WJG81928.1;transl_table=11 CP118116.1 Genbank gene 841389 843410 . + . ID=gene-PUW38_03970;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=PUW38_03970 CP118116.1 Protein Homology CDS 841389 843410 . + 0 ID=cds-WJG81929.1;Parent=gene-PUW38_03970;Dbxref=NCBI_GP:WJG81929.1;Name=WJG81929.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=PUW38_03970;product=excinuclease ABC subunit UvrB;protein_id=WJG81929.1;transl_table=11 CP118116.1 Genbank gene 843719 843892 . + . ID=gene-PUW38_03975;Name=PUW38_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_03975 CP118116.1 Protein Homology CDS 843719 843892 . + 0 ID=cds-WJG81930.1;Parent=gene-PUW38_03975;Dbxref=NCBI_GP:WJG81930.1;Name=WJG81930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=PUW38_03975;product=hypothetical protein;protein_id=WJG81930.1;transl_table=11 CP118116.1 Genbank pseudogene 843900 846168 . + . ID=gene-PUW38_03980;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=pseudogene;locus_tag=PUW38_03980;pseudo=true CP118116.1 Protein Homology CDS 843900 846168 . + 0 ID=cds-PUW38_03980;Parent=gene-PUW38_03980;Note=frameshifted;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=PUW38_03980;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;pseudo=true;transl_table=11 CP118116.1 Genbank gene 846260 847168 . - . ID=gene-PUW38_03985;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=PUW38_03985 CP118116.1 Protein Homology CDS 846260 847168 . - 0 ID=cds-WJG81931.1;Parent=gene-PUW38_03985;Dbxref=NCBI_GP:WJG81931.1;Name=WJG81931.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=PUW38_03985;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WJG81931.1;transl_table=11 CP118116.1 cmsearch riboswitch 847433 847577 . + . ID=id-CP118116.1:847433..847577;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118116.1 Genbank gene 847565 848554 . + . ID=gene-PUW38_03990;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=PUW38_03990 CP118116.1 Protein Homology CDS 847565 848554 . + 0 ID=cds-WJG81932.1;Parent=gene-PUW38_03990;Dbxref=NCBI_GP:WJG81932.1;Name=WJG81932.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=PUW38_03990;product=GTP 3'%2C8-cyclase MoaA;protein_id=WJG81932.1;transl_table=11 CP118116.1 Genbank gene 848576 849088 . + . ID=gene-PUW38_03995;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=PUW38_03995 CP118116.1 Protein Homology CDS 848576 849088 . + 0 ID=cds-WJG81933.1;Parent=gene-PUW38_03995;Dbxref=NCBI_GP:WJG81933.1;Name=WJG81933.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=PUW38_03995;product=molybdenum cofactor biosynthesis protein B;protein_id=WJG81933.1;transl_table=11 CP118116.1 Genbank gene 849091 849576 . + . ID=gene-PUW38_04000;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=PUW38_04000 CP118116.1 Protein Homology CDS 849091 849576 . + 0 ID=cds-WJG81934.1;Parent=gene-PUW38_04000;Dbxref=NCBI_GP:WJG81934.1;Name=WJG81934.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=PUW38_04000;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WJG81934.1;transl_table=11 CP118116.1 Genbank gene 849569 849814 . + . ID=gene-PUW38_04005;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=PUW38_04005 CP118116.1 Protein Homology CDS 849569 849814 . + 0 ID=cds-WJG81935.1;Parent=gene-PUW38_04005;Dbxref=NCBI_GP:WJG81935.1;Name=WJG81935.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=PUW38_04005;product=molybdopterin synthase sulfur carrier subunit;protein_id=WJG81935.1;transl_table=11 CP118116.1 Genbank gene 849816 850268 . + . ID=gene-PUW38_04010;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=PUW38_04010 CP118116.1 Protein Homology CDS 849816 850268 . + 0 ID=cds-WJG81936.1;Parent=gene-PUW38_04010;Dbxref=NCBI_GP:WJG81936.1;Name=WJG81936.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=PUW38_04010;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WJG81936.1;transl_table=11 CP118116.1 Genbank gene 850316 851020 . + . ID=gene-PUW38_04015;Name=PUW38_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04015 CP118116.1 Protein Homology CDS 850316 851020 . + 0 ID=cds-WJG81937.1;Parent=gene-PUW38_04015;Dbxref=NCBI_GP:WJG81937.1;Name=WJG81937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=PUW38_04015;product=Bax inhibitor-1/YccA family protein;protein_id=WJG81937.1;transl_table=11 CP118116.1 Genbank gene 851165 851872 . + . ID=gene-PUW38_04020;Name=PUW38_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04020 CP118116.1 Protein Homology CDS 851165 851872 . + 0 ID=cds-WJG81938.1;Parent=gene-PUW38_04020;Dbxref=NCBI_GP:WJG81938.1;Name=WJG81938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=PUW38_04020;product=Bax inhibitor-1 family protein;protein_id=WJG81938.1;transl_table=11 CP118116.1 Genbank gene 851896 852504 . + . ID=gene-PUW38_04025;Name=PUW38_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04025 CP118116.1 Protein Homology CDS 851896 852504 . + 0 ID=cds-WJG83160.1;Parent=gene-PUW38_04025;Dbxref=NCBI_GP:WJG83160.1;Name=WJG83160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=PUW38_04025;product=hypothetical protein;protein_id=WJG83160.1;transl_table=11 CP118116.1 Genbank gene 852512 853072 . + . ID=gene-PUW38_04030;Name=PUW38_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04030 CP118116.1 Protein Homology CDS 852512 853072 . + 0 ID=cds-WJG81939.1;Parent=gene-PUW38_04030;Dbxref=NCBI_GP:WJG81939.1;Name=WJG81939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=PUW38_04030;product=hypothetical protein;protein_id=WJG81939.1;transl_table=11 CP118116.1 Genbank gene 853075 854037 . - . ID=gene-PUW38_04035;Name=PUW38_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04035 CP118116.1 Protein Homology CDS 853075 854037 . - 0 ID=cds-WJG81940.1;Parent=gene-PUW38_04035;Dbxref=NCBI_GP:WJG81940.1;Name=WJG81940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=PUW38_04035;product=YbhN family protein;protein_id=WJG81940.1;transl_table=11 CP118116.1 Genbank gene 854037 855278 . - . ID=gene-PUW38_04040;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=PUW38_04040 CP118116.1 Protein Homology CDS 854037 855278 . - 0 ID=cds-WJG81941.1;Parent=gene-PUW38_04040;Dbxref=NCBI_GP:WJG81941.1;Name=WJG81941.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=PUW38_04040;product=cardiolipin synthase ClsB;protein_id=WJG81941.1;transl_table=11 CP118116.1 Genbank gene 855275 856033 . - . ID=gene-PUW38_04045;Name=PUW38_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04045 CP118116.1 Protein Homology CDS 855275 856033 . - 0 ID=cds-WJG81942.1;Parent=gene-PUW38_04045;Dbxref=NCBI_GP:WJG81942.1;Name=WJG81942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=PUW38_04045;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WJG81942.1;transl_table=11 CP118116.1 Genbank gene 856166 856576 . + . ID=gene-PUW38_04050;Name=PUW38_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04050 CP118116.1 Protein Homology CDS 856166 856576 . + 0 ID=cds-WJG81943.1;Parent=gene-PUW38_04050;Dbxref=NCBI_GP:WJG81943.1;Name=WJG81943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=PUW38_04050;product=YbhQ family protein;protein_id=WJG81943.1;transl_table=11 CP118116.1 Genbank gene 856538 857644 . - . ID=gene-PUW38_04055;Name=PUW38_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04055 CP118116.1 Protein Homology CDS 856538 857644 . - 0 ID=cds-WJG81944.1;Parent=gene-PUW38_04055;Dbxref=NCBI_GP:WJG81944.1;Name=WJG81944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=PUW38_04055;product=ABC transporter permease;protein_id=WJG81944.1;transl_table=11 CP118116.1 Genbank gene 857760 858890 . - . ID=gene-PUW38_04060;Name=PUW38_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04060 CP118116.1 Protein Homology CDS 857760 858890 . - 0 ID=cds-WJG81945.1;Parent=gene-PUW38_04060;Dbxref=NCBI_GP:WJG81945.1;Name=WJG81945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=PUW38_04060;product=ABC transporter permease;protein_id=WJG81945.1;transl_table=11 CP118116.1 Genbank gene 858883 860619 . - . ID=gene-PUW38_04065;Name=PUW38_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04065 CP118116.1 Protein Homology CDS 858883 860619 . - 0 ID=cds-WJG81946.1;Parent=gene-PUW38_04065;Dbxref=NCBI_GP:WJG81946.1;Name=WJG81946.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=PUW38_04065;product=ATP-binding cassette domain-containing protein;protein_id=WJG81946.1;transl_table=11 CP118116.1 Genbank gene 860612 861607 . - . ID=gene-PUW38_04070;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=PUW38_04070 CP118116.1 Protein Homology CDS 860612 861607 . - 0 ID=cds-WJG81947.1;Parent=gene-PUW38_04070;Dbxref=NCBI_GP:WJG81947.1;Name=WJG81947.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=PUW38_04070;product=secretion protein HlyD;protein_id=WJG81947.1;transl_table=11 CP118116.1 Genbank gene 861607 862281 . - . ID=gene-PUW38_04075;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=PUW38_04075 CP118116.1 Protein Homology CDS 861607 862281 . - 0 ID=cds-WJG81948.1;Parent=gene-PUW38_04075;Dbxref=NCBI_GP:WJG81948.1;Name=WJG81948.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=PUW38_04075;product=transcriptional regulator CecR;protein_id=WJG81948.1;transl_table=11 CP118116.1 Genbank gene 862511 863872 . + . ID=gene-PUW38_04080;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=PUW38_04080 CP118116.1 Protein Homology CDS 862511 863872 . + 0 ID=cds-WJG81949.1;Parent=gene-PUW38_04080;Dbxref=NCBI_GP:WJG81949.1;Name=WJG81949.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=PUW38_04080;product=ATP-dependent RNA helicase RhlE;protein_id=WJG81949.1;transl_table=11 CP118116.1 Genbank pseudogene 864080 866224 . + . ID=gene-PUW38_04085;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=pseudogene;locus_tag=PUW38_04085;pseudo=true CP118116.1 Protein Homology CDS 864080 866224 . + 0 ID=cds-PUW38_04085;Parent=gene-PUW38_04085;Note=internal stop;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=PUW38_04085;product=ATP-dependent DNA helicase DinG;pseudo=true;transl_table=11 CP118116.1 Genbank gene 866254 867228 . + . ID=gene-PUW38_04090;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=PUW38_04090 CP118116.1 Protein Homology CDS 866254 867228 . + 0 ID=cds-WJG81950.1;Parent=gene-PUW38_04090;Dbxref=NCBI_GP:WJG81950.1;Name=WJG81950.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=PUW38_04090;product=DNA-binding protein YbiB;protein_id=WJG81950.1;transl_table=11 CP118116.1 Genbank gene 867384 867644 . - . ID=gene-PUW38_04095;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=PUW38_04095 CP118116.1 Protein Homology CDS 867384 867644 . - 0 ID=cds-WJG81951.1;Parent=gene-PUW38_04095;Dbxref=NCBI_GP:WJG81951.1;Name=WJG81951.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=PUW38_04095;product=DUF1471 family protein YbiJ;protein_id=WJG81951.1;transl_table=11 CP118116.1 Genbank gene 867929 868195 . - . ID=gene-PUW38_04100;Name=PUW38_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04100 CP118116.1 Protein Homology CDS 867929 868195 . - 0 ID=cds-WJG81952.1;Parent=gene-PUW38_04100;Dbxref=NCBI_GP:WJG81952.1;Name=WJG81952.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=PUW38_04100;product=DksA/TraR family C4-type zinc finger protein;protein_id=WJG81952.1;transl_table=11 CP118116.1 Genbank pseudogene 868400 869322 . + . ID=gene-PUW38_04105;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=pseudogene;locus_tag=PUW38_04105;pseudo=true CP118116.1 Protein Homology CDS 868400 869322 . + 0 ID=cds-PUW38_04105;Parent=gene-PUW38_04105;Note=frameshifted;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=PUW38_04105;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 869319 871541 . - . ID=gene-PUW38_04110;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=PUW38_04110 CP118116.1 Protein Homology CDS 869319 871541 . - 0 ID=cds-WJG81953.1;Parent=gene-PUW38_04110;Dbxref=NCBI_GP:WJG81953.1;Name=WJG81953.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=PUW38_04110;product=mechanosensitive channel protein;protein_id=WJG81953.1;transl_table=11 CP118116.1 Genbank gene 871660 872382 . - . ID=gene-PUW38_04115;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=PUW38_04115 CP118116.1 Protein Homology CDS 871660 872382 . - 0 ID=cds-WJG81954.1;Parent=gene-PUW38_04115;Dbxref=NCBI_GP:WJG81954.1;Name=WJG81954.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=PUW38_04115;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WJG81954.1;transl_table=11 CP118116.1 Genbank gene 872379 873038 . - . ID=gene-PUW38_04120;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=PUW38_04120 CP118116.1 Protein Homology CDS 872379 873038 . - 0 ID=cds-WJG81955.1;Parent=gene-PUW38_04120;Dbxref=NCBI_GP:WJG81955.1;Name=WJG81955.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=PUW38_04120;product=glutamine ABC transporter permease GlnP;protein_id=WJG81955.1;transl_table=11 CP118116.1 Genbank pseudogene 873182 873927 . - . ID=gene-PUW38_04125;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=pseudogene;locus_tag=PUW38_04125;pseudo=true CP118116.1 Protein Homology CDS 873182 873927 . - 0 ID=cds-PUW38_04125;Parent=gene-PUW38_04125;Note=frameshifted;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=PUW38_04125;product=glutamine ABC transporter substrate-binding protein GlnH;pseudo=true;transl_table=11 CP118116.1 Genbank gene 874404 874907 . - . ID=gene-PUW38_04130;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=PUW38_04130 CP118116.1 Protein Homology CDS 874404 874907 . - 0 ID=cds-WJG81956.1;Parent=gene-PUW38_04130;Dbxref=NCBI_GP:WJG81956.1;Name=WJG81956.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=PUW38_04130;product=DNA starvation/stationary phase protection protein Dps;protein_id=WJG81956.1;transl_table=11 CP118116.1 Genbank pseudogene 875210 876096 . - . ID=gene-PUW38_04135;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=pseudogene;locus_tag=PUW38_04135;pseudo=true CP118116.1 Protein Homology CDS 875210 876096 . - 0 ID=cds-PUW38_04135;Parent=gene-PUW38_04135;Note=frameshifted;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=PUW38_04135;product=threonine/homoserine exporter RhtA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 876450 876965 . + . ID=gene-PUW38_04140;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=PUW38_04140 CP118116.1 Protein Homology CDS 876450 876965 . + 0 ID=cds-WJG81957.1;Parent=gene-PUW38_04140;Dbxref=NCBI_GP:WJG81957.1;Name=WJG81957.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=PUW38_04140;product=outer membrane protein OmpX;protein_id=WJG81957.1;transl_table=11 CP118116.1 Genbank gene 877028 878608 . - . ID=gene-PUW38_04145;Name=PUW38_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04145 CP118116.1 Protein Homology CDS 877028 878608 . - 0 ID=cds-WJG81958.1;Parent=gene-PUW38_04145;Dbxref=NCBI_GP:WJG81958.1;Name=WJG81958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=PUW38_04145;product=phosphoethanolamine transferase;protein_id=WJG81958.1;transl_table=11 CP118116.1 Genbank gene 878873 879001 . - . ID=gene-PUW38_04150;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=PUW38_04150 CP118116.1 Protein Homology CDS 878873 879001 . - 0 ID=cds-WJG81959.1;Parent=gene-PUW38_04150;Dbxref=NCBI_GP:WJG81959.1;Name=WJG81959.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=PUW38_04150;product=manganase accumulation protein MntS;protein_id=WJG81959.1;transl_table=11 CP118116.1 Genbank gene 879187 879660 . + . ID=gene-PUW38_04155;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=PUW38_04155 CP118116.1 Protein Homology CDS 879187 879660 . + 0 ID=cds-WJG81960.1;Parent=gene-PUW38_04155;Dbxref=NCBI_GP:WJG81960.1;Name=WJG81960.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=PUW38_04155;product=manganese-binding transcriptional regulator MntR;protein_id=WJG81960.1;transl_table=11 CP118116.1 Genbank pseudogene 879657 880768 . + . ID=gene-PUW38_04160;Name=PUW38_04160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04160;pseudo=true CP118116.1 Protein Homology CDS 879657 880768 . + 0 ID=cds-PUW38_04160;Parent=gene-PUW38_04160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=PUW38_04160;product=anion transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 880812 881732 . - . ID=gene-PUW38_04165;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=PUW38_04165 CP118116.1 Protein Homology CDS 880812 881732 . - 0 ID=cds-WJG81961.1;Parent=gene-PUW38_04165;Dbxref=NCBI_GP:WJG81961.1;Name=WJG81961.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=PUW38_04165;product=L%2CD-transpeptidase;protein_id=WJG81961.1;transl_table=11 CP118116.1 Genbank gene 881951 883543 . + . ID=gene-PUW38_04170;Name=PUW38_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04170 CP118116.1 Protein Homology CDS 881951 883543 . + 0 ID=cds-WJG81962.1;Parent=gene-PUW38_04170;Dbxref=NCBI_GP:WJG81962.1;Name=WJG81962.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=PUW38_04170;product=ABC-F family ATPase;protein_id=WJG81962.1;transl_table=11 CP118116.1 Genbank pseudogene 883943 884685 . + . ID=gene-PUW38_04175;Name=PUW38_04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04175;pseudo=true CP118116.1 Protein Homology CDS 883943 884685 . + 0 ID=cds-PUW38_04175;Parent=gene-PUW38_04175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=PUW38_04175;product=DUF4261 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 884714 885442 . - . ID=gene-PUW38_04180;Name=PUW38_04180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04180;pseudo=true CP118116.1 Protein Homology CDS 884714 885442 . - 0 ID=cds-PUW38_04180;Parent=gene-PUW38_04180;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=PUW38_04180;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 885638 886903 . - . ID=gene-PUW38_04185;Name=PUW38_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04185 CP118116.1 Protein Homology CDS 885638 886903 . - 0 ID=cds-WJG81963.1;Parent=gene-PUW38_04185;Dbxref=NCBI_GP:WJG81963.1;Name=WJG81963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=PUW38_04185;product=DUF1479 domain-containing protein;protein_id=WJG81963.1;transl_table=11 CP118116.1 Genbank gene 887165 887974 . + . ID=gene-PUW38_04190;Name=PUW38_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04190 CP118116.1 Protein Homology CDS 887165 887974 . + 0 ID=cds-WJG81964.1;Parent=gene-PUW38_04190;Dbxref=NCBI_GP:WJG81964.1;Name=WJG81964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=PUW38_04190;product=Cof-type HAD-IIB family hydrolase;protein_id=WJG81964.1;transl_table=11 CP118116.1 Genbank pseudogene 888052 890483 . - . ID=gene-PUW38_04195;Name=PUW38_04195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04195;pseudo=true CP118116.1 Protein Homology CDS 888052 890483 . - 0 ID=cds-PUW38_04195;Parent=gene-PUW38_04195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=PUW38_04195;product=glycyl radical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 890489 891388 . - . ID=gene-PUW38_04200;Name=PUW38_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04200 CP118116.1 Protein Homology CDS 890489 891388 . - 0 ID=cds-WJG81965.1;Parent=gene-PUW38_04200;Dbxref=NCBI_GP:WJG81965.1;Name=WJG81965.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=PUW38_04200;product=glycyl-radical enzyme activating protein;protein_id=WJG81965.1;transl_table=11 CP118116.1 Genbank gene 891666 892415 . - . ID=gene-PUW38_04205;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=PUW38_04205 CP118116.1 Protein Homology CDS 891666 892415 . - 0 ID=cds-WJG81966.1;Parent=gene-PUW38_04205;Dbxref=NCBI_GP:WJG81966.1;Name=WJG81966.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=PUW38_04205;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WJG81966.1;transl_table=11 CP118116.1 Genbank gene 892415 893650 . - . ID=gene-PUW38_04210;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=PUW38_04210 CP118116.1 Protein Homology CDS 892415 893650 . - 0 ID=cds-WJG81967.1;Parent=gene-PUW38_04210;Dbxref=NCBI_GP:WJG81967.1;Name=WJG81967.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=PUW38_04210;product=molybdopterin molybdotransferase MoeA;protein_id=WJG81967.1;transl_table=11 CP118116.1 Genbank gene 893853 894794 . + . ID=gene-PUW38_04215;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=PUW38_04215 CP118116.1 Protein Homology CDS 893853 894794 . + 0 ID=cds-WJG81968.1;Parent=gene-PUW38_04215;Dbxref=NCBI_GP:WJG81968.1;Name=WJG81968.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=PUW38_04215;product=beta-aspartyl-peptidase;protein_id=WJG81968.1;transl_table=11 CP118116.1 Genbank gene 894805 896676 . + . ID=gene-PUW38_04220;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=PUW38_04220 CP118116.1 Protein Homology CDS 894805 896676 . + 0 ID=cds-WJG81969.1;Parent=gene-PUW38_04220;Dbxref=NCBI_GP:WJG81969.1;Name=WJG81969.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=PUW38_04220;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WJG81969.1;transl_table=11 CP118116.1 Genbank pseudogene 896709 898246 . + . ID=gene-PUW38_04225;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=pseudogene;locus_tag=PUW38_04225;pseudo=true CP118116.1 Protein Homology CDS 896709 898246 . + 0 ID=cds-PUW38_04225;Parent=gene-PUW38_04225;Note=frameshifted;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=PUW38_04225;product=glutathione ABC transporter substrate-binding protein GsiB;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 898307 899226 . + . ID=gene-PUW38_04230;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=pseudogene;locus_tag=PUW38_04230;pseudo=true CP118116.1 Protein Homology CDS 898307 899226 . + 0 ID=cds-PUW38_04230;Parent=gene-PUW38_04230;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=PUW38_04230;product=glutathione ABC transporter permease GsiC;pseudo=true;transl_table=11 CP118116.1 Genbank gene 899229 900140 . + . ID=gene-PUW38_04235;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=PUW38_04235 CP118116.1 Protein Homology CDS 899229 900140 . + 0 ID=cds-WJG81970.1;Parent=gene-PUW38_04235;Dbxref=NCBI_GP:WJG81970.1;Name=WJG81970.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=PUW38_04235;product=glutathione ABC transporter permease GsiD;protein_id=WJG81970.1;transl_table=11 CP118116.1 Genbank gene 900231 901556 . - . ID=gene-PUW38_04240;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=PUW38_04240 CP118116.1 Protein Homology CDS 900231 901556 . - 0 ID=cds-WJG81971.1;Parent=gene-PUW38_04240;Dbxref=NCBI_GP:WJG81971.1;Name=WJG81971.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=PUW38_04240;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WJG81971.1;transl_table=11 CP118116.1 Genbank gene 901787 902170 . + . ID=gene-PUW38_04245;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=PUW38_04245 CP118116.1 Protein Homology CDS 901787 902170 . + 0 ID=cds-WJG81972.1;Parent=gene-PUW38_04245;Dbxref=NCBI_GP:WJG81972.1;Name=WJG81972.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=PUW38_04245;product=biofilm formation regulator BssR;protein_id=WJG81972.1;transl_table=11 CP118116.1 Genbank pseudogene 902272 902518 . + . ID=gene-PUW38_04250;Name=PUW38_04250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04250;pseudo=true CP118116.1 Protein Homology CDS 902272 902518 . + 0 ID=cds-PUW38_04250;Parent=gene-PUW38_04250;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=PUW38_04250;product=IS4 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 902883 903398 . + . ID=gene-PUW38_04255;Name=PUW38_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04255 CP118116.1 Protein Homology CDS 902883 903398 . + 0 ID=cds-WJG81973.1;Parent=gene-PUW38_04255;Dbxref=NCBI_GP:WJG81973.1;Name=WJG81973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=PUW38_04255;product=CoA ester lyase;protein_id=WJG81973.1;transl_table=11 CP118116.1 Genbank gene 903316 904170 . + . ID=gene-PUW38_04260;Name=PUW38_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04260 CP118116.1 Protein Homology CDS 903316 904170 . + 0 ID=cds-WJG81974.1;Parent=gene-PUW38_04260;Dbxref=NCBI_GP:WJG81974.1;Name=WJG81974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459832.3;locus_tag=PUW38_04260;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WJG81974.1;transl_table=11 CP118116.1 Genbank gene 904181 905134 . + . ID=gene-PUW38_04265;Name=PUW38_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04265 CP118116.1 Protein Homology CDS 904181 905134 . + 0 ID=cds-WJG81975.1;Parent=gene-PUW38_04265;Dbxref=NCBI_GP:WJG81975.1;Name=WJG81975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=PUW38_04265;product=FAD-binding protein;protein_id=WJG81975.1;transl_table=11 CP118116.1 Genbank gene 905167 905364 . + . ID=gene-PUW38_04270;Name=PUW38_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04270 CP118116.1 GeneMarkS-2+ CDS 905167 905364 . + 0 ID=cds-WJG81976.1;Parent=gene-PUW38_04270;Dbxref=NCBI_GP:WJG81976.1;Name=WJG81976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_04270;product=hypothetical protein;protein_id=WJG81976.1;transl_table=11 CP118116.1 Genbank gene 905428 906591 . + . ID=gene-PUW38_04275;Name=PUW38_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04275 CP118116.1 Protein Homology CDS 905428 906591 . + 0 ID=cds-WJG81977.1;Parent=gene-PUW38_04275;Dbxref=NCBI_GP:WJG81977.1;Name=WJG81977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=PUW38_04275;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WJG81977.1;transl_table=11 CP118116.1 Genbank gene 907040 908725 . + . ID=gene-PUW38_04280;Name=PUW38_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04280 CP118116.1 Protein Homology CDS 907040 908725 . + 0 ID=cds-WJG81978.1;Parent=gene-PUW38_04280;Dbxref=NCBI_GP:WJG81978.1;Name=WJG81978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=PUW38_04280;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WJG81978.1;transl_table=11 CP118116.1 Genbank gene 908731 909621 . - . ID=gene-PUW38_04285;Name=PUW38_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04285 CP118116.1 Protein Homology CDS 908731 909621 . - 0 ID=cds-WJG81979.1;Parent=gene-PUW38_04285;Dbxref=NCBI_GP:WJG81979.1;Name=WJG81979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=PUW38_04285;product=LysR family transcriptional regulator;protein_id=WJG81979.1;transl_table=11 CP118116.1 Genbank gene 909882 910307 . - . ID=gene-PUW38_04290;Name=PUW38_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04290 CP118116.1 Protein Homology CDS 909882 910307 . - 0 ID=cds-WJG81980.1;Parent=gene-PUW38_04290;Dbxref=NCBI_GP:WJG81980.1;Name=WJG81980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=PUW38_04290;product=GntP family permease;protein_id=WJG81980.1;transl_table=11 CP118116.1 Genbank gene 910654 911151 . + . ID=gene-PUW38_04295;Name=PUW38_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04295 CP118116.1 Protein Homology CDS 910654 911151 . + 0 ID=cds-WJG83161.1;Parent=gene-PUW38_04295;Dbxref=NCBI_GP:WJG83161.1;Name=WJG83161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=PUW38_04295;product=PQQ-dependent sugar dehydrogenase;protein_id=WJG83161.1;transl_table=11 CP118116.1 Genbank gene 911172 911333 . + . ID=gene-PUW38_04300;Name=PUW38_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04300 CP118116.1 Protein Homology CDS 911172 911333 . + 0 ID=cds-WJG83162.1;Parent=gene-PUW38_04300;Dbxref=NCBI_GP:WJG83162.1;Name=WJG83162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019607.2;locus_tag=PUW38_04300;product=PQQ-dependent sugar dehydrogenase;protein_id=WJG83162.1;transl_table=11 CP118116.1 Genbank gene 911330 911956 . - . ID=gene-PUW38_04305;Name=PUW38_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04305 CP118116.1 Protein Homology CDS 911330 911956 . - 0 ID=cds-WJG81981.1;Parent=gene-PUW38_04305;Dbxref=NCBI_GP:WJG81981.1;Name=WJG81981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=PUW38_04305;product=glutathione S-transferase family protein;protein_id=WJG81981.1;transl_table=11 CP118116.1 Genbank gene 912200 913402 . + . ID=gene-PUW38_04310;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=PUW38_04310 CP118116.1 Protein Homology CDS 912200 913402 . + 0 ID=cds-WJG81982.1;Parent=gene-PUW38_04310;Dbxref=NCBI_GP:WJG81982.1;Name=WJG81982.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=PUW38_04310;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WJG81982.1;transl_table=11 CP118116.1 Genbank gene 913447 914205 . - . ID=gene-PUW38_04315;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=PUW38_04315 CP118116.1 Protein Homology CDS 913447 914205 . - 0 ID=cds-WJG81983.1;Parent=gene-PUW38_04315;Dbxref=NCBI_GP:WJG81983.1;Name=WJG81983.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=PUW38_04315;product=DNA-binding transcriptional repressor DeoR;protein_id=WJG81983.1;transl_table=11 CP118116.1 Genbank gene 914277 914885 . - . ID=gene-PUW38_04320;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=PUW38_04320 CP118116.1 Protein Homology CDS 914277 914885 . - 0 ID=cds-WJG83163.1;Parent=gene-PUW38_04320;Dbxref=NCBI_GP:WJG83163.1;Name=WJG83163.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=PUW38_04320;product=undecaprenyl-diphosphate phosphatase;protein_id=WJG83163.1;transl_table=11 CP118116.1 Genbank gene 915198 916430 . + . ID=gene-PUW38_04325;Name=PUW38_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04325 CP118116.1 Protein Homology CDS 915198 916430 . + 0 ID=cds-WJG81984.1;Parent=gene-PUW38_04325;Dbxref=NCBI_GP:WJG81984.1;Name=WJG81984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=PUW38_04325;product=MFS transporter;protein_id=WJG81984.1;transl_table=11 CP118116.1 Genbank gene 916483 917298 . - . ID=gene-PUW38_04330;Name=PUW38_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04330 CP118116.1 Protein Homology CDS 916483 917298 . - 0 ID=cds-WJG81985.1;Parent=gene-PUW38_04330;Dbxref=NCBI_GP:WJG81985.1;Name=WJG81985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=PUW38_04330;product=Cof-type HAD-IIB family hydrolase;protein_id=WJG81985.1;transl_table=11 CP118116.1 Genbank gene 917295 918506 . - . ID=gene-PUW38_04335;Name=PUW38_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04335 CP118116.1 Protein Homology CDS 917295 918506 . - 0 ID=cds-WJG81986.1;Parent=gene-PUW38_04335;Dbxref=NCBI_GP:WJG81986.1;Name=WJG81986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=PUW38_04335;product=MFS transporter;protein_id=WJG81986.1;transl_table=11 CP118116.1 Genbank gene 918665 919285 . + . ID=gene-PUW38_04340;Name=PUW38_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04340 CP118116.1 Protein Homology CDS 918665 919285 . + 0 ID=cds-WJG81987.1;Parent=gene-PUW38_04340;Dbxref=NCBI_GP:WJG81987.1;Name=WJG81987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=PUW38_04340;product=TetR/AcrR family transcriptional regulator;protein_id=WJG81987.1;transl_table=11 CP118116.1 Genbank gene 919402 921087 . - . ID=gene-PUW38_04345;Name=PUW38_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04345 CP118116.1 Protein Homology CDS 919402 921087 . - 0 ID=cds-WJG81988.1;Parent=gene-PUW38_04345;Dbxref=NCBI_GP:WJG81988.1;Name=WJG81988.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=PUW38_04345;product=aspartate:alanine antiporter;protein_id=WJG81988.1;transl_table=11 CP118116.1 Genbank gene 921358 921735 . + . ID=gene-PUW38_04350;Name=PUW38_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04350 CP118116.1 Protein Homology CDS 921358 921735 . + 0 ID=cds-WJG81989.1;Parent=gene-PUW38_04350;Dbxref=NCBI_GP:WJG81989.1;Name=WJG81989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=PUW38_04350;product=inner membrane protein YbjM;protein_id=WJG81989.1;transl_table=11 CP118116.1 Genbank gene 921767 922030 . - . ID=gene-PUW38_04355;Name=PUW38_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04355 CP118116.1 Protein Homology CDS 921767 922030 . - 0 ID=cds-WJG81990.1;Parent=gene-PUW38_04355;Dbxref=NCBI_GP:WJG81990.1;Name=WJG81990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=PUW38_04355;product=GrxA family glutaredoxin;protein_id=WJG81990.1;transl_table=11 CP118116.1 Genbank gene 922200 922490 . + . ID=gene-PUW38_04360;Name=PUW38_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04360 CP118116.1 Protein Homology CDS 922200 922490 . + 0 ID=cds-WJG81991.1;Parent=gene-PUW38_04360;Dbxref=NCBI_GP:WJG81991.1;Name=WJG81991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=PUW38_04360;product=YbjC family protein;protein_id=WJG81991.1;transl_table=11 CP118116.1 Genbank gene 922474 923196 . + . ID=gene-PUW38_04365;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=PUW38_04365 CP118116.1 Protein Homology CDS 922474 923196 . + 0 ID=cds-WJG81992.1;Parent=gene-PUW38_04365;Dbxref=NCBI_GP:WJG81992.1;Name=WJG81992.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=PUW38_04365;product=nitroreductase NfsA;protein_id=WJG81992.1;transl_table=11 CP118116.1 Genbank gene 923254 924156 . + . ID=gene-PUW38_04370;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=PUW38_04370 CP118116.1 Protein Homology CDS 923254 924156 . + 0 ID=cds-WJG81993.1;Parent=gene-PUW38_04370;Dbxref=NCBI_GP:WJG81993.1;Name=WJG81993.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=PUW38_04370;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WJG81993.1;transl_table=11 CP118116.1 Genbank gene 924253 924729 . + . ID=gene-PUW38_04375;Name=PUW38_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04375 CP118116.1 Protein Homology CDS 924253 924729 . + 0 ID=cds-WJG81994.1;Parent=gene-PUW38_04375;Dbxref=NCBI_GP:WJG81994.1;Name=WJG81994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=PUW38_04375;product=YbjN domain-containing protein;protein_id=WJG81994.1;transl_table=11 CP118116.1 Genbank gene 925078 926190 . + . ID=gene-PUW38_04380;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=PUW38_04380 CP118116.1 Protein Homology CDS 925078 926190 . + 0 ID=cds-WJG83164.1;Parent=gene-PUW38_04380;Dbxref=NCBI_GP:WJG83164.1;Name=WJG83164.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=PUW38_04380;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WJG83164.1;transl_table=11 CP118116.1 Genbank gene 926278 927411 . + . ID=gene-PUW38_04385;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=PUW38_04385 CP118116.1 Protein Homology CDS 926278 927411 . + 0 ID=cds-WJG81995.1;Parent=gene-PUW38_04385;Dbxref=NCBI_GP:WJG81995.1;Name=WJG81995.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=PUW38_04385;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WJG81995.1;transl_table=11 CP118116.1 Genbank gene 927421 928374 . + . ID=gene-PUW38_04390;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=PUW38_04390 CP118116.1 Protein Homology CDS 927421 928374 . + 0 ID=cds-WJG81996.1;Parent=gene-PUW38_04390;Dbxref=NCBI_GP:WJG81996.1;Name=WJG81996.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=PUW38_04390;product=putrescine ABC transporter permease PotH;protein_id=WJG81996.1;transl_table=11 CP118116.1 Genbank gene 928371 929222 . + . ID=gene-PUW38_04395;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=PUW38_04395 CP118116.1 Protein Homology CDS 928371 929222 . + 0 ID=cds-WJG81997.1;Parent=gene-PUW38_04395;Dbxref=NCBI_GP:WJG81997.1;Name=WJG81997.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=PUW38_04395;product=putrescine ABC transporter permease PotI;protein_id=WJG81997.1;transl_table=11 CP118116.1 Genbank gene 929296 929769 . + . ID=gene-PUW38_04400;Name=PUW38_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04400 CP118116.1 Protein Homology CDS 929296 929769 . + 0 ID=cds-WJG83165.1;Parent=gene-PUW38_04400;Dbxref=NCBI_GP:WJG83165.1;Name=WJG83165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=PUW38_04400;product=YbjO family protein;protein_id=WJG83165.1;transl_table=11 CP118116.1 Genbank gene 929860 930939 . + . ID=gene-PUW38_04405;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=PUW38_04405 CP118116.1 Protein Homology CDS 929860 930939 . + 0 ID=cds-WJG83166.1;Parent=gene-PUW38_04405;Dbxref=NCBI_GP:WJG83166.1;Name=WJG83166.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=PUW38_04405;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WJG83166.1;transl_table=11 CP118116.1 Genbank gene 931233 932576 . + . ID=gene-PUW38_04410;Name=PUW38_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04410 CP118116.1 Protein Homology CDS 931233 932576 . + 0 ID=cds-WJG81998.1;Parent=gene-PUW38_04410;Dbxref=NCBI_GP:WJG81998.1;Name=WJG81998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=PUW38_04410;product=PTS sugar transporter subunit IIC;protein_id=WJG81998.1;transl_table=11 CP118116.1 Genbank gene 932606 932926 . + . ID=gene-PUW38_04415;Name=PUW38_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04415 CP118116.1 Protein Homology CDS 932606 932926 . + 0 ID=cds-WJG81999.1;Parent=gene-PUW38_04415;Dbxref=NCBI_GP:WJG81999.1;Name=WJG81999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=PUW38_04415;product=PTS sugar transporter subunit IIB;protein_id=WJG81999.1;transl_table=11 CP118116.1 Genbank pseudogene 932936 934422 . + . ID=gene-PUW38_04420;Name=PUW38_04420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04420;pseudo=true CP118116.1 Protein Homology CDS 932936 934422 . + 0 ID=cds-PUW38_04420;Parent=gene-PUW38_04420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=PUW38_04420;product=sulfatase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 934641 935372 . - . ID=gene-PUW38_04425;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PUW38_04425 CP118116.1 Protein Homology CDS 934641 935372 . - 0 ID=cds-WJG82000.1;Parent=gene-PUW38_04425;Dbxref=NCBI_GP:WJG82000.1;Name=WJG82000.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=PUW38_04425;product=ABC transporter substrate-binding protein ArtJ;protein_id=WJG82000.1;transl_table=11 CP118116.1 Genbank gene 935609 936277 . - . ID=gene-PUW38_04430;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=PUW38_04430 CP118116.1 Protein Homology CDS 935609 936277 . - 0 ID=cds-WJG82001.1;Parent=gene-PUW38_04430;Dbxref=NCBI_GP:WJG82001.1;Name=WJG82001.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=PUW38_04430;product=arginine ABC transporter permease ArtM;protein_id=WJG82001.1;transl_table=11 CP118116.1 Genbank gene 936277 936993 . - . ID=gene-PUW38_04435;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=PUW38_04435 CP118116.1 Protein Homology CDS 936277 936993 . - 0 ID=cds-WJG82002.1;Parent=gene-PUW38_04435;Dbxref=NCBI_GP:WJG82002.1;Name=WJG82002.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=PUW38_04435;product=arginine ABC transporter permease ArtQ;protein_id=WJG82002.1;transl_table=11 CP118116.1 Genbank gene 937000 937731 . - . ID=gene-PUW38_04440;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PUW38_04440 CP118116.1 Protein Homology CDS 937000 937731 . - 0 ID=cds-WJG82003.1;Parent=gene-PUW38_04440;Dbxref=NCBI_GP:WJG82003.1;Name=WJG82003.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=PUW38_04440;product=arginine ABC transporter substrate-binding protein;protein_id=WJG82003.1;transl_table=11 CP118116.1 Genbank gene 937749 938477 . - . ID=gene-PUW38_04445;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=PUW38_04445 CP118116.1 Protein Homology CDS 937749 938477 . - 0 ID=cds-WJG82004.1;Parent=gene-PUW38_04445;Dbxref=NCBI_GP:WJG82004.1;Name=WJG82004.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=PUW38_04445;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WJG82004.1;transl_table=11 CP118116.1 Genbank gene 938707 939222 . - . ID=gene-PUW38_04450;Name=PUW38_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04450 CP118116.1 Protein Homology CDS 938707 939222 . - 0 ID=cds-WJG82005.1;Parent=gene-PUW38_04450;Dbxref=NCBI_GP:WJG82005.1;Name=WJG82005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=PUW38_04450;product=lipoprotein;protein_id=WJG82005.1;transl_table=11 CP118116.1 Genbank gene 939350 939673 . + . ID=gene-PUW38_04455;Name=PUW38_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04455 CP118116.1 Protein Homology CDS 939350 939673 . + 0 ID=cds-WJG82006.1;Parent=gene-PUW38_04455;Dbxref=NCBI_GP:WJG82006.1;Name=WJG82006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=PUW38_04455;product=heavy metal-binding domain-containing protein;protein_id=WJG82006.1;transl_table=11 CP118116.1 Genbank gene 939670 940500 . + . ID=gene-PUW38_04460;Name=PUW38_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04460 CP118116.1 Protein Homology CDS 939670 940500 . + 0 ID=cds-WJG82007.1;Parent=gene-PUW38_04460;Dbxref=NCBI_GP:WJG82007.1;Name=WJG82007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=PUW38_04460;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WJG82007.1;transl_table=11 CP118116.1 Genbank gene 940497 941510 . - . ID=gene-PUW38_04465;Name=PUW38_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04465 CP118116.1 Protein Homology CDS 940497 941510 . - 0 ID=cds-WJG82008.1;Parent=gene-PUW38_04465;Dbxref=NCBI_GP:WJG82008.1;Name=WJG82008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=PUW38_04465;product=NAD(P)-dependent oxidoreductase;protein_id=WJG82008.1;transl_table=11 CP118116.1 Genbank pseudogene 941606 943038 . - . ID=gene-PUW38_04470;Name=PUW38_04470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04470;pseudo=true CP118116.1 Protein Homology CDS 941606 943038 . - 0 ID=cds-PUW38_04470;Parent=gene-PUW38_04470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=PUW38_04470;product=DUF2867 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 943049 944050 . - . ID=gene-PUW38_04475;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=PUW38_04475 CP118116.1 Protein Homology CDS 943049 944050 . - 0 ID=cds-WJG82009.1;Parent=gene-PUW38_04475;Dbxref=NCBI_GP:WJG82009.1;Name=WJG82009.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=PUW38_04475;product=low-specificity L-threonine aldolase;protein_id=WJG82009.1;transl_table=11 CP118116.1 Genbank gene 944089 945807 . - . ID=gene-PUW38_04480;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=PUW38_04480 CP118116.1 Protein Homology CDS 944089 945807 . - 0 ID=cds-WJG82010.1;Parent=gene-PUW38_04480;Dbxref=NCBI_GP:WJG82010.1;Name=WJG82010.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=PUW38_04480;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WJG82010.1;transl_table=11 CP118116.1 Genbank gene 945965 946933 . - . ID=gene-PUW38_04485;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=PUW38_04485 CP118116.1 Protein Homology CDS 945965 946933 . - 0 ID=cds-WJG83167.1;Parent=gene-PUW38_04485;Dbxref=NCBI_GP:WJG83167.1;Name=WJG83167.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=PUW38_04485;product=NADH oxidoreductase;protein_id=WJG83167.1;transl_table=11 CP118116.1 Genbank gene 946945 948597 . - . ID=gene-PUW38_04490;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=PUW38_04490 CP118116.1 Protein Homology CDS 946945 948597 . - 0 ID=cds-WJG82011.1;Parent=gene-PUW38_04490;Dbxref=NCBI_GP:WJG82011.1;Name=WJG82011.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=PUW38_04490;product=hydroxylamine reductase;protein_id=WJG82011.1;transl_table=11 CP118116.1 Genbank gene 948741 949640 . - . ID=gene-PUW38_04495;Name=PUW38_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04495 CP118116.1 Protein Homology CDS 948741 949640 . - 0 ID=cds-WJG82012.1;Parent=gene-PUW38_04495;Dbxref=NCBI_GP:WJG82012.1;Name=WJG82012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=PUW38_04495;product=lysine exporter LysO family protein;protein_id=WJG82012.1;transl_table=11 CP118116.1 Genbank gene 949842 951500 . + . ID=gene-PUW38_04500;Name=PUW38_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04500 CP118116.1 Protein Homology CDS 949842 951500 . + 0 ID=cds-WJG82013.1;Parent=gene-PUW38_04500;Dbxref=NCBI_GP:WJG82013.1;Name=WJG82013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=PUW38_04500;product=ATP-dependent endonuclease;protein_id=WJG82013.1;transl_table=11 CP118116.1 Genbank pseudogene 951497 952451 . - . ID=gene-PUW38_04505;Name=PUW38_04505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04505;pseudo=true CP118116.1 Protein Homology CDS 951497 952451 . - 0 ID=cds-PUW38_04505;Parent=gene-PUW38_04505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=PUW38_04505;product=VirK/YbjX family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 952597 953711 . + . ID=gene-PUW38_04510;Name=macA;gbkey=Gene;gene=macA;gene_biotype=pseudogene;locus_tag=PUW38_04510;pseudo=true CP118116.1 Protein Homology CDS 952597 953711 . + 0 ID=cds-PUW38_04510;Parent=gene-PUW38_04510;Note=frameshifted;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=PUW38_04510;product=macrolide transporter subunit MacA;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 953708 955653 . + . ID=gene-PUW38_04515;Name=macB;gbkey=Gene;gene=macB;gene_biotype=pseudogene;locus_tag=PUW38_04515;pseudo=true CP118116.1 Protein Homology CDS 953708 955653 . + 0 ID=cds-PUW38_04515;Parent=gene-PUW38_04515;Note=frameshifted;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=macB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=PUW38_04515;product=macrolide ABC transporter ATP-binding protein/permease MacB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 955783 956004 . - . ID=gene-PUW38_04520;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=PUW38_04520 CP118116.1 Protein Homology CDS 955783 956004 . - 0 ID=cds-WJG82014.1;Parent=gene-PUW38_04520;Dbxref=NCBI_GP:WJG82014.1;Name=WJG82014.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=PUW38_04520;product=cold shock-like protein CspD;protein_id=WJG82014.1;transl_table=11 CP118116.1 Genbank gene 956155 956232 . + . ID=gene-PUW38_04525;Name=PUW38_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04525 CP118116.1 Protein Homology CDS 956155 956232 . + 0 ID=cds-WJG83168.1;Parent=gene-PUW38_04525;Dbxref=NCBI_GP:WJG83168.1;Name=WJG83168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=PUW38_04525;product=hypothetical protein;protein_id=WJG83168.1;transl_table=11 CP118116.1 Genbank gene 956328 956648 . + . ID=gene-PUW38_04530;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=PUW38_04530 CP118116.1 Protein Homology CDS 956328 956648 . + 0 ID=cds-WJG82015.1;Parent=gene-PUW38_04530;Dbxref=NCBI_GP:WJG82015.1;Name=WJG82015.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=PUW38_04530;product=ATP-dependent Clp protease adapter ClpS;protein_id=WJG82015.1;transl_table=11 CP118116.1 Genbank gene 956679 958955 . + . ID=gene-PUW38_04535;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=PUW38_04535 CP118116.1 Protein Homology CDS 956679 958955 . + 0 ID=cds-WJG82016.1;Parent=gene-PUW38_04535;Dbxref=NCBI_GP:WJG82016.1;Name=WJG82016.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=PUW38_04535;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WJG82016.1;transl_table=11 CP118116.1 Genbank gene 959168 959365 . - . ID=gene-PUW38_04540;Name=PUW38_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04540 CP118116.1 Protein Homology CDS 959168 959365 . - 0 ID=cds-WJG82017.1;Parent=gene-PUW38_04540;Dbxref=NCBI_GP:WJG82017.1;Name=WJG82017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=PUW38_04540;product=hypothetical protein;protein_id=WJG82017.1;transl_table=11 CP118116.1 Genbank gene 959527 959904 . - . ID=gene-PUW38_04545;Name=PUW38_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04545 CP118116.1 Protein Homology CDS 959527 959904 . - 0 ID=cds-WJG82018.1;Parent=gene-PUW38_04545;Dbxref=NCBI_GP:WJG82018.1;Name=WJG82018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535855.1;locus_tag=PUW38_04545;product=integrase;protein_id=WJG82018.1;transl_table=11 CP118116.1 Genbank gene 960335 960421 . - . ID=gene-PUW38_04550;Name=PUW38_04550;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_04550 CP118116.1 tRNAscan-SE tRNA 960335 960421 . - . ID=rna-PUW38_04550;Parent=gene-PUW38_04550;anticodon=(pos:complement(960385..960387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_04550;product=tRNA-Ser CP118116.1 tRNAscan-SE exon 960335 960421 . - . ID=exon-PUW38_04550-1;Parent=rna-PUW38_04550;anticodon=(pos:complement(960385..960387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_04550;product=tRNA-Ser CP118116.1 Genbank gene 960570 961247 . - . ID=gene-PUW38_04555;Name=PUW38_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04555 CP118116.1 Protein Homology CDS 960570 961247 . - 0 ID=cds-WJG82019.1;Parent=gene-PUW38_04555;Dbxref=NCBI_GP:WJG82019.1;Name=WJG82019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=PUW38_04555;product=hydrolase;protein_id=WJG82019.1;transl_table=11 CP118116.1 Genbank gene 961267 962127 . - . ID=gene-PUW38_04560;Name=PUW38_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04560 CP118116.1 Protein Homology CDS 961267 962127 . - 0 ID=cds-WJG82020.1;Parent=gene-PUW38_04560;Dbxref=NCBI_GP:WJG82020.1;Name=WJG82020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=PUW38_04560;product=pirin family protein;protein_id=WJG82020.1;transl_table=11 CP118116.1 Genbank gene 962236 963147 . + . ID=gene-PUW38_04565;Name=PUW38_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04565 CP118116.1 Protein Homology CDS 962236 963147 . + 0 ID=cds-WJG82021.1;Parent=gene-PUW38_04565;Dbxref=NCBI_GP:WJG82021.1;Name=WJG82021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=PUW38_04565;product=LysR family transcriptional regulator;protein_id=WJG82021.1;transl_table=11 CP118116.1 Genbank gene 963238 963456 . - . ID=gene-PUW38_04570;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=PUW38_04570 CP118116.1 Protein Homology CDS 963238 963456 . - 0 ID=cds-WJG82022.1;Parent=gene-PUW38_04570;Dbxref=NCBI_GP:WJG82022.1;Name=WJG82022.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=PUW38_04570;product=translation initiation factor IF-1;protein_id=WJG82022.1;transl_table=11 CP118116.1 Genbank gene 963384 963767 . - . ID=gene-PUW38_04575;Name=PUW38_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04575 CP118116.1 Protein Homology CDS 963384 963767 . - 0 ID=cds-WJG82023.1;Parent=gene-PUW38_04575;Dbxref=NCBI_GP:WJG82023.1;Name=WJG82023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459930.1;locus_tag=PUW38_04575;product=hypothetical protein;protein_id=WJG82023.1;transl_table=11 CP118116.1 Genbank gene 963768 964472 . - . ID=gene-PUW38_04580;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=PUW38_04580 CP118116.1 Protein Homology CDS 963768 964472 . - 0 ID=cds-WJG82024.1;Parent=gene-PUW38_04580;Dbxref=NCBI_GP:WJG82024.1;Name=WJG82024.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=PUW38_04580;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WJG82024.1;transl_table=11 CP118116.1 Genbank gene 964517 966238 . - . ID=gene-PUW38_04585;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=PUW38_04585 CP118116.1 Protein Homology CDS 964517 966238 . - 0 ID=cds-WJG82025.1;Parent=gene-PUW38_04585;Dbxref=NCBI_GP:WJG82025.1;Name=WJG82025.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=PUW38_04585;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WJG82025.1;transl_table=11 CP118116.1 Genbank gene 966239 968005 . - . ID=gene-PUW38_04590;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=PUW38_04590 CP118116.1 Protein Homology CDS 966239 968005 . - 0 ID=cds-WJG82026.1;Parent=gene-PUW38_04590;Dbxref=NCBI_GP:WJG82026.1;Name=WJG82026.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=PUW38_04590;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WJG82026.1;transl_table=11 CP118116.1 Genbank pseudogene 968119 969086 . - . ID=gene-PUW38_04595;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=pseudogene;locus_tag=PUW38_04595;pseudo=true CP118116.1 Protein Homology CDS 968119 969086 . - 0 ID=cds-PUW38_04595;Parent=gene-PUW38_04595;Note=frameshifted;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=PUW38_04595;product=thioredoxin-disulfide reductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 969632 970126 . + . ID=gene-PUW38_04600;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=PUW38_04600 CP118116.1 Protein Homology CDS 969632 970126 . + 0 ID=cds-WJG82027.1;Parent=gene-PUW38_04600;Dbxref=NCBI_GP:WJG82027.1;Name=WJG82027.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=PUW38_04600;product=leucine-responsive transcriptional regulator Lrp;protein_id=WJG82027.1;transl_table=11 CP118116.1 Genbank pseudogene 970261 974309 . + . ID=gene-PUW38_04605;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=PUW38_04605;pseudo=true CP118116.1 Protein Homology CDS 970261 974309 . + 0 ID=cds-PUW38_04605;Parent=gene-PUW38_04605;Note=frameshifted;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=PUW38_04605;product=DNA translocase FtsK;pseudo=true;transl_table=11 CP118116.1 Genbank gene 974452 975063 . + . ID=gene-PUW38_04610;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=PUW38_04610 CP118116.1 Protein Homology CDS 974452 975063 . + 0 ID=cds-WJG83169.1;Parent=gene-PUW38_04610;Dbxref=NCBI_GP:WJG83169.1;Name=WJG83169.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=PUW38_04610;product=outer membrane lipoprotein chaperone LolA;protein_id=WJG83169.1;transl_table=11 CP118116.1 Genbank gene 975073 976416 . + . ID=gene-PUW38_04615;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=PUW38_04615 CP118116.1 Protein Homology CDS 975073 976416 . + 0 ID=cds-WJG82028.1;Parent=gene-PUW38_04615;Dbxref=NCBI_GP:WJG82028.1;Name=WJG82028.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=PUW38_04615;product=replication-associated recombination protein RarA;protein_id=WJG82028.1;transl_table=11 CP118116.1 Genbank gene 976675 977967 . + . ID=gene-PUW38_04620;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=PUW38_04620 CP118116.1 Protein Homology CDS 976675 977967 . + 0 ID=cds-WJG82029.1;Parent=gene-PUW38_04620;Dbxref=NCBI_GP:WJG82029.1;Name=WJG82029.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=PUW38_04620;product=serine--tRNA ligase;protein_id=WJG82029.1;transl_table=11 CP118116.1 Genbank gene 978204 980648 . + . ID=gene-PUW38_04625;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=PUW38_04625 CP118116.1 Protein Homology CDS 978204 980648 . + 0 ID=cds-WJG82030.1;Parent=gene-PUW38_04625;Dbxref=NCBI_GP:WJG82030.1;Name=WJG82030.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=PUW38_04625;product=dimethylsulfoxide reductase subunit A;protein_id=WJG82030.1;transl_table=11 CP118116.1 Genbank gene 980659 981276 . + . ID=gene-PUW38_04630;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW38_04630 CP118116.1 Protein Homology CDS 980659 981276 . + 0 ID=cds-WJG82031.1;Parent=gene-PUW38_04630;Dbxref=NCBI_GP:WJG82031.1;Name=WJG82031.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PUW38_04630;product=dimethylsulfoxide reductase subunit B;protein_id=WJG82031.1;transl_table=11 CP118116.1 Genbank gene 981278 982141 . + . ID=gene-PUW38_04635;Name=PUW38_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04635 CP118116.1 Protein Homology CDS 981278 982141 . + 0 ID=cds-WJG82032.1;Parent=gene-PUW38_04635;Dbxref=NCBI_GP:WJG82032.1;Name=WJG82032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=PUW38_04635;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJG82032.1;transl_table=11 CP118116.1 Genbank gene 982491 983639 . + . ID=gene-PUW38_04640;Name=PUW38_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04640 CP118116.1 Protein Homology CDS 982491 983639 . + 0 ID=cds-WJG82033.1;Parent=gene-PUW38_04640;Dbxref=NCBI_GP:WJG82033.1;Name=WJG82033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=PUW38_04640;product=MFS transporter;protein_id=WJG82033.1;transl_table=11 CP118116.1 Genbank gene 983857 985278 . + . ID=gene-PUW38_04645;Name=PUW38_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04645 CP118116.1 Protein Homology CDS 983857 985278 . + 0 ID=cds-WJG82034.1;Parent=gene-PUW38_04645;Dbxref=NCBI_GP:WJG82034.1;Name=WJG82034.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=PUW38_04645;product=amino acid permease;protein_id=WJG82034.1;transl_table=11 CP118116.1 Genbank gene 985571 986368 . - . ID=gene-PUW38_04650;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=PUW38_04650 CP118116.1 Protein Homology CDS 985571 986368 . - 0 ID=cds-WJG82035.1;Parent=gene-PUW38_04650;Dbxref=NCBI_GP:WJG82035.1;Name=WJG82035.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=PUW38_04650;product=pyruvate formate lyase 1-activating protein;protein_id=WJG82035.1;transl_table=11 CP118116.1 Genbank gene 986487 986813 . - . ID=gene-PUW38_04655;Name=PUW38_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04655 CP118116.1 Protein Homology CDS 986487 986813 . - 0 ID=cds-WJG83170.1;Parent=gene-PUW38_04655;Dbxref=NCBI_GP:WJG83170.1;Name=WJG83170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=PUW38_04655;product=cytoplasmic protein;protein_id=WJG83170.1;transl_table=11 CP118116.1 Genbank gene 986943 987902 . + . ID=gene-PUW38_04660;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=PUW38_04660 CP118116.1 Protein Homology CDS 986943 987902 . + 0 ID=cds-WJG82036.1;Parent=gene-PUW38_04660;Dbxref=NCBI_GP:WJG82036.1;Name=WJG82036.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=PUW38_04660;product=SPI-2 type III secretion system effector SopD2;protein_id=WJG82036.1;transl_table=11 CP118116.1 Genbank pseudogene 987978 990258 . - . ID=gene-PUW38_04665;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=PUW38_04665;pseudo=true CP118116.1 Protein Homology CDS 987978 990258 . - 0 ID=cds-PUW38_04665;Parent=gene-PUW38_04665;Note=frameshifted;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=PUW38_04665;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 990318 991175 . - . ID=gene-PUW38_04670;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=PUW38_04670 CP118116.1 Protein Homology CDS 990318 991175 . - 0 ID=cds-WJG82037.1;Parent=gene-PUW38_04670;Dbxref=NCBI_GP:WJG82037.1;Name=WJG82037.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=PUW38_04670;product=formate transporter FocA;protein_id=WJG82037.1;transl_table=11 CP118116.1 Genbank gene 991580 993340 . - . ID=gene-PUW38_04675;Name=PUW38_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04675 CP118116.1 Protein Homology CDS 991580 993340 . - 0 ID=cds-WJG82038.1;Parent=gene-PUW38_04675;Dbxref=NCBI_GP:WJG82038.1;Name=WJG82038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=PUW38_04675;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WJG82038.1;transl_table=11 CP118116.1 Genbank gene 993477 994169 . + . ID=gene-PUW38_04680;Name=PUW38_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04680 CP118116.1 Protein Homology CDS 993477 994169 . + 0 ID=cds-WJG82039.1;Parent=gene-PUW38_04680;Dbxref=NCBI_GP:WJG82039.1;Name=WJG82039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=PUW38_04680;product=DUF421 domain-containing protein;protein_id=WJG82039.1;transl_table=11 CP118116.1 Genbank pseudogene 994355 995442 . + . ID=gene-PUW38_04685;Name=serC;gbkey=Gene;gene=serC;gene_biotype=pseudogene;locus_tag=PUW38_04685;pseudo=true CP118116.1 Protein Homology CDS 994355 995442 . + 0 ID=cds-PUW38_04685;Parent=gene-PUW38_04685;Note=frameshifted;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=PUW38_04685;product=3-phosphoserine/phosphohydroxythreonine transaminase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 995513 996796 . + . ID=gene-PUW38_04690;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=PUW38_04690 CP118116.1 Protein Homology CDS 995513 996796 . + 0 ID=cds-WJG82040.1;Parent=gene-PUW38_04690;Dbxref=NCBI_GP:WJG82040.1;Name=WJG82040.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=PUW38_04690;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WJG82040.1;transl_table=11 CP118116.1 Genbank gene 996939 997700 . + . ID=gene-PUW38_04695;Name=PUW38_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04695 CP118116.1 Protein Homology CDS 996939 997700 . + 0 ID=cds-WJG82041.1;Parent=gene-PUW38_04695;Dbxref=NCBI_GP:WJG82041.1;Name=WJG82041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=PUW38_04695;product=M48 family metallopeptidase;protein_id=WJG82041.1;transl_table=11 CP118116.1 Genbank gene 997873 998556 . + . ID=gene-PUW38_04700;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=PUW38_04700 CP118116.1 Protein Homology CDS 997873 998556 . + 0 ID=cds-WJG82042.1;Parent=gene-PUW38_04700;Dbxref=NCBI_GP:WJG82042.1;Name=WJG82042.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=PUW38_04700;product=(d)CMP kinase;protein_id=WJG82042.1;transl_table=11 CP118116.1 Genbank gene 998670 1000343 . + . ID=gene-PUW38_04705;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=PUW38_04705 CP118116.1 Protein Homology CDS 998670 1000343 . + 0 ID=cds-WJG82043.1;Parent=gene-PUW38_04705;Dbxref=NCBI_GP:WJG82043.1;Name=WJG82043.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=PUW38_04705;product=30S ribosomal protein S1;protein_id=WJG82043.1;transl_table=11 CP118116.1 Genbank gene 1000499 1000783 . + . ID=gene-PUW38_04710;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=PUW38_04710 CP118116.1 Protein Homology CDS 1000499 1000783 . + 0 ID=cds-WJG82044.1;Parent=gene-PUW38_04710;Dbxref=NCBI_GP:WJG82044.1;Name=WJG82044.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=PUW38_04710;product=integration host factor subunit beta;protein_id=WJG82044.1;transl_table=11 CP118116.1 Genbank gene 1001013 1003277 . + . ID=gene-PUW38_04715;Name=PUW38_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04715 CP118116.1 Protein Homology CDS 1001013 1003277 . + 0 ID=cds-WJG82045.1;Parent=gene-PUW38_04715;Dbxref=NCBI_GP:WJG82045.1;Name=WJG82045.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=PUW38_04715;product=ComEC family protein;protein_id=WJG82045.1;transl_table=11 CP118116.1 Genbank gene 1003314 1005062 . + . ID=gene-PUW38_04720;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=PUW38_04720 CP118116.1 Protein Homology CDS 1003314 1005062 . + 0 ID=cds-WJG82046.1;Parent=gene-PUW38_04720;Dbxref=NCBI_GP:WJG82046.1;Name=WJG82046.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=PUW38_04720;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WJG82046.1;transl_table=11 CP118116.1 Genbank gene 1005059 1006036 . + . ID=gene-PUW38_04725;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=PUW38_04725 CP118116.1 Protein Homology CDS 1005059 1006036 . + 0 ID=cds-WJG82047.1;Parent=gene-PUW38_04725;Dbxref=NCBI_GP:WJG82047.1;Name=WJG82047.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=PUW38_04725;product=tetraacyldisaccharide 4'-kinase;protein_id=WJG82047.1;transl_table=11 CP118116.1 Genbank gene 1006085 1007311 . + . ID=gene-PUW38_04730;Name=PUW38_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04730 CP118116.1 Protein Homology CDS 1006085 1007311 . + 0 ID=cds-WJG83171.1;Parent=gene-PUW38_04730;Dbxref=NCBI_GP:WJG83171.1;Name=WJG83171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=PUW38_04730;product=winged helix-turn-helix domain-containing protein;protein_id=WJG83171.1;transl_table=11 CP118116.1 Genbank gene 1007363 1007545 . + . ID=gene-PUW38_04735;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=PUW38_04735 CP118116.1 Protein Homology CDS 1007363 1007545 . + 0 ID=cds-WJG82048.1;Parent=gene-PUW38_04735;Dbxref=NCBI_GP:WJG82048.1;Name=WJG82048.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=PUW38_04735;product=protein YcaR;protein_id=WJG82048.1;transl_table=11 CP118116.1 Genbank gene 1007542 1008288 . + . ID=gene-PUW38_04740;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=PUW38_04740 CP118116.1 Protein Homology CDS 1007542 1008288 . + 0 ID=cds-WJG82049.1;Parent=gene-PUW38_04740;Dbxref=NCBI_GP:WJG82049.1;Name=WJG82049.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=PUW38_04740;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WJG82049.1;transl_table=11 CP118116.1 Genbank gene 1008499 1009392 . + . ID=gene-PUW38_04745;Name=PUW38_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04745 CP118116.1 Protein Homology CDS 1008499 1009392 . + 0 ID=cds-WJG82050.1;Parent=gene-PUW38_04745;Dbxref=NCBI_GP:WJG82050.1;Name=WJG82050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=PUW38_04745;product=YcbJ family phosphotransferase;protein_id=WJG82050.1;transl_table=11 CP118116.1 Genbank gene 1009372 1010148 . - . ID=gene-PUW38_04750;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=PUW38_04750 CP118116.1 Protein Homology CDS 1009372 1010148 . - 0 ID=cds-WJG82051.1;Parent=gene-PUW38_04750;Dbxref=NCBI_GP:WJG82051.1;Name=WJG82051.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=PUW38_04750;product=envelope biogenesis factor ElyC;protein_id=WJG82051.1;transl_table=11 CP118116.1 Genbank pseudogene 1010284 1011086 . + . ID=gene-PUW38_04755;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=pseudogene;locus_tag=PUW38_04755;pseudo=true CP118116.1 Protein Homology CDS 1010284 1011086 . + 0 ID=cds-PUW38_04755;Parent=gene-PUW38_04755;Note=frameshifted;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=PUW38_04755;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1011079 1012401 . + . ID=gene-PUW38_04760;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=PUW38_04760 CP118116.1 Protein Homology CDS 1011079 1012401 . + 0 ID=cds-WJG82052.1;Parent=gene-PUW38_04760;Dbxref=NCBI_GP:WJG82052.1;Name=WJG82052.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=PUW38_04760;product=chromosome partition protein MukF;protein_id=WJG82052.1;transl_table=11 CP118116.1 Genbank gene 1012382 1013086 . + . ID=gene-PUW38_04765;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=PUW38_04765 CP118116.1 Protein Homology CDS 1012382 1013086 . + 0 ID=cds-WJG82053.1;Parent=gene-PUW38_04765;Dbxref=NCBI_GP:WJG82053.1;Name=WJG82053.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=PUW38_04765;product=chromosome partition protein MukE;protein_id=WJG82053.1;transl_table=11 CP118116.1 Genbank gene 1013086 1017552 . + . ID=gene-PUW38_04770;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=PUW38_04770 CP118116.1 Protein Homology CDS 1013086 1017552 . + 0 ID=cds-WJG82054.1;Parent=gene-PUW38_04770;Dbxref=NCBI_GP:WJG82054.1;Name=WJG82054.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=PUW38_04770;product=chromosome partition protein MukB;protein_id=WJG82054.1;transl_table=11 CP118116.1 Genbank gene 1017897 1019747 . + . ID=gene-PUW38_04775;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=PUW38_04775 CP118116.1 Protein Homology CDS 1017897 1019747 . + 0 ID=cds-WJG82055.1;Parent=gene-PUW38_04775;Dbxref=NCBI_GP:WJG82055.1;Name=WJG82055.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=PUW38_04775;product=L%2CD-transpeptidase;protein_id=WJG82055.1;transl_table=11 CP118116.1 Genbank gene 1020007 1020555 . + . ID=gene-PUW38_04780;Name=PUW38_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04780 CP118116.1 Protein Homology CDS 1020007 1020555 . + 0 ID=cds-WJG82056.1;Parent=gene-PUW38_04780;Dbxref=NCBI_GP:WJG82056.1;Name=WJG82056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=PUW38_04780;product=YcbK family protein;protein_id=WJG82056.1;transl_table=11 CP118116.1 Genbank gene 1020583 1021230 . + . ID=gene-PUW38_04785;Name=PUW38_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04785 CP118116.1 Protein Homology CDS 1020583 1021230 . + 0 ID=cds-WJG82057.1;Parent=gene-PUW38_04785;Dbxref=NCBI_GP:WJG82057.1;Name=WJG82057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=PUW38_04785;product=MBL fold metallo-hydrolase;protein_id=WJG82057.1;transl_table=11 CP118116.1 Genbank pseudogene 1021292 1022481 . - . ID=gene-PUW38_04790;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=pseudogene;locus_tag=PUW38_04790;pseudo=true CP118116.1 Protein Homology CDS 1021292 1022481 . - 0 ID=cds-PUW38_04790;Parent=gene-PUW38_04790;Note=frameshifted;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=PUW38_04790;product=aspartate transaminase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1022666 1023757 . - . ID=gene-PUW38_04795;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=PUW38_04795 CP118116.1 Protein Homology CDS 1022666 1023757 . - 0 ID=cds-WJG82058.1;Parent=gene-PUW38_04795;Dbxref=NCBI_GP:WJG82058.1;Name=WJG82058.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=PUW38_04795;product=porin OmpF;protein_id=WJG82058.1;transl_table=11 CP118116.1 Genbank gene 1024351 1025751 . - . ID=gene-PUW38_04800;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=PUW38_04800 CP118116.1 Protein Homology CDS 1024351 1025751 . - 0 ID=cds-WJG82059.1;Parent=gene-PUW38_04800;Dbxref=NCBI_GP:WJG82059.1;Name=WJG82059.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=PUW38_04800;product=asparagine--tRNA ligase;protein_id=WJG82059.1;transl_table=11 CP118116.1 Genbank gene 1025952 1026413 . - . ID=gene-PUW38_04805;Name=PUW38_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04805 CP118116.1 Protein Homology CDS 1025952 1026413 . - 0 ID=cds-WJG82060.1;Parent=gene-PUW38_04805;Dbxref=NCBI_GP:WJG82060.1;Name=WJG82060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=PUW38_04805;product=Lrp/AsnC family transcriptional regulator;protein_id=WJG82060.1;transl_table=11 CP118116.1 Genbank gene 1026731 1027945 . + . ID=gene-PUW38_04810;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=PUW38_04810 CP118116.1 Protein Homology CDS 1026731 1027945 . + 0 ID=cds-WJG82061.1;Parent=gene-PUW38_04810;Dbxref=NCBI_GP:WJG82061.1;Name=WJG82061.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=PUW38_04810;product=diaminopropionate ammonia-lyase;protein_id=WJG82061.1;transl_table=11 CP118116.1 Genbank gene 1028189 1029625 . + . ID=gene-PUW38_04815;Name=PUW38_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04815 CP118116.1 Protein Homology CDS 1028189 1029625 . + 0 ID=cds-WJG82062.1;Parent=gene-PUW38_04815;Dbxref=NCBI_GP:WJG82062.1;Name=WJG82062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459978.1;locus_tag=PUW38_04815;product=sodium:alanine symporter family protein;protein_id=WJG82062.1;transl_table=11 CP118116.1 Genbank gene 1029703 1030905 . - . ID=gene-PUW38_04820;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=PUW38_04820 CP118116.1 Protein Homology CDS 1029703 1030905 . - 0 ID=cds-WJG82063.1;Parent=gene-PUW38_04820;Dbxref=NCBI_GP:WJG82063.1;Name=WJG82063.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=PUW38_04820;product=nicotinate phosphoribosyltransferase;protein_id=WJG82063.1;transl_table=11 CP118116.1 Genbank gene 1031172 1033784 . + . ID=gene-PUW38_04825;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=PUW38_04825 CP118116.1 Protein Homology CDS 1031172 1033784 . + 0 ID=cds-WJG82064.1;Parent=gene-PUW38_04825;Dbxref=NCBI_GP:WJG82064.1;Name=WJG82064.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=PUW38_04825;product=aminopeptidase N;protein_id=WJG82064.1;transl_table=11 CP118116.1 Genbank gene 1033992 1035002 . + . ID=gene-PUW38_04830;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=PUW38_04830 CP118116.1 Protein Homology CDS 1033992 1035002 . + 0 ID=cds-WJG82065.1;Parent=gene-PUW38_04830;Dbxref=NCBI_GP:WJG82065.1;Name=WJG82065.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=PUW38_04830;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WJG82065.1;transl_table=11 CP118116.1 Genbank gene 1035168 1035710 . + . ID=gene-PUW38_04835;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=PUW38_04835 CP118116.1 Protein Homology CDS 1035168 1035710 . + 0 ID=cds-WJG82066.1;Parent=gene-PUW38_04835;Dbxref=NCBI_GP:WJG82066.1;Name=WJG82066.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=PUW38_04835;product=cell division protein ZapC;protein_id=WJG82066.1;transl_table=11 CP118116.1 Genbank pseudogene 1035707 1036815 . - . ID=gene-PUW38_04840;Name=PUW38_04840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04840;pseudo=true CP118116.1 Protein Homology CDS 1035707 1036815 . - 0 ID=cds-PUW38_04840;Parent=gene-PUW38_04840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=PUW38_04840;product=YcbX family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1036914 1039022 . + . ID=gene-PUW38_04845;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=PUW38_04845 CP118116.1 Protein Homology CDS 1036914 1039022 . + 0 ID=cds-WJG82067.1;Parent=gene-PUW38_04845;Dbxref=NCBI_GP:WJG82067.1;Name=WJG82067.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=PUW38_04845;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WJG82067.1;transl_table=11 CP118116.1 Genbank gene 1039035 1040963 . + . ID=gene-PUW38_04850;Name=PUW38_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04850 CP118116.1 Protein Homology CDS 1039035 1040963 . + 0 ID=cds-WJG82068.1;Parent=gene-PUW38_04850;Dbxref=NCBI_GP:WJG82068.1;Name=WJG82068.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226158.1;locus_tag=PUW38_04850;product=ABC transporter ATP-binding protein;protein_id=WJG82068.1;transl_table=11 CP118116.1 Genbank gene 1040956 1042209 . + . ID=gene-PUW38_04855;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=PUW38_04855 CP118116.1 Protein Homology CDS 1040956 1042209 . + 0 ID=cds-WJG82069.1;Parent=gene-PUW38_04855;Dbxref=NCBI_GP:WJG82069.1;Name=WJG82069.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=PUW38_04855;product=membrane integrity-associated transporter subunit PqiA;protein_id=WJG82069.1;transl_table=11 CP118116.1 Genbank gene 1042214 1043854 . + . ID=gene-PUW38_04860;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=PUW38_04860 CP118116.1 Protein Homology CDS 1042214 1043854 . + 0 ID=cds-WJG82070.1;Parent=gene-PUW38_04860;Dbxref=NCBI_GP:WJG82070.1;Name=WJG82070.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=PUW38_04860;product=intermembrane transport protein PqiB;protein_id=WJG82070.1;transl_table=11 CP118116.1 Genbank gene 1043851 1044414 . + . ID=gene-PUW38_04865;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=PUW38_04865 CP118116.1 Protein Homology CDS 1043851 1044414 . + 0 ID=cds-WJG82071.1;Parent=gene-PUW38_04865;Dbxref=NCBI_GP:WJG82071.1;Name=WJG82071.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=PUW38_04865;product=membrane integrity-associated transporter subunit PqiC;protein_id=WJG82071.1;transl_table=11 CP118116.1 Genbank gene 1044670 1044837 . + . ID=gene-PUW38_04870;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=PUW38_04870 CP118116.1 Protein Homology CDS 1044670 1044837 . + 0 ID=cds-WJG82072.1;Parent=gene-PUW38_04870;Dbxref=NCBI_GP:WJG82072.1;Name=WJG82072.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=PUW38_04870;product=ribosome modulation factor;protein_id=WJG82072.1;transl_table=11 CP118116.1 Genbank gene 1044937 1045455 . - . ID=gene-PUW38_04875;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=PUW38_04875 CP118116.1 Protein Homology CDS 1044937 1045455 . - 0 ID=cds-WJG82073.1;Parent=gene-PUW38_04875;Dbxref=NCBI_GP:WJG82073.1;Name=WJG82073.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=PUW38_04875;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WJG82073.1;transl_table=11 CP118116.1 Genbank gene 1045524 1047284 . - . ID=gene-PUW38_04880;Name=PUW38_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04880 CP118116.1 Protein Homology CDS 1045524 1047284 . - 0 ID=cds-WJG82074.1;Parent=gene-PUW38_04880;Dbxref=NCBI_GP:WJG82074.1;Name=WJG82074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=PUW38_04880;product=Lon protease family protein;protein_id=WJG82074.1;transl_table=11 CP118116.1 Genbank gene 1047470 1047922 . + . ID=gene-PUW38_04885;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=PUW38_04885 CP118116.1 Protein Homology CDS 1047470 1047922 . + 0 ID=cds-WJG82075.1;Parent=gene-PUW38_04885;Dbxref=NCBI_GP:WJG82075.1;Name=WJG82075.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=PUW38_04885;product=macrodomain Ter protein MatP;protein_id=WJG82075.1;transl_table=11 CP118116.1 Genbank gene 1047994 1049046 . - . ID=gene-PUW38_04890;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=PUW38_04890 CP118116.1 Protein Homology CDS 1047994 1049046 . - 0 ID=cds-WJG82076.1;Parent=gene-PUW38_04890;Dbxref=NCBI_GP:WJG82076.1;Name=WJG82076.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=PUW38_04890;product=porin OmpA;protein_id=WJG82076.1;transl_table=11 CP118116.1 Genbank gene 1049403 1049912 . - . ID=gene-PUW38_04895;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=PUW38_04895 CP118116.1 Protein Homology CDS 1049403 1049912 . - 0 ID=cds-WJG82077.1;Parent=gene-PUW38_04895;Dbxref=NCBI_GP:WJG82077.1;Name=WJG82077.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=PUW38_04895;product=cell division inhibitor SulA;protein_id=WJG82077.1;transl_table=11 CP118116.1 Genbank gene 1050129 1050734 . + . ID=gene-PUW38_04900;Name=PUW38_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04900 CP118116.1 Protein Homology CDS 1050129 1050734 . + 0 ID=cds-WJG82078.1;Parent=gene-PUW38_04900;Dbxref=NCBI_GP:WJG82078.1;Name=WJG82078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=PUW38_04900;product=TfoX/Sxy family DNA transformation protein;protein_id=WJG82078.1;transl_table=11 CP118116.1 Genbank gene 1050721 1052874 . - . ID=gene-PUW38_04905;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=PUW38_04905 CP118116.1 Protein Homology CDS 1050721 1052874 . - 0 ID=cds-WJG82079.1;Parent=gene-PUW38_04905;Dbxref=NCBI_GP:WJG82079.1;Name=WJG82079.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=PUW38_04905;product=YccS family putative transporter;protein_id=WJG82079.1;transl_table=11 CP118116.1 Genbank gene 1052893 1053339 . - . ID=gene-PUW38_04910;Name=PUW38_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04910 CP118116.1 Protein Homology CDS 1052893 1053339 . - 0 ID=cds-WJG82080.1;Parent=gene-PUW38_04910;Dbxref=NCBI_GP:WJG82080.1;Name=WJG82080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=PUW38_04910;product=YccF domain-containing protein;protein_id=WJG82080.1;transl_table=11 CP118116.1 Genbank gene 1053463 1055517 . + . ID=gene-PUW38_04915;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=PUW38_04915 CP118116.1 Protein Homology CDS 1053463 1055517 . + 0 ID=cds-WJG82081.1;Parent=gene-PUW38_04915;Dbxref=NCBI_GP:WJG82081.1;Name=WJG82081.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=PUW38_04915;product=DNA helicase IV;protein_id=WJG82081.1;transl_table=11 CP118116.1 Genbank gene 1055553 1056011 . - . ID=gene-PUW38_04920;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=PUW38_04920 CP118116.1 Protein Homology CDS 1055553 1056011 . - 0 ID=cds-WJG82082.1;Parent=gene-PUW38_04920;Dbxref=NCBI_GP:WJG82082.1;Name=WJG82082.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=PUW38_04920;product=methylglyoxal synthase;protein_id=WJG82082.1;transl_table=11 CP118116.1 Genbank pseudogene 1056106 1056441 . - . ID=gene-PUW38_04925;Name=PUW38_04925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04925;pseudo=true CP118116.1 Protein Homology CDS 1056106 1056441 . - 0 ID=cds-PUW38_04925;Parent=gene-PUW38_04925;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021358.2;locus_tag=PUW38_04925;product=DUF2057 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1056384 1056767 . - . ID=gene-PUW38_04930;Name=PUW38_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04930 CP118116.1 Protein Homology CDS 1056384 1056767 . - 0 ID=cds-WJG82083.1;Parent=gene-PUW38_04930;Dbxref=NCBI_GP:WJG82083.1;Name=WJG82083.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF002967.0;locus_tag=PUW38_04930;product=DUF2057 family protein;protein_id=WJG82083.1;transl_table=11 CP118116.1 Genbank gene 1056941 1057354 . + . ID=gene-PUW38_04935;Name=PUW38_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04935 CP118116.1 Protein Homology CDS 1056941 1057354 . + 0 ID=cds-WJG83172.1;Parent=gene-PUW38_04935;Dbxref=NCBI_GP:WJG83172.1;Name=WJG83172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=PUW38_04935;product=CoA-binding protein;protein_id=WJG83172.1;transl_table=11 CP118116.1 Genbank gene 1057399 1057716 . - . ID=gene-PUW38_04940;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=PUW38_04940 CP118116.1 Protein Homology CDS 1057399 1057716 . - 0 ID=cds-WJG82084.1;Parent=gene-PUW38_04940;Dbxref=NCBI_GP:WJG82084.1;Name=WJG82084.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=PUW38_04940;product=heat shock protein HspQ;protein_id=WJG82084.1;transl_table=11 CP118116.1 Genbank gene 1057774 1058985 . - . ID=gene-PUW38_04945;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=PUW38_04945 CP118116.1 Protein Homology CDS 1057774 1058985 . - 0 ID=cds-WJG82085.1;Parent=gene-PUW38_04945;Dbxref=NCBI_GP:WJG82085.1;Name=WJG82085.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=PUW38_04945;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WJG82085.1;transl_table=11 CP118116.1 Genbank pseudogene 1059200 1059747 . + . ID=gene-PUW38_04950;Name=PUW38_04950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_04950;pseudo=true CP118116.1 Protein Homology CDS 1059200 1059747 . + 0 ID=cds-PUW38_04950;Parent=gene-PUW38_04950;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=PUW38_04950;product=YbhB/YbcL family Raf kinase inhibitor-like protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1059773 1060552 . + . ID=gene-PUW38_04955;Name=PUW38_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04955 CP118116.1 Protein Homology CDS 1059773 1060552 . + 0 ID=cds-WJG82086.1;Parent=gene-PUW38_04955;Dbxref=NCBI_GP:WJG82086.1;Name=WJG82086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=PUW38_04955;product=AraC family transcriptional regulator;protein_id=WJG82086.1;transl_table=11 CP118116.1 Genbank gene 1060601 1060882 . + . ID=gene-PUW38_04960;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=PUW38_04960 CP118116.1 Protein Homology CDS 1060601 1060882 . + 0 ID=cds-WJG82087.1;Parent=gene-PUW38_04960;Dbxref=NCBI_GP:WJG82087.1;Name=WJG82087.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=PUW38_04960;product=acylphosphatase;protein_id=WJG82087.1;transl_table=11 CP118116.1 Genbank gene 1060879 1061208 . - . ID=gene-PUW38_04965;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=PUW38_04965 CP118116.1 Protein Homology CDS 1060879 1061208 . - 0 ID=cds-WJG82088.1;Parent=gene-PUW38_04965;Dbxref=NCBI_GP:WJG82088.1;Name=WJG82088.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=PUW38_04965;product=sulfurtransferase TusE;protein_id=WJG82088.1;transl_table=11 CP118116.1 Genbank gene 1061295 1061954 . - . ID=gene-PUW38_04970;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=PUW38_04970 CP118116.1 Protein Homology CDS 1061295 1061954 . - 0 ID=cds-WJG82089.1;Parent=gene-PUW38_04970;Dbxref=NCBI_GP:WJG82089.1;Name=WJG82089.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=PUW38_04970;product=FtsH protease modulator YccA;protein_id=WJG82089.1;transl_table=11 CP118116.1 Genbank gene 1062349 1062436 . + . ID=gene-PUW38_04975;Name=PUW38_04975;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_04975 CP118116.1 tRNAscan-SE tRNA 1062349 1062436 . + . ID=rna-PUW38_04975;Parent=gene-PUW38_04975;anticodon=(pos:1062383..1062385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_04975;product=tRNA-Ser CP118116.1 tRNAscan-SE exon 1062349 1062436 . + . ID=exon-PUW38_04975-1;Parent=rna-PUW38_04975;anticodon=(pos:1062383..1062385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_04975;product=tRNA-Ser CP118116.1 Genbank gene 1062573 1063253 . - . ID=gene-PUW38_04980;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=PUW38_04980 CP118116.1 Protein Homology CDS 1062573 1063253 . - 0 ID=cds-WJG82090.1;Parent=gene-PUW38_04980;Dbxref=NCBI_GP:WJG82090.1;Name=WJG82090.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=PUW38_04980;product=type III secretion system effector protease PipA;protein_id=WJG82090.1;transl_table=11 CP118116.1 Genbank gene 1063473 1064348 . - . ID=gene-PUW38_04985;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=PUW38_04985 CP118116.1 Protein Homology CDS 1063473 1064348 . - 0 ID=cds-WJG82091.1;Parent=gene-PUW38_04985;Dbxref=NCBI_GP:WJG82091.1;Name=WJG82091.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=PUW38_04985;product=SPI-2 type III secretion system effector PipB;protein_id=WJG82091.1;transl_table=11 CP118116.1 Genbank gene 1064566 1064886 . + . ID=gene-PUW38_04990;Name=PUW38_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_04990 CP118116.1 Protein Homology CDS 1064566 1064886 . + 0 ID=cds-WJG82092.1;Parent=gene-PUW38_04990;Dbxref=NCBI_GP:WJG82092.1;Name=WJG82092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=PUW38_04990;product=hypothetical protein;protein_id=WJG82092.1;transl_table=11 CP118116.1 Genbank gene 1064896 1065237 . - . ID=gene-PUW38_04995;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=PUW38_04995 CP118116.1 Protein Homology CDS 1064896 1065237 . - 0 ID=cds-WJG82093.1;Parent=gene-PUW38_04995;Dbxref=NCBI_GP:WJG82093.1;Name=WJG82093.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=PUW38_04995;product=type III secretion system chaperone SigE;protein_id=WJG82093.1;transl_table=11 CP118116.1 Genbank gene 1065254 1066939 . - . ID=gene-PUW38_05000;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=PUW38_05000 CP118116.1 Protein Homology CDS 1065254 1066939 . - 0 ID=cds-WJG83173.1;Parent=gene-PUW38_05000;Dbxref=NCBI_GP:WJG83173.1;Name=WJG83173.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=PUW38_05000;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WJG83173.1;transl_table=11 CP118116.1 Genbank gene 1067271 1067441 . + . ID=gene-PUW38_05005;Name=PUW38_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05005 CP118116.1 Protein Homology CDS 1067271 1067441 . + 0 ID=cds-WJG82094.1;Parent=gene-PUW38_05005;Dbxref=NCBI_GP:WJG82094.1;Name=WJG82094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=PUW38_05005;product=YlcI/YnfO family protein;protein_id=WJG82094.1;transl_table=11 CP118116.1 Genbank gene 1067442 1067552 . - . ID=gene-PUW38_05010;Name=PUW38_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05010 CP118116.1 Protein Homology CDS 1067442 1067552 . - 0 ID=cds-WJG82095.1;Parent=gene-PUW38_05010;Dbxref=NCBI_GP:WJG82095.1;Name=WJG82095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=PUW38_05010;product=hypothetical protein;protein_id=WJG82095.1;transl_table=11 CP118116.1 Genbank gene 1067661 1069130 . - . ID=gene-PUW38_05015;Name=PUW38_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05015 CP118116.1 Protein Homology CDS 1067661 1069130 . - 0 ID=cds-WJG82096.1;Parent=gene-PUW38_05015;Dbxref=NCBI_GP:WJG82096.1;Name=WJG82096.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=PUW38_05015;product=C69 family dipeptidase;protein_id=WJG82096.1;transl_table=11 CP118116.1 Genbank gene 1069303 1070667 . - . ID=gene-PUW38_05020;Name=PUW38_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05020 CP118116.1 Protein Homology CDS 1069303 1070667 . - 0 ID=cds-WJG82097.1;Parent=gene-PUW38_05020;Dbxref=NCBI_GP:WJG82097.1;Name=WJG82097.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=PUW38_05020;product=heavy metal sensor histidine kinase;protein_id=WJG82097.1;transl_table=11 CP118116.1 Genbank gene 1070660 1071340 . - . ID=gene-PUW38_05025;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=PUW38_05025 CP118116.1 Protein Homology CDS 1070660 1071340 . - 0 ID=cds-WJG82098.1;Parent=gene-PUW38_05025;Dbxref=NCBI_GP:WJG82098.1;Name=WJG82098.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=PUW38_05025;product=response regulator transcription factor HprR;protein_id=WJG82098.1;transl_table=11 CP118116.1 Genbank gene 1071476 1071886 . + . ID=gene-PUW38_05030;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=PUW38_05030 CP118116.1 Protein Homology CDS 1071476 1071886 . + 0 ID=cds-WJG82099.1;Parent=gene-PUW38_05030;Dbxref=NCBI_GP:WJG82099.1;Name=WJG82099.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=PUW38_05030;product=hydroxyisourate hydrolase;protein_id=WJG82099.1;transl_table=11 CP118116.1 Genbank gene 1072219 1072731 . - . ID=gene-PUW38_05035;Name=PUW38_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05035 CP118116.1 Protein Homology CDS 1072219 1072731 . - 0 ID=cds-WJG82100.1;Parent=gene-PUW38_05035;Dbxref=NCBI_GP:WJG82100.1;Name=WJG82100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=PUW38_05035;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WJG82100.1;transl_table=11 CP118116.1 Genbank gene 1072749 1074311 . - . ID=gene-PUW38_05040;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=PUW38_05040 CP118116.1 Protein Homology CDS 1072749 1074311 . - 0 ID=cds-WJG82101.1;Parent=gene-PUW38_05040;Dbxref=NCBI_GP:WJG82101.1;Name=WJG82101.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=PUW38_05040;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WJG82101.1;transl_table=11 CP118116.1 Genbank gene 1074528 1074968 . - . ID=gene-PUW38_05045;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=PUW38_05045 CP118116.1 Protein Homology CDS 1074528 1074968 . - 0 ID=cds-WJG82102.1;Parent=gene-PUW38_05045;Dbxref=NCBI_GP:WJG82102.1;Name=WJG82102.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=PUW38_05045;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WJG82102.1;transl_table=11 CP118116.1 Genbank gene 1075243 1076532 . + . ID=gene-PUW38_05050;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=PUW38_05050 CP118116.1 Protein Homology CDS 1075243 1076532 . + 0 ID=cds-WJG82103.1;Parent=gene-PUW38_05050;Dbxref=NCBI_GP:WJG82103.1;Name=WJG82103.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=PUW38_05050;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WJG82103.1;transl_table=11 CP118116.1 Genbank pseudogene 1076529 1077994 . + . ID=gene-PUW38_05055;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=pseudogene;locus_tag=PUW38_05055;pseudo=true CP118116.1 Protein Homology CDS 1076529 1077994 . + 0 ID=cds-PUW38_05055;Parent=gene-PUW38_05055;Note=frameshifted;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=PUW38_05055;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1077996 1078847 . + . ID=gene-PUW38_05060;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=PUW38_05060 CP118116.1 Protein Homology CDS 1077996 1078847 . + 0 ID=cds-WJG82104.1;Parent=gene-PUW38_05060;Dbxref=NCBI_GP:WJG82104.1;Name=WJG82104.1;Ontology_term=GO:0006725,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=PUW38_05060;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WJG82104.1;transl_table=11 CP118116.1 Genbank gene 1078857 1079237 . + . ID=gene-PUW38_05065;Name=PUW38_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05065 CP118116.1 Protein Homology CDS 1078857 1079237 . + 0 ID=cds-WJG82105.1;Parent=gene-PUW38_05065;Dbxref=NCBI_GP:WJG82105.1;Name=WJG82105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=PUW38_05065;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WJG82105.1;transl_table=11 CP118116.1 Genbank pseudogene 1079380 1080182 . + . ID=gene-PUW38_05070;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=pseudogene;locus_tag=PUW38_05070;pseudo=true CP118116.1 Protein Homology CDS 1079380 1080182 . + 0 ID=cds-PUW38_05070;Parent=gene-PUW38_05070;Note=frameshifted;Ontology_term=GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=PUW38_05070;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1080193 1080984 . + . ID=gene-PUW38_05075;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=PUW38_05075 CP118116.1 Protein Homology CDS 1080193 1080984 . + 0 ID=cds-WJG82106.1;Parent=gene-PUW38_05075;Dbxref=NCBI_GP:WJG82106.1;Name=WJG82106.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=PUW38_05075;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WJG82106.1;transl_table=11 CP118116.1 Genbank gene 1081056 1082432 . + . ID=gene-PUW38_05080;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=PUW38_05080 CP118116.1 Protein Homology CDS 1081056 1082432 . + 0 ID=cds-WJG82107.1;Parent=gene-PUW38_05080;Dbxref=NCBI_GP:WJG82107.1;Name=WJG82107.1;Ontology_term=GO:0055085,GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=transmembrane transport|0055085||IEA,4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=PUW38_05080;product=4-hydroxyphenylacetate permease;protein_id=WJG82107.1;transl_table=11 CP118116.1 Genbank gene 1082442 1083338 . + . ID=gene-PUW38_05085;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=PUW38_05085 CP118116.1 Protein Homology CDS 1082442 1083338 . + 0 ID=cds-WJG82108.1;Parent=gene-PUW38_05085;Dbxref=NCBI_GP:WJG82108.1;Name=WJG82108.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=PUW38_05085;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WJG82108.1;transl_table=11 CP118116.1 Genbank gene 1083352 1084290 . + . ID=gene-PUW38_05090;Name=PUW38_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05090 CP118116.1 Protein Homology CDS 1083352 1084290 . + 0 ID=cds-WJG82109.1;Parent=gene-PUW38_05090;Dbxref=NCBI_GP:WJG82109.1;Name=WJG82109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=PUW38_05090;product=MBL fold metallo-hydrolase;protein_id=WJG82109.1;transl_table=11 CP118116.1 Genbank gene 1084698 1085060 . - . ID=gene-PUW38_05095;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=PUW38_05095 CP118116.1 Protein Homology CDS 1084698 1085060 . - 0 ID=cds-WJG82110.1;Parent=gene-PUW38_05095;Dbxref=NCBI_GP:WJG82110.1;Name=WJG82110.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=PUW38_05095;product=anti-adapter protein IraM;protein_id=WJG82110.1;transl_table=11 CP118116.1 Genbank gene 1085714 1086019 . - . ID=gene-PUW38_05100;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=PUW38_05100 CP118116.1 Protein Homology CDS 1085714 1086019 . - 0 ID=cds-WJG82111.1;Parent=gene-PUW38_05100;Dbxref=NCBI_GP:WJG82111.1;Name=WJG82111.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=PUW38_05100;product=chaperone modulator CbpM;protein_id=WJG82111.1;transl_table=11 CP118116.1 Genbank gene 1086019 1086939 . - . ID=gene-PUW38_05105;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=PUW38_05105 CP118116.1 Protein Homology CDS 1086019 1086939 . - 0 ID=cds-WJG82112.1;Parent=gene-PUW38_05105;Dbxref=NCBI_GP:WJG82112.1;Name=WJG82112.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=PUW38_05105;product=curved DNA-binding protein;protein_id=WJG82112.1;transl_table=11 CP118116.1 Genbank gene 1087175 1087537 . + . ID=gene-PUW38_05110;Name=PUW38_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05110 CP118116.1 Protein Homology CDS 1087175 1087537 . + 0 ID=cds-WJG82113.1;Parent=gene-PUW38_05110;Dbxref=NCBI_GP:WJG82113.1;Name=WJG82113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=PUW38_05110;product=copper resistance protein;protein_id=WJG82113.1;transl_table=11 CP118116.1 Genbank gene 1087586 1089472 . + . ID=gene-PUW38_05115;Name=PUW38_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05115 CP118116.1 Protein Homology CDS 1087586 1089472 . + 0 ID=cds-WJG82114.1;Parent=gene-PUW38_05115;Dbxref=NCBI_GP:WJG82114.1;Name=WJG82114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=PUW38_05115;product=protein-disulfide reductase DsbD family protein;protein_id=WJG82114.1;transl_table=11 CP118116.1 Genbank gene 1089469 1090092 . + . ID=gene-PUW38_05120;Name=PUW38_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05120 CP118116.1 Protein Homology CDS 1089469 1090092 . + 0 ID=cds-WJG82115.1;Parent=gene-PUW38_05120;Dbxref=NCBI_GP:WJG82115.1;Name=WJG82115.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=PUW38_05120;product=DsbA family protein;protein_id=WJG82115.1;transl_table=11 CP118116.1 Genbank pseudogene 1090082 1090586 . + . ID=gene-PUW38_05125;Name=PUW38_05125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05125;pseudo=true CP118116.1 Protein Homology CDS 1090082 1090586 . + 0 ID=cds-PUW38_05125;Parent=gene-PUW38_05125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=PUW38_05125;product=protein disulfide oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1090719 1091960 . + . ID=gene-PUW38_05130;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=PUW38_05130 CP118116.1 Protein Homology CDS 1090719 1091960 . + 0 ID=cds-WJG82116.1;Parent=gene-PUW38_05130;Dbxref=NCBI_GP:WJG82116.1;Name=WJG82116.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=PUW38_05130;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WJG82116.1;transl_table=11 CP118116.1 Genbank pseudogene 1091994 1092220 . - . ID=gene-PUW38_05135;Name=PUW38_05135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05135;pseudo=true CP118116.1 Protein Homology CDS 1091994 1092220 . - 0 ID=cds-PUW38_05135;Parent=gene-PUW38_05135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=PUW38_05135;product=YccJ family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1092241 1092837 . - . ID=gene-PUW38_05140;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=PUW38_05140 CP118116.1 Protein Homology CDS 1092241 1092837 . - 0 ID=cds-WJG82117.1;Parent=gene-PUW38_05140;Dbxref=NCBI_GP:WJG82117.1;Name=WJG82117.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=PUW38_05140;product=NAD(P)H:quinone oxidoreductase;protein_id=WJG82117.1;transl_table=11 CP118116.1 Genbank gene 1093222 1093389 . + . ID=gene-PUW38_05145;Name=PUW38_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05145 CP118116.1 Protein Homology CDS 1093222 1093389 . + 0 ID=cds-WJG82118.1;Parent=gene-PUW38_05145;Dbxref=NCBI_GP:WJG82118.1;Name=WJG82118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=PUW38_05145;product=general stress protein;protein_id=WJG82118.1;transl_table=11 CP118116.1 Genbank pseudogene 1093416 1093808 . + . ID=gene-PUW38_05150;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=pseudogene;locus_tag=PUW38_05150;pseudo=true CP118116.1 Protein Homology CDS 1093416 1093808 . + 0 ID=cds-PUW38_05150;Parent=gene-PUW38_05150;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=PUW38_05150;product=HTH-type transcriptional regulator RutR;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1093805 1094200 . - . ID=gene-PUW38_05155;Name=PUW38_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05155 CP118116.1 Protein Homology CDS 1093805 1094200 . - 0 ID=cds-WJG82119.1;Parent=gene-PUW38_05155;Dbxref=NCBI_GP:WJG82119.1;Name=WJG82119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=PUW38_05155;product=lysozyme inhibitor LprI family protein;protein_id=WJG82119.1;transl_table=11 CP118116.1 Genbank pseudogene 1094259 1098220 . - . ID=gene-PUW38_05160;Name=putA;gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=PUW38_05160;pseudo=true CP118116.1 Protein Homology CDS 1094259 1098220 . - 0 ID=cds-PUW38_05160;Parent=gene-PUW38_05160;Note=frameshifted;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=PUW38_05160;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1098642 1100150 . + . ID=gene-PUW38_05165;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=PUW38_05165 CP118116.1 Protein Homology CDS 1098642 1100150 . + 0 ID=cds-WJG82120.1;Parent=gene-PUW38_05165;Dbxref=NCBI_GP:WJG82120.1;Name=WJG82120.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=PUW38_05165;product=sodium/proline symporter PutP;protein_id=WJG82120.1;transl_table=11 CP118116.1 Genbank gene 1101042 1101830 . + . ID=gene-PUW38_05170;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=PUW38_05170 CP118116.1 Protein Homology CDS 1101042 1101830 . + 0 ID=cds-WJG82121.1;Parent=gene-PUW38_05170;Dbxref=NCBI_GP:WJG82121.1;Name=WJG82121.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=PUW38_05170;product=phosphate starvation-inducible protein PhoH;protein_id=WJG82121.1;transl_table=11 CP118116.1 Genbank gene 1101936 1102817 . - . ID=gene-PUW38_05175;Name=PUW38_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05175 CP118116.1 Protein Homology CDS 1101936 1102817 . - 0 ID=cds-WJG82122.1;Parent=gene-PUW38_05175;Dbxref=NCBI_GP:WJG82122.1;Name=WJG82122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=PUW38_05175;product=MurR/RpiR family transcriptional regulator;protein_id=WJG82122.1;transl_table=11 CP118116.1 Genbank gene 1103103 1104599 . - . ID=gene-PUW38_05180;Name=PUW38_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05180 CP118116.1 Protein Homology CDS 1103103 1104599 . - 0 ID=cds-WJG82123.1;Parent=gene-PUW38_05180;Dbxref=NCBI_GP:WJG82123.1;Name=WJG82123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=PUW38_05180;product=sodium:solute symporter;protein_id=WJG82123.1;transl_table=11 CP118116.1 Genbank gene 1104936 1105616 . - . ID=gene-PUW38_05185;Name=PUW38_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05185 CP118116.1 Protein Homology CDS 1104936 1105616 . - 0 ID=cds-WJG82124.1;Parent=gene-PUW38_05185;Dbxref=NCBI_GP:WJG82124.1;Name=WJG82124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=PUW38_05185;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WJG82124.1;transl_table=11 CP118116.1 Genbank pseudogene 1106122 1107275 . + . ID=gene-PUW38_05190;Name=PUW38_05190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05190;pseudo=true CP118116.1 Protein Homology CDS 1106122 1107275 . + 0 ID=cds-PUW38_05190;Parent=gene-PUW38_05190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=PUW38_05190;product=N-acetylneuraminate epimerase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1107321 1108013 . + . ID=gene-PUW38_05195;Name=PUW38_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05195 CP118116.1 Protein Homology CDS 1107321 1108013 . + 0 ID=cds-WJG82125.1;Parent=gene-PUW38_05195;Dbxref=NCBI_GP:WJG82125.1;Name=WJG82125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=PUW38_05195;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WJG82125.1;transl_table=11 CP118116.1 Genbank gene 1108296 1109576 . + . ID=gene-PUW38_05200;Name=PUW38_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05200 CP118116.1 Protein Homology CDS 1108296 1109576 . + 0 ID=cds-WJG82126.1;Parent=gene-PUW38_05200;Dbxref=NCBI_GP:WJG82126.1;Name=WJG82126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=PUW38_05200;product=MFS transporter;protein_id=WJG82126.1;transl_table=11 CP118116.1 Genbank pseudogene 1109587 1110693 . + . ID=gene-PUW38_05205;Name=PUW38_05205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05205;pseudo=true CP118116.1 Protein Homology CDS 1109587 1110693 . + 0 ID=cds-PUW38_05205;Parent=gene-PUW38_05205;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=PUW38_05205;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1110860 1111153 . - . ID=gene-PUW38_05210;Name=PUW38_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05210 CP118116.1 Protein Homology CDS 1110860 1111153 . - 0 ID=cds-WJG82127.1;Parent=gene-PUW38_05210;Dbxref=NCBI_GP:WJG82127.1;Name=WJG82127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=PUW38_05210;product=YciI family protein;protein_id=WJG82127.1;transl_table=11 CP118116.1 Genbank gene 1111184 1111402 . + . ID=gene-PUW38_05215;Name=PUW38_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05215 CP118116.1 Protein Homology CDS 1111184 1111402 . + 0 ID=cds-WJG82128.1;Parent=gene-PUW38_05215;Dbxref=NCBI_GP:WJG82128.1;Name=WJG82128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880618.1;locus_tag=PUW38_05215;product=hypothetical protein;protein_id=WJG82128.1;transl_table=11 CP118116.1 Genbank gene 1112003 1112461 . - . ID=gene-PUW38_05220;Name=PUW38_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05220 CP118116.1 Protein Homology CDS 1112003 1112461 . - 0 ID=cds-WJG82129.1;Parent=gene-PUW38_05220;Dbxref=NCBI_GP:WJG82129.1;Name=WJG82129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623372.1;locus_tag=PUW38_05220;product=DUF1311 domain-containing protein;protein_id=WJG82129.1;transl_table=11 CP118116.1 Genbank gene 1112585 1112956 . - . ID=gene-PUW38_05225;Name=PUW38_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05225 CP118116.1 Protein Homology CDS 1112585 1112956 . - 0 ID=cds-WJG82130.1;Parent=gene-PUW38_05225;Dbxref=NCBI_GP:WJG82130.1;Name=WJG82130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747240.1;locus_tag=PUW38_05225;product=hypothetical protein;protein_id=WJG82130.1;transl_table=11 CP118116.1 Genbank gene 1112965 1113288 . - . ID=gene-PUW38_05230;Name=PUW38_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05230 CP118116.1 GeneMarkS-2+ CDS 1112965 1113288 . - 0 ID=cds-WJG82131.1;Parent=gene-PUW38_05230;Dbxref=NCBI_GP:WJG82131.1;Name=WJG82131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_05230;product=DUF1311 domain-containing protein;protein_id=WJG82131.1;transl_table=11 CP118116.1 Genbank gene 1113424 1114296 . - . ID=gene-PUW38_05235;Name=PUW38_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05235 CP118116.1 Protein Homology CDS 1113424 1114296 . - 0 ID=cds-WJG82132.1;Parent=gene-PUW38_05235;Dbxref=NCBI_GP:WJG82132.1;Name=WJG82132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712141.1;locus_tag=PUW38_05235;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WJG82132.1;transl_table=11 CP118116.1 Genbank gene 1114329 1114808 . - . ID=gene-PUW38_05240;Name=PUW38_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05240 CP118116.1 Protein Homology CDS 1114329 1114808 . - 0 ID=cds-WJG82133.1;Parent=gene-PUW38_05240;Dbxref=NCBI_GP:WJG82133.1;Name=WJG82133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284963.1;locus_tag=PUW38_05240;product=Hcp family type VI secretion system effector;protein_id=WJG82133.1;transl_table=11 CP118116.1 Genbank gene 1114796 1116190 . - . ID=gene-PUW38_05245;Name=PUW38_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05245 CP118116.1 Protein Homology CDS 1114796 1116190 . - 0 ID=cds-WJG82134.1;Parent=gene-PUW38_05245;Dbxref=NCBI_GP:WJG82134.1;Name=WJG82134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076067.1;locus_tag=PUW38_05245;product=VasL domain-containing protein;protein_id=WJG82134.1;transl_table=11 CP118116.1 Genbank gene 1116201 1119662 . - . ID=gene-PUW38_05250;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=PUW38_05250 CP118116.1 Protein Homology CDS 1116201 1119662 . - 0 ID=cds-WJG82135.1;Parent=gene-PUW38_05250;Dbxref=NCBI_GP:WJG82135.1;Name=WJG82135.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914744.1;locus_tag=PUW38_05250;product=type VI secretion system membrane subunit TssM;protein_id=WJG82135.1;transl_table=11 CP118116.1 Genbank gene 1119741 1121126 . - . ID=gene-PUW38_05255;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=PUW38_05255 CP118116.1 Protein Homology CDS 1119741 1121126 . - 0 ID=cds-WJG83174.1;Parent=gene-PUW38_05255;Dbxref=NCBI_GP:WJG83174.1;Name=WJG83174.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752219.1;locus_tag=PUW38_05255;product=type VI secretion system protein TssA;protein_id=WJG83174.1;transl_table=11 CP118116.1 Genbank gene 1121155 1121892 . - . ID=gene-PUW38_05260;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=PUW38_05260 CP118116.1 Protein Homology CDS 1121155 1121892 . - 0 ID=cds-WJG82136.1;Parent=gene-PUW38_05260;Dbxref=NCBI_GP:WJG82136.1;Name=WJG82136.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089149.1;locus_tag=PUW38_05260;product=type VI secretion system-associated protein VasI;protein_id=WJG82136.1;transl_table=11 CP118116.1 Genbank gene 1121889 1124552 . - . ID=gene-PUW38_05265;Name=PUW38_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05265 CP118116.1 Protein Homology CDS 1121889 1124552 . - 0 ID=cds-WJG82137.1;Parent=gene-PUW38_05265;Dbxref=NCBI_GP:WJG82137.1;Name=WJG82137.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614299.1;locus_tag=PUW38_05265;product=AAA family ATPase;protein_id=WJG82137.1;transl_table=11 CP118116.1 Genbank gene 1124565 1125323 . - . ID=gene-PUW38_05270;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=PUW38_05270 CP118116.1 Protein Homology CDS 1124565 1125323 . - 0 ID=cds-WJG82138.1;Parent=gene-PUW38_05270;Dbxref=NCBI_GP:WJG82138.1;Name=WJG82138.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343977.1;locus_tag=PUW38_05270;product=type IVB secretion system protein IcmH/DotU;protein_id=WJG82138.1;transl_table=11 CP118116.1 Genbank gene 1125328 1126659 . - . ID=gene-PUW38_05275;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=PUW38_05275 CP118116.1 Protein Homology CDS 1125328 1126659 . - 0 ID=cds-WJG82139.1;Parent=gene-PUW38_05275;Dbxref=NCBI_GP:WJG82139.1;Name=WJG82139.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308252.1;locus_tag=PUW38_05275;product=type VI secretion system baseplate subunit TssK;protein_id=WJG82139.1;transl_table=11 CP118116.1 Genbank gene 1126662 1127195 . - . ID=gene-PUW38_05280;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=PUW38_05280 CP118116.1 Protein Homology CDS 1126662 1127195 . - 0 ID=cds-WJG82140.1;Parent=gene-PUW38_05280;Dbxref=NCBI_GP:WJG82140.1;Name=WJG82140.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001013424.1;locus_tag=PUW38_05280;product=type VI secretion system lipoprotein TssJ;protein_id=WJG82140.1;transl_table=11 CP118116.1 Genbank gene 1127192 1128478 . - . ID=gene-PUW38_05285;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=PUW38_05285 CP118116.1 Protein Homology CDS 1127192 1128478 . - 0 ID=cds-WJG82141.1;Parent=gene-PUW38_05285;Dbxref=NCBI_GP:WJG82141.1;Name=WJG82141.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=PUW38_05285;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WJG82141.1;transl_table=11 CP118116.1 Genbank gene 1128503 1129591 . - . ID=gene-PUW38_05290;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=PUW38_05290 CP118116.1 Protein Homology CDS 1128503 1129591 . - 0 ID=cds-WJG82142.1;Parent=gene-PUW38_05290;Dbxref=NCBI_GP:WJG82142.1;Name=WJG82142.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509052.1;locus_tag=PUW38_05290;product=type VI secretion system baseplate subunit TssG;protein_id=WJG82142.1;transl_table=11 CP118116.1 Genbank gene 1129555 1131408 . - . ID=gene-PUW38_05295;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=PUW38_05295 CP118116.1 Protein Homology CDS 1129555 1131408 . - 0 ID=cds-WJG82143.1;Parent=gene-PUW38_05295;Dbxref=NCBI_GP:WJG82143.1;Name=WJG82143.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=PUW38_05295;product=type VI secretion system baseplate subunit TssF;protein_id=WJG82143.1;transl_table=11 CP118116.1 Genbank gene 1131413 1131829 . - . ID=gene-PUW38_05300;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=PUW38_05300 CP118116.1 Protein Homology CDS 1131413 1131829 . - 0 ID=cds-WJG82144.1;Parent=gene-PUW38_05300;Dbxref=NCBI_GP:WJG82144.1;Name=WJG82144.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686004.1;locus_tag=PUW38_05300;product=type VI secretion system baseplate subunit TssE;protein_id=WJG82144.1;transl_table=11 CP118116.1 Genbank gene 1131826 1133298 . - . ID=gene-PUW38_05305;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=PUW38_05305 CP118116.1 Protein Homology CDS 1131826 1133298 . - 0 ID=cds-WJG82145.1;Parent=gene-PUW38_05305;Dbxref=NCBI_GP:WJG82145.1;Name=WJG82145.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056998.1;locus_tag=PUW38_05305;product=type VI secretion system contractile sheath large subunit;protein_id=WJG82145.1;transl_table=11 CP118116.1 Genbank gene 1133589 1134092 . - . ID=gene-PUW38_05310;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=PUW38_05310 CP118116.1 Protein Homology CDS 1133589 1134092 . - 0 ID=cds-WJG82146.1;Parent=gene-PUW38_05310;Dbxref=NCBI_GP:WJG82146.1;Name=WJG82146.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=PUW38_05310;product=type VI secretion system contractile sheath small subunit;protein_id=WJG82146.1;transl_table=11 CP118116.1 Genbank gene 1134722 1135240 . + . ID=gene-PUW38_05315;Name=PUW38_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05315 CP118116.1 Protein Homology CDS 1134722 1135240 . + 0 ID=cds-WJG82147.1;Parent=gene-PUW38_05315;Dbxref=NCBI_GP:WJG82147.1;Name=WJG82147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=PUW38_05315;product=Hcp family type VI secretion system effector;protein_id=WJG82147.1;transl_table=11 CP118116.1 Genbank gene 1135462 1137573 . + . ID=gene-PUW38_05320;Name=PUW38_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05320 CP118116.1 Protein Homology CDS 1135462 1137573 . + 0 ID=cds-WJG82148.1;Parent=gene-PUW38_05320;Dbxref=NCBI_GP:WJG82148.1;Name=WJG82148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103445.1;locus_tag=PUW38_05320;product=type VI secretion system tip protein VgrG;protein_id=WJG82148.1;transl_table=11 CP118116.1 Genbank pseudogene 1137675 1142072 . + . ID=gene-PUW38_05325;Name=PUW38_05325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05325;pseudo=true CP118116.1 Protein Homology CDS 1137675 1142072 . + 0 ID=cds-PUW38_05325;Parent=gene-PUW38_05325;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514984.1;locus_tag=PUW38_05325;product=DUF6531 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1142265 1142468 . + . ID=gene-PUW38_05330;Name=PUW38_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05330 CP118116.1 GeneMarkS-2+ CDS 1142265 1142468 . + 0 ID=cds-WJG82149.1;Parent=gene-PUW38_05330;Dbxref=NCBI_GP:WJG82149.1;Name=WJG82149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_05330;product=hypothetical protein;protein_id=WJG82149.1;transl_table=11 CP118116.1 Genbank gene 1142887 1147044 . + . ID=gene-PUW38_05335;Name=PUW38_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05335 CP118116.1 Protein Homology CDS 1142887 1147044 . + 0 ID=cds-WJG82150.1;Parent=gene-PUW38_05335;Dbxref=NCBI_GP:WJG82150.1;Name=WJG82150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509054.1;locus_tag=PUW38_05335;product=RHS element core protein;protein_id=WJG82150.1;transl_table=11 CP118116.1 Genbank gene 1147572 1148132 . + . ID=gene-PUW38_05340;Name=PUW38_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05340 CP118116.1 Protein Homology CDS 1147572 1148132 . + 0 ID=cds-WJG83175.1;Parent=gene-PUW38_05340;Dbxref=NCBI_GP:WJG83175.1;Name=WJG83175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=PUW38_05340;product=hypothetical protein;protein_id=WJG83175.1;transl_table=11 CP118116.1 Genbank gene 1148200 1148652 . + . ID=gene-PUW38_05345;Name=PUW38_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05345 CP118116.1 Protein Homology CDS 1148200 1148652 . + 0 ID=cds-WJG82151.1;Parent=gene-PUW38_05345;Dbxref=NCBI_GP:WJG82151.1;Name=WJG82151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675351.1;locus_tag=PUW38_05345;product=tetratricopeptide repeat protein;protein_id=WJG82151.1;transl_table=11 CP118116.1 Genbank gene 1148715 1148975 . + . ID=gene-PUW38_05350;Name=PUW38_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05350 CP118116.1 Protein Homology CDS 1148715 1148975 . + 0 ID=cds-WJG82152.1;Parent=gene-PUW38_05350;Dbxref=NCBI_GP:WJG82152.1;Name=WJG82152.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=PUW38_05350;product=hypothetical protein;protein_id=WJG82152.1;transl_table=11 CP118116.1 Genbank gene 1149033 1149164 . + . ID=gene-PUW38_05355;Name=PUW38_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05355 CP118116.1 GeneMarkS-2+ CDS 1149033 1149164 . + 0 ID=cds-WJG82153.1;Parent=gene-PUW38_05355;Dbxref=NCBI_GP:WJG82153.1;Name=WJG82153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_05355;product=hypothetical protein;protein_id=WJG82153.1;transl_table=11 CP118116.1 Genbank pseudogene 1149358 1150507 . + . ID=gene-PUW38_05360;Name=PUW38_05360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05360;pseudo=true CP118116.1 Protein Homology CDS 1149358 1150507 . + 0 ID=cds-PUW38_05360;Parent=gene-PUW38_05360;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW38_05360;product=IS3-like element IS1230B family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1150646 1151425 . - . ID=gene-PUW38_05365;Name=PUW38_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05365 CP118116.1 Protein Homology CDS 1150646 1151425 . - 0 ID=cds-WJG82154.1;Parent=gene-PUW38_05365;Dbxref=NCBI_GP:WJG82154.1;Name=WJG82154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686692.1;locus_tag=PUW38_05365;product=hypothetical protein;protein_id=WJG82154.1;transl_table=11 CP118116.1 Genbank gene 1151693 1151971 . + . ID=gene-PUW38_05370;Name=PUW38_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05370 CP118116.1 Protein Homology CDS 1151693 1151971 . + 0 ID=cds-WJG82155.1;Parent=gene-PUW38_05370;Dbxref=NCBI_GP:WJG82155.1;Name=WJG82155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675348.1;locus_tag=PUW38_05370;product=hypothetical protein;protein_id=WJG82155.1;transl_table=11 CP118116.1 Genbank gene 1151968 1152345 . + . ID=gene-PUW38_05375;Name=PUW38_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05375 CP118116.1 Protein Homology CDS 1151968 1152345 . + 0 ID=cds-WJG82156.1;Parent=gene-PUW38_05375;Dbxref=NCBI_GP:WJG82156.1;Name=WJG82156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574179.1;locus_tag=PUW38_05375;product=hypothetical protein;protein_id=WJG82156.1;transl_table=11 CP118116.1 Genbank gene 1152885 1153097 . + . ID=gene-PUW38_05380;Name=PUW38_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05380 CP118116.1 Protein Homology CDS 1152885 1153097 . + 0 ID=cds-WJG82157.1;Parent=gene-PUW38_05380;Dbxref=NCBI_GP:WJG82157.1;Name=WJG82157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=PUW38_05380;product=cold-shock protein;protein_id=WJG82157.1;transl_table=11 CP118116.1 Genbank gene 1153108 1153296 . + . ID=gene-PUW38_05385;Name=PUW38_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05385 CP118116.1 Protein Homology CDS 1153108 1153296 . + 0 ID=cds-WJG83176.1;Parent=gene-PUW38_05385;Dbxref=NCBI_GP:WJG83176.1;Name=WJG83176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=PUW38_05385;product=cold-shock protein;protein_id=WJG83176.1;transl_table=11 CP118116.1 Genbank gene 1153555 1154751 . - . ID=gene-PUW38_05390;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=PUW38_05390 CP118116.1 Protein Homology CDS 1153555 1154751 . - 0 ID=cds-WJG82158.1;Parent=gene-PUW38_05390;Dbxref=NCBI_GP:WJG82158.1;Name=WJG82158.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=PUW38_05390;product=porin OmpS1;protein_id=WJG82158.1;transl_table=11 CP118116.1 Genbank gene 1155400 1155711 . + . ID=gene-PUW38_05395;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=PUW38_05395 CP118116.1 Protein Homology CDS 1155400 1155711 . + 0 ID=cds-WJG82159.1;Parent=gene-PUW38_05395;Dbxref=NCBI_GP:WJG82159.1;Name=WJG82159.1;gbkey=CDS;gene=drpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107428.1;locus_tag=PUW38_05395;product=cell division protein DrpB;protein_id=WJG82159.1;transl_table=11 CP118116.1 Genbank gene 1155791 1156486 . + . ID=gene-PUW38_05400;Name=PUW38_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05400 CP118116.1 Protein Homology CDS 1155791 1156486 . + 0 ID=cds-WJG82160.1;Parent=gene-PUW38_05400;Dbxref=NCBI_GP:WJG82160.1;Name=WJG82160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=PUW38_05400;product=phosphohydrolase;protein_id=WJG82160.1;transl_table=11 CP118116.1 Genbank gene 1156560 1157990 . + . ID=gene-PUW38_05405;Name=PUW38_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05405 CP118116.1 Protein Homology CDS 1156560 1157990 . + 0 ID=cds-WJG82161.1;Parent=gene-PUW38_05405;Dbxref=NCBI_GP:WJG82161.1;Name=WJG82161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=PUW38_05405;product=DNA cytosine methyltransferase;protein_id=WJG82161.1;transl_table=11 CP118116.1 Genbank gene 1157971 1158441 . + . ID=gene-PUW38_05410;Name=PUW38_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05410 CP118116.1 Protein Homology CDS 1157971 1158441 . + 0 ID=cds-WJG82162.1;Parent=gene-PUW38_05410;Dbxref=NCBI_GP:WJG82162.1;Name=WJG82162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=PUW38_05410;product=very short patch repair endonuclease;protein_id=WJG82162.1;transl_table=11 CP118116.1 Genbank pseudogene 1158430 1159345 . - . ID=gene-PUW38_05415;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=pseudogene;locus_tag=PUW38_05415;pseudo=true CP118116.1 Protein Homology CDS 1158430 1159345 . - 0 ID=cds-PUW38_05415;Parent=gene-PUW38_05415;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=PUW38_05415;product=drug/metabolite exporter YedA;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1159515 1160431 . + . ID=gene-PUW38_05420;Name=PUW38_05420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05420;pseudo=true CP118116.1 Protein Homology CDS 1159515 1160431 . + 0 ID=cds-PUW38_05420;Parent=gene-PUW38_05420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=PUW38_05420;product=DUF808 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1160508 1160693 . + . ID=gene-PUW38_05425;Name=PUW38_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05425 CP118116.1 Protein Homology CDS 1160508 1160693 . + 0 ID=cds-WJG82163.1;Parent=gene-PUW38_05425;Dbxref=NCBI_GP:WJG82163.1;Name=WJG82163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=PUW38_05425;product=YodC family protein;protein_id=WJG82163.1;transl_table=11 CP118116.1 Genbank gene 1160858 1162570 . + . ID=gene-PUW38_05430;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=PUW38_05430 CP118116.1 Protein Homology CDS 1160858 1162570 . + 0 ID=cds-WJG82164.1;Parent=gene-PUW38_05430;Dbxref=NCBI_GP:WJG82164.1;Name=WJG82164.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=PUW38_05430;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WJG82164.1;transl_table=11 CP118116.1 Genbank gene 1162549 1163364 . - . ID=gene-PUW38_05435;Name=PUW38_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05435 CP118116.1 Protein Homology CDS 1162549 1163364 . - 0 ID=cds-WJG82165.1;Parent=gene-PUW38_05435;Dbxref=NCBI_GP:WJG82165.1;Name=WJG82165.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=PUW38_05435;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WJG82165.1;transl_table=11 CP118116.1 Genbank gene 1163674 1163901 . - . ID=gene-PUW38_05440;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=PUW38_05440 CP118116.1 Protein Homology CDS 1163674 1163901 . - 0 ID=cds-WJG82166.1;Parent=gene-PUW38_05440;Dbxref=NCBI_GP:WJG82166.1;Name=WJG82166.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=PUW38_05440;product=YodD family peroxide/acid resistance protein;protein_id=WJG82166.1;transl_table=11 CP118116.1 Genbank gene 1164029 1164223 . + . ID=gene-PUW38_05445;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=PUW38_05445 CP118116.1 Protein Homology CDS 1164029 1164223 . + 0 ID=cds-WJG82167.1;Parent=gene-PUW38_05445;Dbxref=NCBI_GP:WJG82167.1;Name=WJG82167.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=PUW38_05445;product=protein DsrB;protein_id=WJG82167.1;transl_table=11 CP118116.1 Genbank gene 1164262 1164885 . - . ID=gene-PUW38_05450;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=PUW38_05450 CP118116.1 Protein Homology CDS 1164262 1164885 . - 0 ID=cds-WJG82168.1;Parent=gene-PUW38_05450;Dbxref=NCBI_GP:WJG82168.1;Name=WJG82168.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=PUW38_05450;product=transcriptional regulator RcsA;protein_id=WJG82168.1;transl_table=11 CP118116.1 Genbank gene 1165167 1165961 . - . ID=gene-PUW38_05455;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=PUW38_05455 CP118116.1 Protein Homology CDS 1165167 1165961 . - 0 ID=cds-WJG82169.1;Parent=gene-PUW38_05455;Dbxref=NCBI_GP:WJG82169.1;Name=WJG82169.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=PUW38_05455;product=flagellar biosynthetic protein FliR;protein_id=WJG82169.1;transl_table=11 CP118116.1 Genbank gene 1165970 1166239 . - . ID=gene-PUW38_05460;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=PUW38_05460 CP118116.1 Protein Homology CDS 1165970 1166239 . - 0 ID=cds-WJG82170.1;Parent=gene-PUW38_05460;Dbxref=NCBI_GP:WJG82170.1;Name=WJG82170.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=PUW38_05460;product=flagellar biosynthesis protein FliQ;protein_id=WJG82170.1;transl_table=11 CP118116.1 Genbank gene 1166249 1166986 . - . ID=gene-PUW38_05465;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=PUW38_05465 CP118116.1 Protein Homology CDS 1166249 1166986 . - 0 ID=cds-WJG82171.1;Parent=gene-PUW38_05465;Dbxref=NCBI_GP:WJG82171.1;Name=WJG82171.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=PUW38_05465;product=flagellar type III secretion system pore protein FliP;protein_id=WJG82171.1;transl_table=11 CP118116.1 Genbank gene 1166986 1167363 . - . ID=gene-PUW38_05470;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=PUW38_05470 CP118116.1 Protein Homology CDS 1166986 1167363 . - 0 ID=cds-WJG82172.1;Parent=gene-PUW38_05470;Dbxref=NCBI_GP:WJG82172.1;Name=WJG82172.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=PUW38_05470;product=flagellar biosynthetic protein FliO;protein_id=WJG82172.1;transl_table=11 CP118116.1 Genbank gene 1167363 1167776 . - . ID=gene-PUW38_05475;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=PUW38_05475 CP118116.1 Protein Homology CDS 1167363 1167776 . - 0 ID=cds-WJG82173.1;Parent=gene-PUW38_05475;Dbxref=NCBI_GP:WJG82173.1;Name=WJG82173.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=PUW38_05475;product=flagellar motor switch protein FliN;protein_id=WJG82173.1;transl_table=11 CP118116.1 Genbank gene 1167773 1168777 . - . ID=gene-PUW38_05480;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=PUW38_05480 CP118116.1 Protein Homology CDS 1167773 1168777 . - 0 ID=cds-WJG82174.1;Parent=gene-PUW38_05480;Dbxref=NCBI_GP:WJG82174.1;Name=WJG82174.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=PUW38_05480;product=flagellar motor switch protein FliM;protein_id=WJG82174.1;transl_table=11 CP118116.1 Genbank gene 1168782 1169249 . - . ID=gene-PUW38_05485;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=PUW38_05485 CP118116.1 Protein Homology CDS 1168782 1169249 . - 0 ID=cds-WJG82175.1;Parent=gene-PUW38_05485;Dbxref=NCBI_GP:WJG82175.1;Name=WJG82175.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=PUW38_05485;product=flagellar basal body-associated protein FliL;protein_id=WJG82175.1;transl_table=11 CP118116.1 Genbank gene 1169354 1170571 . - . ID=gene-PUW38_05490;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=PUW38_05490 CP118116.1 Protein Homology CDS 1169354 1170571 . - 0 ID=cds-WJG82176.1;Parent=gene-PUW38_05490;Dbxref=NCBI_GP:WJG82176.1;Name=WJG82176.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=PUW38_05490;product=flagellar hook length control protein FliK;protein_id=WJG82176.1;transl_table=11 CP118116.1 Genbank gene 1170568 1171011 . - . ID=gene-PUW38_05495;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=PUW38_05495 CP118116.1 Protein Homology CDS 1170568 1171011 . - 0 ID=cds-WJG82177.1;Parent=gene-PUW38_05495;Dbxref=NCBI_GP:WJG82177.1;Name=WJG82177.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=PUW38_05495;product=flagellar export protein FliJ;protein_id=WJG82177.1;transl_table=11 CP118116.1 Genbank gene 1171033 1172403 . - . ID=gene-PUW38_05500;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=PUW38_05500 CP118116.1 Protein Homology CDS 1171033 1172403 . - 0 ID=cds-WJG82178.1;Parent=gene-PUW38_05500;Dbxref=NCBI_GP:WJG82178.1;Name=WJG82178.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=PUW38_05500;product=flagellar protein export ATPase FliI;protein_id=WJG82178.1;transl_table=11 CP118116.1 Genbank gene 1172403 1173110 . - . ID=gene-PUW38_05505;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=PUW38_05505 CP118116.1 Protein Homology CDS 1172403 1173110 . - 0 ID=cds-WJG82179.1;Parent=gene-PUW38_05505;Dbxref=NCBI_GP:WJG82179.1;Name=WJG82179.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=PUW38_05505;product=flagellar assembly protein FliH;protein_id=WJG82179.1;transl_table=11 CP118116.1 Genbank gene 1173103 1174098 . - . ID=gene-PUW38_05510;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=PUW38_05510 CP118116.1 Protein Homology CDS 1173103 1174098 . - 0 ID=cds-WJG82180.1;Parent=gene-PUW38_05510;Dbxref=NCBI_GP:WJG82180.1;Name=WJG82180.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=PUW38_05510;product=flagellar motor switch protein FliG;protein_id=WJG82180.1;transl_table=11 CP118116.1 Genbank gene 1174091 1175767 . - . ID=gene-PUW38_05515;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=PUW38_05515 CP118116.1 Protein Homology CDS 1174091 1175767 . - 0 ID=cds-WJG82181.1;Parent=gene-PUW38_05515;Dbxref=NCBI_GP:WJG82181.1;Name=WJG82181.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=PUW38_05515;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WJG82181.1;transl_table=11 CP118116.1 Genbank gene 1175984 1176298 . + . ID=gene-PUW38_05520;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=PUW38_05520 CP118116.1 Protein Homology CDS 1175984 1176298 . + 0 ID=cds-WJG82182.1;Parent=gene-PUW38_05520;Dbxref=NCBI_GP:WJG82182.1;Name=WJG82182.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=PUW38_05520;product=flagellar hook-basal body complex protein FliE;protein_id=WJG82182.1;transl_table=11 CP118116.1 Genbank gene 1176418 1176804 . - . ID=gene-PUW38_05525;Name=PUW38_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05525 CP118116.1 Protein Homology CDS 1176418 1176804 . - 0 ID=cds-WJG83177.1;Parent=gene-PUW38_05525;Dbxref=NCBI_GP:WJG83177.1;Name=WJG83177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=PUW38_05525;product=hypothetical protein;protein_id=WJG83177.1;transl_table=11 CP118116.1 Genbank gene 1177069 1177302 . - . ID=gene-PUW38_05530;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=PUW38_05530 CP118116.1 Protein Homology CDS 1177069 1177302 . - 0 ID=cds-WJG82183.1;Parent=gene-PUW38_05530;Dbxref=NCBI_GP:WJG82183.1;Name=WJG82183.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=PUW38_05530;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WJG82183.1;transl_table=11 CP118116.1 Genbank pseudogene 1177299 1178503 . - . ID=gene-PUW38_05535;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=pseudogene;locus_tag=PUW38_05535;pseudo=true CP118116.1 Protein Homology CDS 1177299 1178503 . - 0 ID=cds-PUW38_05535;Parent=gene-PUW38_05535;Note=frameshifted;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=PUW38_05535;product=selenium metabolism membrane protein YedE/FdhT;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1178689 1179090 . + . ID=gene-PUW38_05540;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=PUW38_05540 CP118116.1 Protein Homology CDS 1178689 1179090 . + 0 ID=cds-WJG83178.1;Parent=gene-PUW38_05540;Dbxref=NCBI_GP:WJG83178.1;Name=WJG83178.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754693.1;locus_tag=PUW38_05540;product=lipoprotein YedD;protein_id=WJG83178.1;transl_table=11 CP118116.1 Genbank gene 1179130 1180614 . - . ID=gene-PUW38_05545;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=PUW38_05545 CP118116.1 Protein Homology CDS 1179130 1180614 . - 0 ID=cds-WJG82184.1;Parent=gene-PUW38_05545;Dbxref=NCBI_GP:WJG82184.1;Name=WJG82184.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=PUW38_05545;product=alpha-amylase;protein_id=WJG82184.1;transl_table=11 CP118116.1 Genbank gene 1180686 1181054 . - . ID=gene-PUW38_05550;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=PUW38_05550 CP118116.1 Protein Homology CDS 1180686 1181054 . - 0 ID=cds-WJG82185.1;Parent=gene-PUW38_05550;Dbxref=NCBI_GP:WJG82185.1;Name=WJG82185.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=PUW38_05550;product=flagella biosynthesis regulatory protein FliT;protein_id=WJG82185.1;transl_table=11 CP118116.1 Genbank gene 1181054 1181461 . - . ID=gene-PUW38_05555;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=PUW38_05555 CP118116.1 Protein Homology CDS 1181054 1181461 . - 0 ID=cds-WJG82186.1;Parent=gene-PUW38_05555;Dbxref=NCBI_GP:WJG82186.1;Name=WJG82186.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=PUW38_05555;product=flagellar export chaperone FliS;protein_id=WJG82186.1;transl_table=11 CP118116.1 Genbank gene 1181476 1182882 . - . ID=gene-PUW38_05560;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=PUW38_05560 CP118116.1 Protein Homology CDS 1181476 1182882 . - 0 ID=cds-WJG82187.1;Parent=gene-PUW38_05560;Dbxref=NCBI_GP:WJG82187.1;Name=WJG82187.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=PUW38_05560;product=flagellar filament capping protein FliD;protein_id=WJG82187.1;transl_table=11 CP118116.1 Genbank gene 1182881 1183120 . + . ID=gene-PUW38_05565;Name=PUW38_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05565 CP118116.1 GeneMarkS-2+ CDS 1182881 1183120 . + 0 ID=cds-WJG82188.1;Parent=gene-PUW38_05565;Dbxref=NCBI_GP:WJG82188.1;Name=WJG82188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_05565;product=hypothetical protein;protein_id=WJG82188.1;transl_table=11 CP118116.1 Genbank gene 1183138 1184655 . + . ID=gene-PUW38_05570;Name=PUW38_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05570 CP118116.1 Protein Homology CDS 1183138 1184655 . + 0 ID=cds-WJG82189.1;Parent=gene-PUW38_05570;Dbxref=NCBI_GP:WJG82189.1;Name=WJG82189.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=PUW38_05570;product=flagellin;protein_id=WJG82189.1;transl_table=11 CP118116.1 Genbank gene 1184734 1185939 . + . ID=gene-PUW38_05575;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=PUW38_05575 CP118116.1 Protein Homology CDS 1184734 1185939 . + 0 ID=cds-WJG82190.1;Parent=gene-PUW38_05575;Dbxref=NCBI_GP:WJG82190.1;Name=WJG82190.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=PUW38_05575;product=flagellin lysine-N-methylase;protein_id=WJG82190.1;transl_table=11 CP118116.1 Genbank gene 1186136 1186855 . + . ID=gene-PUW38_05580;Name=PUW38_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05580 CP118116.1 Protein Homology CDS 1186136 1186855 . + 0 ID=cds-WJG82191.1;Parent=gene-PUW38_05580;Dbxref=NCBI_GP:WJG82191.1;Name=WJG82191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=PUW38_05580;product=RNA polymerase sigma factor FliA;protein_id=WJG82191.1;transl_table=11 CP118116.1 Genbank pseudogene 1186914 1187466 . + . ID=gene-PUW38_05585;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=pseudogene;locus_tag=PUW38_05585;pseudo=true CP118116.1 Protein Homology CDS 1186914 1187466 . + 0 ID=cds-PUW38_05585;Parent=gene-PUW38_05585;Note=frameshifted;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=PUW38_05585;product=flagella biosynthesis regulatory protein FliZ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1187613 1188413 . + . ID=gene-PUW38_05590;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=PUW38_05590 CP118116.1 Protein Homology CDS 1187613 1188413 . + 0 ID=cds-WJG82192.1;Parent=gene-PUW38_05590;Dbxref=NCBI_GP:WJG82192.1;Name=WJG82192.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=PUW38_05590;product=cystine ABC transporter substrate-binding protein;protein_id=WJG82192.1;transl_table=11 CP118116.1 Genbank gene 1188567 1189553 . + . ID=gene-PUW38_05595;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=PUW38_05595 CP118116.1 Protein Homology CDS 1188567 1189553 . + 0 ID=cds-WJG82193.1;Parent=gene-PUW38_05595;Dbxref=NCBI_GP:WJG82193.1;Name=WJG82193.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=PUW38_05595;product=D-cysteine desulfhydrase;protein_id=WJG82193.1;transl_table=11 CP118116.1 Genbank gene 1189574 1190242 . + . ID=gene-PUW38_05600;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=PUW38_05600 CP118116.1 Protein Homology CDS 1189574 1190242 . + 0 ID=cds-WJG82194.1;Parent=gene-PUW38_05600;Dbxref=NCBI_GP:WJG82194.1;Name=WJG82194.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=PUW38_05600;product=cystine ABC transporter permease;protein_id=WJG82194.1;transl_table=11 CP118116.1 Genbank gene 1190239 1190991 . + . ID=gene-PUW38_05605;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=PUW38_05605 CP118116.1 Protein Homology CDS 1190239 1190991 . + 0 ID=cds-WJG82195.1;Parent=gene-PUW38_05605;Dbxref=NCBI_GP:WJG82195.1;Name=WJG82195.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=PUW38_05605;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WJG82195.1;transl_table=11 CP118116.1 Genbank gene 1191224 1191946 . + . ID=gene-PUW38_05610;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=PUW38_05610 CP118116.1 Protein Homology CDS 1191224 1191946 . + 0 ID=cds-WJG82196.1;Parent=gene-PUW38_05610;Dbxref=NCBI_GP:WJG82196.1;Name=WJG82196.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=PUW38_05610;product=transcriptional regulator SdiA;protein_id=WJG82196.1;transl_table=11 CP118116.1 Genbank gene 1192013 1192237 . - . ID=gene-PUW38_05615;Name=PUW38_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05615 CP118116.1 Protein Homology CDS 1192013 1192237 . - 0 ID=cds-WJG82197.1;Parent=gene-PUW38_05615;Dbxref=NCBI_GP:WJG82197.1;Name=WJG82197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=PUW38_05615;product=DUF2594 family protein;protein_id=WJG82197.1;transl_table=11 CP118116.1 Genbank pseudogene 1192234 1192387 . - . ID=gene-PUW38_05620;Name=PUW38_05620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05620;pseudo=true CP118116.1 Protein Homology CDS 1192234 1192387 . - 0 ID=cds-PUW38_05620;Parent=gene-PUW38_05620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=PUW38_05620;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1192699 1193355 . + . ID=gene-PUW38_05625;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=PUW38_05625 CP118116.1 Protein Homology CDS 1192699 1193355 . + 0 ID=cds-WJG82198.1;Parent=gene-PUW38_05625;Dbxref=NCBI_GP:WJG82198.1;Name=WJG82198.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=PUW38_05625;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WJG82198.1;transl_table=11 CP118116.1 Genbank gene 1193352 1195184 . + . ID=gene-PUW38_05630;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=PUW38_05630 CP118116.1 Protein Homology CDS 1193352 1195184 . + 0 ID=cds-WJG82199.1;Parent=gene-PUW38_05630;Dbxref=NCBI_GP:WJG82199.1;Name=WJG82199.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=PUW38_05630;product=excinuclease ABC subunit UvrC;protein_id=WJG82199.1;transl_table=11 CP118116.1 Genbank gene 1195241 1195789 . + . ID=gene-PUW38_05635;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=PUW38_05635 CP118116.1 Protein Homology CDS 1195241 1195789 . + 0 ID=cds-WJG82200.1;Parent=gene-PUW38_05635;Dbxref=NCBI_GP:WJG82200.1;Name=WJG82200.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=PUW38_05635;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WJG82200.1;transl_table=11 CP118116.1 Genbank gene 1195941 1196016 . + . ID=gene-PUW38_05640;Name=PUW38_05640;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_05640 CP118116.1 tRNAscan-SE tRNA 1195941 1196016 . + . ID=rna-PUW38_05640;Parent=gene-PUW38_05640;anticodon=(pos:1195974..1195976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_05640;product=tRNA-Gly CP118116.1 tRNAscan-SE exon 1195941 1196016 . + . ID=exon-PUW38_05640-1;Parent=rna-PUW38_05640;anticodon=(pos:1195974..1195976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_05640;product=tRNA-Gly CP118116.1 Genbank gene 1196068 1196141 . + . ID=gene-PUW38_05645;Name=PUW38_05645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_05645 CP118116.1 tRNAscan-SE tRNA 1196068 1196141 . + . ID=rna-PUW38_05645;Parent=gene-PUW38_05645;anticodon=(pos:1196100..1196102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_05645;product=tRNA-Cys CP118116.1 tRNAscan-SE exon 1196068 1196141 . + . ID=exon-PUW38_05645-1;Parent=rna-PUW38_05645;anticodon=(pos:1196100..1196102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_05645;product=tRNA-Cys CP118116.1 Genbank gene 1196153 1196239 . + . ID=gene-PUW38_05650;Name=PUW38_05650;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_05650 CP118116.1 tRNAscan-SE tRNA 1196153 1196239 . + . ID=rna-PUW38_05650;Parent=gene-PUW38_05650;anticodon=(pos:1196187..1196189);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_05650;product=tRNA-Leu CP118116.1 tRNAscan-SE exon 1196153 1196239 . + . ID=exon-PUW38_05650-1;Parent=rna-PUW38_05650;anticodon=(pos:1196187..1196189);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_05650;product=tRNA-Leu CP118116.1 Genbank pseudogene 1196488 1196819 . + . ID=gene-PUW38_05655;Name=PUW38_05655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05655;pseudo=true CP118116.1 Protein Homology CDS 1196488 1196819 . + 0 ID=cds-PUW38_05655;Parent=gene-PUW38_05655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=PUW38_05655;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1197033 1198472 . + . ID=gene-PUW38_05660;Name=PUW38_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05660 CP118116.1 Protein Homology CDS 1197033 1198472 . + 0 ID=cds-WJG82201.1;Parent=gene-PUW38_05660;Dbxref=NCBI_GP:WJG82201.1;Name=WJG82201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=PUW38_05660;product=SH3 domain-containing protein;protein_id=WJG82201.1;transl_table=11 CP118116.1 Genbank pseudogene 1198685 1199010 . + . ID=gene-PUW38_05665;Name=PUW38_05665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05665;pseudo=true CP118116.1 Protein Homology CDS 1198685 1199010 . + 0 ID=cds-PUW38_05665;Parent=gene-PUW38_05665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=PUW38_05665;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1199249 1199914 . + . ID=gene-PUW38_05670;Name=PUW38_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05670 CP118116.1 Protein Homology CDS 1199249 1199914 . + 0 ID=cds-WJG82202.1;Parent=gene-PUW38_05670;Dbxref=NCBI_GP:WJG82202.1;Name=WJG82202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=PUW38_05670;product=YecA family protein;protein_id=WJG82202.1;transl_table=11 CP118116.1 Genbank gene 1199989 1201209 . - . ID=gene-PUW38_05675;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=PUW38_05675 CP118116.1 Protein Homology CDS 1199989 1201209 . - 0 ID=cds-WJG82203.1;Parent=gene-PUW38_05675;Dbxref=NCBI_GP:WJG82203.1;Name=WJG82203.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=PUW38_05675;product=tyrosine transporter TyrP;protein_id=WJG82203.1;transl_table=11 CP118116.1 Genbank gene 1201436 1201675 . + . ID=gene-PUW38_05680;Name=PUW38_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05680 CP118116.1 Protein Homology CDS 1201436 1201675 . + 0 ID=cds-WJG82204.1;Parent=gene-PUW38_05680;Dbxref=NCBI_GP:WJG82204.1;Name=WJG82204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=PUW38_05680;product=YecH family protein;protein_id=WJG82204.1;transl_table=11 CP118116.1 Genbank gene 1201721 1202218 . - . ID=gene-PUW38_05685;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=PUW38_05685 CP118116.1 Protein Homology CDS 1201721 1202218 . - 0 ID=cds-WJG82205.1;Parent=gene-PUW38_05685;Dbxref=NCBI_GP:WJG82205.1;Name=WJG82205.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=PUW38_05685;product=non-heme ferritin;protein_id=WJG82205.1;transl_table=11 CP118116.1 Genbank gene 1202458 1202793 . - . ID=gene-PUW38_05690;Name=PUW38_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05690 CP118116.1 Protein Homology CDS 1202458 1202793 . - 0 ID=cds-WJG82206.1;Parent=gene-PUW38_05690;Dbxref=NCBI_GP:WJG82206.1;Name=WJG82206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=PUW38_05690;product=YecR-like lipofamily protein;protein_id=WJG82206.1;transl_table=11 CP118116.1 Genbank gene 1203049 1203687 . + . ID=gene-PUW38_05695;Name=PUW38_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05695 CP118116.1 Protein Homology CDS 1203049 1203687 . + 0 ID=cds-WJG82207.1;Parent=gene-PUW38_05695;Dbxref=NCBI_GP:WJG82207.1;Name=WJG82207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=PUW38_05695;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WJG82207.1;transl_table=11 CP118116.1 Genbank gene 1203866 1204369 . - . ID=gene-PUW38_05700;Name=PUW38_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05700 CP118116.1 Protein Homology CDS 1203866 1204369 . - 0 ID=cds-WJG82208.1;Parent=gene-PUW38_05700;Dbxref=NCBI_GP:WJG82208.1;Name=WJG82208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=PUW38_05700;product=non-heme ferritin-like protein;protein_id=WJG82208.1;transl_table=11 CP118116.1 Genbank gene 1204919 1205476 . + . ID=gene-PUW38_05705;Name=PUW38_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05705 CP118116.1 Protein Homology CDS 1204919 1205476 . + 0 ID=cds-WJG82209.1;Parent=gene-PUW38_05705;Dbxref=NCBI_GP:WJG82209.1;Name=WJG82209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=PUW38_05705;product=DJ-1/PfpI family protein;protein_id=WJG82209.1;transl_table=11 CP118116.1 Genbank pseudogene 1205705 1205887 . + . ID=gene-PUW38_05710;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=PUW38_05710;pseudo=true CP118116.1 Protein Homology CDS 1205705 1205887 . + 0 ID=cds-PUW38_05710;Parent=gene-PUW38_05710;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=PUW38_05710;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1206110 1206913 . + . ID=gene-PUW38_05715;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=PUW38_05715 CP118116.1 Protein Homology CDS 1206110 1206913 . + 0 ID=cds-WJG82210.1;Parent=gene-PUW38_05715;Dbxref=NCBI_GP:WJG82210.1;Name=WJG82210.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=PUW38_05715;product=trehalose-phosphatase;protein_id=WJG82210.1;transl_table=11 CP118116.1 Genbank gene 1206888 1208309 . + . ID=gene-PUW38_05720;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=PUW38_05720 CP118116.1 Protein Homology CDS 1206888 1208309 . + 0 ID=cds-WJG82211.1;Parent=gene-PUW38_05720;Dbxref=NCBI_GP:WJG82211.1;Name=WJG82211.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=PUW38_05720;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WJG82211.1;transl_table=11 CP118116.1 Genbank gene 1208327 1208755 . - . ID=gene-PUW38_05725;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=PUW38_05725 CP118116.1 Protein Homology CDS 1208327 1208755 . - 0 ID=cds-WJG82212.1;Parent=gene-PUW38_05725;Dbxref=NCBI_GP:WJG82212.1;Name=WJG82212.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=PUW38_05725;product=universal stress protein UspC;protein_id=WJG82212.1;transl_table=11 CP118116.1 Genbank gene 1208752 1208868 . - . ID=gene-PUW38_05730;Name=PUW38_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05730 CP118116.1 Protein Homology CDS 1208752 1208868 . - 0 ID=cds-WJG82213.1;Parent=gene-PUW38_05730;Dbxref=NCBI_GP:WJG82213.1;Name=WJG82213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=PUW38_05730;product=hypothetical protein;protein_id=WJG82213.1;transl_table=11 CP118116.1 Genbank gene 1209551 1209892 . + . ID=gene-PUW38_05735;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=PUW38_05735 CP118116.1 Protein Homology CDS 1209551 1209892 . + 0 ID=cds-WJG82214.1;Parent=gene-PUW38_05735;Dbxref=NCBI_GP:WJG82214.1;Name=WJG82214.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=PUW38_05735;product=flagellar transcriptional regulator FlhD;protein_id=WJG82214.1;transl_table=11 CP118116.1 Genbank gene 1209889 1210473 . + . ID=gene-PUW38_05740;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=PUW38_05740 CP118116.1 Protein Homology CDS 1209889 1210473 . + 0 ID=cds-WJG82215.1;Parent=gene-PUW38_05740;Dbxref=NCBI_GP:WJG82215.1;Name=WJG82215.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=PUW38_05740;product=flagellar transcriptional regulator FlhC;protein_id=WJG82215.1;transl_table=11 CP118116.1 Genbank gene 1210598 1211485 . + . ID=gene-PUW38_05745;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=PUW38_05745 CP118116.1 Protein Homology CDS 1210598 1211485 . + 0 ID=cds-WJG82216.1;Parent=gene-PUW38_05745;Dbxref=NCBI_GP:WJG82216.1;Name=WJG82216.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=PUW38_05745;product=flagellar motor stator protein MotA;protein_id=WJG82216.1;transl_table=11 CP118116.1 Genbank gene 1211482 1212411 . + . ID=gene-PUW38_05750;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=PUW38_05750 CP118116.1 Protein Homology CDS 1211482 1212411 . + 0 ID=cds-WJG82217.1;Parent=gene-PUW38_05750;Dbxref=NCBI_GP:WJG82217.1;Name=WJG82217.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=PUW38_05750;product=flagellar motor protein MotB;protein_id=WJG82217.1;transl_table=11 CP118116.1 Genbank gene 1212416 1214431 . + . ID=gene-PUW38_05755;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=PUW38_05755 CP118116.1 Protein Homology CDS 1212416 1214431 . + 0 ID=cds-WJG82218.1;Parent=gene-PUW38_05755;Dbxref=NCBI_GP:WJG82218.1;Name=WJG82218.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=PUW38_05755;product=chemotaxis protein CheA;protein_id=WJG82218.1;transl_table=11 CP118116.1 Genbank gene 1214452 1214955 . + . ID=gene-PUW38_05760;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=PUW38_05760 CP118116.1 Protein Homology CDS 1214452 1214955 . + 0 ID=cds-WJG82219.1;Parent=gene-PUW38_05760;Dbxref=NCBI_GP:WJG82219.1;Name=WJG82219.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=PUW38_05760;product=chemotaxis protein CheW;protein_id=WJG82219.1;transl_table=11 CP118116.1 Genbank pseudogene 1215192 1216851 . + . ID=gene-PUW38_05765;Name=tar;gbkey=Gene;gene=tar;gene_biotype=pseudogene;locus_tag=PUW38_05765;pseudo=true CP118116.1 Protein Homology CDS 1215192 1216851 . + 0 ID=cds-PUW38_05765;Parent=gene-PUW38_05765;Note=frameshifted;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=PUW38_05765;product=methyl-accepting chemotaxis protein II;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1217005 1217871 . + . ID=gene-PUW38_05770;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=PUW38_05770 CP118116.1 Protein Homology CDS 1217005 1217871 . + 0 ID=cds-WJG82220.1;Parent=gene-PUW38_05770;Dbxref=NCBI_GP:WJG82220.1;Name=WJG82220.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=PUW38_05770;product=protein-glutamate O-methyltransferase CheR;protein_id=WJG82220.1;transl_table=11 CP118116.1 Genbank gene 1217868 1218917 . + . ID=gene-PUW38_05775;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=PUW38_05775 CP118116.1 Protein Homology CDS 1217868 1218917 . + 0 ID=cds-WJG82221.1;Parent=gene-PUW38_05775;Dbxref=NCBI_GP:WJG82221.1;Name=WJG82221.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=PUW38_05775;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WJG82221.1;transl_table=11 CP118116.1 Genbank gene 1218935 1219324 . + . ID=gene-PUW38_05780;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=PUW38_05780 CP118116.1 Protein Homology CDS 1218935 1219324 . + 0 ID=cds-WJG82222.1;Parent=gene-PUW38_05780;Dbxref=NCBI_GP:WJG82222.1;Name=WJG82222.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=PUW38_05780;product=chemotaxis response regulator CheY;protein_id=WJG82222.1;transl_table=11 CP118116.1 Genbank pseudogene 1219335 1219978 . + . ID=gene-PUW38_05785;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=pseudogene;locus_tag=PUW38_05785;pseudo=true CP118116.1 Protein Homology CDS 1219335 1219978 . + 0 ID=cds-PUW38_05785;Parent=gene-PUW38_05785;Note=frameshifted;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=PUW38_05785;product=protein phosphatase CheZ;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1220172 1221126 . + . ID=gene-PUW38_05790;Name=PUW38_05790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05790;pseudo=true CP118116.1 Protein Homology CDS 1220172 1221126 . + 0 ID=cds-PUW38_05790;Parent=gene-PUW38_05790;Note=frameshifted;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=PUW38_05790;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1221119 1223197 . + . ID=gene-PUW38_05795;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=pseudogene;locus_tag=PUW38_05795;pseudo=true CP118116.1 Protein Homology CDS 1221119 1223197 . + 0 ID=cds-PUW38_05795;Parent=gene-PUW38_05795;Note=internal stop;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=PUW38_05795;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1223197 1223589 . + . ID=gene-PUW38_05800;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=protein_coding;locus_tag=PUW38_05800 CP118116.1 Protein Homology CDS 1223197 1223589 . + 0 ID=cds-WJG82223.1;Parent=gene-PUW38_05800;Dbxref=NCBI_GP:WJG82223.1;Name=WJG82223.1;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=PUW38_05800;product=flagellar protein FlhE;protein_id=WJG82223.1;transl_table=11 CP118116.1 Genbank pseudogene 1223826 1224964 . + . ID=gene-PUW38_05805;Name=PUW38_05805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05805;pseudo=true CP118116.1 Protein Homology CDS 1223826 1224964 . + 0 ID=cds-PUW38_05805;Parent=gene-PUW38_05805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=PUW38_05805;product=glycoside hydrolase family 105 protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1225018 1226888 . - . ID=gene-PUW38_05810;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=PUW38_05810;pseudo=true CP118116.1 Protein Homology CDS 1225018 1226888 . - 0 ID=cds-PUW38_05810;Parent=gene-PUW38_05810;Note=frameshifted;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=PUW38_05810;product=penicillin-binding protein 2;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1227077 1228810 . - . ID=gene-PUW38_05815;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=PUW38_05815 CP118116.1 Protein Homology CDS 1227077 1228810 . - 0 ID=cds-WJG82224.1;Parent=gene-PUW38_05815;Dbxref=NCBI_GP:WJG82224.1;Name=WJG82224.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=PUW38_05815;product=arginine--tRNA ligase;protein_id=WJG82224.1;transl_table=11 CP118116.1 Genbank gene 1229047 1229616 . + . ID=gene-PUW38_05820;Name=PUW38_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05820 CP118116.1 Protein Homology CDS 1229047 1229616 . + 0 ID=cds-WJG82225.1;Parent=gene-PUW38_05820;Dbxref=NCBI_GP:WJG82225.1;Name=WJG82225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=PUW38_05820;product=VOC family protein;protein_id=WJG82225.1;transl_table=11 CP118116.1 Genbank gene 1229636 1230382 . + . ID=gene-PUW38_05825;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=PUW38_05825 CP118116.1 Protein Homology CDS 1229636 1230382 . + 0 ID=cds-WJG82226.1;Parent=gene-PUW38_05825;Dbxref=NCBI_GP:WJG82226.1;Name=WJG82226.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=PUW38_05825;product=copper homeostasis protein CutC;protein_id=WJG82226.1;transl_table=11 CP118116.1 Genbank gene 1230618 1231589 . - . ID=gene-PUW38_05830;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=PUW38_05830 CP118116.1 Protein Homology CDS 1230618 1231589 . - 0 ID=cds-WJG82227.1;Parent=gene-PUW38_05830;Dbxref=NCBI_GP:WJG82227.1;Name=WJG82227.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=PUW38_05830;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WJG82227.1;transl_table=11 CP118116.1 Genbank gene 1231586 1232329 . - . ID=gene-PUW38_05835;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=PUW38_05835 CP118116.1 Protein Homology CDS 1231586 1232329 . - 0 ID=cds-WJG82228.1;Parent=gene-PUW38_05835;Dbxref=NCBI_GP:WJG82228.1;Name=WJG82228.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=PUW38_05835;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WJG82228.1;transl_table=11 CP118116.1 Genbank gene 1232370 1232765 . - . ID=gene-PUW38_05840;Name=PUW38_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05840 CP118116.1 Protein Homology CDS 1232370 1232765 . - 0 ID=cds-WJG82229.1;Parent=gene-PUW38_05840;Dbxref=NCBI_GP:WJG82229.1;Name=WJG82229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=PUW38_05840;product=MAPEG family protein;protein_id=WJG82229.1;transl_table=11 CP118116.1 Genbank gene 1232818 1233636 . - . ID=gene-PUW38_05845;Name=PUW38_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05845 CP118116.1 Protein Homology CDS 1232818 1233636 . - 0 ID=cds-WJG82230.1;Parent=gene-PUW38_05845;Dbxref=NCBI_GP:WJG82230.1;Name=WJG82230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=PUW38_05845;product=DUF72 domain-containing protein;protein_id=WJG82230.1;transl_table=11 CP118116.1 Genbank gene 1233633 1234199 . - . ID=gene-PUW38_05850;Name=PUW38_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05850 CP118116.1 Protein Homology CDS 1233633 1234199 . - 0 ID=cds-WJG82231.1;Parent=gene-PUW38_05850;Dbxref=NCBI_GP:WJG82231.1;Name=WJG82231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=PUW38_05850;product=hydrolase;protein_id=WJG82231.1;transl_table=11 CP118116.1 Genbank gene 1234524 1236296 . + . ID=gene-PUW38_05855;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=PUW38_05855 CP118116.1 Protein Homology CDS 1234524 1236296 . + 0 ID=cds-WJG82232.1;Parent=gene-PUW38_05855;Dbxref=NCBI_GP:WJG82232.1;Name=WJG82232.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=PUW38_05855;product=aspartate--tRNA ligase;protein_id=WJG82232.1;transl_table=11 CP118116.1 Genbank gene 1236399 1236851 . + . ID=gene-PUW38_05860;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=PUW38_05860 CP118116.1 Protein Homology CDS 1236399 1236851 . + 0 ID=cds-WJG82233.1;Parent=gene-PUW38_05860;Dbxref=NCBI_GP:WJG82233.1;Name=WJG82233.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=PUW38_05860;product=dihydroneopterin triphosphate diphosphatase;protein_id=WJG82233.1;transl_table=11 CP118116.1 Genbank gene 1236881 1237621 . + . ID=gene-PUW38_05865;Name=PUW38_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05865 CP118116.1 Protein Homology CDS 1236881 1237621 . + 0 ID=cds-WJG82234.1;Parent=gene-PUW38_05865;Dbxref=NCBI_GP:WJG82234.1;Name=WJG82234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=PUW38_05865;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WJG82234.1;transl_table=11 CP118116.1 Genbank gene 1237658 1238179 . + . ID=gene-PUW38_05870;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=PUW38_05870 CP118116.1 Protein Homology CDS 1237658 1238179 . + 0 ID=cds-WJG82235.1;Parent=gene-PUW38_05870;Dbxref=NCBI_GP:WJG82235.1;Name=WJG82235.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=PUW38_05870;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WJG82235.1;transl_table=11 CP118116.1 Genbank gene 1238181 1238780 . - . ID=gene-PUW38_05875;Name=PUW38_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05875 CP118116.1 Protein Homology CDS 1238181 1238780 . - 0 ID=cds-WJG82236.1;Parent=gene-PUW38_05875;Dbxref=NCBI_GP:WJG82236.1;Name=WJG82236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=PUW38_05875;product=YebB family permuted papain-like enzyme;protein_id=WJG82236.1;transl_table=11 CP118116.1 Genbank gene 1238989 1239681 . + . ID=gene-PUW38_05880;Name=PUW38_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05880 CP118116.1 Protein Homology CDS 1238989 1239681 . + 0 ID=cds-WJG82237.1;Parent=gene-PUW38_05880;Dbxref=NCBI_GP:WJG82237.1;Name=WJG82237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=PUW38_05880;product=hypothetical protein;protein_id=WJG82237.1;transl_table=11 CP118116.1 Genbank gene 1240041 1240652 . + . ID=gene-PUW38_05885;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=PUW38_05885 CP118116.1 Protein Homology CDS 1240041 1240652 . + 0 ID=cds-WJG82238.1;Parent=gene-PUW38_05885;Dbxref=NCBI_GP:WJG82238.1;Name=WJG82238.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=PUW38_05885;product=Holliday junction branch migration protein RuvA;protein_id=WJG82238.1;transl_table=11 CP118116.1 Genbank gene 1240661 1241671 . + . ID=gene-PUW38_05890;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=PUW38_05890 CP118116.1 Protein Homology CDS 1240661 1241671 . + 0 ID=cds-WJG82239.1;Parent=gene-PUW38_05890;Dbxref=NCBI_GP:WJG82239.1;Name=WJG82239.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=PUW38_05890;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WJG82239.1;transl_table=11 CP118116.1 Genbank gene 1241750 1242535 . - . ID=gene-PUW38_05895;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=PUW38_05895 CP118116.1 Protein Homology CDS 1241750 1242535 . - 0 ID=cds-WJG82240.1;Parent=gene-PUW38_05895;Dbxref=NCBI_GP:WJG82240.1;Name=WJG82240.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=PUW38_05895;product=zinc ABC transporter permease subunit ZnuB;protein_id=WJG82240.1;transl_table=11 CP118116.1 Genbank pseudogene 1242532 1243286 . - . ID=gene-PUW38_05900;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=pseudogene;locus_tag=PUW38_05900;pseudo=true CP118116.1 Protein Homology CDS 1242532 1243286 . - 0 ID=cds-PUW38_05900;Parent=gene-PUW38_05900;Note=frameshifted;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=PUW38_05900;product=zinc ABC transporter ATP-binding protein ZnuC;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1243365 1244309 . + . ID=gene-PUW38_05905;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=PUW38_05905 CP118116.1 Protein Homology CDS 1243365 1244309 . + 0 ID=cds-WJG82241.1;Parent=gene-PUW38_05905;Dbxref=NCBI_GP:WJG82241.1;Name=WJG82241.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=PUW38_05905;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WJG82241.1;transl_table=11 CP118116.1 Genbank gene 1244325 1245644 . + . ID=gene-PUW38_05910;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=PUW38_05910 CP118116.1 Protein Homology CDS 1244325 1245644 . + 0 ID=cds-WJG82242.1;Parent=gene-PUW38_05910;Dbxref=NCBI_GP:WJG82242.1;Name=WJG82242.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=PUW38_05910;product=murein DD-endopeptidase MepM;protein_id=WJG82242.1;transl_table=11 CP118116.1 Genbank gene 1245761 1246732 . + . ID=gene-PUW38_05915;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=PUW38_05915 CP118116.1 Protein Homology CDS 1245761 1246732 . + 0 ID=cds-WJG82243.1;Parent=gene-PUW38_05915;Dbxref=NCBI_GP:WJG82243.1;Name=WJG82243.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=PUW38_05915;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WJG82243.1;transl_table=11 CP118116.1 Genbank gene 1246805 1248247 . - . ID=gene-PUW38_05920;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=PUW38_05920 CP118116.1 Protein Homology CDS 1246805 1248247 . - 0 ID=cds-WJG82244.1;Parent=gene-PUW38_05920;Dbxref=NCBI_GP:WJG82244.1;Name=WJG82244.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=PUW38_05920;product=pyruvate kinase;protein_id=WJG82244.1;transl_table=11 CP118116.1 Genbank pseudogene 1248371 1249239 . - . ID=gene-PUW38_05925;Name=PUW38_05925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05925;pseudo=true CP118116.1 Protein Homology CDS 1248371 1249239 . - 0 ID=cds-PUW38_05925;Parent=gene-PUW38_05925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=PUW38_05925;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1249337 1249471 . + . ID=gene-PUW38_05930;Name=PUW38_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05930 CP118116.1 GeneMarkS-2+ CDS 1249337 1249471 . + 0 ID=cds-WJG82245.1;Parent=gene-PUW38_05930;Dbxref=NCBI_GP:WJG82245.1;Name=WJG82245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_05930;product=hypothetical protein;protein_id=WJG82245.1;transl_table=11 CP118116.1 Genbank gene 1249580 1251055 . + . ID=gene-PUW38_05935;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=PUW38_05935 CP118116.1 Protein Homology CDS 1249580 1251055 . + 0 ID=cds-WJG82246.1;Parent=gene-PUW38_05935;Dbxref=NCBI_GP:WJG82246.1;Name=WJG82246.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=PUW38_05935;product=glucose-6-phosphate dehydrogenase;protein_id=WJG82246.1;transl_table=11 CP118116.1 Genbank gene 1251290 1253101 . + . ID=gene-PUW38_05940;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=PUW38_05940 CP118116.1 Protein Homology CDS 1251290 1253101 . + 0 ID=cds-WJG82247.1;Parent=gene-PUW38_05940;Dbxref=NCBI_GP:WJG82247.1;Name=WJG82247.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=PUW38_05940;product=phosphogluconate dehydratase;protein_id=WJG82247.1;transl_table=11 CP118116.1 Genbank gene 1253139 1253780 . + . ID=gene-PUW38_05945;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=PUW38_05945 CP118116.1 Protein Homology CDS 1253139 1253780 . + 0 ID=cds-WJG82248.1;Parent=gene-PUW38_05945;Dbxref=NCBI_GP:WJG82248.1;Name=WJG82248.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=PUW38_05945;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WJG82248.1;transl_table=11 CP118116.1 Genbank gene 1253880 1255058 . - . ID=gene-PUW38_05950;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=PUW38_05950 CP118116.1 Protein Homology CDS 1253880 1255058 . - 0 ID=cds-WJG82249.1;Parent=gene-PUW38_05950;Dbxref=NCBI_GP:WJG82249.1;Name=WJG82249.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=PUW38_05950;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WJG82249.1;transl_table=11 CP118116.1 Genbank gene 1255189 1255479 . + . ID=gene-PUW38_05955;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=PUW38_05955 CP118116.1 Protein Homology CDS 1255189 1255479 . + 0 ID=cds-WJG82250.1;Parent=gene-PUW38_05955;Dbxref=NCBI_GP:WJG82250.1;Name=WJG82250.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=PUW38_05955;product=DNA damage-inducible protein YebG;protein_id=WJG82250.1;transl_table=11 CP118116.1 Genbank gene 1255547 1255900 . + . ID=gene-PUW38_05960;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=PUW38_05960 CP118116.1 Protein Homology CDS 1255547 1255900 . + 0 ID=cds-WJG82251.1;Parent=gene-PUW38_05960;Dbxref=NCBI_GP:WJG82251.1;Name=WJG82251.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=PUW38_05960;product=protein YebF;protein_id=WJG82251.1;transl_table=11 CP118116.1 Genbank pseudogene 1255994 1256651 . + . ID=gene-PUW38_05965;Name=PUW38_05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_05965;pseudo=true CP118116.1 Protein Homology CDS 1255994 1256651 . + 0 ID=cds-PUW38_05965;Parent=gene-PUW38_05965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=PUW38_05965;product=tellurite resistance TerB family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1256864 1258915 . + . ID=gene-PUW38_05970;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=PUW38_05970 CP118116.1 Protein Homology CDS 1256864 1258915 . + 0 ID=cds-WJG82252.1;Parent=gene-PUW38_05970;Dbxref=NCBI_GP:WJG82252.1;Name=WJG82252.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=PUW38_05970;product=oligopeptidase B;protein_id=WJG82252.1;transl_table=11 CP118116.1 Genbank gene 1258952 1259650 . - . ID=gene-PUW38_05975;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=PUW38_05975 CP118116.1 Protein Homology CDS 1258952 1259650 . - 0 ID=cds-WJG82253.1;Parent=gene-PUW38_05975;Dbxref=NCBI_GP:WJG82253.1;Name=WJG82253.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=PUW38_05975;product=exodeoxyribonuclease X;protein_id=WJG82253.1;transl_table=11 CP118116.1 Genbank gene 1259674 1260330 . - . ID=gene-PUW38_05980;Name=PUW38_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05980 CP118116.1 Protein Homology CDS 1259674 1260330 . - 0 ID=cds-WJG82254.1;Parent=gene-PUW38_05980;Dbxref=NCBI_GP:WJG82254.1;Name=WJG82254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=PUW38_05980;product=carbon-nitrogen hydrolase family protein;protein_id=WJG82254.1;transl_table=11 CP118116.1 Genbank gene 1260438 1260668 . - . ID=gene-PUW38_05985;Name=PUW38_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_05985 CP118116.1 Protein Homology CDS 1260438 1260668 . - 0 ID=cds-WJG82255.1;Parent=gene-PUW38_05985;Dbxref=NCBI_GP:WJG82255.1;Name=WJG82255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=PUW38_05985;product=DNA polymerase III subunit theta;protein_id=WJG82255.1;transl_table=11 CP118116.1 Genbank gene 1260806 1261180 . + . ID=gene-PUW38_05990;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=PUW38_05990 CP118116.1 Protein Homology CDS 1260806 1261180 . + 0 ID=cds-WJG82256.1;Parent=gene-PUW38_05990;Dbxref=NCBI_GP:WJG82256.1;Name=WJG82256.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=PUW38_05990;product=CopC domain-containing protein YobA;protein_id=WJG82256.1;transl_table=11 CP118116.1 Genbank gene 1261181 1262056 . + . ID=gene-PUW38_05995;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=PUW38_05995 CP118116.1 Protein Homology CDS 1261181 1262056 . + 0 ID=cds-WJG82257.1;Parent=gene-PUW38_05995;Dbxref=NCBI_GP:WJG82257.1;Name=WJG82257.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=PUW38_05995;product=copper homeostasis membrane protein CopD;protein_id=WJG82257.1;transl_table=11 CP118116.1 Genbank gene 1262073 1262237 . + . ID=gene-PUW38_06000;Name=PUW38_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06000 CP118116.1 GeneMarkS-2+ CDS 1262073 1262237 . + 0 ID=cds-WJG82258.1;Parent=gene-PUW38_06000;Dbxref=NCBI_GP:WJG82258.1;Name=WJG82258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_06000;product=DUF2511 domain-containing protein;protein_id=WJG82258.1;transl_table=11 CP118116.1 Genbank pseudogene 1262205 1262425 . + . ID=gene-PUW38_06005;Name=PUW38_06005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06005;pseudo=true CP118116.1 Protein Homology CDS 1262205 1262425 . + 2 ID=cds-PUW38_06005;Parent=gene-PUW38_06005;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022170.2;locus_tag=PUW38_06005;product=DUF2511 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1262808 1263887 . - . ID=gene-PUW38_06010;Name=PUW38_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06010 CP118116.1 Protein Homology CDS 1262808 1263887 . - 0 ID=cds-WJG82259.1;Parent=gene-PUW38_06010;Dbxref=NCBI_GP:WJG82259.1;Name=WJG82259.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=PUW38_06010;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WJG82259.1;transl_table=11 CP118116.1 Genbank gene 1263862 1264140 . - . ID=gene-PUW38_06015;Name=PUW38_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06015 CP118116.1 Protein Homology CDS 1263862 1264140 . - 0 ID=cds-WJG82260.1;Parent=gene-PUW38_06015;Dbxref=NCBI_GP:WJG82260.1;Name=WJG82260.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575998.1;locus_tag=PUW38_06015;product=excisionase;protein_id=WJG82260.1;transl_table=11 CP118116.1 Genbank gene 1264201 1264629 . - . ID=gene-PUW38_06020;Name=PUW38_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06020 CP118116.1 Protein Homology CDS 1264201 1264629 . - 0 ID=cds-WJG82261.1;Parent=gene-PUW38_06020;Dbxref=NCBI_GP:WJG82261.1;Name=WJG82261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743304.1;locus_tag=PUW38_06020;product=hypothetical protein;protein_id=WJG82261.1;transl_table=11 CP118116.1 Genbank gene 1264728 1264913 . - . ID=gene-PUW38_06025;Name=PUW38_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06025 CP118116.1 Protein Homology CDS 1264728 1264913 . - 0 ID=cds-WJG82262.1;Parent=gene-PUW38_06025;Dbxref=NCBI_GP:WJG82262.1;Name=WJG82262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280163.1;locus_tag=PUW38_06025;product=DUF1187 family protein;protein_id=WJG82262.1;transl_table=11 CP118116.1 Genbank gene 1264960 1265790 . - . ID=gene-PUW38_06030;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=PUW38_06030 CP118116.1 Protein Homology CDS 1264960 1265790 . - 0 ID=cds-WJG83179.1;Parent=gene-PUW38_06030;Dbxref=NCBI_GP:WJG83179.1;Name=WJG83179.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126028.1;locus_tag=PUW38_06030;product=recombination protein RecT;protein_id=WJG83179.1;transl_table=11 CP118116.1 Genbank gene 1265783 1268473 . - . ID=gene-PUW38_06035;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=PUW38_06035 CP118116.1 Protein Homology CDS 1265783 1268473 . - 0 ID=cds-WJG82263.1;Parent=gene-PUW38_06035;Dbxref=NCBI_GP:WJG82263.1;Name=WJG82263.1;Ontology_term=GO:0090305,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' exodeoxyribonuclease activity|0051908||IEA;go_process=nucleic acid phosphodiester bond hydrolysis|0090305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=PUW38_06035;product=exodeoxyribonuclease VIII;protein_id=WJG82263.1;transl_table=11 CP118116.1 Genbank gene 1268614 1268949 . - . ID=gene-PUW38_06040;Name=PUW38_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06040 CP118116.1 Protein Homology CDS 1268614 1268949 . - 0 ID=cds-WJG82264.1;Parent=gene-PUW38_06040;Dbxref=NCBI_GP:WJG82264.1;Name=WJG82264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799630.1;locus_tag=PUW38_06040;product=hypothetical protein;protein_id=WJG82264.1;transl_table=11 CP118116.1 Genbank gene 1269025 1269231 . - . ID=gene-PUW38_06045;Name=PUW38_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06045 CP118116.1 Protein Homology CDS 1269025 1269231 . - 0 ID=cds-WJG82265.1;Parent=gene-PUW38_06045;Dbxref=NCBI_GP:WJG82265.1;Name=WJG82265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=PUW38_06045;product=cell division inhibitor protein;protein_id=WJG82265.1;transl_table=11 CP118116.1 Genbank gene 1269235 1269510 . - . ID=gene-PUW38_06050;Name=PUW38_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06050 CP118116.1 Protein Homology CDS 1269235 1269510 . - 0 ID=cds-WJG82266.1;Parent=gene-PUW38_06050;Dbxref=NCBI_GP:WJG82266.1;Name=WJG82266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103933.1;locus_tag=PUW38_06050;product=hypothetical protein;protein_id=WJG82266.1;transl_table=11 CP118116.1 Genbank gene 1269845 1270075 . + . ID=gene-PUW38_06055;Name=PUW38_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06055 CP118116.1 GeneMarkS-2+ CDS 1269845 1270075 . + 0 ID=cds-WJG82267.1;Parent=gene-PUW38_06055;Dbxref=NCBI_GP:WJG82267.1;Name=WJG82267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_06055;product=hypothetical protein;protein_id=WJG82267.1;transl_table=11 CP118116.1 Genbank gene 1270516 1270914 . - . ID=gene-PUW38_06060;Name=PUW38_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06060 CP118116.1 Protein Homology CDS 1270516 1270914 . - 0 ID=cds-WJG82268.1;Parent=gene-PUW38_06060;Dbxref=NCBI_GP:WJG82268.1;Name=WJG82268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574209.1;locus_tag=PUW38_06060;product=helix-turn-helix domain-containing protein;protein_id=WJG82268.1;transl_table=11 CP118116.1 Genbank gene 1271013 1271267 . + . ID=gene-PUW38_06065;Name=PUW38_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06065 CP118116.1 Protein Homology CDS 1271013 1271267 . + 0 ID=cds-WJG82269.1;Parent=gene-PUW38_06065;Dbxref=NCBI_GP:WJG82269.1;Name=WJG82269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462799.1;locus_tag=PUW38_06065;product=helix-turn-helix transcriptional regulator;protein_id=WJG82269.1;transl_table=11 CP118116.1 Genbank gene 1271254 1271748 . + . ID=gene-PUW38_06070;Name=PUW38_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06070 CP118116.1 Protein Homology CDS 1271254 1271748 . + 0 ID=cds-WJG82270.1;Parent=gene-PUW38_06070;Dbxref=NCBI_GP:WJG82270.1;Name=WJG82270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533160.1;locus_tag=PUW38_06070;product=toxin YdaT family protein;protein_id=WJG82270.1;transl_table=11 CP118116.1 Genbank gene 1271795 1272793 . + . ID=gene-PUW38_06075;Name=PUW38_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06075 CP118116.1 Protein Homology CDS 1271795 1272793 . + 0 ID=cds-WJG82271.1;Parent=gene-PUW38_06075;Dbxref=NCBI_GP:WJG82271.1;Name=WJG82271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729543.1;locus_tag=PUW38_06075;product=DUF1376 domain-containing protein;protein_id=WJG82271.1;transl_table=11 CP118116.1 Genbank gene 1272705 1273247 . + . ID=gene-PUW38_06080;Name=PUW38_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06080 CP118116.1 Protein Homology CDS 1272705 1273247 . + 0 ID=cds-WJG82272.1;Parent=gene-PUW38_06080;Dbxref=NCBI_GP:WJG82272.1;Name=WJG82272.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307798.1;locus_tag=PUW38_06080;product=replication protein P;protein_id=WJG82272.1;transl_table=11 CP118116.1 Genbank gene 1273260 1273655 . + . ID=gene-PUW38_06085;Name=PUW38_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06085 CP118116.1 Protein Homology CDS 1273260 1273655 . + 0 ID=cds-WJG82273.1;Parent=gene-PUW38_06085;Dbxref=NCBI_GP:WJG82273.1;Name=WJG82273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=PUW38_06085;product=DUF977 family protein;protein_id=WJG82273.1;transl_table=11 CP118116.1 Genbank gene 1273942 1275072 . - . ID=gene-PUW38_06090;Name=PUW38_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06090 CP118116.1 Protein Homology CDS 1273942 1275072 . - 0 ID=cds-WJG82274.1;Parent=gene-PUW38_06090;Dbxref=NCBI_GP:WJG82274.1;Name=WJG82274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=PUW38_06090;product=GGDEF domain-containing protein;protein_id=WJG82274.1;transl_table=11 CP118116.1 Genbank gene 1275469 1277448 . + . ID=gene-PUW38_06095;Name=PUW38_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06095 CP118116.1 Protein Homology CDS 1275469 1277448 . + 0 ID=cds-WJG82275.1;Parent=gene-PUW38_06095;Dbxref=NCBI_GP:WJG82275.1;Name=WJG82275.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078314.1;locus_tag=PUW38_06095;product=alkyl sulfatase dimerization domain-containing protein;protein_id=WJG82275.1;transl_table=11 CP118116.1 Genbank gene 1277767 1277865 . + . ID=gene-PUW38_06100;Name=PUW38_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06100 CP118116.1 Protein Homology CDS 1277767 1277865 . + 0 ID=cds-WJG83180.1;Parent=gene-PUW38_06100;Dbxref=NCBI_GP:WJG83180.1;Name=WJG83180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=PUW38_06100;product=hypothetical protein;protein_id=WJG83180.1;transl_table=11 CP118116.1 Genbank gene 1278167 1278385 . + . ID=gene-PUW38_06105;Name=PUW38_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06105 CP118116.1 Protein Homology CDS 1278167 1278385 . + 0 ID=cds-WJG82276.1;Parent=gene-PUW38_06105;Dbxref=NCBI_GP:WJG82276.1;Name=WJG82276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524708.1;locus_tag=PUW38_06105;product=hypothetical protein;protein_id=WJG82276.1;transl_table=11 CP118116.1 Genbank gene 1278449 1279048 . + . ID=gene-PUW38_06110;Name=PUW38_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06110 CP118116.1 Protein Homology CDS 1278449 1279048 . + 0 ID=cds-WJG82277.1;Parent=gene-PUW38_06110;Dbxref=NCBI_GP:WJG82277.1;Name=WJG82277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=PUW38_06110;product=DUF1367 family protein;protein_id=WJG82277.1;transl_table=11 CP118116.1 Genbank gene 1279051 1279272 . + . ID=gene-PUW38_06115;Name=PUW38_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06115 CP118116.1 Protein Homology CDS 1279051 1279272 . + 0 ID=cds-WJG83181.1;Parent=gene-PUW38_06115;Dbxref=NCBI_GP:WJG83181.1;Name=WJG83181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096570.1;locus_tag=PUW38_06115;product=recombination protein NinG;protein_id=WJG83181.1;transl_table=11 CP118116.1 Genbank pseudogene 1279269 1279405 . + . ID=gene-PUW38_06120;Name=PUW38_06120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06120;pseudo=true CP118116.1 Protein Homology CDS 1279269 1279405 . + 0 ID=cds-PUW38_06120;Parent=gene-PUW38_06120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971070.1;locus_tag=PUW38_06120;product=YlcG family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1279402 1280091 . + . ID=gene-PUW38_06125;Name=PUW38_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06125 CP118116.1 Protein Homology CDS 1279402 1280091 . + 0 ID=cds-WJG82278.1;Parent=gene-PUW38_06125;Dbxref=NCBI_GP:WJG82278.1;Name=WJG82278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151283.1;locus_tag=PUW38_06125;product=bacteriophage antitermination protein Q;protein_id=WJG82278.1;transl_table=11 CP118116.1 Genbank gene 1280185 1280712 . + . ID=gene-PUW38_06130;Name=PUW38_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06130 CP118116.1 Protein Homology CDS 1280185 1280712 . + 0 ID=cds-WJG82279.1;Parent=gene-PUW38_06130;Dbxref=NCBI_GP:WJG82279.1;Name=WJG82279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971762.1;locus_tag=PUW38_06130;product=hypothetical protein;protein_id=WJG82279.1;transl_table=11 CP118116.1 Genbank gene 1281086 1281535 . - . ID=gene-PUW38_06135;Name=PUW38_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06135 CP118116.1 Protein Homology CDS 1281086 1281535 . - 0 ID=cds-WJG82280.1;Parent=gene-PUW38_06135;Dbxref=NCBI_GP:WJG82280.1;Name=WJG82280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460000.1;locus_tag=PUW38_06135;product=hypothetical protein;protein_id=WJG82280.1;transl_table=11 CP118116.1 Genbank gene 1281896 1282582 . - . ID=gene-PUW38_06140;Name=gtgA;gbkey=Gene;gene=gtgA;gene_biotype=protein_coding;locus_tag=PUW38_06140 CP118116.1 Protein Homology CDS 1281896 1282582 . - 0 ID=cds-WJG82281.1;Parent=gene-PUW38_06140;Dbxref=NCBI_GP:WJG82281.1;Name=WJG82281.1;gbkey=CDS;gene=gtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461550.1;locus_tag=PUW38_06140;product=type III secretion system effector protease GtgA;protein_id=WJG82281.1;transl_table=11 CP118116.1 Genbank gene 1282858 1283187 . + . ID=gene-PUW38_06145;Name=PUW38_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06145 CP118116.1 Protein Homology CDS 1282858 1283187 . + 0 ID=cds-WJG83182.1;Parent=gene-PUW38_06145;Dbxref=NCBI_GP:WJG83182.1;Name=WJG83182.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461549.1;locus_tag=PUW38_06145;product=phage holin%2C lambda family;protein_id=WJG83182.1;transl_table=11 CP118116.1 Genbank gene 1283171 1283623 . + . ID=gene-PUW38_06150;Name=PUW38_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06150 CP118116.1 Protein Homology CDS 1283171 1283623 . + 0 ID=cds-WJG82282.1;Parent=gene-PUW38_06150;Dbxref=NCBI_GP:WJG82282.1;Name=WJG82282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460003.1;locus_tag=PUW38_06150;product=lysozyme;protein_id=WJG82282.1;transl_table=11 CP118116.1 Genbank gene 1283641 1284120 . + . ID=gene-PUW38_06155;Name=PUW38_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06155 CP118116.1 Protein Homology CDS 1283641 1284120 . + 0 ID=cds-WJG82283.1;Parent=gene-PUW38_06155;Dbxref=NCBI_GP:WJG82283.1;Name=WJG82283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460004.1;locus_tag=PUW38_06155;product=lysis protein;protein_id=WJG82283.1;transl_table=11 CP118116.1 Genbank pseudogene 1284328 1284860 . + . ID=gene-PUW38_06160;Name=PUW38_06160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06160;pseudo=true CP118116.1 Protein Homology CDS 1284328 1284860 . + 0 ID=cds-PUW38_06160;Parent=gene-PUW38_06160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460005.1;locus_tag=PUW38_06160;product=DUF1441 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1284817 1286955 . + . ID=gene-PUW38_06165;Name=PUW38_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06165 CP118116.1 Protein Homology CDS 1284817 1286955 . + 0 ID=cds-WJG83183.1;Parent=gene-PUW38_06165;Dbxref=NCBI_GP:WJG83183.1;Name=WJG83183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460006.1;locus_tag=PUW38_06165;product=phage terminase large subunit family protein;protein_id=WJG83183.1;transl_table=11 CP118116.1 Genbank gene 1286952 1287158 . + . ID=gene-PUW38_06170;Name=PUW38_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06170 CP118116.1 Protein Homology CDS 1286952 1287158 . + 0 ID=cds-WJG82284.1;Parent=gene-PUW38_06170;Dbxref=NCBI_GP:WJG82284.1;Name=WJG82284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196190.1;locus_tag=PUW38_06170;product=primosomal replication protein PriB/PriC domain protein;protein_id=WJG82284.1;transl_table=11 CP118116.1 Genbank gene 1287181 1288701 . + . ID=gene-PUW38_06175;Name=PUW38_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06175 CP118116.1 Protein Homology CDS 1287181 1288701 . + 0 ID=cds-WJG82285.1;Parent=gene-PUW38_06175;Dbxref=NCBI_GP:WJG82285.1;Name=WJG82285.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009205.1;locus_tag=PUW38_06175;product=phage portal protein;protein_id=WJG82285.1;transl_table=11 CP118116.1 Genbank pseudogene 1288625 1290705 . + . ID=gene-PUW38_06180;Name=PUW38_06180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06180;pseudo=true CP118116.1 Protein Homology CDS 1288625 1290705 . + 0 ID=cds-PUW38_06180;Parent=gene-PUW38_06180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460008.1;locus_tag=PUW38_06180;product=Clp protease ClpP;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1290796 1291119 . + . ID=gene-PUW38_06185;Name=PUW38_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06185 CP118116.1 Protein Homology CDS 1290796 1291119 . + 0 ID=cds-WJG82286.1;Parent=gene-PUW38_06185;Dbxref=NCBI_GP:WJG82286.1;Name=WJG82286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460009.1;locus_tag=PUW38_06185;product=DUF2190 family protein;protein_id=WJG82286.1;transl_table=11 CP118116.1 Genbank gene 1291112 1291411 . + . ID=gene-PUW38_06190;Name=PUW38_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06190 CP118116.1 Protein Homology CDS 1291112 1291411 . + 0 ID=cds-WJG82287.1;Parent=gene-PUW38_06190;Dbxref=NCBI_GP:WJG82287.1;Name=WJG82287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460010.1;locus_tag=PUW38_06190;product=ATP-binding protein;protein_id=WJG82287.1;transl_table=11 CP118116.1 Genbank gene 1291392 1291958 . + . ID=gene-PUW38_06195;Name=PUW38_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06195 CP118116.1 Protein Homology CDS 1291392 1291958 . + 0 ID=cds-WJG82288.1;Parent=gene-PUW38_06195;Dbxref=NCBI_GP:WJG82288.1;Name=WJG82288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460011.1;locus_tag=PUW38_06195;product=phage tail protein;protein_id=WJG82288.1;transl_table=11 CP118116.1 Genbank gene 1291955 1292356 . + . ID=gene-PUW38_06200;Name=PUW38_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06200 CP118116.1 Protein Homology CDS 1291955 1292356 . + 0 ID=cds-WJG82289.1;Parent=gene-PUW38_06200;Dbxref=NCBI_GP:WJG82289.1;Name=WJG82289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460012.1;locus_tag=PUW38_06200;product=phage minor tail U family protein;protein_id=WJG82289.1;transl_table=11 CP118116.1 Genbank gene 1292368 1293117 . + . ID=gene-PUW38_06205;Name=PUW38_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06205 CP118116.1 Protein Homology CDS 1292368 1293117 . + 0 ID=cds-WJG82290.1;Parent=gene-PUW38_06205;Dbxref=NCBI_GP:WJG82290.1;Name=WJG82290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460013.1;locus_tag=PUW38_06205;product=phage tail protein;protein_id=WJG82290.1;transl_table=11 CP118116.1 Genbank gene 1293163 1293561 . + . ID=gene-PUW38_06210;Name=PUW38_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06210 CP118116.1 Protein Homology CDS 1293163 1293561 . + 0 ID=cds-WJG82291.1;Parent=gene-PUW38_06210;Dbxref=NCBI_GP:WJG82291.1;Name=WJG82291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460014.1;locus_tag=PUW38_06210;product=phage minor tail protein G;protein_id=WJG82291.1;transl_table=11 CP118116.1 Genbank gene 1293558 1293887 . + . ID=gene-PUW38_06215;Name=PUW38_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06215 CP118116.1 Protein Homology CDS 1293558 1293887 . + 0 ID=cds-WJG83184.1;Parent=gene-PUW38_06215;Dbxref=NCBI_GP:WJG83184.1;Name=WJG83184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460015.1;locus_tag=PUW38_06215;product=phage tail assembly protein T;protein_id=WJG83184.1;transl_table=11 CP118116.1 Genbank pseudogene 1293967 1296953 . + . ID=gene-PUW38_06220;Name=PUW38_06220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06220;pseudo=true CP118116.1 Protein Homology CDS 1293967 1296953 . + 0 ID=cds-PUW38_06220;Parent=gene-PUW38_06220;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460016.1;locus_tag=PUW38_06220;product=phage tail tape measure protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1296950 1297282 . + . ID=gene-PUW38_06225;Name=PUW38_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06225 CP118116.1 Protein Homology CDS 1296950 1297282 . + 0 ID=cds-WJG82292.1;Parent=gene-PUW38_06225;Dbxref=NCBI_GP:WJG82292.1;Name=WJG82292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460017.1;locus_tag=PUW38_06225;product=phage tail protein;protein_id=WJG82292.1;transl_table=11 CP118116.1 Genbank gene 1297381 1297878 . + . ID=gene-PUW38_06230;Name=PUW38_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06230 CP118116.1 Protein Homology CDS 1297381 1297878 . + 0 ID=cds-WJG82293.1;Parent=gene-PUW38_06230;Dbxref=NCBI_GP:WJG82293.1;Name=WJG82293.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410972.1;locus_tag=PUW38_06230;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WJG82293.1;transl_table=11 CP118116.1 Genbank gene 1297995 1298528 . - . ID=gene-PUW38_06235;Name=sodC1;gbkey=Gene;gene=sodC1;gene_biotype=protein_coding;gene_synonym=sodCI;locus_tag=PUW38_06235 CP118116.1 Protein Homology CDS 1297995 1298528 . - 0 ID=cds-WJG82294.1;Parent=gene-PUW38_06235;Dbxref=NCBI_GP:WJG82294.1;Name=WJG82294.1;gbkey=CDS;gene=sodC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460019.1;locus_tag=PUW38_06235;product=superoxide dismutase [Cu-Zn] SodC1;protein_id=WJG82294.1;transl_table=11 CP118116.1 Genbank gene 1298618 1299313 . + . ID=gene-PUW38_06240;Name=PUW38_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06240 CP118116.1 Protein Homology CDS 1298618 1299313 . + 0 ID=cds-WJG82295.1;Parent=gene-PUW38_06240;Dbxref=NCBI_GP:WJG82295.1;Name=WJG82295.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460020.1;locus_tag=PUW38_06240;product=phage minor tail protein L;protein_id=WJG82295.1;transl_table=11 CP118116.1 Genbank gene 1299323 1300054 . + . ID=gene-PUW38_06245;Name=PUW38_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06245 CP118116.1 Protein Homology CDS 1299323 1300054 . + 0 ID=cds-WJG82296.1;Parent=gene-PUW38_06245;Dbxref=NCBI_GP:WJG82296.1;Name=WJG82296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606352.1;locus_tag=PUW38_06245;product=C40 family peptidase;protein_id=WJG82296.1;transl_table=11 CP118116.1 Genbank gene 1299958 1300662 . + . ID=gene-PUW38_06250;Name=PUW38_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06250 CP118116.1 Protein Homology CDS 1299958 1300662 . + 0 ID=cds-WJG82297.1;Parent=gene-PUW38_06250;Dbxref=NCBI_GP:WJG82297.1;Name=WJG82297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460022.1;locus_tag=PUW38_06250;product=tail assembly protein;protein_id=WJG82297.1;transl_table=11 CP118116.1 Genbank pseudogene 1300734 1303185 . + . ID=gene-PUW38_06255;Name=PUW38_06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06255;pseudo=true CP118116.1 Protein Homology CDS 1300734 1303185 . + 0 ID=cds-PUW38_06255;Parent=gene-PUW38_06255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=PUW38_06255;product=host specificity protein J;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1303255 1303437 . + . ID=gene-PUW38_06260;Name=PUW38_06260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06260;pseudo=true CP118116.1 Protein Homology CDS 1303255 1303437 . + 0 ID=cds-PUW38_06260;Parent=gene-PUW38_06260;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020885.2;locus_tag=PUW38_06260;product=DUF1983 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1303495 1304088 . + . ID=gene-PUW38_06265;Name=PUW38_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06265 CP118116.1 Protein Homology CDS 1303495 1304088 . + 0 ID=cds-WJG83185.1;Parent=gene-PUW38_06265;Dbxref=NCBI_GP:WJG83185.1;Name=WJG83185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023837.2;locus_tag=PUW38_06265;product=hypothetical protein;protein_id=WJG83185.1;transl_table=11 CP118116.1 Genbank gene 1304133 1304369 . + . ID=gene-PUW38_06270;Name=PUW38_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06270 CP118116.1 Protein Homology CDS 1304133 1304369 . + 0 ID=cds-WJG82298.1;Parent=gene-PUW38_06270;Dbxref=NCBI_GP:WJG82298.1;Name=WJG82298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533254.1;locus_tag=PUW38_06270;product=hypothetical protein;protein_id=WJG82298.1;transl_table=11 CP118116.1 Genbank pseudogene 1304423 1306389 . + . ID=gene-PUW38_06275;Name=PUW38_06275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06275;pseudo=true CP118116.1 Protein Homology CDS 1304423 1306389 . + 0 ID=cds-PUW38_06275;Parent=gene-PUW38_06275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=PUW38_06275;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1306389 1306958 . + . ID=gene-PUW38_06280;Name=PUW38_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06280 CP118116.1 Protein Homology CDS 1306389 1306958 . + 0 ID=cds-WJG82299.1;Parent=gene-PUW38_06280;Dbxref=NCBI_GP:WJG82299.1;Name=WJG82299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143180.1;locus_tag=PUW38_06280;product=tail fiber assembly protein;protein_id=WJG82299.1;transl_table=11 CP118116.1 Genbank gene 1307160 1307882 . - . ID=gene-PUW38_06285;Name=sopE;gbkey=Gene;gene=sopE;gene_biotype=protein_coding;locus_tag=PUW38_06285 CP118116.1 Protein Homology CDS 1307160 1307882 . - 0 ID=cds-WJG82300.1;Parent=gene-PUW38_06285;Dbxref=NCBI_GP:WJG82300.1;Name=WJG82300.1;gbkey=CDS;gene=sopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161707.1;locus_tag=PUW38_06285;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE;protein_id=WJG82300.1;transl_table=11 CP118116.1 Genbank pseudogene 1308092 1308333 . + . ID=gene-PUW38_06290;Name=PUW38_06290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06290;pseudo=true CP118116.1 Protein Homology CDS 1308092 1308333 . + 0 ID=cds-PUW38_06290;Parent=gene-PUW38_06290;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239587.1;locus_tag=PUW38_06290;product=recombinase family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1308362 1309162 . - . ID=gene-PUW38_06295;Name=PUW38_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06295 CP118116.1 Protein Homology CDS 1308362 1309162 . - 0 ID=cds-WJG82301.1;Parent=gene-PUW38_06295;Dbxref=NCBI_GP:WJG82301.1;Name=WJG82301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586172.1;locus_tag=PUW38_06295;product=hypothetical protein;protein_id=WJG82301.1;transl_table=11 CP118116.1 Genbank pseudogene 1310107 1311029 . - . ID=gene-PUW38_06300;Name=PUW38_06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06300;pseudo=true CP118116.1 Protein Homology CDS 1310107 1311029 . - 0 ID=cds-PUW38_06300;Parent=gene-PUW38_06300;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=PUW38_06300;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1311293 1311754 . - . ID=gene-PUW38_06305;Name=PUW38_06305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06305;pseudo=true CP118116.1 Protein Homology CDS 1311293 1311754 . - 0 ID=cds-PUW38_06305;Parent=gene-PUW38_06305;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023715.1;locus_tag=PUW38_06305;product=DNA breaking-rejoining protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1311743 1311934 . + . ID=gene-PUW38_06310;Name=PUW38_06310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06310;pseudo=true CP118116.1 Protein Homology CDS 1311743 1311934 . + 0 ID=cds-PUW38_06310;Parent=gene-PUW38_06310;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=PUW38_06310;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1311988 1312519 . + . ID=gene-PUW38_06315;Name=PUW38_06315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06315;pseudo=true CP118116.1 Protein Homology CDS 1311988 1312519 . + 0 ID=cds-PUW38_06315;Parent=gene-PUW38_06315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=PUW38_06315;product=DUF2514 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1312776 1312943 . - . ID=gene-PUW38_06320;Name=PUW38_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06320 CP118116.1 Protein Homology CDS 1312776 1312943 . - 0 ID=cds-WJG82302.1;Parent=gene-PUW38_06320;Dbxref=NCBI_GP:WJG82302.1;Name=WJG82302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=PUW38_06320;product=lytic enzyme;protein_id=WJG82302.1;transl_table=11 CP118116.1 Genbank gene 1313007 1313195 . - . ID=gene-PUW38_06325;Name=PUW38_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06325 CP118116.1 Protein Homology CDS 1313007 1313195 . - 0 ID=cds-WJG82303.1;Parent=gene-PUW38_06325;Dbxref=NCBI_GP:WJG82303.1;Name=WJG82303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=PUW38_06325;product=hypothetical protein;protein_id=WJG82303.1;transl_table=11 CP118116.1 Genbank gene 1313250 1313741 . + . ID=gene-PUW38_06330;Name=PUW38_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06330 CP118116.1 Protein Homology CDS 1313250 1313741 . + 0 ID=cds-WJG82304.1;Parent=gene-PUW38_06330;Dbxref=NCBI_GP:WJG82304.1;Name=WJG82304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=PUW38_06330;product=DUF1441 family protein;protein_id=WJG82304.1;transl_table=11 CP118116.1 Genbank pseudogene 1313728 1314295 . + . ID=gene-PUW38_06335;Name=PUW38_06335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06335;pseudo=true CP118116.1 Protein Homology CDS 1313728 1314295 . + 0 ID=cds-PUW38_06335;Parent=gene-PUW38_06335;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=PUW38_06335;product=phage terminase large subunit family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1314294 1315524 . + . ID=gene-PUW38_06340;Name=PUW38_06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06340;pseudo=true CP118116.1 Protein Homology CDS 1314294 1315524 . + 0 ID=cds-PUW38_06340;Parent=gene-PUW38_06340;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=PUW38_06340;product=tail fiber protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1315534 1315821 . + . ID=gene-PUW38_06345;Name=PUW38_06345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06345;pseudo=true CP118116.1 Protein Homology CDS 1315534 1315821 . + 0 ID=cds-PUW38_06345;Parent=gene-PUW38_06345;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013798.2;locus_tag=PUW38_06345;product=macro domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1315834 1316345 . + . ID=gene-PUW38_06350;Name=PUW38_06350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06350;pseudo=true CP118116.1 Protein Homology CDS 1315834 1316345 . + 0 ID=cds-PUW38_06350;Parent=gene-PUW38_06350;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=PUW38_06350;product=tail fiber assembly protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1316442 1316642 . - . ID=gene-PUW38_06355;Name=PUW38_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06355 CP118116.1 Protein Homology CDS 1316442 1316642 . - 0 ID=cds-WJG82305.1;Parent=gene-PUW38_06355;Dbxref=NCBI_GP:WJG82305.1;Name=WJG82305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=PUW38_06355;product=PagK family vesicle-borne virulence factor;protein_id=WJG82305.1;transl_table=11 CP118116.1 Genbank pseudogene 1317031 1317211 . - . ID=gene-PUW38_06360;Name=PUW38_06360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06360;pseudo=true CP118116.1 Protein Homology CDS 1317031 1317211 . - 0 ID=cds-PUW38_06360;Parent=gene-PUW38_06360;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=PUW38_06360;product=IS3 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1317211 1317336 . + . ID=gene-PUW38_06365;Name=PUW38_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06365 CP118116.1 Protein Homology CDS 1317211 1317336 . + 0 ID=cds-WJG82306.1;Parent=gene-PUW38_06365;Dbxref=NCBI_GP:WJG82306.1;Name=WJG82306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=PUW38_06365;product=arsenic transporter;protein_id=WJG82306.1;transl_table=11 CP118116.1 Genbank gene 1317850 1317996 . - . ID=gene-PUW38_06370;Name=PUW38_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06370 CP118116.1 Protein Homology CDS 1317850 1317996 . - 0 ID=cds-WJG82307.1;Parent=gene-PUW38_06370;Dbxref=NCBI_GP:WJG82307.1;Name=WJG82307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537204.1;locus_tag=PUW38_06370;product=hypothetical protein;protein_id=WJG82307.1;transl_table=11 CP118116.1 Genbank gene 1317990 1318157 . + . ID=gene-PUW38_06375;Name=PUW38_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06375 CP118116.1 Protein Homology CDS 1317990 1318157 . + 0 ID=cds-WJG82308.1;Parent=gene-PUW38_06375;Dbxref=NCBI_GP:WJG82308.1;Name=WJG82308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014814.2;locus_tag=PUW38_06375;product=helix-turn-helix domain-containing protein;protein_id=WJG82308.1;transl_table=11 CP118116.1 Genbank gene 1318484 1319098 . - . ID=gene-PUW38_06380;Name=PUW38_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06380 CP118116.1 Protein Homology CDS 1318484 1319098 . - 0 ID=cds-WJG82309.1;Parent=gene-PUW38_06380;Dbxref=NCBI_GP:WJG82309.1;Name=WJG82309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=PUW38_06380;product=disulfide bond formation protein B;protein_id=WJG82309.1;transl_table=11 CP118116.1 Genbank gene 1319108 1319266 . - . ID=gene-PUW38_06385;Name=PUW38_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06385 CP118116.1 Protein Homology CDS 1319108 1319266 . - 0 ID=cds-WJG82310.1;Parent=gene-PUW38_06385;Dbxref=NCBI_GP:WJG82310.1;Name=WJG82310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=PUW38_06385;product=DUF5993 family protein;protein_id=WJG82310.1;transl_table=11 CP118116.1 Genbank gene 1319399 1320313 . - . ID=gene-PUW38_06390;Name=PUW38_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06390 CP118116.1 Protein Homology CDS 1319399 1320313 . - 0 ID=cds-WJG82311.1;Parent=gene-PUW38_06390;Dbxref=NCBI_GP:WJG82311.1;Name=WJG82311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=PUW38_06390;product=DMT family transporter;protein_id=WJG82311.1;transl_table=11 CP118116.1 Genbank pseudogene 1321564 1322030 . - . ID=gene-PUW38_06395;Name=PUW38_06395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06395;pseudo=true CP118116.1 Protein Homology CDS 1321564 1322030 . - 0 ID=cds-PUW38_06395;Parent=gene-PUW38_06395;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=PUW38_06395;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1322100 1323307 . + . ID=gene-PUW38_06400;Name=PUW38_06400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06400;pseudo=true CP118116.1 Protein Homology CDS 1322100 1323307 . + 0 ID=cds-PUW38_06400;Parent=gene-PUW38_06400;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=PUW38_06400;product=IS256 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1323453 1323593 . - . ID=gene-PUW38_06405;Name=PUW38_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06405 CP118116.1 Protein Homology CDS 1323453 1323593 . - 0 ID=cds-WJG82312.1;Parent=gene-PUW38_06405;Dbxref=NCBI_GP:WJG82312.1;Name=WJG82312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=PUW38_06405;product=hypothetical protein;protein_id=WJG82312.1;transl_table=11 CP118116.1 Genbank gene 1323759 1324028 . - . ID=gene-PUW38_06410;Name=PUW38_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06410 CP118116.1 Protein Homology CDS 1323759 1324028 . - 0 ID=cds-WJG82313.1;Parent=gene-PUW38_06410;Dbxref=NCBI_GP:WJG82313.1;Name=WJG82313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=PUW38_06410;product=hypothetical protein;protein_id=WJG82313.1;transl_table=11 CP118116.1 Genbank gene 1324401 1324820 . + . ID=gene-PUW38_06415;Name=PUW38_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06415 CP118116.1 Protein Homology CDS 1324401 1324820 . + 0 ID=cds-WJG82314.1;Parent=gene-PUW38_06415;Dbxref=NCBI_GP:WJG82314.1;Name=WJG82314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=PUW38_06415;product=GNAT family N-acetyltransferase;protein_id=WJG82314.1;transl_table=11 CP118116.1 Genbank gene 1325193 1325669 . - . ID=gene-PUW38_06420;Name=PUW38_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06420 CP118116.1 Protein Homology CDS 1325193 1325669 . - 0 ID=cds-WJG82315.1;Parent=gene-PUW38_06420;Dbxref=NCBI_GP:WJG82315.1;Name=WJG82315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=PUW38_06420;product=hypothetical protein;protein_id=WJG82315.1;transl_table=11 CP118116.1 Genbank gene 1325999 1326394 . - . ID=gene-PUW38_06425;Name=PUW38_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06425 CP118116.1 Protein Homology CDS 1325999 1326394 . - 0 ID=cds-WJG82316.1;Parent=gene-PUW38_06425;Dbxref=NCBI_GP:WJG82316.1;Name=WJG82316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=PUW38_06425;product=DUF1398 domain-containing protein;protein_id=WJG82316.1;transl_table=11 CP118116.1 Genbank gene 1327078 1327800 . + . ID=gene-PUW38_06430;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=PUW38_06430 CP118116.1 Protein Homology CDS 1327078 1327800 . + 0 ID=cds-WJG82317.1;Parent=gene-PUW38_06430;Dbxref=NCBI_GP:WJG82317.1;Name=WJG82317.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=PUW38_06430;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WJG82317.1;transl_table=11 CP118116.1 Genbank gene 1328085 1328249 . + . ID=gene-PUW38_06435;Name=PUW38_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06435 CP118116.1 Protein Homology CDS 1328085 1328249 . + 0 ID=cds-WJG82318.1;Parent=gene-PUW38_06435;Dbxref=NCBI_GP:WJG82318.1;Name=WJG82318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=PUW38_06435;product=hypothetical protein;protein_id=WJG82318.1;transl_table=11 CP118116.1 Genbank gene 1328473 1329123 . + . ID=gene-PUW38_06440;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=PUW38_06440 CP118116.1 Protein Homology CDS 1328473 1329123 . + 0 ID=cds-WJG82319.1;Parent=gene-PUW38_06440;Dbxref=NCBI_GP:WJG82319.1;Name=WJG82319.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=PUW38_06440;product=protein-serine/threonine phosphatase;protein_id=WJG82319.1;transl_table=11 CP118116.1 Genbank gene 1329142 1329333 . - . ID=gene-PUW38_06445;Name=PUW38_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06445 CP118116.1 Protein Homology CDS 1329142 1329333 . - 0 ID=cds-WJG82320.1;Parent=gene-PUW38_06445;Dbxref=NCBI_GP:WJG82320.1;Name=WJG82320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=PUW38_06445;product=YebW family protein;protein_id=WJG82320.1;transl_table=11 CP118116.1 Genbank gene 1329444 1329680 . - . ID=gene-PUW38_06450;Name=PUW38_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06450 CP118116.1 Protein Homology CDS 1329444 1329680 . - 0 ID=cds-WJG83186.1;Parent=gene-PUW38_06450;Dbxref=NCBI_GP:WJG83186.1;Name=WJG83186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=PUW38_06450;product=YebV family protein;protein_id=WJG83186.1;transl_table=11 CP118116.1 Genbank gene 1329798 1331237 . - . ID=gene-PUW38_06455;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=PUW38_06455 CP118116.1 Protein Homology CDS 1329798 1331237 . - 0 ID=cds-WJG82321.1;Parent=gene-PUW38_06455;Dbxref=NCBI_GP:WJG82321.1;Name=WJG82321.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=PUW38_06455;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WJG82321.1;transl_table=11 CP118116.1 Genbank pseudogene 1331315 1333947 . - . ID=gene-PUW38_06460;Name=PUW38_06460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06460;pseudo=true CP118116.1 Protein Homology CDS 1331315 1333947 . - 0 ID=cds-PUW38_06460;Parent=gene-PUW38_06460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=PUW38_06460;product=MlaD family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1333916 1335199 . - . ID=gene-PUW38_06465;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=PUW38_06465 CP118116.1 Protein Homology CDS 1333916 1335199 . - 0 ID=cds-WJG82322.1;Parent=gene-PUW38_06465;Dbxref=NCBI_GP:WJG82322.1;Name=WJG82322.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=PUW38_06465;product=membrane integrity lipid transport subunit YebS;protein_id=WJG82322.1;transl_table=11 CP118116.1 Genbank gene 1335328 1335825 . + . ID=gene-PUW38_06470;Name=PUW38_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06470 CP118116.1 Protein Homology CDS 1335328 1335825 . + 0 ID=cds-WJG82323.1;Parent=gene-PUW38_06470;Dbxref=NCBI_GP:WJG82323.1;Name=WJG82323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=PUW38_06470;product=GAF domain-containing protein;protein_id=WJG82323.1;transl_table=11 CP118116.1 Genbank gene 1335923 1336609 . + . ID=gene-PUW38_06475;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=PUW38_06475 CP118116.1 Protein Homology CDS 1335923 1336609 . + 0 ID=cds-WJG82324.1;Parent=gene-PUW38_06475;Dbxref=NCBI_GP:WJG82324.1;Name=WJG82324.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=PUW38_06475;product=RNA chaperone ProQ;protein_id=WJG82324.1;transl_table=11 CP118116.1 Genbank pseudogene 1336629 1338676 . + . ID=gene-PUW38_06480;Name=prc;gbkey=Gene;gene=prc;gene_biotype=pseudogene;locus_tag=PUW38_06480;pseudo=true CP118116.1 Protein Homology CDS 1336629 1338676 . + 0 ID=cds-PUW38_06480;Parent=gene-PUW38_06480;Note=frameshifted;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=PUW38_06480;product=carboxy terminal-processing peptidase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1338869 1339750 . + . ID=gene-PUW38_06485;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=PUW38_06485 CP118116.1 Protein Homology CDS 1338869 1339750 . + 0 ID=cds-WJG82325.1;Parent=gene-PUW38_06485;Dbxref=NCBI_GP:WJG82325.1;Name=WJG82325.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=PUW38_06485;product=protease HtpX;protein_id=WJG82325.1;transl_table=11 CP118116.1 Genbank pseudogene 1339798 1341049 . - . ID=gene-PUW38_06490;Name=PUW38_06490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06490;pseudo=true CP118116.1 Protein Homology CDS 1339798 1341049 . - 0 ID=cds-PUW38_06490;Parent=gene-PUW38_06490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=PUW38_06490;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1341225 1342015 . + . ID=gene-PUW38_06495;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=pseudogene;locus_tag=PUW38_06495;pseudo=true CP118116.1 Protein Homology CDS 1341225 1342015 . + 0 ID=cds-PUW38_06495;Parent=gene-PUW38_06495;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=PUW38_06495;product=DNA-binding transcriptional regulator KdgR;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1342227 1342466 . - . ID=gene-PUW38_06500;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=PUW38_06500 CP118116.1 Protein Homology CDS 1342227 1342466 . - 0 ID=cds-WJG82326.1;Parent=gene-PUW38_06500;Dbxref=NCBI_GP:WJG82326.1;Name=WJG82326.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=PUW38_06500;product=invasion protein YobH;protein_id=WJG82326.1;transl_table=11 CP118116.1 Genbank gene 1342624 1342767 . + . ID=gene-PUW38_06505;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=PUW38_06505 CP118116.1 Protein Homology CDS 1342624 1342767 . + 0 ID=cds-WJG82327.1;Parent=gene-PUW38_06505;Dbxref=NCBI_GP:WJG82327.1;Name=WJG82327.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=PUW38_06505;product=PhoP/PhoQ regulator MgrB;protein_id=WJG82327.1;transl_table=11 CP118116.1 Genbank gene 1342838 1343125 . + . ID=gene-PUW38_06510;Name=PUW38_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06510 CP118116.1 Protein Homology CDS 1342838 1343125 . + 0 ID=cds-WJG82328.1;Parent=gene-PUW38_06510;Dbxref=NCBI_GP:WJG82328.1;Name=WJG82328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=PUW38_06510;product=YebO family protein;protein_id=WJG82328.1;transl_table=11 CP118116.1 Genbank gene 1343773 1343916 . + . ID=gene-PUW38_06515;Name=PUW38_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06515 CP118116.1 Protein Homology CDS 1343773 1343916 . + 0 ID=cds-WJG82329.1;Parent=gene-PUW38_06515;Dbxref=NCBI_GP:WJG82329.1;Name=WJG82329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=PUW38_06515;product=DUF2627 domain-containing protein;protein_id=WJG82329.1;transl_table=11 CP118116.1 Genbank gene 1343929 1344138 . + . ID=gene-PUW38_06520;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PUW38_06520 CP118116.1 Protein Homology CDS 1343929 1344138 . + 0 ID=cds-WJG82330.1;Parent=gene-PUW38_06520;Dbxref=NCBI_GP:WJG82330.1;Name=WJG82330.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=PUW38_06520;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WJG82330.1;transl_table=11 CP118116.1 Genbank pseudogene 1344553 1346102 . + . ID=gene-PUW38_06525;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=pseudogene;locus_tag=PUW38_06525;pseudo=true CP118116.1 Protein Homology CDS 1344553 1346102 . + 0 ID=cds-PUW38_06525;Parent=gene-PUW38_06525;Note=frameshifted;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF013100.2;locus_tag=PUW38_06525;product=peptidoglycan glycosyltransferase FtsI;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1346168 1346976 . + . ID=gene-PUW38_06530;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=pseudogene;locus_tag=PUW38_06530;pseudo=true CP118116.1 Protein Homology CDS 1346168 1346976 . + 0 ID=cds-PUW38_06530;Parent=gene-PUW38_06530;Note=frameshifted;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=PUW38_06530;product=23S rRNA (guanine(745)-N(1))-methyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1346973 1347539 . - . ID=gene-PUW38_06535;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=PUW38_06535 CP118116.1 Protein Homology CDS 1346973 1347539 . - 0 ID=cds-WJG82331.1;Parent=gene-PUW38_06535;Dbxref=NCBI_GP:WJG82331.1;Name=WJG82331.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=PUW38_06535;product=manganese efflux pump MntP;protein_id=WJG82331.1;transl_table=11 CP118116.1 cmsearch riboswitch 1347651 1347752 . - . ID=id-CP118116.1:1347651..1347752;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118116.1 Genbank pseudogene 1347949 1348407 . - . ID=gene-PUW38_06540;Name=PUW38_06540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06540;pseudo=true CP118116.1 Protein Homology CDS 1347949 1348407 . - 0 ID=cds-PUW38_06540;Parent=gene-PUW38_06540;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=PUW38_06540;product=DUF986 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1348466 1349317 . - . ID=gene-PUW38_06545;Name=PUW38_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06545 CP118116.1 Protein Homology CDS 1348466 1349317 . - 0 ID=cds-WJG82332.1;Parent=gene-PUW38_06545;Dbxref=NCBI_GP:WJG82332.1;Name=WJG82332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=PUW38_06545;product=PTS mannose transporter subunit IID;protein_id=WJG82332.1;transl_table=11 CP118116.1 Genbank gene 1349330 1350130 . - . ID=gene-PUW38_06550;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=PUW38_06550 CP118116.1 Protein Homology CDS 1349330 1350130 . - 0 ID=cds-WJG82333.1;Parent=gene-PUW38_06550;Dbxref=NCBI_GP:WJG82333.1;Name=WJG82333.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=PUW38_06550;product=PTS mannose transporter subunit IIC;protein_id=WJG82333.1;transl_table=11 CP118116.1 Genbank gene 1350183 1351151 . - . ID=gene-PUW38_06555;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=PUW38_06555 CP118116.1 Protein Homology CDS 1350183 1351151 . - 0 ID=cds-WJG82334.1;Parent=gene-PUW38_06555;Dbxref=NCBI_GP:WJG82334.1;Name=WJG82334.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=PUW38_06555;product=PTS mannose transporter subunit IIAB;protein_id=WJG82334.1;transl_table=11 CP118116.1 Genbank gene 1351623 1353182 . + . ID=gene-PUW38_06560;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=PUW38_06560 CP118116.1 Protein Homology CDS 1351623 1353182 . + 0 ID=cds-WJG82335.1;Parent=gene-PUW38_06560;Dbxref=NCBI_GP:WJG82335.1;Name=WJG82335.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=PUW38_06560;product=CNNM family cation transport protein YoaE;protein_id=WJG82335.1;transl_table=11 CP118116.1 Genbank gene 1353204 1354805 . - . ID=gene-PUW38_06565;Name=PUW38_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06565 CP118116.1 Protein Homology CDS 1353204 1354805 . - 0 ID=cds-WJG82336.1;Parent=gene-PUW38_06565;Dbxref=NCBI_GP:WJG82336.1;Name=WJG82336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=PUW38_06565;product=cyclic diguanylate phosphodiesterase;protein_id=WJG82336.1;transl_table=11 CP118116.1 Genbank gene 1354943 1356307 . - . ID=gene-PUW38_06570;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=PUW38_06570 CP118116.1 Protein Homology CDS 1354943 1356307 . - 0 ID=cds-WJG82337.1;Parent=gene-PUW38_06570;Dbxref=NCBI_GP:WJG82337.1;Name=WJG82337.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=PUW38_06570;product=L-serine ammonia-lyase;protein_id=WJG82337.1;transl_table=11 CP118116.1 Genbank gene 1356571 1357149 . - . ID=gene-PUW38_06575;Name=PUW38_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06575 CP118116.1 Protein Homology CDS 1356571 1357149 . - 0 ID=cds-WJG82338.1;Parent=gene-PUW38_06575;Dbxref=NCBI_GP:WJG82338.1;Name=WJG82338.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=PUW38_06575;product=CoA pyrophosphatase;protein_id=WJG82338.1;transl_table=11 CP118116.1 Genbank gene 1357153 1358517 . - . ID=gene-PUW38_06580;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=PUW38_06580 CP118116.1 Protein Homology CDS 1357153 1358517 . - 0 ID=cds-WJG82339.1;Parent=gene-PUW38_06580;Dbxref=NCBI_GP:WJG82339.1;Name=WJG82339.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=PUW38_06580;product=aminodeoxychorismate synthase component 1;protein_id=WJG82339.1;transl_table=11 CP118116.1 Genbank gene 1358598 1358777 . + . ID=gene-PUW38_06585;Name=PUW38_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06585 CP118116.1 Protein Homology CDS 1358598 1358777 . + 0 ID=cds-WJG82340.1;Parent=gene-PUW38_06585;Dbxref=NCBI_GP:WJG82340.1;Name=WJG82340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=PUW38_06585;product=YoaH family protein;protein_id=WJG82340.1;transl_table=11 CP118116.1 Genbank gene 1358783 1359127 . - . ID=gene-PUW38_06590;Name=PUW38_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06590 CP118116.1 Protein Homology CDS 1358783 1359127 . - 0 ID=cds-WJG82341.1;Parent=gene-PUW38_06590;Dbxref=NCBI_GP:WJG82341.1;Name=WJG82341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=PUW38_06590;product=RidA family protein;protein_id=WJG82341.1;transl_table=11 CP118116.1 Genbank pseudogene 1359258 1361167 . + . ID=gene-PUW38_06595;Name=PUW38_06595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06595;pseudo=true CP118116.1 Protein Homology CDS 1359258 1361167 . + 0 ID=cds-PUW38_06595;Parent=gene-PUW38_06595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=PUW38_06595;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1361225 1361920 . + . ID=gene-PUW38_06600;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=PUW38_06600 CP118116.1 Protein Homology CDS 1361225 1361920 . + 0 ID=cds-WJG82342.1;Parent=gene-PUW38_06600;Dbxref=NCBI_GP:WJG82342.1;Name=WJG82342.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=PUW38_06600;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WJG82342.1;transl_table=11 CP118116.1 Genbank gene 1361992 1362573 . + . ID=gene-PUW38_06605;Name=PUW38_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06605 CP118116.1 Protein Homology CDS 1361992 1362573 . + 0 ID=cds-WJG82343.1;Parent=gene-PUW38_06605;Dbxref=NCBI_GP:WJG82343.1;Name=WJG82343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=PUW38_06605;product=Slp family lipoprotein;protein_id=WJG82343.1;transl_table=11 CP118116.1 Genbank gene 1362778 1364463 . + . ID=gene-PUW38_06610;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=PUW38_06610 CP118116.1 Protein Homology CDS 1362778 1364463 . + 0 ID=cds-WJG82344.1;Parent=gene-PUW38_06610;Dbxref=NCBI_GP:WJG82344.1;Name=WJG82344.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=PUW38_06610;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WJG82344.1;transl_table=11 CP118116.1 Genbank gene 1364536 1365663 . + . ID=gene-PUW38_06615;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=PUW38_06615 CP118116.1 Protein Homology CDS 1364536 1365663 . + 0 ID=cds-WJG82345.1;Parent=gene-PUW38_06615;Dbxref=NCBI_GP:WJG82345.1;Name=WJG82345.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=PUW38_06615;product=ribonuclease D;protein_id=WJG82345.1;transl_table=11 CP118116.1 Genbank gene 1365785 1366051 . - . ID=gene-PUW38_06620;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=PUW38_06620 CP118116.1 Protein Homology CDS 1365785 1366051 . - 0 ID=cds-WJG82346.1;Parent=gene-PUW38_06620;Dbxref=NCBI_GP:WJG82346.1;Name=WJG82346.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=PUW38_06620;product=cell division topological specificity factor MinE;protein_id=WJG82346.1;transl_table=11 CP118116.1 Genbank gene 1366055 1366867 . - . ID=gene-PUW38_06625;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=PUW38_06625 CP118116.1 Protein Homology CDS 1366055 1366867 . - 0 ID=cds-WJG82347.1;Parent=gene-PUW38_06625;Dbxref=NCBI_GP:WJG82347.1;Name=WJG82347.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=PUW38_06625;product=septum site-determining protein MinD;protein_id=WJG82347.1;transl_table=11 CP118116.1 Genbank gene 1366891 1367598 . - . ID=gene-PUW38_06630;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=PUW38_06630 CP118116.1 Protein Homology CDS 1366891 1367598 . - 0 ID=cds-WJG82348.1;Parent=gene-PUW38_06630;Dbxref=NCBI_GP:WJG82348.1;Name=WJG82348.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=PUW38_06630;product=septum site-determining protein MinC;protein_id=WJG82348.1;transl_table=11 CP118116.1 Genbank gene 1367724 1368017 . + . ID=gene-PUW38_06635;Name=PUW38_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06635 CP118116.1 Protein Homology CDS 1367724 1368017 . + 0 ID=cds-WJG82349.1;Parent=gene-PUW38_06635;Dbxref=NCBI_GP:WJG82349.1;Name=WJG82349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667868.1;locus_tag=PUW38_06635;product=YcgL domain-containing protein;protein_id=WJG82349.1;transl_table=11 CP118116.1 Genbank pseudogene 1368067 1368725 . + . ID=gene-PUW38_06640;Name=PUW38_06640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06640;pseudo=true CP118116.1 Protein Homology CDS 1368067 1368725 . + 0 ID=cds-PUW38_06640;Parent=gene-PUW38_06640;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=PUW38_06640;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1368818 1369264 . + . ID=gene-PUW38_06645;Name=PUW38_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06645 CP118116.1 Protein Homology CDS 1368818 1369264 . + 0 ID=cds-WJG82350.1;Parent=gene-PUW38_06645;Dbxref=NCBI_GP:WJG82350.1;Name=WJG82350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=PUW38_06645;product=YcgN family cysteine cluster protein;protein_id=WJG82350.1;transl_table=11 CP118116.1 Genbank gene 1369616 1369753 . + . ID=gene-PUW38_06650;Name=PUW38_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06650 CP118116.1 Protein Homology CDS 1369616 1369753 . + 0 ID=cds-WJG82351.1;Parent=gene-PUW38_06650;Dbxref=NCBI_GP:WJG82351.1;Name=WJG82351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=PUW38_06650;product=hypothetical protein;protein_id=WJG82351.1;transl_table=11 CP118116.1 Genbank gene 1369945 1370118 . + . ID=gene-PUW38_06655;Name=PUW38_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06655 CP118116.1 Protein Homology CDS 1369945 1370118 . + 0 ID=cds-WJG82352.1;Parent=gene-PUW38_06655;Dbxref=NCBI_GP:WJG82352.1;Name=WJG82352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=PUW38_06655;product=addiction module toxin%2C GnsA/GnsB family;protein_id=WJG82352.1;transl_table=11 CP118116.1 Genbank gene 1370190 1370531 . - . ID=gene-PUW38_06660;Name=PUW38_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06660 CP118116.1 Protein Homology CDS 1370190 1370531 . - 0 ID=cds-WJG82353.1;Parent=gene-PUW38_06660;Dbxref=NCBI_GP:WJG82353.1;Name=WJG82353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=PUW38_06660;product=DUF1971 domain-containing protein;protein_id=WJG82353.1;transl_table=11 CP118116.1 Genbank gene 1370640 1371170 . - . ID=gene-PUW38_06665;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=PUW38_06665 CP118116.1 Protein Homology CDS 1370640 1371170 . - 0 ID=cds-WJG82354.1;Parent=gene-PUW38_06665;Dbxref=NCBI_GP:WJG82354.1;Name=WJG82354.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=PUW38_06665;product=disulfide bond formation protein DsbB;protein_id=WJG82354.1;transl_table=11 CP118116.1 Genbank gene 1371312 1372856 . - . ID=gene-PUW38_06670;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=PUW38_06670 CP118116.1 Protein Homology CDS 1371312 1372856 . - 0 ID=cds-WJG82355.1;Parent=gene-PUW38_06670;Dbxref=NCBI_GP:WJG82355.1;Name=WJG82355.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaB;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=PUW38_06670;product=Na(+)/H(+) antiporter NhaB;protein_id=WJG82355.1;transl_table=11 CP118116.1 Genbank gene 1373076 1373795 . + . ID=gene-PUW38_06675;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=PUW38_06675 CP118116.1 Protein Homology CDS 1373076 1373795 . + 0 ID=cds-WJG82356.1;Parent=gene-PUW38_06675;Dbxref=NCBI_GP:WJG82356.1;Name=WJG82356.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=PUW38_06675;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WJG82356.1;transl_table=11 CP118116.1 Genbank gene 1373842 1375374 . - . ID=gene-PUW38_06680;Name=PUW38_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06680 CP118116.1 Protein Homology CDS 1373842 1375374 . - 0 ID=cds-WJG82357.1;Parent=gene-PUW38_06680;Dbxref=NCBI_GP:WJG82357.1;Name=WJG82357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=PUW38_06680;product=SpoVR family protein;protein_id=WJG82357.1;transl_table=11 CP118116.1 Genbank pseudogene 1375697 1376994 . + . ID=gene-PUW38_06685;Name=PUW38_06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06685;pseudo=true CP118116.1 Protein Homology CDS 1375697 1376994 . + 0 ID=cds-PUW38_06685;Parent=gene-PUW38_06685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=PUW38_06685;product=D-amino acid dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1377008 1378078 . + . ID=gene-PUW38_06690;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=PUW38_06690 CP118116.1 Protein Homology CDS 1377008 1378078 . + 0 ID=cds-WJG82358.1;Parent=gene-PUW38_06690;Dbxref=NCBI_GP:WJG82358.1;Name=WJG82358.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=PUW38_06690;product=catabolic alanine racemase DadX;protein_id=WJG82358.1;transl_table=11 CP118116.1 Genbank gene 1378141 1379874 . - . ID=gene-PUW38_06695;Name=PUW38_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06695 CP118116.1 Protein Homology CDS 1378141 1379874 . - 0 ID=cds-WJG82359.1;Parent=gene-PUW38_06695;Dbxref=NCBI_GP:WJG82359.1;Name=WJG82359.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=PUW38_06695;product=potassium/proton antiporter;protein_id=WJG82359.1;transl_table=11 CP118116.1 Genbank gene 1379971 1380885 . - . ID=gene-PUW38_06700;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=PUW38_06700 CP118116.1 Protein Homology CDS 1379971 1380885 . - 0 ID=cds-WJG82360.1;Parent=gene-PUW38_06700;Dbxref=NCBI_GP:WJG82360.1;Name=WJG82360.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=PUW38_06700;product=muramoyltetrapeptide carboxypeptidase;protein_id=WJG82360.1;transl_table=11 CP118116.1 Genbank pseudogene 1381056 1381666 . + . ID=gene-PUW38_06705;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=pseudogene;locus_tag=PUW38_06705;pseudo=true CP118116.1 Protein Homology CDS 1381056 1381666 . + 0 ID=cds-PUW38_06705;Parent=gene-PUW38_06705;Note=frameshifted;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=PUW38_06705;product=membrane-bound lytic murein transglycosylase EmtA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1381680 1382414 . - . ID=gene-PUW38_06710;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=PUW38_06710 CP118116.1 Protein Homology CDS 1381680 1382414 . - 0 ID=cds-WJG82361.1;Parent=gene-PUW38_06710;Dbxref=NCBI_GP:WJG82361.1;Name=WJG82361.1;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=PUW38_06710;product=flagellar brake protein YcgR;protein_id=WJG82361.1;transl_table=11 CP118116.1 Genbank gene 1382583 1382837 . + . ID=gene-PUW38_06715;Name=PUW38_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06715 CP118116.1 Protein Homology CDS 1382583 1382837 . + 0 ID=cds-WJG82362.1;Parent=gene-PUW38_06715;Dbxref=NCBI_GP:WJG82362.1;Name=WJG82362.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=PUW38_06715;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WJG82362.1;transl_table=11 CP118116.1 Genbank gene 1382900 1384612 . - . ID=gene-PUW38_06720;Name=PUW38_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06720 CP118116.1 Protein Homology CDS 1382900 1384612 . - 0 ID=cds-WJG83187.1;Parent=gene-PUW38_06720;Dbxref=NCBI_GP:WJG83187.1;Name=WJG83187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=PUW38_06720;product=alpha%2Calpha-trehalase;protein_id=WJG83187.1;transl_table=11 CP118116.1 Genbank gene 1384826 1386100 . - . ID=gene-PUW38_06725;Name=PUW38_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06725 CP118116.1 Protein Homology CDS 1384826 1386100 . - 0 ID=cds-WJG82363.1;Parent=gene-PUW38_06725;Dbxref=NCBI_GP:WJG82363.1;Name=WJG82363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=PUW38_06725;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WJG82363.1;transl_table=11 CP118116.1 Genbank gene 1386495 1386584 . - . ID=gene-PUW38_06730;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=PUW38_06730 CP118116.1 Protein Homology CDS 1386495 1386584 . - 0 ID=cds-WJG82364.1;Parent=gene-PUW38_06730;Dbxref=NCBI_GP:WJG82364.1;Name=WJG82364.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=PUW38_06730;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WJG82364.1;transl_table=11 CP118116.1 Genbank gene 1386597 1387733 . - . ID=gene-PUW38_06735;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=PUW38_06735 CP118116.1 Protein Homology CDS 1386597 1387733 . - 0 ID=cds-WJG82365.1;Parent=gene-PUW38_06735;Dbxref=NCBI_GP:WJG82365.1;Name=WJG82365.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=PUW38_06735;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WJG82365.1;transl_table=11 CP118116.1 Genbank gene 1387745 1389289 . - . ID=gene-PUW38_06740;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=PUW38_06740 CP118116.1 Protein Homology CDS 1387745 1389289 . - 0 ID=cds-WJG82366.1;Parent=gene-PUW38_06740;Dbxref=NCBI_GP:WJG82366.1;Name=WJG82366.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=PUW38_06740;product=cytochrome bd-II oxidase subunit 1;protein_id=WJG82366.1;transl_table=11 CP118116.1 Genbank pseudogene 1389364 1390212 . - . ID=gene-PUW38_06745;Name=PUW38_06745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06745;pseudo=true CP118116.1 Protein Homology CDS 1389364 1390212 . - 0 ID=cds-PUW38_06745;Parent=gene-PUW38_06745;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=PUW38_06745;product=hydrogenase expression/formation protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1390209 1390613 . - . ID=gene-PUW38_06750;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=PUW38_06750 CP118116.1 Protein Homology CDS 1390209 1390613 . - 0 ID=cds-WJG82367.1;Parent=gene-PUW38_06750;Dbxref=NCBI_GP:WJG82367.1;Name=WJG82367.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=PUW38_06750;product=hydrogenase-1 operon protein HyaE;protein_id=WJG82367.1;transl_table=11 CP118116.1 Genbank gene 1390603 1391199 . - . ID=gene-PUW38_06755;Name=PUW38_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06755 CP118116.1 Protein Homology CDS 1390603 1391199 . - 0 ID=cds-WJG82368.1;Parent=gene-PUW38_06755;Dbxref=NCBI_GP:WJG82368.1;Name=WJG82368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=PUW38_06755;product=hydrogenase 1 maturation protease;protein_id=WJG82368.1;transl_table=11 CP118116.1 Genbank pseudogene 1391196 1391926 . - . ID=gene-PUW38_06760;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=pseudogene;locus_tag=PUW38_06760;pseudo=true CP118116.1 Protein Homology CDS 1391196 1391926 . - 0 ID=cds-PUW38_06760;Parent=gene-PUW38_06760;Note=frameshifted;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=PUW38_06760;product=Ni/Fe-hydrogenase b-type cytochrome subunit;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1391945 1393738 . - . ID=gene-PUW38_06765;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=PUW38_06765 CP118116.1 Protein Homology CDS 1391945 1393738 . - 0 ID=cds-WJG82369.1;Parent=gene-PUW38_06765;Dbxref=NCBI_GP:WJG82369.1;Name=WJG82369.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=PUW38_06765;product=Ni/Fe-hydrogenase large subunit;protein_id=WJG82369.1;transl_table=11 CP118116.1 Genbank gene 1393735 1394853 . - . ID=gene-PUW38_06770;Name=PUW38_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06770 CP118116.1 Protein Homology CDS 1393735 1394853 . - 0 ID=cds-WJG82370.1;Parent=gene-PUW38_06770;Dbxref=NCBI_GP:WJG82370.1;Name=WJG82370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=PUW38_06770;product=hydrogenase 1 small subunit;protein_id=WJG82370.1;transl_table=11 CP118116.1 Genbank gene 1395768 1396220 . - . ID=gene-PUW38_06775;Name=PUW38_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06775 CP118116.1 Protein Homology CDS 1395768 1396220 . - 0 ID=cds-WJG82371.1;Parent=gene-PUW38_06775;Dbxref=NCBI_GP:WJG82371.1;Name=WJG82371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=PUW38_06775;product=hypothetical protein;protein_id=WJG82371.1;transl_table=11 CP118116.1 Genbank gene 1396259 1396879 . - . ID=gene-PUW38_06780;Name=PUW38_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06780 CP118116.1 Protein Homology CDS 1396259 1396879 . - 0 ID=cds-WJG82372.1;Parent=gene-PUW38_06780;Dbxref=NCBI_GP:WJG82372.1;Name=WJG82372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=PUW38_06780;product=hypothetical protein;protein_id=WJG82372.1;transl_table=11 CP118116.1 Genbank gene 1397638 1398729 . - . ID=gene-PUW38_06785;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=PUW38_06785 CP118116.1 Protein Homology CDS 1397638 1398729 . - 0 ID=cds-WJG82373.1;Parent=gene-PUW38_06785;Dbxref=NCBI_GP:WJG82373.1;Name=WJG82373.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=PUW38_06785;product=redox-regulated ATPase YchF;protein_id=WJG82373.1;transl_table=11 CP118116.1 Genbank gene 1398846 1399430 . - . ID=gene-PUW38_06790;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=PUW38_06790 CP118116.1 Protein Homology CDS 1398846 1399430 . - 0 ID=cds-WJG82374.1;Parent=gene-PUW38_06790;Dbxref=NCBI_GP:WJG82374.1;Name=WJG82374.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=PUW38_06790;product=aminoacyl-tRNA hydrolase;protein_id=WJG82374.1;transl_table=11 CP118116.1 Genbank gene 1399706 1399984 . + . ID=gene-PUW38_06795;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=PUW38_06795 CP118116.1 Protein Homology CDS 1399706 1399984 . + 0 ID=cds-WJG82375.1;Parent=gene-PUW38_06795;Dbxref=NCBI_GP:WJG82375.1;Name=WJG82375.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=PUW38_06795;product=stress-induced protein YchH;protein_id=WJG82375.1;transl_table=11 CP118116.1 Genbank gene 1400029 1401714 . - . ID=gene-PUW38_06800;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=PUW38_06800 CP118116.1 Protein Homology CDS 1400029 1401714 . - 0 ID=cds-WJG82376.1;Parent=gene-PUW38_06800;Dbxref=NCBI_GP:WJG82376.1;Name=WJG82376.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=PUW38_06800;product=C4-dicarboxylic acid transporter DauA;protein_id=WJG82376.1;transl_table=11 CP118116.1 Genbank gene 1401839 1402786 . - . ID=gene-PUW38_06805;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=PUW38_06805 CP118116.1 Protein Homology CDS 1401839 1402786 . - 0 ID=cds-WJG82377.1;Parent=gene-PUW38_06805;Dbxref=NCBI_GP:WJG82377.1;Name=WJG82377.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=PUW38_06805;product=ribose-phosphate diphosphokinase;protein_id=WJG82377.1;transl_table=11 CP118116.1 Genbank gene 1403052 1403903 . - . ID=gene-PUW38_06810;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=PUW38_06810 CP118116.1 Protein Homology CDS 1403052 1403903 . - 0 ID=cds-WJG82378.1;Parent=gene-PUW38_06810;Dbxref=NCBI_GP:WJG82378.1;Name=WJG82378.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=PUW38_06810;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WJG82378.1;transl_table=11 CP118116.1 Genbank gene 1403900 1404523 . - . ID=gene-PUW38_06815;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=PUW38_06815 CP118116.1 Protein Homology CDS 1403900 1404523 . - 0 ID=cds-WJG82379.1;Parent=gene-PUW38_06815;Dbxref=NCBI_GP:WJG82379.1;Name=WJG82379.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=PUW38_06815;product=lipoprotein insertase outer membrane protein LolB;protein_id=WJG82379.1;transl_table=11 CP118116.1 Genbank gene 1404837 1406093 . + . ID=gene-PUW38_06820;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=PUW38_06820 CP118116.1 Protein Homology CDS 1404837 1406093 . + 0 ID=cds-WJG82380.1;Parent=gene-PUW38_06820;Dbxref=NCBI_GP:WJG82380.1;Name=WJG82380.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=PUW38_06820;product=glutamyl-tRNA reductase;protein_id=WJG82380.1;transl_table=11 CP118116.1 Genbank gene 1406134 1407216 . + . ID=gene-PUW38_06825;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=PUW38_06825 CP118116.1 Protein Homology CDS 1406134 1407216 . + 0 ID=cds-WJG82381.1;Parent=gene-PUW38_06825;Dbxref=NCBI_GP:WJG82381.1;Name=WJG82381.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=PUW38_06825;product=peptide chain release factor 1;protein_id=WJG82381.1;transl_table=11 CP118116.1 Genbank gene 1407216 1408049 . + . ID=gene-PUW38_06830;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=PUW38_06830 CP118116.1 Protein Homology CDS 1407216 1408049 . + 0 ID=cds-WJG82382.1;Parent=gene-PUW38_06830;Dbxref=NCBI_GP:WJG82382.1;Name=WJG82382.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=PUW38_06830;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WJG82382.1;transl_table=11 CP118116.1 Genbank gene 1408046 1408435 . + . ID=gene-PUW38_06835;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=PUW38_06835 CP118116.1 Protein Homology CDS 1408046 1408435 . + 0 ID=cds-WJG82383.1;Parent=gene-PUW38_06835;Dbxref=NCBI_GP:WJG82383.1;Name=WJG82383.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=PUW38_06835;product=invasion regulator SirB2;protein_id=WJG82383.1;transl_table=11 CP118116.1 Genbank gene 1408439 1409248 . + . ID=gene-PUW38_06840;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=PUW38_06840 CP118116.1 Protein Homology CDS 1408439 1409248 . + 0 ID=cds-WJG82384.1;Parent=gene-PUW38_06840;Dbxref=NCBI_GP:WJG82384.1;Name=WJG82384.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=PUW38_06840;product=invasion regulator SirB1;protein_id=WJG82384.1;transl_table=11 CP118116.1 Genbank gene 1409286 1410140 . + . ID=gene-PUW38_06845;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=PUW38_06845 CP118116.1 Protein Homology CDS 1409286 1410140 . + 0 ID=cds-WJG82385.1;Parent=gene-PUW38_06845;Dbxref=NCBI_GP:WJG82385.1;Name=WJG82385.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=PUW38_06845;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WJG82385.1;transl_table=11 CP118116.1 Genbank gene 1410194 1411294 . - . ID=gene-PUW38_06850;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=PUW38_06850 CP118116.1 Protein Homology CDS 1410194 1411294 . - 0 ID=cds-WJG82386.1;Parent=gene-PUW38_06850;Dbxref=NCBI_GP:WJG82386.1;Name=WJG82386.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=PUW38_06850;product=sodium-potassium/proton antiporter ChaA;protein_id=WJG82386.1;transl_table=11 CP118116.1 Genbank gene 1411561 1411791 . + . ID=gene-PUW38_06855;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=PUW38_06855 CP118116.1 Protein Homology CDS 1411561 1411791 . + 0 ID=cds-WJG82387.1;Parent=gene-PUW38_06855;Dbxref=NCBI_GP:WJG82387.1;Name=WJG82387.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=PUW38_06855;product=putative cation transport regulator ChaB;protein_id=WJG82387.1;transl_table=11 CP118116.1 Genbank gene 1411871 1412224 . - . ID=gene-PUW38_06860;Name=PUW38_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06860 CP118116.1 Protein Homology CDS 1411871 1412224 . - 0 ID=cds-WJG82388.1;Parent=gene-PUW38_06860;Dbxref=NCBI_GP:WJG82388.1;Name=WJG82388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=PUW38_06860;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WJG82388.1;transl_table=11 CP118116.1 Genbank gene 1412401 1413825 . + . ID=gene-PUW38_06865;Name=PUW38_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06865 CP118116.1 Protein Homology CDS 1412401 1413825 . + 0 ID=cds-WJG82389.1;Parent=gene-PUW38_06865;Dbxref=NCBI_GP:WJG82389.1;Name=WJG82389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=PUW38_06865;product=YchO/YchP family invasin;protein_id=WJG82389.1;transl_table=11 CP118116.1 Genbank gene 1413826 1414476 . - . ID=gene-PUW38_06870;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=PUW38_06870 CP118116.1 Protein Homology CDS 1413826 1414476 . - 0 ID=cds-WJG82390.1;Parent=gene-PUW38_06870;Dbxref=NCBI_GP:WJG82390.1;Name=WJG82390.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=PUW38_06870;product=two-component system response regulator NarL;protein_id=WJG82390.1;transl_table=11 CP118116.1 Genbank pseudogene 1414469 1416264 . - . ID=gene-PUW38_06875;Name=narX;gbkey=Gene;gene=narX;gene_biotype=pseudogene;locus_tag=PUW38_06875;pseudo=true CP118116.1 Protein Homology CDS 1414469 1416264 . - 0 ID=cds-PUW38_06875;Parent=gene-PUW38_06875;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=PUW38_06875;product=nitrate/nitrite two-component system sensor histidine kinase NarX;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1416605 1418002 . + . ID=gene-PUW38_06880;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=PUW38_06880 CP118116.1 Protein Homology CDS 1416605 1418002 . + 0 ID=cds-WJG82391.1;Parent=gene-PUW38_06880;Dbxref=NCBI_GP:WJG82391.1;Name=WJG82391.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=PUW38_06880;product=nitrate transporter NarK;protein_id=WJG82391.1;transl_table=11 CP118116.1 Genbank gene 1418389 1422132 . + . ID=gene-PUW38_06885;Name=PUW38_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06885 CP118116.1 Protein Homology CDS 1418389 1422132 . + 0 ID=cds-WJG82392.1;Parent=gene-PUW38_06885;Dbxref=NCBI_GP:WJG82392.1;Name=WJG82392.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=PUW38_06885;product=nitrate reductase subunit alpha;protein_id=WJG82392.1;transl_table=11 CP118116.1 Genbank gene 1422129 1423667 . + . ID=gene-PUW38_06890;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PUW38_06890 CP118116.1 Protein Homology CDS 1422129 1423667 . + 0 ID=cds-WJG82393.1;Parent=gene-PUW38_06890;Dbxref=NCBI_GP:WJG82393.1;Name=WJG82393.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=PUW38_06890;product=nitrate reductase subunit beta;protein_id=WJG82393.1;transl_table=11 CP118116.1 Genbank gene 1423664 1424374 . + . ID=gene-PUW38_06895;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=PUW38_06895 CP118116.1 Protein Homology CDS 1423664 1424374 . + 0 ID=cds-WJG82394.1;Parent=gene-PUW38_06895;Dbxref=NCBI_GP:WJG82394.1;Name=WJG82394.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=PUW38_06895;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WJG82394.1;transl_table=11 CP118116.1 Genbank gene 1424374 1425051 . + . ID=gene-PUW38_06900;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PUW38_06900 CP118116.1 Protein Homology CDS 1424374 1425051 . + 0 ID=cds-WJG82395.1;Parent=gene-PUW38_06900;Dbxref=NCBI_GP:WJG82395.1;Name=WJG82395.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=PUW38_06900;product=respiratory nitrate reductase subunit gamma;protein_id=WJG82395.1;transl_table=11 CP118116.1 Genbank pseudogene 1425293 1426820 . + . ID=gene-PUW38_06905;Name=PUW38_06905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_06905;pseudo=true CP118116.1 Protein Homology CDS 1425293 1426820 . + 0 ID=cds-PUW38_06905;Parent=gene-PUW38_06905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=PUW38_06905;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1426923 1427054 . - . ID=gene-PUW38_06910;Name=PUW38_06910;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW38_06910 CP118116.1 cmsearch ncRNA 1426923 1427054 . - . ID=rna-PUW38_06910;Parent=gene-PUW38_06910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06910;product=RtT sRNA CP118116.1 cmsearch exon 1426923 1427054 . - . ID=exon-PUW38_06910-1;Parent=rna-PUW38_06910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06910;product=RtT sRNA CP118116.1 Genbank gene 1427098 1427228 . - . ID=gene-PUW38_06915;Name=PUW38_06915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW38_06915 CP118116.1 cmsearch ncRNA 1427098 1427228 . - . ID=rna-PUW38_06915;Parent=gene-PUW38_06915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06915;product=RtT sRNA CP118116.1 cmsearch exon 1427098 1427228 . - . ID=exon-PUW38_06915-1;Parent=rna-PUW38_06915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06915;product=RtT sRNA CP118116.1 Genbank gene 1427272 1427403 . - . ID=gene-PUW38_06920;Name=PUW38_06920;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW38_06920 CP118116.1 cmsearch ncRNA 1427272 1427403 . - . ID=rna-PUW38_06920;Parent=gene-PUW38_06920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06920;product=RtT sRNA CP118116.1 cmsearch exon 1427272 1427403 . - . ID=exon-PUW38_06920-1;Parent=rna-PUW38_06920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06920;product=RtT sRNA CP118116.1 Genbank gene 1427447 1427578 . - . ID=gene-PUW38_06925;Name=PUW38_06925;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW38_06925 CP118116.1 cmsearch ncRNA 1427447 1427578 . - . ID=rna-PUW38_06925;Parent=gene-PUW38_06925;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06925;product=RtT sRNA CP118116.1 cmsearch exon 1427447 1427578 . - . ID=exon-PUW38_06925-1;Parent=rna-PUW38_06925;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06925;product=RtT sRNA CP118116.1 Genbank gene 1427622 1427706 . - . ID=gene-PUW38_06930;Name=PUW38_06930;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_06930 CP118116.1 tRNAscan-SE tRNA 1427622 1427706 . - . ID=rna-PUW38_06930;Parent=gene-PUW38_06930;anticodon=(pos:complement(1427670..1427672));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_06930;product=tRNA-Tyr CP118116.1 tRNAscan-SE exon 1427622 1427706 . - . ID=exon-PUW38_06930-1;Parent=rna-PUW38_06930;anticodon=(pos:complement(1427670..1427672));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_06930;product=tRNA-Tyr CP118116.1 Genbank gene 1427735 1427876 . - . ID=gene-PUW38_06935;Name=PUW38_06935;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW38_06935 CP118116.1 cmsearch ncRNA 1427735 1427876 . - . ID=rna-PUW38_06935;Parent=gene-PUW38_06935;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06935;product=RtT sRNA CP118116.1 cmsearch exon 1427735 1427876 . - . ID=exon-PUW38_06935-1;Parent=rna-PUW38_06935;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_06935;product=RtT sRNA CP118116.1 Genbank gene 1428047 1428889 . - . ID=gene-PUW38_06940;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=PUW38_06940 CP118116.1 Protein Homology CDS 1428047 1428889 . - 0 ID=cds-WJG82396.1;Parent=gene-PUW38_06940;Dbxref=NCBI_GP:WJG82396.1;Name=WJG82396.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=PUW38_06940;product=formyltetrahydrofolate deformylase;protein_id=WJG82396.1;transl_table=11 CP118116.1 Genbank gene 1428940 1429398 . - . ID=gene-PUW38_06945;Name=PUW38_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06945 CP118116.1 Protein Homology CDS 1428940 1429398 . - 0 ID=cds-WJG82397.1;Parent=gene-PUW38_06945;Dbxref=NCBI_GP:WJG82397.1;Name=WJG82397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=PUW38_06945;product=YchJ family protein;protein_id=WJG82397.1;transl_table=11 CP118116.1 Genbank gene 1429509 1430414 . + . ID=gene-PUW38_06950;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=PUW38_06950 CP118116.1 Protein Homology CDS 1429509 1430414 . + 0 ID=cds-WJG82398.1;Parent=gene-PUW38_06950;Dbxref=NCBI_GP:WJG82398.1;Name=WJG82398.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=PUW38_06950;product=patatin-like phospholipase RssA;protein_id=WJG82398.1;transl_table=11 CP118116.1 Genbank gene 1430505 1431518 . + . ID=gene-PUW38_06955;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=PUW38_06955 CP118116.1 Protein Homology CDS 1430505 1431518 . + 0 ID=cds-WJG82399.1;Parent=gene-PUW38_06955;Dbxref=NCBI_GP:WJG82399.1;Name=WJG82399.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=PUW38_06955;product=two-component system response regulator RssB;protein_id=WJG82399.1;transl_table=11 CP118116.1 Genbank gene 1431721 1432629 . + . ID=gene-PUW38_06960;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=PUW38_06960 CP118116.1 Protein Homology CDS 1431721 1432629 . + 0 ID=cds-WJG82400.1;Parent=gene-PUW38_06960;Dbxref=NCBI_GP:WJG82400.1;Name=WJG82400.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=PUW38_06960;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WJG82400.1;transl_table=11 CP118116.1 Genbank gene 1432761 1433174 . - . ID=gene-PUW38_06965;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=PUW38_06965 CP118116.1 Protein Homology CDS 1432761 1433174 . - 0 ID=cds-WJG82401.1;Parent=gene-PUW38_06965;Dbxref=NCBI_GP:WJG82401.1;Name=WJG82401.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=PUW38_06965;product=DNA-binding transcriptional regulator H-NS;protein_id=WJG82401.1;transl_table=11 CP118116.1 Genbank gene 1433837 1434454 . + . ID=gene-PUW38_06970;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=PUW38_06970 CP118116.1 Protein Homology CDS 1433837 1434454 . + 0 ID=cds-WJG82402.1;Parent=gene-PUW38_06970;Dbxref=NCBI_GP:WJG82402.1;Name=WJG82402.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=PUW38_06970;product=thymidine kinase;protein_id=WJG82402.1;transl_table=11 CP118116.1 Genbank pseudogene 1434650 1437327 . - . ID=gene-PUW38_06975;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=pseudogene;gene_synonym=adhC;locus_tag=PUW38_06975;pseudo=true CP118116.1 Protein Homology CDS 1434650 1437327 . - 0 ID=cds-PUW38_06975;Parent=gene-PUW38_06975;Note=frameshifted;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=PUW38_06975;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1437804 1438451 . + . ID=gene-PUW38_06980;Name=PUW38_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_06980 CP118116.1 Protein Homology CDS 1437804 1438451 . + 0 ID=cds-WJG82403.1;Parent=gene-PUW38_06980;Dbxref=NCBI_GP:WJG82403.1;Name=WJG82403.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=PUW38_06980;product=YchE family NAAT transporter;protein_id=WJG82403.1;transl_table=11 CP118116.1 Genbank gene 1439205 1440836 . + . ID=gene-PUW38_06985;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=PUW38_06985 CP118116.1 Protein Homology CDS 1439205 1440836 . + 0 ID=cds-WJG82404.1;Parent=gene-PUW38_06985;Dbxref=NCBI_GP:WJG82404.1;Name=WJG82404.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=PUW38_06985;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WJG82404.1;transl_table=11 CP118116.1 Genbank gene 1440958 1441878 . + . ID=gene-PUW38_06990;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=PUW38_06990 CP118116.1 Protein Homology CDS 1440958 1441878 . + 0 ID=cds-WJG82405.1;Parent=gene-PUW38_06990;Dbxref=NCBI_GP:WJG82405.1;Name=WJG82405.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=PUW38_06990;product=oligopeptide ABC transporter permease OppB;protein_id=WJG82405.1;transl_table=11 CP118116.1 Genbank gene 1441893 1442801 . + . ID=gene-PUW38_06995;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=PUW38_06995 CP118116.1 Protein Homology CDS 1441893 1442801 . + 0 ID=cds-WJG82406.1;Parent=gene-PUW38_06995;Dbxref=NCBI_GP:WJG82406.1;Name=WJG82406.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=PUW38_06995;product=oligopeptide ABC transporter permease OppC;protein_id=WJG82406.1;transl_table=11 CP118116.1 Genbank gene 1442813 1443820 . + . ID=gene-PUW38_07000;Name=PUW38_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07000 CP118116.1 Protein Homology CDS 1442813 1443820 . + 0 ID=cds-WJG82407.1;Parent=gene-PUW38_07000;Dbxref=NCBI_GP:WJG82407.1;Name=WJG82407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=PUW38_07000;product=ABC transporter ATP-binding protein;protein_id=WJG82407.1;transl_table=11 CP118116.1 Genbank gene 1443817 1444821 . + . ID=gene-PUW38_07005;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=PUW38_07005 CP118116.1 Protein Homology CDS 1443817 1444821 . + 0 ID=cds-WJG82408.1;Parent=gene-PUW38_07005;Dbxref=NCBI_GP:WJG82408.1;Name=WJG82408.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=PUW38_07005;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WJG82408.1;transl_table=11 CP118116.1 Genbank gene 1444869 1445705 . + . ID=gene-PUW38_07010;Name=PUW38_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07010 CP118116.1 Protein Homology CDS 1444869 1445705 . + 0 ID=cds-WJG82409.1;Parent=gene-PUW38_07010;Dbxref=NCBI_GP:WJG82409.1;Name=WJG82409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=PUW38_07010;product=ion transporter;protein_id=WJG82409.1;transl_table=11 CP118116.1 Genbank gene 1445753 1446082 . - . ID=gene-PUW38_07015;Name=PUW38_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07015 CP118116.1 Protein Homology CDS 1445753 1446082 . - 0 ID=cds-WJG83188.1;Parent=gene-PUW38_07015;Dbxref=NCBI_GP:WJG83188.1;Name=WJG83188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=PUW38_07015;product=HI1450 family dsDNA-mimic protein;protein_id=WJG83188.1;transl_table=11 CP118116.1 Genbank gene 1446116 1447576 . - . ID=gene-PUW38_07020;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=PUW38_07020 CP118116.1 Protein Homology CDS 1446116 1447576 . - 0 ID=cds-WJG82410.1;Parent=gene-PUW38_07020;Dbxref=NCBI_GP:WJG82410.1;Name=WJG82410.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=PUW38_07020;product=cardiolipin synthase;protein_id=WJG82410.1;transl_table=11 CP118116.1 Genbank gene 1447719 1447892 . + . ID=gene-PUW38_07025;Name=PUW38_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07025 CP118116.1 Protein Homology CDS 1447719 1447892 . + 0 ID=cds-WJG82411.1;Parent=gene-PUW38_07025;Dbxref=NCBI_GP:WJG82411.1;Name=WJG82411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=PUW38_07025;product=YciY family protein;protein_id=WJG82411.1;transl_table=11 CP118116.1 Genbank gene 1447936 1448232 . - . ID=gene-PUW38_07030;Name=PUW38_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07030 CP118116.1 Protein Homology CDS 1447936 1448232 . - 0 ID=cds-WJG82412.1;Parent=gene-PUW38_07030;Dbxref=NCBI_GP:WJG82412.1;Name=WJG82412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=PUW38_07030;product=YciI family protein;protein_id=WJG82412.1;transl_table=11 CP118116.1 Genbank gene 1448456 1449184 . + . ID=gene-PUW38_07035;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=PUW38_07035 CP118116.1 Protein Homology CDS 1448456 1449184 . + 0 ID=cds-WJG83189.1;Parent=gene-PUW38_07035;Dbxref=NCBI_GP:WJG83189.1;Name=WJG83189.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=PUW38_07035;product=TonB system transport protein TonB;protein_id=WJG83189.1;transl_table=11 CP118116.1 Genbank gene 1449243 1449644 . - . ID=gene-PUW38_07040;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=PUW38_07040 CP118116.1 Protein Homology CDS 1449243 1449644 . - 0 ID=cds-WJG82413.1;Parent=gene-PUW38_07040;Dbxref=NCBI_GP:WJG82413.1;Name=WJG82413.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=PUW38_07040;product=acyl-CoA thioester hydrolase YciA;protein_id=WJG82413.1;transl_table=11 CP118116.1 Genbank gene 1449805 1450344 . - . ID=gene-PUW38_07045;Name=PUW38_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07045 CP118116.1 Protein Homology CDS 1449805 1450344 . - 0 ID=cds-WJG82414.1;Parent=gene-PUW38_07045;Dbxref=NCBI_GP:WJG82414.1;Name=WJG82414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=PUW38_07045;product=septation protein A;protein_id=WJG82414.1;transl_table=11 CP118116.1 Genbank gene 1450401 1451144 . - . ID=gene-PUW38_07050;Name=PUW38_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07050 CP118116.1 Protein Homology CDS 1450401 1451144 . - 0 ID=cds-WJG82415.1;Parent=gene-PUW38_07050;Dbxref=NCBI_GP:WJG82415.1;Name=WJG82415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=PUW38_07050;product=YciC family protein;protein_id=WJG82415.1;transl_table=11 CP118116.1 Genbank gene 1451170 1451574 . - . ID=gene-PUW38_07055;Name=PUW38_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07055 CP118116.1 Protein Homology CDS 1451170 1451574 . - 0 ID=cds-WJG82416.1;Parent=gene-PUW38_07055;Dbxref=NCBI_GP:WJG82416.1;Name=WJG82416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=PUW38_07055;product=YkgJ family cysteine cluster protein;protein_id=WJG82416.1;transl_table=11 CP118116.1 Genbank gene 1451912 1452550 . + . ID=gene-PUW38_07060;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=PUW38_07060 CP118116.1 Protein Homology CDS 1451912 1452550 . + 0 ID=cds-WJG82417.1;Parent=gene-PUW38_07060;Dbxref=NCBI_GP:WJG82417.1;Name=WJG82417.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=PUW38_07060;product=outer membrane protein OmpW;protein_id=WJG82417.1;transl_table=11 CP118116.1 Genbank gene 1452632 1453510 . - . ID=gene-PUW38_07065;Name=PUW38_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07065 CP118116.1 Protein Homology CDS 1452632 1453510 . - 0 ID=cds-WJG82418.1;Parent=gene-PUW38_07065;Dbxref=NCBI_GP:WJG82418.1;Name=WJG82418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=PUW38_07065;product=manganese catalase family protein;protein_id=WJG82418.1;transl_table=11 CP118116.1 Genbank gene 1453530 1454036 . - . ID=gene-PUW38_07070;Name=PUW38_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07070 CP118116.1 Protein Homology CDS 1453530 1454036 . - 0 ID=cds-WJG82419.1;Parent=gene-PUW38_07070;Dbxref=NCBI_GP:WJG82419.1;Name=WJG82419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=PUW38_07070;product=ferritin-like domain-containing protein;protein_id=WJG82419.1;transl_table=11 CP118116.1 Genbank gene 1454110 1454613 . - . ID=gene-PUW38_07075;Name=PUW38_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07075 CP118116.1 Protein Homology CDS 1454110 1454613 . - 0 ID=cds-WJG82420.1;Parent=gene-PUW38_07075;Dbxref=NCBI_GP:WJG82420.1;Name=WJG82420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=PUW38_07075;product=ferritin-like domain-containing protein;protein_id=WJG82420.1;transl_table=11 CP118116.1 Genbank gene 1454703 1454885 . - . ID=gene-PUW38_07080;Name=PUW38_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07080 CP118116.1 Protein Homology CDS 1454703 1454885 . - 0 ID=cds-WJG82421.1;Parent=gene-PUW38_07080;Dbxref=NCBI_GP:WJG82421.1;Name=WJG82421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=PUW38_07080;product=general stress protein;protein_id=WJG82421.1;transl_table=11 CP118116.1 Genbank gene 1455365 1456171 . - . ID=gene-PUW38_07085;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=PUW38_07085 CP118116.1 Protein Homology CDS 1455365 1456171 . - 0 ID=cds-WJG82422.1;Parent=gene-PUW38_07085;Dbxref=NCBI_GP:WJG82422.1;Name=WJG82422.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=PUW38_07085;product=tryptophan synthase subunit alpha;protein_id=WJG82422.1;transl_table=11 CP118116.1 Genbank gene 1456171 1457364 . - . ID=gene-PUW38_07090;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=PUW38_07090 CP118116.1 Protein Homology CDS 1456171 1457364 . - 0 ID=cds-WJG82423.1;Parent=gene-PUW38_07090;Dbxref=NCBI_GP:WJG82423.1;Name=WJG82423.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=PUW38_07090;product=tryptophan synthase subunit beta;protein_id=WJG82423.1;transl_table=11 CP118116.1 Genbank gene 1457374 1458732 . - . ID=gene-PUW38_07095;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=PUW38_07095 CP118116.1 Protein Homology CDS 1457374 1458732 . - 0 ID=cds-WJG82424.1;Parent=gene-PUW38_07095;Dbxref=NCBI_GP:WJG82424.1;Name=WJG82424.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=PUW38_07095;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WJG82424.1;transl_table=11 CP118116.1 Genbank gene 1458736 1460331 . - . ID=gene-PUW38_07100;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=PUW38_07100 CP118116.1 Protein Homology CDS 1458736 1460331 . - 0 ID=cds-WJG82425.1;Parent=gene-PUW38_07100;Dbxref=NCBI_GP:WJG82425.1;Name=WJG82425.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=PUW38_07100;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WJG82425.1;transl_table=11 CP118116.1 Genbank gene 1460331 1461893 . - . ID=gene-PUW38_07105;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=PUW38_07105 CP118116.1 Protein Homology CDS 1460331 1461893 . - 0 ID=cds-WJG82426.1;Parent=gene-PUW38_07105;Dbxref=NCBI_GP:WJG82426.1;Name=WJG82426.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=PUW38_07105;product=anthranilate synthase component I;protein_id=WJG82426.1;transl_table=11 CP118116.1 cmsearch sequence_feature 1461916 1462011 . - . ID=id-CP118116.1:1461916..1462011;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118116.1 Genbank gene 1461988 1462032 . - . ID=gene-PUW38_07110;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=PUW38_07110 CP118116.1 Protein Homology CDS 1461988 1462032 . - 0 ID=cds-WJG83190.1;Parent=gene-PUW38_07110;Dbxref=NCBI_GP:WJG83190.1;Name=WJG83190.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=PUW38_07110;product=trp operon leader peptide;protein_id=WJG83190.1;transl_table=11 CP118116.1 Genbank pseudogene 1462154 1463034 . + . ID=gene-PUW38_07115;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=pseudogene;gene_synonym=trpH,yciV;locus_tag=PUW38_07115;pseudo=true CP118116.1 Protein Homology CDS 1462154 1463034 . + 0 ID=cds-PUW38_07115;Parent=gene-PUW38_07115;Note=frameshifted;gbkey=CDS;gene=rnm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=PUW38_07115;product=RNase AM;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1463042 1463662 . + . ID=gene-PUW38_07120;Name=PUW38_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07120 CP118116.1 Protein Homology CDS 1463042 1463662 . + 0 ID=cds-WJG82427.1;Parent=gene-PUW38_07120;Dbxref=NCBI_GP:WJG82427.1;Name=WJG82427.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=PUW38_07120;product=L-threonylcarbamoyladenylate synthase;protein_id=WJG82427.1;transl_table=11 CP118116.1 Genbank gene 1463763 1464638 . + . ID=gene-PUW38_07125;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=PUW38_07125 CP118116.1 Protein Homology CDS 1463763 1464638 . + 0 ID=cds-WJG82428.1;Parent=gene-PUW38_07125;Dbxref=NCBI_GP:WJG82428.1;Name=WJG82428.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=PUW38_07125;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WJG82428.1;transl_table=11 CP118116.1 Genbank pseudogene 1464725 1465315 . - . ID=gene-PUW38_07130;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=pseudogene;locus_tag=PUW38_07130;pseudo=true CP118116.1 Protein Homology CDS 1464725 1465315 . - 0 ID=cds-PUW38_07130;Parent=gene-PUW38_07130;Note=internal stop;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=PUW38_07130;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1465312 1466073 . - . ID=gene-PUW38_07135;Name=PUW38_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07135 CP118116.1 Protein Homology CDS 1465312 1466073 . - 0 ID=cds-WJG82429.1;Parent=gene-PUW38_07135;Dbxref=NCBI_GP:WJG82429.1;Name=WJG82429.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=PUW38_07135;product=YciK family oxidoreductase;protein_id=WJG82429.1;transl_table=11 CP118116.1 Genbank gene 1466310 1467356 . + . ID=gene-PUW38_07140;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=PUW38_07140 CP118116.1 Protein Homology CDS 1466310 1467356 . + 0 ID=cds-WJG82430.1;Parent=gene-PUW38_07140;Dbxref=NCBI_GP:WJG82430.1;Name=WJG82430.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=PUW38_07140;product=protease SohB;protein_id=WJG82430.1;transl_table=11 CP118116.1 Genbank gene 1467398 1467649 . - . ID=gene-PUW38_07145;Name=PUW38_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07145 CP118116.1 Protein Homology CDS 1467398 1467649 . - 0 ID=cds-WJG82431.1;Parent=gene-PUW38_07145;Dbxref=NCBI_GP:WJG82431.1;Name=WJG82431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=PUW38_07145;product=YciN family protein;protein_id=WJG82431.1;transl_table=11 CP118116.1 Genbank gene 1468052 1470649 . + . ID=gene-PUW38_07150;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=PUW38_07150 CP118116.1 Protein Homology CDS 1468052 1470649 . + 0 ID=cds-WJG82432.1;Parent=gene-PUW38_07150;Dbxref=NCBI_GP:WJG82432.1;Name=WJG82432.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=PUW38_07150;product=type I DNA topoisomerase;protein_id=WJG82432.1;transl_table=11 CP118116.1 Genbank gene 1471060 1472034 . + . ID=gene-PUW38_07155;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=PUW38_07155 CP118116.1 Protein Homology CDS 1471060 1472034 . + 0 ID=cds-WJG82433.1;Parent=gene-PUW38_07155;Dbxref=NCBI_GP:WJG82433.1;Name=WJG82433.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=PUW38_07155;product=HTH-type transcriptional regulator CysB;protein_id=WJG82433.1;transl_table=11 CP118116.1 Genbank gene 1472315 1472455 . + . ID=gene-PUW38_07160;Name=PUW38_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07160 CP118116.1 Protein Homology CDS 1472315 1472455 . + 0 ID=cds-WJG83191.1;Parent=gene-PUW38_07160;Dbxref=NCBI_GP:WJG83191.1;Name=WJG83191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=PUW38_07160;product=YmiA family putative membrane protein;protein_id=WJG83191.1;transl_table=11 CP118116.1 Genbank gene 1472456 1472626 . + . ID=gene-PUW38_07165;Name=PUW38_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07165 CP118116.1 Protein Homology CDS 1472456 1472626 . + 0 ID=cds-WJG82434.1;Parent=gene-PUW38_07165;Dbxref=NCBI_GP:WJG82434.1;Name=WJG82434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=PUW38_07165;product=hypothetical protein;protein_id=WJG82434.1;transl_table=11 CP118116.1 Genbank gene 1472736 1472828 . + . ID=gene-PUW38_07170;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=PUW38_07170 CP118116.1 Protein Homology CDS 1472736 1472828 . + 0 ID=cds-WJG82435.1;Parent=gene-PUW38_07170;Dbxref=NCBI_GP:WJG82435.1;Name=WJG82435.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096370.1;locus_tag=PUW38_07170;product=small membrane protein YmiC;protein_id=WJG82435.1;transl_table=11 CP118116.1 Genbank gene 1473011 1475686 . + . ID=gene-PUW38_07175;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=PUW38_07175 CP118116.1 Protein Homology CDS 1473011 1475686 . + 0 ID=cds-WJG82436.1;Parent=gene-PUW38_07175;Dbxref=NCBI_GP:WJG82436.1;Name=WJG82436.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=PUW38_07175;product=aconitate hydratase AcnA;protein_id=WJG82436.1;transl_table=11 CP118116.1 Genbank gene 1475742 1476332 . - . ID=gene-PUW38_07180;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=PUW38_07180 CP118116.1 Protein Homology CDS 1475742 1476332 . - 0 ID=cds-WJG82437.1;Parent=gene-PUW38_07180;Dbxref=NCBI_GP:WJG82437.1;Name=WJG82437.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=PUW38_07180;product=GTP cyclohydrolase II;protein_id=WJG82437.1;transl_table=11 CP118116.1 Genbank gene 1476528 1477292 . + . ID=gene-PUW38_07185;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=PUW38_07185 CP118116.1 Protein Homology CDS 1476528 1477292 . + 0 ID=cds-WJG82438.1;Parent=gene-PUW38_07185;Dbxref=NCBI_GP:WJG82438.1;Name=WJG82438.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=PUW38_07185;product=phosphatidylglycerophosphatase B;protein_id=WJG82438.1;transl_table=11 CP118116.1 Genbank gene 1477441 1477749 . + . ID=gene-PUW38_07190;Name=PUW38_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07190 CP118116.1 Protein Homology CDS 1477441 1477749 . + 0 ID=cds-WJG82439.1;Parent=gene-PUW38_07190;Dbxref=NCBI_GP:WJG82439.1;Name=WJG82439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=PUW38_07190;product=LapA family protein;protein_id=WJG82439.1;transl_table=11 CP118116.1 Genbank gene 1477756 1478925 . + . ID=gene-PUW38_07195;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=PUW38_07195 CP118116.1 Protein Homology CDS 1477756 1478925 . + 0 ID=cds-WJG82440.1;Parent=gene-PUW38_07195;Dbxref=NCBI_GP:WJG82440.1;Name=WJG82440.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=PUW38_07195;product=lipopolysaccharide assembly protein LapB;protein_id=WJG82440.1;transl_table=11 CP118116.1 Genbank gene 1479116 1479853 . + . ID=gene-PUW38_07200;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=PUW38_07200 CP118116.1 Protein Homology CDS 1479116 1479853 . + 0 ID=cds-WJG82441.1;Parent=gene-PUW38_07200;Dbxref=NCBI_GP:WJG82441.1;Name=WJG82441.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=PUW38_07200;product=orotidine-5'-phosphate decarboxylase;protein_id=WJG82441.1;transl_table=11 CP118116.1 Genbank gene 1479853 1480179 . + . ID=gene-PUW38_07205;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=PUW38_07205 CP118116.1 Protein Homology CDS 1479853 1480179 . + 0 ID=cds-WJG82442.1;Parent=gene-PUW38_07205;Dbxref=NCBI_GP:WJG82442.1;Name=WJG82442.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=PUW38_07205;product=stress response translation initiation inhibitor YciH;protein_id=WJG82442.1;transl_table=11 CP118116.1 Genbank gene 1480299 1480517 . - . ID=gene-PUW38_07210;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=PUW38_07210 CP118116.1 Protein Homology CDS 1480299 1480517 . - 0 ID=cds-WJG82443.1;Parent=gene-PUW38_07210;Dbxref=NCBI_GP:WJG82443.1;Name=WJG82443.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=PUW38_07210;product=osmotically-inducible lipoprotein OsmB;protein_id=WJG82443.1;transl_table=11 CP118116.1 Genbank pseudogene 1480776 1481527 . - . ID=gene-PUW38_07215;Name=PUW38_07215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07215;pseudo=true CP118116.1 Protein Homology CDS 1480776 1481527 . - 0 ID=cds-PUW38_07215;Parent=gene-PUW38_07215;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=PUW38_07215;product=DNA-binding transcriptional regulator YciT;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1481614 1481793 . - . ID=gene-PUW38_07220;Name=PUW38_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07220 CP118116.1 Protein Homology CDS 1481614 1481793 . - 0 ID=cds-WJG82444.1;Parent=gene-PUW38_07220;Dbxref=NCBI_GP:WJG82444.1;Name=WJG82444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=PUW38_07220;product=hypothetical protein;protein_id=WJG82444.1;transl_table=11 CP118116.1 Genbank gene 1481915 1483897 . - . ID=gene-PUW38_07225;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=PUW38_07225 CP118116.1 Protein Homology CDS 1481915 1483897 . - 0 ID=cds-WJG82445.1;Parent=gene-PUW38_07225;Dbxref=NCBI_GP:WJG82445.1;Name=WJG82445.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=PUW38_07225;product=cyclic di-GMP phosphodiesterase;protein_id=WJG82445.1;transl_table=11 CP118116.1 Genbank gene 1484159 1486093 . - . ID=gene-PUW38_07230;Name=PUW38_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07230 CP118116.1 Protein Homology CDS 1484159 1486093 . - 0 ID=cds-WJG82446.1;Parent=gene-PUW38_07230;Dbxref=NCBI_GP:WJG82446.1;Name=WJG82446.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=PUW38_07230;product=exoribonuclease II;protein_id=WJG82446.1;transl_table=11 CP118116.1 Genbank pseudogene 1486338 1487319 . - . ID=gene-PUW38_07235;Name=PUW38_07235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07235;pseudo=true CP118116.1 Protein Homology CDS 1486338 1487319 . - 0 ID=cds-PUW38_07235;Parent=gene-PUW38_07235;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=PUW38_07235;product=CMD domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1487519 1488307 . - . ID=gene-PUW38_07240;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=PUW38_07240 CP118116.1 Protein Homology CDS 1487519 1488307 . - 0 ID=cds-WJG82447.1;Parent=gene-PUW38_07240;Dbxref=NCBI_GP:WJG82447.1;Name=WJG82447.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=PUW38_07240;product=enoyl-ACP reductase FabI;protein_id=WJG82447.1;transl_table=11 CP118116.1 Genbank pseudogene 1488425 1488723 . - . ID=gene-PUW38_07245;Name=PUW38_07245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07245;pseudo=true CP118116.1 Protein Homology CDS 1488425 1488723 . - 0 ID=cds-PUW38_07245;Parent=gene-PUW38_07245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=PUW38_07245;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1488698 1488877 . - . ID=gene-PUW38_07250;Name=PUW38_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07250 CP118116.1 Protein Homology CDS 1488698 1488877 . - 0 ID=cds-WJG82448.1;Parent=gene-PUW38_07250;Dbxref=NCBI_GP:WJG82448.1;Name=WJG82448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=PUW38_07250;product=hypothetical protein;protein_id=WJG82448.1;transl_table=11 CP118116.1 Genbank pseudogene 1488912 1490283 . + . ID=gene-PUW38_07255;Name=steC;gbkey=Gene;gene=steC;gene_biotype=pseudogene;locus_tag=PUW38_07255;pseudo=true CP118116.1 Protein Homology CDS 1488912 1490283 . + 0 ID=cds-PUW38_07255;Parent=gene-PUW38_07255;Note=frameshifted;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=PUW38_07255;product=SPI-2 type III secretion system effector kinase SteC;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1490751 1491458 . + . ID=gene-PUW38_07260;Name=PUW38_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07260 CP118116.1 Protein Homology CDS 1490751 1491458 . + 0 ID=cds-WJG82449.1;Parent=gene-PUW38_07260;Dbxref=NCBI_GP:WJG82449.1;Name=WJG82449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=PUW38_07260;product=EAL domain-containing protein;protein_id=WJG82449.1;transl_table=11 CP118116.1 Genbank gene 1491474 1492280 . - . ID=gene-PUW38_07265;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=PUW38_07265 CP118116.1 Protein Homology CDS 1491474 1492280 . - 0 ID=cds-WJG82450.1;Parent=gene-PUW38_07265;Dbxref=NCBI_GP:WJG82450.1;Name=WJG82450.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=PUW38_07265;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WJG82450.1;transl_table=11 CP118116.1 Genbank gene 1492282 1493274 . - . ID=gene-PUW38_07270;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=PUW38_07270 CP118116.1 Protein Homology CDS 1492282 1493274 . - 0 ID=cds-WJG82451.1;Parent=gene-PUW38_07270;Dbxref=NCBI_GP:WJG82451.1;Name=WJG82451.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=PUW38_07270;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WJG82451.1;transl_table=11 CP118116.1 Genbank gene 1493274 1494164 . - . ID=gene-PUW38_07275;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=PUW38_07275 CP118116.1 Protein Homology CDS 1493274 1494164 . - 0 ID=cds-WJG82452.1;Parent=gene-PUW38_07275;Dbxref=NCBI_GP:WJG82452.1;Name=WJG82452.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=PUW38_07275;product=peptide ABC transporter permease SapC;protein_id=WJG82452.1;transl_table=11 CP118116.1 Genbank gene 1494151 1495116 . - . ID=gene-PUW38_07280;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=PUW38_07280 CP118116.1 Protein Homology CDS 1494151 1495116 . - 0 ID=cds-WJG82453.1;Parent=gene-PUW38_07280;Dbxref=NCBI_GP:WJG82453.1;Name=WJG82453.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=PUW38_07280;product=peptide ABC transporter permease SapB;protein_id=WJG82453.1;transl_table=11 CP118116.1 Genbank gene 1495113 1496762 . - . ID=gene-PUW38_07285;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=PUW38_07285 CP118116.1 Protein Homology CDS 1495113 1496762 . - 0 ID=cds-WJG82454.1;Parent=gene-PUW38_07285;Dbxref=NCBI_GP:WJG82454.1;Name=WJG82454.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=PUW38_07285;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WJG82454.1;transl_table=11 CP118116.1 Genbank gene 1496874 1497854 . - . ID=gene-PUW38_07290;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=PUW38_07290 CP118116.1 Protein Homology CDS 1496874 1497854 . - 0 ID=cds-WJG82455.1;Parent=gene-PUW38_07290;Dbxref=NCBI_GP:WJG82455.1;Name=WJG82455.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=PUW38_07290;product=phage shock protein operon transcriptional activator;protein_id=WJG82455.1;transl_table=11 CP118116.1 Genbank gene 1498025 1498693 . + . ID=gene-PUW38_07295;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=PUW38_07295 CP118116.1 Protein Homology CDS 1498025 1498693 . + 0 ID=cds-WJG82456.1;Parent=gene-PUW38_07295;Dbxref=NCBI_GP:WJG82456.1;Name=WJG82456.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=PUW38_07295;product=phage shock protein PspA;protein_id=WJG82456.1;transl_table=11 CP118116.1 Genbank gene 1498753 1498977 . + . ID=gene-PUW38_07300;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=PUW38_07300 CP118116.1 Protein Homology CDS 1498753 1498977 . + 0 ID=cds-WJG82457.1;Parent=gene-PUW38_07300;Dbxref=NCBI_GP:WJG82457.1;Name=WJG82457.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=PUW38_07300;product=envelope stress response membrane protein PspB;protein_id=WJG82457.1;transl_table=11 CP118116.1 Genbank gene 1498977 1499336 . + . ID=gene-PUW38_07305;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=PUW38_07305 CP118116.1 Protein Homology CDS 1498977 1499336 . + 0 ID=cds-WJG82458.1;Parent=gene-PUW38_07305;Dbxref=NCBI_GP:WJG82458.1;Name=WJG82458.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=PUW38_07305;product=envelope stress response membrane protein PspC;protein_id=WJG82458.1;transl_table=11 CP118116.1 Genbank gene 1499359 1499577 . + . ID=gene-PUW38_07310;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=PUW38_07310 CP118116.1 Protein Homology CDS 1499359 1499577 . + 0 ID=cds-WJG82459.1;Parent=gene-PUW38_07310;Dbxref=NCBI_GP:WJG82459.1;Name=WJG82459.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=PUW38_07310;product=phage shock protein PspD;protein_id=WJG82459.1;transl_table=11 CP118116.1 Genbank gene 1499653 1499967 . + . ID=gene-PUW38_07315;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=PUW38_07315 CP118116.1 Protein Homology CDS 1499653 1499967 . + 0 ID=cds-WJG82460.1;Parent=gene-PUW38_07315;Dbxref=NCBI_GP:WJG82460.1;Name=WJG82460.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=PUW38_07315;product=thiosulfate sulfurtransferase PspE;protein_id=WJG82460.1;transl_table=11 CP118116.1 Genbank pseudogene 1500116 1501512 . + . ID=gene-PUW38_07320;Name=PUW38_07320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07320;pseudo=true CP118116.1 Protein Homology CDS 1500116 1501512 . + 0 ID=cds-PUW38_07320;Parent=gene-PUW38_07320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=PUW38_07320;product=YcjX family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1501509 1502570 . + . ID=gene-PUW38_07325;Name=PUW38_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07325 CP118116.1 Protein Homology CDS 1501509 1502570 . + 0 ID=cds-WJG82461.1;Parent=gene-PUW38_07325;Dbxref=NCBI_GP:WJG82461.1;Name=WJG82461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=PUW38_07325;product=YcjF family protein;protein_id=WJG82461.1;transl_table=11 CP118116.1 Genbank gene 1502718 1504259 . + . ID=gene-PUW38_07330;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=PUW38_07330 CP118116.1 Protein Homology CDS 1502718 1504259 . + 0 ID=cds-WJG82462.1;Parent=gene-PUW38_07330;Dbxref=NCBI_GP:WJG82462.1;Name=WJG82462.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=PUW38_07330;product=transcriptional regulator TyrR;protein_id=WJG82462.1;transl_table=11 CP118116.1 Genbank gene 1504349 1504855 . - . ID=gene-PUW38_07335;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=PUW38_07335 CP118116.1 Protein Homology CDS 1504349 1504855 . - 0 ID=cds-WJG82463.1;Parent=gene-PUW38_07335;Dbxref=NCBI_GP:WJG82463.1;Name=WJG82463.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=PUW38_07335;product=thiol peroxidase;protein_id=WJG82463.1;transl_table=11 CP118116.1 Genbank pseudogene 1504971 1505935 . + . ID=gene-PUW38_07340;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=pseudogene;locus_tag=PUW38_07340;pseudo=true CP118116.1 Protein Homology CDS 1504971 1505935 . + 0 ID=cds-PUW38_07340;Parent=gene-PUW38_07340;Note=frameshifted;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=PUW38_07340;product=L-Ala-D/L-Glu epimerase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1505910 1506638 . - . ID=gene-PUW38_07345;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=PUW38_07345 CP118116.1 Protein Homology CDS 1505910 1506638 . - 0 ID=cds-WJG82464.1;Parent=gene-PUW38_07345;Dbxref=NCBI_GP:WJG82464.1;Name=WJG82464.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=PUW38_07345;product=murein tripeptide amidase MpaA;protein_id=WJG82464.1;transl_table=11 CP118116.1 Genbank gene 1506828 1508441 . + . ID=gene-PUW38_07350;Name=PUW38_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07350 CP118116.1 Protein Homology CDS 1506828 1508441 . + 0 ID=cds-WJG82465.1;Parent=gene-PUW38_07350;Dbxref=NCBI_GP:WJG82465.1;Name=WJG82465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=PUW38_07350;product=peptide ABC transporter substrate-binding protein;protein_id=WJG82465.1;transl_table=11 CP118116.1 Genbank pseudogene 1508538 1509466 . - . ID=gene-PUW38_07355;Name=PUW38_07355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07355;pseudo=true CP118116.1 Protein Homology CDS 1508538 1509466 . - 0 ID=cds-PUW38_07355;Parent=gene-PUW38_07355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=PUW38_07355;product=aromatic alcohol reductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1509585 1510490 . + . ID=gene-PUW38_07360;Name=PUW38_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07360 CP118116.1 Protein Homology CDS 1509585 1510490 . + 0 ID=cds-WJG82466.1;Parent=gene-PUW38_07360;Dbxref=NCBI_GP:WJG82466.1;Name=WJG82466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=PUW38_07360;product=LysR family transcriptional regulator;protein_id=WJG82466.1;transl_table=11 CP118116.1 Genbank pseudogene 1510766 1511634 . + . ID=gene-PUW38_07365;Name=PUW38_07365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07365;pseudo=true CP118116.1 Protein Homology CDS 1510766 1511634 . + 0 ID=cds-PUW38_07365;Parent=gene-PUW38_07365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=PUW38_07365;product=aldo/keto reductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1511725 1512438 . - . ID=gene-PUW38_07370;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=PUW38_07370 CP118116.1 Protein Homology CDS 1511725 1512438 . - 0 ID=cds-WJG82467.1;Parent=gene-PUW38_07370;Dbxref=NCBI_GP:WJG82467.1;Name=WJG82467.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=PUW38_07370;product=SDR family oxidoreductase;protein_id=WJG82467.1;transl_table=11 CP118116.1 Genbank gene 1512516 1513106 . + . ID=gene-PUW38_07375;Name=PUW38_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07375 CP118116.1 Protein Homology CDS 1512516 1513106 . + 0 ID=cds-WJG82468.1;Parent=gene-PUW38_07375;Dbxref=NCBI_GP:WJG82468.1;Name=WJG82468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=PUW38_07375;product=TetR/AcrR family transcriptional regulator;protein_id=WJG82468.1;transl_table=11 CP118116.1 Genbank gene 1513235 1513471 . + . ID=gene-PUW38_07380;Name=PUW38_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07380 CP118116.1 Protein Homology CDS 1513235 1513471 . + 0 ID=cds-WJG82469.1;Parent=gene-PUW38_07380;Dbxref=NCBI_GP:WJG82469.1;Name=WJG82469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=PUW38_07380;product=YgdI/YgdR family lipoprotein;protein_id=WJG82469.1;transl_table=11 CP118116.1 Genbank gene 1513685 1514794 . - . ID=gene-PUW38_07385;Name=PUW38_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07385 CP118116.1 Protein Homology CDS 1513685 1514794 . - 0 ID=cds-WJG83192.1;Parent=gene-PUW38_07385;Dbxref=NCBI_GP:WJG83192.1;Name=WJG83192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=PUW38_07385;product=hypothetical protein;protein_id=WJG83192.1;transl_table=11 CP118116.1 Genbank gene 1515186 1516043 . - . ID=gene-PUW38_07390;Name=PUW38_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07390 CP118116.1 Protein Homology CDS 1515186 1516043 . - 0 ID=cds-WJG82470.1;Parent=gene-PUW38_07390;Dbxref=NCBI_GP:WJG82470.1;Name=WJG82470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=PUW38_07390;product=GyrI-like domain-containing protein;protein_id=WJG82470.1;transl_table=11 CP118116.1 Genbank pseudogene 1516337 1517181 . + . ID=gene-PUW38_07395;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=pseudogene;locus_tag=PUW38_07395;pseudo=true CP118116.1 Protein Homology CDS 1516337 1517181 . + 0 ID=cds-PUW38_07395;Parent=gene-PUW38_07395;Note=frameshifted;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=PUW38_07395;product=two-partner-like secretion system exoprotein ZirU;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1517256 1519231 . + . ID=gene-PUW38_07400;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=pseudogene;locus_tag=PUW38_07400;pseudo=true CP118116.1 Protein Homology CDS 1517256 1519231 . + 0 ID=cds-PUW38_07400;Parent=gene-PUW38_07400;Note=frameshifted;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=PUW38_07400;product=two-partner secretion translocator ZirT;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1519252 1520082 . + . ID=gene-PUW38_07405;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=PUW38_07405 CP118116.1 Protein Homology CDS 1519252 1520082 . + 0 ID=cds-WJG82471.1;Parent=gene-PUW38_07405;Dbxref=NCBI_GP:WJG82471.1;Name=WJG82471.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=PUW38_07405;product=two-partner-like secretion system exoprotein ZirS;protein_id=WJG82471.1;transl_table=11 CP118116.1 Genbank pseudogene 1520181 1520543 . + . ID=gene-PUW38_07410;Name=PUW38_07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07410;pseudo=true CP118116.1 Protein Homology CDS 1520181 1520543 . + 0 ID=cds-PUW38_07410;Parent=gene-PUW38_07410;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=PUW38_07410;product=peroxiredoxin;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1520470 1521180 . - . ID=gene-PUW38_07415;Name=PUW38_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07415 CP118116.1 Protein Homology CDS 1520470 1521180 . - 0 ID=cds-WJG82472.1;Parent=gene-PUW38_07415;Dbxref=NCBI_GP:WJG82472.1;Name=WJG82472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=PUW38_07415;product=B3/4 domain-containing protein;protein_id=WJG82472.1;transl_table=11 CP118116.1 Genbank gene 1521224 1521826 . + . ID=gene-PUW38_07420;Name=PUW38_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07420 CP118116.1 Protein Homology CDS 1521224 1521826 . + 0 ID=cds-WJG82473.1;Parent=gene-PUW38_07420;Dbxref=NCBI_GP:WJG82473.1;Name=WJG82473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=PUW38_07420;product=helix-turn-helix domain-containing protein;protein_id=WJG82473.1;transl_table=11 CP118116.1 Genbank gene 1521908 1522939 . - . ID=gene-PUW38_07425;Name=PUW38_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07425 CP118116.1 Protein Homology CDS 1521908 1522939 . - 0 ID=cds-WJG82474.1;Parent=gene-PUW38_07425;Dbxref=NCBI_GP:WJG82474.1;Name=WJG82474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=PUW38_07425;product=mechanosensitive ion channel family protein;protein_id=WJG82474.1;transl_table=11 CP118116.1 Genbank gene 1523178 1523432 . + . ID=gene-PUW38_07430;Name=PUW38_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07430 CP118116.1 Protein Homology CDS 1523178 1523432 . + 0 ID=cds-WJG82475.1;Parent=gene-PUW38_07430;Dbxref=NCBI_GP:WJG82475.1;Name=WJG82475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=PUW38_07430;product=DUF2534 family protein;protein_id=WJG82475.1;transl_table=11 CP118116.1 Genbank gene 1523487 1524434 . - . ID=gene-PUW38_07435;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=PUW38_07435 CP118116.1 Protein Homology CDS 1523487 1524434 . - 0 ID=cds-WJG82476.1;Parent=gene-PUW38_07435;Dbxref=NCBI_GP:WJG82476.1;Name=WJG82476.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=PUW38_07435;product=universal stress protein UspE;protein_id=WJG82476.1;transl_table=11 CP118116.1 Genbank pseudogene 1524585 1525336 . - . ID=gene-PUW38_07440;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=pseudogene;locus_tag=PUW38_07440;pseudo=true CP118116.1 Protein Homology CDS 1524585 1525336 . - 0 ID=cds-PUW38_07440;Parent=gene-PUW38_07440;Note=frameshifted;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=PUW38_07440;product=fumarate/nitrate reduction transcriptional regulator Fnr;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1525532 1526047 . - . ID=gene-PUW38_07445;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=PUW38_07445 CP118116.1 Protein Homology CDS 1525532 1526047 . - 0 ID=cds-WJG82477.1;Parent=gene-PUW38_07445;Dbxref=NCBI_GP:WJG82477.1;Name=WJG82477.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=PUW38_07445;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WJG82477.1;transl_table=11 CP118116.1 Genbank gene 1526305 1526868 . + . ID=gene-PUW38_07450;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=PUW38_07450 CP118116.1 Protein Homology CDS 1526305 1526868 . + 0 ID=cds-WJG82478.1;Parent=gene-PUW38_07450;Dbxref=NCBI_GP:WJG82478.1;Name=WJG82478.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=PUW38_07450;product=DNA endonuclease SmrA;protein_id=WJG82478.1;transl_table=11 CP118116.1 Genbank gene 1527279 1528433 . + . ID=gene-PUW38_07455;Name=PUW38_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07455 CP118116.1 Protein Homology CDS 1527279 1528433 . + 0 ID=cds-WJG82479.1;Parent=gene-PUW38_07455;Dbxref=NCBI_GP:WJG82479.1;Name=WJG82479.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=PUW38_07455;product=methyl-accepting chemotaxis protein;protein_id=WJG82479.1;transl_table=11 CP118116.1 Genbank gene 1528588 1529562 . + . ID=gene-PUW38_07460;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=PUW38_07460 CP118116.1 Protein Homology CDS 1528588 1529562 . + 0 ID=cds-WJG83193.1;Parent=gene-PUW38_07460;Dbxref=NCBI_GP:WJG83193.1;Name=WJG83193.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=PUW38_07460;product=zinc transporter ZntB;protein_id=WJG83193.1;transl_table=11 CP118116.1 Genbank gene 1529837 1530019 . + . ID=gene-PUW38_07465;Name=PUW38_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07465 CP118116.1 Protein Homology CDS 1529837 1530019 . + 0 ID=cds-WJG82480.1;Parent=gene-PUW38_07465;Dbxref=NCBI_GP:WJG82480.1;Name=WJG82480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=PUW38_07465;product=hypothetical protein;protein_id=WJG82480.1;transl_table=11 CP118116.1 Genbank gene 1530048 1531421 . + . ID=gene-PUW38_07470;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=PUW38_07470 CP118116.1 Protein Homology CDS 1530048 1531421 . + 0 ID=cds-WJG82481.1;Parent=gene-PUW38_07470;Dbxref=NCBI_GP:WJG82481.1;Name=WJG82481.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=PUW38_07470;product=ATP-dependent RNA helicase DbpA;protein_id=WJG82481.1;transl_table=11 CP118116.1 Genbank gene 1531465 1532400 . - . ID=gene-PUW38_07475;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=PUW38_07475 CP118116.1 Protein Homology CDS 1531465 1532400 . - 0 ID=cds-WJG82482.1;Parent=gene-PUW38_07475;Dbxref=NCBI_GP:WJG82482.1;Name=WJG82482.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=PUW38_07475;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WJG82482.1;transl_table=11 CP118116.1 Genbank pseudogene 1532452 1532655 . - . ID=gene-PUW38_07480;Name=PUW38_07480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07480;pseudo=true CP118116.1 Protein Homology CDS 1532452 1532655 . - 0 ID=cds-PUW38_07480;Parent=gene-PUW38_07480;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=PUW38_07480;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1532756 1533094 . + . ID=gene-PUW38_07485;Name=PUW38_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07485 CP118116.1 Protein Homology CDS 1532756 1533094 . + 0 ID=cds-WJG82483.1;Parent=gene-PUW38_07485;Dbxref=NCBI_GP:WJG82483.1;Name=WJG82483.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=PUW38_07485;product=SMR family transporter;protein_id=WJG82483.1;transl_table=11 CP118116.1 Genbank gene 1533144 1533578 . - . ID=gene-PUW38_07490;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=PUW38_07490 CP118116.1 Protein Homology CDS 1533144 1533578 . - 0 ID=cds-WJG82484.1;Parent=gene-PUW38_07490;Dbxref=NCBI_GP:WJG82484.1;Name=WJG82484.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=PUW38_07490;product=universal stress protein UspF;protein_id=WJG82484.1;transl_table=11 CP118116.1 Genbank pseudogene 1534059 1537584 . - . ID=gene-PUW38_07495;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=pseudogene;locus_tag=PUW38_07495;pseudo=true CP118116.1 Protein Homology CDS 1534059 1537584 . - 0 ID=cds-PUW38_07495;Parent=gene-PUW38_07495;Note=frameshifted;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=PUW38_07495;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1537645 1537944 . - . ID=gene-PUW38_07500;Name=PUW38_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07500 CP118116.1 Protein Homology CDS 1537645 1537944 . - 0 ID=cds-WJG82485.1;Parent=gene-PUW38_07500;Dbxref=NCBI_GP:WJG82485.1;Name=WJG82485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=PUW38_07500;product=reverse transcriptase;protein_id=WJG82485.1;transl_table=11 CP118116.1 Genbank gene 1537860 1538126 . + . ID=gene-PUW38_07505;Name=PUW38_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07505 CP118116.1 Protein Homology CDS 1537860 1538126 . + 0 ID=cds-WJG82486.1;Parent=gene-PUW38_07505;Dbxref=NCBI_GP:WJG82486.1;Name=WJG82486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=PUW38_07505;product=DUF333 domain-containing protein;protein_id=WJG82486.1;transl_table=11 CP118116.1 Genbank gene 1538170 1538580 . - . ID=gene-PUW38_07510;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=PUW38_07510 CP118116.1 Protein Homology CDS 1538170 1538580 . - 0 ID=cds-WJG82487.1;Parent=gene-PUW38_07510;Dbxref=NCBI_GP:WJG82487.1;Name=WJG82487.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=PUW38_07510;product=heat shock protein HslJ;protein_id=WJG82487.1;transl_table=11 CP118116.1 Genbank gene 1538691 1539680 . - . ID=gene-PUW38_07515;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=PUW38_07515 CP118116.1 Protein Homology CDS 1538691 1539680 . - 0 ID=cds-WJG82488.1;Parent=gene-PUW38_07515;Dbxref=NCBI_GP:WJG82488.1;Name=WJG82488.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=PUW38_07515;product=D-lactate dehydrogenase;protein_id=WJG82488.1;transl_table=11 CP118116.1 Genbank gene 1539920 1542556 . + . ID=gene-PUW38_07520;Name=PUW38_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07520 CP118116.1 Protein Homology CDS 1539920 1542556 . + 0 ID=cds-WJG82489.1;Parent=gene-PUW38_07520;Dbxref=NCBI_GP:WJG82489.1;Name=WJG82489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=PUW38_07520;product=YdbH family protein;protein_id=WJG82489.1;transl_table=11 CP118116.1 Genbank gene 1542556 1542747 . + . ID=gene-PUW38_07525;Name=PUW38_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07525 CP118116.1 Protein Homology CDS 1542556 1542747 . + 0 ID=cds-WJG82490.1;Parent=gene-PUW38_07525;Dbxref=NCBI_GP:WJG82490.1;Name=WJG82490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=PUW38_07525;product=YnbE family lipoprotein;protein_id=WJG82490.1;transl_table=11 CP118116.1 Genbank gene 1542755 1543078 . + . ID=gene-PUW38_07530;Name=PUW38_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07530 CP118116.1 Protein Homology CDS 1542755 1543078 . + 0 ID=cds-WJG82491.1;Parent=gene-PUW38_07530;Dbxref=NCBI_GP:WJG82491.1;Name=WJG82491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=PUW38_07530;product=YdbL family protein;protein_id=WJG82491.1;transl_table=11 CP118116.1 Genbank gene 1543221 1543670 . + . ID=gene-PUW38_07535;Name=PUW38_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07535 CP118116.1 Protein Homology CDS 1543221 1543670 . + 0 ID=cds-WJG82492.1;Parent=gene-PUW38_07535;Dbxref=NCBI_GP:WJG82492.1;Name=WJG82492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=PUW38_07535;product=GFA family protein;protein_id=WJG82492.1;transl_table=11 CP118116.1 Genbank gene 1543667 1544272 . - . ID=gene-PUW38_07540;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=PUW38_07540 CP118116.1 Protein Homology CDS 1543667 1544272 . - 0 ID=cds-WJG82493.1;Parent=gene-PUW38_07540;Dbxref=NCBI_GP:WJG82493.1;Name=WJG82493.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=PUW38_07540;product=FMN-dependent NADH-azoreductase;protein_id=WJG82493.1;transl_table=11 CP118116.1 Genbank pseudogene 1544472 1548371 . + . ID=gene-PUW38_07545;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=pseudogene;locus_tag=PUW38_07545;pseudo=true CP118116.1 Protein Homology CDS 1544472 1548371 . + 0 ID=cds-PUW38_07545;Parent=gene-PUW38_07545;Note=frameshifted;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=PUW38_07545;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1548435 1549235 . + . ID=gene-PUW38_07550;Name=PUW38_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07550 CP118116.1 Protein Homology CDS 1548435 1549235 . + 0 ID=cds-WJG82494.1;Parent=gene-PUW38_07550;Dbxref=NCBI_GP:WJG82494.1;Name=WJG82494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=PUW38_07550;product=YdcF family protein;protein_id=WJG82494.1;transl_table=11 CP118116.1 Genbank gene 1549352 1549882 . + . ID=gene-PUW38_07555;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=PUW38_07555 CP118116.1 Protein Homology CDS 1549352 1549882 . + 0 ID=cds-WJG82495.1;Parent=gene-PUW38_07555;Dbxref=NCBI_GP:WJG82495.1;Name=WJG82495.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=PUW38_07555;product=cytochrome b561;protein_id=WJG82495.1;transl_table=11 CP118116.1 Genbank gene 1550153 1550815 . - . ID=gene-PUW38_07560;Name=PUW38_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07560 CP118116.1 Protein Homology CDS 1550153 1550815 . - 0 ID=cds-WJG82496.1;Parent=gene-PUW38_07560;Dbxref=NCBI_GP:WJG82496.1;Name=WJG82496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=PUW38_07560;product=class I SAM-dependent methyltransferase;protein_id=WJG82496.1;transl_table=11 CP118116.1 Genbank gene 1551279 1552829 . - . ID=gene-PUW38_07565;Name=PUW38_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07565 CP118116.1 Protein Homology CDS 1551279 1552829 . - 0 ID=cds-WJG82497.1;Parent=gene-PUW38_07565;Dbxref=NCBI_GP:WJG82497.1;Name=WJG82497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=PUW38_07565;product=glycosyltransferase family 39 protein;protein_id=WJG82497.1;transl_table=11 CP118116.1 Genbank gene 1552966 1553646 . - . ID=gene-PUW38_07570;Name=PUW38_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07570 CP118116.1 Protein Homology CDS 1552966 1553646 . - 0 ID=cds-WJG82498.1;Parent=gene-PUW38_07570;Dbxref=NCBI_GP:WJG82498.1;Name=WJG82498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=PUW38_07570;product=amino acid ABC transporter permease;protein_id=WJG82498.1;transl_table=11 CP118116.1 Genbank gene 1553659 1554375 . - . ID=gene-PUW38_07575;Name=PUW38_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07575 CP118116.1 Protein Homology CDS 1553659 1554375 . - 0 ID=cds-WJG82499.1;Parent=gene-PUW38_07575;Dbxref=NCBI_GP:WJG82499.1;Name=WJG82499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196339.1;locus_tag=PUW38_07575;product=amino acid ABC transporter ATP-binding protein;protein_id=WJG82499.1;transl_table=11 CP118116.1 Genbank gene 1554400 1555047 . - . ID=gene-PUW38_07580;Name=PUW38_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07580 CP118116.1 Protein Homology CDS 1554400 1555047 . - 0 ID=cds-WJG82500.1;Parent=gene-PUW38_07580;Dbxref=NCBI_GP:WJG82500.1;Name=WJG82500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=PUW38_07580;product=amino acid ABC transporter permease;protein_id=WJG82500.1;transl_table=11 CP118116.1 Genbank gene 1555054 1555815 . - . ID=gene-PUW38_07585;Name=PUW38_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07585 CP118116.1 Protein Homology CDS 1555054 1555815 . - 0 ID=cds-WJG82501.1;Parent=gene-PUW38_07585;Dbxref=NCBI_GP:WJG82501.1;Name=WJG82501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=PUW38_07585;product=transporter substrate-binding domain-containing protein;protein_id=WJG82501.1;transl_table=11 CP118116.1 Genbank gene 1556723 1557067 . + . ID=gene-PUW38_07590;Name=PUW38_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07590 CP118116.1 Protein Homology CDS 1556723 1557067 . + 0 ID=cds-WJG82502.1;Parent=gene-PUW38_07590;Dbxref=NCBI_GP:WJG82502.1;Name=WJG82502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=PUW38_07590;product=DUF1294 domain-containing protein;protein_id=WJG82502.1;transl_table=11 CP118116.1 Genbank gene 1557188 1558414 . - . ID=gene-PUW38_07595;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=PUW38_07595 CP118116.1 Protein Homology CDS 1557188 1558414 . - 0 ID=cds-WJG82503.1;Parent=gene-PUW38_07595;Dbxref=NCBI_GP:WJG82503.1;Name=WJG82503.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=PUW38_07595;product=SPI-2 type III secretion system effector SseJ;protein_id=WJG82503.1;transl_table=11 CP118116.1 Genbank gene 1558840 1559556 . + . ID=gene-PUW38_07600;Name=PUW38_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07600 CP118116.1 Protein Homology CDS 1558840 1559556 . + 0 ID=cds-WJG82504.1;Parent=gene-PUW38_07600;Dbxref=NCBI_GP:WJG82504.1;Name=WJG82504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=PUW38_07600;product=hypothetical protein;protein_id=WJG82504.1;transl_table=11 CP118116.1 Genbank gene 1559685 1560086 . - . ID=gene-PUW38_07605;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=PUW38_07605 CP118116.1 Protein Homology CDS 1559685 1560086 . - 0 ID=cds-WJG82505.1;Parent=gene-PUW38_07605;Dbxref=NCBI_GP:WJG82505.1;Name=WJG82505.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=PUW38_07605;product=type III secretion system effector SteB;protein_id=WJG82505.1;transl_table=11 CP118116.1 Genbank gene 1560609 1560884 . + . ID=gene-PUW38_07610;Name=PUW38_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07610 CP118116.1 Protein Homology CDS 1560609 1560884 . + 0 ID=cds-WJG82506.1;Parent=gene-PUW38_07610;Dbxref=NCBI_GP:WJG82506.1;Name=WJG82506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=PUW38_07610;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WJG82506.1;transl_table=11 CP118116.1 Genbank gene 1560916 1562034 . + . ID=gene-PUW38_07615;Name=PUW38_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07615 CP118116.1 Protein Homology CDS 1560916 1562034 . + 0 ID=cds-WJG82507.1;Parent=gene-PUW38_07615;Dbxref=NCBI_GP:WJG82507.1;Name=WJG82507.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=PUW38_07615;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WJG82507.1;transl_table=11 CP118116.1 Genbank gene 1562203 1563828 . + . ID=gene-PUW38_07620;Name=PUW38_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07620 CP118116.1 Protein Homology CDS 1562203 1563828 . + 0 ID=cds-WJG82508.1;Parent=gene-PUW38_07620;Dbxref=NCBI_GP:WJG82508.1;Name=WJG82508.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=PUW38_07620;product=methyl-accepting chemotaxis protein;protein_id=WJG82508.1;transl_table=11 CP118116.1 Genbank gene 1563889 1564812 . - . ID=gene-PUW38_07625;Name=PUW38_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07625 CP118116.1 Protein Homology CDS 1563889 1564812 . - 0 ID=cds-WJG82509.1;Parent=gene-PUW38_07625;Dbxref=NCBI_GP:WJG82509.1;Name=WJG82509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=PUW38_07625;product=LysR substrate-binding domain-containing protein;protein_id=WJG82509.1;transl_table=11 CP118116.1 Genbank gene 1565105 1566448 . + . ID=gene-PUW38_07630;Name=PUW38_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07630 CP118116.1 Protein Homology CDS 1565105 1566448 . + 0 ID=cds-WJG82510.1;Parent=gene-PUW38_07630;Dbxref=NCBI_GP:WJG82510.1;Name=WJG82510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=PUW38_07630;product=VOC family protein;protein_id=WJG82510.1;transl_table=11 CP118116.1 Genbank gene 1566497 1568005 . + . ID=gene-PUW38_07635;Name=PUW38_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07635 CP118116.1 Protein Homology CDS 1566497 1568005 . + 0 ID=cds-WJG82511.1;Parent=gene-PUW38_07635;Dbxref=NCBI_GP:WJG82511.1;Name=WJG82511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=PUW38_07635;product=carboxylesterase/lipase family protein;protein_id=WJG82511.1;transl_table=11 CP118116.1 Genbank gene 1568225 1569880 . + . ID=gene-PUW38_07640;Name=PUW38_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07640 CP118116.1 Protein Homology CDS 1568225 1569880 . + 0 ID=cds-WJG82512.1;Parent=gene-PUW38_07640;Dbxref=NCBI_GP:WJG82512.1;Name=WJG82512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=PUW38_07640;product=glucan biosynthesis protein;protein_id=WJG82512.1;transl_table=11 CP118116.1 Genbank gene 1570076 1570651 . + . ID=gene-PUW38_07645;Name=PUW38_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07645 CP118116.1 Protein Homology CDS 1570076 1570651 . + 0 ID=cds-WJG82513.1;Parent=gene-PUW38_07645;Dbxref=NCBI_GP:WJG82513.1;Name=WJG82513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=PUW38_07645;product=YceI family protein;protein_id=WJG82513.1;transl_table=11 CP118116.1 Genbank gene 1570829 1571548 . - . ID=gene-PUW38_07650;Name=PUW38_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07650 CP118116.1 Protein Homology CDS 1570829 1571548 . - 0 ID=cds-WJG82514.1;Parent=gene-PUW38_07650;Dbxref=NCBI_GP:WJG82514.1;Name=WJG82514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=PUW38_07650;product=FadR/GntR family transcriptional regulator;protein_id=WJG82514.1;transl_table=11 CP118116.1 Genbank gene 1571637 1572728 . - . ID=gene-PUW38_07655;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=PUW38_07655 CP118116.1 Protein Homology CDS 1571637 1572728 . - 0 ID=cds-WJG83194.1;Parent=gene-PUW38_07655;Dbxref=NCBI_GP:WJG83194.1;Name=WJG83194.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=PUW38_07655;product=L-idonate 5-dehydrogenase;protein_id=WJG83194.1;transl_table=11 CP118116.1 Genbank gene 1572697 1574058 . - . ID=gene-PUW38_07660;Name=PUW38_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07660 CP118116.1 Protein Homology CDS 1572697 1574058 . - 0 ID=cds-WJG83195.1;Parent=gene-PUW38_07660;Dbxref=NCBI_GP:WJG83195.1;Name=WJG83195.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=PUW38_07660;product=MFS transporter;protein_id=WJG83195.1;transl_table=11 CP118116.1 Genbank gene 1574142 1574909 . - . ID=gene-PUW38_07665;Name=PUW38_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07665 CP118116.1 Protein Homology CDS 1574142 1574909 . - 0 ID=cds-WJG82515.1;Parent=gene-PUW38_07665;Dbxref=NCBI_GP:WJG82515.1;Name=WJG82515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=PUW38_07665;product=SDR family oxidoreductase;protein_id=WJG82515.1;transl_table=11 CP118116.1 Genbank gene 1575246 1576499 . + . ID=gene-PUW38_07670;Name=PUW38_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07670 CP118116.1 Protein Homology CDS 1575246 1576499 . + 0 ID=cds-WJG82516.1;Parent=gene-PUW38_07670;Dbxref=NCBI_GP:WJG82516.1;Name=WJG82516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=PUW38_07670;product=enolase C-terminal domain-like protein;protein_id=WJG82516.1;transl_table=11 CP118116.1 Genbank gene 1576640 1577077 . - . ID=gene-PUW38_07675;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=PUW38_07675 CP118116.1 Protein Homology CDS 1576640 1577077 . - 0 ID=cds-WJG82517.1;Parent=gene-PUW38_07675;Dbxref=NCBI_GP:WJG82517.1;Name=WJG82517.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=PUW38_07675;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WJG82517.1;transl_table=11 CP118116.1 Genbank gene 1577077 1577868 . - . ID=gene-PUW38_07680;Name=PUW38_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07680 CP118116.1 Protein Homology CDS 1577077 1577868 . - 0 ID=cds-WJG82518.1;Parent=gene-PUW38_07680;Dbxref=NCBI_GP:WJG82518.1;Name=WJG82518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=PUW38_07680;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG82518.1;transl_table=11 CP118116.1 Genbank gene 1577884 1578516 . - . ID=gene-PUW38_07685;Name=PUW38_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07685 CP118116.1 Protein Homology CDS 1577884 1578516 . - 0 ID=cds-WJG82519.1;Parent=gene-PUW38_07685;Dbxref=NCBI_GP:WJG82519.1;Name=WJG82519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=PUW38_07685;product=ribulose-phosphate 3 epimerase family protein;protein_id=WJG82519.1;transl_table=11 CP118116.1 Genbank gene 1578528 1578965 . - . ID=gene-PUW38_07690;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=PUW38_07690 CP118116.1 Protein Homology CDS 1578528 1578965 . - 0 ID=cds-WJG82520.1;Parent=gene-PUW38_07690;Dbxref=NCBI_GP:WJG82520.1;Name=WJG82520.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=PUW38_07690;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WJG82520.1;transl_table=11 CP118116.1 Genbank gene 1579097 1579903 . - . ID=gene-PUW38_07695;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=PUW38_07695 CP118116.1 Protein Homology CDS 1579097 1579903 . - 0 ID=cds-WJG82521.1;Parent=gene-PUW38_07695;Dbxref=NCBI_GP:WJG82521.1;Name=WJG82521.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=PUW38_07695;product=BtpA family protein SgcQ;protein_id=WJG82521.1;transl_table=11 CP118116.1 Genbank gene 1579917 1581230 . - . ID=gene-PUW38_07700;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=PUW38_07700 CP118116.1 Protein Homology CDS 1579917 1581230 . - 0 ID=cds-WJG82522.1;Parent=gene-PUW38_07700;Dbxref=NCBI_GP:WJG82522.1;Name=WJG82522.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=PUW38_07700;product=PTS sugar transporter subunit IIC SgcC;protein_id=WJG82522.1;transl_table=11 CP118116.1 Genbank gene 1581241 1581522 . - . ID=gene-PUW38_07705;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=PUW38_07705 CP118116.1 Protein Homology CDS 1581241 1581522 . - 0 ID=cds-WJG82523.1;Parent=gene-PUW38_07705;Dbxref=NCBI_GP:WJG82523.1;Name=WJG82523.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=PUW38_07705;product=PTS sugar transporter subunit IIB SgcB;protein_id=WJG82523.1;transl_table=11 CP118116.1 Genbank gene 1581519 1582637 . - . ID=gene-PUW38_07710;Name=PUW38_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07710 CP118116.1 Protein Homology CDS 1581519 1582637 . - 0 ID=cds-WJG82524.1;Parent=gene-PUW38_07710;Dbxref=NCBI_GP:WJG82524.1;Name=WJG82524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=PUW38_07710;product=M42 family metallopeptidase;protein_id=WJG82524.1;transl_table=11 CP118116.1 Genbank gene 1582854 1583393 . + . ID=gene-PUW38_07715;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=PUW38_07715 CP118116.1 Protein Homology CDS 1582854 1583393 . + 0 ID=cds-WJG82525.1;Parent=gene-PUW38_07715;Dbxref=NCBI_GP:WJG82525.1;Name=WJG82525.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=PUW38_07715;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WJG82525.1;transl_table=11 CP118116.1 Genbank gene 1583390 1584370 . - . ID=gene-PUW38_07720;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=PUW38_07720 CP118116.1 Protein Homology CDS 1583390 1584370 . - 0 ID=cds-WJG82526.1;Parent=gene-PUW38_07720;Dbxref=NCBI_GP:WJG82526.1;Name=WJG82526.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=PUW38_07720;product=YdcK family protein;protein_id=WJG82526.1;transl_table=11 CP118116.1 Genbank gene 1584477 1585490 . + . ID=gene-PUW38_07725;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=PUW38_07725 CP118116.1 Protein Homology CDS 1584477 1585490 . + 0 ID=cds-WJG82527.1;Parent=gene-PUW38_07725;Dbxref=NCBI_GP:WJG82527.1;Name=WJG82527.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=PUW38_07725;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WJG82527.1;transl_table=11 CP118116.1 Genbank gene 1585477 1586073 . + . ID=gene-PUW38_07730;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=PUW38_07730 CP118116.1 Protein Homology CDS 1585477 1586073 . + 0 ID=cds-WJG82528.1;Parent=gene-PUW38_07730;Dbxref=NCBI_GP:WJG82528.1;Name=WJG82528.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=PUW38_07730;product=tellurite resistance methyltransferase TehB;protein_id=WJG82528.1;transl_table=11 CP118116.1 Genbank gene 1586229 1586897 . + . ID=gene-PUW38_07735;Name=PUW38_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07735 CP118116.1 Protein Homology CDS 1586229 1586897 . + 0 ID=cds-WJG82529.1;Parent=gene-PUW38_07735;Dbxref=NCBI_GP:WJG82529.1;Name=WJG82529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=PUW38_07735;product=DUF3313 domain-containing protein;protein_id=WJG82529.1;transl_table=11 CP118116.1 Genbank gene 1586951 1588129 . - . ID=gene-PUW38_07740;Name=PUW38_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07740 CP118116.1 Protein Homology CDS 1586951 1588129 . - 0 ID=cds-WJG82530.1;Parent=gene-PUW38_07740;Dbxref=NCBI_GP:WJG82530.1;Name=WJG82530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=PUW38_07740;product=benzoate/H(+) symporter BenE family transporter;protein_id=WJG82530.1;transl_table=11 CP118116.1 Genbank gene 1588221 1588757 . + . ID=gene-PUW38_07745;Name=PUW38_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07745 CP118116.1 Protein Homology CDS 1588221 1588757 . + 0 ID=cds-WJG82531.1;Parent=gene-PUW38_07745;Dbxref=NCBI_GP:WJG82531.1;Name=WJG82531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369539.1;locus_tag=PUW38_07745;product=XRE family transcriptional regulator;protein_id=WJG82531.1;transl_table=11 CP118116.1 Genbank gene 1588836 1590800 . + . ID=gene-PUW38_07750;Name=PUW38_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07750 CP118116.1 Protein Homology CDS 1588836 1590800 . + 0 ID=cds-WJG82532.1;Parent=gene-PUW38_07750;Dbxref=NCBI_GP:WJG82532.1;Name=WJG82532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=PUW38_07750;product=U32 family peptidase;protein_id=WJG82532.1;transl_table=11 CP118116.1 Genbank gene 1590801 1591031 . - . ID=gene-PUW38_07755;Name=PUW38_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07755 CP118116.1 Protein Homology CDS 1590801 1591031 . - 0 ID=cds-WJG83196.1;Parent=gene-PUW38_07755;Dbxref=NCBI_GP:WJG83196.1;Name=WJG83196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=PUW38_07755;product=DUF2554 family protein;protein_id=WJG83196.1;transl_table=11 CP118116.1 Genbank pseudogene 1591305 1592254 . - . ID=gene-PUW38_07760;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=pseudogene;locus_tag=PUW38_07760;pseudo=true CP118116.1 Protein Homology CDS 1591305 1592254 . - 0 ID=cds-PUW38_07760;Parent=gene-PUW38_07760;Note=frameshifted;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=PUW38_07760;product=SPI-2 type III secretion system effector SifB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1592791 1593189 . + . ID=gene-PUW38_07765;Name=PUW38_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07765 CP118116.1 Protein Homology CDS 1592791 1593189 . + 0 ID=cds-WJG82533.1;Parent=gene-PUW38_07765;Dbxref=NCBI_GP:WJG82533.1;Name=WJG82533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=PUW38_07765;product=D-alanyl-D-alanine dipeptidase;protein_id=WJG82533.1;transl_table=11 CP118116.1 Genbank gene 1593222 1593452 . + . ID=gene-PUW38_07770;Name=PUW38_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07770 CP118116.1 Protein Homology CDS 1593222 1593452 . + 0 ID=cds-WJG82534.1;Parent=gene-PUW38_07770;Dbxref=NCBI_GP:WJG82534.1;Name=WJG82534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=PUW38_07770;product=hypothetical protein;protein_id=WJG82534.1;transl_table=11 CP118116.1 Genbank gene 1593711 1594481 . + . ID=gene-PUW38_07775;Name=PUW38_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07775 CP118116.1 Protein Homology CDS 1593711 1594481 . + 0 ID=cds-WJG82535.1;Parent=gene-PUW38_07775;Dbxref=NCBI_GP:WJG82535.1;Name=WJG82535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=PUW38_07775;product=M15 family metallopeptidase;protein_id=WJG82535.1;transl_table=11 CP118116.1 Genbank gene 1594617 1596041 . + . ID=gene-PUW38_07780;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=PUW38_07780 CP118116.1 Protein Homology CDS 1594617 1596041 . + 0 ID=cds-WJG82536.1;Parent=gene-PUW38_07780;Dbxref=NCBI_GP:WJG82536.1;Name=WJG82536.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=PUW38_07780;product=GntR family transcriptional regulator YdcR;protein_id=WJG82536.1;transl_table=11 CP118116.1 Genbank pseudogene 1596177 1597600 . + . ID=gene-PUW38_07785;Name=patD;gbkey=Gene;gene=patD;gene_biotype=pseudogene;locus_tag=PUW38_07785;pseudo=true CP118116.1 Protein Homology CDS 1596177 1597600 . + 0 ID=cds-PUW38_07785;Parent=gene-PUW38_07785;Note=frameshifted;Ontology_term=GO:0009447,GO:0019145;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase activity|0019145||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310075.1;locus_tag=PUW38_07785;product=aminobutyraldehyde dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1597705 1597800 . - . ID=gene-PUW38_07790;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=PUW38_07790 CP118116.1 Protein Homology CDS 1597705 1597800 . - 0 ID=cds-WJG82537.1;Parent=gene-PUW38_07790;Dbxref=NCBI_GP:WJG82537.1;Name=WJG82537.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=PUW38_07790;product=stress response membrane protein YncL;protein_id=WJG82537.1;transl_table=11 CP118116.1 Genbank gene 1597999 1598172 . + . ID=gene-PUW38_07795;Name=PUW38_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07795 CP118116.1 Protein Homology CDS 1597999 1598172 . + 0 ID=cds-WJG83197.1;Parent=gene-PUW38_07795;Dbxref=NCBI_GP:WJG83197.1;Name=WJG83197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=PUW38_07795;product=GhoT/OrtT family toxin;protein_id=WJG83197.1;transl_table=11 CP118116.1 Genbank gene 1598217 1600361 . - . ID=gene-PUW38_07800;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=PUW38_07800 CP118116.1 Protein Homology CDS 1598217 1600361 . - 0 ID=cds-WJG82538.1;Parent=gene-PUW38_07800;Dbxref=NCBI_GP:WJG82538.1;Name=WJG82538.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=PUW38_07800;product=virulence-associated effector SrfC;protein_id=WJG82538.1;transl_table=11 CP118116.1 Genbank pseudogene 1600358 1602154 . - . ID=gene-PUW38_07805;Name=PUW38_07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07805;pseudo=true CP118116.1 Protein Homology CDS 1600358 1602154 . - 0 ID=cds-PUW38_07805;Parent=gene-PUW38_07805;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW38_07805;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1602156 1603034 . + . ID=gene-PUW38_07810;Name=PUW38_07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07810;pseudo=true CP118116.1 Protein Homology CDS 1602156 1603034 . + 0 ID=cds-PUW38_07810;Parent=gene-PUW38_07810;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW38_07810;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1603027 1603380 . - . ID=gene-PUW38_07815;Name=PUW38_07815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07815;pseudo=true CP118116.1 Protein Homology CDS 1603027 1603380 . - 0 ID=cds-PUW38_07815;Parent=gene-PUW38_07815;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW38_07815;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1603385 1604710 . - . ID=gene-PUW38_07820;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=PUW38_07820 CP118116.1 Protein Homology CDS 1603385 1604710 . - 0 ID=cds-WJG82539.1;Parent=gene-PUW38_07820;Dbxref=NCBI_GP:WJG82539.1;Name=WJG82539.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=PUW38_07820;product=virulence-associated effector SrfA;protein_id=WJG82539.1;transl_table=11 CP118116.1 Genbank gene 1604934 1605167 . + . ID=gene-PUW38_07825;Name=PUW38_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07825 CP118116.1 Protein Homology CDS 1604934 1605167 . + 0 ID=cds-WJG82540.1;Parent=gene-PUW38_07825;Dbxref=NCBI_GP:WJG82540.1;Name=WJG82540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=PUW38_07825;product=YdcY family protein;protein_id=WJG82540.1;transl_table=11 CP118116.1 Genbank gene 1605172 1605621 . - . ID=gene-PUW38_07830;Name=PUW38_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07830 CP118116.1 Protein Homology CDS 1605172 1605621 . - 0 ID=cds-WJG82541.1;Parent=gene-PUW38_07830;Dbxref=NCBI_GP:WJG82541.1;Name=WJG82541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=PUW38_07830;product=DMT family transporter;protein_id=WJG82541.1;transl_table=11 CP118116.1 Genbank gene 1605621 1606136 . - . ID=gene-PUW38_07835;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=PUW38_07835 CP118116.1 Protein Homology CDS 1605621 1606136 . - 0 ID=cds-WJG82542.1;Parent=gene-PUW38_07835;Dbxref=NCBI_GP:WJG82542.1;Name=WJG82542.1;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=PUW38_07835;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WJG82542.1;transl_table=11 CP118116.1 Genbank gene 1606348 1607385 . + . ID=gene-PUW38_07840;Name=PUW38_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07840 CP118116.1 Protein Homology CDS 1606348 1607385 . + 0 ID=cds-WJG82543.1;Parent=gene-PUW38_07840;Dbxref=NCBI_GP:WJG82543.1;Name=WJG82543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=PUW38_07840;product=NADP-dependent oxidoreductase;protein_id=WJG82543.1;transl_table=11 CP118116.1 Genbank gene 1607719 1608384 . + . ID=gene-PUW38_07845;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=PUW38_07845 CP118116.1 Protein Homology CDS 1607719 1608384 . + 0 ID=cds-WJG82544.1;Parent=gene-PUW38_07845;Dbxref=NCBI_GP:WJG82544.1;Name=WJG82544.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=PUW38_07845;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WJG82544.1;transl_table=11 CP118116.1 Genbank pseudogene 1608440 1610559 . - . ID=gene-PUW38_07850;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=pseudogene;locus_tag=PUW38_07850;pseudo=true CP118116.1 Protein Homology CDS 1608440 1610559 . - 0 ID=cds-PUW38_07850;Parent=gene-PUW38_07850;Note=frameshifted;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=PUW38_07850;product=TonB-dependent receptor PqqU;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1610823 1611888 . + . ID=gene-PUW38_07855;Name=PUW38_07855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07855;pseudo=true CP118116.1 Protein Homology CDS 1610823 1611888 . + 0 ID=cds-PUW38_07855;Parent=gene-PUW38_07855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=PUW38_07855;product=YncE family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1611842 1611994 . + . ID=gene-PUW38_07860;Name=PUW38_07860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_07860;pseudo=true CP118116.1 Protein Homology CDS 1611842 1611994 . + 0 ID=cds-PUW38_07860;Parent=gene-PUW38_07860;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=PUW38_07860;product=YgdI/YgdR family lipoprotein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1612071 1613564 . - . ID=gene-PUW38_07865;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=PUW38_07865 CP118116.1 Protein Homology CDS 1612071 1613564 . - 0 ID=cds-WJG82545.1;Parent=gene-PUW38_07865;Dbxref=NCBI_GP:WJG82545.1;Name=WJG82545.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=PUW38_07865;product=L-asparagine permease;protein_id=WJG82545.1;transl_table=11 CP118116.1 Genbank gene 1614077 1614709 . + . ID=gene-PUW38_07870;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=PUW38_07870 CP118116.1 Protein Homology CDS 1614077 1614709 . + 0 ID=cds-WJG82546.1;Parent=gene-PUW38_07870;Dbxref=NCBI_GP:WJG82546.1;Name=WJG82546.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=PUW38_07870;product=type III secretion system effector SteA;protein_id=WJG82546.1;transl_table=11 CP118116.1 Genbank gene 1614993 1615838 . + . ID=gene-PUW38_07875;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=PUW38_07875 CP118116.1 Protein Homology CDS 1614993 1615838 . + 0 ID=cds-WJG82547.1;Parent=gene-PUW38_07875;Dbxref=NCBI_GP:WJG82547.1;Name=WJG82547.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=PUW38_07875;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WJG82547.1;transl_table=11 CP118116.1 Genbank gene 1615874 1616767 . - . ID=gene-PUW38_07880;Name=PUW38_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07880 CP118116.1 Protein Homology CDS 1615874 1616767 . - 0 ID=cds-WJG82548.1;Parent=gene-PUW38_07880;Dbxref=NCBI_GP:WJG82548.1;Name=WJG82548.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=PUW38_07880;product=PhzF family isomerase;protein_id=WJG82548.1;transl_table=11 CP118116.1 Genbank gene 1616873 1617553 . - . ID=gene-PUW38_07885;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PUW38_07885 CP118116.1 Protein Homology CDS 1616873 1617553 . - 0 ID=cds-WJG82549.1;Parent=gene-PUW38_07885;Dbxref=NCBI_GP:WJG82549.1;Name=WJG82549.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=PUW38_07885;product=respiratory nitrate reductase subunit gamma;protein_id=WJG82549.1;transl_table=11 CP118116.1 Genbank gene 1617550 1618245 . - . ID=gene-PUW38_07890;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=PUW38_07890 CP118116.1 Protein Homology CDS 1617550 1618245 . - 0 ID=cds-WJG82550.1;Parent=gene-PUW38_07890;Dbxref=NCBI_GP:WJG82550.1;Name=WJG82550.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=PUW38_07890;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WJG82550.1;transl_table=11 CP118116.1 Genbank gene 1618245 1619789 . - . ID=gene-PUW38_07895;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PUW38_07895 CP118116.1 Protein Homology CDS 1618245 1619789 . - 0 ID=cds-WJG82551.1;Parent=gene-PUW38_07895;Dbxref=NCBI_GP:WJG82551.1;Name=WJG82551.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=PUW38_07895;product=nitrate reductase subunit beta;protein_id=WJG82551.1;transl_table=11 CP118116.1 Genbank gene 1619786 1623526 . - . ID=gene-PUW38_07900;Name=PUW38_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07900 CP118116.1 Protein Homology CDS 1619786 1623526 . - 0 ID=cds-WJG82552.1;Parent=gene-PUW38_07900;Dbxref=NCBI_GP:WJG82552.1;Name=WJG82552.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=PUW38_07900;product=nitrate reductase subunit alpha;protein_id=WJG82552.1;transl_table=11 CP118116.1 Genbank gene 1623618 1625006 . - . ID=gene-PUW38_07905;Name=PUW38_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07905 CP118116.1 Protein Homology CDS 1623618 1625006 . - 0 ID=cds-WJG82553.1;Parent=gene-PUW38_07905;Dbxref=NCBI_GP:WJG82553.1;Name=WJG82553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=PUW38_07905;product=NarK family nitrate/nitrite MFS transporter;protein_id=WJG82553.1;transl_table=11 CP118116.1 Genbank gene 1625221 1625799 . - . ID=gene-PUW38_07910;Name=PUW38_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07910 CP118116.1 Protein Homology CDS 1625221 1625799 . - 0 ID=cds-WJG82554.1;Parent=gene-PUW38_07910;Dbxref=NCBI_GP:WJG82554.1;Name=WJG82554.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=PUW38_07910;product=TetR family transcriptional regulator;protein_id=WJG82554.1;transl_table=11 CP118116.1 Genbank gene 1625917 1627404 . + . ID=gene-PUW38_07915;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=PUW38_07915 CP118116.1 Protein Homology CDS 1625917 1627404 . + 0 ID=cds-WJG82555.1;Parent=gene-PUW38_07915;Dbxref=NCBI_GP:WJG82555.1;Name=WJG82555.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=PUW38_07915;product=methyl viologen efflux MFS transporter SmvA;protein_id=WJG82555.1;transl_table=11 CP118116.1 Genbank gene 1627429 1627809 . - . ID=gene-PUW38_07920;Name=PUW38_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07920 CP118116.1 Protein Homology CDS 1627429 1627809 . - 0 ID=cds-WJG83198.1;Parent=gene-PUW38_07920;Dbxref=NCBI_GP:WJG83198.1;Name=WJG83198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=PUW38_07920;product=GFA family protein;protein_id=WJG83198.1;transl_table=11 CP118116.1 Genbank gene 1627953 1629041 . - . ID=gene-PUW38_07925;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=PUW38_07925 CP118116.1 Protein Homology CDS 1627953 1629041 . - 0 ID=cds-WJG82556.1;Parent=gene-PUW38_07925;Dbxref=NCBI_GP:WJG82556.1;Name=WJG82556.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=PUW38_07925;product=porin OmpD;protein_id=WJG82556.1;transl_table=11 CP118116.1 Genbank gene 1629565 1630446 . - . ID=gene-PUW38_07930;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=PUW38_07930 CP118116.1 Protein Homology CDS 1629565 1630446 . - 0 ID=cds-WJG82557.1;Parent=gene-PUW38_07930;Dbxref=NCBI_GP:WJG82557.1;Name=WJG82557.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=PUW38_07930;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WJG82557.1;transl_table=11 CP118116.1 Genbank gene 1630724 1633771 . + . ID=gene-PUW38_07935;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PUW38_07935 CP118116.1 Protein Homology CDS 1630724 1633771 . + 0 ID=cds-WJG82558.1;Parent=gene-PUW38_07935;Dbxref=NCBI_GP:WJG82558.1;Name=WJG82558.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=PUW38_07935;product=formate dehydrogenase-N subunit alpha;protein_id=WJG82558.1;transl_except=(pos:1631309..1631311%2Caa:Sec);transl_table=11 CP118116.1 Genbank gene 1633785 1634669 . + . ID=gene-PUW38_07940;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PUW38_07940 CP118116.1 Protein Homology CDS 1633785 1634669 . + 0 ID=cds-WJG82559.1;Parent=gene-PUW38_07940;Dbxref=NCBI_GP:WJG82559.1;Name=WJG82559.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=PUW38_07940;product=formate dehydrogenase subunit beta;protein_id=WJG82559.1;transl_table=11 CP118116.1 Genbank gene 1634662 1635318 . + . ID=gene-PUW38_07945;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=PUW38_07945 CP118116.1 Protein Homology CDS 1634662 1635318 . + 0 ID=cds-WJG82560.1;Parent=gene-PUW38_07945;Dbxref=NCBI_GP:WJG82560.1;Name=WJG82560.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=PUW38_07945;product=formate dehydrogenase-N subunit gamma;protein_id=WJG82560.1;transl_table=11 CP118116.1 Genbank gene 1635409 1636410 . - . ID=gene-PUW38_07950;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=PUW38_07950 CP118116.1 Protein Homology CDS 1635409 1636410 . - 0 ID=cds-WJG82561.1;Parent=gene-PUW38_07950;Dbxref=NCBI_GP:WJG82561.1;Name=WJG82561.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=PUW38_07950;product=alcohol dehydrogenase AdhP;protein_id=WJG82561.1;transl_table=11 CP118116.1 Genbank gene 1636692 1638389 . - . ID=gene-PUW38_07955;Name=PUW38_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07955 CP118116.1 Protein Homology CDS 1636692 1638389 . - 0 ID=cds-WJG82562.1;Parent=gene-PUW38_07955;Dbxref=NCBI_GP:WJG82562.1;Name=WJG82562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=PUW38_07955;product=NAD-dependent malic enzyme;protein_id=WJG82562.1;transl_table=11 CP118116.1 Genbank gene 1638566 1638709 . - . ID=gene-PUW38_07960;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=PUW38_07960 CP118116.1 Protein Homology CDS 1638566 1638709 . - 0 ID=cds-WJG82563.1;Parent=gene-PUW38_07960;Dbxref=NCBI_GP:WJG82563.1;Name=WJG82563.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=PUW38_07960;product=stationary-phase-induced ribosome-associated protein;protein_id=WJG82563.1;transl_table=11 CP118116.1 Genbank gene 1638804 1639019 . - . ID=gene-PUW38_07965;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=PUW38_07965 CP118116.1 Protein Homology CDS 1638804 1639019 . - 0 ID=cds-WJG82564.1;Parent=gene-PUW38_07965;Dbxref=NCBI_GP:WJG82564.1;Name=WJG82564.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=PUW38_07965;product=biofilm-dependent modulation protein;protein_id=WJG82564.1;transl_table=11 CP118116.1 Genbank gene 1639532 1639963 . + . ID=gene-PUW38_07970;Name=PUW38_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07970 CP118116.1 Protein Homology CDS 1639532 1639963 . + 0 ID=cds-WJG82565.1;Parent=gene-PUW38_07970;Dbxref=NCBI_GP:WJG82565.1;Name=WJG82565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=PUW38_07970;product=OsmC family protein;protein_id=WJG82565.1;transl_table=11 CP118116.1 Genbank gene 1640313 1640642 . + . ID=gene-PUW38_07975;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=PUW38_07975 CP118116.1 Protein Homology CDS 1640313 1640642 . + 0 ID=cds-WJG82566.1;Parent=gene-PUW38_07975;Dbxref=NCBI_GP:WJG82566.1;Name=WJG82566.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=PUW38_07975;product=acid-activated periplasmic chaperone HdeB;protein_id=WJG82566.1;transl_table=11 CP118116.1 Genbank gene 1640785 1641570 . + . ID=gene-PUW38_07980;Name=PUW38_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_07980 CP118116.1 Protein Homology CDS 1640785 1641570 . + 0 ID=cds-WJG82567.1;Parent=gene-PUW38_07980;Dbxref=NCBI_GP:WJG82567.1;Name=WJG82567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=PUW38_07980;product=OBAP family protein;protein_id=WJG82567.1;transl_table=11 CP118116.1 Genbank gene 1641794 1643482 . + . ID=gene-PUW38_07985;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=PUW38_07985 CP118116.1 Protein Homology CDS 1641794 1643482 . + 0 ID=cds-WJG82568.1;Parent=gene-PUW38_07985;Dbxref=NCBI_GP:WJG82568.1;Name=WJG82568.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944943.1;locus_tag=PUW38_07985;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WJG82568.1;transl_table=11 CP118116.1 Genbank pseudogene 1643479 1646008 . + . ID=gene-PUW38_07990;Name=treY;gbkey=Gene;gene=treY;gene_biotype=pseudogene;locus_tag=PUW38_07990;pseudo=true CP118116.1 Protein Homology CDS 1643479 1646008 . + 0 ID=cds-PUW38_07990;Parent=gene-PUW38_07990;Note=frameshifted;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=PUW38_07990;product=malto-oligosyltrehalose synthase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1646065 1648140 . + . ID=gene-PUW38_07995;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PUW38_07995 CP118116.1 Protein Homology CDS 1646065 1648140 . + 0 ID=cds-WJG82569.1;Parent=gene-PUW38_07995;Dbxref=NCBI_GP:WJG82569.1;Name=WJG82569.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=PUW38_07995;product=glycogen debranching protein GlgX;protein_id=WJG82569.1;transl_table=11 CP118116.1 Genbank gene 1648253 1649455 . - . ID=gene-PUW38_08000;Name=PUW38_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08000 CP118116.1 Protein Homology CDS 1648253 1649455 . - 0 ID=cds-WJG82570.1;Parent=gene-PUW38_08000;Dbxref=NCBI_GP:WJG82570.1;Name=WJG82570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=PUW38_08000;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WJG82570.1;transl_table=11 CP118116.1 Genbank pseudogene 1649468 1649758 . - . ID=gene-PUW38_08005;Name=PUW38_08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08005;pseudo=true CP118116.1 Protein Homology CDS 1649468 1649758 . - 0 ID=cds-PUW38_08005;Parent=gene-PUW38_08005;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=PUW38_08005;product=Na+/H+ antiporter NhaC family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1649758 1650336 . - . ID=gene-PUW38_08010;Name=PUW38_08010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08010;pseudo=true CP118116.1 Protein Homology CDS 1649758 1650336 . - 0 ID=cds-PUW38_08010;Parent=gene-PUW38_08010;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=PUW38_08010;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1650632 1650754 . - . ID=gene-PUW38_08015;Name=PUW38_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08015 CP118116.1 GeneMarkS-2+ CDS 1650632 1650754 . - 0 ID=cds-WJG82571.1;Parent=gene-PUW38_08015;Dbxref=NCBI_GP:WJG82571.1;Name=WJG82571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_08015;product=hypothetical protein;protein_id=WJG82571.1;transl_table=11 CP118116.1 Genbank pseudogene 1651136 1651303 . - . ID=gene-PUW38_08020;Name=PUW38_08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08020;pseudo=true CP118116.1 Protein Homology CDS 1651136 1651303 . - 0 ID=cds-PUW38_08020;Parent=gene-PUW38_08020;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=PUW38_08020;product=DUF1493 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1651303 1651719 . + . ID=gene-PUW38_08025;Name=PUW38_08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08025;pseudo=true CP118116.1 Protein Homology CDS 1651303 1651719 . + 0 ID=cds-PUW38_08025;Parent=gene-PUW38_08025;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=PUW38_08025;product=PhoPQ-activated protein PqaA family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1651716 1652306 . + . ID=gene-PUW38_08030;Name=PUW38_08030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08030;pseudo=true CP118116.1 Protein Homology CDS 1651716 1652306 . + 0 ID=cds-PUW38_08030;Parent=gene-PUW38_08030;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=PUW38_08030;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1652281 1653306 . + . ID=gene-PUW38_08035;Name=PUW38_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08035 CP118116.1 Protein Homology CDS 1652281 1653306 . + 0 ID=cds-WJG82572.1;Parent=gene-PUW38_08035;Dbxref=NCBI_GP:WJG82572.1;Name=WJG82572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=PUW38_08035;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WJG82572.1;transl_table=11 CP118116.1 Genbank gene 1653365 1654156 . - . ID=gene-PUW38_08040;Name=PUW38_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08040 CP118116.1 Protein Homology CDS 1653365 1654156 . - 0 ID=cds-WJG82573.1;Parent=gene-PUW38_08040;Dbxref=NCBI_GP:WJG82573.1;Name=WJG82573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=PUW38_08040;product=FadR/GntR family transcriptional regulator;protein_id=WJG82573.1;transl_table=11 CP118116.1 Genbank gene 1654202 1655293 . - . ID=gene-PUW38_08045;Name=PUW38_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08045 CP118116.1 Protein Homology CDS 1654202 1655293 . - 0 ID=cds-WJG82574.1;Parent=gene-PUW38_08045;Dbxref=NCBI_GP:WJG82574.1;Name=WJG82574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=PUW38_08045;product=linear amide C-N hydrolase;protein_id=WJG82574.1;transl_table=11 CP118116.1 Genbank gene 1655721 1656824 . + . ID=gene-PUW38_08050;Name=PUW38_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08050 CP118116.1 Protein Homology CDS 1655721 1656824 . + 0 ID=cds-WJG82575.1;Parent=gene-PUW38_08050;Dbxref=NCBI_GP:WJG82575.1;Name=WJG82575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=PUW38_08050;product=hydrogenase small subunit;protein_id=WJG82575.1;transl_table=11 CP118116.1 Genbank gene 1656827 1658629 . + . ID=gene-PUW38_08055;Name=PUW38_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08055 CP118116.1 Protein Homology CDS 1656827 1658629 . + 0 ID=cds-WJG82576.1;Parent=gene-PUW38_08055;Dbxref=NCBI_GP:WJG82576.1;Name=WJG82576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=PUW38_08055;product=nickel-dependent hydrogenase large subunit;protein_id=WJG82576.1;transl_table=11 CP118116.1 Genbank gene 1658580 1659323 . + . ID=gene-PUW38_08060;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=PUW38_08060 CP118116.1 Protein Homology CDS 1658580 1659323 . + 0 ID=cds-WJG82577.1;Parent=gene-PUW38_08060;Dbxref=NCBI_GP:WJG82577.1;Name=WJG82577.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=PUW38_08060;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WJG82577.1;transl_table=11 CP118116.1 Genbank gene 1659329 1659937 . + . ID=gene-PUW38_08065;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=PUW38_08065 CP118116.1 Protein Homology CDS 1659329 1659937 . + 0 ID=cds-WJG82578.1;Parent=gene-PUW38_08065;Dbxref=NCBI_GP:WJG82578.1;Name=WJG82578.1;Ontology_term=GO:0051604,GO:0004190,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=PUW38_08065;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WJG82578.1;transl_table=11 CP118116.1 Genbank gene 1659937 1660236 . + . ID=gene-PUW38_08070;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=PUW38_08070 CP118116.1 Protein Homology CDS 1659937 1660236 . + 0 ID=cds-WJG82579.1;Parent=gene-PUW38_08070;Dbxref=NCBI_GP:WJG82579.1;Name=WJG82579.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=PUW38_08070;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WJG82579.1;transl_table=11 CP118116.1 Genbank gene 1660233 1660643 . + . ID=gene-PUW38_08075;Name=PUW38_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08075 CP118116.1 Protein Homology CDS 1660233 1660643 . + 0 ID=cds-WJG82580.1;Parent=gene-PUW38_08075;Dbxref=NCBI_GP:WJG82580.1;Name=WJG82580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=PUW38_08075;product=hydrogenase;protein_id=WJG82580.1;transl_table=11 CP118116.1 Genbank gene 1660661 1661722 . + . ID=gene-PUW38_08080;Name=PUW38_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08080 CP118116.1 Protein Homology CDS 1660661 1661722 . + 0 ID=cds-WJG82581.1;Parent=gene-PUW38_08080;Dbxref=NCBI_GP:WJG82581.1;Name=WJG82581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=PUW38_08080;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WJG82581.1;transl_table=11 CP118116.1 Genbank gene 1661710 1662597 . + . ID=gene-PUW38_08085;Name=PUW38_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08085 CP118116.1 Protein Homology CDS 1661710 1662597 . + 0 ID=cds-WJG82582.1;Parent=gene-PUW38_08085;Dbxref=NCBI_GP:WJG82582.1;Name=WJG82582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=PUW38_08085;product=ATP/GTP-binding protein;protein_id=WJG82582.1;transl_table=11 CP118116.1 Genbank gene 1662610 1662951 . + . ID=gene-PUW38_08090;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW38_08090 CP118116.1 Protein Homology CDS 1662610 1662951 . + 0 ID=cds-WJG82583.1;Parent=gene-PUW38_08090;Dbxref=NCBI_GP:WJG82583.1;Name=WJG82583.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=PUW38_08090;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJG82583.1;transl_table=11 CP118116.1 Genbank gene 1663092 1664210 . - . ID=gene-PUW38_08095;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=PUW38_08095 CP118116.1 Protein Homology CDS 1663092 1664210 . - 0 ID=cds-WJG82584.1;Parent=gene-PUW38_08095;Dbxref=NCBI_GP:WJG82584.1;Name=WJG82584.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=PUW38_08095;product=porin OmpC;protein_id=WJG82584.1;transl_table=11 CP118116.1 Genbank gene 1664927 1665469 . + . ID=gene-PUW38_08100;Name=PUW38_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08100 CP118116.1 Protein Homology CDS 1664927 1665469 . + 0 ID=cds-WJG82585.1;Parent=gene-PUW38_08100;Dbxref=NCBI_GP:WJG82585.1;Name=WJG82585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=PUW38_08100;product=nuclear transport factor 2 family protein;protein_id=WJG82585.1;transl_table=11 CP118116.1 Genbank pseudogene 1665525 1666440 . - . ID=gene-PUW38_08105;Name=PUW38_08105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08105;pseudo=true CP118116.1 Protein Homology CDS 1665525 1666440 . - 0 ID=cds-PUW38_08105;Parent=gene-PUW38_08105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=PUW38_08105;product=bestrophin family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1666695 1667054 . - . ID=gene-PUW38_08110;Name=PUW38_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08110 CP118116.1 Protein Homology CDS 1666695 1667054 . - 0 ID=cds-WJG82586.1;Parent=gene-PUW38_08110;Dbxref=NCBI_GP:WJG82586.1;Name=WJG82586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=PUW38_08110;product=DUF4186 domain-containing protein;protein_id=WJG82586.1;transl_table=11 CP118116.1 Genbank gene 1667054 1667980 . - . ID=gene-PUW38_08115;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=PUW38_08115 CP118116.1 Protein Homology CDS 1667054 1667980 . - 0 ID=cds-WJG82587.1;Parent=gene-PUW38_08115;Dbxref=NCBI_GP:WJG82587.1;Name=WJG82587.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=PUW38_08115;product=glutaminase B;protein_id=WJG82587.1;transl_table=11 CP118116.1 Genbank gene 1668053 1669441 . - . ID=gene-PUW38_08120;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=PUW38_08120 CP118116.1 Protein Homology CDS 1668053 1669441 . - 0 ID=cds-WJG82588.1;Parent=gene-PUW38_08120;Dbxref=NCBI_GP:WJG82588.1;Name=WJG82588.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=PUW38_08120;product=succinate-semialdehyde dehydrogenase;protein_id=WJG82588.1;transl_table=11 CP118116.1 Genbank gene 1669544 1670416 . + . ID=gene-PUW38_08125;Name=PUW38_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08125 CP118116.1 Protein Homology CDS 1669544 1670416 . + 0 ID=cds-WJG82589.1;Parent=gene-PUW38_08125;Dbxref=NCBI_GP:WJG82589.1;Name=WJG82589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=PUW38_08125;product=LysR substrate-binding domain-containing protein;protein_id=WJG82589.1;transl_table=11 CP118116.1 Genbank gene 1670532 1671722 . + . ID=gene-PUW38_08130;Name=PUW38_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08130 CP118116.1 Protein Homology CDS 1670532 1671722 . + 0 ID=cds-WJG82590.1;Parent=gene-PUW38_08130;Dbxref=NCBI_GP:WJG82590.1;Name=WJG82590.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=PUW38_08130;product=sugar transporter;protein_id=WJG82590.1;transl_table=11 CP118116.1 Genbank gene 1671769 1672434 . - . ID=gene-PUW38_08135;Name=PUW38_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08135 CP118116.1 Protein Homology CDS 1671769 1672434 . - 0 ID=cds-WJG82591.1;Parent=gene-PUW38_08135;Dbxref=NCBI_GP:WJG82591.1;Name=WJG82591.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=PUW38_08135;product=MarC family NAAT transporter;protein_id=WJG82591.1;transl_table=11 CP118116.1 Genbank gene 1672693 1673127 . + . ID=gene-PUW38_08140;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=PUW38_08140 CP118116.1 Protein Homology CDS 1672693 1673127 . + 0 ID=cds-WJG82592.1;Parent=gene-PUW38_08140;Dbxref=NCBI_GP:WJG82592.1;Name=WJG82592.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=PUW38_08140;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WJG82592.1;transl_table=11 CP118116.1 Genbank gene 1673147 1673530 . + . ID=gene-PUW38_08145;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=PUW38_08145 CP118116.1 Protein Homology CDS 1673147 1673530 . + 0 ID=cds-WJG82593.1;Parent=gene-PUW38_08145;Dbxref=NCBI_GP:WJG82593.1;Name=WJG82593.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=PUW38_08145;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WJG82593.1;transl_table=11 CP118116.1 Genbank gene 1673559 1673774 . + . ID=gene-PUW38_08150;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=PUW38_08150 CP118116.1 Protein Homology CDS 1673559 1673774 . + 0 ID=cds-WJG82594.1;Parent=gene-PUW38_08150;Dbxref=NCBI_GP:WJG82594.1;Name=WJG82594.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=PUW38_08150;product=multiple antibiotic resistance protein MarB;protein_id=WJG82594.1;transl_table=11 CP118116.1 Genbank gene 1673893 1674795 . - . ID=gene-PUW38_08155;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=PUW38_08155 CP118116.1 Protein Homology CDS 1673893 1674795 . - 0 ID=cds-WJG82595.1;Parent=gene-PUW38_08155;Dbxref=NCBI_GP:WJG82595.1;Name=WJG82595.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=PUW38_08155;product=O-acetylserine/cysteine exporter;protein_id=WJG82595.1;transl_table=11 CP118116.1 Genbank gene 1675023 1676213 . + . ID=gene-PUW38_08160;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=PUW38_08160 CP118116.1 Protein Homology CDS 1675023 1676213 . + 0 ID=cds-WJG82596.1;Parent=gene-PUW38_08160;Dbxref=NCBI_GP:WJG82596.1;Name=WJG82596.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=PUW38_08160;product=efflux MFS transporter YdeE;protein_id=WJG82596.1;transl_table=11 CP118116.1 Genbank gene 1676460 1676555 . + . ID=gene-PUW38_08165;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=PUW38_08165 CP118116.1 Protein Homology CDS 1676460 1676555 . + 0 ID=cds-WJG82597.1;Parent=gene-PUW38_08165;Dbxref=NCBI_GP:WJG82597.1;Name=WJG82597.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=PUW38_08165;product=protein MgtS;protein_id=WJG82597.1;transl_table=11 CP118116.1 Genbank gene 1676903 1677295 . - . ID=gene-PUW38_08170;Name=PUW38_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08170 CP118116.1 Protein Homology CDS 1676903 1677295 . - 0 ID=cds-WJG82598.1;Parent=gene-PUW38_08170;Dbxref=NCBI_GP:WJG82598.1;Name=WJG82598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=PUW38_08170;product=YdeI family stress tolerance OB fold protein;protein_id=WJG82598.1;transl_table=11 CP118116.1 Genbank gene 1677723 1678250 . + . ID=gene-PUW38_08175;Name=PUW38_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08175 CP118116.1 Protein Homology CDS 1677723 1678250 . + 0 ID=cds-WJG82599.1;Parent=gene-PUW38_08175;Dbxref=NCBI_GP:WJG82599.1;Name=WJG82599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=PUW38_08175;product=2-oxo-tetronate isomerase;protein_id=WJG82599.1;transl_table=11 CP118116.1 Genbank gene 1678370 1678552 . - . ID=gene-PUW38_08180;Name=PUW38_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08180 CP118116.1 Protein Homology CDS 1678370 1678552 . - 0 ID=cds-WJG82600.1;Parent=gene-PUW38_08180;Dbxref=NCBI_GP:WJG82600.1;Name=WJG82600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=PUW38_08180;product=general stress protein;protein_id=WJG82600.1;transl_table=11 CP118116.1 Genbank pseudogene 1678896 1680937 . - . ID=gene-PUW38_08185;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=pseudogene;locus_tag=PUW38_08185;pseudo=true CP118116.1 Protein Homology CDS 1678896 1680937 . - 0 ID=cds-PUW38_08185;Parent=gene-PUW38_08185;Note=frameshifted;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=PUW38_08185;product=peptidyl-dipeptidase Dcp;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1681076 1681822 . + . ID=gene-PUW38_08190;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=PUW38_08190 CP118116.1 Protein Homology CDS 1681076 1681822 . + 0 ID=cds-WJG82601.1;Parent=gene-PUW38_08190;Dbxref=NCBI_GP:WJG82601.1;Name=WJG82601.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=PUW38_08190;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WJG82601.1;transl_table=11 CP118116.1 Genbank gene 1681952 1682638 . + . ID=gene-PUW38_08195;Name=PUW38_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08195 CP118116.1 Protein Homology CDS 1681952 1682638 . + 0 ID=cds-WJG82602.1;Parent=gene-PUW38_08195;Dbxref=NCBI_GP:WJG82602.1;Name=WJG82602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=PUW38_08195;product=GntR family transcriptional regulator;protein_id=WJG82602.1;transl_table=11 CP118116.1 Genbank gene 1682820 1683023 . + . ID=gene-PUW38_08200;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=PUW38_08200 CP118116.1 Protein Homology CDS 1682820 1683023 . + 0 ID=cds-WJG82603.1;Parent=gene-PUW38_08200;Dbxref=NCBI_GP:WJG82603.1;Name=WJG82603.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=PUW38_08200;product=putative selenium delivery protein YdfZ;protein_id=WJG82603.1;transl_table=11 CP118116.1 Genbank gene 1683090 1684019 . - . ID=gene-PUW38_08205;Name=PUW38_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08205 CP118116.1 Protein Homology CDS 1683090 1684019 . - 0 ID=cds-WJG83199.1;Parent=gene-PUW38_08205;Dbxref=NCBI_GP:WJG83199.1;Name=WJG83199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019736.2;locus_tag=PUW38_08205;product=mannitol dehydrogenase family protein;protein_id=WJG83199.1;transl_table=11 CP118116.1 Genbank gene 1684048 1684557 . - . ID=gene-PUW38_08210;Name=PUW38_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08210 CP118116.1 Protein Homology CDS 1684048 1684557 . - 0 ID=cds-WJG82604.1;Parent=gene-PUW38_08210;Dbxref=NCBI_GP:WJG82604.1;Name=WJG82604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013403.2;locus_tag=PUW38_08210;product=hypothetical protein;protein_id=WJG82604.1;transl_table=11 CP118116.1 Genbank pseudogene 1684701 1686078 . - . ID=gene-PUW38_08215;Name=PUW38_08215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08215;pseudo=true CP118116.1 Protein Homology CDS 1684701 1686078 . - 0 ID=cds-PUW38_08215;Parent=gene-PUW38_08215;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=PUW38_08215;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1686132 1687151 . - . ID=gene-PUW38_08220;Name=PUW38_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08220 CP118116.1 Protein Homology CDS 1686132 1687151 . - 0 ID=cds-WJG82605.1;Parent=gene-PUW38_08220;Dbxref=NCBI_GP:WJG82605.1;Name=WJG82605.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=PUW38_08220;product=Zn-dependent oxidoreductase;protein_id=WJG82605.1;transl_table=11 CP118116.1 Genbank gene 1687162 1688376 . - . ID=gene-PUW38_08225;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=PUW38_08225 CP118116.1 Protein Homology CDS 1687162 1688376 . - 0 ID=cds-WJG82606.1;Parent=gene-PUW38_08225;Dbxref=NCBI_GP:WJG82606.1;Name=WJG82606.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=PUW38_08225;product=starvation-sensing protein RspA;protein_id=WJG82606.1;transl_table=11 CP118116.1 Genbank gene 1688498 1688824 . - . ID=gene-PUW38_08230;Name=PUW38_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08230 CP118116.1 Protein Homology CDS 1688498 1688824 . - 0 ID=cds-WJG82607.1;Parent=gene-PUW38_08230;Dbxref=NCBI_GP:WJG82607.1;Name=WJG82607.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=PUW38_08230;product=YnfA family protein;protein_id=WJG82607.1;transl_table=11 CP118116.1 Genbank gene 1688976 1689317 . + . ID=gene-PUW38_08235;Name=PUW38_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08235 CP118116.1 Protein Homology CDS 1688976 1689317 . + 0 ID=cds-WJG82608.1;Parent=gene-PUW38_08235;Dbxref=NCBI_GP:WJG82608.1;Name=WJG82608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=PUW38_08235;product=DUF1283 family protein;protein_id=WJG82608.1;transl_table=11 CP118116.1 Genbank gene 1689353 1689913 . + . ID=gene-PUW38_08240;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=PUW38_08240 CP118116.1 Protein Homology CDS 1689353 1689913 . + 0 ID=cds-WJG82609.1;Parent=gene-PUW38_08240;Dbxref=NCBI_GP:WJG82609.1;Name=WJG82609.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=PUW38_08240;product=spermidine N1-acetyltransferase;protein_id=WJG82609.1;transl_table=11 CP118116.1 Genbank gene 1689954 1690664 . - . ID=gene-PUW38_08245;Name=PUW38_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08245 CP118116.1 Protein Homology CDS 1689954 1690664 . - 0 ID=cds-WJG82610.1;Parent=gene-PUW38_08245;Dbxref=NCBI_GP:WJG82610.1;Name=WJG82610.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=PUW38_08245;product=YnfC family lipoprotein;protein_id=WJG82610.1;transl_table=11 CP118116.1 Genbank gene 1690768 1691076 . + . ID=gene-PUW38_08250;Name=PUW38_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08250 CP118116.1 Protein Homology CDS 1690768 1691076 . + 0 ID=cds-WJG82611.1;Parent=gene-PUW38_08250;Dbxref=NCBI_GP:WJG82611.1;Name=WJG82611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=PUW38_08250;product=DUF1161 domain-containing protein;protein_id=WJG82611.1;transl_table=11 CP118116.1 Genbank pseudogene 1691230 1693418 . + . ID=gene-PUW38_08255;Name=PUW38_08255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08255;pseudo=true CP118116.1 Protein Homology CDS 1691230 1693418 . + 0 ID=cds-PUW38_08255;Parent=gene-PUW38_08255;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460459.1;locus_tag=PUW38_08255;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1693517 1695952 . + . ID=gene-PUW38_08260;Name=PUW38_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08260 CP118116.1 Protein Homology CDS 1693517 1695952 . + 0 ID=cds-WJG82612.1;Parent=gene-PUW38_08260;Dbxref=NCBI_GP:WJG82612.1;Name=WJG82612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=PUW38_08260;product=dimethyl sulfoxide reductase subunit A;protein_id=WJG82612.1;transl_table=11 CP118116.1 Genbank pseudogene 1695963 1696579 . + . ID=gene-PUW38_08265;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=PUW38_08265;pseudo=true CP118116.1 Protein Homology CDS 1695963 1696579 . + 0 ID=cds-PUW38_08265;Parent=gene-PUW38_08265;Note=frameshifted;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PUW38_08265;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1696581 1697438 . + . ID=gene-PUW38_08270;Name=PUW38_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08270 CP118116.1 Protein Homology CDS 1696581 1697438 . + 0 ID=cds-WJG82613.1;Parent=gene-PUW38_08270;Dbxref=NCBI_GP:WJG82613.1;Name=WJG82613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=PUW38_08270;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJG82613.1;transl_table=11 CP118116.1 Genbank gene 1697481 1698095 . + . ID=gene-PUW38_08275;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=PUW38_08275 CP118116.1 Protein Homology CDS 1697481 1698095 . + 0 ID=cds-WJG82614.1;Parent=gene-PUW38_08275;Dbxref=NCBI_GP:WJG82614.1;Name=WJG82614.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=PUW38_08275;product=Tat proofreading chaperone DmsD;protein_id=WJG82614.1;transl_table=11 CP118116.1 Genbank gene 1698400 1699077 . + . ID=gene-PUW38_08280;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PUW38_08280 CP118116.1 Protein Homology CDS 1698400 1699077 . + 0 ID=cds-WJG82615.1;Parent=gene-PUW38_08280;Dbxref=NCBI_GP:WJG82615.1;Name=WJG82615.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=PUW38_08280;product=osmoprotectant ABC transporter permease OsmY;protein_id=WJG82615.1;transl_table=11 CP118116.1 Genbank gene 1699139 1700041 . + . ID=gene-PUW38_08285;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=PUW38_08285 CP118116.1 Protein Homology CDS 1699139 1700041 . + 0 ID=cds-WJG82616.1;Parent=gene-PUW38_08285;Dbxref=NCBI_GP:WJG82616.1;Name=WJG82616.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=PUW38_08285;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WJG82616.1;transl_table=11 CP118116.1 Genbank gene 1700051 1700698 . + . ID=gene-PUW38_08290;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=PUW38_08290 CP118116.1 Protein Homology CDS 1700051 1700698 . + 0 ID=cds-WJG82617.1;Parent=gene-PUW38_08290;Dbxref=NCBI_GP:WJG82617.1;Name=WJG82617.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=PUW38_08290;product=osmoprotectant ABC transporter permease OsmW;protein_id=WJG82617.1;transl_table=11 CP118116.1 Genbank gene 1700698 1701846 . + . ID=gene-PUW38_08295;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=PUW38_08295 CP118116.1 Protein Homology CDS 1700698 1701846 . + 0 ID=cds-WJG82618.1;Parent=gene-PUW38_08295;Dbxref=NCBI_GP:WJG82618.1;Name=WJG82618.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=PUW38_08295;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WJG82618.1;transl_table=11 CP118116.1 Genbank pseudogene 1701982 1703270 . + . ID=gene-PUW38_08300;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=pseudogene;locus_tag=PUW38_08300;pseudo=true CP118116.1 Protein Homology CDS 1701982 1703270 . + 0 ID=cds-PUW38_08300;Parent=gene-PUW38_08300;Note=frameshifted;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=PUW38_08300;product=voltage-gated ClC-type chloride channel ClcB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1703226 1703921 . - . ID=gene-PUW38_08305;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PUW38_08305 CP118116.1 Protein Homology CDS 1703226 1703921 . - 0 ID=cds-WJG82619.1;Parent=gene-PUW38_08305;Dbxref=NCBI_GP:WJG82619.1;Name=WJG82619.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=PUW38_08305;product=dethiobiotin synthase;protein_id=WJG82619.1;transl_table=11 CP118116.1 Genbank gene 1704047 1705267 . - . ID=gene-PUW38_08310;Name=PUW38_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08310 CP118116.1 Protein Homology CDS 1704047 1705267 . - 0 ID=cds-WJG82620.1;Parent=gene-PUW38_08310;Dbxref=NCBI_GP:WJG82620.1;Name=WJG82620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=PUW38_08310;product=ROK family transcriptional regulator;protein_id=WJG82620.1;transl_table=11 CP118116.1 Genbank gene 1705395 1706294 . - . ID=gene-PUW38_08315;Name=PUW38_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08315 CP118116.1 Protein Homology CDS 1705395 1706294 . - 0 ID=cds-WJG82621.1;Parent=gene-PUW38_08315;Dbxref=NCBI_GP:WJG82621.1;Name=WJG82621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=PUW38_08315;product=LysR family transcriptional regulator;protein_id=WJG82621.1;transl_table=11 CP118116.1 Genbank pseudogene 1706414 1707667 . + . ID=gene-PUW38_08320;Name=PUW38_08320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08320;pseudo=true CP118116.1 Protein Homology CDS 1706414 1707667 . + 0 ID=cds-PUW38_08320;Parent=gene-PUW38_08320;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=PUW38_08320;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1707734 1707826 . - . ID=gene-PUW38_08325;Name=PUW38_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08325 CP118116.1 Protein Homology CDS 1707734 1707826 . - 0 ID=cds-WJG82622.1;Parent=gene-PUW38_08325;Dbxref=NCBI_GP:WJG82622.1;Name=WJG82622.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=PUW38_08325;product=KPN_01571 family protein;protein_id=WJG82622.1;transl_table=11 CP118116.1 Genbank gene 1708062 1708310 . + . ID=gene-PUW38_08330;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=PUW38_08330 CP118116.1 Protein Homology CDS 1708062 1708310 . + 0 ID=cds-WJG83200.1;Parent=gene-PUW38_08330;Dbxref=NCBI_GP:WJG83200.1;Name=WJG83200.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=PUW38_08330;product=acid resistance repetitive basic protein Asr;protein_id=WJG83200.1;transl_table=11 CP118116.1 Genbank pseudogene 1708579 1708980 . + . ID=gene-PUW38_08335;Name=PUW38_08335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08335;pseudo=true CP118116.1 Protein Homology CDS 1708579 1708980 . + 0 ID=cds-PUW38_08335;Parent=gene-PUW38_08335;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=PUW38_08335;product=serine protease;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1709203 1710237 . + . ID=gene-PUW38_08340;Name=PUW38_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08340 CP118116.1 Protein Homology CDS 1709203 1710237 . + 0 ID=cds-WJG82623.1;Parent=gene-PUW38_08340;Dbxref=NCBI_GP:WJG82623.1;Name=WJG82623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=PUW38_08340;product=AI-2E family transporter;protein_id=WJG82623.1;transl_table=11 CP118116.1 Genbank gene 1710412 1711800 . - . ID=gene-PUW38_08345;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=PUW38_08345 CP118116.1 Protein Homology CDS 1710412 1711800 . - 0 ID=cds-WJG82624.1;Parent=gene-PUW38_08345;Dbxref=NCBI_GP:WJG82624.1;Name=WJG82624.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=PUW38_08345;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WJG82624.1;transl_table=11 CP118116.1 Genbank gene 1711811 1713340 . - . ID=gene-PUW38_08350;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=PUW38_08350 CP118116.1 Protein Homology CDS 1711811 1713340 . - 0 ID=cds-WJG82625.1;Parent=gene-PUW38_08350;Dbxref=NCBI_GP:WJG82625.1;Name=WJG82625.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=PUW38_08350;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WJG82625.1;transl_table=11 CP118116.1 Genbank pseudogene 1713791 1713870 . + . ID=gene-PUW38_08355;Name=PUW38_08355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08355;pseudo=true CP118116.1 Protein Homology CDS 1713791 1713870 . + 0 ID=cds-PUW38_08355;Parent=gene-PUW38_08355;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226730.1;locus_tag=PUW38_08355;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1713867 1714811 . + . ID=gene-PUW38_08360;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=PUW38_08360 CP118116.1 Protein Homology CDS 1713867 1714811 . + 0 ID=cds-WJG82626.1;Parent=gene-PUW38_08360;Dbxref=NCBI_GP:WJG82626.1;Name=WJG82626.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=PUW38_08360;product=DUF1471 family protein YdgH;protein_id=WJG82626.1;transl_table=11 CP118116.1 Genbank gene 1714985 1715278 . - . ID=gene-PUW38_08365;Name=PUW38_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08365 CP118116.1 GeneMarkS-2+ CDS 1714985 1715278 . - 0 ID=cds-WJG83325.1;Parent=gene-PUW38_08365;Dbxref=NCBI_GP:WJG83325.1;Name=WJG83325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_08365;product=hypothetical protein;protein_id=WJG83325.1;transl_table=11 CP118116.1 Genbank gene 1715160 1716491 . + . ID=gene-PUW38_08370;Name=PUW38_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08370 CP118116.1 Protein Homology CDS 1715160 1716491 . + 0 ID=cds-WJG82627.1;Parent=gene-PUW38_08370;Dbxref=NCBI_GP:WJG82627.1;Name=WJG82627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=PUW38_08370;product=amino acid permease;protein_id=WJG82627.1;transl_table=11 CP118116.1 Genbank gene 1716553 1716888 . - . ID=gene-PUW38_08375;Name=PUW38_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08375 CP118116.1 Protein Homology CDS 1716553 1716888 . - 0 ID=cds-WJG82628.1;Parent=gene-PUW38_08375;Dbxref=NCBI_GP:WJG82628.1;Name=WJG82628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=PUW38_08375;product=GlpM family protein;protein_id=WJG82628.1;transl_table=11 CP118116.1 Genbank gene 1717015 1717746 . + . ID=gene-PUW38_08380;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=PUW38_08380 CP118116.1 Protein Homology CDS 1717015 1717746 . + 0 ID=cds-WJG82629.1;Parent=gene-PUW38_08380;Dbxref=NCBI_GP:WJG82629.1;Name=WJG82629.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=PUW38_08380;product=two-component system response regulator RstA;protein_id=WJG82629.1;transl_table=11 CP118116.1 Genbank gene 1718226 1719371 . + . ID=gene-PUW38_08385;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=PUW38_08385 CP118116.1 Protein Homology CDS 1718226 1719371 . + 0 ID=cds-WJG82630.1;Parent=gene-PUW38_08385;Dbxref=NCBI_GP:WJG82630.1;Name=WJG82630.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=PUW38_08385;product=porin OmpS2;protein_id=WJG82630.1;transl_table=11 CP118116.1 Genbank pseudogene 1719524 1721230 . + . ID=gene-PUW38_08390;Name=PUW38_08390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08390;pseudo=true CP118116.1 Protein Homology CDS 1719524 1721230 . + 0 ID=cds-PUW38_08390;Parent=gene-PUW38_08390;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=PUW38_08390;product=amidohydrolase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1721341 1722642 . + . ID=gene-PUW38_08395;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=PUW38_08395 CP118116.1 Protein Homology CDS 1721341 1722642 . + 0 ID=cds-WJG82631.1;Parent=gene-PUW38_08395;Dbxref=NCBI_GP:WJG82631.1;Name=WJG82631.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=PUW38_08395;product=two-component system sensor histidine kinase RstB;protein_id=WJG82631.1;transl_table=11 CP118116.1 Genbank gene 1722718 1723647 . + . ID=gene-PUW38_08400;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=PUW38_08400 CP118116.1 Protein Homology CDS 1722718 1723647 . + 0 ID=cds-WJG83201.1;Parent=gene-PUW38_08400;Dbxref=NCBI_GP:WJG83201.1;Name=WJG83201.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=PUW38_08400;product=DNA replication terminus site-binding protein;protein_id=WJG83201.1;transl_table=11 CP118116.1 Genbank gene 1723644 1725047 . - . ID=gene-PUW38_08405;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=PUW38_08405 CP118116.1 Protein Homology CDS 1723644 1725047 . - 0 ID=cds-WJG82632.1;Parent=gene-PUW38_08405;Dbxref=NCBI_GP:WJG82632.1;Name=WJG82632.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=PUW38_08405;product=class II fumarate hydratase;protein_id=WJG82632.1;transl_table=11 CP118116.1 Genbank gene 1725215 1726861 . - . ID=gene-PUW38_08410;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=PUW38_08410 CP118116.1 Protein Homology CDS 1725215 1726861 . - 0 ID=cds-WJG82633.1;Parent=gene-PUW38_08410;Dbxref=NCBI_GP:WJG82633.1;Name=WJG82633.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=PUW38_08410;product=class I fumarate hydratase;protein_id=WJG82633.1;transl_table=11 CP118116.1 Genbank gene 1727061 1728236 . + . ID=gene-PUW38_08415;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=PUW38_08415 CP118116.1 Protein Homology CDS 1727061 1728236 . + 0 ID=cds-WJG82634.1;Parent=gene-PUW38_08415;Dbxref=NCBI_GP:WJG82634.1;Name=WJG82634.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=PUW38_08415;product=mannose-6-phosphate isomerase;protein_id=WJG82634.1;transl_table=11 CP118116.1 Genbank gene 1728339 1729847 . + . ID=gene-PUW38_08420;Name=PUW38_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08420 CP118116.1 Protein Homology CDS 1728339 1729847 . + 0 ID=cds-WJG82635.1;Parent=gene-PUW38_08420;Dbxref=NCBI_GP:WJG82635.1;Name=WJG82635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=PUW38_08420;product=YdgA family protein;protein_id=WJG82635.1;transl_table=11 CP118116.1 Genbank pseudogene 1729966 1730186 . + . ID=gene-PUW38_08425;Name=PUW38_08425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08425;pseudo=true CP118116.1 Protein Homology CDS 1729966 1730186 . + 0 ID=cds-PUW38_08425;Parent=gene-PUW38_08425;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=PUW38_08425;product=glucose PTS transporter subunit EIIB;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1730196 1730327 . + . ID=gene-PUW38_08430;Name=PUW38_08430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08430;pseudo=true CP118116.1 Protein Homology CDS 1730196 1730327 . + 0 ID=cds-PUW38_08430;Parent=gene-PUW38_08430;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=PUW38_08430;product=transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1730552 1731553 . + . ID=gene-PUW38_08435;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=PUW38_08435 CP118116.1 Protein Homology CDS 1730552 1731553 . + 0 ID=cds-WJG82636.1;Parent=gene-PUW38_08435;Dbxref=NCBI_GP:WJG82636.1;Name=WJG82636.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=PUW38_08435;product=adenosine deaminase;protein_id=WJG82636.1;transl_table=11 CP118116.1 Genbank gene 1731628 1732668 . - . ID=gene-PUW38_08440;Name=PUW38_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08440 CP118116.1 Protein Homology CDS 1731628 1732668 . - 0 ID=cds-WJG82637.1;Parent=gene-PUW38_08440;Dbxref=NCBI_GP:WJG82637.1;Name=WJG82637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=PUW38_08440;product=oxidoreductase;protein_id=WJG82637.1;transl_table=11 CP118116.1 Genbank gene 1732876 1733001 . + . ID=gene-PUW38_08445;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=PUW38_08445 CP118116.1 Protein Homology CDS 1732876 1733001 . + 0 ID=cds-WJG82638.1;Parent=gene-PUW38_08445;Dbxref=NCBI_GP:WJG82638.1;Name=WJG82638.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=PUW38_08445;product=division septum protein Blr;protein_id=WJG82638.1;transl_table=11 CP118116.1 Genbank gene 1733299 1733514 . + . ID=gene-PUW38_08450;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=PUW38_08450 CP118116.1 Protein Homology CDS 1733299 1733514 . + 0 ID=cds-WJG82639.1;Parent=gene-PUW38_08450;Dbxref=NCBI_GP:WJG82639.1;Name=WJG82639.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=PUW38_08450;product=transcription modulator YdgT;protein_id=WJG82639.1;transl_table=11 CP118116.1 Genbank gene 1733603 1734043 . + . ID=gene-PUW38_08455;Name=PUW38_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08455 CP118116.1 Protein Homology CDS 1733603 1734043 . + 0 ID=cds-WJG82640.1;Parent=gene-PUW38_08455;Dbxref=NCBI_GP:WJG82640.1;Name=WJG82640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=PUW38_08455;product=DUF2569 domain-containing protein;protein_id=WJG82640.1;transl_table=11 CP118116.1 Genbank gene 1734120 1734701 . + . ID=gene-PUW38_08460;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=PUW38_08460 CP118116.1 Protein Homology CDS 1734120 1734701 . + 0 ID=cds-WJG82641.1;Parent=gene-PUW38_08460;Dbxref=NCBI_GP:WJG82641.1;Name=WJG82641.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=PUW38_08460;product=electron transport complex subunit RsxA;protein_id=WJG82641.1;transl_table=11 CP118116.1 Genbank gene 1734701 1735279 . + . ID=gene-PUW38_08465;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=PUW38_08465 CP118116.1 Protein Homology CDS 1734701 1735279 . + 0 ID=cds-WJG82642.1;Parent=gene-PUW38_08465;Dbxref=NCBI_GP:WJG82642.1;Name=WJG82642.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=PUW38_08465;product=electron transport complex subunit RsxB;protein_id=WJG82642.1;transl_table=11 CP118116.1 Genbank gene 1735272 1737293 . + . ID=gene-PUW38_08470;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=PUW38_08470 CP118116.1 Protein Homology CDS 1735272 1737293 . + 0 ID=cds-WJG82643.1;Parent=gene-PUW38_08470;Dbxref=NCBI_GP:WJG82643.1;Name=WJG82643.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=PUW38_08470;product=electron transport complex subunit RsxC;protein_id=WJG82643.1;transl_table=11 CP118116.1 Genbank gene 1737294 1738352 . + . ID=gene-PUW38_08475;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=PUW38_08475 CP118116.1 Protein Homology CDS 1737294 1738352 . + 0 ID=cds-WJG82644.1;Parent=gene-PUW38_08475;Dbxref=NCBI_GP:WJG82644.1;Name=WJG82644.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=PUW38_08475;product=electron transport complex subunit RsxD;protein_id=WJG82644.1;transl_table=11 CP118116.1 Genbank gene 1738356 1738976 . + . ID=gene-PUW38_08480;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=PUW38_08480 CP118116.1 Protein Homology CDS 1738356 1738976 . + 0 ID=cds-WJG82645.1;Parent=gene-PUW38_08480;Dbxref=NCBI_GP:WJG82645.1;Name=WJG82645.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=PUW38_08480;product=electron transport complex subunit RsxG;protein_id=WJG82645.1;transl_table=11 CP118116.1 Genbank gene 1738979 1739671 . + . ID=gene-PUW38_08485;Name=PUW38_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08485 CP118116.1 Protein Homology CDS 1738979 1739671 . + 0 ID=cds-WJG82646.1;Parent=gene-PUW38_08485;Dbxref=NCBI_GP:WJG82646.1;Name=WJG82646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=PUW38_08485;product=electron transport complex subunit E;protein_id=WJG82646.1;transl_table=11 CP118116.1 Genbank gene 1739671 1740306 . + . ID=gene-PUW38_08490;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=PUW38_08490 CP118116.1 Protein Homology CDS 1739671 1740306 . + 0 ID=cds-WJG82647.1;Parent=gene-PUW38_08490;Dbxref=NCBI_GP:WJG82647.1;Name=WJG82647.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=PUW38_08490;product=endonuclease III;protein_id=WJG82647.1;transl_table=11 CP118116.1 Genbank pseudogene 1740907 1742411 . + . ID=gene-PUW38_08495;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=pseudogene;locus_tag=PUW38_08495;pseudo=true CP118116.1 Protein Homology CDS 1740907 1742411 . + 0 ID=cds-PUW38_08495;Parent=gene-PUW38_08495;Note=frameshifted;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=PUW38_08495;product=dipeptide/tripeptide permease DtpA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1742515 1743120 . + . ID=gene-PUW38_08500;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=PUW38_08500 CP118116.1 Protein Homology CDS 1742515 1743120 . + 0 ID=cds-WJG82648.1;Parent=gene-PUW38_08500;Dbxref=NCBI_GP:WJG82648.1;Name=WJG82648.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=PUW38_08500;product=glutathione transferase GstA;protein_id=WJG82648.1;transl_table=11 CP118116.1 Genbank gene 1743179 1744039 . - . ID=gene-PUW38_08505;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=PUW38_08505 CP118116.1 Protein Homology CDS 1743179 1744039 . - 0 ID=cds-WJG82649.1;Parent=gene-PUW38_08505;Dbxref=NCBI_GP:WJG82649.1;Name=WJG82649.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=PUW38_08505;product=pyridoxal kinase PdxY;protein_id=WJG82649.1;transl_table=11 CP118116.1 Genbank gene 1744098 1745372 . - . ID=gene-PUW38_08510;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=PUW38_08510 CP118116.1 Protein Homology CDS 1744098 1745372 . - 0 ID=cds-WJG82650.1;Parent=gene-PUW38_08510;Dbxref=NCBI_GP:WJG82650.1;Name=WJG82650.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=PUW38_08510;product=tyrosine--tRNA ligase;protein_id=WJG82650.1;transl_table=11 CP118116.1 Genbank gene 1745499 1746155 . - . ID=gene-PUW38_08515;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=PUW38_08515 CP118116.1 Protein Homology CDS 1745499 1746155 . - 0 ID=cds-WJG82651.1;Parent=gene-PUW38_08515;Dbxref=NCBI_GP:WJG82651.1;Name=WJG82651.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=PUW38_08515;product=pyridoxamine 5'-phosphate oxidase;protein_id=WJG82651.1;transl_table=11 CP118116.1 Genbank gene 1746214 1746543 . - . ID=gene-PUW38_08520;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=PUW38_08520 CP118116.1 Protein Homology CDS 1746214 1746543 . - 0 ID=cds-WJG82652.1;Parent=gene-PUW38_08520;Dbxref=NCBI_GP:WJG82652.1;Name=WJG82652.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=PUW38_08520;product=C-type lysozyme inhibitor;protein_id=WJG82652.1;transl_table=11 CP118116.1 Genbank gene 1746631 1747752 . - . ID=gene-PUW38_08525;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=PUW38_08525 CP118116.1 Protein Homology CDS 1746631 1747752 . - 0 ID=cds-WJG82653.1;Parent=gene-PUW38_08525;Dbxref=NCBI_GP:WJG82653.1;Name=WJG82653.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=PUW38_08525;product=anhydro-N-acetylmuramic acid kinase;protein_id=WJG82653.1;transl_table=11 CP118116.1 Genbank gene 1748024 1748491 . + . ID=gene-PUW38_08530;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=PUW38_08530 CP118116.1 Protein Homology CDS 1748024 1748491 . + 0 ID=cds-WJG82654.1;Parent=gene-PUW38_08530;Dbxref=NCBI_GP:WJG82654.1;Name=WJG82654.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=PUW38_08530;product=outer membrane lipoprotein SlyB;protein_id=WJG82654.1;transl_table=11 CP118116.1 Genbank gene 1748539 1748979 . - . ID=gene-PUW38_08535;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=PUW38_08535 CP118116.1 Protein Homology CDS 1748539 1748979 . - 0 ID=cds-WJG82655.1;Parent=gene-PUW38_08535;Dbxref=NCBI_GP:WJG82655.1;Name=WJG82655.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=PUW38_08535;product=transcriptional regulator SlyA;protein_id=WJG82655.1;transl_table=11 CP118116.1 Genbank gene 1749174 1749410 . + . ID=gene-PUW38_08540;Name=PUW38_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08540 CP118116.1 Protein Homology CDS 1749174 1749410 . + 0 ID=cds-WJG82656.1;Parent=gene-PUW38_08540;Dbxref=NCBI_GP:WJG82656.1;Name=WJG82656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=PUW38_08540;product=DUF1656 domain-containing protein;protein_id=WJG82656.1;transl_table=11 CP118116.1 Genbank gene 1749413 1750273 . + . ID=gene-PUW38_08545;Name=PUW38_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08545 CP118116.1 Protein Homology CDS 1749413 1750273 . + 0 ID=cds-WJG82657.1;Parent=gene-PUW38_08545;Dbxref=NCBI_GP:WJG82657.1;Name=WJG82657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=PUW38_08545;product=HlyD family secretion protein;protein_id=WJG82657.1;transl_table=11 CP118116.1 Genbank gene 1750273 1752312 . + . ID=gene-PUW38_08550;Name=PUW38_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08550 CP118116.1 Protein Homology CDS 1750273 1752312 . + 0 ID=cds-WJG82658.1;Parent=gene-PUW38_08550;Dbxref=NCBI_GP:WJG82658.1;Name=WJG82658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=PUW38_08550;product=FUSC family protein;protein_id=WJG82658.1;transl_table=11 CP118116.1 Genbank gene 1752288 1752809 . - . ID=gene-PUW38_08555;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=PUW38_08555 CP118116.1 Protein Homology CDS 1752288 1752809 . - 0 ID=cds-WJG82659.1;Parent=gene-PUW38_08555;Dbxref=NCBI_GP:WJG82659.1;Name=WJG82659.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=PUW38_08555;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WJG82659.1;transl_table=11 CP118116.1 Genbank pseudogene 1752889 1753785 . - . ID=gene-PUW38_08560;Name=PUW38_08560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08560;pseudo=true CP118116.1 Protein Homology CDS 1752889 1753785 . - 0 ID=cds-PUW38_08560;Parent=gene-PUW38_08560;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=PUW38_08560;product=aldo/keto reductase family oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1753836 1754075 . - . ID=gene-PUW38_08565;Name=PUW38_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08565 CP118116.1 Protein Homology CDS 1753836 1754075 . - 0 ID=cds-WJG82660.1;Parent=gene-PUW38_08565;Dbxref=NCBI_GP:WJG82660.1;Name=WJG82660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=PUW38_08565;product=DUF1289 domain-containing protein;protein_id=WJG82660.1;transl_table=11 CP118116.1 Genbank gene 1754178 1754777 . + . ID=gene-PUW38_08570;Name=PUW38_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08570 CP118116.1 Protein Homology CDS 1754178 1754777 . + 0 ID=cds-WJG82661.1;Parent=gene-PUW38_08570;Dbxref=NCBI_GP:WJG82661.1;Name=WJG82661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=PUW38_08570;product=TetR/AcrR family transcriptional regulator;protein_id=WJG82661.1;transl_table=11 CP118116.1 Genbank pseudogene 1754836 1755932 . + . ID=gene-PUW38_08575;Name=PUW38_08575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08575;pseudo=true CP118116.1 Protein Homology CDS 1754836 1755932 . + 0 ID=cds-PUW38_08575;Parent=gene-PUW38_08575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=PUW38_08575;product=alkene reductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1756001 1756408 . + . ID=gene-PUW38_08580;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=PUW38_08580 CP118116.1 Protein Homology CDS 1756001 1756408 . + 0 ID=cds-WJG82662.1;Parent=gene-PUW38_08580;Dbxref=NCBI_GP:WJG82662.1;Name=WJG82662.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=PUW38_08580;product=lactoylglutathione lyase;protein_id=WJG82662.1;transl_table=11 CP118116.1 Genbank pseudogene 1756509 1757155 . + . ID=gene-PUW38_08585;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=pseudogene;locus_tag=PUW38_08585;pseudo=true CP118116.1 Protein Homology CDS 1756509 1757155 . + 0 ID=cds-PUW38_08585;Parent=gene-PUW38_08585;Note=frameshifted;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=PUW38_08585;product=ribonuclease T;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1757233 1757580 . - . ID=gene-PUW38_08590;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=PUW38_08590 CP118116.1 Protein Homology CDS 1757233 1757580 . - 0 ID=cds-WJG82663.1;Parent=gene-PUW38_08590;Dbxref=NCBI_GP:WJG82663.1;Name=WJG82663.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=PUW38_08590;product=monothiol glutaredoxin 4;protein_id=WJG82663.1;transl_table=11 CP118116.1 Genbank gene 1757916 1758737 . + . ID=gene-PUW38_08595;Name=PUW38_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08595 CP118116.1 Protein Homology CDS 1757916 1758737 . + 0 ID=cds-WJG82664.1;Parent=gene-PUW38_08595;Dbxref=NCBI_GP:WJG82664.1;Name=WJG82664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=PUW38_08595;product=C40 family peptidase;protein_id=WJG82664.1;transl_table=11 CP118116.1 Genbank gene 1758864 1759445 . + . ID=gene-PUW38_08600;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=PUW38_08600 CP118116.1 Protein Homology CDS 1758864 1759445 . + 0 ID=cds-WJG82665.1;Parent=gene-PUW38_08600;Dbxref=NCBI_GP:WJG82665.1;Name=WJG82665.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=PUW38_08600;product=superoxide dismutase [Fe];protein_id=WJG82665.1;transl_table=11 CP118116.1 Genbank gene 1759528 1759617 . - . ID=gene-PUW38_08605;Name=PUW38_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08605 CP118116.1 Protein Homology CDS 1759528 1759617 . - 0 ID=cds-WJG82666.1;Parent=gene-PUW38_08605;Dbxref=NCBI_GP:WJG82666.1;Name=WJG82666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=PUW38_08605;product=YnhF family membrane protein;protein_id=WJG82666.1;transl_table=11 CP118116.1 Genbank gene 1759913 1760938 . + . ID=gene-PUW38_08610;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=PUW38_08610 CP118116.1 Protein Homology CDS 1759913 1760938 . + 0 ID=cds-WJG82667.1;Parent=gene-PUW38_08610;Dbxref=NCBI_GP:WJG82667.1;Name=WJG82667.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=PUW38_08610;product=HTH-type transcriptional repressor PurR;protein_id=WJG82667.1;transl_table=11 CP118116.1 Genbank gene 1760935 1761867 . - . ID=gene-PUW38_08615;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=PUW38_08615 CP118116.1 Protein Homology CDS 1760935 1761867 . - 0 ID=cds-WJG82668.1;Parent=gene-PUW38_08615;Dbxref=NCBI_GP:WJG82668.1;Name=WJG82668.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=PUW38_08615;product=DNA-binding transcriptional activator PunR;protein_id=WJG82668.1;transl_table=11 CP118116.1 Genbank pseudogene 1761980 1763184 . + . ID=gene-PUW38_08620;Name=punC;gbkey=Gene;gene=punC;gene_biotype=pseudogene;locus_tag=PUW38_08620;pseudo=true CP118116.1 Protein Homology CDS 1761980 1763184 . + 0 ID=cds-PUW38_08620;Parent=gene-PUW38_08620;Note=frameshifted;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=PUW38_08620;product=purine nucleoside transporter PunC;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1763474 1764622 . + . ID=gene-PUW38_08625;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=PUW38_08625 CP118116.1 Protein Homology CDS 1763474 1764622 . + 0 ID=cds-WJG82669.1;Parent=gene-PUW38_08625;Dbxref=NCBI_GP:WJG82669.1;Name=WJG82669.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=PUW38_08625;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WJG82669.1;transl_table=11 CP118116.1 Genbank gene 1764664 1765305 . - . ID=gene-PUW38_08630;Name=PUW38_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08630 CP118116.1 Protein Homology CDS 1764664 1765305 . - 0 ID=cds-WJG82670.1;Parent=gene-PUW38_08630;Dbxref=NCBI_GP:WJG82670.1;Name=WJG82670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=PUW38_08630;product=riboflavin synthase;protein_id=WJG82670.1;transl_table=11 CP118116.1 Genbank pseudogene 1765522 1766894 . + . ID=gene-PUW38_08635;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=pseudogene;locus_tag=PUW38_08635;pseudo=true CP118116.1 Protein Homology CDS 1765522 1766894 . + 0 ID=cds-PUW38_08635;Parent=gene-PUW38_08635;Note=frameshifted;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=PUW38_08635;product=multidrug efflux MATE transporter MdtK;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1767046 1767122 . + . ID=gene-PUW38_08640;Name=PUW38_08640;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_08640 CP118116.1 tRNAscan-SE tRNA 1767046 1767122 . + . ID=rna-PUW38_08640;Parent=gene-PUW38_08640;anticodon=(pos:1767080..1767082);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_08640;product=tRNA-Val CP118116.1 tRNAscan-SE exon 1767046 1767122 . + . ID=exon-PUW38_08640-1;Parent=rna-PUW38_08640;anticodon=(pos:1767080..1767082);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_08640;product=tRNA-Val CP118116.1 Genbank gene 1767133 1767209 . + . ID=gene-PUW38_08645;Name=PUW38_08645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_08645 CP118116.1 tRNAscan-SE tRNA 1767133 1767209 . + . ID=rna-PUW38_08645;Parent=gene-PUW38_08645;anticodon=(pos:1767167..1767169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_08645;product=tRNA-Val CP118116.1 tRNAscan-SE exon 1767133 1767209 . + . ID=exon-PUW38_08645-1;Parent=rna-PUW38_08645;anticodon=(pos:1767167..1767169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_08645;product=tRNA-Val CP118116.1 Genbank gene 1767367 1768425 . - . ID=gene-PUW38_08650;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=PUW38_08650 CP118116.1 Protein Homology CDS 1767367 1768425 . - 0 ID=cds-WJG82671.1;Parent=gene-PUW38_08650;Dbxref=NCBI_GP:WJG82671.1;Name=WJG82671.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=PUW38_08650;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WJG82671.1;transl_table=11 CP118116.1 Genbank gene 1768422 1769201 . - . ID=gene-PUW38_08655;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=PUW38_08655 CP118116.1 Protein Homology CDS 1768422 1769201 . - 0 ID=cds-WJG82672.1;Parent=gene-PUW38_08655;Dbxref=NCBI_GP:WJG82672.1;Name=WJG82672.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=PUW38_08655;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WJG82672.1;transl_table=11 CP118116.1 Genbank gene 1769202 1769468 . - . ID=gene-PUW38_08660;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=PUW38_08660 CP118116.1 Protein Homology CDS 1769202 1769468 . - 0 ID=cds-WJG82673.1;Parent=gene-PUW38_08660;Dbxref=NCBI_GP:WJG82673.1;Name=WJG82673.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=PUW38_08660;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WJG82673.1;transl_table=11 CP118116.1 Genbank gene 1769465 1770112 . - . ID=gene-PUW38_08665;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=PUW38_08665 CP118116.1 Protein Homology CDS 1769465 1770112 . - 0 ID=cds-WJG82674.1;Parent=gene-PUW38_08665;Dbxref=NCBI_GP:WJG82674.1;Name=WJG82674.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=PUW38_08665;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WJG82674.1;transl_table=11 CP118116.1 Genbank gene 1770180 1771148 . - . ID=gene-PUW38_08670;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=PUW38_08670 CP118116.1 Protein Homology CDS 1770180 1771148 . - 0 ID=cds-WJG82675.1;Parent=gene-PUW38_08670;Dbxref=NCBI_GP:WJG82675.1;Name=WJG82675.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=PUW38_08670;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WJG82675.1;transl_table=11 CP118116.1 Genbank gene 1771129 1771503 . - . ID=gene-PUW38_08675;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=PUW38_08675 CP118116.1 Protein Homology CDS 1771129 1771503 . - 0 ID=cds-WJG82676.1;Parent=gene-PUW38_08675;Dbxref=NCBI_GP:WJG82676.1;Name=WJG82676.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=PUW38_08675;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WJG82676.1;transl_table=11 CP118116.1 Genbank gene 1771484 1771861 . - . ID=gene-PUW38_08680;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=PUW38_08680 CP118116.1 Protein Homology CDS 1771484 1771861 . - 0 ID=cds-WJG83202.1;Parent=gene-PUW38_08680;Dbxref=NCBI_GP:WJG83202.1;Name=WJG83202.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=PUW38_08680;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WJG83202.1;transl_table=11 CP118116.1 Genbank gene 1771864 1773165 . - . ID=gene-PUW38_08685;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=PUW38_08685 CP118116.1 Protein Homology CDS 1771864 1773165 . - 0 ID=cds-WJG82677.1;Parent=gene-PUW38_08685;Dbxref=NCBI_GP:WJG82677.1;Name=WJG82677.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=PUW38_08685;product=SctN family type III secretion system ATPase SsaN;protein_id=WJG82677.1;transl_table=11 CP118116.1 Genbank gene 1773155 1775200 . - . ID=gene-PUW38_08690;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=PUW38_08690 CP118116.1 Protein Homology CDS 1773155 1775200 . - 0 ID=cds-WJG82678.1;Parent=gene-PUW38_08690;Dbxref=NCBI_GP:WJG82678.1;Name=WJG82678.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=PUW38_08690;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WJG82678.1;transl_table=11 CP118116.1 Genbank gene 1775185 1775553 . - . ID=gene-PUW38_08695;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=PUW38_08695 CP118116.1 Protein Homology CDS 1775185 1775553 . - 0 ID=cds-WJG82679.1;Parent=gene-PUW38_08695;Dbxref=NCBI_GP:WJG82679.1;Name=WJG82679.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=PUW38_08695;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WJG82679.1;transl_table=11 CP118116.1 Genbank gene 1775611 1776627 . - . ID=gene-PUW38_08700;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=PUW38_08700 CP118116.1 Protein Homology CDS 1775611 1776627 . - 0 ID=cds-WJG82680.1;Parent=gene-PUW38_08700;Dbxref=NCBI_GP:WJG82680.1;Name=WJG82680.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=PUW38_08700;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WJG82680.1;transl_table=11 CP118116.1 Genbank gene 1776593 1777267 . - . ID=gene-PUW38_08705;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=PUW38_08705 CP118116.1 Protein Homology CDS 1776593 1777267 . - 0 ID=cds-WJG82681.1;Parent=gene-PUW38_08705;Dbxref=NCBI_GP:WJG82681.1;Name=WJG82681.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=PUW38_08705;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WJG82681.1;transl_table=11 CP118116.1 Genbank gene 1777264 1777812 . - . ID=gene-PUW38_08710;Name=PUW38_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08710 CP118116.1 Protein Homology CDS 1777264 1777812 . - 0 ID=cds-WJG83203.1;Parent=gene-PUW38_08710;Dbxref=NCBI_GP:WJG83203.1;Name=WJG83203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=PUW38_08710;product=type III secretion system domain-containing protein;protein_id=WJG83203.1;transl_table=11 CP118116.1 Genbank gene 1777830 1778579 . - . ID=gene-PUW38_08715;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=PUW38_08715 CP118116.1 Protein Homology CDS 1777830 1778579 . - 0 ID=cds-WJG82682.1;Parent=gene-PUW38_08715;Dbxref=NCBI_GP:WJG82682.1;Name=WJG82682.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=PUW38_08715;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WJG82682.1;transl_table=11 CP118116.1 Genbank gene 1778576 1778824 . - . ID=gene-PUW38_08720;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=PUW38_08720 CP118116.1 Protein Homology CDS 1778576 1778824 . - 0 ID=cds-WJG83204.1;Parent=gene-PUW38_08720;Dbxref=NCBI_GP:WJG83204.1;Name=WJG83204.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460373.1;locus_tag=PUW38_08720;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WJG83204.1;transl_table=11 CP118116.1 Genbank gene 1778836 1779126 . - . ID=gene-PUW38_08725;Name=PUW38_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08725 CP118116.1 Protein Homology CDS 1778836 1779126 . - 0 ID=cds-WJG82683.1;Parent=gene-PUW38_08725;Dbxref=NCBI_GP:WJG82683.1;Name=WJG82683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=PUW38_08725;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WJG82683.1;transl_table=11 CP118116.1 Genbank gene 1779104 1779319 . - . ID=gene-PUW38_08730;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=PUW38_08730 CP118116.1 Protein Homology CDS 1779104 1779319 . - 0 ID=cds-WJG82684.1;Parent=gene-PUW38_08730;Dbxref=NCBI_GP:WJG82684.1;Name=WJG82684.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=PUW38_08730;product=type III secretion system needle filament protein SsaG;protein_id=WJG82684.1;transl_table=11 CP118116.1 Genbank gene 1779413 1780102 . - . ID=gene-PUW38_08735;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=PUW38_08735 CP118116.1 Protein Homology CDS 1779413 1780102 . - 0 ID=cds-WJG82685.1;Parent=gene-PUW38_08735;Dbxref=NCBI_GP:WJG82685.1;Name=WJG82685.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=PUW38_08735;product=pathogenicity island 2 effector protein SseG;protein_id=WJG82685.1;transl_table=11 CP118116.1 Genbank gene 1780099 1780881 . - . ID=gene-PUW38_08740;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=PUW38_08740 CP118116.1 Protein Homology CDS 1780099 1780881 . - 0 ID=cds-WJG82686.1;Parent=gene-PUW38_08740;Dbxref=NCBI_GP:WJG82686.1;Name=WJG82686.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=PUW38_08740;product=type III secretion systems effector SseF;protein_id=WJG82686.1;transl_table=11 CP118116.1 Genbank gene 1780897 1781331 . - . ID=gene-PUW38_08745;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=PUW38_08745 CP118116.1 Protein Homology CDS 1780897 1781331 . - 0 ID=cds-WJG82687.1;Parent=gene-PUW38_08745;Dbxref=NCBI_GP:WJG82687.1;Name=WJG82687.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=PUW38_08745;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WJG82687.1;transl_table=11 CP118116.1 Genbank gene 1781383 1781799 . - . ID=gene-PUW38_08750;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=PUW38_08750 CP118116.1 Protein Homology CDS 1781383 1781799 . - 0 ID=cds-WJG82688.1;Parent=gene-PUW38_08750;Dbxref=NCBI_GP:WJG82688.1;Name=WJG82688.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=PUW38_08750;product=LcrR family type III secretion system chaperone SseE;protein_id=WJG82688.1;transl_table=11 CP118116.1 Genbank gene 1781802 1782389 . - . ID=gene-PUW38_08755;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=PUW38_08755 CP118116.1 Protein Homology CDS 1781802 1782389 . - 0 ID=cds-WJG82689.1;Parent=gene-PUW38_08755;Dbxref=NCBI_GP:WJG82689.1;Name=WJG82689.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=PUW38_08755;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WJG82689.1;transl_table=11 CP118116.1 Genbank gene 1782405 1783859 . - . ID=gene-PUW38_08760;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=PUW38_08760 CP118116.1 Protein Homology CDS 1782405 1783859 . - 0 ID=cds-WJG82690.1;Parent=gene-PUW38_08760;Dbxref=NCBI_GP:WJG82690.1;Name=WJG82690.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=PUW38_08760;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WJG82690.1;transl_table=11 CP118116.1 Genbank gene 1783862 1784335 . - . ID=gene-PUW38_08765;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=PUW38_08765 CP118116.1 Protein Homology CDS 1783862 1784335 . - 0 ID=cds-WJG82691.1;Parent=gene-PUW38_08765;Dbxref=NCBI_GP:WJG82691.1;Name=WJG82691.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=PUW38_08765;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WJG82691.1;transl_table=11 CP118116.1 Genbank gene 1784332 1784922 . - . ID=gene-PUW38_08770;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=PUW38_08770 CP118116.1 Protein Homology CDS 1784332 1784922 . - 0 ID=cds-WJG82692.1;Parent=gene-PUW38_08770;Dbxref=NCBI_GP:WJG82692.1;Name=WJG82692.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=PUW38_08770;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WJG82692.1;transl_table=11 CP118116.1 Genbank gene 1784929 1785255 . - . ID=gene-PUW38_08775;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PUW38_08775 CP118116.1 Protein Homology CDS 1784929 1785255 . - 0 ID=cds-WJG83205.1;Parent=gene-PUW38_08775;Dbxref=NCBI_GP:WJG83205.1;Name=WJG83205.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=PUW38_08775;product=SPI-2 type III secretion system chaperone SseA;protein_id=WJG83205.1;transl_table=11 CP118116.1 Genbank gene 1785458 1785700 . - . ID=gene-PUW38_08780;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=PUW38_08780 CP118116.1 Protein Homology CDS 1785458 1785700 . - 0 ID=cds-WJG82693.1;Parent=gene-PUW38_08780;Dbxref=NCBI_GP:WJG82693.1;Name=WJG82693.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=PUW38_08780;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WJG82693.1;transl_table=11 CP118116.1 Genbank gene 1785708 1786919 . - . ID=gene-PUW38_08785;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=PUW38_08785 CP118116.1 Protein Homology CDS 1785708 1786919 . - 0 ID=cds-WJG82694.1;Parent=gene-PUW38_08785;Dbxref=NCBI_GP:WJG82694.1;Name=WJG82694.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=PUW38_08785;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WJG82694.1;transl_table=11 CP118116.1 Genbank gene 1786900 1788393 . - . ID=gene-PUW38_08790;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=PUW38_08790 CP118116.1 Protein Homology CDS 1786900 1788393 . - 0 ID=cds-WJG82695.1;Parent=gene-PUW38_08790;Dbxref=NCBI_GP:WJG82695.1;Name=WJG82695.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=PUW38_08790;product=SPI-2 type III secretion system protein SpiA;protein_id=WJG82695.1;transl_table=11 CP118116.1 Genbank gene 1788395 1788796 . - . ID=gene-PUW38_08795;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=PUW38_08795 CP118116.1 Protein Homology CDS 1788395 1788796 . - 0 ID=cds-WJG82696.1;Parent=gene-PUW38_08795;Dbxref=NCBI_GP:WJG82696.1;Name=WJG82696.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=PUW38_08795;product=SPI-2 type III secretion system protein SpiC;protein_id=WJG82696.1;transl_table=11 CP118116.1 Genbank gene 1789197 1791959 . + . ID=gene-PUW38_08800;Name=PUW38_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08800 CP118116.1 Protein Homology CDS 1789197 1791959 . + 0 ID=cds-WJG82697.1;Parent=gene-PUW38_08800;Dbxref=NCBI_GP:WJG82697.1;Name=WJG82697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=PUW38_08800;product=two component system sensor kinase;protein_id=WJG82697.1;transl_table=11 CP118116.1 Genbank gene 1791990 1792628 . + . ID=gene-PUW38_08805;Name=PUW38_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08805 CP118116.1 Protein Homology CDS 1791990 1792628 . + 0 ID=cds-WJG82698.1;Parent=gene-PUW38_08805;Dbxref=NCBI_GP:WJG82698.1;Name=WJG82698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=PUW38_08805;product=two component system response regulator;protein_id=WJG82698.1;transl_table=11 CP118116.1 Genbank gene 1792807 1793535 . + . ID=gene-PUW38_08810;Name=PUW38_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08810 CP118116.1 Protein Homology CDS 1792807 1793535 . + 0 ID=cds-WJG82699.1;Parent=gene-PUW38_08810;Dbxref=NCBI_GP:WJG82699.1;Name=WJG82699.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=PUW38_08810;product=MerR family transcriptional regulator;protein_id=WJG82699.1;transl_table=11 CP118116.1 Genbank gene 1793708 1794667 . + . ID=gene-PUW38_08815;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=PUW38_08815 CP118116.1 Protein Homology CDS 1793708 1794667 . + 0 ID=cds-WJG82700.1;Parent=gene-PUW38_08815;Dbxref=NCBI_GP:WJG82700.1;Name=WJG82700.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=PUW38_08815;product=transcriptional regulator MlrB;protein_id=WJG82700.1;transl_table=11 CP118116.1 Genbank gene 1794789 1795001 . - . ID=gene-PUW38_08820;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=PUW38_08820 CP118116.1 Protein Homology CDS 1794789 1795001 . - 0 ID=cds-WJG82701.1;Parent=gene-PUW38_08820;Dbxref=NCBI_GP:WJG82701.1;Name=WJG82701.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=PUW38_08820;product=fumarate hydratase FumD;protein_id=WJG82701.1;transl_table=11 CP118116.1 Genbank gene 1795099 1795719 . - . ID=gene-PUW38_08825;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=PUW38_08825 CP118116.1 Protein Homology CDS 1795099 1795719 . - 0 ID=cds-WJG82702.1;Parent=gene-PUW38_08825;Dbxref=NCBI_GP:WJG82702.1;Name=WJG82702.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=PUW38_08825;product=tetrathionate respiration response regulator TtrR;protein_id=WJG82702.1;transl_table=11 CP118116.1 Genbank gene 1795694 1797472 . - . ID=gene-PUW38_08830;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=PUW38_08830 CP118116.1 Protein Homology CDS 1795694 1797472 . - 0 ID=cds-WJG82703.1;Parent=gene-PUW38_08830;Dbxref=NCBI_GP:WJG82703.1;Name=WJG82703.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=PUW38_08830;product=tetrathionate respiration histidine kinase TtrS;protein_id=WJG82703.1;transl_table=11 CP118116.1 Genbank pseudogene 1797636 1798389 . + . ID=gene-PUW38_08835;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=pseudogene;locus_tag=PUW38_08835;pseudo=true CP118116.1 Protein Homology CDS 1797636 1798389 . + 0 ID=cds-PUW38_08835;Parent=gene-PUW38_08835;Note=frameshifted;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460350.1;locus_tag=PUW38_08835;product=tetrathionate reductase subunit TtrB;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1798390 1799407 . + . ID=gene-PUW38_08840;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=pseudogene;locus_tag=PUW38_08840;pseudo=true CP118116.1 Protein Homology CDS 1798390 1799407 . + 0 ID=cds-PUW38_08840;Parent=gene-PUW38_08840;Note=frameshifted;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=PUW38_08840;product=tetrathionate reductase subunit TtrC;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1799400 1802462 . + . ID=gene-PUW38_08845;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=PUW38_08845 CP118116.1 Protein Homology CDS 1799400 1802462 . + 0 ID=cds-WJG82704.1;Parent=gene-PUW38_08845;Dbxref=NCBI_GP:WJG82704.1;Name=WJG82704.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=PUW38_08845;product=tetrathionate reductase subunit TtrA;protein_id=WJG82704.1;transl_table=11 CP118116.1 Genbank gene 1802785 1804011 . + . ID=gene-PUW38_08850;Name=PUW38_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08850 CP118116.1 Protein Homology CDS 1802785 1804011 . + 0 ID=cds-WJG82705.1;Parent=gene-PUW38_08850;Dbxref=NCBI_GP:WJG82705.1;Name=WJG82705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=PUW38_08850;product=PfkB family carbohydrate kinase;protein_id=WJG82705.1;transl_table=11 CP118116.1 Genbank pseudogene 1804023 1804760 . + . ID=gene-PUW38_08855;Name=PUW38_08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08855;pseudo=true CP118116.1 Protein Homology CDS 1804023 1804760 . + 0 ID=cds-PUW38_08855;Parent=gene-PUW38_08855;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=PUW38_08855;product=glutamine amidotransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1804820 1805713 . + . ID=gene-PUW38_08860;Name=PUW38_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08860 CP118116.1 Protein Homology CDS 1804820 1805713 . + 0 ID=cds-WJG82706.1;Parent=gene-PUW38_08860;Dbxref=NCBI_GP:WJG82706.1;Name=WJG82706.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=PUW38_08860;product=proline iminopeptidase-family hydrolase;protein_id=WJG82706.1;transl_table=11 CP118116.1 Genbank gene 1805735 1807078 . + . ID=gene-PUW38_08865;Name=PUW38_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08865 CP118116.1 Protein Homology CDS 1805735 1807078 . + 0 ID=cds-WJG82707.1;Parent=gene-PUW38_08865;Dbxref=NCBI_GP:WJG82707.1;Name=WJG82707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=PUW38_08865;product=APC family permease;protein_id=WJG82707.1;transl_table=11 CP118116.1 Genbank pseudogene 1807480 1808891 . + . ID=gene-PUW38_08870;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=pseudogene;locus_tag=PUW38_08870;pseudo=true CP118116.1 Protein Homology CDS 1807480 1808891 . + 0 ID=cds-PUW38_08870;Parent=gene-PUW38_08870;Note=frameshifted;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=PUW38_08870;product=pyruvate kinase PykF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1809201 1809437 . + . ID=gene-PUW38_08875;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=PUW38_08875 CP118116.1 Protein Homology CDS 1809201 1809437 . + 0 ID=cds-WJG82708.1;Parent=gene-PUW38_08875;Dbxref=NCBI_GP:WJG82708.1;Name=WJG82708.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=PUW38_08875;product=murein lipoprotein Lpp;protein_id=WJG82708.1;transl_table=11 CP118116.1 Genbank gene 1809520 1809762 . + . ID=gene-PUW38_08880;Name=PUW38_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08880 CP118116.1 Protein Homology CDS 1809520 1809762 . + 0 ID=cds-WJG83206.1;Parent=gene-PUW38_08880;Dbxref=NCBI_GP:WJG83206.1;Name=WJG83206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082333.1;locus_tag=PUW38_08880;product=major outer membrane lipoprotein;protein_id=WJG83206.1;transl_table=11 CP118116.1 Genbank pseudogene 1809828 1810829 . - . ID=gene-PUW38_08885;Name=PUW38_08885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08885;pseudo=true CP118116.1 Protein Homology CDS 1809828 1810829 . - 0 ID=cds-PUW38_08885;Parent=gene-PUW38_08885;Note=internal stop;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=PUW38_08885;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1810984 1811400 . - . ID=gene-PUW38_08890;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=PUW38_08890 CP118116.1 Protein Homology CDS 1810984 1811400 . - 0 ID=cds-WJG82709.1;Parent=gene-PUW38_08890;Dbxref=NCBI_GP:WJG82709.1;Name=WJG82709.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=PUW38_08890;product=cysteine desulfuration protein SufE;protein_id=WJG82709.1;transl_table=11 CP118116.1 Genbank gene 1811413 1812633 . - . ID=gene-PUW38_08895;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=PUW38_08895 CP118116.1 Protein Homology CDS 1811413 1812633 . - 0 ID=cds-WJG82710.1;Parent=gene-PUW38_08895;Dbxref=NCBI_GP:WJG82710.1;Name=WJG82710.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=PUW38_08895;product=cysteine desulfurase SufS;protein_id=WJG82710.1;transl_table=11 CP118116.1 Genbank gene 1812630 1813901 . - . ID=gene-PUW38_08900;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=PUW38_08900 CP118116.1 Protein Homology CDS 1812630 1813901 . - 0 ID=cds-WJG82711.1;Parent=gene-PUW38_08900;Dbxref=NCBI_GP:WJG82711.1;Name=WJG82711.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=PUW38_08900;product=Fe-S cluster assembly protein SufD;protein_id=WJG82711.1;transl_table=11 CP118116.1 Genbank gene 1813876 1814622 . - . ID=gene-PUW38_08905;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=PUW38_08905 CP118116.1 Protein Homology CDS 1813876 1814622 . - 0 ID=cds-WJG82712.1;Parent=gene-PUW38_08905;Dbxref=NCBI_GP:WJG82712.1;Name=WJG82712.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=PUW38_08905;product=Fe-S cluster assembly ATPase SufC;protein_id=WJG82712.1;transl_table=11 CP118116.1 Genbank gene 1814639 1816126 . - . ID=gene-PUW38_08910;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=PUW38_08910 CP118116.1 Protein Homology CDS 1814639 1816126 . - 0 ID=cds-WJG82713.1;Parent=gene-PUW38_08910;Dbxref=NCBI_GP:WJG82713.1;Name=WJG82713.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=PUW38_08910;product=Fe-S cluster assembly protein SufB;protein_id=WJG82713.1;transl_table=11 CP118116.1 Genbank gene 1816135 1816503 . - . ID=gene-PUW38_08915;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=PUW38_08915 CP118116.1 Protein Homology CDS 1816135 1816503 . - 0 ID=cds-WJG82714.1;Parent=gene-PUW38_08915;Dbxref=NCBI_GP:WJG82714.1;Name=WJG82714.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=PUW38_08915;product=Fe-S cluster assembly scaffold SufA;protein_id=WJG82714.1;transl_table=11 CP118116.1 Genbank gene 1816930 1818276 . + . ID=gene-PUW38_08920;Name=PUW38_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08920 CP118116.1 Protein Homology CDS 1816930 1818276 . + 0 ID=cds-WJG82715.1;Parent=gene-PUW38_08920;Dbxref=NCBI_GP:WJG82715.1;Name=WJG82715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=PUW38_08920;product=L-cystine transporter;protein_id=WJG82715.1;transl_table=11 CP118116.1 Genbank gene 1818564 1818752 . - . ID=gene-PUW38_08925;Name=PUW38_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08925 CP118116.1 Protein Homology CDS 1818564 1818752 . - 0 ID=cds-WJG82716.1;Parent=gene-PUW38_08925;Dbxref=NCBI_GP:WJG82716.1;Name=WJG82716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=PUW38_08925;product=YdiH family protein;protein_id=WJG82716.1;transl_table=11 CP118116.1 Genbank gene 1818851 1819261 . - . ID=gene-PUW38_08930;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=PUW38_08930 CP118116.1 Protein Homology CDS 1818851 1819261 . - 0 ID=cds-WJG82717.1;Parent=gene-PUW38_08930;Dbxref=NCBI_GP:WJG82717.1;Name=WJG82717.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=PUW38_08930;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WJG82717.1;transl_table=11 CP118116.1 Genbank gene 1819258 1822314 . - . ID=gene-PUW38_08935;Name=PUW38_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08935 CP118116.1 Protein Homology CDS 1819258 1822314 . - 0 ID=cds-WJG82718.1;Parent=gene-PUW38_08935;Dbxref=NCBI_GP:WJG82718.1;Name=WJG82718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=PUW38_08935;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WJG82718.1;transl_table=11 CP118116.1 Genbank gene 1822579 1823697 . + . ID=gene-PUW38_08940;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=PUW38_08940 CP118116.1 Protein Homology CDS 1822579 1823697 . + 0 ID=cds-WJG82719.1;Parent=gene-PUW38_08940;Dbxref=NCBI_GP:WJG82719.1;Name=WJG82719.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=PUW38_08940;product=AI-2E family transporter YdiK;protein_id=WJG82719.1;transl_table=11 CP118116.1 Genbank gene 1823880 1823987 . + . ID=gene-PUW38_08945;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=PUW38_08945 CP118116.1 cmsearch antisense_RNA 1823880 1823987 . + . ID=rna-PUW38_08945;Parent=gene-PUW38_08945;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_08945;product=antisense sRNA RprA CP118116.1 cmsearch exon 1823880 1823987 . + . ID=exon-PUW38_08945-1;Parent=rna-PUW38_08945;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_08945;product=antisense sRNA RprA CP118116.1 Genbank gene 1824155 1824514 . + . ID=gene-PUW38_08950;Name=PUW38_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08950 CP118116.1 Protein Homology CDS 1824155 1824514 . + 0 ID=cds-WJG82720.1;Parent=gene-PUW38_08950;Dbxref=NCBI_GP:WJG82720.1;Name=WJG82720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=PUW38_08950;product=YdiL family protein;protein_id=WJG82720.1;transl_table=11 CP118116.1 Genbank gene 1824655 1825866 . + . ID=gene-PUW38_08955;Name=PUW38_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08955 CP118116.1 Protein Homology CDS 1824655 1825866 . + 0 ID=cds-WJG82721.1;Parent=gene-PUW38_08955;Dbxref=NCBI_GP:WJG82721.1;Name=WJG82721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=PUW38_08955;product=MFS transporter;protein_id=WJG82721.1;transl_table=11 CP118116.1 Genbank gene 1826230 1827465 . + . ID=gene-PUW38_08960;Name=PUW38_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08960 CP118116.1 Protein Homology CDS 1826230 1827465 . + 0 ID=cds-WJG82722.1;Parent=gene-PUW38_08960;Dbxref=NCBI_GP:WJG82722.1;Name=WJG82722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=PUW38_08960;product=MFS transporter;protein_id=WJG82722.1;transl_table=11 CP118116.1 Genbank pseudogene 1827532 1828397 . + . ID=gene-PUW38_08965;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=pseudogene;locus_tag=PUW38_08965;pseudo=true CP118116.1 Protein Homology CDS 1827532 1828397 . + 0 ID=cds-PUW38_08965;Parent=gene-PUW38_08965;Note=frameshifted;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=PUW38_08965;product=quinate/shikimate dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1828442 1829200 . + . ID=gene-PUW38_08970;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=PUW38_08970 CP118116.1 Protein Homology CDS 1828442 1829200 . + 0 ID=cds-WJG82723.1;Parent=gene-PUW38_08970;Dbxref=NCBI_GP:WJG82723.1;Name=WJG82723.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=PUW38_08970;product=type I 3-dehydroquinate dehydratase;protein_id=WJG82723.1;transl_table=11 CP118116.1 Genbank gene 1829354 1830949 . + . ID=gene-PUW38_08975;Name=PUW38_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08975 CP118116.1 Protein Homology CDS 1829354 1830949 . + 0 ID=cds-WJG82724.1;Parent=gene-PUW38_08975;Dbxref=NCBI_GP:WJG82724.1;Name=WJG82724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=PUW38_08975;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WJG82724.1;transl_table=11 CP118116.1 Genbank gene 1830963 1832114 . + . ID=gene-PUW38_08980;Name=PUW38_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08980 CP118116.1 Protein Homology CDS 1830963 1832114 . + 0 ID=cds-WJG82725.1;Parent=gene-PUW38_08980;Dbxref=NCBI_GP:WJG82725.1;Name=WJG82725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=PUW38_08980;product=acyl-CoA dehydrogenase;protein_id=WJG82725.1;transl_table=11 CP118116.1 Genbank gene 1832190 1833080 . - . ID=gene-PUW38_08985;Name=PUW38_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08985 CP118116.1 Protein Homology CDS 1832190 1833080 . - 0 ID=cds-WJG82726.1;Parent=gene-PUW38_08985;Dbxref=NCBI_GP:WJG82726.1;Name=WJG82726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=PUW38_08985;product=AraC family transcriptional regulator;protein_id=WJG82726.1;transl_table=11 CP118116.1 Genbank pseudogene 1833543 1834307 . + . ID=gene-PUW38_08990;Name=PUW38_08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_08990;pseudo=true CP118116.1 Protein Homology CDS 1833543 1834307 . + 0 ID=cds-PUW38_08990;Parent=gene-PUW38_08990;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=PUW38_08990;product=electron transfer flavoprotein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1834329 1835264 . + . ID=gene-PUW38_08995;Name=PUW38_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_08995 CP118116.1 Protein Homology CDS 1834329 1835264 . + 0 ID=cds-WJG82727.1;Parent=gene-PUW38_08995;Dbxref=NCBI_GP:WJG82727.1;Name=WJG82727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=PUW38_08995;product=electron transfer flavoprotein subunit alpha;protein_id=WJG82727.1;transl_table=11 CP118116.1 Genbank gene 1835321 1836604 . + . ID=gene-PUW38_09000;Name=PUW38_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09000 CP118116.1 Protein Homology CDS 1835321 1836604 . + 0 ID=cds-WJG82728.1;Parent=gene-PUW38_09000;Dbxref=NCBI_GP:WJG82728.1;Name=WJG82728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=PUW38_09000;product=FAD-dependent oxidoreductase;protein_id=WJG82728.1;transl_table=11 CP118116.1 Genbank gene 1836601 1836894 . + . ID=gene-PUW38_09005;Name=PUW38_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09005 CP118116.1 Protein Homology CDS 1836601 1836894 . + 0 ID=cds-WJG82729.1;Parent=gene-PUW38_09005;Dbxref=NCBI_GP:WJG82729.1;Name=WJG82729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=PUW38_09005;product=ferredoxin family protein;protein_id=WJG82729.1;transl_table=11 CP118116.1 Genbank gene 1837132 1838772 . + . ID=gene-PUW38_09010;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=PUW38_09010 CP118116.1 Protein Homology CDS 1837132 1838772 . + 0 ID=cds-WJG82730.1;Parent=gene-PUW38_09010;Dbxref=NCBI_GP:WJG82730.1;Name=WJG82730.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=PUW38_09010;product=medium-chain fatty-acid--CoA ligase;protein_id=WJG82730.1;transl_table=11 CP118116.1 Genbank gene 1838814 1841192 . - . ID=gene-PUW38_09015;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=PUW38_09015 CP118116.1 Protein Homology CDS 1838814 1841192 . - 0 ID=cds-WJG82731.1;Parent=gene-PUW38_09015;Dbxref=NCBI_GP:WJG82731.1;Name=WJG82731.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=PUW38_09015;product=phosphoenolpyruvate synthase;protein_id=WJG82731.1;transl_table=11 CP118116.1 Genbank gene 1841528 1842361 . + . ID=gene-PUW38_09020;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=PUW38_09020 CP118116.1 Protein Homology CDS 1841528 1842361 . + 0 ID=cds-WJG82732.1;Parent=gene-PUW38_09020;Dbxref=NCBI_GP:WJG82732.1;Name=WJG82732.1;gbkey=CDS;gene=ppsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=PUW38_09020;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WJG82732.1;transl_table=11 CP118116.1 Genbank gene 1842517 1843563 . + . ID=gene-PUW38_09025;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=PUW38_09025 CP118116.1 Protein Homology CDS 1842517 1843563 . + 0 ID=cds-WJG82733.1;Parent=gene-PUW38_09025;Dbxref=NCBI_GP:WJG82733.1;Name=WJG82733.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=PUW38_09025;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WJG82733.1;transl_table=11 CP118116.1 Genbank gene 1843720 1843911 . + . ID=gene-PUW38_09030;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=PUW38_09030 CP118116.1 Protein Homology CDS 1843720 1843911 . + 0 ID=cds-WJG83207.1;Parent=gene-PUW38_09030;Dbxref=NCBI_GP:WJG83207.1;Name=WJG83207.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=PUW38_09030;product=hemin uptake protein HemP;protein_id=WJG83207.1;transl_table=11 CP118116.1 Genbank pseudogene 1843946 1845380 . - . ID=gene-PUW38_09035;Name=selO;gbkey=Gene;gene=selO;gene_biotype=pseudogene;locus_tag=PUW38_09035;pseudo=true CP118116.1 Protein Homology CDS 1843946 1845380 . - 0 ID=cds-PUW38_09035;Parent=gene-PUW38_09035;Note=frameshifted;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,protein adenylyltransferase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=PUW38_09035;product=protein adenylyltransferase SelO;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1845431 1846144 . - . ID=gene-PUW38_09040;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=PUW38_09040 CP118116.1 Protein Homology CDS 1845431 1846144 . - 0 ID=cds-WJG82734.1;Parent=gene-PUW38_09040;Dbxref=NCBI_GP:WJG82734.1;Name=WJG82734.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=PUW38_09040;product=anti-FlhDC factor YdiV;protein_id=WJG82734.1;transl_table=11 CP118116.1 Genbank gene 1846458 1846922 . - . ID=gene-PUW38_09045;Name=PUW38_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09045 CP118116.1 Protein Homology CDS 1846458 1846922 . - 0 ID=cds-WJG82735.1;Parent=gene-PUW38_09045;Dbxref=NCBI_GP:WJG82735.1;Name=WJG82735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=PUW38_09045;product=NlpC/P60 family protein;protein_id=WJG82735.1;transl_table=11 CP118116.1 Genbank gene 1846999 1847748 . - . ID=gene-PUW38_09050;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=PUW38_09050 CP118116.1 Protein Homology CDS 1846999 1847748 . - 0 ID=cds-WJG82736.1;Parent=gene-PUW38_09050;Dbxref=NCBI_GP:WJG82736.1;Name=WJG82736.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=PUW38_09050;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WJG82736.1;transl_table=11 CP118116.1 Genbank pseudogene 1847748 1848298 . - . ID=gene-PUW38_09055;Name=PUW38_09055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09055;pseudo=true CP118116.1 Protein Homology CDS 1847748 1848298 . - 0 ID=cds-PUW38_09055;Parent=gene-PUW38_09055;Note=frameshifted;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=PUW38_09055;product=glutathione peroxidase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1848390 1849370 . - . ID=gene-PUW38_09060;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=PUW38_09060 CP118116.1 Protein Homology CDS 1848390 1849370 . - 0 ID=cds-WJG82737.1;Parent=gene-PUW38_09060;Dbxref=NCBI_GP:WJG82737.1;Name=WJG82737.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=PUW38_09060;product=vitamin B12 ABC transporter permease BtuC;protein_id=WJG82737.1;transl_table=11 CP118116.1 Genbank gene 1849573 1849872 . - . ID=gene-PUW38_09065;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=PUW38_09065 CP118116.1 Protein Homology CDS 1849573 1849872 . - 0 ID=cds-WJG82738.1;Parent=gene-PUW38_09065;Dbxref=NCBI_GP:WJG82738.1;Name=WJG82738.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=PUW38_09065;product=integration host factor subunit alpha;protein_id=WJG82738.1;transl_table=11 CP118116.1 Genbank gene 1849877 1852264 . - . ID=gene-PUW38_09070;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=PUW38_09070 CP118116.1 Protein Homology CDS 1849877 1852264 . - 0 ID=cds-WJG82739.1;Parent=gene-PUW38_09070;Dbxref=NCBI_GP:WJG82739.1;Name=WJG82739.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=PUW38_09070;product=phenylalanine--tRNA ligase subunit beta;protein_id=WJG82739.1;transl_table=11 CP118116.1 Genbank pseudogene 1852280 1853262 . - . ID=gene-PUW38_09075;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=pseudogene;locus_tag=PUW38_09075;pseudo=true CP118116.1 Protein Homology CDS 1852280 1853262 . - 0 ID=cds-PUW38_09075;Parent=gene-PUW38_09075;Note=frameshifted;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=PUW38_09075;product=phenylalanine--tRNA ligase subunit alpha;pseudo=true;transl_table=11 CP118116.1 cmsearch sequence_feature 1853325 1853448 . - . ID=id-CP118116.1:1853325..1853448;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118116.1 Genbank gene 1853399 1853443 . - . ID=gene-PUW38_09080;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=PUW38_09080 CP118116.1 Protein Homology CDS 1853399 1853443 . - 0 ID=cds-WJG83208.1;Parent=gene-PUW38_09080;Dbxref=NCBI_GP:WJG83208.1;Name=WJG83208.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=PUW38_09080;product=pheST operon leader peptide PheM;protein_id=WJG83208.1;transl_table=11 CP118116.1 Genbank gene 1853564 1853920 . - . ID=gene-PUW38_09085;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=PUW38_09085 CP118116.1 Protein Homology CDS 1853564 1853920 . - 0 ID=cds-WJG82740.1;Parent=gene-PUW38_09085;Dbxref=NCBI_GP:WJG82740.1;Name=WJG82740.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=PUW38_09085;product=50S ribosomal protein L20;protein_id=WJG82740.1;transl_table=11 CP118116.1 Genbank gene 1853971 1854168 . - . ID=gene-PUW38_09090;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=PUW38_09090 CP118116.1 Protein Homology CDS 1853971 1854168 . - 0 ID=cds-WJG82741.1;Parent=gene-PUW38_09090;Dbxref=NCBI_GP:WJG82741.1;Name=WJG82741.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=PUW38_09090;product=50S ribosomal protein L35;protein_id=WJG82741.1;transl_table=11 CP118116.1 Genbank gene 1854264 1854806 . - . ID=gene-PUW38_09095;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=PUW38_09095 CP118116.1 Protein Homology CDS 1854264 1854806 . - 0 ID=cds-WJG83209.1;Parent=gene-PUW38_09095;Dbxref=NCBI_GP:WJG83209.1;Name=WJG83209.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=PUW38_09095;product=translation initiation factor IF-3;protein_id=WJG83209.1;transl_table=11 CP118116.1 Genbank gene 1854810 1856738 . - . ID=gene-PUW38_09100;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=PUW38_09100 CP118116.1 Protein Homology CDS 1854810 1856738 . - 0 ID=cds-WJG82742.1;Parent=gene-PUW38_09100;Dbxref=NCBI_GP:WJG82742.1;Name=WJG82742.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=PUW38_09100;product=threonine--tRNA ligase;protein_id=WJG82742.1;transl_table=11 CP118116.1 Genbank gene 1857651 1858874 . + . ID=gene-PUW38_09105;Name=PUW38_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09105 CP118116.1 Protein Homology CDS 1857651 1858874 . + 0 ID=cds-WJG82743.1;Parent=gene-PUW38_09105;Dbxref=NCBI_GP:WJG82743.1;Name=WJG82743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=PUW38_09105;product=O-antigen polymerase;protein_id=WJG82743.1;transl_table=11 CP118116.1 Genbank pseudogene 1859181 1859386 . - . ID=gene-PUW38_09110;Name=PUW38_09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09110;pseudo=true CP118116.1 Protein Homology CDS 1859181 1859386 . - 0 ID=cds-PUW38_09110;Parent=gene-PUW38_09110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=PUW38_09110;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1859559 1860413 . - . ID=gene-PUW38_09115;Name=PUW38_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09115 CP118116.1 Protein Homology CDS 1859559 1860413 . - 0 ID=cds-WJG82744.1;Parent=gene-PUW38_09115;Dbxref=NCBI_GP:WJG82744.1;Name=WJG82744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=PUW38_09115;product=DNA/RNA non-specific endonuclease;protein_id=WJG82744.1;transl_table=11 CP118116.1 Genbank pseudogene 1860434 1860723 . - . ID=gene-PUW38_09120;Name=PUW38_09120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09120;pseudo=true CP118116.1 Protein Homology CDS 1860434 1860723 . - 0 ID=cds-PUW38_09120;Parent=gene-PUW38_09120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=PUW38_09120;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1860866 1861825 . + . ID=gene-PUW38_09125;Name=PUW38_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09125 CP118116.1 Protein Homology CDS 1860866 1861825 . + 0 ID=cds-WJG82745.1;Parent=gene-PUW38_09125;Dbxref=NCBI_GP:WJG82745.1;Name=WJG82745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=PUW38_09125;product=lipid A deacylase LpxR family protein;protein_id=WJG82745.1;transl_table=11 CP118116.1 Genbank gene 1861874 1862632 . - . ID=gene-PUW38_09130;Name=PUW38_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09130 CP118116.1 Protein Homology CDS 1861874 1862632 . - 0 ID=cds-WJG82746.1;Parent=gene-PUW38_09130;Dbxref=NCBI_GP:WJG82746.1;Name=WJG82746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=PUW38_09130;product=YdiY family protein;protein_id=WJG82746.1;transl_table=11 CP118116.1 Genbank gene 1862921 1863853 . + . ID=gene-PUW38_09135;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=PUW38_09135 CP118116.1 Protein Homology CDS 1862921 1863853 . + 0 ID=cds-WJG82747.1;Parent=gene-PUW38_09135;Dbxref=NCBI_GP:WJG82747.1;Name=WJG82747.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=PUW38_09135;product=6-phosphofructokinase II;protein_id=WJG82747.1;transl_table=11 CP118116.1 Genbank gene 1863949 1864239 . + . ID=gene-PUW38_09140;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=PUW38_09140 CP118116.1 Protein Homology CDS 1863949 1864239 . + 0 ID=cds-WJG82748.1;Parent=gene-PUW38_09140;Dbxref=NCBI_GP:WJG82748.1;Name=WJG82748.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=PUW38_09140;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WJG82748.1;transl_table=11 CP118116.1 Genbank gene 1864346 1865206 . + . ID=gene-PUW38_09145;Name=PUW38_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09145 CP118116.1 Protein Homology CDS 1864346 1865206 . + 0 ID=cds-WJG82749.1;Parent=gene-PUW38_09145;Dbxref=NCBI_GP:WJG82749.1;Name=WJG82749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=PUW38_09145;product=fructosamine kinase family protein;protein_id=WJG82749.1;transl_table=11 CP118116.1 Genbank gene 1865249 1865785 . - . ID=gene-PUW38_09150;Name=PUW38_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09150 CP118116.1 Protein Homology CDS 1865249 1865785 . - 0 ID=cds-WJG82750.1;Parent=gene-PUW38_09150;Dbxref=NCBI_GP:WJG82750.1;Name=WJG82750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=PUW38_09150;product=YniB family protein;protein_id=WJG82750.1;transl_table=11 CP118116.1 Genbank gene 1865934 1866602 . + . ID=gene-PUW38_09155;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=PUW38_09155 CP118116.1 Protein Homology CDS 1865934 1866602 . + 0 ID=cds-WJG82751.1;Parent=gene-PUW38_09155;Dbxref=NCBI_GP:WJG82751.1;Name=WJG82751.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=PUW38_09155;product=hexitol phosphatase HxpB;protein_id=WJG82751.1;transl_table=11 CP118116.1 Genbank gene 1866740 1867339 . + . ID=gene-PUW38_09160;Name=PUW38_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09160 CP118116.1 Protein Homology CDS 1866740 1867339 . + 0 ID=cds-WJG82752.1;Parent=gene-PUW38_09160;Dbxref=NCBI_GP:WJG82752.1;Name=WJG82752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=PUW38_09160;product=metal-dependent hydrolase;protein_id=WJG82752.1;transl_table=11 CP118116.1 Genbank gene 1867476 1868867 . + . ID=gene-PUW38_09165;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=PUW38_09165 CP118116.1 Protein Homology CDS 1867476 1868867 . + 0 ID=cds-WJG82753.1;Parent=gene-PUW38_09165;Dbxref=NCBI_GP:WJG82753.1;Name=WJG82753.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=PUW38_09165;product=cystine/sulfocysteine:cation symporter;protein_id=WJG82753.1;transl_table=11 CP118116.1 Genbank gene 1868969 1869211 . - . ID=gene-PUW38_09170;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=PUW38_09170 CP118116.1 Protein Homology CDS 1868969 1869211 . - 0 ID=cds-WJG82754.1;Parent=gene-PUW38_09170;Dbxref=NCBI_GP:WJG82754.1;Name=WJG82754.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=PUW38_09170;product=cell division activator CedA;protein_id=WJG82754.1;transl_table=11 CP118116.1 Genbank gene 1869576 1871828 . + . ID=gene-PUW38_09175;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=PUW38_09175 CP118116.1 Protein Homology CDS 1869576 1871828 . + 0 ID=cds-WJG82755.1;Parent=gene-PUW38_09175;Dbxref=NCBI_GP:WJG82755.1;Name=WJG82755.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=PUW38_09175;product=catalase HPII;protein_id=WJG82755.1;transl_table=11 CP118116.1 Genbank gene 1871872 1872630 . - . ID=gene-PUW38_09180;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=PUW38_09180 CP118116.1 Protein Homology CDS 1871872 1872630 . - 0 ID=cds-WJG82756.1;Parent=gene-PUW38_09180;Dbxref=NCBI_GP:WJG82756.1;Name=WJG82756.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=PUW38_09180;product=chitin disaccharide deacetylase;protein_id=WJG82756.1;transl_table=11 CP118116.1 Genbank gene 1872643 1873998 . - . ID=gene-PUW38_09185;Name=PUW38_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09185 CP118116.1 Protein Homology CDS 1872643 1873998 . - 0 ID=cds-WJG82757.1;Parent=gene-PUW38_09185;Dbxref=NCBI_GP:WJG82757.1;Name=WJG82757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=PUW38_09185;product=6-phospho-beta-glucosidase;protein_id=WJG82757.1;transl_table=11 CP118116.1 Genbank gene 1874123 1874965 . - . ID=gene-PUW38_09190;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=PUW38_09190 CP118116.1 Protein Homology CDS 1874123 1874965 . - 0 ID=cds-WJG82758.1;Parent=gene-PUW38_09190;Dbxref=NCBI_GP:WJG82758.1;Name=WJG82758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=PUW38_09190;product=transcriptional regulator ChbR;protein_id=WJG82758.1;transl_table=11 CP118116.1 Genbank gene 1874976 1875323 . - . ID=gene-PUW38_09195;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=PUW38_09195 CP118116.1 Protein Homology CDS 1874976 1875323 . - 0 ID=cds-WJG82759.1;Parent=gene-PUW38_09195;Dbxref=NCBI_GP:WJG82759.1;Name=WJG82759.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=PUW38_09195;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WJG82759.1;transl_table=11 CP118116.1 Genbank gene 1875374 1876732 . - . ID=gene-PUW38_09200;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=PUW38_09200 CP118116.1 Protein Homology CDS 1875374 1876732 . - 0 ID=cds-WJG82760.1;Parent=gene-PUW38_09200;Dbxref=NCBI_GP:WJG82760.1;Name=WJG82760.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=PUW38_09200;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WJG82760.1;transl_table=11 CP118116.1 Genbank gene 1876815 1877135 . - . ID=gene-PUW38_09205;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=PUW38_09205 CP118116.1 Protein Homology CDS 1876815 1877135 . - 0 ID=cds-WJG82761.1;Parent=gene-PUW38_09205;Dbxref=NCBI_GP:WJG82761.1;Name=WJG82761.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=PUW38_09205;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WJG82761.1;transl_table=11 CP118116.1 Genbank gene 1877436 1877777 . - . ID=gene-PUW38_09210;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=PUW38_09210 CP118116.1 Protein Homology CDS 1877436 1877777 . - 0 ID=cds-WJG82762.1;Parent=gene-PUW38_09210;Dbxref=NCBI_GP:WJG82762.1;Name=WJG82762.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=PUW38_09210;product=osmotically-inducible lipoprotein OsmE;protein_id=WJG82762.1;transl_table=11 CP118116.1 Genbank gene 1877996 1878823 . + . ID=gene-PUW38_09215;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=PUW38_09215 CP118116.1 Protein Homology CDS 1877996 1878823 . + 0 ID=cds-WJG82763.1;Parent=gene-PUW38_09215;Dbxref=NCBI_GP:WJG82763.1;Name=WJG82763.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=PUW38_09215;product=ammonia-dependent NAD(+) synthetase;protein_id=WJG82763.1;transl_table=11 CP118116.1 Genbank gene 1878944 1879825 . + . ID=gene-PUW38_09220;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=PUW38_09220 CP118116.1 Protein Homology CDS 1878944 1879825 . + 0 ID=cds-WJG82764.1;Parent=gene-PUW38_09220;Dbxref=NCBI_GP:WJG82764.1;Name=WJG82764.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=PUW38_09220;product=excinuclease Cho;protein_id=WJG82764.1;transl_table=11 CP118116.1 Genbank gene 1879900 1880385 . - . ID=gene-PUW38_09225;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=PUW38_09225 CP118116.1 Protein Homology CDS 1879900 1880385 . - 0 ID=cds-WJG82765.1;Parent=gene-PUW38_09225;Dbxref=NCBI_GP:WJG82765.1;Name=WJG82765.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=PUW38_09225;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WJG82765.1;transl_table=11 CP118116.1 Genbank gene 1880721 1881689 . - . ID=gene-PUW38_09230;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=PUW38_09230 CP118116.1 Protein Homology CDS 1880721 1881689 . - 0 ID=cds-WJG82766.1;Parent=gene-PUW38_09230;Dbxref=NCBI_GP:WJG82766.1;Name=WJG82766.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=PUW38_09230;product=succinylglutamate desuccinylase;protein_id=WJG82766.1;transl_table=11 CP118116.1 Genbank gene 1881682 1883025 . - . ID=gene-PUW38_09235;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=PUW38_09235 CP118116.1 Protein Homology CDS 1881682 1883025 . - 0 ID=cds-WJG82767.1;Parent=gene-PUW38_09235;Dbxref=NCBI_GP:WJG82767.1;Name=WJG82767.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=PUW38_09235;product=N-succinylarginine dihydrolase;protein_id=WJG82767.1;transl_table=11 CP118116.1 Genbank gene 1883022 1884500 . - . ID=gene-PUW38_09240;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=PUW38_09240 CP118116.1 Protein Homology CDS 1883022 1884500 . - 0 ID=cds-WJG82768.1;Parent=gene-PUW38_09240;Dbxref=NCBI_GP:WJG82768.1;Name=WJG82768.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=PUW38_09240;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WJG82768.1;transl_table=11 CP118116.1 Genbank pseudogene 1884497 1884925 . - . ID=gene-PUW38_09245;Name=PUW38_09245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09245;pseudo=true CP118116.1 Protein Homology CDS 1884497 1884925 . - 0 ID=cds-PUW38_09245;Parent=gene-PUW38_09245;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=PUW38_09245;product=arginine N-succinyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1884949 1886175 . - . ID=gene-PUW38_09250;Name=PUW38_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09250 CP118116.1 Protein Homology CDS 1884949 1886175 . - 0 ID=cds-WJG82769.1;Parent=gene-PUW38_09250;Dbxref=NCBI_GP:WJG82769.1;Name=WJG82769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=PUW38_09250;product=aspartate aminotransferase family protein;protein_id=WJG82769.1;transl_table=11 CP118116.1 Genbank gene 1886621 1887427 . + . ID=gene-PUW38_09255;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=PUW38_09255 CP118116.1 Protein Homology CDS 1886621 1887427 . + 0 ID=cds-WJG82770.1;Parent=gene-PUW38_09255;Dbxref=NCBI_GP:WJG82770.1;Name=WJG82770.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=PUW38_09255;product=exodeoxyribonuclease III;protein_id=WJG82770.1;transl_table=11 CP118116.1 Genbank gene 1887500 1887916 . + . ID=gene-PUW38_09260;Name=PUW38_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09260 CP118116.1 Protein Homology CDS 1887500 1887916 . + 0 ID=cds-WJG82771.1;Parent=gene-PUW38_09260;Dbxref=NCBI_GP:WJG82771.1;Name=WJG82771.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=PUW38_09260;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WJG82771.1;transl_table=11 CP118116.1 Genbank gene 1887876 1888151 . - . ID=gene-PUW38_09265;Name=PUW38_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09265 CP118116.1 Protein Homology CDS 1887876 1888151 . - 0 ID=cds-WJG82772.1;Parent=gene-PUW38_09265;Dbxref=NCBI_GP:WJG82772.1;Name=WJG82772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=PUW38_09265;product=YnjH family protein;protein_id=WJG82772.1;transl_table=11 CP118116.1 Genbank pseudogene 1888390 1889733 . + . ID=gene-PUW38_09270;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=pseudogene;locus_tag=PUW38_09270;pseudo=true CP118116.1 Protein Homology CDS 1888390 1889733 . + 0 ID=cds-PUW38_09270;Parent=gene-PUW38_09270;Note=internal stop;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=PUW38_09270;product=NADP-specific glutamate dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1889763 1891711 . - . ID=gene-PUW38_09275;Name=topB;gbkey=Gene;gene=topB;gene_biotype=pseudogene;locus_tag=PUW38_09275;pseudo=true CP118116.1 Protein Homology CDS 1889763 1891711 . - 0 ID=cds-PUW38_09275;Parent=gene-PUW38_09275;Note=frameshifted;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=PUW38_09275;product=DNA topoisomerase III;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1891716 1892759 . - . ID=gene-PUW38_09280;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=PUW38_09280 CP118116.1 Protein Homology CDS 1891716 1892759 . - 0 ID=cds-WJG82773.1;Parent=gene-PUW38_09280;Dbxref=NCBI_GP:WJG82773.1;Name=WJG82773.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=PUW38_09280;product=selenide%2C water dikinase SelD;protein_id=WJG82773.1;transl_table=11 CP118116.1 Genbank gene 1892877 1893428 . - . ID=gene-PUW38_09285;Name=PUW38_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09285 CP118116.1 Protein Homology CDS 1892877 1893428 . - 0 ID=cds-WJG82774.1;Parent=gene-PUW38_09285;Dbxref=NCBI_GP:WJG82774.1;Name=WJG82774.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=PUW38_09285;product=NAD(P)H nitroreductase;protein_id=WJG82774.1;transl_table=11 CP118116.1 Genbank gene 1893602 1895458 . + . ID=gene-PUW38_09290;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=PUW38_09290 CP118116.1 Protein Homology CDS 1893602 1895458 . + 0 ID=cds-WJG82775.1;Parent=gene-PUW38_09290;Dbxref=NCBI_GP:WJG82775.1;Name=WJG82775.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=PUW38_09290;product=signal peptide peptidase SppA;protein_id=WJG82775.1;transl_table=11 CP118116.1 Genbank gene 1895554 1896570 . + . ID=gene-PUW38_09295;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=PUW38_09295 CP118116.1 Protein Homology CDS 1895554 1896570 . + 0 ID=cds-WJG82776.1;Parent=gene-PUW38_09295;Dbxref=NCBI_GP:WJG82776.1;Name=WJG82776.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=PUW38_09295;product=asparaginase;protein_id=WJG82776.1;transl_table=11 CP118116.1 Genbank gene 1896597 1897253 . + . ID=gene-PUW38_09300;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=PUW38_09300 CP118116.1 Protein Homology CDS 1896597 1897253 . + 0 ID=cds-WJG82777.1;Parent=gene-PUW38_09300;Dbxref=NCBI_GP:WJG82777.1;Name=WJG82777.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=PUW38_09300;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WJG82777.1;transl_table=11 CP118116.1 Genbank gene 1897356 1897757 . - . ID=gene-PUW38_09305;Name=PUW38_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09305 CP118116.1 Protein Homology CDS 1897356 1897757 . - 0 ID=cds-WJG83210.1;Parent=gene-PUW38_09305;Dbxref=NCBI_GP:WJG83210.1;Name=WJG83210.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=PUW38_09305;product=MFS transporter;protein_id=WJG83210.1;transl_table=11 CP118116.1 Genbank gene 1897700 1898713 . - . ID=gene-PUW38_09310;Name=PUW38_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09310 CP118116.1 Protein Homology CDS 1897700 1898713 . - 0 ID=cds-WJG82778.1;Parent=gene-PUW38_09310;Dbxref=NCBI_GP:WJG82778.1;Name=WJG82778.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PUW38_09310;product=MFS transporter;protein_id=WJG82778.1;transl_table=11 CP118116.1 Genbank gene 1898849 1899607 . - . ID=gene-PUW38_09315;Name=PUW38_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09315 CP118116.1 Protein Homology CDS 1898849 1899607 . - 0 ID=cds-WJG82779.1;Parent=gene-PUW38_09315;Dbxref=NCBI_GP:WJG82779.1;Name=WJG82779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=PUW38_09315;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG82779.1;transl_table=11 CP118116.1 Genbank gene 1899737 1900720 . - . ID=gene-PUW38_09320;Name=PUW38_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09320 CP118116.1 Protein Homology CDS 1899737 1900720 . - 0 ID=cds-WJG82780.1;Parent=gene-PUW38_09320;Dbxref=NCBI_GP:WJG82780.1;Name=WJG82780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=PUW38_09320;product=aldo/keto reductase;protein_id=WJG82780.1;transl_table=11 CP118116.1 Genbank pseudogene 1900730 1901676 . - . ID=gene-PUW38_09325;Name=PUW38_09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09325;pseudo=true CP118116.1 Protein Homology CDS 1900730 1901676 . - 0 ID=cds-PUW38_09325;Parent=gene-PUW38_09325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226390.1;locus_tag=PUW38_09325;product=sugar kinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1901681 1902517 . - . ID=gene-PUW38_09330;Name=PUW38_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09330 CP118116.1 Protein Homology CDS 1901681 1902517 . - 0 ID=cds-WJG82781.1;Parent=gene-PUW38_09330;Dbxref=NCBI_GP:WJG82781.1;Name=WJG82781.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=PUW38_09330;product=ketose-bisphosphate aldolase;protein_id=WJG82781.1;transl_table=11 CP118116.1 Genbank pseudogene 1902539 1903583 . - . ID=gene-PUW38_09335;Name=PUW38_09335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09335;pseudo=true CP118116.1 Protein Homology CDS 1902539 1903583 . - 0 ID=cds-PUW38_09335;Parent=gene-PUW38_09335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=PUW38_09335;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1903594 1904973 . - . ID=gene-PUW38_09340;Name=PUW38_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09340 CP118116.1 Protein Homology CDS 1903594 1904973 . - 0 ID=cds-WJG82782.1;Parent=gene-PUW38_09340;Dbxref=NCBI_GP:WJG82782.1;Name=WJG82782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=PUW38_09340;product=MFS transporter;protein_id=WJG82782.1;transl_table=11 CP118116.1 Genbank gene 1905000 1906076 . - . ID=gene-PUW38_09345;Name=PUW38_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09345 CP118116.1 Protein Homology CDS 1905000 1906076 . - 0 ID=cds-WJG82783.1;Parent=gene-PUW38_09345;Dbxref=NCBI_GP:WJG82783.1;Name=WJG82783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=PUW38_09345;product=zinc-binding dehydrogenase;protein_id=WJG82783.1;transl_table=11 CP118116.1 Genbank pseudogene 1906372 1906794 . + . ID=gene-PUW38_09350;Name=PUW38_09350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09350;pseudo=true CP118116.1 Protein Homology CDS 1906372 1906794 . + 0 ID=cds-PUW38_09350;Parent=gene-PUW38_09350;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892855.1;locus_tag=PUW38_09350;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1906970 1907248 . - . ID=gene-PUW38_09355;Name=PUW38_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09355 CP118116.1 Protein Homology CDS 1906970 1907248 . - 0 ID=cds-WJG82784.1;Parent=gene-PUW38_09355;Dbxref=NCBI_GP:WJG82784.1;Name=WJG82784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=PUW38_09355;product=YeaC family protein;protein_id=WJG82784.1;transl_table=11 CP118116.1 Genbank gene 1907290 1907703 . - . ID=gene-PUW38_09360;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=PUW38_09360 CP118116.1 Protein Homology CDS 1907290 1907703 . - 0 ID=cds-WJG82785.1;Parent=gene-PUW38_09360;Dbxref=NCBI_GP:WJG82785.1;Name=WJG82785.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=PUW38_09360;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WJG82785.1;transl_table=11 CP118116.1 Genbank gene 1908045 1909040 . + . ID=gene-PUW38_09365;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=PUW38_09365 CP118116.1 Protein Homology CDS 1908045 1909040 . + 0 ID=cds-WJG82786.1;Parent=gene-PUW38_09365;Dbxref=NCBI_GP:WJG82786.1;Name=WJG82786.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=PUW38_09365;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WJG82786.1;transl_table=11 CP118116.1 Genbank gene 1909368 1910252 . + . ID=gene-PUW38_09370;Name=PUW38_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09370 CP118116.1 Protein Homology CDS 1909368 1910252 . + 0 ID=cds-WJG82787.1;Parent=gene-PUW38_09370;Dbxref=NCBI_GP:WJG82787.1;Name=WJG82787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=PUW38_09370;product=D-hexose-6-phosphate mutarotase;protein_id=WJG82787.1;transl_table=11 CP118116.1 Genbank gene 1910351 1911208 . - . ID=gene-PUW38_09375;Name=PUW38_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09375 CP118116.1 Protein Homology CDS 1910351 1911208 . - 0 ID=cds-WJG83211.1;Parent=gene-PUW38_09375;Dbxref=NCBI_GP:WJG83211.1;Name=WJG83211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=PUW38_09375;product=aldo/keto reductase;protein_id=WJG83211.1;transl_table=11 CP118116.1 Genbank pseudogene 1911305 1912501 . - . ID=gene-PUW38_09380;Name=PUW38_09380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09380;pseudo=true CP118116.1 Protein Homology CDS 1911305 1912501 . - 0 ID=cds-PUW38_09380;Parent=gene-PUW38_09380;Note=frameshifted;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=PUW38_09380;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 1912730 1912975 . + . ID=gene-PUW38_09385;Name=PUW38_09385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09385;pseudo=true CP118116.1 Protein Homology CDS 1912730 1912975 . + 0 ID=cds-PUW38_09385;Parent=gene-PUW38_09385;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=PUW38_09385;product=diguanylate cyclase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1913025 1913543 . + . ID=gene-PUW38_09390;Name=PUW38_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09390 CP118116.1 Protein Homology CDS 1913025 1913543 . + 0 ID=cds-WJG83212.1;Parent=gene-PUW38_09390;Dbxref=NCBI_GP:WJG83212.1;Name=WJG83212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=PUW38_09390;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WJG83212.1;transl_table=11 CP118116.1 Genbank gene 1913540 1913647 . - . ID=gene-PUW38_09395;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=PUW38_09395 CP118116.1 Protein Homology CDS 1913540 1913647 . - 0 ID=cds-WJG82788.1;Parent=gene-PUW38_09395;Dbxref=NCBI_GP:WJG82788.1;Name=WJG82788.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=PUW38_09395;product=small membrane protein YoaI;protein_id=WJG82788.1;transl_table=11 CP118116.1 Genbank gene 1913853 1914299 . + . ID=gene-PUW38_09400;Name=PUW38_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09400 CP118116.1 Protein Homology CDS 1913853 1914299 . + 0 ID=cds-WJG82789.1;Parent=gene-PUW38_09400;Dbxref=NCBI_GP:WJG82789.1;Name=WJG82789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=PUW38_09400;product=DUF441 domain-containing protein;protein_id=WJG82789.1;transl_table=11 CP118116.1 Genbank gene 1914279 1915073 . - . ID=gene-PUW38_09405;Name=PUW38_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09405 CP118116.1 Protein Homology CDS 1914279 1915073 . - 0 ID=cds-WJG82790.1;Parent=gene-PUW38_09405;Dbxref=NCBI_GP:WJG82790.1;Name=WJG82790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=PUW38_09405;product=helix-turn-helix transcriptional regulator;protein_id=WJG82790.1;transl_table=11 CP118116.1 Genbank gene 1915174 1916358 . + . ID=gene-PUW38_09410;Name=PUW38_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09410 CP118116.1 Protein Homology CDS 1915174 1916358 . + 0 ID=cds-WJG82791.1;Parent=gene-PUW38_09410;Dbxref=NCBI_GP:WJG82791.1;Name=WJG82791.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=PUW38_09410;product=CynX/NimT family MFS transporter;protein_id=WJG82791.1;transl_table=11 CP118116.1 Genbank gene 1916477 1916824 . + . ID=gene-PUW38_09415;Name=PUW38_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09415 CP118116.1 Protein Homology CDS 1916477 1916824 . + 0 ID=cds-WJG82792.1;Parent=gene-PUW38_09415;Dbxref=NCBI_GP:WJG82792.1;Name=WJG82792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=PUW38_09415;product=DUF488 domain-containing protein;protein_id=WJG82792.1;transl_table=11 CP118116.1 Genbank gene 1916810 1917121 . - . ID=gene-PUW38_09420;Name=PUW38_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09420 CP118116.1 Protein Homology CDS 1916810 1917121 . - 0 ID=cds-WJG82793.1;Parent=gene-PUW38_09420;Dbxref=NCBI_GP:WJG82793.1;Name=WJG82793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=PUW38_09420;product=hypothetical protein;protein_id=WJG82793.1;transl_table=11 CP118116.1 Genbank gene 1917190 1917441 . - . ID=gene-PUW38_09425;Name=PUW38_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09425 CP118116.1 Protein Homology CDS 1917190 1917441 . - 0 ID=cds-WJG82794.1;Parent=gene-PUW38_09425;Dbxref=NCBI_GP:WJG82794.1;Name=WJG82794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=PUW38_09425;product=DUF333 domain-containing protein;protein_id=WJG82794.1;transl_table=11 CP118116.1 Genbank gene 1917637 1917735 . + . ID=gene-PUW38_09430;Name=PUW38_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09430 CP118116.1 Protein Homology CDS 1917637 1917735 . + 0 ID=cds-WJG82795.1;Parent=gene-PUW38_09430;Dbxref=NCBI_GP:WJG82795.1;Name=WJG82795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=PUW38_09430;product=YoaK family small membrane protein;protein_id=WJG82795.1;transl_table=11 CP118116.1 Genbank gene 1917874 1918122 . - . ID=gene-PUW38_09435;Name=PUW38_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09435 CP118116.1 Protein Homology CDS 1917874 1918122 . - 0 ID=cds-WJG82796.1;Parent=gene-PUW38_09435;Dbxref=NCBI_GP:WJG82796.1;Name=WJG82796.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=PUW38_09435;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WJG82796.1;transl_table=11 CP118116.1 Genbank gene 1918436 1919077 . - . ID=gene-PUW38_09440;Name=PUW38_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09440 CP118116.1 Protein Homology CDS 1918436 1919077 . - 0 ID=cds-WJG82797.1;Parent=gene-PUW38_09440;Dbxref=NCBI_GP:WJG82797.1;Name=WJG82797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=PUW38_09440;product=hypothetical protein;protein_id=WJG82797.1;transl_table=11 CP118116.1 Genbank gene 1919307 1919489 . - . ID=gene-PUW38_09445;Name=PUW38_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09445 CP118116.1 Protein Homology CDS 1919307 1919489 . - 0 ID=cds-WJG82798.1;Parent=gene-PUW38_09445;Dbxref=NCBI_GP:WJG82798.1;Name=WJG82798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=PUW38_09445;product=DUF1869 domain-containing protein;protein_id=WJG82798.1;transl_table=11 CP118116.1 Genbank gene 1919492 1919854 . - . ID=gene-PUW38_09450;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=PUW38_09450 CP118116.1 Protein Homology CDS 1919492 1919854 . - 0 ID=cds-WJG82799.1;Parent=gene-PUW38_09450;Dbxref=NCBI_GP:WJG82799.1;Name=WJG82799.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=PUW38_09450;product=DUF1971 domain-containing protein YeaR;protein_id=WJG82799.1;transl_table=11 CP118116.1 Genbank gene 1920027 1920665 . - . ID=gene-PUW38_09455;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=PUW38_09455 CP118116.1 Protein Homology CDS 1920027 1920665 . - 0 ID=cds-WJG82800.1;Parent=gene-PUW38_09455;Dbxref=NCBI_GP:WJG82800.1;Name=WJG82800.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=PUW38_09455;product=leucine efflux protein LeuE;protein_id=WJG82800.1;transl_table=11 CP118116.1 Genbank gene 1920862 1921407 . - . ID=gene-PUW38_09460;Name=PUW38_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09460 CP118116.1 Protein Homology CDS 1920862 1921407 . - 0 ID=cds-WJG82801.1;Parent=gene-PUW38_09460;Dbxref=NCBI_GP:WJG82801.1;Name=WJG82801.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=PUW38_09460;product=chorismate mutase;protein_id=WJG82801.1;transl_table=11 CP118116.1 Genbank pseudogene 1921490 1921644 . + . ID=gene-PUW38_09465;Name=PUW38_09465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09465;pseudo=true CP118116.1 Protein Homology CDS 1921490 1921644 . + 0 ID=cds-PUW38_09465;Parent=gene-PUW38_09465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=PUW38_09465;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1921723 1921971 . + . ID=gene-PUW38_09470;Name=PUW38_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09470 CP118116.1 Protein Homology CDS 1921723 1921971 . + 0 ID=cds-WJG82802.1;Parent=gene-PUW38_09470;Dbxref=NCBI_GP:WJG82802.1;Name=WJG82802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=PUW38_09470;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WJG82802.1;transl_table=11 CP118116.1 Genbank gene 1922225 1923073 . - . ID=gene-PUW38_09475;Name=PUW38_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09475 CP118116.1 Protein Homology CDS 1922225 1923073 . - 0 ID=cds-WJG82803.1;Parent=gene-PUW38_09475;Dbxref=NCBI_GP:WJG82803.1;Name=WJG82803.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=PUW38_09475;product=MerR family transcriptional regulator;protein_id=WJG82803.1;transl_table=11 CP118116.1 Genbank gene 1923142 1923735 . - . ID=gene-PUW38_09480;Name=PUW38_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09480 CP118116.1 Protein Homology CDS 1923142 1923735 . - 0 ID=cds-WJG83213.1;Parent=gene-PUW38_09480;Dbxref=NCBI_GP:WJG83213.1;Name=WJG83213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=PUW38_09480;product=helix-turn-helix transcriptional regulator;protein_id=WJG83213.1;transl_table=11 CP118116.1 Genbank gene 1923880 1924668 . - . ID=gene-PUW38_09485;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=PUW38_09485 CP118116.1 Protein Homology CDS 1923880 1924668 . - 0 ID=cds-WJG82804.1;Parent=gene-PUW38_09485;Dbxref=NCBI_GP:WJG82804.1;Name=WJG82804.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=PUW38_09485;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WJG82804.1;transl_table=11 CP118116.1 Genbank pseudogene 1924777 1925423 . - . ID=gene-PUW38_09490;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=pseudogene;locus_tag=PUW38_09490;pseudo=true CP118116.1 Protein Homology CDS 1924777 1925423 . - 0 ID=cds-PUW38_09490;Parent=gene-PUW38_09490;Note=frameshifted;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=PUW38_09490;product=metal-binding protein ZinT;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1925535 1925611 . - . ID=gene-PUW38_09495;Name=PUW38_09495;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_09495 CP118116.1 tRNAscan-SE tRNA 1925535 1925611 . - . ID=rna-PUW38_09495;Parent=gene-PUW38_09495;anticodon=(pos:complement(1925575..1925577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_09495;product=tRNA-Arg CP118116.1 tRNAscan-SE exon 1925535 1925611 . - . ID=exon-PUW38_09495-1;Parent=rna-PUW38_09495;anticodon=(pos:complement(1925575..1925577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_09495;product=tRNA-Arg CP118116.1 Genbank gene 1925620 1925946 . - . ID=gene-PUW38_09500;Name=PUW38_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09500 CP118116.1 Protein Homology CDS 1925620 1925946 . - 0 ID=cds-WJG82805.1;Parent=gene-PUW38_09500;Dbxref=NCBI_GP:WJG82805.1;Name=WJG82805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=PUW38_09500;product=four-helix bundle copper-binding protein;protein_id=WJG82805.1;transl_table=11 CP118116.1 Genbank pseudogene 1926140 1927272 . + . ID=gene-PUW38_09505;Name=PUW38_09505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09505;pseudo=true CP118116.1 Protein Homology CDS 1926140 1927272 . + 0 ID=cds-PUW38_09505;Parent=gene-PUW38_09505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=PUW38_09505;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1927353 1927943 . - . ID=gene-PUW38_09510;Name=PUW38_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09510 CP118116.1 Protein Homology CDS 1927353 1927943 . - 0 ID=cds-WJG82806.1;Parent=gene-PUW38_09510;Dbxref=NCBI_GP:WJG82806.1;Name=WJG82806.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=PUW38_09510;product=ATP-binding cassette domain-containing protein;protein_id=WJG82806.1;transl_table=11 CP118116.1 Genbank gene 1927937 1928734 . - . ID=gene-PUW38_09515;Name=PUW38_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09515 CP118116.1 Protein Homology CDS 1927937 1928734 . - 0 ID=cds-WJG82807.1;Parent=gene-PUW38_09515;Dbxref=NCBI_GP:WJG82807.1;Name=WJG82807.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=PUW38_09515;product=ATP-binding cassette domain-containing protein;protein_id=WJG82807.1;transl_table=11 CP118116.1 Genbank gene 1928728 1929540 . - . ID=gene-PUW38_09520;Name=PUW38_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09520 CP118116.1 Protein Homology CDS 1928728 1929540 . - 0 ID=cds-WJG82808.1;Parent=gene-PUW38_09520;Dbxref=NCBI_GP:WJG82808.1;Name=WJG82808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=PUW38_09520;product=ABC transporter permease;protein_id=WJG82808.1;transl_table=11 CP118116.1 Genbank gene 1929530 1930504 . - . ID=gene-PUW38_09525;Name=PUW38_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09525 CP118116.1 Protein Homology CDS 1929530 1930504 . - 0 ID=cds-WJG83214.1;Parent=gene-PUW38_09525;Dbxref=NCBI_GP:WJG83214.1;Name=WJG83214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=PUW38_09525;product=ABC transporter permease;protein_id=WJG83214.1;transl_table=11 CP118116.1 Genbank gene 1930504 1932138 . - . ID=gene-PUW38_09530;Name=PUW38_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09530 CP118116.1 Protein Homology CDS 1930504 1932138 . - 0 ID=cds-WJG83215.1;Parent=gene-PUW38_09530;Dbxref=NCBI_GP:WJG83215.1;Name=WJG83215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=PUW38_09530;product=ABC transporter substrate-binding protein;protein_id=WJG83215.1;transl_table=11 CP118116.1 Genbank gene 1932820 1933134 . + . ID=gene-PUW38_09535;Name=PUW38_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09535 CP118116.1 Protein Homology CDS 1932820 1933134 . + 0 ID=cds-WJG82809.1;Parent=gene-PUW38_09535;Dbxref=NCBI_GP:WJG82809.1;Name=WJG82809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=PUW38_09535;product=TRL-like family protein;protein_id=WJG82809.1;transl_table=11 CP118116.1 Genbank gene 1933283 1933813 . + . ID=gene-PUW38_09540;Name=PUW38_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09540 CP118116.1 Protein Homology CDS 1933283 1933813 . + 0 ID=cds-WJG82810.1;Parent=gene-PUW38_09540;Dbxref=NCBI_GP:WJG82810.1;Name=WJG82810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=PUW38_09540;product=cytochrome b;protein_id=WJG82810.1;transl_table=11 CP118116.1 Genbank gene 1933896 1934939 . - . ID=gene-PUW38_09545;Name=PUW38_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09545 CP118116.1 Protein Homology CDS 1933896 1934939 . - 0 ID=cds-WJG82811.1;Parent=gene-PUW38_09545;Dbxref=NCBI_GP:WJG82811.1;Name=WJG82811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=PUW38_09545;product=exo-alpha-sialidase;protein_id=WJG82811.1;transl_table=11 CP118116.1 Genbank gene 1935278 1935745 . - . ID=gene-PUW38_09550;Name=PUW38_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09550 CP118116.1 Protein Homology CDS 1935278 1935745 . - 0 ID=cds-WJG83216.1;Parent=gene-PUW38_09550;Dbxref=NCBI_GP:WJG83216.1;Name=WJG83216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=PUW38_09550;product=Hsp20 family protein;protein_id=WJG83216.1;transl_table=11 CP118116.1 Genbank gene 1935898 1936170 . - . ID=gene-PUW38_09555;Name=PUW38_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09555 CP118116.1 Protein Homology CDS 1935898 1936170 . - 0 ID=cds-WJG82812.1;Parent=gene-PUW38_09555;Dbxref=NCBI_GP:WJG82812.1;Name=WJG82812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=PUW38_09555;product=hypothetical protein;protein_id=WJG82812.1;transl_table=11 CP118116.1 Genbank gene 1936872 1937216 . + . ID=gene-PUW38_09560;Name=PUW38_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09560 CP118116.1 Protein Homology CDS 1936872 1937216 . + 0 ID=cds-WJG82813.1;Parent=gene-PUW38_09560;Dbxref=NCBI_GP:WJG82813.1;Name=WJG82813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=PUW38_09560;product=c-type lysozyme inhibitor;protein_id=WJG82813.1;transl_table=11 CP118116.1 Genbank gene 1937971 1938047 . - . ID=gene-PUW38_09565;Name=PUW38_09565;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_09565 CP118116.1 tRNAscan-SE tRNA 1937971 1938047 . - . ID=rna-PUW38_09565;Parent=gene-PUW38_09565;anticodon=(pos:complement(1938011..1938013));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_09565;product=tRNA-Arg CP118116.1 tRNAscan-SE exon 1937971 1938047 . - . ID=exon-PUW38_09565-1;Parent=rna-PUW38_09565;anticodon=(pos:complement(1938011..1938013));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_09565;product=tRNA-Arg CP118116.1 Genbank gene 1938438 1938995 . - . ID=gene-PUW38_09570;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=PUW38_09570 CP118116.1 Protein Homology CDS 1938438 1938995 . - 0 ID=cds-WJG82814.1;Parent=gene-PUW38_09570;Dbxref=NCBI_GP:WJG82814.1;Name=WJG82814.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=PUW38_09570;product=virulence membrane protein PagC;protein_id=WJG82814.1;transl_table=11 CP118116.1 Genbank gene 1939807 1940070 . + . ID=gene-PUW38_09575;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=PUW38_09575 CP118116.1 Protein Homology CDS 1939807 1940070 . + 0 ID=cds-WJG82815.1;Parent=gene-PUW38_09575;Dbxref=NCBI_GP:WJG82815.1;Name=WJG82815.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=PUW38_09575;product=virulence protein PagD;protein_id=WJG82815.1;transl_table=11 CP118116.1 Genbank pseudogene 1940202 1940403 . + . ID=gene-PUW38_09580;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=pseudogene;locus_tag=PUW38_09580;pseudo=true CP118116.1 Protein Homology CDS 1940202 1940403 . + 0 ID=cds-PUW38_09580;Parent=gene-PUW38_09580;Note=frameshifted;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=PUW38_09580;product=cold shock-like protein CspF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1940818 1941339 . + . ID=gene-PUW38_09585;Name=PUW38_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09585 CP118116.1 Protein Homology CDS 1940818 1941339 . + 0 ID=cds-WJG82816.1;Parent=gene-PUW38_09585;Dbxref=NCBI_GP:WJG82816.1;Name=WJG82816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=PUW38_09585;product=RICIN domain-containing protein;protein_id=WJG82816.1;transl_table=11 CP118116.1 Genbank gene 1941530 1941769 . + . ID=gene-PUW38_09590;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=PUW38_09590 CP118116.1 Protein Homology CDS 1941530 1941769 . + 0 ID=cds-WJG82817.1;Parent=gene-PUW38_09590;Dbxref=NCBI_GP:WJG82817.1;Name=WJG82817.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=PUW38_09590;product=virulence protein MsgA;protein_id=WJG82817.1;transl_table=11 CP118116.1 Genbank pseudogene 1942259 1943048 . + . ID=gene-PUW38_09595;Name=PUW38_09595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09595;pseudo=true CP118116.1 Protein Homology CDS 1942259 1943048 . + 0 ID=cds-PUW38_09595;Parent=gene-PUW38_09595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=PUW38_09595;product=lipoprotein EnvF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1944036 1945160 . - . ID=gene-PUW38_09600;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=PUW38_09600 CP118116.1 Protein Homology CDS 1944036 1945160 . - 0 ID=cds-WJG82818.1;Parent=gene-PUW38_09600;Dbxref=NCBI_GP:WJG82818.1;Name=WJG82818.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=PUW38_09600;product=type III secretion system effector SopF;protein_id=WJG82818.1;transl_table=11 CP118116.1 Genbank gene 1945621 1946871 . - . ID=gene-PUW38_09605;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=PUW38_09605 CP118116.1 Protein Homology CDS 1945621 1946871 . - 0 ID=cds-WJG82819.1;Parent=gene-PUW38_09605;Dbxref=NCBI_GP:WJG82819.1;Name=WJG82819.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=PUW38_09605;product=NADP-dependent isocitrate dehydrogenase;protein_id=WJG82819.1;transl_table=11 CP118116.1 Genbank gene 1947043 1947708 . + . ID=gene-PUW38_09610;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=PUW38_09610 CP118116.1 Protein Homology CDS 1947043 1947708 . + 0 ID=cds-WJG82820.1;Parent=gene-PUW38_09610;Dbxref=NCBI_GP:WJG82820.1;Name=WJG82820.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=PUW38_09610;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WJG82820.1;transl_table=11 CP118116.1 Genbank gene 1947705 1948034 . + . ID=gene-PUW38_09615;Name=PUW38_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09615 CP118116.1 Protein Homology CDS 1947705 1948034 . + 0 ID=cds-WJG82821.1;Parent=gene-PUW38_09615;Dbxref=NCBI_GP:WJG82821.1;Name=WJG82821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=PUW38_09615;product=hypothetical protein;protein_id=WJG82821.1;transl_table=11 CP118116.1 Genbank gene 1948046 1948507 . + . ID=gene-PUW38_09620;Name=PUW38_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09620 CP118116.1 Protein Homology CDS 1948046 1948507 . + 0 ID=cds-WJG82822.1;Parent=gene-PUW38_09620;Dbxref=NCBI_GP:WJG82822.1;Name=WJG82822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=PUW38_09620;product=NUDIX hydrolase;protein_id=WJG82822.1;transl_table=11 CP118116.1 Genbank gene 1948561 1949667 . + . ID=gene-PUW38_09625;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=PUW38_09625 CP118116.1 Protein Homology CDS 1948561 1949667 . + 0 ID=cds-WJG82823.1;Parent=gene-PUW38_09625;Dbxref=NCBI_GP:WJG82823.1;Name=WJG82823.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=PUW38_09625;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WJG82823.1;transl_table=11 CP118116.1 Genbank gene 1949754 1950395 . + . ID=gene-PUW38_09630;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=PUW38_09630 CP118116.1 Protein Homology CDS 1949754 1950395 . + 0 ID=cds-WJG82824.1;Parent=gene-PUW38_09630;Dbxref=NCBI_GP:WJG82824.1;Name=WJG82824.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=PUW38_09630;product=high frequency lysogenization protein HflD;protein_id=WJG82824.1;transl_table=11 CP118116.1 Genbank pseudogene 1950399 1951768 . + . ID=gene-PUW38_09635;Name=purB;gbkey=Gene;gene=purB;gene_biotype=pseudogene;locus_tag=PUW38_09635;pseudo=true CP118116.1 Protein Homology CDS 1950399 1951768 . + 0 ID=cds-PUW38_09635;Parent=gene-PUW38_09635;Note=frameshifted;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=PUW38_09635;product=adenylosuccinate lyase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1951895 1952566 . + . ID=gene-PUW38_09640;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=PUW38_09640 CP118116.1 Protein Homology CDS 1951895 1952566 . + 0 ID=cds-WJG83217.1;Parent=gene-PUW38_09640;Dbxref=NCBI_GP:WJG83217.1;Name=WJG83217.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=PUW38_09640;product=two-component system response regulator PhoP;protein_id=WJG83217.1;transl_table=11 CP118116.1 Genbank pseudogene 1952566 1954027 . + . ID=gene-PUW38_09645;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=pseudogene;locus_tag=PUW38_09645;pseudo=true CP118116.1 Protein Homology CDS 1952566 1954027 . + 0 ID=cds-PUW38_09645;Parent=gene-PUW38_09645;Note=frameshifted;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=PUW38_09645;product=two-component system sensor histidine kinase PhoQ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1954108 1955229 . + . ID=gene-PUW38_09650;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=PUW38_09650 CP118116.1 Protein Homology CDS 1954108 1955229 . + 0 ID=cds-WJG82825.1;Parent=gene-PUW38_09650;Dbxref=NCBI_GP:WJG82825.1;Name=WJG82825.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=PUW38_09650;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WJG82825.1;transl_table=11 CP118116.1 Genbank gene 1955269 1956603 . - . ID=gene-PUW38_09655;Name=PUW38_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09655 CP118116.1 Protein Homology CDS 1955269 1956603 . - 0 ID=cds-WJG82826.1;Parent=gene-PUW38_09655;Dbxref=NCBI_GP:WJG82826.1;Name=WJG82826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=PUW38_09655;product=hypothetical protein;protein_id=WJG82826.1;transl_table=11 CP118116.1 Genbank gene 1956607 1957836 . - . ID=gene-PUW38_09660;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=PUW38_09660 CP118116.1 Protein Homology CDS 1956607 1957836 . - 0 ID=cds-WJG82827.1;Parent=gene-PUW38_09660;Dbxref=NCBI_GP:WJG82827.1;Name=WJG82827.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=PUW38_09660;product=peptidase T;protein_id=WJG82827.1;transl_table=11 CP118116.1 Genbank gene 1958087 1959223 . + . ID=gene-PUW38_09665;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=PUW38_09665 CP118116.1 Protein Homology CDS 1958087 1959223 . + 0 ID=cds-WJG82828.1;Parent=gene-PUW38_09665;Dbxref=NCBI_GP:WJG82828.1;Name=WJG82828.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=PUW38_09665;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WJG82828.1;transl_table=11 CP118116.1 Genbank gene 1959207 1960070 . + . ID=gene-PUW38_09670;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=PUW38_09670 CP118116.1 Protein Homology CDS 1959207 1960070 . + 0 ID=cds-WJG82829.1;Parent=gene-PUW38_09670;Dbxref=NCBI_GP:WJG82829.1;Name=WJG82829.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=PUW38_09670;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WJG82829.1;transl_table=11 CP118116.1 Genbank gene 1960399 1961409 . + . ID=gene-PUW38_09675;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=PUW38_09675 CP118116.1 Protein Homology CDS 1960399 1961409 . + 0 ID=cds-WJG82830.1;Parent=gene-PUW38_09675;Dbxref=NCBI_GP:WJG82830.1;Name=WJG82830.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=PUW38_09675;product=SPI-2 type III secretion system effector SifA;protein_id=WJG82830.1;transl_table=11 CP118116.1 Genbank gene 1961500 1961670 . + . ID=gene-PUW38_09680;Name=PUW38_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09680 CP118116.1 GeneMarkS-2+ CDS 1961500 1961670 . + 0 ID=cds-WJG82831.1;Parent=gene-PUW38_09680;Dbxref=NCBI_GP:WJG82831.1;Name=WJG82831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_09680;product=hypothetical protein;protein_id=WJG82831.1;transl_table=11 CP118116.1 Genbank gene 1961726 1962505 . + . ID=gene-PUW38_09685;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=PUW38_09685 CP118116.1 Protein Homology CDS 1961726 1962505 . + 0 ID=cds-WJG82832.1;Parent=gene-PUW38_09685;Dbxref=NCBI_GP:WJG82832.1;Name=WJG82832.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=PUW38_09685;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WJG82832.1;transl_table=11 CP118116.1 Genbank gene 1962530 1963576 . + . ID=gene-PUW38_09690;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=PUW38_09690 CP118116.1 Protein Homology CDS 1962530 1963576 . + 0 ID=cds-WJG82833.1;Parent=gene-PUW38_09690;Dbxref=NCBI_GP:WJG82833.1;Name=WJG82833.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=PUW38_09690;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WJG82833.1;transl_table=11 CP118116.1 Genbank gene 1963658 1964479 . - . ID=gene-PUW38_09695;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=PUW38_09695 CP118116.1 Protein Homology CDS 1963658 1964479 . - 0 ID=cds-WJG82834.1;Parent=gene-PUW38_09695;Dbxref=NCBI_GP:WJG82834.1;Name=WJG82834.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=PUW38_09695;product=NAD-dependent protein deacylase;protein_id=WJG82834.1;transl_table=11 CP118116.1 Genbank gene 1964498 1965409 . - . ID=gene-PUW38_09700;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=PUW38_09700 CP118116.1 Protein Homology CDS 1964498 1965409 . - 0 ID=cds-WJG82835.1;Parent=gene-PUW38_09700;Dbxref=NCBI_GP:WJG82835.1;Name=WJG82835.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=PUW38_09700;product=N-acetylglucosamine kinase;protein_id=WJG82835.1;transl_table=11 CP118116.1 Genbank gene 1965438 1966682 . - . ID=gene-PUW38_09705;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=PUW38_09705 CP118116.1 Protein Homology CDS 1965438 1966682 . - 0 ID=cds-WJG82836.1;Parent=gene-PUW38_09705;Dbxref=NCBI_GP:WJG82836.1;Name=WJG82836.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=PUW38_09705;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WJG82836.1;transl_table=11 CP118116.1 Genbank gene 1966682 1967383 . - . ID=gene-PUW38_09710;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=PUW38_09710 CP118116.1 Protein Homology CDS 1966682 1967383 . - 0 ID=cds-WJG82837.1;Parent=gene-PUW38_09710;Dbxref=NCBI_GP:WJG82837.1;Name=WJG82837.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=PUW38_09710;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WJG82837.1;transl_table=11 CP118116.1 Genbank gene 1967376 1968575 . - . ID=gene-PUW38_09715;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=PUW38_09715 CP118116.1 Protein Homology CDS 1967376 1968575 . - 0 ID=cds-WJG82838.1;Parent=gene-PUW38_09715;Dbxref=NCBI_GP:WJG82838.1;Name=WJG82838.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=PUW38_09715;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WJG82838.1;transl_table=11 CP118116.1 Genbank gene 1968913 1972359 . + . ID=gene-PUW38_09720;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=PUW38_09720 CP118116.1 Protein Homology CDS 1968913 1972359 . + 0 ID=cds-WJG82839.1;Parent=gene-PUW38_09720;Dbxref=NCBI_GP:WJG82839.1;Name=WJG82839.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=PUW38_09720;product=transcription-repair coupling factor;protein_id=WJG82839.1;transl_table=11 CP118116.1 Genbank gene 1972507 1973472 . + . ID=gene-PUW38_09725;Name=PUW38_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09725 CP118116.1 Protein Homology CDS 1972507 1973472 . + 0 ID=cds-WJG82840.1;Parent=gene-PUW38_09725;Dbxref=NCBI_GP:WJG82840.1;Name=WJG82840.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=PUW38_09725;product=L%2CD-transpeptidase family protein;protein_id=WJG82840.1;transl_table=11 CP118116.1 Genbank gene 1973569 1973826 . - . ID=gene-PUW38_09730;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ycfR;locus_tag=PUW38_09730 CP118116.1 Protein Homology CDS 1973569 1973826 . - 0 ID=cds-WJG82841.1;Parent=gene-PUW38_09730;Dbxref=NCBI_GP:WJG82841.1;Name=WJG82841.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=PUW38_09730;product=multiple stress resistance protein BhsA;protein_id=WJG82841.1;transl_table=11 CP118116.1 Genbank gene 1974068 1974703 . + . ID=gene-PUW38_09735;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=PUW38_09735 CP118116.1 Protein Homology CDS 1974068 1974703 . + 0 ID=cds-WJG82842.1;Parent=gene-PUW38_09735;Dbxref=NCBI_GP:WJG82842.1;Name=WJG82842.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=PUW38_09735;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WJG82842.1;transl_table=11 CP118116.1 Genbank pseudogene 1974777 1975293 . - . ID=gene-PUW38_09740;Name=PUW38_09740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09740;pseudo=true CP118116.1 Protein Homology CDS 1974777 1975293 . - 0 ID=cds-PUW38_09740;Parent=gene-PUW38_09740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=PUW38_09740;product=glycine zipper 2TM domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 1975472 1976776 . - . ID=gene-PUW38_09745;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=PUW38_09745 CP118116.1 Protein Homology CDS 1975472 1976776 . - 0 ID=cds-WJG82843.1;Parent=gene-PUW38_09745;Dbxref=NCBI_GP:WJG82843.1;Name=WJG82843.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=PUW38_09745;product=NADH-quinone dehydrogenase;protein_id=WJG82843.1;transl_table=11 CP118116.1 Genbank gene 1977031 1977573 . - . ID=gene-PUW38_09750;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=PUW38_09750 CP118116.1 Protein Homology CDS 1977031 1977573 . - 0 ID=cds-WJG82844.1;Parent=gene-PUW38_09750;Dbxref=NCBI_GP:WJG82844.1;Name=WJG82844.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=PUW38_09750;product=alpha/beta hydrolase YcfP;protein_id=WJG82844.1;transl_table=11 CP118116.1 Genbank gene 1977598 1978623 . - . ID=gene-PUW38_09755;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=PUW38_09755 CP118116.1 Protein Homology CDS 1977598 1978623 . - 0 ID=cds-WJG82845.1;Parent=gene-PUW38_09755;Dbxref=NCBI_GP:WJG82845.1;Name=WJG82845.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=PUW38_09755;product=beta-N-acetylhexosaminidase;protein_id=WJG82845.1;transl_table=11 CP118116.1 Genbank gene 1978634 1979458 . - . ID=gene-PUW38_09760;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=PUW38_09760 CP118116.1 Protein Homology CDS 1978634 1979458 . - 0 ID=cds-WJG82846.1;Parent=gene-PUW38_09760;Dbxref=NCBI_GP:WJG82846.1;Name=WJG82846.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=PUW38_09760;product=thiamine kinase;protein_id=WJG82846.1;transl_table=11 CP118116.1 Genbank gene 1979439 1980077 . - . ID=gene-PUW38_09765;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=PUW38_09765 CP118116.1 Protein Homology CDS 1979439 1980077 . - 0 ID=cds-WJG82847.1;Parent=gene-PUW38_09765;Dbxref=NCBI_GP:WJG82847.1;Name=WJG82847.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=PUW38_09765;product=penicillin-binding protein activator LpoB;protein_id=WJG82847.1;transl_table=11 CP118116.1 Genbank gene 1980091 1980465 . - . ID=gene-PUW38_09770;Name=PUW38_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09770 CP118116.1 Protein Homology CDS 1980091 1980465 . - 0 ID=cds-WJG82848.1;Parent=gene-PUW38_09770;Dbxref=NCBI_GP:WJG82848.1;Name=WJG82848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=PUW38_09770;product=YcfL family protein;protein_id=WJG82848.1;transl_table=11 CP118116.1 Genbank gene 1980468 1980827 . - . ID=gene-PUW38_09775;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=PUW38_09775 CP118116.1 Protein Homology CDS 1980468 1980827 . - 0 ID=cds-WJG82849.1;Parent=gene-PUW38_09775;Dbxref=NCBI_GP:WJG82849.1;Name=WJG82849.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=PUW38_09775;product=purine nucleoside phosphoramidase;protein_id=WJG82849.1;transl_table=11 CP118116.1 Genbank gene 1981169 1983343 . + . ID=gene-PUW38_09780;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=PUW38_09780 CP118116.1 Protein Homology CDS 1981169 1983343 . + 0 ID=cds-WJG82850.1;Parent=gene-PUW38_09780;Dbxref=NCBI_GP:WJG82850.1;Name=WJG82850.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=PUW38_09780;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WJG82850.1;transl_table=11 CP118116.1 Genbank gene 1983428 1984861 . - . ID=gene-PUW38_09785;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=PUW38_09785 CP118116.1 Protein Homology CDS 1983428 1984861 . - 0 ID=cds-WJG82851.1;Parent=gene-PUW38_09785;Dbxref=NCBI_GP:WJG82851.1;Name=WJG82851.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=PUW38_09785;product=PTS glucose transporter subunit IIBC;protein_id=WJG82851.1;transl_table=11 CP118116.1 Genbank gene 1985156 1985953 . - . ID=gene-PUW38_09790;Name=PUW38_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09790 CP118116.1 Protein Homology CDS 1985156 1985953 . - 0 ID=cds-WJG82852.1;Parent=gene-PUW38_09790;Dbxref=NCBI_GP:WJG82852.1;Name=WJG82852.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=PUW38_09790;product=metal-dependent hydrolase;protein_id=WJG82852.1;transl_table=11 CP118116.1 Genbank gene 1985964 1986968 . - . ID=gene-PUW38_09795;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=PUW38_09795 CP118116.1 Protein Homology CDS 1985964 1986968 . - 0 ID=cds-WJG82853.1;Parent=gene-PUW38_09795;Dbxref=NCBI_GP:WJG82853.1;Name=WJG82853.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=PUW38_09795;product=DNA polymerase III subunit delta';protein_id=WJG82853.1;transl_table=11 CP118116.1 Genbank gene 1986965 1987606 . - . ID=gene-PUW38_09800;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=PUW38_09800 CP118116.1 Protein Homology CDS 1986965 1987606 . - 0 ID=cds-WJG82854.1;Parent=gene-PUW38_09800;Dbxref=NCBI_GP:WJG82854.1;Name=WJG82854.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=PUW38_09800;product=dTMP kinase;protein_id=WJG82854.1;transl_table=11 CP118116.1 Genbank gene 1987596 1988618 . - . ID=gene-PUW38_09805;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=PUW38_09805 CP118116.1 Protein Homology CDS 1987596 1988618 . - 0 ID=cds-WJG82855.1;Parent=gene-PUW38_09805;Dbxref=NCBI_GP:WJG82855.1;Name=WJG82855.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=PUW38_09805;product=cell division protein YceG;protein_id=WJG82855.1;transl_table=11 CP118116.1 Genbank gene 1988621 1989430 . - . ID=gene-PUW38_09810;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=PUW38_09810 CP118116.1 Protein Homology CDS 1988621 1989430 . - 0 ID=cds-WJG82856.1;Parent=gene-PUW38_09810;Dbxref=NCBI_GP:WJG82856.1;Name=WJG82856.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=PUW38_09810;product=aminodeoxychorismate lyase;protein_id=WJG82856.1;transl_table=11 CP118116.1 Genbank gene 1989554 1990795 . - . ID=gene-PUW38_09815;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=PUW38_09815 CP118116.1 Protein Homology CDS 1989554 1990795 . - 0 ID=cds-WJG82857.1;Parent=gene-PUW38_09815;Dbxref=NCBI_GP:WJG82857.1;Name=WJG82857.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=PUW38_09815;product=beta-ketoacyl-ACP synthase II;protein_id=WJG82857.1;transl_table=11 CP118116.1 Genbank gene 1990881 1991117 . - . ID=gene-PUW38_09820;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=PUW38_09820 CP118116.1 Protein Homology CDS 1990881 1991117 . - 0 ID=cds-WJG82858.1;Parent=gene-PUW38_09820;Dbxref=NCBI_GP:WJG82858.1;Name=WJG82858.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=PUW38_09820;product=acyl carrier protein;protein_id=WJG82858.1;transl_table=11 CP118116.1 Genbank gene 1991273 1992007 . - . ID=gene-PUW38_09825;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PUW38_09825 CP118116.1 Protein Homology CDS 1991273 1992007 . - 0 ID=cds-WJG82859.1;Parent=gene-PUW38_09825;Dbxref=NCBI_GP:WJG82859.1;Name=WJG82859.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=PUW38_09825;product=3-oxoacyl-ACP reductase FabG;protein_id=WJG82859.1;transl_table=11 CP118116.1 Genbank gene 1992020 1992949 . - . ID=gene-PUW38_09830;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=PUW38_09830 CP118116.1 Protein Homology CDS 1992020 1992949 . - 0 ID=cds-WJG82860.1;Parent=gene-PUW38_09830;Dbxref=NCBI_GP:WJG82860.1;Name=WJG82860.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=PUW38_09830;product=ACP S-malonyltransferase;protein_id=WJG82860.1;transl_table=11 CP118116.1 Genbank gene 1992965 1993918 . - . ID=gene-PUW38_09835;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=PUW38_09835 CP118116.1 Protein Homology CDS 1992965 1993918 . - 0 ID=cds-WJG82861.1;Parent=gene-PUW38_09835;Dbxref=NCBI_GP:WJG82861.1;Name=WJG82861.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=PUW38_09835;product=beta-ketoacyl-ACP synthase III;protein_id=WJG82861.1;transl_table=11 CP118116.1 Genbank gene 1993998 1995077 . - . ID=gene-PUW38_09840;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=PUW38_09840 CP118116.1 Protein Homology CDS 1993998 1995077 . - 0 ID=cds-WJG82862.1;Parent=gene-PUW38_09840;Dbxref=NCBI_GP:WJG82862.1;Name=WJG82862.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=PUW38_09840;product=phosphate acyltransferase PlsX;protein_id=WJG82862.1;transl_table=11 CP118116.1 Genbank gene 1995211 1995384 . - . ID=gene-PUW38_09845;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=PUW38_09845 CP118116.1 Protein Homology CDS 1995211 1995384 . - 0 ID=cds-WJG82863.1;Parent=gene-PUW38_09845;Dbxref=NCBI_GP:WJG82863.1;Name=WJG82863.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=PUW38_09845;product=50S ribosomal protein L32;protein_id=WJG82863.1;transl_table=11 CP118116.1 Genbank gene 1995436 1995957 . - . ID=gene-PUW38_09850;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=PUW38_09850 CP118116.1 Protein Homology CDS 1995436 1995957 . - 0 ID=cds-WJG82864.1;Parent=gene-PUW38_09850;Dbxref=NCBI_GP:WJG82864.1;Name=WJG82864.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=PUW38_09850;product=23S rRNA accumulation protein YceD;protein_id=WJG82864.1;transl_table=11 CP118116.1 Genbank gene 1996155 1996739 . + . ID=gene-PUW38_09855;Name=PUW38_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09855 CP118116.1 Protein Homology CDS 1996155 1996739 . + 0 ID=cds-WJG82865.1;Parent=gene-PUW38_09855;Dbxref=NCBI_GP:WJG82865.1;Name=WJG82865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=PUW38_09855;product=Maf family protein;protein_id=WJG82865.1;transl_table=11 CP118116.1 Genbank gene 1996810 1997034 . - . ID=gene-PUW38_09860;Name=PUW38_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09860 CP118116.1 GeneMarkS-2+ CDS 1996810 1997034 . - 0 ID=cds-WJG82866.1;Parent=gene-PUW38_09860;Dbxref=NCBI_GP:WJG82866.1;Name=WJG82866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_09860;product=hypothetical protein;protein_id=WJG82866.1;transl_table=11 CP118116.1 Genbank gene 1997237 1997980 . - . ID=gene-PUW38_09865;Name=PUW38_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09865 CP118116.1 Protein Homology CDS 1997237 1997980 . - 0 ID=cds-WJG83218.1;Parent=gene-PUW38_09865;Dbxref=NCBI_GP:WJG83218.1;Name=WJG83218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=PUW38_09865;product=DUF3053 domain-containing protein;protein_id=WJG83218.1;transl_table=11 CP118116.1 Genbank gene 1998136 1999095 . - . ID=gene-PUW38_09870;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=PUW38_09870 CP118116.1 Protein Homology CDS 1998136 1999095 . - 0 ID=cds-WJG82867.1;Parent=gene-PUW38_09870;Dbxref=NCBI_GP:WJG82867.1;Name=WJG82867.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=PUW38_09870;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WJG82867.1;transl_table=11 CP118116.1 Genbank pseudogene 1999669 2002874 . + . ID=gene-PUW38_09875;Name=rne;gbkey=Gene;gene=rne;gene_biotype=pseudogene;locus_tag=PUW38_09875;pseudo=true CP118116.1 Protein Homology CDS 1999669 2002874 . + 0 ID=cds-PUW38_09875;Parent=gene-PUW38_09875;Note=frameshifted;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=PUW38_09875;product=ribonuclease E;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2003120 2004073 . - . ID=gene-PUW38_09880;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=PUW38_09880 CP118116.1 Protein Homology CDS 2003120 2004073 . - 0 ID=cds-WJG82868.1;Parent=gene-PUW38_09880;Dbxref=NCBI_GP:WJG82868.1;Name=WJG82868.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=PUW38_09880;product=flagellar hook-associated protein FlgL;protein_id=WJG82868.1;transl_table=11 CP118116.1 Genbank pseudogene 2004088 2005749 . - . ID=gene-PUW38_09885;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=pseudogene;locus_tag=PUW38_09885;pseudo=true CP118116.1 Protein Homology CDS 2004088 2005749 . - 0 ID=cds-PUW38_09885;Parent=gene-PUW38_09885;Note=internal stop;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=PUW38_09885;product=flagellar hook-associated protein FlgK;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2005814 2006764 . - . ID=gene-PUW38_09890;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=PUW38_09890 CP118116.1 Protein Homology CDS 2005814 2006764 . - 0 ID=cds-WJG82869.1;Parent=gene-PUW38_09890;Dbxref=NCBI_GP:WJG82869.1;Name=WJG82869.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=PUW38_09890;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WJG82869.1;transl_table=11 CP118116.1 Genbank pseudogene 2006764 2007861 . - . ID=gene-PUW38_09895;Name=PUW38_09895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09895;pseudo=true CP118116.1 Protein Homology CDS 2006764 2007861 . - 0 ID=cds-PUW38_09895;Parent=gene-PUW38_09895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=PUW38_09895;product=flagellar basal body P-ring protein FlgI;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2007873 2008571 . - . ID=gene-PUW38_09900;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=PUW38_09900 CP118116.1 Protein Homology CDS 2007873 2008571 . - 0 ID=cds-WJG82870.1;Parent=gene-PUW38_09900;Dbxref=NCBI_GP:WJG82870.1;Name=WJG82870.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=PUW38_09900;product=flagellar basal body L-ring protein FlgH;protein_id=WJG82870.1;transl_table=11 CP118116.1 Genbank gene 2008626 2009408 . - . ID=gene-PUW38_09905;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=PUW38_09905 CP118116.1 Protein Homology CDS 2008626 2009408 . - 0 ID=cds-WJG82871.1;Parent=gene-PUW38_09905;Dbxref=NCBI_GP:WJG82871.1;Name=WJG82871.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=PUW38_09905;product=flagellar basal-body rod protein FlgG;protein_id=WJG82871.1;transl_table=11 CP118116.1 Genbank gene 2009422 2010177 . - . ID=gene-PUW38_09910;Name=PUW38_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09910 CP118116.1 Protein Homology CDS 2009422 2010177 . - 0 ID=cds-WJG82872.1;Parent=gene-PUW38_09910;Dbxref=NCBI_GP:WJG82872.1;Name=WJG82872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=PUW38_09910;product=flagellar basal body rod protein FlgF;protein_id=WJG82872.1;transl_table=11 CP118116.1 Genbank gene 2010198 2011409 . - . ID=gene-PUW38_09915;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=PUW38_09915 CP118116.1 Protein Homology CDS 2010198 2011409 . - 0 ID=cds-WJG82873.1;Parent=gene-PUW38_09915;Dbxref=NCBI_GP:WJG82873.1;Name=WJG82873.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=PUW38_09915;product=flagellar hook protein FlgE;protein_id=WJG82873.1;transl_table=11 CP118116.1 Genbank gene 2011436 2012134 . - . ID=gene-PUW38_09920;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=PUW38_09920 CP118116.1 Protein Homology CDS 2011436 2012134 . - 0 ID=cds-WJG82874.1;Parent=gene-PUW38_09920;Dbxref=NCBI_GP:WJG82874.1;Name=WJG82874.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=PUW38_09920;product=flagellar hook assembly protein FlgD;protein_id=WJG82874.1;transl_table=11 CP118116.1 Genbank gene 2012146 2012550 . - . ID=gene-PUW38_09925;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=PUW38_09925 CP118116.1 Protein Homology CDS 2012146 2012550 . - 0 ID=cds-WJG82875.1;Parent=gene-PUW38_09925;Dbxref=NCBI_GP:WJG82875.1;Name=WJG82875.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=PUW38_09925;product=flagellar basal body rod protein FlgC;protein_id=WJG82875.1;transl_table=11 CP118116.1 Genbank gene 2012554 2012970 . - . ID=gene-PUW38_09930;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=PUW38_09930 CP118116.1 Protein Homology CDS 2012554 2012970 . - 0 ID=cds-WJG82876.1;Parent=gene-PUW38_09930;Dbxref=NCBI_GP:WJG82876.1;Name=WJG82876.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=PUW38_09930;product=flagellar basal body rod protein FlgB;protein_id=WJG82876.1;transl_table=11 CP118116.1 Genbank gene 2013127 2013786 . + . ID=gene-PUW38_09935;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=PUW38_09935 CP118116.1 Protein Homology CDS 2013127 2013786 . + 0 ID=cds-WJG82877.1;Parent=gene-PUW38_09935;Dbxref=NCBI_GP:WJG82877.1;Name=WJG82877.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=PUW38_09935;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WJG82877.1;transl_table=11 CP118116.1 Genbank gene 2013878 2014171 . + . ID=gene-PUW38_09940;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=PUW38_09940 CP118116.1 Protein Homology CDS 2013878 2014171 . + 0 ID=cds-WJG82878.1;Parent=gene-PUW38_09940;Dbxref=NCBI_GP:WJG82878.1;Name=WJG82878.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=PUW38_09940;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WJG82878.1;transl_table=11 CP118116.1 Genbank gene 2014176 2014598 . + . ID=gene-PUW38_09945;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=PUW38_09945 CP118116.1 Protein Homology CDS 2014176 2014598 . + 0 ID=cds-WJG82879.1;Parent=gene-PUW38_09945;Dbxref=NCBI_GP:WJG82879.1;Name=WJG82879.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=PUW38_09945;product=flagella biosynthesis chaperone FlgN;protein_id=WJG82879.1;transl_table=11 CP118116.1 Genbank gene 2014680 2016215 . - . ID=gene-PUW38_09950;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=PUW38_09950 CP118116.1 Protein Homology CDS 2014680 2016215 . - 0 ID=cds-WJG82880.1;Parent=gene-PUW38_09950;Dbxref=NCBI_GP:WJG82880.1;Name=WJG82880.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=PUW38_09950;product=murein biosynthesis integral membrane protein MurJ;protein_id=WJG82880.1;transl_table=11 CP118116.1 Genbank gene 2016519 2017442 . - . ID=gene-PUW38_09955;Name=PUW38_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_09955 CP118116.1 Protein Homology CDS 2016519 2017442 . - 0 ID=cds-WJG82881.1;Parent=gene-PUW38_09955;Dbxref=NCBI_GP:WJG82881.1;Name=WJG82881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=PUW38_09955;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WJG82881.1;transl_table=11 CP118116.1 Genbank pseudogene 2017444 2018090 . - . ID=gene-PUW38_09960;Name=PUW38_09960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09960;pseudo=true CP118116.1 Protein Homology CDS 2017444 2018090 . - 0 ID=cds-PUW38_09960;Parent=gene-PUW38_09960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=PUW38_09960;product=YceH family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2018126 2018710 . - . ID=gene-PUW38_09965;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=PUW38_09965 CP118116.1 Protein Homology CDS 2018126 2018710 . - 0 ID=cds-WJG82882.1;Parent=gene-PUW38_09965;Dbxref=NCBI_GP:WJG82882.1;Name=WJG82882.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=PUW38_09965;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WJG82882.1;transl_table=11 CP118116.1 Genbank gene 2018947 2020155 . + . ID=gene-PUW38_09970;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=PUW38_09970 CP118116.1 Protein Homology CDS 2018947 2020155 . + 0 ID=cds-WJG82883.1;Parent=gene-PUW38_09970;Dbxref=NCBI_GP:WJG82883.1;Name=WJG82883.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=PUW38_09970;product=multidrug efflux MFS transporter MdtH;protein_id=WJG82883.1;transl_table=11 CP118116.1 Genbank pseudogene 2020219 2020865 . + . ID=gene-PUW38_09975;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=pseudogene;locus_tag=PUW38_09975;pseudo=true CP118116.1 Protein Homology CDS 2020219 2020865 . + 0 ID=cds-PUW38_09975;Parent=gene-PUW38_09975;Note=frameshifted;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=PUW38_09975;product=glutaredoxin 2;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2021006 2021551 . + . ID=gene-PUW38_09980;Name=PUW38_09980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_09980;pseudo=true CP118116.1 Protein Homology CDS 2021006 2021551 . + 0 ID=cds-PUW38_09980;Parent=gene-PUW38_09980;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=PUW38_09980;product=lipoprotein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2021656 2022702 . + . ID=gene-PUW38_09985;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=PUW38_09985 CP118116.1 Protein Homology CDS 2021656 2022702 . + 0 ID=cds-WJG82884.1;Parent=gene-PUW38_09985;Dbxref=NCBI_GP:WJG82884.1;Name=WJG82884.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=PUW38_09985;product=dihydroorotase;protein_id=WJG82884.1;transl_table=11 CP118116.1 Genbank gene 2022776 2023021 . + . ID=gene-PUW38_09990;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=PUW38_09990 CP118116.1 Protein Homology CDS 2022776 2023021 . + 0 ID=cds-WJG82885.1;Parent=gene-PUW38_09990;Dbxref=NCBI_GP:WJG82885.1;Name=WJG82885.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=PUW38_09990;product=DNA damage-inducible protein I;protein_id=WJG82885.1;transl_table=11 CP118116.1 Genbank gene 2023311 2023565 . + . ID=gene-PUW38_09995;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=PUW38_09995 CP118116.1 Protein Homology CDS 2023311 2023565 . + 0 ID=cds-WJG83219.1;Parent=gene-PUW38_09995;Dbxref=NCBI_GP:WJG83219.1;Name=WJG83219.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=PUW38_09995;product=biofilm formation regulator BssS;protein_id=WJG83219.1;transl_table=11 CP118116.1 Genbank gene 2023678 2024796 . + . ID=gene-PUW38_10000;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=PUW38_10000 CP118116.1 Protein Homology CDS 2023678 2024796 . + 0 ID=cds-WJG82886.1;Parent=gene-PUW38_10000;Dbxref=NCBI_GP:WJG82886.1;Name=WJG82886.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=PUW38_10000;product=N-methyl-L-tryptophan oxidase;protein_id=WJG82886.1;transl_table=11 CP118116.1 Genbank gene 2024837 2024950 . + . ID=gene-PUW38_10005;Name=PUW38_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10005 CP118116.1 Protein Homology CDS 2024837 2024950 . + 0 ID=cds-WJG82887.1;Parent=gene-PUW38_10005;Dbxref=NCBI_GP:WJG82887.1;Name=WJG82887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=PUW38_10005;product=YceO family protein;protein_id=WJG82887.1;transl_table=11 CP118116.1 Genbank gene 2025213 2025785 . + . ID=gene-PUW38_10010;Name=PUW38_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10010 CP118116.1 Protein Homology CDS 2025213 2025785 . + 0 ID=cds-WJG82888.1;Parent=gene-PUW38_10010;Dbxref=NCBI_GP:WJG82888.1;Name=WJG82888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=PUW38_10010;product=cytochrome b;protein_id=WJG82888.1;transl_table=11 CP118116.1 Genbank gene 2025782 2026357 . + . ID=gene-PUW38_10015;Name=PUW38_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10015 CP118116.1 Protein Homology CDS 2025782 2026357 . + 0 ID=cds-WJG82889.1;Parent=gene-PUW38_10015;Dbxref=NCBI_GP:WJG82889.1;Name=WJG82889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=PUW38_10015;product=YceI family protein;protein_id=WJG82889.1;transl_table=11 CP118116.1 Genbank gene 2026409 2027461 . - . ID=gene-PUW38_10020;Name=PUW38_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10020 CP118116.1 Protein Homology CDS 2026409 2027461 . - 0 ID=cds-WJG82890.1;Parent=gene-PUW38_10020;Dbxref=NCBI_GP:WJG82890.1;Name=WJG82890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=PUW38_10020;product=rhodanese-related sulfurtransferase;protein_id=WJG82890.1;transl_table=11 CP118116.1 Genbank gene 2027681 2028601 . + . ID=gene-PUW38_10025;Name=PUW38_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10025 CP118116.1 Protein Homology CDS 2027681 2028601 . + 0 ID=cds-WJG82891.1;Parent=gene-PUW38_10025;Dbxref=NCBI_GP:WJG82891.1;Name=WJG82891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=PUW38_10025;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WJG82891.1;transl_table=11 CP118116.1 Genbank gene 2028756 2029970 . + . ID=gene-PUW38_10030;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=PUW38_10030 CP118116.1 Protein Homology CDS 2028756 2029970 . + 0 ID=cds-WJG82892.1;Parent=gene-PUW38_10030;Dbxref=NCBI_GP:WJG82892.1;Name=WJG82892.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=PUW38_10030;product=multidrug efflux MFS transporter MdtG;protein_id=WJG82892.1;transl_table=11 CP118116.1 Genbank gene 2030052 2030426 . + . ID=gene-PUW38_10035;Name=PUW38_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10035 CP118116.1 Protein Homology CDS 2030052 2030426 . + 0 ID=cds-WJG82893.1;Parent=gene-PUW38_10035;Dbxref=NCBI_GP:WJG82893.1;Name=WJG82893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=PUW38_10035;product=MysB family protein;protein_id=WJG82893.1;transl_table=11 CP118116.1 Genbank gene 2030427 2030654 . - . ID=gene-PUW38_10040;Name=PUW38_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10040 CP118116.1 Protein Homology CDS 2030427 2030654 . - 0 ID=cds-WJG82894.1;Parent=gene-PUW38_10040;Dbxref=NCBI_GP:WJG82894.1;Name=WJG82894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=PUW38_10040;product=YceK/YidQ family lipoprotein;protein_id=WJG82894.1;transl_table=11 CP118116.1 Genbank gene 2030728 2033271 . - . ID=gene-PUW38_10045;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=PUW38_10045 CP118116.1 Protein Homology CDS 2030728 2033271 . - 0 ID=cds-WJG82895.1;Parent=gene-PUW38_10045;Dbxref=NCBI_GP:WJG82895.1;Name=WJG82895.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=PUW38_10045;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WJG82895.1;transl_table=11 CP118116.1 Genbank gene 2033264 2034799 . - . ID=gene-PUW38_10050;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=PUW38_10050 CP118116.1 Protein Homology CDS 2033264 2034799 . - 0 ID=cds-WJG82896.1;Parent=gene-PUW38_10050;Dbxref=NCBI_GP:WJG82896.1;Name=WJG82896.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=PUW38_10050;product=glucans biosynthesis protein MdoG;protein_id=WJG82896.1;transl_table=11 CP118116.1 Genbank gene 2035071 2036225 . + . ID=gene-PUW38_10055;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=PUW38_10055 CP118116.1 Protein Homology CDS 2035071 2036225 . + 0 ID=cds-WJG82897.1;Parent=gene-PUW38_10055;Dbxref=NCBI_GP:WJG82897.1;Name=WJG82897.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=PUW38_10055;product=glucans biosynthesis protein MdoC;protein_id=WJG82897.1;transl_table=11 CP118116.1 Genbank gene 2036242 2037729 . - . ID=gene-PUW38_10060;Name=PUW38_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10060 CP118116.1 Protein Homology CDS 2036242 2037729 . - 0 ID=cds-WJG82898.1;Parent=gene-PUW38_10060;Dbxref=NCBI_GP:WJG82898.1;Name=WJG82898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=PUW38_10060;product=phospholipase D family protein;protein_id=WJG82898.1;transl_table=11 CP118116.1 Genbank gene 2037665 2038204 . - . ID=gene-PUW38_10065;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=PUW38_10065 CP118116.1 Protein Homology CDS 2037665 2038204 . - 0 ID=cds-WJG82899.1;Parent=gene-PUW38_10065;Dbxref=NCBI_GP:WJG82899.1;Name=WJG82899.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=PUW38_10065;product=O-acetyl-ADP-ribose deacetylase;protein_id=WJG82899.1;transl_table=11 CP118116.1 Genbank gene 2038291 2038611 . - . ID=gene-PUW38_10070;Name=PUW38_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10070 CP118116.1 Protein Homology CDS 2038291 2038611 . - 0 ID=cds-WJG82900.1;Parent=gene-PUW38_10070;Dbxref=NCBI_GP:WJG82900.1;Name=WJG82900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=PUW38_10070;product=type 1 fimbrial protein;protein_id=WJG82900.1;transl_table=11 CP118116.1 Genbank gene 2038742 2039068 . - . ID=gene-PUW38_10075;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=PUW38_10075 CP118116.1 Protein Homology CDS 2038742 2039068 . - 0 ID=cds-WJG82901.1;Parent=gene-PUW38_10075;Dbxref=NCBI_GP:WJG82901.1;Name=WJG82901.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=PUW38_10075;product=curli assembly chaperone CsgC;protein_id=WJG82901.1;transl_table=11 CP118116.1 Genbank gene 2039130 2039585 . - . ID=gene-PUW38_10080;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=PUW38_10080 CP118116.1 Protein Homology CDS 2039130 2039585 . - 0 ID=cds-WJG82902.1;Parent=gene-PUW38_10080;Dbxref=NCBI_GP:WJG82902.1;Name=WJG82902.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=PUW38_10080;product=curli major subunit CsgA;protein_id=WJG82902.1;transl_table=11 CP118116.1 Genbank gene 2039627 2040082 . - . ID=gene-PUW38_10085;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=PUW38_10085 CP118116.1 Protein Homology CDS 2039627 2040082 . - 0 ID=cds-WJG82903.1;Parent=gene-PUW38_10085;Dbxref=NCBI_GP:WJG82903.1;Name=WJG82903.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=PUW38_10085;product=curli minor subunit CsgB;protein_id=WJG82903.1;transl_table=11 CP118116.1 Genbank gene 2040836 2041486 . + . ID=gene-PUW38_10090;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=PUW38_10090 CP118116.1 Protein Homology CDS 2040836 2041486 . + 0 ID=cds-WJG82904.1;Parent=gene-PUW38_10090;Dbxref=NCBI_GP:WJG82904.1;Name=WJG82904.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=PUW38_10090;product=biofilm master transcriptional regulator CsgD;protein_id=WJG82904.1;transl_table=11 CP118116.1 Genbank gene 2041491 2041886 . + . ID=gene-PUW38_10095;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=PUW38_10095 CP118116.1 Protein Homology CDS 2041491 2041886 . + 0 ID=cds-WJG82905.1;Parent=gene-PUW38_10095;Dbxref=NCBI_GP:WJG82905.1;Name=WJG82905.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=PUW38_10095;product=curli production assembly/transport protein CsgE;protein_id=WJG82905.1;transl_table=11 CP118116.1 Genbank gene 2041913 2042329 . + . ID=gene-PUW38_10100;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=PUW38_10100 CP118116.1 Protein Homology CDS 2041913 2042329 . + 0 ID=cds-WJG82906.1;Parent=gene-PUW38_10100;Dbxref=NCBI_GP:WJG82906.1;Name=WJG82906.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=PUW38_10100;product=curli production assembly/transport protein CsgF;protein_id=WJG82906.1;transl_table=11 CP118116.1 Genbank gene 2042356 2043189 . + . ID=gene-PUW38_10105;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=PUW38_10105 CP118116.1 Protein Homology CDS 2042356 2043189 . + 0 ID=cds-WJG82907.1;Parent=gene-PUW38_10105;Dbxref=NCBI_GP:WJG82907.1;Name=WJG82907.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=PUW38_10105;product=curli production assembly/transport protein CsgG;protein_id=WJG82907.1;transl_table=11 CP118116.1 Genbank gene 2043228 2043710 . - . ID=gene-PUW38_10110;Name=PUW38_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10110 CP118116.1 Protein Homology CDS 2043228 2043710 . - 0 ID=cds-WJG82908.1;Parent=gene-PUW38_10110;Dbxref=NCBI_GP:WJG82908.1;Name=WJG82908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=PUW38_10110;product=DUF1097 domain-containing protein;protein_id=WJG82908.1;transl_table=11 CP118116.1 Genbank pseudogene 2043811 2044308 . - . ID=gene-PUW38_10115;Name=PUW38_10115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10115;pseudo=true CP118116.1 Protein Homology CDS 2043811 2044308 . - 0 ID=cds-PUW38_10115;Parent=gene-PUW38_10115;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=PUW38_10115;product=molecular chaperone;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2044305 2044394 . - . ID=gene-PUW38_10120;Name=PUW38_10120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10120;pseudo=true CP118116.1 Protein Homology CDS 2044305 2044394 . - 0 ID=cds-PUW38_10120;Parent=gene-PUW38_10120;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=PUW38_10120;product=phosphatase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2044479 2045416 . - . ID=gene-PUW38_10125;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=pseudogene;locus_tag=PUW38_10125;pseudo=true CP118116.1 Protein Homology CDS 2044479 2045416 . - 0 ID=cds-PUW38_10125;Parent=gene-PUW38_10125;Note=frameshifted;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=PUW38_10125;product=glyoxylate/hydroxypyruvate reductase GhrA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2045651 2045737 . + . ID=gene-PUW38_10130;Name=PUW38_10130;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_10130 CP118116.1 tRNAscan-SE tRNA 2045651 2045737 . + . ID=rna-PUW38_10130;Parent=gene-PUW38_10130;anticodon=(pos:2045685..2045687);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10130;product=tRNA-Ser CP118116.1 tRNAscan-SE exon 2045651 2045737 . + . ID=exon-PUW38_10130-1;Parent=rna-PUW38_10130;anticodon=(pos:2045685..2045687);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10130;product=tRNA-Ser CP118116.1 Genbank gene 2045787 2045994 . + . ID=gene-PUW38_10135;Name=PUW38_10135;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW38_10135 CP118116.1 cmsearch ncRNA 2045787 2045994 . + . ID=rna-PUW38_10135;Parent=gene-PUW38_10135;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_10135;product=RtT sRNA CP118116.1 cmsearch exon 2045787 2045994 . + . ID=exon-PUW38_10135-1;Parent=rna-PUW38_10135;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_10135;product=RtT sRNA CP118116.1 Genbank pseudogene 2046242 2046340 . + . ID=gene-PUW38_10140;Name=PUW38_10140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10140;pseudo=true CP118116.1 Protein Homology CDS 2046242 2046340 . + 0 ID=cds-PUW38_10140;Parent=gene-PUW38_10140;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=PUW38_10140;product=integrase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2046423 2046539 . + . ID=gene-PUW38_10145;Name=PUW38_10145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10145;pseudo=true CP118116.1 Protein Homology CDS 2046423 2046539 . + 0 ID=cds-PUW38_10145;Parent=gene-PUW38_10145;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=PUW38_10145;product=transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2046745 2047767 . - . ID=gene-PUW38_10150;Name=PUW38_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10150 CP118116.1 Protein Homology CDS 2046745 2047767 . - 0 ID=cds-WJG83220.1;Parent=gene-PUW38_10150;Dbxref=NCBI_GP:WJG83220.1;Name=WJG83220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1;locus_tag=PUW38_10150;product=IS110-like element ISSaen1 family transposase;protein_id=WJG83220.1;transl_table=11 CP118116.1 Genbank pseudogene 2047834 2047968 . + . ID=gene-PUW38_10155;Name=PUW38_10155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10155;pseudo=true CP118116.1 Protein Homology CDS 2047834 2047968 . + 0 ID=cds-PUW38_10155;Parent=gene-PUW38_10155;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=PUW38_10155;product=transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2048229 2049047 . - . ID=gene-PUW38_10160;Name=PUW38_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10160 CP118116.1 Protein Homology CDS 2048229 2049047 . - 0 ID=cds-WJG82909.1;Parent=gene-PUW38_10160;Dbxref=NCBI_GP:WJG82909.1;Name=WJG82909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=PUW38_10160;product=hypothetical protein;protein_id=WJG82909.1;transl_table=11 CP118116.1 Genbank gene 2050062 2050151 . - . ID=gene-PUW38_10165;Name=PUW38_10165;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_10165 CP118116.1 tRNAscan-SE tRNA 2050062 2050151 . - . ID=rna-PUW38_10165;Parent=gene-PUW38_10165;anticodon=(pos:complement(2050115..2050117));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10165;product=tRNA-Ser CP118116.1 tRNAscan-SE exon 2050062 2050151 . - . ID=exon-PUW38_10165-1;Parent=rna-PUW38_10165;anticodon=(pos:complement(2050115..2050117));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10165;product=tRNA-Ser CP118116.1 Genbank gene 2050240 2051037 . + . ID=gene-PUW38_10170;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=PUW38_10170 CP118116.1 Protein Homology CDS 2050240 2051037 . + 0 ID=cds-WJG82910.1;Parent=gene-PUW38_10170;Dbxref=NCBI_GP:WJG82910.1;Name=WJG82910.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=PUW38_10170;product=DgsA anti-repressor MtfA;protein_id=WJG82910.1;transl_table=11 CP118116.1 Genbank gene 2051138 2051213 . + . ID=gene-PUW38_10175;Name=PUW38_10175;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_10175 CP118116.1 tRNAscan-SE tRNA 2051138 2051213 . + . ID=rna-PUW38_10175;Parent=gene-PUW38_10175;anticodon=(pos:2051171..2051173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10175;product=tRNA-Asn CP118116.1 tRNAscan-SE exon 2051138 2051213 . + . ID=exon-PUW38_10175-1;Parent=rna-PUW38_10175;anticodon=(pos:2051171..2051173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10175;product=tRNA-Asn CP118116.1 Genbank pseudogene 2051381 2051686 . + . ID=gene-PUW38_10180;Name=PUW38_10180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10180;pseudo=true CP118116.1 Protein Homology CDS 2051381 2051686 . + 0 ID=cds-PUW38_10180;Parent=gene-PUW38_10180;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=PUW38_10180;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2052108 2052183 . + . ID=gene-PUW38_10185;Name=PUW38_10185;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_10185 CP118116.1 tRNAscan-SE tRNA 2052108 2052183 . + . ID=rna-PUW38_10185;Parent=gene-PUW38_10185;anticodon=(pos:2052141..2052143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10185;product=tRNA-Asn CP118116.1 tRNAscan-SE exon 2052108 2052183 . + . ID=exon-PUW38_10185-1;Parent=rna-PUW38_10185;anticodon=(pos:2052141..2052143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10185;product=tRNA-Asn CP118116.1 Genbank gene 2052363 2053637 . + . ID=gene-PUW38_10190;Name=PUW38_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10190 CP118116.1 Protein Homology CDS 2052363 2053637 . + 0 ID=cds-WJG82911.1;Parent=gene-PUW38_10190;Dbxref=NCBI_GP:WJG82911.1;Name=WJG82911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=PUW38_10190;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WJG82911.1;transl_table=11 CP118116.1 Genbank gene 2053727 2053960 . - . ID=gene-PUW38_10195;Name=PUW38_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10195 CP118116.1 Protein Homology CDS 2053727 2053960 . - 0 ID=cds-WJG82912.1;Parent=gene-PUW38_10195;Dbxref=NCBI_GP:WJG82912.1;Name=WJG82912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747333.1;locus_tag=PUW38_10195;product=hypothetical protein;protein_id=WJG82912.1;transl_table=11 CP118116.1 Genbank gene 2054439 2055275 . - . ID=gene-PUW38_10200;Name=PUW38_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10200 CP118116.1 Protein Homology CDS 2054439 2055275 . - 0 ID=cds-WJG82913.1;Parent=gene-PUW38_10200;Dbxref=NCBI_GP:WJG82913.1;Name=WJG82913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064127.1;locus_tag=PUW38_10200;product=hypothetical protein;protein_id=WJG82913.1;transl_table=11 CP118116.1 Genbank gene 2055297 2055860 . - . ID=gene-PUW38_10205;Name=PUW38_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10205 CP118116.1 Protein Homology CDS 2055297 2055860 . - 0 ID=cds-WJG82914.1;Parent=gene-PUW38_10205;Dbxref=NCBI_GP:WJG82914.1;Name=WJG82914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072670.1;locus_tag=PUW38_10205;product=hypothetical protein;protein_id=WJG82914.1;transl_table=11 CP118116.1 Genbank gene 2056271 2057152 . + . ID=gene-PUW38_10210;Name=PUW38_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10210 CP118116.1 Protein Homology CDS 2056271 2057152 . + 0 ID=cds-WJG82915.1;Parent=gene-PUW38_10210;Dbxref=NCBI_GP:WJG82915.1;Name=WJG82915.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028416.1;locus_tag=PUW38_10210;product=TIR domain-containing protein;protein_id=WJG82915.1;transl_table=11 CP118116.1 Genbank pseudogene 2057380 2057712 . - . ID=gene-PUW38_10215;Name=PUW38_10215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10215;pseudo=true CP118116.1 Protein Homology CDS 2057380 2057712 . - 0 ID=cds-PUW38_10215;Parent=gene-PUW38_10215;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592083.1;locus_tag=PUW38_10215;product=pilus assembly protein PilV;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2057726 2059564 . - . ID=gene-PUW38_10220;Name=PUW38_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10220 CP118116.1 Protein Homology CDS 2057726 2059564 . - 0 ID=cds-WJG82916.1;Parent=gene-PUW38_10220;Dbxref=NCBI_GP:WJG82916.1;Name=WJG82916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127942.1;locus_tag=PUW38_10220;product=tail fiber protein;protein_id=WJG82916.1;transl_table=11 CP118116.1 Genbank gene 2059580 2060041 . - . ID=gene-PUW38_10225;Name=PUW38_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10225 CP118116.1 Protein Homology CDS 2059580 2060041 . - 0 ID=cds-WJG82917.1;Parent=gene-PUW38_10225;Dbxref=NCBI_GP:WJG82917.1;Name=WJG82917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243510.1;locus_tag=PUW38_10225;product=type 4 pilus major pilin;protein_id=WJG82917.1;transl_table=11 CP118116.1 Genbank pseudogene 2060449 2060755 . - . ID=gene-PUW38_10230;Name=PUW38_10230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10230;pseudo=true CP118116.1 Protein Homology CDS 2060449 2060755 . - 0 ID=cds-PUW38_10230;Parent=gene-PUW38_10230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=PUW38_10230;product=conjugal transfer protein TraD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2061392 2062912 . + . ID=gene-PUW38_10235;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=PUW38_10235 CP118116.1 Protein Homology CDS 2061392 2062912 . + 0 ID=cds-WJG82918.1;Parent=gene-PUW38_10235;Dbxref=NCBI_GP:WJG82918.1;Name=WJG82918.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964095.1;locus_tag=PUW38_10235;product=MobQ family relaxase;protein_id=WJG82918.1;transl_table=11 CP118116.1 Genbank gene 2063124 2063825 . - . ID=gene-PUW38_10240;Name=PUW38_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10240 CP118116.1 Protein Homology CDS 2063124 2063825 . - 0 ID=cds-WJG82919.1;Parent=gene-PUW38_10240;Dbxref=NCBI_GP:WJG82919.1;Name=WJG82919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001732467.1;locus_tag=PUW38_10240;product=DUF2971 domain-containing protein;protein_id=WJG82919.1;transl_table=11 CP118116.1 Genbank gene 2064011 2064274 . - . ID=gene-PUW38_10245;Name=PUW38_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10245 CP118116.1 Protein Homology CDS 2064011 2064274 . - 0 ID=cds-WJG82920.1;Parent=gene-PUW38_10245;Dbxref=NCBI_GP:WJG82920.1;Name=WJG82920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764615.1;locus_tag=PUW38_10245;product=hypothetical protein;protein_id=WJG82920.1;transl_table=11 CP118116.1 Genbank gene 2064285 2064815 . - . ID=gene-PUW38_10250;Name=PUW38_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10250 CP118116.1 Protein Homology CDS 2064285 2064815 . - 0 ID=cds-WJG82921.1;Parent=gene-PUW38_10250;Dbxref=NCBI_GP:WJG82921.1;Name=WJG82921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=PUW38_10250;product=lipoprotein;protein_id=WJG82921.1;transl_table=11 CP118116.1 Genbank gene 2065249 2065722 . + . ID=gene-PUW38_10255;Name=PUW38_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10255 CP118116.1 Protein Homology CDS 2065249 2065722 . + 0 ID=cds-WJG82922.1;Parent=gene-PUW38_10255;Dbxref=NCBI_GP:WJG82922.1;Name=WJG82922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351134.1;locus_tag=PUW38_10255;product=DUF4755 domain-containing protein;protein_id=WJG82922.1;transl_table=11 CP118116.1 Genbank gene 2065755 2066132 . + . ID=gene-PUW38_10260;Name=PUW38_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10260 CP118116.1 Protein Homology CDS 2065755 2066132 . + 0 ID=cds-WJG82923.1;Parent=gene-PUW38_10260;Dbxref=NCBI_GP:WJG82923.1;Name=WJG82923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734570.1;locus_tag=PUW38_10260;product=hypothetical protein;protein_id=WJG82923.1;transl_table=11 CP118116.1 Genbank gene 2066210 2067820 . - . ID=gene-PUW38_10265;Name=PUW38_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10265 CP118116.1 Protein Homology CDS 2066210 2067820 . - 0 ID=cds-WJG82924.1;Parent=gene-PUW38_10265;Dbxref=NCBI_GP:WJG82924.1;Name=WJG82924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276246.1;locus_tag=PUW38_10265;product=class I SAM-dependent methyltransferase;protein_id=WJG82924.1;transl_table=11 CP118116.1 Genbank gene 2067872 2068834 . - . ID=gene-PUW38_10270;Name=PUW38_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10270 CP118116.1 Protein Homology CDS 2067872 2068834 . - 0 ID=cds-WJG82925.1;Parent=gene-PUW38_10270;Dbxref=NCBI_GP:WJG82925.1;Name=WJG82925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000399004.1;locus_tag=PUW38_10270;product=hypothetical protein;protein_id=WJG82925.1;transl_table=11 CP118116.1 Genbank gene 2068890 2069276 . - . ID=gene-PUW38_10275;Name=PUW38_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10275 CP118116.1 Protein Homology CDS 2068890 2069276 . - 0 ID=cds-WJG82926.1;Parent=gene-PUW38_10275;Dbxref=NCBI_GP:WJG82926.1;Name=WJG82926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226498.1;locus_tag=PUW38_10275;product=hypothetical protein;protein_id=WJG82926.1;transl_table=11 CP118116.1 Genbank gene 2069361 2069630 . - . ID=gene-PUW38_10280;Name=PUW38_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10280 CP118116.1 Protein Homology CDS 2069361 2069630 . - 0 ID=cds-WJG82927.1;Parent=gene-PUW38_10280;Dbxref=NCBI_GP:WJG82927.1;Name=WJG82927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059618.1;locus_tag=PUW38_10280;product=hypothetical protein;protein_id=WJG82927.1;transl_table=11 CP118116.1 Genbank gene 2070989 2071723 . + . ID=gene-PUW38_10285;Name=PUW38_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10285 CP118116.1 Protein Homology CDS 2070989 2071723 . + 0 ID=cds-WJG82928.1;Parent=gene-PUW38_10285;Dbxref=NCBI_GP:WJG82928.1;Name=WJG82928.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860215.1;locus_tag=PUW38_10285;product=replication/maintenance protein RepL;protein_id=WJG82928.1;transl_table=11 CP118116.1 Genbank gene 2071754 2072545 . + . ID=gene-PUW38_10290;Name=PUW38_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10290 CP118116.1 Protein Homology CDS 2071754 2072545 . + 0 ID=cds-WJG82929.1;Parent=gene-PUW38_10290;Dbxref=NCBI_GP:WJG82929.1;Name=WJG82929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735917.1;locus_tag=PUW38_10290;product=hypothetical protein;protein_id=WJG82929.1;transl_table=11 CP118116.1 Genbank gene 2072631 2073110 . + . ID=gene-PUW38_10295;Name=PUW38_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10295 CP118116.1 Protein Homology CDS 2072631 2073110 . + 0 ID=cds-WJG82930.1;Parent=gene-PUW38_10295;Dbxref=NCBI_GP:WJG82930.1;Name=WJG82930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233373.1;locus_tag=PUW38_10295;product=DUF4756 family protein;protein_id=WJG82930.1;transl_table=11 CP118116.1 Genbank gene 2073271 2073675 . + . ID=gene-PUW38_10300;Name=PUW38_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10300 CP118116.1 Protein Homology CDS 2073271 2073675 . + 0 ID=cds-WJG82931.1;Parent=gene-PUW38_10300;Dbxref=NCBI_GP:WJG82931.1;Name=WJG82931.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=PUW38_10300;product=H-NS family nucleoid-associated regulatory protein;protein_id=WJG82931.1;transl_table=11 CP118116.1 Genbank pseudogene 2073723 2073999 . + . ID=gene-PUW38_10305;Name=PUW38_10305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10305;pseudo=true CP118116.1 Protein Homology CDS 2073723 2073999 . + 0 ID=cds-PUW38_10305;Parent=gene-PUW38_10305;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=PUW38_10305;product=IS481 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2074091 2074639 . - . ID=gene-PUW38_10310;Name=PUW38_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10310 CP118116.1 Protein Homology CDS 2074091 2074639 . - 0 ID=cds-WJG82932.1;Parent=gene-PUW38_10310;Dbxref=NCBI_GP:WJG82932.1;Name=WJG82932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746429.1;locus_tag=PUW38_10310;product=SLATT domain-containing protein;protein_id=WJG82932.1;transl_table=11 CP118116.1 Genbank gene 2074704 2075975 . - . ID=gene-PUW38_10315;Name=PUW38_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10315 CP118116.1 Protein Homology CDS 2074704 2075975 . - 0 ID=cds-WJG82933.1;Parent=gene-PUW38_10315;Dbxref=NCBI_GP:WJG82933.1;Name=WJG82933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102011.1;locus_tag=PUW38_10315;product=nucleotidyltransferase;protein_id=WJG82933.1;transl_table=11 CP118116.1 Genbank gene 2076221 2076517 . - . ID=gene-PUW38_10320;Name=PUW38_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10320 CP118116.1 Protein Homology CDS 2076221 2076517 . - 0 ID=cds-WJG82934.1;Parent=gene-PUW38_10320;Dbxref=NCBI_GP:WJG82934.1;Name=WJG82934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=PUW38_10320;product=hypothetical protein;protein_id=WJG82934.1;transl_table=11 CP118116.1 Genbank gene 2076562 2076852 . - . ID=gene-PUW38_10325;Name=PUW38_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10325 CP118116.1 Protein Homology CDS 2076562 2076852 . - 0 ID=cds-WJG82935.1;Parent=gene-PUW38_10325;Dbxref=NCBI_GP:WJG82935.1;Name=WJG82935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=PUW38_10325;product=hypothetical protein;protein_id=WJG82935.1;transl_table=11 CP118116.1 Genbank gene 2076934 2077152 . - . ID=gene-PUW38_10330;Name=PUW38_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10330 CP118116.1 Protein Homology CDS 2076934 2077152 . - 0 ID=cds-WJG82936.1;Parent=gene-PUW38_10330;Dbxref=NCBI_GP:WJG82936.1;Name=WJG82936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240778.1;locus_tag=PUW38_10330;product=AlpA family transcriptional regulator;protein_id=WJG82936.1;transl_table=11 CP118116.1 Genbank pseudogene 2077303 2078177 . - . ID=gene-PUW38_10335;Name=PUW38_10335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10335;pseudo=true CP118116.1 Protein Homology CDS 2077303 2078177 . - 0 ID=cds-PUW38_10335;Parent=gene-PUW38_10335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166882.1;locus_tag=PUW38_10335;product=DUF6387 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2078720 2079244 . + . ID=gene-PUW38_10340;Name=PUW38_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10340 CP118116.1 Protein Homology CDS 2078720 2079244 . + 0 ID=cds-WJG82937.1;Parent=gene-PUW38_10340;Dbxref=NCBI_GP:WJG82937.1;Name=WJG82937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=PUW38_10340;product=peptidase;protein_id=WJG82937.1;transl_table=11 CP118116.1 Genbank pseudogene 2079724 2080191 . + . ID=gene-PUW38_10345;Name=PUW38_10345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10345;pseudo=true CP118116.1 Protein Homology CDS 2079724 2080191 . + 0 ID=cds-PUW38_10345;Parent=gene-PUW38_10345;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=PUW38_10345;product=phage integrase N-terminal domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2080277 2080555 . + . ID=gene-PUW38_10350;Name=PUW38_10350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10350;pseudo=true CP118116.1 Protein Homology CDS 2080277 2080555 . + 0 ID=cds-PUW38_10350;Parent=gene-PUW38_10350;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=PUW38_10350;product=transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2081239 2082933 . + . ID=gene-PUW38_10355;Name=PUW38_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10355 CP118116.1 Protein Homology CDS 2081239 2082933 . + 0 ID=cds-WJG83221.1;Parent=gene-PUW38_10355;Dbxref=NCBI_GP:WJG83221.1;Name=WJG83221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=PUW38_10355;product=SEL1-like repeat protein;protein_id=WJG83221.1;transl_table=11 CP118116.1 Genbank gene 2082990 2084720 . + . ID=gene-PUW38_10360;Name=PUW38_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10360 CP118116.1 Protein Homology CDS 2082990 2084720 . + 0 ID=cds-WJG82938.1;Parent=gene-PUW38_10360;Dbxref=NCBI_GP:WJG82938.1;Name=WJG82938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=PUW38_10360;product=hypothetical protein;protein_id=WJG82938.1;transl_table=11 CP118116.1 Genbank pseudogene 2084778 2084882 . - . ID=gene-PUW38_10365;Name=PUW38_10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10365;pseudo=true CP118116.1 Protein Homology CDS 2084778 2084882 . - 0 ID=cds-PUW38_10365;Parent=gene-PUW38_10365;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=PUW38_10365;product=DUF520 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2084930 2085103 . + . ID=gene-PUW38_10370;Name=PUW38_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10370 CP118116.1 Protein Homology CDS 2084930 2085103 . + 0 ID=cds-WJG82939.1;Parent=gene-PUW38_10370;Dbxref=NCBI_GP:WJG82939.1;Name=WJG82939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=PUW38_10370;product=hypothetical protein;protein_id=WJG82939.1;transl_table=11 CP118116.1 Genbank pseudogene 2085284 2085382 . + . ID=gene-PUW38_10375;Name=PUW38_10375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10375;pseudo=true CP118116.1 Protein Homology CDS 2085284 2085382 . + 0 ID=cds-PUW38_10375;Parent=gene-PUW38_10375;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885291.1;locus_tag=PUW38_10375;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2085625 2087079 . - . ID=gene-PUW38_10380;Name=PUW38_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10380 CP118116.1 Protein Homology CDS 2085625 2087079 . - 0 ID=cds-WJG82940.1;Parent=gene-PUW38_10380;Dbxref=NCBI_GP:WJG82940.1;Name=WJG82940.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=PUW38_10380;product=AMP nucleosidase;protein_id=WJG82940.1;transl_table=11 CP118116.1 Genbank gene 2087125 2087286 . + . ID=gene-PUW38_10385;Name=PUW38_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10385 CP118116.1 Protein Homology CDS 2087125 2087286 . + 0 ID=cds-WJG82941.1;Parent=gene-PUW38_10385;Dbxref=NCBI_GP:WJG82941.1;Name=WJG82941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=PUW38_10385;product=cytoplasmic protein;protein_id=WJG82941.1;transl_table=11 CP118116.1 Genbank gene 2087275 2087601 . - . ID=gene-PUW38_10390;Name=PUW38_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10390 CP118116.1 Protein Homology CDS 2087275 2087601 . - 0 ID=cds-WJG82942.1;Parent=gene-PUW38_10390;Dbxref=NCBI_GP:WJG82942.1;Name=WJG82942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=PUW38_10390;product=DUF1493 family protein;protein_id=WJG82942.1;transl_table=11 CP118116.1 Genbank pseudogene 2087595 2088058 . - . ID=gene-PUW38_10395;Name=PUW38_10395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10395;pseudo=true CP118116.1 Protein Homology CDS 2087595 2088058 . - 0 ID=cds-PUW38_10395;Parent=gene-PUW38_10395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=PUW38_10395;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2088478 2088553 . - . ID=gene-PUW38_10400;Name=PUW38_10400;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_10400 CP118116.1 tRNAscan-SE tRNA 2088478 2088553 . - . ID=rna-PUW38_10400;Parent=gene-PUW38_10400;anticodon=(pos:complement(2088518..2088520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10400;product=tRNA-Asn CP118116.1 tRNAscan-SE exon 2088478 2088553 . - . ID=exon-PUW38_10400-1;Parent=rna-PUW38_10400;anticodon=(pos:complement(2088518..2088520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10400;product=tRNA-Asn CP118116.1 Genbank pseudogene 2088694 2090150 . - . ID=gene-PUW38_10405;Name=PUW38_10405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10405;pseudo=true CP118116.1 Protein Homology CDS 2088694 2090150 . - 0 ID=cds-PUW38_10405;Parent=gene-PUW38_10405;Note=frameshifted;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=PUW38_10405;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2090310 2090385 . + . ID=gene-PUW38_10410;Name=PUW38_10410;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_10410 CP118116.1 tRNAscan-SE tRNA 2090310 2090385 . + . ID=rna-PUW38_10410;Parent=gene-PUW38_10410;anticodon=(pos:2090343..2090345);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10410;product=tRNA-Asn CP118116.1 tRNAscan-SE exon 2090310 2090385 . + . ID=exon-PUW38_10410-1;Parent=rna-PUW38_10410;anticodon=(pos:2090343..2090345);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_10410;product=tRNA-Asn CP118116.1 Genbank gene 2090610 2091539 . - . ID=gene-PUW38_10415;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=PUW38_10415 CP118116.1 Protein Homology CDS 2090610 2091539 . - 0 ID=cds-WJG82943.1;Parent=gene-PUW38_10415;Dbxref=NCBI_GP:WJG82943.1;Name=WJG82943.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=PUW38_10415;product=L%2CD-transpeptidase;protein_id=WJG82943.1;transl_table=11 CP118116.1 Genbank gene 2091617 2092687 . - . ID=gene-PUW38_10420;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=PUW38_10420 CP118116.1 Protein Homology CDS 2091617 2092687 . - 0 ID=cds-WJG82944.1;Parent=gene-PUW38_10420;Dbxref=NCBI_GP:WJG82944.1;Name=WJG82944.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=PUW38_10420;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WJG82944.1;transl_table=11 CP118116.1 Genbank gene 2092714 2093457 . - . ID=gene-PUW38_10425;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=PUW38_10425 CP118116.1 Protein Homology CDS 2092714 2093457 . - 0 ID=cds-WJG82945.1;Parent=gene-PUW38_10425;Dbxref=NCBI_GP:WJG82945.1;Name=WJG82945.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=PUW38_10425;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WJG82945.1;transl_table=11 CP118116.1 Genbank gene 2093454 2093999 . - . ID=gene-PUW38_10430;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=PUW38_10430 CP118116.1 Protein Homology CDS 2093454 2093999 . - 0 ID=cds-WJG82946.1;Parent=gene-PUW38_10430;Dbxref=NCBI_GP:WJG82946.1;Name=WJG82946.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=PUW38_10430;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WJG82946.1;transl_table=11 CP118116.1 Genbank gene 2093996 2095510 . - . ID=gene-PUW38_10435;Name=PUW38_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10435 CP118116.1 Protein Homology CDS 2093996 2095510 . - 0 ID=cds-WJG82947.1;Parent=gene-PUW38_10435;Dbxref=NCBI_GP:WJG82947.1;Name=WJG82947.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=PUW38_10435;product=cobyric acid synthase;protein_id=WJG82947.1;transl_table=11 CP118116.1 Genbank pseudogene 2095507 2096320 . - . ID=gene-PUW38_10440;Name=PUW38_10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10440;pseudo=true CP118116.1 Protein Homology CDS 2095507 2096320 . - 0 ID=cds-PUW38_10440;Parent=gene-PUW38_10440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=PUW38_10440;product=energy-coupling factor ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2096329 2097006 . - . ID=gene-PUW38_10445;Name=PUW38_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10445 CP118116.1 Protein Homology CDS 2096329 2097006 . - 0 ID=cds-WJG83222.1;Parent=gene-PUW38_10445;Dbxref=NCBI_GP:WJG83222.1;Name=WJG83222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=PUW38_10445;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WJG83222.1;transl_table=11 CP118116.1 Genbank gene 2096993 2097274 . - . ID=gene-PUW38_10450;Name=PUW38_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10450 CP118116.1 Protein Homology CDS 2096993 2097274 . - 0 ID=cds-WJG82948.1;Parent=gene-PUW38_10450;Dbxref=NCBI_GP:WJG82948.1;Name=WJG82948.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=PUW38_10450;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WJG82948.1;transl_table=11 CP118116.1 Genbank gene 2097276 2098013 . - . ID=gene-PUW38_10455;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=PUW38_10455 CP118116.1 Protein Homology CDS 2097276 2098013 . - 0 ID=cds-WJG82949.1;Parent=gene-PUW38_10455;Dbxref=NCBI_GP:WJG82949.1;Name=WJG82949.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cbiM;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=PUW38_10455;product=cobalt ECF transporter S component CbiM;protein_id=WJG82949.1;transl_table=11 CP118116.1 Genbank gene 2098010 2098723 . - . ID=gene-PUW38_10460;Name=PUW38_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10460 CP118116.1 Protein Homology CDS 2098010 2098723 . - 0 ID=cds-WJG82950.1;Parent=gene-PUW38_10460;Dbxref=NCBI_GP:WJG82950.1;Name=WJG82950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=PUW38_10460;product=cobalt-factor II C(20)-methyltransferase;protein_id=WJG82950.1;transl_table=11 CP118116.1 Genbank gene 2098720 2099514 . - . ID=gene-PUW38_10465;Name=PUW38_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10465 CP118116.1 Protein Homology CDS 2098720 2099514 . - 0 ID=cds-WJG82951.1;Parent=gene-PUW38_10465;Dbxref=NCBI_GP:WJG82951.1;Name=WJG82951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=PUW38_10465;product=sirohydrochlorin cobaltochelatase;protein_id=WJG82951.1;transl_table=11 CP118116.1 Genbank gene 2099517 2100308 . - . ID=gene-PUW38_10470;Name=PUW38_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10470 CP118116.1 Protein Homology CDS 2099517 2100308 . - 0 ID=cds-WJG82952.1;Parent=gene-PUW38_10470;Dbxref=NCBI_GP:WJG82952.1;Name=WJG82952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=PUW38_10470;product=cobalt-precorrin-6A reductase;protein_id=WJG82952.1;transl_table=11 CP118116.1 Genbank gene 2100305 2101030 . - . ID=gene-PUW38_10475;Name=PUW38_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10475 CP118116.1 Protein Homology CDS 2100305 2101030 . - 0 ID=cds-WJG82953.1;Parent=gene-PUW38_10475;Dbxref=NCBI_GP:WJG82953.1;Name=WJG82953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=PUW38_10475;product=precorrin-3B C(17)-methyltransferase;protein_id=WJG82953.1;transl_table=11 CP118116.1 Genbank gene 2101030 2102085 . - . ID=gene-PUW38_10480;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=PUW38_10480 CP118116.1 Protein Homology CDS 2101030 2102085 . - 0 ID=cds-WJG82954.1;Parent=gene-PUW38_10480;Dbxref=NCBI_GP:WJG82954.1;Name=WJG82954.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=PUW38_10480;product=cobalt-precorrin 5A hydrolase;protein_id=WJG82954.1;transl_table=11 CP118116.1 Genbank gene 2102066 2102839 . - . ID=gene-PUW38_10485;Name=PUW38_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10485 CP118116.1 Protein Homology CDS 2102066 2102839 . - 0 ID=cds-WJG82955.1;Parent=gene-PUW38_10485;Dbxref=NCBI_GP:WJG82955.1;Name=WJG82955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=PUW38_10485;product=cobalt-precorrin-4 methyltransferase;protein_id=WJG82955.1;transl_table=11 CP118116.1 Genbank gene 2102823 2103401 . - . ID=gene-PUW38_10490;Name=PUW38_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10490 CP118116.1 Protein Homology CDS 2102823 2103401 . - 0 ID=cds-WJG82956.1;Parent=gene-PUW38_10490;Dbxref=NCBI_GP:WJG82956.1;Name=WJG82956.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=PUW38_10490;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WJG82956.1;transl_table=11 CP118116.1 Genbank gene 2103391 2103996 . - . ID=gene-PUW38_10495;Name=PUW38_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10495 CP118116.1 Protein Homology CDS 2103391 2103996 . - 0 ID=cds-WJG82957.1;Parent=gene-PUW38_10495;Dbxref=NCBI_GP:WJG82957.1;Name=WJG82957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=PUW38_10495;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WJG82957.1;transl_table=11 CP118116.1 Genbank pseudogene 2103990 2105128 . - . ID=gene-PUW38_10500;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=pseudogene;locus_tag=PUW38_10500;pseudo=true CP118116.1 Protein Homology CDS 2103990 2105128 . - 0 ID=cds-PUW38_10500;Parent=gene-PUW38_10500;Note=frameshifted%3B internal stop;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=PUW38_10500;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2105128 2105759 . - . ID=gene-PUW38_10505;Name=PUW38_10505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10505;pseudo=true CP118116.1 Protein Homology CDS 2105128 2105759 . - 0 ID=cds-PUW38_10505;Parent=gene-PUW38_10505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=PUW38_10505;product=cobalt-precorrin-8 methylmutase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2105770 2106723 . - . ID=gene-PUW38_10510;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=PUW38_10510 CP118116.1 Protein Homology CDS 2105770 2106723 . - 0 ID=cds-WJG82958.1;Parent=gene-PUW38_10510;Dbxref=NCBI_GP:WJG82958.1;Name=WJG82958.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=PUW38_10510;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WJG82958.1;transl_table=11 CP118116.1 Genbank gene 2106720 2108099 . - . ID=gene-PUW38_10515;Name=PUW38_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10515 CP118116.1 Protein Homology CDS 2106720 2108099 . - 0 ID=cds-WJG82959.1;Parent=gene-PUW38_10515;Dbxref=NCBI_GP:WJG82959.1;Name=WJG82959.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=PUW38_10515;product=cobyrinate a%2Cc-diamide synthase;protein_id=WJG82959.1;transl_table=11 CP118116.1 cmsearch riboswitch 2108196 2108371 . - . ID=id-CP118116.1:2108196..2108371;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118116.1 Genbank pseudogene 2108696 2109590 . - . ID=gene-PUW38_10520;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=pseudogene;locus_tag=PUW38_10520;pseudo=true CP118116.1 Protein Homology CDS 2108696 2109590 . - 0 ID=cds-PUW38_10520;Parent=gene-PUW38_10520;Note=frameshifted;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=PUW38_10520;product=regulatory protein PocR;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2109807 2110601 . - . ID=gene-PUW38_10525;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=PUW38_10525 CP118116.1 Protein Homology CDS 2109807 2110601 . - 0 ID=cds-WJG83223.1;Parent=gene-PUW38_10525;Dbxref=NCBI_GP:WJG83223.1;Name=WJG83223.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=PUW38_10525;product=propanediol diffusion facilitator PduF;protein_id=WJG83223.1;transl_table=11 CP118116.1 Genbank gene 2111126 2111410 . + . ID=gene-PUW38_10530;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=PUW38_10530 CP118116.1 Protein Homology CDS 2111126 2111410 . + 0 ID=cds-WJG82960.1;Parent=gene-PUW38_10530;Dbxref=NCBI_GP:WJG82960.1;Name=WJG82960.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=PUW38_10530;product=propanediol utilization microcompartment protein PduA;protein_id=WJG82960.1;transl_table=11 CP118116.1 Genbank gene 2111407 2112219 . + . ID=gene-PUW38_10535;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=PUW38_10535 CP118116.1 Protein Homology CDS 2111407 2112219 . + 0 ID=cds-WJG82961.1;Parent=gene-PUW38_10535;Dbxref=NCBI_GP:WJG82961.1;Name=WJG82961.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=PUW38_10535;product=propanediol utilization microcompartment protein PduB;protein_id=WJG82961.1;transl_table=11 CP118116.1 Genbank gene 2112238 2113896 . + . ID=gene-PUW38_10540;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=PUW38_10540 CP118116.1 Protein Homology CDS 2112238 2113896 . + 0 ID=cds-WJG82962.1;Parent=gene-PUW38_10540;Dbxref=NCBI_GP:WJG82962.1;Name=WJG82962.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=PUW38_10540;product=propanediol dehydratase large subunit PduC;protein_id=WJG82962.1;transl_table=11 CP118116.1 Genbank gene 2113907 2114581 . + . ID=gene-PUW38_10545;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=PUW38_10545 CP118116.1 Protein Homology CDS 2113907 2114581 . + 0 ID=cds-WJG82963.1;Parent=gene-PUW38_10545;Dbxref=NCBI_GP:WJG82963.1;Name=WJG82963.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=PUW38_10545;product=propanediol dehydratase medium subunit PduD;protein_id=WJG82963.1;transl_table=11 CP118116.1 Genbank gene 2114596 2115117 . + . ID=gene-PUW38_10550;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=PUW38_10550 CP118116.1 Protein Homology CDS 2114596 2115117 . + 0 ID=cds-WJG82964.1;Parent=gene-PUW38_10550;Dbxref=NCBI_GP:WJG82964.1;Name=WJG82964.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=PUW38_10550;product=propanediol dehydratase small subunit PduE;protein_id=WJG82964.1;transl_table=11 CP118116.1 Genbank pseudogene 2115127 2116967 . + . ID=gene-PUW38_10555;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=pseudogene;locus_tag=PUW38_10555;pseudo=true CP118116.1 Protein Homology CDS 2115127 2116967 . + 0 ID=cds-PUW38_10555;Parent=gene-PUW38_10555;Note=frameshifted;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=PUW38_10555;product=propanediol dehydratase reactivase alpha subunit PduG;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2116957 2117307 . + . ID=gene-PUW38_10560;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=PUW38_10560 CP118116.1 Protein Homology CDS 2116957 2117307 . + 0 ID=cds-WJG82965.1;Parent=gene-PUW38_10560;Dbxref=NCBI_GP:WJG82965.1;Name=WJG82965.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=PUW38_10560;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WJG82965.1;transl_table=11 CP118116.1 Genbank gene 2117326 2117601 . + . ID=gene-PUW38_10565;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=PUW38_10565 CP118116.1 Protein Homology CDS 2117326 2117601 . + 0 ID=cds-WJG82966.1;Parent=gene-PUW38_10565;Dbxref=NCBI_GP:WJG82966.1;Name=WJG82966.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=PUW38_10565;product=propanediol utilization microcompartment protein PduJ;protein_id=WJG82966.1;transl_table=11 CP118116.1 Genbank gene 2117605 2118087 . + . ID=gene-PUW38_10570;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=PUW38_10570 CP118116.1 Protein Homology CDS 2117605 2118087 . + 0 ID=cds-WJG82967.1;Parent=gene-PUW38_10570;Dbxref=NCBI_GP:WJG82967.1;Name=WJG82967.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=PUW38_10570;product=propanediol utilization microcompartment protein PduK;protein_id=WJG82967.1;transl_table=11 CP118116.1 Genbank gene 2118087 2118719 . + . ID=gene-PUW38_10575;Name=PUW38_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10575 CP118116.1 Protein Homology CDS 2118087 2118719 . + 0 ID=cds-WJG82968.1;Parent=gene-PUW38_10575;Dbxref=NCBI_GP:WJG82968.1;Name=WJG82968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=PUW38_10575;product=phosphate propanoyltransferase;protein_id=WJG82968.1;transl_table=11 CP118116.1 Genbank gene 2118716 2119207 . + . ID=gene-PUW38_10580;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=PUW38_10580 CP118116.1 Protein Homology CDS 2118716 2119207 . + 0 ID=cds-WJG82969.1;Parent=gene-PUW38_10580;Dbxref=NCBI_GP:WJG82969.1;Name=WJG82969.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=PUW38_10580;product=propanediol utilization microcompartment protein PduM;protein_id=WJG82969.1;transl_table=11 CP118116.1 Genbank gene 2119211 2119486 . + . ID=gene-PUW38_10585;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=PUW38_10585 CP118116.1 Protein Homology CDS 2119211 2119486 . + 0 ID=cds-WJG82970.1;Parent=gene-PUW38_10585;Dbxref=NCBI_GP:WJG82970.1;Name=WJG82970.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=PUW38_10585;product=propanediol utilization microcompartment protein PduN;protein_id=WJG82970.1;transl_table=11 CP118116.1 Genbank pseudogene 2119496 2120469 . + . ID=gene-PUW38_10590;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=pseudogene;locus_tag=PUW38_10590;pseudo=true CP118116.1 Protein Homology CDS 2119496 2120469 . + 0 ID=cds-PUW38_10590;Parent=gene-PUW38_10590;Note=frameshifted;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=PUW38_10590;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2120466 2121860 . + . ID=gene-PUW38_10595;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=PUW38_10595 CP118116.1 Protein Homology CDS 2120466 2121860 . + 0 ID=cds-WJG82971.1;Parent=gene-PUW38_10595;Dbxref=NCBI_GP:WJG82971.1;Name=WJG82971.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=PUW38_10595;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WJG82971.1;transl_table=11 CP118116.1 Genbank gene 2121872 2122984 . + . ID=gene-PUW38_10600;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=PUW38_10600 CP118116.1 Protein Homology CDS 2121872 2122984 . + 0 ID=cds-WJG82972.1;Parent=gene-PUW38_10600;Dbxref=NCBI_GP:WJG82972.1;Name=WJG82972.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=PUW38_10600;product=1-propanol dehydrogenase PduQ;protein_id=WJG82972.1;transl_table=11 CP118116.1 Genbank gene 2122981 2124336 . + . ID=gene-PUW38_10605;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=PUW38_10605 CP118116.1 Protein Homology CDS 2122981 2124336 . + 0 ID=cds-WJG82973.1;Parent=gene-PUW38_10605;Dbxref=NCBI_GP:WJG82973.1;Name=WJG82973.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=PUW38_10605;product=cobalamin reductase PduS;protein_id=WJG82973.1;transl_table=11 CP118116.1 Genbank gene 2124339 2124893 . + . ID=gene-PUW38_10610;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=PUW38_10610 CP118116.1 Protein Homology CDS 2124339 2124893 . + 0 ID=cds-WJG82974.1;Parent=gene-PUW38_10610;Dbxref=NCBI_GP:WJG82974.1;Name=WJG82974.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=PUW38_10610;product=propanediol utilization microcompartment protein PduT;protein_id=WJG82974.1;transl_table=11 CP118116.1 Genbank gene 2124893 2125243 . + . ID=gene-PUW38_10615;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=PUW38_10615 CP118116.1 Protein Homology CDS 2124893 2125243 . + 0 ID=cds-WJG82975.1;Parent=gene-PUW38_10615;Dbxref=NCBI_GP:WJG82975.1;Name=WJG82975.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=PUW38_10615;product=propanediol utilization microcompartment protein PduU;protein_id=WJG82975.1;transl_table=11 CP118116.1 Genbank gene 2125248 2125700 . + . ID=gene-PUW38_10620;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=PUW38_10620 CP118116.1 Protein Homology CDS 2125248 2125700 . + 0 ID=cds-WJG82976.1;Parent=gene-PUW38_10620;Dbxref=NCBI_GP:WJG82976.1;Name=WJG82976.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=PUW38_10620;product=propanediol utilization protein PduV;protein_id=WJG82976.1;transl_table=11 CP118116.1 Genbank gene 2125685 2126899 . + . ID=gene-PUW38_10625;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=PUW38_10625 CP118116.1 Protein Homology CDS 2125685 2126899 . + 0 ID=cds-WJG82977.1;Parent=gene-PUW38_10625;Dbxref=NCBI_GP:WJG82977.1;Name=WJG82977.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=PUW38_10625;product=propanediol utilization propionate kinase PduW;protein_id=WJG82977.1;transl_table=11 CP118116.1 Genbank gene 2126993 2127859 . + . ID=gene-PUW38_10630;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=PUW38_10630 CP118116.1 Protein Homology CDS 2126993 2127859 . + 0 ID=cds-WJG82978.1;Parent=gene-PUW38_10630;Dbxref=NCBI_GP:WJG82978.1;Name=WJG82978.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=PUW38_10630;product=L-threonine kinase PduX;protein_id=WJG82978.1;transl_table=11 CP118116.1 Genbank gene 2127893 2128228 . - . ID=gene-PUW38_10635;Name=PUW38_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10635 CP118116.1 Protein Homology CDS 2127893 2128228 . - 0 ID=cds-WJG82979.1;Parent=gene-PUW38_10635;Dbxref=NCBI_GP:WJG82979.1;Name=WJG82979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=PUW38_10635;product=DUF496 family protein;protein_id=WJG82979.1;transl_table=11 CP118116.1 Genbank gene 2128472 2129530 . - . ID=gene-PUW38_10640;Name=PUW38_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10640 CP118116.1 Protein Homology CDS 2128472 2129530 . - 0 ID=cds-WJG82980.1;Parent=gene-PUW38_10640;Dbxref=NCBI_GP:WJG82980.1;Name=WJG82980.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=PUW38_10640;product=FUSC family protein;protein_id=WJG82980.1;transl_table=11 CP118116.1 Genbank gene 2129649 2130116 . - . ID=gene-PUW38_10645;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=PUW38_10645 CP118116.1 Protein Homology CDS 2129649 2130116 . - 0 ID=cds-WJG82981.1;Parent=gene-PUW38_10645;Dbxref=NCBI_GP:WJG82981.1;Name=WJG82981.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=PUW38_10645;product=DNA gyrase inhibitor SbmC;protein_id=WJG82981.1;transl_table=11 CP118116.1 Genbank gene 2130267 2131439 . - . ID=gene-PUW38_10650;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=PUW38_10650 CP118116.1 Protein Homology CDS 2130267 2131439 . - 0 ID=cds-WJG82982.1;Parent=gene-PUW38_10650;Dbxref=NCBI_GP:WJG82982.1;Name=WJG82982.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=PUW38_10650;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WJG82982.1;transl_table=11 CP118116.1 Genbank gene 2131563 2132327 . - . ID=gene-PUW38_10655;Name=PUW38_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10655 CP118116.1 Protein Homology CDS 2131563 2132327 . - 0 ID=cds-WJG82983.1;Parent=gene-PUW38_10655;Dbxref=NCBI_GP:WJG82983.1;Name=WJG82983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=PUW38_10655;product=thiosulfate reductase cytochrome B subunit;protein_id=WJG82983.1;transl_table=11 CP118116.1 Genbank gene 2132324 2132902 . - . ID=gene-PUW38_10660;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=PUW38_10660 CP118116.1 Protein Homology CDS 2132324 2132902 . - 0 ID=cds-WJG82984.1;Parent=gene-PUW38_10660;Dbxref=NCBI_GP:WJG82984.1;Name=WJG82984.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=PUW38_10660;product=thiosulfate reductase electron transport protein PhsB;protein_id=WJG82984.1;transl_table=11 CP118116.1 Genbank pseudogene 2132917 2135192 . - . ID=gene-PUW38_10665;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=pseudogene;locus_tag=PUW38_10665;pseudo=true CP118116.1 Protein Homology CDS 2132917 2135192 . - 0 ID=cds-PUW38_10665;Parent=gene-PUW38_10665;Note=frameshifted;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=PUW38_10665;product=thiosulfate reductase PhsA;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2135452 2135562 . - . ID=gene-PUW38_10670;Name=PUW38_10670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10670;pseudo=true CP118116.1 Protein Homology CDS 2135452 2135562 . - 0 ID=cds-PUW38_10670;Parent=gene-PUW38_10670;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=PUW38_10670;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2135812 2138091 . + . ID=gene-PUW38_10675;Name=PUW38_10675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10675;pseudo=true CP118116.1 Protein Homology CDS 2135812 2138091 . + 0 ID=cds-PUW38_10675;Parent=gene-PUW38_10675;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=PUW38_10675;product=type III secretion system effector HECT-type E3 ubiquitin transferase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2138224 2138301 . - . ID=gene-PUW38_10680;Name=PUW38_10680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10680;pseudo=true CP118116.1 Protein Homology CDS 2138224 2138301 . - 0 ID=cds-PUW38_10680;Parent=gene-PUW38_10680;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=PUW38_10680;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2138461 2139891 . + . ID=gene-PUW38_10685;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=PUW38_10685 CP118116.1 Protein Homology CDS 2138461 2139891 . + 0 ID=cds-WJG82985.1;Parent=gene-PUW38_10685;Dbxref=NCBI_GP:WJG82985.1;Name=WJG82985.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=PUW38_10685;product=exodeoxyribonuclease I;protein_id=WJG82985.1;transl_table=11 CP118116.1 Genbank gene 2140027 2141385 . - . ID=gene-PUW38_10690;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=PUW38_10690 CP118116.1 Protein Homology CDS 2140027 2141385 . - 0 ID=cds-WJG82986.1;Parent=gene-PUW38_10690;Dbxref=NCBI_GP:WJG82986.1;Name=WJG82986.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=PUW38_10690;product=putrescine/proton symporter PlaP;protein_id=WJG82986.1;transl_table=11 CP118116.1 Genbank gene 2141375 2141437 . - . ID=gene-PUW38_10695;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=PUW38_10695 CP118116.1 Protein Homology CDS 2141375 2141437 . - 0 ID=cds-WJG83224.1;Parent=gene-PUW38_10695;Dbxref=NCBI_GP:WJG83224.1;Name=WJG83224.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=PUW38_10695;product=membrane protein YoeI;protein_id=WJG83224.1;transl_table=11 CP118116.1 Genbank gene 2141671 2142585 . - . ID=gene-PUW38_10700;Name=PUW38_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10700 CP118116.1 Protein Homology CDS 2141671 2142585 . - 0 ID=cds-WJG82987.1;Parent=gene-PUW38_10700;Dbxref=NCBI_GP:WJG82987.1;Name=WJG82987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=PUW38_10700;product=LysR family transcriptional regulator;protein_id=WJG82987.1;transl_table=11 CP118116.1 Genbank gene 2142631 2143455 . - . ID=gene-PUW38_10705;Name=PUW38_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10705 CP118116.1 Protein Homology CDS 2142631 2143455 . - 0 ID=cds-WJG82988.1;Parent=gene-PUW38_10705;Dbxref=NCBI_GP:WJG82988.1;Name=WJG82988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=PUW38_10705;product=SDR family oxidoreductase;protein_id=WJG82988.1;transl_table=11 CP118116.1 Genbank gene 2143618 2143668 . + . ID=gene-PUW38_10710;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=PUW38_10710 CP118116.1 Protein Homology CDS 2143618 2143668 . + 0 ID=cds-WJG83225.1;Parent=gene-PUW38_10710;Dbxref=NCBI_GP:WJG83225.1;Name=WJG83225.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=PUW38_10710;product=his operon leader peptide;protein_id=WJG83225.1;transl_table=11 CP118116.1 cmsearch sequence_feature 2143644 2143767 . + . ID=id-CP118116.1:2143644..2143767;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118116.1 Genbank gene 2143814 2144713 . + . ID=gene-PUW38_10715;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=PUW38_10715 CP118116.1 Protein Homology CDS 2143814 2144713 . + 0 ID=cds-WJG82989.1;Parent=gene-PUW38_10715;Dbxref=NCBI_GP:WJG82989.1;Name=WJG82989.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=PUW38_10715;product=ATP phosphoribosyltransferase;protein_id=WJG82989.1;transl_table=11 CP118116.1 Genbank gene 2144816 2146120 . + . ID=gene-PUW38_10720;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=PUW38_10720 CP118116.1 Protein Homology CDS 2144816 2146120 . + 0 ID=cds-WJG82990.1;Parent=gene-PUW38_10720;Dbxref=NCBI_GP:WJG82990.1;Name=WJG82990.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=PUW38_10720;product=histidinol dehydrogenase;protein_id=WJG82990.1;transl_table=11 CP118116.1 Genbank gene 2146117 2147196 . + . ID=gene-PUW38_10725;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=PUW38_10725 CP118116.1 Protein Homology CDS 2146117 2147196 . + 0 ID=cds-WJG82991.1;Parent=gene-PUW38_10725;Dbxref=NCBI_GP:WJG82991.1;Name=WJG82991.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=PUW38_10725;product=histidinol-phosphate transaminase;protein_id=WJG82991.1;transl_table=11 CP118116.1 Genbank gene 2147193 2148260 . + . ID=gene-PUW38_10730;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=PUW38_10730 CP118116.1 Protein Homology CDS 2147193 2148260 . + 0 ID=cds-WJG82992.1;Parent=gene-PUW38_10730;Dbxref=NCBI_GP:WJG82992.1;Name=WJG82992.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=PUW38_10730;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WJG82992.1;transl_table=11 CP118116.1 Genbank gene 2148260 2148850 . + . ID=gene-PUW38_10735;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=PUW38_10735 CP118116.1 Protein Homology CDS 2148260 2148850 . + 0 ID=cds-WJG82993.1;Parent=gene-PUW38_10735;Dbxref=NCBI_GP:WJG82993.1;Name=WJG82993.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=PUW38_10735;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WJG82993.1;transl_table=11 CP118116.1 Genbank gene 2148850 2149587 . + . ID=gene-PUW38_10740;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=PUW38_10740 CP118116.1 Protein Homology CDS 2148850 2149587 . + 0 ID=cds-WJG82994.1;Parent=gene-PUW38_10740;Dbxref=NCBI_GP:WJG82994.1;Name=WJG82994.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=PUW38_10740;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WJG82994.1;transl_table=11 CP118116.1 Genbank gene 2149569 2150345 . + . ID=gene-PUW38_10745;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=PUW38_10745 CP118116.1 Protein Homology CDS 2149569 2150345 . + 0 ID=cds-WJG82995.1;Parent=gene-PUW38_10745;Dbxref=NCBI_GP:WJG82995.1;Name=WJG82995.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=PUW38_10745;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WJG82995.1;transl_table=11 CP118116.1 Genbank pseudogene 2150339 2150949 . + . ID=gene-PUW38_10750;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=pseudogene;locus_tag=PUW38_10750;pseudo=true CP118116.1 Protein Homology CDS 2150339 2150949 . + 0 ID=cds-PUW38_10750;Parent=gene-PUW38_10750;Note=frameshifted;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=PUW38_10750;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2151028 2152011 . - . ID=gene-PUW38_10755;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=PUW38_10755 CP118116.1 Protein Homology CDS 2151028 2152011 . - 0 ID=cds-WJG82996.1;Parent=gene-PUW38_10755;Dbxref=NCBI_GP:WJG82996.1;Name=WJG82996.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=PUW38_10755;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WJG82996.1;transl_table=11 CP118116.1 Genbank gene 2152154 2153320 . - . ID=gene-PUW38_10760;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=PUW38_10760 CP118116.1 Protein Homology CDS 2152154 2153320 . - 0 ID=cds-WJG82997.1;Parent=gene-PUW38_10760;Dbxref=NCBI_GP:WJG82997.1;Name=WJG82997.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=PUW38_10760;product=UDP-glucose 6-dehydrogenase;protein_id=WJG82997.1;transl_table=11 CP118116.1 Genbank gene 2153557 2154963 . - . ID=gene-PUW38_10765;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=PUW38_10765 CP118116.1 Protein Homology CDS 2153557 2154963 . - 0 ID=cds-WJG82998.1;Parent=gene-PUW38_10765;Dbxref=NCBI_GP:WJG82998.1;Name=WJG82998.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=PUW38_10765;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WJG82998.1;transl_table=11 CP118116.1 Genbank gene 2155127 2156557 . - . ID=gene-PUW38_10770;Name=PUW38_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10770 CP118116.1 Protein Homology CDS 2155127 2156557 . - 0 ID=cds-WJG82999.1;Parent=gene-PUW38_10770;Dbxref=NCBI_GP:WJG82999.1;Name=WJG82999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=PUW38_10770;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WJG82999.1;transl_table=11 CP118116.1 Genbank gene 2156628 2158061 . - . ID=gene-PUW38_10775;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=PUW38_10775 CP118116.1 Protein Homology CDS 2156628 2158061 . - 0 ID=cds-WJG83000.1;Parent=gene-PUW38_10775;Dbxref=NCBI_GP:WJG83000.1;Name=WJG83000.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=PUW38_10775;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WJG83000.1;transl_table=11 CP118116.1 Genbank gene 2158048 2159487 . - . ID=gene-PUW38_10780;Name=PUW38_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10780 CP118116.1 Protein Homology CDS 2158048 2159487 . - 0 ID=cds-WJG83001.1;Parent=gene-PUW38_10780;Dbxref=NCBI_GP:WJG83001.1;Name=WJG83001.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=PUW38_10780;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WJG83001.1;transl_table=11 CP118116.1 Genbank gene 2159488 2160432 . - . ID=gene-PUW38_10785;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=PUW38_10785 CP118116.1 Protein Homology CDS 2159488 2160432 . - 0 ID=cds-WJG83002.1;Parent=gene-PUW38_10785;Dbxref=NCBI_GP:WJG83002.1;Name=WJG83002.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=PUW38_10785;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WJG83002.1;transl_table=11 CP118116.1 Genbank pseudogene 2160433 2161493 . - . ID=gene-PUW38_10790;Name=PUW38_10790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10790;pseudo=true CP118116.1 Protein Homology CDS 2160433 2161493 . - 0 ID=cds-PUW38_10790;Parent=gene-PUW38_10790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=PUW38_10790;product=glycosyltransferase family 1 protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2162088 2163068 . - . ID=gene-PUW38_10795;Name=PUW38_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10795 CP118116.1 Protein Homology CDS 2162088 2163068 . - 0 ID=cds-WJG83003.1;Parent=gene-PUW38_10795;Dbxref=NCBI_GP:WJG83003.1;Name=WJG83003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233008.1;locus_tag=PUW38_10795;product=glycosyltransferase family 2 protein;protein_id=WJG83003.1;transl_table=11 CP118116.1 Genbank gene 2163070 2164368 . - . ID=gene-PUW38_10800;Name=PUW38_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10800 CP118116.1 Protein Homology CDS 2163070 2164368 . - 0 ID=cds-WJG83004.1;Parent=gene-PUW38_10800;Dbxref=NCBI_GP:WJG83004.1;Name=WJG83004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228887.1;locus_tag=PUW38_10800;product=MATE family efflux transporter;protein_id=WJG83004.1;transl_table=11 CP118116.1 Genbank gene 2164439 2165455 . - . ID=gene-PUW38_10805;Name=PUW38_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10805 CP118116.1 Protein Homology CDS 2164439 2165455 . - 0 ID=cds-WJG83005.1;Parent=gene-PUW38_10805;Dbxref=NCBI_GP:WJG83005.1;Name=WJG83005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770936.1;locus_tag=PUW38_10805;product=CDP-paratose 2-epimerase;protein_id=WJG83005.1;transl_table=11 CP118116.1 Genbank gene 2165452 2166291 . - . ID=gene-PUW38_10810;Name=PUW38_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10810 CP118116.1 Protein Homology CDS 2165452 2166291 . - 0 ID=cds-WJG83006.1;Parent=gene-PUW38_10810;Dbxref=NCBI_GP:WJG83006.1;Name=WJG83006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697757.1;locus_tag=PUW38_10810;product=CDP-paratose synthase;protein_id=WJG83006.1;transl_table=11 CP118116.1 Genbank gene 2166328 2167641 . - . ID=gene-PUW38_10815;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=PUW38_10815 CP118116.1 Protein Homology CDS 2166328 2167641 . - 0 ID=cds-WJG83007.1;Parent=gene-PUW38_10815;Dbxref=NCBI_GP:WJG83007.1;Name=WJG83007.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=PUW38_10815;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WJG83007.1;transl_table=11 CP118116.1 Genbank gene 2167668 2168747 . - . ID=gene-PUW38_10820;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=PUW38_10820 CP118116.1 Protein Homology CDS 2167668 2168747 . - 0 ID=cds-WJG83008.1;Parent=gene-PUW38_10820;Dbxref=NCBI_GP:WJG83008.1;Name=WJG83008.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=PUW38_10820;product=CDP-glucose 4%2C6-dehydratase;protein_id=WJG83008.1;transl_table=11 CP118116.1 Genbank gene 2168752 2169525 . - . ID=gene-PUW38_10825;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=PUW38_10825 CP118116.1 Protein Homology CDS 2168752 2169525 . - 0 ID=cds-WJG83009.1;Parent=gene-PUW38_10825;Dbxref=NCBI_GP:WJG83009.1;Name=WJG83009.1;Ontology_term=GO:0009103,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=PUW38_10825;product=glucose-1-phosphate cytidylyltransferase;protein_id=WJG83009.1;transl_table=11 CP118116.1 Genbank pseudogene 2169522 2170514 . - . ID=gene-PUW38_10830;Name=PUW38_10830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_10830;pseudo=true CP118116.1 Protein Homology CDS 2169522 2170514 . - 0 ID=cds-PUW38_10830;Parent=gene-PUW38_10830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=PUW38_10830;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2170520 2171071 . - . ID=gene-PUW38_10835;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=PUW38_10835 CP118116.1 Protein Homology CDS 2170520 2171071 . - 0 ID=cds-WJG83010.1;Parent=gene-PUW38_10835;Dbxref=NCBI_GP:WJG83010.1;Name=WJG83010.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=PUW38_10835;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WJG83010.1;transl_table=11 CP118116.1 Genbank gene 2171072 2171950 . - . ID=gene-PUW38_10840;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=PUW38_10840 CP118116.1 Protein Homology CDS 2171072 2171950 . - 0 ID=cds-WJG83226.1;Parent=gene-PUW38_10840;Dbxref=NCBI_GP:WJG83226.1;Name=WJG83226.1;Ontology_term=GO:0045226,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=PUW38_10840;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WJG83226.1;transl_table=11 CP118116.1 Genbank gene 2171998 2172897 . - . ID=gene-PUW38_10845;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=PUW38_10845 CP118116.1 Protein Homology CDS 2171998 2172897 . - 0 ID=cds-WJG83011.1;Parent=gene-PUW38_10845;Dbxref=NCBI_GP:WJG83011.1;Name=WJG83011.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=PUW38_10845;product=dTDP-4-dehydrorhamnose reductase;protein_id=WJG83011.1;transl_table=11 CP118116.1 Genbank gene 2172897 2173982 . - . ID=gene-PUW38_10850;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=PUW38_10850 CP118116.1 Protein Homology CDS 2172897 2173982 . - 0 ID=cds-WJG83012.1;Parent=gene-PUW38_10850;Dbxref=NCBI_GP:WJG83012.1;Name=WJG83012.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=PUW38_10850;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WJG83012.1;transl_table=11 CP118116.1 Genbank gene 2174359 2175252 . - . ID=gene-PUW38_10855;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=PUW38_10855 CP118116.1 Protein Homology CDS 2174359 2175252 . - 0 ID=cds-WJG83013.1;Parent=gene-PUW38_10855;Dbxref=NCBI_GP:WJG83013.1;Name=WJG83013.1;Ontology_term=GO:0009225,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=PUW38_10855;product=GalU regulator GalF;protein_id=WJG83013.1;transl_table=11 CP118116.1 Genbank gene 2175430 2176833 . - . ID=gene-PUW38_10860;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=PUW38_10860 CP118116.1 Protein Homology CDS 2175430 2176833 . - 0 ID=cds-WJG83014.1;Parent=gene-PUW38_10860;Dbxref=NCBI_GP:WJG83014.1;Name=WJG83014.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=PUW38_10860;product=colanic acid biosynthesis protein WcaM;protein_id=WJG83014.1;transl_table=11 CP118116.1 Genbank gene 2176844 2178064 . - . ID=gene-PUW38_10865;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=PUW38_10865 CP118116.1 Protein Homology CDS 2176844 2178064 . - 0 ID=cds-WJG83015.1;Parent=gene-PUW38_10865;Dbxref=NCBI_GP:WJG83015.1;Name=WJG83015.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=PUW38_10865;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WJG83015.1;transl_table=11 CP118116.1 Genbank gene 2178061 2179341 . - . ID=gene-PUW38_10870;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=PUW38_10870 CP118116.1 Protein Homology CDS 2178061 2179341 . - 0 ID=cds-WJG83016.1;Parent=gene-PUW38_10870;Dbxref=NCBI_GP:WJG83016.1;Name=WJG83016.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=PUW38_10870;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WJG83016.1;transl_table=11 CP118116.1 Genbank gene 2179363 2180841 . - . ID=gene-PUW38_10875;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=PUW38_10875 CP118116.1 Protein Homology CDS 2179363 2180841 . - 0 ID=cds-WJG83017.1;Parent=gene-PUW38_10875;Dbxref=NCBI_GP:WJG83017.1;Name=WJG83017.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=PUW38_10875;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WJG83017.1;transl_table=11 CP118116.1 Genbank gene 2180943 2182337 . - . ID=gene-PUW38_10880;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=PUW38_10880 CP118116.1 Protein Homology CDS 2180943 2182337 . - 0 ID=cds-WJG83018.1;Parent=gene-PUW38_10880;Dbxref=NCBI_GP:WJG83018.1;Name=WJG83018.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=PUW38_10880;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WJG83018.1;transl_table=11 CP118116.1 Genbank gene 2182391 2183761 . - . ID=gene-PUW38_10885;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=PUW38_10885 CP118116.1 Protein Homology CDS 2182391 2183761 . - 0 ID=cds-WJG83019.1;Parent=gene-PUW38_10885;Dbxref=NCBI_GP:WJG83019.1;Name=WJG83019.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=PUW38_10885;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WJG83019.1;transl_table=11 CP118116.1 Genbank gene 2183872 2185314 . - . ID=gene-PUW38_10890;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=PUW38_10890 CP118116.1 Protein Homology CDS 2183872 2185314 . - 0 ID=cds-WJG83020.1;Parent=gene-PUW38_10890;Dbxref=NCBI_GP:WJG83020.1;Name=WJG83020.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=PUW38_10890;product=mannose-1-phosphate guanyltransferase;protein_id=WJG83020.1;transl_table=11 CP118116.1 Genbank gene 2185311 2186534 . - . ID=gene-PUW38_10895;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=PUW38_10895 CP118116.1 Protein Homology CDS 2185311 2186534 . - 0 ID=cds-WJG83021.1;Parent=gene-PUW38_10895;Dbxref=NCBI_GP:WJG83021.1;Name=WJG83021.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=PUW38_10895;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WJG83021.1;transl_table=11 CP118116.1 Genbank gene 2186531 2187004 . - . ID=gene-PUW38_10900;Name=PUW38_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10900 CP118116.1 Protein Homology CDS 2186531 2187004 . - 0 ID=cds-WJG83022.1;Parent=gene-PUW38_10900;Dbxref=NCBI_GP:WJG83022.1;Name=WJG83022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=PUW38_10900;product=GDP-mannose mannosyl hydrolase;protein_id=WJG83022.1;transl_table=11 CP118116.1 Genbank gene 2187007 2187972 . - . ID=gene-PUW38_10905;Name=PUW38_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10905 CP118116.1 Protein Homology CDS 2187007 2187972 . - 0 ID=cds-WJG83023.1;Parent=gene-PUW38_10905;Dbxref=NCBI_GP:WJG83023.1;Name=WJG83023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=PUW38_10905;product=GDP-L-fucose synthase;protein_id=WJG83023.1;transl_table=11 CP118116.1 Genbank gene 2187975 2189096 . - . ID=gene-PUW38_10910;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=PUW38_10910 CP118116.1 Protein Homology CDS 2187975 2189096 . - 0 ID=cds-WJG83024.1;Parent=gene-PUW38_10910;Dbxref=NCBI_GP:WJG83024.1;Name=WJG83024.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=PUW38_10910;product=GDP-mannose 4%2C6-dehydratase;protein_id=WJG83024.1;transl_table=11 CP118116.1 Genbank gene 2189120 2189674 . - . ID=gene-PUW38_10915;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=PUW38_10915 CP118116.1 Protein Homology CDS 2189120 2189674 . - 0 ID=cds-WJG83025.1;Parent=gene-PUW38_10915;Dbxref=NCBI_GP:WJG83025.1;Name=WJG83025.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=PUW38_10915;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WJG83025.1;transl_table=11 CP118116.1 Genbank gene 2189690 2190436 . - . ID=gene-PUW38_10920;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=PUW38_10920 CP118116.1 Protein Homology CDS 2189690 2190436 . - 0 ID=cds-WJG83026.1;Parent=gene-PUW38_10920;Dbxref=NCBI_GP:WJG83026.1;Name=WJG83026.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=PUW38_10920;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WJG83026.1;transl_table=11 CP118116.1 Genbank gene 2190449 2191663 . - . ID=gene-PUW38_10925;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=PUW38_10925 CP118116.1 Protein Homology CDS 2190449 2191663 . - 0 ID=cds-WJG83027.1;Parent=gene-PUW38_10925;Dbxref=NCBI_GP:WJG83027.1;Name=WJG83027.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=PUW38_10925;product=colanic acid polymerase WcaD;protein_id=WJG83027.1;transl_table=11 CP118116.1 Genbank gene 2191638 2192855 . - . ID=gene-PUW38_10930;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=PUW38_10930 CP118116.1 Protein Homology CDS 2191638 2192855 . - 0 ID=cds-WJG83028.1;Parent=gene-PUW38_10930;Dbxref=NCBI_GP:WJG83028.1;Name=WJG83028.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=PUW38_10930;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WJG83028.1;transl_table=11 CP118116.1 Genbank gene 2192852 2193340 . - . ID=gene-PUW38_10935;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=PUW38_10935 CP118116.1 Protein Homology CDS 2192852 2193340 . - 0 ID=cds-WJG83029.1;Parent=gene-PUW38_10935;Dbxref=NCBI_GP:WJG83029.1;Name=WJG83029.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=PUW38_10935;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WJG83029.1;transl_table=11 CP118116.1 Genbank gene 2193343 2194185 . - . ID=gene-PUW38_10940;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=PUW38_10940 CP118116.1 Protein Homology CDS 2193343 2194185 . - 0 ID=cds-WJG83030.1;Parent=gene-PUW38_10940;Dbxref=NCBI_GP:WJG83030.1;Name=WJG83030.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=PUW38_10940;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WJG83030.1;transl_table=11 CP118116.1 Genbank gene 2194272 2196431 . - . ID=gene-PUW38_10945;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=PUW38_10945 CP118116.1 Protein Homology CDS 2194272 2196431 . - 0 ID=cds-WJG83031.1;Parent=gene-PUW38_10945;Dbxref=NCBI_GP:WJG83031.1;Name=WJG83031.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=PUW38_10945;product=tyrosine-protein kinase Wzc;protein_id=WJG83031.1;transl_table=11 CP118116.1 Genbank gene 2196428 2196877 . - . ID=gene-PUW38_10950;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=PUW38_10950 CP118116.1 Protein Homology CDS 2196428 2196877 . - 0 ID=cds-WJG83032.1;Parent=gene-PUW38_10950;Dbxref=NCBI_GP:WJG83032.1;Name=WJG83032.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=PUW38_10950;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WJG83032.1;transl_table=11 CP118116.1 Genbank gene 2196883 2198022 . - . ID=gene-PUW38_10955;Name=PUW38_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10955 CP118116.1 Protein Homology CDS 2196883 2198022 . - 0 ID=cds-WJG83033.1;Parent=gene-PUW38_10955;Dbxref=NCBI_GP:WJG83033.1;Name=WJG83033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=PUW38_10955;product=polysaccharide export protein;protein_id=WJG83033.1;transl_table=11 CP118116.1 Genbank gene 2198697 2200277 . + . ID=gene-PUW38_10960;Name=PUW38_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10960 CP118116.1 Protein Homology CDS 2198697 2200277 . + 0 ID=cds-WJG83034.1;Parent=gene-PUW38_10960;Dbxref=NCBI_GP:WJG83034.1;Name=WJG83034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=PUW38_10960;product=TerC family protein;protein_id=WJG83034.1;transl_table=11 CP118116.1 Genbank gene 2200363 2202219 . - . ID=gene-PUW38_10965;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=PUW38_10965 CP118116.1 Protein Homology CDS 2200363 2202219 . - 0 ID=cds-WJG83035.1;Parent=gene-PUW38_10965;Dbxref=NCBI_GP:WJG83035.1;Name=WJG83035.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=PUW38_10965;product=outer membrane assembly protein AsmA;protein_id=WJG83035.1;transl_table=11 CP118116.1 Genbank gene 2202258 2202839 . - . ID=gene-PUW38_10970;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=PUW38_10970 CP118116.1 Protein Homology CDS 2202258 2202839 . - 0 ID=cds-WJG83036.1;Parent=gene-PUW38_10970;Dbxref=NCBI_GP:WJG83036.1;Name=WJG83036.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=PUW38_10970;product=dCTP deaminase;protein_id=WJG83036.1;transl_table=11 CP118116.1 Genbank gene 2202930 2203571 . - . ID=gene-PUW38_10975;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=PUW38_10975 CP118116.1 Protein Homology CDS 2202930 2203571 . - 0 ID=cds-WJG83037.1;Parent=gene-PUW38_10975;Dbxref=NCBI_GP:WJG83037.1;Name=WJG83037.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=PUW38_10975;product=uridine kinase;protein_id=WJG83037.1;transl_table=11 CP118116.1 Genbank gene 2203902 2206892 . + . ID=gene-PUW38_10980;Name=PUW38_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_10980 CP118116.1 Protein Homology CDS 2203902 2206892 . + 0 ID=cds-WJG83038.1;Parent=gene-PUW38_10980;Dbxref=NCBI_GP:WJG83038.1;Name=WJG83038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=PUW38_10980;product=MASE1 domain-containing protein;protein_id=WJG83038.1;transl_table=11 CP118116.1 Genbank gene 2206860 2207729 . - . ID=gene-PUW38_10985;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=PUW38_10985 CP118116.1 Protein Homology CDS 2206860 2207729 . - 0 ID=cds-WJG83039.1;Parent=gene-PUW38_10985;Dbxref=NCBI_GP:WJG83039.1;Name=WJG83039.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=PUW38_10985;product=DNA-3-methyladenine glycosylase 2;protein_id=WJG83039.1;transl_table=11 CP118116.1 Genbank gene 2207863 2209215 . + . ID=gene-PUW38_10990;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=PUW38_10990 CP118116.1 Protein Homology CDS 2207863 2209215 . + 0 ID=cds-WJG83040.1;Parent=gene-PUW38_10990;Dbxref=NCBI_GP:WJG83040.1;Name=WJG83040.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=PUW38_10990;product=molecular chaperone;protein_id=WJG83040.1;transl_table=11 CP118116.1 Genbank gene 2209314 2209373 . - . ID=gene-PUW38_10995;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=PUW38_10995 CP118116.1 Protein Homology CDS 2209314 2209373 . - 0 ID=cds-WJG83227.1;Parent=gene-PUW38_10995;Dbxref=NCBI_GP:WJG83227.1;Name=WJG83227.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=PUW38_10995;product=type I toxin-antitoxin system toxin IbsA;protein_id=WJG83227.1;transl_table=11 CP118116.1 Genbank gene 2209656 2210897 . + . ID=gene-PUW38_11000;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=PUW38_11000 CP118116.1 Protein Homology CDS 2209656 2210897 . + 0 ID=cds-WJG83041.1;Parent=gene-PUW38_11000;Dbxref=NCBI_GP:WJG83041.1;Name=WJG83041.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=PUW38_11000;product=multidrug efflux RND transporter subunit MdtA;protein_id=WJG83041.1;transl_table=11 CP118116.1 Genbank gene 2210897 2214019 . + . ID=gene-PUW38_11005;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=PUW38_11005 CP118116.1 Protein Homology CDS 2210897 2214019 . + 0 ID=cds-WJG83042.1;Parent=gene-PUW38_11005;Dbxref=NCBI_GP:WJG83042.1;Name=WJG83042.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=PUW38_11005;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WJG83042.1;transl_table=11 CP118116.1 Genbank gene 2214020 2217100 . + . ID=gene-PUW38_11010;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=PUW38_11010 CP118116.1 Protein Homology CDS 2214020 2217100 . + 0 ID=cds-WJG83043.1;Parent=gene-PUW38_11010;Dbxref=NCBI_GP:WJG83043.1;Name=WJG83043.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=PUW38_11010;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WJG83043.1;transl_table=11 CP118116.1 Genbank pseudogene 2217097 2218507 . + . ID=gene-PUW38_11015;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=pseudogene;locus_tag=PUW38_11015;pseudo=true CP118116.1 Protein Homology CDS 2217097 2218507 . + 0 ID=cds-PUW38_11015;Parent=gene-PUW38_11015;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=PUW38_11015;product=multidrug transporter subunit MdtD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2218507 2219910 . + . ID=gene-PUW38_11020;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=PUW38_11020 CP118116.1 Protein Homology CDS 2218507 2219910 . + 0 ID=cds-WJG83044.1;Parent=gene-PUW38_11020;Dbxref=NCBI_GP:WJG83044.1;Name=WJG83044.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=PUW38_11020;product=two-component system sensor histidine kinase BaeS;protein_id=WJG83044.1;transl_table=11 CP118116.1 Genbank gene 2219907 2220629 . + . ID=gene-PUW38_11025;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=PUW38_11025 CP118116.1 Protein Homology CDS 2219907 2220629 . + 0 ID=cds-WJG83045.1;Parent=gene-PUW38_11025;Dbxref=NCBI_GP:WJG83045.1;Name=WJG83045.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=PUW38_11025;product=two-component system response regulator BaeR;protein_id=WJG83045.1;transl_table=11 CP118116.1 Genbank gene 2220898 2222100 . + . ID=gene-PUW38_11030;Name=PUW38_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11030 CP118116.1 Protein Homology CDS 2220898 2222100 . + 0 ID=cds-WJG83046.1;Parent=gene-PUW38_11030;Dbxref=NCBI_GP:WJG83046.1;Name=WJG83046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=PUW38_11030;product=cytoplasmic protein;protein_id=WJG83046.1;transl_table=11 CP118116.1 Genbank pseudogene 2222100 2222815 . + . ID=gene-PUW38_11035;Name=PUW38_11035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11035;pseudo=true CP118116.1 Protein Homology CDS 2222100 2222815 . + 0 ID=cds-PUW38_11035;Parent=gene-PUW38_11035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=PUW38_11035;product=DUF1266 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2222826 2224937 . + . ID=gene-PUW38_11040;Name=PUW38_11040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11040;pseudo=true CP118116.1 Protein Homology CDS 2222826 2224937 . + 0 ID=cds-PUW38_11040;Parent=gene-PUW38_11040;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=PUW38_11040;product=DUF4034 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2225053 2226414 . + . ID=gene-PUW38_11045;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=PUW38_11045 CP118116.1 Protein Homology CDS 2225053 2226414 . + 0 ID=cds-WJG83228.1;Parent=gene-PUW38_11045;Dbxref=NCBI_GP:WJG83228.1;Name=WJG83228.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=PUW38_11045;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WJG83228.1;transl_table=11 CP118116.1 Genbank pseudogene 2226865 2227037 . + . ID=gene-PUW38_11050;Name=PUW38_11050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11050;pseudo=true CP118116.1 Protein Homology CDS 2226865 2227037 . + 0 ID=cds-PUW38_11050;Parent=gene-PUW38_11050;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=PUW38_11050;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2227053 2227466 . - . ID=gene-PUW38_11055;Name=PUW38_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11055 CP118116.1 Protein Homology CDS 2227053 2227466 . - 0 ID=cds-WJG83047.1;Parent=gene-PUW38_11055;Dbxref=NCBI_GP:WJG83047.1;Name=WJG83047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=PUW38_11055;product=CesT family type III secretion system chaperone;protein_id=WJG83047.1;transl_table=11 CP118116.1 Genbank gene 2227588 2227923 . - . ID=gene-PUW38_11060;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=PUW38_11060 CP118116.1 Protein Homology CDS 2227588 2227923 . - 0 ID=cds-WJG83048.1;Parent=gene-PUW38_11060;Dbxref=NCBI_GP:WJG83048.1;Name=WJG83048.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=PUW38_11060;product=type III secretion system effector SteD;protein_id=WJG83048.1;transl_table=11 CP118116.1 Genbank gene 2228485 2229384 . + . ID=gene-PUW38_11065;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=PUW38_11065 CP118116.1 Protein Homology CDS 2228485 2229384 . + 0 ID=cds-WJG83049.1;Parent=gene-PUW38_11065;Dbxref=NCBI_GP:WJG83049.1;Name=WJG83049.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;gene=yegS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=PUW38_11065;product=lipid kinase YegS;protein_id=WJG83049.1;transl_table=11 CP118116.1 Genbank gene 2229437 2230489 . - . ID=gene-PUW38_11070;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=PUW38_11070 CP118116.1 Protein Homology CDS 2229437 2230489 . - 0 ID=cds-WJG83050.1;Parent=gene-PUW38_11070;Dbxref=NCBI_GP:WJG83050.1;Name=WJG83050.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=PUW38_11070;product=class I fructose-bisphosphate aldolase;protein_id=WJG83050.1;transl_table=11 CP118116.1 Genbank gene 2230743 2232014 . + . ID=gene-PUW38_11075;Name=PUW38_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11075 CP118116.1 Protein Homology CDS 2230743 2232014 . + 0 ID=cds-WJG83051.1;Parent=gene-PUW38_11075;Dbxref=NCBI_GP:WJG83051.1;Name=WJG83051.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=PUW38_11075;product=nucleoside permease;protein_id=WJG83051.1;transl_table=11 CP118116.1 Genbank gene 2232011 2233015 . + . ID=gene-PUW38_11080;Name=PUW38_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11080 CP118116.1 Protein Homology CDS 2232011 2233015 . + 0 ID=cds-WJG83052.1;Parent=gene-PUW38_11080;Dbxref=NCBI_GP:WJG83052.1;Name=WJG83052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=PUW38_11080;product=ADP-ribosylglycohydrolase family protein;protein_id=WJG83052.1;transl_table=11 CP118116.1 Genbank gene 2233012 2233977 . + . ID=gene-PUW38_11085;Name=PUW38_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11085 CP118116.1 Protein Homology CDS 2233012 2233977 . + 0 ID=cds-WJG83053.1;Parent=gene-PUW38_11085;Dbxref=NCBI_GP:WJG83053.1;Name=WJG83053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=PUW38_11085;product=PfkB family carbohydrate kinase;protein_id=WJG83053.1;transl_table=11 CP118116.1 Genbank gene 2233951 2234697 . - . ID=gene-PUW38_11090;Name=PUW38_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11090 CP118116.1 Protein Homology CDS 2233951 2234697 . - 0 ID=cds-WJG83054.1;Parent=gene-PUW38_11090;Dbxref=NCBI_GP:WJG83054.1;Name=WJG83054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=PUW38_11090;product=GntR family transcriptional regulator;protein_id=WJG83054.1;transl_table=11 CP118116.1 Genbank gene 2234733 2235533 . - . ID=gene-PUW38_11095;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=PUW38_11095 CP118116.1 Protein Homology CDS 2234733 2235533 . - 0 ID=cds-WJG83055.1;Parent=gene-PUW38_11095;Dbxref=NCBI_GP:WJG83055.1;Name=WJG83055.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=PUW38_11095;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WJG83055.1;transl_table=11 CP118116.1 Genbank gene 2235520 2236317 . - . ID=gene-PUW38_11100;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=PUW38_11100 CP118116.1 Protein Homology CDS 2235520 2236317 . - 0 ID=cds-WJG83056.1;Parent=gene-PUW38_11100;Dbxref=NCBI_GP:WJG83056.1;Name=WJG83056.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=PUW38_11100;product=hydroxyethylthiazole kinase;protein_id=WJG83056.1;transl_table=11 CP118116.1 cmsearch riboswitch 2236349 2236445 . - . ID=id-CP118116.1:2236349..2236445;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118116.1 Genbank gene 2236727 2237041 . + . ID=gene-PUW38_11105;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=PUW38_11105 CP118116.1 Protein Homology CDS 2236727 2237041 . + 0 ID=cds-WJG83057.1;Parent=gene-PUW38_11105;Dbxref=NCBI_GP:WJG83057.1;Name=WJG83057.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=PUW38_11105;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WJG83057.1;transl_table=11 CP118116.1 Genbank gene 2237085 2238107 . - . ID=gene-PUW38_11110;Name=PUW38_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11110 CP118116.1 Protein Homology CDS 2237085 2238107 . - 0 ID=cds-WJG83058.1;Parent=gene-PUW38_11110;Dbxref=NCBI_GP:WJG83058.1;Name=WJG83058.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=PUW38_11110;product=fimbrial protein;protein_id=WJG83058.1;transl_table=11 CP118116.1 Genbank pseudogene 2238123 2240610 . - . ID=gene-PUW38_11115;Name=PUW38_11115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11115;pseudo=true CP118116.1 Protein Homology CDS 2238123 2240610 . - 0 ID=cds-PUW38_11115;Parent=gene-PUW38_11115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=PUW38_11115;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2240639 2241319 . - . ID=gene-PUW38_11120;Name=PUW38_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11120 CP118116.1 Protein Homology CDS 2240639 2241319 . - 0 ID=cds-WJG83059.1;Parent=gene-PUW38_11120;Dbxref=NCBI_GP:WJG83059.1;Name=WJG83059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=PUW38_11120;product=fimbrial assembly chaperone;protein_id=WJG83059.1;transl_table=11 CP118116.1 Genbank gene 2241381 2241914 . - . ID=gene-PUW38_11125;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=PUW38_11125 CP118116.1 Protein Homology CDS 2241381 2241914 . - 0 ID=cds-WJG83060.1;Parent=gene-PUW38_11125;Dbxref=NCBI_GP:WJG83060.1;Name=WJG83060.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=PUW38_11125;product=fimbrial protein YehD;protein_id=WJG83060.1;transl_table=11 CP118116.1 Genbank gene 2242192 2242473 . - . ID=gene-PUW38_11130;Name=PUW38_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11130 CP118116.1 Protein Homology CDS 2242192 2242473 . - 0 ID=cds-WJG83061.1;Parent=gene-PUW38_11130;Dbxref=NCBI_GP:WJG83061.1;Name=WJG83061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=PUW38_11130;product=YehE family protein;protein_id=WJG83061.1;transl_table=11 CP118116.1 Genbank gene 2242750 2243859 . - . ID=gene-PUW38_11135;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=PUW38_11135 CP118116.1 Protein Homology CDS 2242750 2243859 . - 0 ID=cds-WJG83062.1;Parent=gene-PUW38_11135;Dbxref=NCBI_GP:WJG83062.1;Name=WJG83062.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=PUW38_11135;product=iron-sulfur cluster carrier protein ApbC;protein_id=WJG83062.1;transl_table=11 CP118116.1 Genbank gene 2244024 2246057 . + . ID=gene-PUW38_11140;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=PUW38_11140 CP118116.1 Protein Homology CDS 2244024 2246057 . + 0 ID=cds-WJG83063.1;Parent=gene-PUW38_11140;Dbxref=NCBI_GP:WJG83063.1;Name=WJG83063.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=PUW38_11140;product=methionine--tRNA ligase;protein_id=WJG83063.1;transl_table=11 CP118116.1 Genbank gene 2246298 2246756 . + . ID=gene-PUW38_11145;Name=PUW38_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11145 CP118116.1 Protein Homology CDS 2246298 2246756 . + 0 ID=cds-WJG83064.1;Parent=gene-PUW38_11145;Dbxref=NCBI_GP:WJG83064.1;Name=WJG83064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=PUW38_11145;product=YehR family lipoprotein;protein_id=WJG83064.1;transl_table=11 CP118116.1 Genbank pseudogene 2246928 2247456 . + . ID=gene-PUW38_11150;Name=PUW38_11150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11150;pseudo=true CP118116.1 Protein Homology CDS 2246928 2247456 . + 0 ID=cds-PUW38_11150;Parent=gene-PUW38_11150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=PUW38_11150;product=YehR family lipoprotein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2247513 2247980 . - . ID=gene-PUW38_11155;Name=PUW38_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11155 CP118116.1 Protein Homology CDS 2247513 2247980 . - 0 ID=cds-WJG83065.1;Parent=gene-PUW38_11155;Dbxref=NCBI_GP:WJG83065.1;Name=WJG83065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=PUW38_11155;product=DUF1456 family protein;protein_id=WJG83065.1;transl_table=11 CP118116.1 Genbank gene 2248027 2248746 . - . ID=gene-PUW38_11160;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=PUW38_11160 CP118116.1 Protein Homology CDS 2248027 2248746 . - 0 ID=cds-WJG83066.1;Parent=gene-PUW38_11160;Dbxref=NCBI_GP:WJG83066.1;Name=WJG83066.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=PUW38_11160;product=two-component system response regulator BtsR;protein_id=WJG83066.1;transl_table=11 CP118116.1 Genbank gene 2248743 2250428 . - . ID=gene-PUW38_11165;Name=PUW38_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11165 CP118116.1 Protein Homology CDS 2248743 2250428 . - 0 ID=cds-WJG83067.1;Parent=gene-PUW38_11165;Dbxref=NCBI_GP:WJG83067.1;Name=WJG83067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=PUW38_11165;product=sensor histidine kinase;protein_id=WJG83067.1;transl_table=11 CP118116.1 Genbank gene 2250651 2251382 . + . ID=gene-PUW38_11170;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=PUW38_11170 CP118116.1 Protein Homology CDS 2250651 2251382 . + 0 ID=cds-WJG83068.1;Parent=gene-PUW38_11170;Dbxref=NCBI_GP:WJG83068.1;Name=WJG83068.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=PUW38_11170;product=HTH-type transcriptional regulator MlrA;protein_id=WJG83068.1;transl_table=11 CP118116.1 Genbank gene 2251442 2251549 . + . ID=gene-PUW38_11175;Name=PUW38_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11175 CP118116.1 Protein Homology CDS 2251442 2251549 . + 0 ID=cds-WJG83069.1;Parent=gene-PUW38_11175;Dbxref=NCBI_GP:WJG83069.1;Name=WJG83069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=PUW38_11175;product=protein YohO;protein_id=WJG83069.1;transl_table=11 CP118116.1 Genbank gene 2251530 2252261 . - . ID=gene-PUW38_11180;Name=PUW38_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11180 CP118116.1 Protein Homology CDS 2251530 2252261 . - 0 ID=cds-WJG83070.1;Parent=gene-PUW38_11180;Dbxref=NCBI_GP:WJG83070.1;Name=WJG83070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=PUW38_11180;product=ABC transporter permease;protein_id=WJG83070.1;transl_table=11 CP118116.1 Genbank gene 2252245 2253192 . - . ID=gene-PUW38_11185;Name=PUW38_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11185 CP118116.1 Protein Homology CDS 2252245 2253192 . - 0 ID=cds-WJG83071.1;Parent=gene-PUW38_11185;Dbxref=NCBI_GP:WJG83071.1;Name=WJG83071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=PUW38_11185;product=ABC transporter ATP-binding protein;protein_id=WJG83071.1;transl_table=11 CP118116.1 Genbank gene 2253185 2254354 . - . ID=gene-PUW38_11190;Name=PUW38_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11190 CP118116.1 Protein Homology CDS 2253185 2254354 . - 0 ID=cds-WJG83072.1;Parent=gene-PUW38_11190;Dbxref=NCBI_GP:WJG83072.1;Name=WJG83072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=PUW38_11190;product=ABC transporter permease;protein_id=WJG83072.1;transl_table=11 CP118116.1 Genbank gene 2254358 2255275 . - . ID=gene-PUW38_11195;Name=PUW38_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11195 CP118116.1 Protein Homology CDS 2254358 2255275 . - 0 ID=cds-WJG83073.1;Parent=gene-PUW38_11195;Dbxref=NCBI_GP:WJG83073.1;Name=WJG83073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=PUW38_11195;product=ABC transporter substrate-binding protein;protein_id=WJG83073.1;transl_table=11 CP118116.1 Genbank gene 2255456 2257753 . - . ID=gene-PUW38_11200;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=PUW38_11200 CP118116.1 Protein Homology CDS 2255456 2257753 . - 0 ID=cds-WJG83074.1;Parent=gene-PUW38_11200;Dbxref=NCBI_GP:WJG83074.1;Name=WJG83074.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=PUW38_11200;product=beta-glucosidase BglX;protein_id=WJG83074.1;transl_table=11 CP118116.1 Genbank gene 2258020 2259750 . + . ID=gene-PUW38_11205;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=PUW38_11205 CP118116.1 Protein Homology CDS 2258020 2259750 . + 0 ID=cds-WJG83075.1;Parent=gene-PUW38_11205;Dbxref=NCBI_GP:WJG83075.1;Name=WJG83075.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=PUW38_11205;product=D-lactate dehydrogenase;protein_id=WJG83075.1;transl_table=11 CP118116.1 Genbank gene 2259809 2260756 . - . ID=gene-PUW38_11210;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=PUW38_11210 CP118116.1 Protein Homology CDS 2259809 2260756 . - 0 ID=cds-WJG83076.1;Parent=gene-PUW38_11210;Dbxref=NCBI_GP:WJG83076.1;Name=WJG83076.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=PUW38_11210;product=D-alanyl-D-alanine endopeptidase;protein_id=WJG83076.1;transl_table=11 CP118116.1 Genbank gene 2260922 2261509 . - . ID=gene-PUW38_11215;Name=PUW38_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11215 CP118116.1 Protein Homology CDS 2260922 2261509 . - 0 ID=cds-WJG83077.1;Parent=gene-PUW38_11215;Dbxref=NCBI_GP:WJG83077.1;Name=WJG83077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=PUW38_11215;product=Yip1 family protein;protein_id=WJG83077.1;transl_table=11 CP118116.1 Genbank gene 2261668 2262237 . + . ID=gene-PUW38_11220;Name=PUW38_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11220 CP118116.1 Protein Homology CDS 2261668 2262237 . + 0 ID=cds-WJG83078.1;Parent=gene-PUW38_11220;Dbxref=NCBI_GP:WJG83078.1;Name=WJG83078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=PUW38_11220;product=DedA family protein;protein_id=WJG83078.1;transl_table=11 CP118116.1 Genbank pseudogene 2262286 2263048 . - . ID=gene-PUW38_11225;Name=PUW38_11225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11225;pseudo=true CP118116.1 Protein Homology CDS 2262286 2263048 . - 0 ID=cds-PUW38_11225;Parent=gene-PUW38_11225;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=PUW38_11225;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2263114 2264549 . - . ID=gene-PUW38_11230;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=pseudogene;locus_tag=PUW38_11230;pseudo=true CP118116.1 Protein Homology CDS 2263114 2264549 . - 0 ID=cds-PUW38_11230;Parent=gene-PUW38_11230;Note=frameshifted;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=PUW38_11230;product=multidrug resistance outer membrane protein MdtQ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2264867 2264950 . + . ID=gene-PUW38_11235;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=PUW38_11235 CP118116.1 Protein Homology CDS 2264867 2264950 . + 0 ID=cds-WJG83229.1;Parent=gene-PUW38_11235;Dbxref=NCBI_GP:WJG83229.1;Name=WJG83229.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=PUW38_11235;product=small membrane protein YohP;protein_id=WJG83229.1;transl_table=11 CP118116.1 Genbank gene 2265008 2265946 . - . ID=gene-PUW38_11240;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=PUW38_11240 CP118116.1 Protein Homology CDS 2265008 2265946 . - 0 ID=cds-WJG83079.1;Parent=gene-PUW38_11240;Dbxref=NCBI_GP:WJG83079.1;Name=WJG83079.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=PUW38_11240;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WJG83079.1;transl_table=11 CP118116.1 Genbank gene 2266055 2267248 . - . ID=gene-PUW38_11245;Name=PUW38_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11245 CP118116.1 Protein Homology CDS 2266055 2267248 . - 0 ID=cds-WJG83080.1;Parent=gene-PUW38_11245;Dbxref=NCBI_GP:WJG83080.1;Name=WJG83080.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=PUW38_11245;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WJG83080.1;transl_table=11 CP118116.1 Genbank gene 2267263 2267907 . - . ID=gene-PUW38_11250;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=PUW38_11250 CP118116.1 Protein Homology CDS 2267263 2267907 . - 0 ID=cds-WJG83081.1;Parent=gene-PUW38_11250;Dbxref=NCBI_GP:WJG83081.1;Name=WJG83081.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=PUW38_11250;product=maleylacetoacetate isomerase;protein_id=WJG83081.1;transl_table=11 CP118116.1 Genbank gene 2267916 2268617 . - . ID=gene-PUW38_11255;Name=PUW38_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11255 CP118116.1 Protein Homology CDS 2267916 2268617 . - 0 ID=cds-WJG83082.1;Parent=gene-PUW38_11255;Dbxref=NCBI_GP:WJG83082.1;Name=WJG83082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=PUW38_11255;product=fumarylacetoacetate hydrolase family protein;protein_id=WJG83082.1;transl_table=11 CP118116.1 Genbank gene 2268633 2269670 . - . ID=gene-PUW38_11260;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=PUW38_11260 CP118116.1 Protein Homology CDS 2268633 2269670 . - 0 ID=cds-WJG83083.1;Parent=gene-PUW38_11260;Dbxref=NCBI_GP:WJG83083.1;Name=WJG83083.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=PUW38_11260;product=gentisate 1%2C2-dioxygenase;protein_id=WJG83083.1;transl_table=11 CP118116.1 Genbank gene 2269682 2271040 . - . ID=gene-PUW38_11265;Name=PUW38_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11265 CP118116.1 Protein Homology CDS 2269682 2271040 . - 0 ID=cds-WJG83084.1;Parent=gene-PUW38_11265;Dbxref=NCBI_GP:WJG83084.1;Name=WJG83084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=PUW38_11265;product=aromatic acid/H+ symport family MFS transporter;protein_id=WJG83084.1;transl_table=11 CP118116.1 Genbank gene 2271166 2272023 . + . ID=gene-PUW38_11270;Name=PUW38_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11270 CP118116.1 Protein Homology CDS 2271166 2272023 . + 0 ID=cds-WJG83085.1;Parent=gene-PUW38_11270;Dbxref=NCBI_GP:WJG83085.1;Name=WJG83085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024655.1;locus_tag=PUW38_11270;product=LysR family transcriptional regulator;protein_id=WJG83085.1;transl_table=11 CP118116.1 Genbank gene 2272067 2272465 . + . ID=gene-PUW38_11275;Name=PUW38_11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11275 CP118116.1 Protein Homology CDS 2272067 2272465 . + 0 ID=cds-WJG83086.1;Parent=gene-PUW38_11275;Dbxref=NCBI_GP:WJG83086.1;Name=WJG83086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=PUW38_11275;product=CidA/LrgA family protein;protein_id=WJG83086.1;transl_table=11 CP118116.1 Genbank gene 2272462 2273157 . + . ID=gene-PUW38_11280;Name=PUW38_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11280 CP118116.1 Protein Homology CDS 2272462 2273157 . + 0 ID=cds-WJG83087.1;Parent=gene-PUW38_11280;Dbxref=NCBI_GP:WJG83087.1;Name=WJG83087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=PUW38_11280;product=CidB/LrgB family autolysis modulator;protein_id=WJG83087.1;transl_table=11 CP118116.1 Genbank gene 2273311 2274195 . + . ID=gene-PUW38_11285;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=PUW38_11285 CP118116.1 Protein Homology CDS 2273311 2274195 . + 0 ID=cds-WJG83088.1;Parent=gene-PUW38_11285;Dbxref=NCBI_GP:WJG83088.1;Name=WJG83088.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=PUW38_11285;product=cytidine deaminase;protein_id=WJG83088.1;transl_table=11 CP118116.1 Genbank gene 2274372 2275091 . + . ID=gene-PUW38_11290;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=PUW38_11290 CP118116.1 Protein Homology CDS 2274372 2275091 . + 0 ID=cds-WJG83089.1;Parent=gene-PUW38_11290;Dbxref=NCBI_GP:WJG83089.1;Name=WJG83089.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=PUW38_11290;product=outer membrane permeability protein SanA;protein_id=WJG83089.1;transl_table=11 CP118116.1 Genbank gene 2275088 2275333 . + . ID=gene-PUW38_11295;Name=PUW38_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11295 CP118116.1 Protein Homology CDS 2275088 2275333 . + 0 ID=cds-WJG83090.1;Parent=gene-PUW38_11295;Dbxref=NCBI_GP:WJG83090.1;Name=WJG83090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=PUW38_11295;product=DUF2542 family protein;protein_id=WJG83090.1;transl_table=11 CP118116.1 Genbank gene 2275538 2276779 . + . ID=gene-PUW38_11300;Name=PUW38_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11300 CP118116.1 Protein Homology CDS 2275538 2276779 . + 0 ID=cds-WJG83091.1;Parent=gene-PUW38_11300;Dbxref=NCBI_GP:WJG83091.1;Name=WJG83091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=PUW38_11300;product=NAD(P)-dependent oxidoreductase;protein_id=WJG83091.1;transl_table=11 CP118116.1 Genbank gene 2276773 2278008 . + . ID=gene-PUW38_11305;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=PUW38_11305 CP118116.1 Protein Homology CDS 2276773 2278008 . + 0 ID=cds-WJG83092.1;Parent=gene-PUW38_11305;Dbxref=NCBI_GP:WJG83092.1;Name=WJG83092.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=PUW38_11305;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WJG83092.1;transl_table=11 CP118116.1 Genbank gene 2278083 2279093 . - . ID=gene-PUW38_11310;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=PUW38_11310 CP118116.1 Protein Homology CDS 2278083 2279093 . - 0 ID=cds-WJG83093.1;Parent=gene-PUW38_11310;Dbxref=NCBI_GP:WJG83093.1;Name=WJG83093.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=PUW38_11310;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WJG83093.1;transl_table=11 CP118116.1 Genbank pseudogene 2279109 2280627 . - . ID=gene-PUW38_11315;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=pseudogene;locus_tag=PUW38_11315;pseudo=true CP118116.1 Protein Homology CDS 2279109 2280627 . - 0 ID=cds-PUW38_11315;Parent=gene-PUW38_11315;Note=frameshifted;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=PUW38_11315;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2280761 2281759 . - . ID=gene-PUW38_11320;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=PUW38_11320 CP118116.1 Protein Homology CDS 2280761 2281759 . - 0 ID=cds-WJG83094.1;Parent=gene-PUW38_11320;Dbxref=NCBI_GP:WJG83094.1;Name=WJG83094.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=PUW38_11320;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WJG83094.1;transl_table=11 CP118116.1 Genbank gene 2282258 2283280 . - . ID=gene-PUW38_11325;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=PUW38_11325 CP118116.1 Protein Homology CDS 2282258 2283280 . - 0 ID=cds-WJG83095.1;Parent=gene-PUW38_11325;Dbxref=NCBI_GP:WJG83095.1;Name=WJG83095.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=PUW38_11325;product=HTH-type transcriptional regulator GalS;protein_id=WJG83095.1;transl_table=11 CP118116.1 Genbank gene 2283430 2284572 . - . ID=gene-PUW38_11330;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=PUW38_11330 CP118116.1 Protein Homology CDS 2283430 2284572 . - 0 ID=cds-WJG83096.1;Parent=gene-PUW38_11330;Dbxref=NCBI_GP:WJG83096.1;Name=WJG83096.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=PUW38_11330;product=DUF418 domain-containing protein YeiB;protein_id=WJG83096.1;transl_table=11 CP118116.1 Genbank gene 2284587 2285255 . - . ID=gene-PUW38_11335;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=PUW38_11335 CP118116.1 Protein Homology CDS 2284587 2285255 . - 0 ID=cds-WJG83097.1;Parent=gene-PUW38_11335;Dbxref=NCBI_GP:WJG83097.1;Name=WJG83097.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=PUW38_11335;product=GTP cyclohydrolase I FolE;protein_id=WJG83097.1;transl_table=11 CP118116.1 Genbank gene 2285585 2286442 . + . ID=gene-PUW38_11340;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=PUW38_11340 CP118116.1 Protein Homology CDS 2285585 2286442 . + 0 ID=cds-WJG83098.1;Parent=gene-PUW38_11340;Dbxref=NCBI_GP:WJG83098.1;Name=WJG83098.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=PUW38_11340;product=S-formylglutathione hydrolase;protein_id=WJG83098.1;transl_table=11 CP118116.1 Genbank gene 2286431 2286820 . - . ID=gene-PUW38_11345;Name=PUW38_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11345 CP118116.1 Protein Homology CDS 2286431 2286820 . - 0 ID=cds-WJG83099.1;Parent=gene-PUW38_11345;Dbxref=NCBI_GP:WJG83099.1;Name=WJG83099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=PUW38_11345;product=helix-turn-helix transcriptional regulator;protein_id=WJG83099.1;transl_table=11 CP118116.1 Genbank gene 2286825 2288192 . - . ID=gene-PUW38_11350;Name=PUW38_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11350 CP118116.1 Protein Homology CDS 2286825 2288192 . - 0 ID=cds-WJG83100.1;Parent=gene-PUW38_11350;Dbxref=NCBI_GP:WJG83100.1;Name=WJG83100.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=PUW38_11350;product=L-serine ammonia-lyase;protein_id=WJG83100.1;transl_table=11 CP118116.1 Genbank gene 2288409 2289296 . + . ID=gene-PUW38_11355;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PUW38_11355 CP118116.1 Protein Homology CDS 2288409 2289296 . + 0 ID=cds-WJG83101.1;Parent=gene-PUW38_11355;Dbxref=NCBI_GP:WJG83101.1;Name=WJG83101.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=PUW38_11355;product=phosphoserine phosphatase SerB;protein_id=WJG83101.1;transl_table=11 CP118116.1 Genbank pseudogene 2289329 2290649 . + . ID=gene-PUW38_11360;Name=PUW38_11360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11360;pseudo=true CP118116.1 Protein Homology CDS 2289329 2290649 . + 0 ID=cds-PUW38_11360;Parent=gene-PUW38_11360;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=PUW38_11360;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2290693 2292683 . - . ID=gene-PUW38_11365;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=pseudogene;locus_tag=PUW38_11365;pseudo=true CP118116.1 Protein Homology CDS 2290693 2292683 . - 0 ID=cds-PUW38_11365;Parent=gene-PUW38_11365;Note=frameshifted;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=PUW38_11365;product=catecholate siderophore receptor CirA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2293029 2294498 . - . ID=gene-PUW38_11370;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=PUW38_11370 CP118116.1 Protein Homology CDS 2293029 2294498 . - 0 ID=cds-WJG83102.1;Parent=gene-PUW38_11370;Dbxref=NCBI_GP:WJG83102.1;Name=WJG83102.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=PUW38_11370;product=lysine-specific permease;protein_id=WJG83102.1;transl_table=11 CP118116.1 Genbank gene 2294688 2295551 . - . ID=gene-PUW38_11375;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=PUW38_11375 CP118116.1 Protein Homology CDS 2294688 2295551 . - 0 ID=cds-WJG83103.1;Parent=gene-PUW38_11375;Dbxref=NCBI_GP:WJG83103.1;Name=WJG83103.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=PUW38_11375;product=DNA-binding transcriptional regulator YeiE;protein_id=WJG83103.1;transl_table=11 CP118116.1 Genbank pseudogene 2295672 2296720 . + . ID=gene-PUW38_11380;Name=PUW38_11380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11380;pseudo=true CP118116.1 Protein Homology CDS 2295672 2296720 . + 0 ID=cds-PUW38_11380;Parent=gene-PUW38_11380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=PUW38_11380;product=YeiH family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2296799 2297656 . + . ID=gene-PUW38_11385;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=PUW38_11385 CP118116.1 Protein Homology CDS 2296799 2297656 . + 0 ID=cds-WJG83104.1;Parent=gene-PUW38_11385;Dbxref=NCBI_GP:WJG83104.1;Name=WJG83104.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=PUW38_11385;product=deoxyribonuclease IV;protein_id=WJG83104.1;transl_table=11 CP118116.1 Genbank gene 2297721 2299409 . - . ID=gene-PUW38_11390;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=PUW38_11390 CP118116.1 Protein Homology CDS 2297721 2299409 . - 0 ID=cds-WJG83105.1;Parent=gene-PUW38_11390;Dbxref=NCBI_GP:WJG83105.1;Name=WJG83105.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=PUW38_11390;product=PTS fructose transporter subunit IIBC;protein_id=WJG83105.1;transl_table=11 CP118116.1 Genbank gene 2299426 2300364 . - . ID=gene-PUW38_11395;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=PUW38_11395 CP118116.1 Protein Homology CDS 2299426 2300364 . - 0 ID=cds-WJG83106.1;Parent=gene-PUW38_11395;Dbxref=NCBI_GP:WJG83106.1;Name=WJG83106.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=PUW38_11395;product=1-phosphofructokinase;protein_id=WJG83106.1;transl_table=11 CP118116.1 Genbank pseudogene 2300364 2301493 . - . ID=gene-PUW38_11400;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=pseudogene;locus_tag=PUW38_11400;pseudo=true CP118116.1 Protein Homology CDS 2300364 2301493 . - 0 ID=cds-PUW38_11400;Parent=gene-PUW38_11400;Note=frameshifted;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=PUW38_11400;product=fused PTS fructose transporter subunit IIA/HPr protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2301862 2303043 . + . ID=gene-PUW38_11405;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=PUW38_11405 CP118116.1 Protein Homology CDS 2301862 2303043 . + 0 ID=cds-WJG83107.1;Parent=gene-PUW38_11405;Dbxref=NCBI_GP:WJG83107.1;Name=WJG83107.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=PUW38_11405;product=sugar efflux transporter SetB;protein_id=WJG83107.1;transl_table=11 CP118116.1 Genbank gene 2303107 2303772 . - . ID=gene-PUW38_11410;Name=PUW38_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11410 CP118116.1 Protein Homology CDS 2303107 2303772 . - 0 ID=cds-WJG83108.1;Parent=gene-PUW38_11410;Dbxref=NCBI_GP:WJG83108.1;Name=WJG83108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=PUW38_11410;product=GNVR domain-containing protein;protein_id=WJG83108.1;transl_table=11 CP118116.1 Genbank gene 2303774 2303896 . - . ID=gene-PUW38_11415;Name=PUW38_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11415 CP118116.1 Protein Homology CDS 2303774 2303896 . - 0 ID=cds-WJG83109.1;Parent=gene-PUW38_11415;Dbxref=NCBI_GP:WJG83109.1;Name=WJG83109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=PUW38_11415;product=hypothetical protein;protein_id=WJG83109.1;transl_table=11 CP118116.1 Genbank pseudogene 2304284 2304539 . - . ID=gene-PUW38_11420;Name=PUW38_11420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11420;pseudo=true CP118116.1 Protein Homology CDS 2304284 2304539 . - 0 ID=cds-PUW38_11420;Parent=gene-PUW38_11420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=PUW38_11420;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2304864 2305436 . + . ID=gene-PUW38_11425;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=PUW38_11425 CP118116.1 Protein Homology CDS 2304864 2305436 . + 0 ID=cds-WJG83110.1;Parent=gene-PUW38_11425;Dbxref=NCBI_GP:WJG83110.1;Name=WJG83110.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=PUW38_11425;product=elongation factor P-like protein YeiP;protein_id=WJG83110.1;transl_table=11 CP118116.1 Genbank gene 2305649 2306635 . + . ID=gene-PUW38_11430;Name=PUW38_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11430 CP118116.1 Protein Homology CDS 2305649 2306635 . + 0 ID=cds-WJG83111.1;Parent=gene-PUW38_11430;Dbxref=NCBI_GP:WJG83111.1;Name=WJG83111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=PUW38_11430;product=GTP-binding protein;protein_id=WJG83111.1;transl_table=11 CP118116.1 Genbank gene 2306665 2307384 . + . ID=gene-PUW38_11435;Name=PUW38_11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11435 CP118116.1 Protein Homology CDS 2306665 2307384 . + 0 ID=cds-WJG83112.1;Parent=gene-PUW38_11435;Dbxref=NCBI_GP:WJG83112.1;Name=WJG83112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=PUW38_11435;product=phosphatase PAP2 family protein;protein_id=WJG83112.1;transl_table=11 CP118116.1 Genbank gene 2307798 2308370 . + . ID=gene-PUW38_11440;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=PUW38_11440 CP118116.1 Protein Homology CDS 2307798 2308370 . + 0 ID=cds-WJG83113.1;Parent=gene-PUW38_11440;Dbxref=NCBI_GP:WJG83113.1;Name=WJG83113.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=PUW38_11440;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WJG83113.1;transl_table=11 CP118116.1 Genbank pseudogene 2308696 2310252 . + . ID=gene-PUW38_11445;Name=PUW38_11445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11445;pseudo=true CP118116.1 Protein Homology CDS 2308696 2310252 . + 0 ID=cds-PUW38_11445;Parent=gene-PUW38_11445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=PUW38_11445;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2310359 2312164 . + . ID=gene-PUW38_11450;Name=PUW38_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11450 CP118116.1 Protein Homology CDS 2310359 2312164 . + 0 ID=cds-WJG83114.1;Parent=gene-PUW38_11450;Dbxref=NCBI_GP:WJG83114.1;Name=WJG83114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=PUW38_11450;product=extracellular solute-binding protein;protein_id=WJG83114.1;transl_table=11 CP118116.1 Genbank gene 2312174 2313268 . + . ID=gene-PUW38_11455;Name=PUW38_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11455 CP118116.1 Protein Homology CDS 2312174 2313268 . + 0 ID=cds-WJG83115.1;Parent=gene-PUW38_11455;Dbxref=NCBI_GP:WJG83115.1;Name=WJG83115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=PUW38_11455;product=microcin C ABC transporter permease YejB;protein_id=WJG83115.1;transl_table=11 CP118116.1 Genbank gene 2313268 2314293 . + . ID=gene-PUW38_11460;Name=PUW38_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11460 CP118116.1 Protein Homology CDS 2313268 2314293 . + 0 ID=cds-WJG83116.1;Parent=gene-PUW38_11460;Dbxref=NCBI_GP:WJG83116.1;Name=WJG83116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=PUW38_11460;product=ABC transporter permease;protein_id=WJG83116.1;transl_table=11 CP118116.1 Genbank gene 2314295 2315884 . + . ID=gene-PUW38_11465;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=PUW38_11465 CP118116.1 Protein Homology CDS 2314295 2315884 . + 0 ID=cds-WJG83117.1;Parent=gene-PUW38_11465;Dbxref=NCBI_GP:WJG83117.1;Name=WJG83117.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=PUW38_11465;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WJG83117.1;transl_table=11 CP118116.1 Genbank gene 2315888 2316232 . - . ID=gene-PUW38_11470;Name=PUW38_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11470 CP118116.1 Protein Homology CDS 2315888 2316232 . - 0 ID=cds-WJG83118.1;Parent=gene-PUW38_11470;Dbxref=NCBI_GP:WJG83118.1;Name=WJG83118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=PUW38_11470;product=YejG family protein;protein_id=WJG83118.1;transl_table=11 CP118116.1 Genbank gene 2316623 2317813 . - . ID=gene-PUW38_11475;Name=PUW38_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11475 CP118116.1 Protein Homology CDS 2316623 2317813 . - 0 ID=cds-WJG83119.1;Parent=gene-PUW38_11475;Dbxref=NCBI_GP:WJG83119.1;Name=WJG83119.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=PUW38_11475;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WJG83119.1;transl_table=11 CP118116.1 Genbank gene 2317841 2318536 . - . ID=gene-PUW38_11480;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=PUW38_11480 CP118116.1 Protein Homology CDS 2317841 2318536 . - 0 ID=cds-WJG83120.1;Parent=gene-PUW38_11480;Dbxref=NCBI_GP:WJG83120.1;Name=WJG83120.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=PUW38_11480;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WJG83120.1;transl_table=11 CP118116.1 Genbank gene 2318688 2320448 . + . ID=gene-PUW38_11485;Name=PUW38_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11485 CP118116.1 Protein Homology CDS 2318688 2320448 . + 0 ID=cds-WJG83121.1;Parent=gene-PUW38_11485;Dbxref=NCBI_GP:WJG83121.1;Name=WJG83121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=PUW38_11485;product=DEAD/DEAH box helicase;protein_id=WJG83121.1;transl_table=11 CP118116.1 Genbank gene 2320573 2320857 . + . ID=gene-PUW38_11490;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=PUW38_11490 CP118116.1 Protein Homology CDS 2320573 2320857 . + 0 ID=cds-WJG83122.1;Parent=gene-PUW38_11490;Dbxref=NCBI_GP:WJG83122.1;Name=WJG83122.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=PUW38_11490;product=50S ribosomal protein L25;protein_id=WJG83122.1;transl_table=11 CP118116.1 Genbank gene 2320965 2321585 . - . ID=gene-PUW38_11495;Name=PUW38_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11495 CP118116.1 Protein Homology CDS 2320965 2321585 . - 0 ID=cds-WJG83123.1;Parent=gene-PUW38_11495;Dbxref=NCBI_GP:WJG83123.1;Name=WJG83123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=PUW38_11495;product=hypothetical protein;protein_id=WJG83123.1;transl_table=11 CP118116.1 Genbank gene 2321613 2322620 . - . ID=gene-PUW38_11500;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=PUW38_11500 CP118116.1 Protein Homology CDS 2321613 2322620 . - 0 ID=cds-WJG83124.1;Parent=gene-PUW38_11500;Dbxref=NCBI_GP:WJG83124.1;Name=WJG83124.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=PUW38_11500;product=nucleoid-associated protein YejK;protein_id=WJG83124.1;transl_table=11 CP118116.1 Genbank gene 2322800 2323027 . + . ID=gene-PUW38_11505;Name=PUW38_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11505 CP118116.1 Protein Homology CDS 2322800 2323027 . + 0 ID=cds-WJG83125.1;Parent=gene-PUW38_11505;Dbxref=NCBI_GP:WJG83125.1;Name=WJG83125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=PUW38_11505;product=YejL family protein;protein_id=WJG83125.1;transl_table=11 CP118116.1 Genbank gene 2323059 2324819 . + . ID=gene-PUW38_11510;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=PUW38_11510 CP118116.1 Protein Homology CDS 2323059 2324819 . + 0 ID=cds-WJG83126.1;Parent=gene-PUW38_11510;Dbxref=NCBI_GP:WJG83126.1;Name=WJG83126.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=PUW38_11510;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WJG83126.1;transl_table=11 CP118116.1 Genbank gene 2324893 2324969 . + . ID=gene-PUW38_11515;Name=PUW38_11515;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_11515 CP118116.1 tRNAscan-SE tRNA 2324893 2324969 . + . ID=rna-PUW38_11515;Parent=gene-PUW38_11515;anticodon=(pos:2324927..2324929);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_11515;product=tRNA-Pro CP118116.1 tRNAscan-SE exon 2324893 2324969 . + . ID=exon-PUW38_11515-1;Parent=rna-PUW38_11515;anticodon=(pos:2324927..2324929);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_11515;product=tRNA-Pro CP118116.1 Genbank pseudogene 2324925 2325023 . + . ID=gene-PUW38_11520;Name=PUW38_11520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11520;pseudo=true CP118116.1 Protein Homology CDS 2324925 2325023 . + 0 ID=cds-PUW38_11520;Parent=gene-PUW38_11520;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=PUW38_11520;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2325280 2325577 . - . ID=gene-PUW38_11525;Name=PUW38_11525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11525;pseudo=true CP118116.1 Protein Homology CDS 2325280 2325577 . - 0 ID=cds-PUW38_11525;Parent=gene-PUW38_11525;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457662.1;locus_tag=PUW38_11525;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2325590 2326402 . - . ID=gene-PUW38_11530;Name=PUW38_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11530 CP118116.1 Protein Homology CDS 2325590 2326402 . - 0 ID=cds-WJG83127.1;Parent=gene-PUW38_11530;Dbxref=NCBI_GP:WJG83127.1;Name=WJG83127.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: protein motif:HMM:NF025849.2;locus_tag=PUW38_11530;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WJG83127.1;transl_table=11 CP118116.1 Genbank gene 2326383 2327375 . - . ID=gene-PUW38_11535;Name=PUW38_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11535 CP118116.1 GeneMarkS-2+ CDS 2326383 2327375 . - 0 ID=cds-WJG83128.1;Parent=gene-PUW38_11535;Dbxref=NCBI_GP:WJG83128.1;Name=WJG83128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_11535;product=hypothetical protein;protein_id=WJG83128.1;transl_table=11 CP118116.1 Genbank pseudogene 2327592 2327957 . - . ID=gene-PUW38_11540;Name=PUW38_11540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11540;pseudo=true CP118116.1 Protein Homology CDS 2327592 2327957 . - 0 ID=cds-PUW38_11540;Parent=gene-PUW38_11540;Note=secreted by salmonella pathogenicity island 2%3B involved in survival of Salmonella in host cells%3B interferes with host cell ubiquination pathway%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460026.1;locus_tag=PUW38_11540;product=E3 ubiquitin--protein ligase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2328126 2328329 . - . ID=gene-PUW38_11545;Name=PUW38_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11545 CP118116.1 Protein Homology CDS 2328126 2328329 . - 0 ID=cds-WJG83129.1;Parent=gene-PUW38_11545;Dbxref=NCBI_GP:WJG83129.1;Name=WJG83129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461185.1;locus_tag=PUW38_11545;product=phage tail protein;protein_id=WJG83129.1;transl_table=11 CP118116.1 Genbank pseudogene 2328625 2329416 . - . ID=gene-PUW38_11550;Name=PUW38_11550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11550;pseudo=true CP118116.1 Protein Homology CDS 2328625 2329416 . - 0 ID=cds-PUW38_11550;Parent=gene-PUW38_11550;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461186.1;locus_tag=PUW38_11550;product=tail fiber protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2329532 2329690 . + . ID=gene-PUW38_11555;Name=PUW38_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11555 CP118116.1 GeneMarkS-2+ CDS 2329532 2329690 . + 0 ID=cds-WJG79539.1;Parent=gene-PUW38_11555;Dbxref=NCBI_GP:WJG79539.1;Name=WJG79539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_11555;product=hypothetical protein;protein_id=WJG79539.1;transl_table=11 CP118116.1 Genbank gene 2329719 2329922 . + . ID=gene-PUW38_11560;Name=PUW38_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11560 CP118116.1 Protein Homology CDS 2329719 2329922 . + 0 ID=cds-WJG83230.1;Parent=gene-PUW38_11560;Dbxref=NCBI_GP:WJG83230.1;Name=WJG83230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=PUW38_11560;product=DinI-like family protein;protein_id=WJG83230.1;transl_table=11 CP118116.1 Genbank gene 2330114 2330677 . - . ID=gene-PUW38_11565;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=PUW38_11565 CP118116.1 Protein Homology CDS 2330114 2330677 . - 0 ID=cds-WJG79540.1;Parent=gene-PUW38_11565;Dbxref=NCBI_GP:WJG79540.1;Name=WJG79540.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=PUW38_11565;product=lipid A 3-O-deacylase PagL;protein_id=WJG79540.1;transl_table=11 CP118116.1 Genbank gene 2331407 2332054 . + . ID=gene-PUW38_11570;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=PUW38_11570 CP118116.1 Protein Homology CDS 2331407 2332054 . + 0 ID=cds-WJG83231.1;Parent=gene-PUW38_11570;Dbxref=NCBI_GP:WJG83231.1;Name=WJG83231.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=PUW38_11570;product=nitrate/nitrite response regulator protein NarP;protein_id=WJG83231.1;transl_table=11 CP118116.1 Genbank gene 2332098 2333150 . - . ID=gene-PUW38_11575;Name=PUW38_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11575 CP118116.1 Protein Homology CDS 2332098 2333150 . - 0 ID=cds-WJG79541.1;Parent=gene-PUW38_11575;Dbxref=NCBI_GP:WJG79541.1;Name=WJG79541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=PUW38_11575;product=cytochrome c-type biogenesis protein CcmH;protein_id=WJG79541.1;transl_table=11 CP118116.1 Genbank gene 2333147 2333704 . - . ID=gene-PUW38_11580;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PUW38_11580 CP118116.1 Protein Homology CDS 2333147 2333704 . - 0 ID=cds-WJG79542.1;Parent=gene-PUW38_11580;Dbxref=NCBI_GP:WJG79542.1;Name=WJG79542.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=PUW38_11580;product=thiol:disulfide interchange protein DsbE;protein_id=WJG79542.1;transl_table=11 CP118116.1 Genbank gene 2333701 2335632 . - . ID=gene-PUW38_11585;Name=PUW38_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11585 CP118116.1 Protein Homology CDS 2333701 2335632 . - 0 ID=cds-WJG79543.1;Parent=gene-PUW38_11585;Dbxref=NCBI_GP:WJG79543.1;Name=WJG79543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=PUW38_11585;product=heme lyase CcmF/NrfE family subunit;protein_id=WJG79543.1;transl_table=11 CP118116.1 Genbank gene 2335629 2336108 . - . ID=gene-PUW38_11590;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PUW38_11590 CP118116.1 Protein Homology CDS 2335629 2336108 . - 0 ID=cds-WJG79544.1;Parent=gene-PUW38_11590;Dbxref=NCBI_GP:WJG79544.1;Name=WJG79544.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=PUW38_11590;product=cytochrome c maturation protein CcmE;protein_id=WJG79544.1;transl_table=11 CP118116.1 Genbank gene 2336105 2336317 . - . ID=gene-PUW38_11595;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PUW38_11595 CP118116.1 Protein Homology CDS 2336105 2336317 . - 0 ID=cds-WJG79545.1;Parent=gene-PUW38_11595;Dbxref=NCBI_GP:WJG79545.1;Name=WJG79545.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=PUW38_11595;product=heme exporter protein CcmD;protein_id=WJG79545.1;transl_table=11 CP118116.1 Genbank gene 2336314 2337051 . - . ID=gene-PUW38_11600;Name=PUW38_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11600 CP118116.1 Protein Homology CDS 2336314 2337051 . - 0 ID=cds-WJG79546.1;Parent=gene-PUW38_11600;Dbxref=NCBI_GP:WJG79546.1;Name=WJG79546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=PUW38_11600;product=heme ABC transporter permease;protein_id=WJG79546.1;transl_table=11 CP118116.1 Genbank gene 2337103 2337762 . - . ID=gene-PUW38_11605;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PUW38_11605 CP118116.1 Protein Homology CDS 2337103 2337762 . - 0 ID=cds-WJG79547.1;Parent=gene-PUW38_11605;Dbxref=NCBI_GP:WJG79547.1;Name=WJG79547.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=PUW38_11605;product=heme exporter protein CcmB;protein_id=WJG79547.1;transl_table=11 CP118116.1 Genbank gene 2337759 2338376 . - . ID=gene-PUW38_11610;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PUW38_11610 CP118116.1 Protein Homology CDS 2337759 2338376 . - 0 ID=cds-WJG79548.1;Parent=gene-PUW38_11610;Dbxref=NCBI_GP:WJG79548.1;Name=WJG79548.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=PUW38_11610;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WJG79548.1;transl_table=11 CP118116.1 Genbank gene 2338397 2338999 . - . ID=gene-PUW38_11615;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=PUW38_11615 CP118116.1 Protein Homology CDS 2338397 2338999 . - 0 ID=cds-WJG79549.1;Parent=gene-PUW38_11615;Dbxref=NCBI_GP:WJG79549.1;Name=WJG79549.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=PUW38_11615;product=cytochrome c-type protein NapC;protein_id=WJG79549.1;transl_table=11 CP118116.1 Genbank gene 2339009 2339458 . - . ID=gene-PUW38_11620;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=PUW38_11620 CP118116.1 Protein Homology CDS 2339009 2339458 . - 0 ID=cds-WJG79550.1;Parent=gene-PUW38_11620;Dbxref=NCBI_GP:WJG79550.1;Name=WJG79550.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=PUW38_11620;product=nitrate reductase cytochrome c-type subunit;protein_id=WJG79550.1;transl_table=11 CP118116.1 Genbank gene 2339574 2340443 . - . ID=gene-PUW38_11625;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=PUW38_11625 CP118116.1 Protein Homology CDS 2339574 2340443 . - 0 ID=cds-WJG79551.1;Parent=gene-PUW38_11625;Dbxref=NCBI_GP:WJG79551.1;Name=WJG79551.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=PUW38_11625;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WJG79551.1;transl_table=11 CP118116.1 Genbank gene 2340430 2341125 . - . ID=gene-PUW38_11630;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=PUW38_11630 CP118116.1 Protein Homology CDS 2340430 2341125 . - 0 ID=cds-WJG79552.1;Parent=gene-PUW38_11630;Dbxref=NCBI_GP:WJG79552.1;Name=WJG79552.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=PUW38_11630;product=ferredoxin-type protein NapG;protein_id=WJG79552.1;transl_table=11 CP118116.1 Genbank gene 2341132 2343618 . - . ID=gene-PUW38_11635;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=PUW38_11635 CP118116.1 Protein Homology CDS 2341132 2343618 . - 0 ID=cds-WJG79553.1;Parent=gene-PUW38_11635;Dbxref=NCBI_GP:WJG79553.1;Name=WJG79553.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=PUW38_11635;product=nitrate reductase catalytic subunit NapA;protein_id=WJG79553.1;transl_table=11 CP118116.1 Genbank gene 2343615 2343878 . - . ID=gene-PUW38_11640;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=PUW38_11640 CP118116.1 Protein Homology CDS 2343615 2343878 . - 0 ID=cds-WJG79554.1;Parent=gene-PUW38_11640;Dbxref=NCBI_GP:WJG79554.1;Name=WJG79554.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=PUW38_11640;product=chaperone NapD;protein_id=WJG79554.1;transl_table=11 CP118116.1 Genbank gene 2343868 2344359 . - . ID=gene-PUW38_11645;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=PUW38_11645 CP118116.1 Protein Homology CDS 2343868 2344359 . - 0 ID=cds-WJG79555.1;Parent=gene-PUW38_11645;Dbxref=NCBI_GP:WJG79555.1;Name=WJG79555.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=PUW38_11645;product=ferredoxin-type protein NapF;protein_id=WJG79555.1;transl_table=11 CP118116.1 Genbank gene 2344773 2345267 . + . ID=gene-PUW38_11650;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=PUW38_11650 CP118116.1 Protein Homology CDS 2344773 2345267 . + 0 ID=cds-WJG83232.1;Parent=gene-PUW38_11650;Dbxref=NCBI_GP:WJG83232.1;Name=WJG83232.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=PUW38_11650;product=serine protease inhibitor ecotin;protein_id=WJG83232.1;transl_table=11 CP118116.1 Genbank gene 2345450 2347093 . - . ID=gene-PUW38_11655;Name=PUW38_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11655 CP118116.1 Protein Homology CDS 2345450 2347093 . - 0 ID=cds-WJG79556.1;Parent=gene-PUW38_11655;Dbxref=NCBI_GP:WJG79556.1;Name=WJG79556.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=PUW38_11655;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WJG79556.1;transl_table=11 CP118116.1 Genbank gene 2347167 2347817 . - . ID=gene-PUW38_11660;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=PUW38_11660 CP118116.1 Protein Homology CDS 2347167 2347817 . - 0 ID=cds-WJG79557.1;Parent=gene-PUW38_11660;Dbxref=NCBI_GP:WJG79557.1;Name=WJG79557.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=PUW38_11660;product=DNA oxidative demethylase AlkB;protein_id=WJG79557.1;transl_table=11 CP118116.1 Genbank gene 2347820 2348881 . - . ID=gene-PUW38_11665;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=PUW38_11665 CP118116.1 Protein Homology CDS 2347820 2348881 . - 0 ID=cds-WJG79558.1;Parent=gene-PUW38_11665;Dbxref=NCBI_GP:WJG79558.1;Name=WJG79558.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=PUW38_11665;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WJG79558.1;transl_table=11 CP118116.1 Genbank pseudogene 2348962 2350013 . - . ID=gene-PUW38_11670;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=pseudogene;locus_tag=PUW38_11670;pseudo=true CP118116.1 Protein Homology CDS 2348962 2350013 . - 0 ID=cds-PUW38_11670;Parent=gene-PUW38_11670;Note=frameshifted;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=PUW38_11670;product=FAD:protein FMN transferase ApbE;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2350128 2351264 . - . ID=gene-PUW38_11675;Name=PUW38_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11675 CP118116.1 Protein Homology CDS 2350128 2351264 . - 0 ID=cds-WJG79559.1;Parent=gene-PUW38_11675;Dbxref=NCBI_GP:WJG79559.1;Name=WJG79559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=PUW38_11675;product=porin OmpC;protein_id=WJG79559.1;transl_table=11 CP118116.1 Genbank gene 2351991 2354660 . + . ID=gene-PUW38_11680;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=PUW38_11680 CP118116.1 Protein Homology CDS 2351991 2354660 . + 0 ID=cds-WJG79560.1;Parent=gene-PUW38_11680;Dbxref=NCBI_GP:WJG79560.1;Name=WJG79560.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=PUW38_11680;product=phosphotransferase RcsD;protein_id=WJG79560.1;transl_table=11 CP118116.1 Genbank gene 2354677 2355327 . + . ID=gene-PUW38_11685;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=PUW38_11685 CP118116.1 Protein Homology CDS 2354677 2355327 . + 0 ID=cds-WJG79561.1;Parent=gene-PUW38_11685;Dbxref=NCBI_GP:WJG79561.1;Name=WJG79561.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=PUW38_11685;product=response regulator transcription factor RcsB;protein_id=WJG79561.1;transl_table=11 CP118116.1 Genbank gene 2355430 2358276 . - . ID=gene-PUW38_11690;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=PUW38_11690 CP118116.1 Protein Homology CDS 2355430 2358276 . - 0 ID=cds-WJG79562.1;Parent=gene-PUW38_11690;Dbxref=NCBI_GP:WJG79562.1;Name=WJG79562.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=PUW38_11690;product=two-component system sensor histidine kinase RcsC;protein_id=WJG79562.1;transl_table=11 CP118116.1 Genbank gene 2358394 2361030 . - . ID=gene-PUW38_11695;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=PUW38_11695 CP118116.1 Protein Homology CDS 2358394 2361030 . - 0 ID=cds-WJG79563.1;Parent=gene-PUW38_11695;Dbxref=NCBI_GP:WJG79563.1;Name=WJG79563.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=PUW38_11695;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WJG79563.1;transl_table=11 CP118116.1 Genbank gene 2361439 2362641 . - . ID=gene-PUW38_11700;Name=PUW38_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11700 CP118116.1 Protein Homology CDS 2361439 2362641 . - 0 ID=cds-WJG79564.1;Parent=gene-PUW38_11700;Dbxref=NCBI_GP:WJG79564.1;Name=WJG79564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=PUW38_11700;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WJG79564.1;transl_table=11 CP118116.1 Genbank pseudogene 2362656 2363980 . - . ID=gene-PUW38_11705;Name=PUW38_11705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_11705;pseudo=true CP118116.1 Protein Homology CDS 2362656 2363980 . - 0 ID=cds-PUW38_11705;Parent=gene-PUW38_11705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=PUW38_11705;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2364030 2364914 . + . ID=gene-PUW38_11710;Name=PUW38_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11710 CP118116.1 Protein Homology CDS 2364030 2364914 . + 0 ID=cds-WJG79565.1;Parent=gene-PUW38_11710;Dbxref=NCBI_GP:WJG79565.1;Name=WJG79565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=PUW38_11710;product=GntR family transcriptional regulator;protein_id=WJG79565.1;transl_table=11 CP118116.1 Genbank gene 2364997 2365725 . + . ID=gene-PUW38_11715;Name=PUW38_11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11715 CP118116.1 Protein Homology CDS 2364997 2365725 . + 0 ID=cds-WJG79566.1;Parent=gene-PUW38_11715;Dbxref=NCBI_GP:WJG79566.1;Name=WJG79566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=PUW38_11715;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WJG79566.1;transl_table=11 CP118116.1 Genbank gene 2366080 2368365 . + . ID=gene-PUW38_11720;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=PUW38_11720 CP118116.1 Protein Homology CDS 2366080 2368365 . + 0 ID=cds-WJG79567.1;Parent=gene-PUW38_11720;Dbxref=NCBI_GP:WJG79567.1;Name=WJG79567.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=PUW38_11720;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WJG79567.1;transl_table=11 CP118116.1 Genbank gene 2368478 2369608 . + . ID=gene-PUW38_11725;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=PUW38_11725 CP118116.1 Protein Homology CDS 2368478 2369608 . + 0 ID=cds-WJG79568.1;Parent=gene-PUW38_11725;Dbxref=NCBI_GP:WJG79568.1;Name=WJG79568.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=PUW38_11725;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WJG79568.1;transl_table=11 CP118116.1 Genbank gene 2369608 2369862 . + . ID=gene-PUW38_11730;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=PUW38_11730 CP118116.1 Protein Homology CDS 2369608 2369862 . + 0 ID=cds-WJG79569.1;Parent=gene-PUW38_11730;Dbxref=NCBI_GP:WJG79569.1;Name=WJG79569.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=PUW38_11730;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WJG79569.1;transl_table=11 CP118116.1 Genbank gene 2369864 2371054 . - . ID=gene-PUW38_11735;Name=PUW38_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11735 CP118116.1 Protein Homology CDS 2369864 2371054 . - 0 ID=cds-WJG79570.1;Parent=gene-PUW38_11735;Dbxref=NCBI_GP:WJG79570.1;Name=WJG79570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=PUW38_11735;product=MFS transporter;protein_id=WJG79570.1;transl_table=11 CP118116.1 Genbank gene 2371216 2372094 . + . ID=gene-PUW38_11740;Name=PUW38_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11740 CP118116.1 Protein Homology CDS 2371216 2372094 . + 0 ID=cds-WJG79571.1;Parent=gene-PUW38_11740;Dbxref=NCBI_GP:WJG79571.1;Name=WJG79571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=PUW38_11740;product=LysR substrate-binding domain-containing protein;protein_id=WJG79571.1;transl_table=11 CP118116.1 Genbank gene 2372210 2373280 . - . ID=gene-PUW38_11745;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=PUW38_11745 CP118116.1 Protein Homology CDS 2372210 2373280 . - 0 ID=cds-WJG79572.1;Parent=gene-PUW38_11745;Dbxref=NCBI_GP:WJG79572.1;Name=WJG79572.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=PUW38_11745;product=glycerophosphodiester phosphodiesterase;protein_id=WJG79572.1;transl_table=11 CP118116.1 Genbank gene 2373285 2374643 . - . ID=gene-PUW38_11750;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=PUW38_11750 CP118116.1 Protein Homology CDS 2373285 2374643 . - 0 ID=cds-WJG79573.1;Parent=gene-PUW38_11750;Dbxref=NCBI_GP:WJG79573.1;Name=WJG79573.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=PUW38_11750;product=glycerol-3-phosphate transporter;protein_id=WJG79573.1;transl_table=11 CP118116.1 Genbank gene 2374916 2376544 . + . ID=gene-PUW38_11755;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=PUW38_11755 CP118116.1 Protein Homology CDS 2374916 2376544 . + 0 ID=cds-WJG79574.1;Parent=gene-PUW38_11755;Dbxref=NCBI_GP:WJG79574.1;Name=WJG79574.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=PUW38_11755;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WJG79574.1;transl_table=11 CP118116.1 Genbank gene 2376534 2377793 . + . ID=gene-PUW38_11760;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=PUW38_11760 CP118116.1 Protein Homology CDS 2376534 2377793 . + 0 ID=cds-WJG79575.1;Parent=gene-PUW38_11760;Dbxref=NCBI_GP:WJG79575.1;Name=WJG79575.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=PUW38_11760;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WJG79575.1;transl_table=11 CP118116.1 Genbank gene 2377790 2378980 . + . ID=gene-PUW38_11765;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=PUW38_11765 CP118116.1 Protein Homology CDS 2377790 2378980 . + 0 ID=cds-WJG79576.1;Parent=gene-PUW38_11765;Dbxref=NCBI_GP:WJG79576.1;Name=WJG79576.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=PUW38_11765;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WJG79576.1;transl_table=11 CP118116.1 Genbank gene 2379406 2380428 . + . ID=gene-PUW38_11770;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=PUW38_11770 CP118116.1 Protein Homology CDS 2379406 2380428 . + 0 ID=cds-WJG79577.1;Parent=gene-PUW38_11770;Dbxref=NCBI_GP:WJG79577.1;Name=WJG79577.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=PUW38_11770;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WJG79577.1;transl_table=11 CP118116.1 Genbank gene 2380515 2380691 . - . ID=gene-PUW38_11775;Name=PUW38_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11775 CP118116.1 Protein Homology CDS 2380515 2380691 . - 0 ID=cds-WJG79578.1;Parent=gene-PUW38_11775;Dbxref=NCBI_GP:WJG79578.1;Name=WJG79578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=PUW38_11775;product=molybdopterin-binding protein;protein_id=WJG79578.1;transl_table=11 CP118116.1 Genbank gene 2380697 2381500 . - . ID=gene-PUW38_11780;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=PUW38_11780 CP118116.1 Protein Homology CDS 2380697 2381500 . - 0 ID=cds-WJG79579.1;Parent=gene-PUW38_11780;Dbxref=NCBI_GP:WJG79579.1;Name=WJG79579.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=PUW38_11780;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WJG79579.1;transl_table=11 CP118116.1 Genbank gene 2381526 2382815 . - . ID=gene-PUW38_11785;Name=PUW38_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11785 CP118116.1 Protein Homology CDS 2381526 2382815 . - 0 ID=cds-WJG79580.1;Parent=gene-PUW38_11785;Dbxref=NCBI_GP:WJG79580.1;Name=WJG79580.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=PUW38_11785;product=MFS transporter;protein_id=WJG79580.1;transl_table=11 CP118116.1 Genbank gene 2382871 2384076 . - . ID=gene-PUW38_11790;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=PUW38_11790 CP118116.1 Protein Homology CDS 2382871 2384076 . - 0 ID=cds-WJG79581.1;Parent=gene-PUW38_11790;Dbxref=NCBI_GP:WJG79581.1;Name=WJG79581.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=PUW38_11790;product=L-rhamnonate dehydratase;protein_id=WJG79581.1;transl_table=11 CP118116.1 Genbank gene 2384090 2384872 . - . ID=gene-PUW38_11795;Name=PUW38_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11795 CP118116.1 Protein Homology CDS 2384090 2384872 . - 0 ID=cds-WJG79582.1;Parent=gene-PUW38_11795;Dbxref=NCBI_GP:WJG79582.1;Name=WJG79582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=PUW38_11795;product=IclR family transcriptional regulator;protein_id=WJG79582.1;transl_table=11 CP118116.1 Genbank gene 2385122 2386318 . - . ID=gene-PUW38_11800;Name=PUW38_11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11800 CP118116.1 Protein Homology CDS 2385122 2386318 . - 0 ID=cds-WJG79583.1;Parent=gene-PUW38_11800;Dbxref=NCBI_GP:WJG79583.1;Name=WJG79583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=PUW38_11800;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WJG79583.1;transl_table=11 CP118116.1 Genbank gene 2386433 2386942 . - . ID=gene-PUW38_11805;Name=PUW38_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11805 CP118116.1 Protein Homology CDS 2386433 2386942 . - 0 ID=cds-WJG79584.1;Parent=gene-PUW38_11805;Dbxref=NCBI_GP:WJG79584.1;Name=WJG79584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739003.1;locus_tag=PUW38_11805;product=YfaZ family outer membrane protein;protein_id=WJG79584.1;transl_table=11 CP118116.1 Genbank gene 2387255 2387680 . + . ID=gene-PUW38_11810;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=PUW38_11810 CP118116.1 Protein Homology CDS 2387255 2387680 . + 0 ID=cds-WJG79585.1;Parent=gene-PUW38_11810;Dbxref=NCBI_GP:WJG79585.1;Name=WJG79585.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=PUW38_11810;product=nucleoside triphosphatase NudI;protein_id=WJG79585.1;transl_table=11 CP118116.1 Genbank gene 2387725 2388330 . - . ID=gene-PUW38_11815;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=PUW38_11815 CP118116.1 Protein Homology CDS 2387725 2388330 . - 0 ID=cds-WJG79586.1;Parent=gene-PUW38_11815;Dbxref=NCBI_GP:WJG79586.1;Name=WJG79586.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=PUW38_11815;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WJG79586.1;transl_table=11 CP118116.1 Genbank gene 2388629 2389768 . + . ID=gene-PUW38_11820;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=PUW38_11820 CP118116.1 Protein Homology CDS 2388629 2389768 . + 0 ID=cds-WJG83233.1;Parent=gene-PUW38_11820;Dbxref=NCBI_GP:WJG83233.1;Name=WJG83233.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=PUW38_11820;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WJG83233.1;transl_table=11 CP118116.1 Genbank gene 2389771 2390754 . + . ID=gene-PUW38_11825;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=PUW38_11825 CP118116.1 Protein Homology CDS 2389771 2390754 . + 0 ID=cds-WJG79587.1;Parent=gene-PUW38_11825;Dbxref=NCBI_GP:WJG79587.1;Name=WJG79587.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=PUW38_11825;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WJG79587.1;transl_table=11 CP118116.1 Genbank gene 2390751 2392733 . + . ID=gene-PUW38_11830;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=PUW38_11830 CP118116.1 Protein Homology CDS 2390751 2392733 . + 0 ID=cds-WJG79588.1;Parent=gene-PUW38_11830;Dbxref=NCBI_GP:WJG79588.1;Name=WJG79588.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=PUW38_11830;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WJG79588.1;transl_table=11 CP118116.1 Genbank gene 2392730 2393629 . + . ID=gene-PUW38_11835;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=PUW38_11835 CP118116.1 Protein Homology CDS 2392730 2393629 . + 0 ID=cds-WJG79589.1;Parent=gene-PUW38_11835;Dbxref=NCBI_GP:WJG79589.1;Name=WJG79589.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=PUW38_11835;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WJG79589.1;transl_table=11 CP118116.1 Genbank gene 2393626 2395272 . + . ID=gene-PUW38_11840;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=PUW38_11840 CP118116.1 Protein Homology CDS 2393626 2395272 . + 0 ID=cds-WJG79590.1;Parent=gene-PUW38_11840;Dbxref=NCBI_GP:WJG79590.1;Name=WJG79590.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=PUW38_11840;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WJG79590.1;transl_table=11 CP118116.1 Genbank gene 2395269 2395604 . + . ID=gene-PUW38_11845;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=PUW38_11845 CP118116.1 Protein Homology CDS 2395269 2395604 . + 0 ID=cds-WJG79591.1;Parent=gene-PUW38_11845;Dbxref=NCBI_GP:WJG79591.1;Name=WJG79591.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=PUW38_11845;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WJG79591.1;transl_table=11 CP118116.1 Genbank gene 2395604 2395981 . + . ID=gene-PUW38_11850;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=PUW38_11850 CP118116.1 Protein Homology CDS 2395604 2395981 . + 0 ID=cds-WJG79592.1;Parent=gene-PUW38_11850;Dbxref=NCBI_GP:WJG79592.1;Name=WJG79592.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=PUW38_11850;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WJG79592.1;transl_table=11 CP118116.1 Genbank gene 2395976 2396233 . - . ID=gene-PUW38_11855;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=PUW38_11855 CP118116.1 Protein Homology CDS 2395976 2396233 . - 0 ID=cds-WJG79593.1;Parent=gene-PUW38_11855;Dbxref=NCBI_GP:WJG79593.1;Name=WJG79593.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=PUW38_11855;product=signal transduction protein PmrD;protein_id=WJG79593.1;transl_table=11 CP118116.1 Genbank gene 2396331 2397698 . - . ID=gene-PUW38_11860;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=PUW38_11860 CP118116.1 Protein Homology CDS 2396331 2397698 . - 0 ID=cds-WJG79594.1;Parent=gene-PUW38_11860;Dbxref=NCBI_GP:WJG79594.1;Name=WJG79594.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=PUW38_11860;product=o-succinylbenzoate--CoA ligase;protein_id=WJG79594.1;transl_table=11 CP118116.1 Genbank gene 2397695 2398657 . - . ID=gene-PUW38_11865;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=PUW38_11865 CP118116.1 Protein Homology CDS 2397695 2398657 . - 0 ID=cds-WJG79595.1;Parent=gene-PUW38_11865;Dbxref=NCBI_GP:WJG79595.1;Name=WJG79595.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=PUW38_11865;product=o-succinylbenzoate synthase;protein_id=WJG79595.1;transl_table=11 CP118116.1 Genbank gene 2398657 2399514 . - . ID=gene-PUW38_11870;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=PUW38_11870 CP118116.1 Protein Homology CDS 2398657 2399514 . - 0 ID=cds-WJG79596.1;Parent=gene-PUW38_11870;Dbxref=NCBI_GP:WJG79596.1;Name=WJG79596.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=PUW38_11870;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WJG79596.1;transl_table=11 CP118116.1 Genbank gene 2399529 2400287 . - . ID=gene-PUW38_11875;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=PUW38_11875 CP118116.1 Protein Homology CDS 2399529 2400287 . - 0 ID=cds-WJG79597.1;Parent=gene-PUW38_11875;Dbxref=NCBI_GP:WJG79597.1;Name=WJG79597.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=PUW38_11875;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WJG79597.1;transl_table=11 CP118116.1 Genbank pseudogene 2400284 2401953 . - . ID=gene-PUW38_11880;Name=menD;gbkey=Gene;gene=menD;gene_biotype=pseudogene;locus_tag=PUW38_11880;pseudo=true CP118116.1 Protein Homology CDS 2400284 2401953 . - 0 ID=cds-PUW38_11880;Parent=gene-PUW38_11880;Note=frameshifted;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=PUW38_11880;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2402039 2403334 . - . ID=gene-PUW38_11885;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=PUW38_11885 CP118116.1 Protein Homology CDS 2402039 2403334 . - 0 ID=cds-WJG79598.1;Parent=gene-PUW38_11885;Dbxref=NCBI_GP:WJG79598.1;Name=WJG79598.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=PUW38_11885;product=isochorismate synthase MenF;protein_id=WJG79598.1;transl_table=11 CP118116.1 Genbank gene 2403434 2403739 . - . ID=gene-PUW38_11890;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=PUW38_11890 CP118116.1 Protein Homology CDS 2403434 2403739 . - 0 ID=cds-WJG79599.1;Parent=gene-PUW38_11890;Dbxref=NCBI_GP:WJG79599.1;Name=WJG79599.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=PUW38_11890;product=stress response protein ElaB;protein_id=WJG79599.1;transl_table=11 CP118116.1 Genbank gene 2403794 2404255 . - . ID=gene-PUW38_11895;Name=PUW38_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11895 CP118116.1 Protein Homology CDS 2403794 2404255 . - 0 ID=cds-WJG79600.1;Parent=gene-PUW38_11895;Dbxref=NCBI_GP:WJG79600.1;Name=WJG79600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=PUW38_11895;product=GNAT family N-acetyltransferase;protein_id=WJG79600.1;transl_table=11 CP118116.1 Genbank gene 2404316 2405233 . + . ID=gene-PUW38_11900;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=PUW38_11900 CP118116.1 Protein Homology CDS 2404316 2405233 . + 0 ID=cds-WJG79601.1;Parent=gene-PUW38_11900;Dbxref=NCBI_GP:WJG79601.1;Name=WJG79601.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rbn;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=PUW38_11900;product=ribonuclease BN;protein_id=WJG79601.1;transl_table=11 CP118116.1 Genbank gene 2405299 2406300 . + . ID=gene-PUW38_11905;Name=PUW38_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11905 CP118116.1 Protein Homology CDS 2405299 2406300 . + 0 ID=cds-WJG79602.1;Parent=gene-PUW38_11905;Dbxref=NCBI_GP:WJG79602.1;Name=WJG79602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=PUW38_11905;product=chemotaxis protein;protein_id=WJG79602.1;transl_table=11 CP118116.1 Genbank gene 2406341 2408131 . - . ID=gene-PUW38_11910;Name=PUW38_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11910 CP118116.1 Protein Homology CDS 2406341 2408131 . - 0 ID=cds-WJG79603.1;Parent=gene-PUW38_11910;Dbxref=NCBI_GP:WJG79603.1;Name=WJG79603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=PUW38_11910;product=VWA domain-containing protein;protein_id=WJG79603.1;transl_table=11 CP118116.1 Genbank gene 2408600 2408758 . + . ID=gene-PUW38_11915;Name=PUW38_11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11915 CP118116.1 Protein Homology CDS 2408600 2408758 . + 0 ID=cds-WJG83234.1;Parent=gene-PUW38_11915;Dbxref=NCBI_GP:WJG83234.1;Name=WJG83234.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020544.2;locus_tag=PUW38_11915;product=DUF1877 family protein;protein_id=WJG83234.1;transl_table=11 CP118116.1 Genbank gene 2409020 2410477 . - . ID=gene-PUW38_11920;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=PUW38_11920 CP118116.1 Protein Homology CDS 2409020 2410477 . - 0 ID=cds-WJG79604.1;Parent=gene-PUW38_11920;Dbxref=NCBI_GP:WJG79604.1;Name=WJG79604.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=PUW38_11920;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WJG79604.1;transl_table=11 CP118116.1 Genbank gene 2410484 2412013 . - . ID=gene-PUW38_11925;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=PUW38_11925 CP118116.1 Protein Homology CDS 2410484 2412013 . - 0 ID=cds-WJG79605.1;Parent=gene-PUW38_11925;Dbxref=NCBI_GP:WJG79605.1;Name=WJG79605.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=PUW38_11925;product=NADH-quinone oxidoreductase subunit M;protein_id=WJG79605.1;transl_table=11 CP118116.1 Genbank gene 2412327 2414168 . - . ID=gene-PUW38_11930;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=PUW38_11930 CP118116.1 Protein Homology CDS 2412327 2414168 . - 0 ID=cds-WJG79606.1;Parent=gene-PUW38_11930;Dbxref=NCBI_GP:WJG79606.1;Name=WJG79606.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=PUW38_11930;product=NADH-quinone oxidoreductase subunit L;protein_id=WJG79606.1;transl_table=11 CP118116.1 Genbank gene 2414165 2414467 . - . ID=gene-PUW38_11935;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=PUW38_11935 CP118116.1 Protein Homology CDS 2414165 2414467 . - 0 ID=cds-WJG79607.1;Parent=gene-PUW38_11935;Dbxref=NCBI_GP:WJG79607.1;Name=WJG79607.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=PUW38_11935;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WJG79607.1;transl_table=11 CP118116.1 Genbank gene 2414464 2415018 . - . ID=gene-PUW38_11940;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=PUW38_11940 CP118116.1 Protein Homology CDS 2414464 2415018 . - 0 ID=cds-WJG79608.1;Parent=gene-PUW38_11940;Dbxref=NCBI_GP:WJG79608.1;Name=WJG79608.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=PUW38_11940;product=NADH-quinone oxidoreductase subunit J;protein_id=WJG79608.1;transl_table=11 CP118116.1 Genbank gene 2415029 2415571 . - . ID=gene-PUW38_11945;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=PUW38_11945 CP118116.1 Protein Homology CDS 2415029 2415571 . - 0 ID=cds-WJG79609.1;Parent=gene-PUW38_11945;Dbxref=NCBI_GP:WJG79609.1;Name=WJG79609.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=PUW38_11945;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WJG79609.1;transl_table=11 CP118116.1 Genbank gene 2415586 2416563 . - . ID=gene-PUW38_11950;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=PUW38_11950 CP118116.1 Protein Homology CDS 2415586 2416563 . - 0 ID=cds-WJG79610.1;Parent=gene-PUW38_11950;Dbxref=NCBI_GP:WJG79610.1;Name=WJG79610.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=PUW38_11950;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WJG79610.1;transl_table=11 CP118116.1 Genbank gene 2416560 2419286 . - . ID=gene-PUW38_11955;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=PUW38_11955 CP118116.1 Protein Homology CDS 2416560 2419286 . - 0 ID=cds-WJG79611.1;Parent=gene-PUW38_11955;Dbxref=NCBI_GP:WJG79611.1;Name=WJG79611.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=PUW38_11955;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WJG79611.1;transl_table=11 CP118116.1 Genbank pseudogene 2419317 2420653 . - . ID=gene-PUW38_11960;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=pseudogene;locus_tag=PUW38_11960;pseudo=true CP118116.1 Protein Homology CDS 2419317 2420653 . - 0 ID=cds-PUW38_11960;Parent=gene-PUW38_11960;Note=frameshifted;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=PUW38_11960;product=NADH-quinone oxidoreductase subunit NuoF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2420650 2421150 . - . ID=gene-PUW38_11965;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=PUW38_11965 CP118116.1 Protein Homology CDS 2420650 2421150 . - 0 ID=cds-WJG79612.1;Parent=gene-PUW38_11965;Dbxref=NCBI_GP:WJG79612.1;Name=WJG79612.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=PUW38_11965;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WJG79612.1;transl_table=11 CP118116.1 Genbank gene 2421153 2422955 . - . ID=gene-PUW38_11970;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=PUW38_11970 CP118116.1 Protein Homology CDS 2421153 2422955 . - 0 ID=cds-WJG79613.1;Parent=gene-PUW38_11970;Dbxref=NCBI_GP:WJG79613.1;Name=WJG79613.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=PUW38_11970;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WJG79613.1;transl_table=11 CP118116.1 Genbank gene 2423042 2423704 . - . ID=gene-PUW38_11975;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=PUW38_11975 CP118116.1 Protein Homology CDS 2423042 2423704 . - 0 ID=cds-WJG79614.1;Parent=gene-PUW38_11975;Dbxref=NCBI_GP:WJG79614.1;Name=WJG79614.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=PUW38_11975;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WJG79614.1;transl_table=11 CP118116.1 Genbank gene 2423720 2424163 . - . ID=gene-PUW38_11980;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=PUW38_11980 CP118116.1 Protein Homology CDS 2423720 2424163 . - 0 ID=cds-WJG79615.1;Parent=gene-PUW38_11980;Dbxref=NCBI_GP:WJG79615.1;Name=WJG79615.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=PUW38_11980;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WJG79615.1;transl_table=11 CP118116.1 Genbank gene 2424557 2424709 . - . ID=gene-PUW38_11985;Name=PUW38_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_11985 CP118116.1 Protein Homology CDS 2424557 2424709 . - 0 ID=cds-WJG79616.1;Parent=gene-PUW38_11985;Dbxref=NCBI_GP:WJG79616.1;Name=WJG79616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=PUW38_11985;product=hypothetical protein;protein_id=WJG79616.1;transl_table=11 CP118116.1 Genbank gene 2424789 2425727 . - . ID=gene-PUW38_11990;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=PUW38_11990 CP118116.1 Protein Homology CDS 2424789 2425727 . - 0 ID=cds-WJG79617.1;Parent=gene-PUW38_11990;Dbxref=NCBI_GP:WJG79617.1;Name=WJG79617.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=PUW38_11990;product=transcriptional regulator LrhA;protein_id=WJG79617.1;transl_table=11 CP118116.1 Genbank gene 2426659 2427873 . + . ID=gene-PUW38_11995;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=PUW38_11995 CP118116.1 Protein Homology CDS 2426659 2427873 . + 0 ID=cds-WJG79618.1;Parent=gene-PUW38_11995;Dbxref=NCBI_GP:WJG79618.1;Name=WJG79618.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=PUW38_11995;product=alanine transaminase AlaA;protein_id=WJG79618.1;transl_table=11 CP118116.1 Genbank gene 2427967 2428566 . + . ID=gene-PUW38_12000;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=PUW38_12000 CP118116.1 Protein Homology CDS 2427967 2428566 . + 0 ID=cds-WJG79619.1;Parent=gene-PUW38_12000;Dbxref=NCBI_GP:WJG79619.1;Name=WJG79619.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=PUW38_12000;product=5'-deoxynucleotidase;protein_id=WJG79619.1;transl_table=11 CP118116.1 Genbank gene 2428672 2430498 . - . ID=gene-PUW38_12005;Name=PUW38_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12005 CP118116.1 Protein Homology CDS 2428672 2430498 . - 0 ID=cds-WJG79620.1;Parent=gene-PUW38_12005;Dbxref=NCBI_GP:WJG79620.1;Name=WJG79620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=PUW38_12005;product=SLC13 family permease;protein_id=WJG79620.1;transl_table=11 CP118116.1 Genbank gene 2430575 2431252 . - . ID=gene-PUW38_12010;Name=PUW38_12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12010 CP118116.1 Protein Homology CDS 2430575 2431252 . - 0 ID=cds-WJG83235.1;Parent=gene-PUW38_12010;Dbxref=NCBI_GP:WJG83235.1;Name=WJG83235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=PUW38_12010;product=sugar phosphatase;protein_id=WJG83235.1;transl_table=11 CP118116.1 Genbank gene 2431245 2431739 . - . ID=gene-PUW38_12015;Name=PUW38_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12015 CP118116.1 Protein Homology CDS 2431245 2431739 . - 0 ID=cds-WJG79621.1;Parent=gene-PUW38_12015;Dbxref=NCBI_GP:WJG79621.1;Name=WJG79621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=PUW38_12015;product=YfbU family protein;protein_id=WJG79621.1;transl_table=11 CP118116.1 Genbank pseudogene 2431822 2432276 . - . ID=gene-PUW38_12020;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=pseudogene;locus_tag=PUW38_12020;pseudo=true CP118116.1 Protein Homology CDS 2431822 2432276 . - 0 ID=cds-PUW38_12020;Parent=gene-PUW38_12020;Note=frameshifted;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=PUW38_12020;product=terminus macrodomain insulation protein YfbV;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2432615 2433817 . + . ID=gene-PUW38_12025;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=PUW38_12025 CP118116.1 Protein Homology CDS 2432615 2433817 . + 0 ID=cds-WJG79622.1;Parent=gene-PUW38_12025;Dbxref=NCBI_GP:WJG79622.1;Name=WJG79622.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=PUW38_12025;product=acetate kinase;protein_id=WJG79622.1;transl_table=11 CP118116.1 Genbank gene 2433894 2436038 . + . ID=gene-PUW38_12030;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PUW38_12030 CP118116.1 Protein Homology CDS 2433894 2436038 . + 0 ID=cds-WJG79623.1;Parent=gene-PUW38_12030;Dbxref=NCBI_GP:WJG79623.1;Name=WJG79623.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=PUW38_12030;product=phosphate acetyltransferase;protein_id=WJG79623.1;transl_table=11 CP118116.1 Genbank gene 2436256 2437776 . + . ID=gene-PUW38_12035;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=PUW38_12035 CP118116.1 Protein Homology CDS 2436256 2437776 . + 0 ID=cds-WJG79624.1;Parent=gene-PUW38_12035;Dbxref=NCBI_GP:WJG79624.1;Name=WJG79624.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=PUW38_12035;product=putative basic amino acid antiporter YfcC;protein_id=WJG79624.1;transl_table=11 CP118116.1 Genbank gene 2437825 2438778 . - . ID=gene-PUW38_12040;Name=PUW38_12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12040 CP118116.1 Protein Homology CDS 2437825 2438778 . - 0 ID=cds-WJG79625.1;Parent=gene-PUW38_12040;Dbxref=NCBI_GP:WJG79625.1;Name=WJG79625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=PUW38_12040;product=transketolase family protein;protein_id=WJG79625.1;transl_table=11 CP118116.1 Genbank gene 2438771 2439601 . - . ID=gene-PUW38_12045;Name=PUW38_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12045 CP118116.1 Protein Homology CDS 2438771 2439601 . - 0 ID=cds-WJG79626.1;Parent=gene-PUW38_12045;Dbxref=NCBI_GP:WJG79626.1;Name=WJG79626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=PUW38_12045;product=transketolase;protein_id=WJG79626.1;transl_table=11 CP118116.1 Genbank gene 2439598 2440989 . - . ID=gene-PUW38_12050;Name=PUW38_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12050 CP118116.1 Protein Homology CDS 2439598 2440989 . - 0 ID=cds-WJG79627.1;Parent=gene-PUW38_12050;Dbxref=NCBI_GP:WJG79627.1;Name=WJG79627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=PUW38_12050;product=PTS ascorbate transporter subunit IIC;protein_id=WJG79627.1;transl_table=11 CP118116.1 Genbank gene 2441010 2441282 . - . ID=gene-PUW38_12055;Name=PUW38_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12055 CP118116.1 Protein Homology CDS 2441010 2441282 . - 0 ID=cds-WJG79628.1;Parent=gene-PUW38_12055;Dbxref=NCBI_GP:WJG79628.1;Name=WJG79628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=PUW38_12055;product=PTS sugar transporter subunit IIB;protein_id=WJG79628.1;transl_table=11 CP118116.1 Genbank gene 2441363 2441806 . - . ID=gene-PUW38_12060;Name=PUW38_12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12060 CP118116.1 Protein Homology CDS 2441363 2441806 . - 0 ID=cds-WJG79629.1;Parent=gene-PUW38_12060;Dbxref=NCBI_GP:WJG79629.1;Name=WJG79629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=PUW38_12060;product=PTS sugar transporter subunit IIA;protein_id=WJG79629.1;transl_table=11 CP118116.1 Genbank gene 2442059 2443078 . + . ID=gene-PUW38_12065;Name=PUW38_12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12065 CP118116.1 Protein Homology CDS 2442059 2443078 . + 0 ID=cds-WJG79630.1;Parent=gene-PUW38_12065;Dbxref=NCBI_GP:WJG79630.1;Name=WJG79630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=PUW38_12065;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG79630.1;transl_table=11 CP118116.1 Genbank gene 2443084 2443638 . - . ID=gene-PUW38_12070;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=PUW38_12070 CP118116.1 Protein Homology CDS 2443084 2443638 . - 0 ID=cds-WJG79631.1;Parent=gene-PUW38_12070;Dbxref=NCBI_GP:WJG79631.1;Name=WJG79631.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=PUW38_12070;product=NUDIX hydrolase YfcD;protein_id=WJG79631.1;transl_table=11 CP118116.1 Genbank gene 2443695 2444246 . - . ID=gene-PUW38_12075;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=PUW38_12075 CP118116.1 Protein Homology CDS 2443695 2444246 . - 0 ID=cds-WJG79632.1;Parent=gene-PUW38_12075;Dbxref=NCBI_GP:WJG79632.1;Name=WJG79632.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=PUW38_12075;product=phosphodiesterase;protein_id=WJG79632.1;transl_table=11 CP118116.1 Genbank gene 2444302 2444946 . - . ID=gene-PUW38_12080;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=PUW38_12080 CP118116.1 Protein Homology CDS 2444302 2444946 . - 0 ID=cds-WJG79633.1;Parent=gene-PUW38_12080;Dbxref=NCBI_GP:WJG79633.1;Name=WJG79633.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=PUW38_12080;product=glutathione transferase;protein_id=WJG79633.1;transl_table=11 CP118116.1 Genbank gene 2445089 2445736 . + . ID=gene-PUW38_12085;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=PUW38_12085 CP118116.1 Protein Homology CDS 2445089 2445736 . + 0 ID=cds-WJG79634.1;Parent=gene-PUW38_12085;Dbxref=NCBI_GP:WJG79634.1;Name=WJG79634.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=PUW38_12085;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WJG79634.1;transl_table=11 CP118116.1 Genbank gene 2445862 2446755 . + . ID=gene-PUW38_12090;Name=PUW38_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12090 CP118116.1 Protein Homology CDS 2445862 2446755 . + 0 ID=cds-WJG79635.1;Parent=gene-PUW38_12090;Dbxref=NCBI_GP:WJG79635.1;Name=WJG79635.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=PUW38_12090;product=TIGR01777 family oxidoreductase;protein_id=WJG79635.1;transl_table=11 CP118116.1 Genbank gene 2446807 2447580 . - . ID=gene-PUW38_12095;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=PUW38_12095 CP118116.1 Protein Homology CDS 2446807 2447580 . - 0 ID=cds-WJG83236.1;Parent=gene-PUW38_12095;Dbxref=NCBI_GP:WJG83236.1;Name=WJG83236.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=PUW38_12095;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WJG83236.1;transl_table=11 CP118116.1 Genbank pseudogene 2447594 2448300 . - . ID=gene-PUW38_12100;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=pseudogene;locus_tag=PUW38_12100;pseudo=true CP118116.1 Protein Homology CDS 2447594 2448300 . - 0 ID=cds-PUW38_12100;Parent=gene-PUW38_12100;Note=frameshifted;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=PUW38_12100;product=histidine ABC transporter permease HisM;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2448297 2448983 . - . ID=gene-PUW38_12105;Name=PUW38_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12105 CP118116.1 Protein Homology CDS 2448297 2448983 . - 0 ID=cds-WJG79636.1;Parent=gene-PUW38_12105;Dbxref=NCBI_GP:WJG79636.1;Name=WJG79636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=PUW38_12105;product=histidine ABC transporter permease HisQ;protein_id=WJG79636.1;transl_table=11 CP118116.1 Genbank gene 2449166 2449948 . - . ID=gene-PUW38_12110;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=PUW38_12110 CP118116.1 Protein Homology CDS 2449166 2449948 . - 0 ID=cds-WJG79637.1;Parent=gene-PUW38_12110;Dbxref=NCBI_GP:WJG79637.1;Name=WJG79637.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=PUW38_12110;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WJG79637.1;transl_table=11 CP118116.1 Genbank gene 2450186 2450968 . - . ID=gene-PUW38_12115;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=PUW38_12115 CP118116.1 Protein Homology CDS 2450186 2450968 . - 0 ID=cds-WJG79638.1;Parent=gene-PUW38_12115;Dbxref=NCBI_GP:WJG79638.1;Name=WJG79638.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=PUW38_12115;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WJG79638.1;transl_table=11 CP118116.1 Genbank gene 2451257 2451826 . - . ID=gene-PUW38_12120;Name=PUW38_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12120 CP118116.1 Protein Homology CDS 2451257 2451826 . - 0 ID=cds-WJG79639.1;Parent=gene-PUW38_12120;Dbxref=NCBI_GP:WJG79639.1;Name=WJG79639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=PUW38_12120;product=UbiX family flavin prenyltransferase;protein_id=WJG79639.1;transl_table=11 CP118116.1 Genbank gene 2451853 2453259 . - . ID=gene-PUW38_12125;Name=PUW38_12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12125 CP118116.1 Protein Homology CDS 2451853 2453259 . - 0 ID=cds-WJG79640.1;Parent=gene-PUW38_12125;Dbxref=NCBI_GP:WJG79640.1;Name=WJG79640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=PUW38_12125;product=amino acid permease;protein_id=WJG79640.1;transl_table=11 CP118116.1 Genbank gene 2453323 2454426 . - . ID=gene-PUW38_12130;Name=PUW38_12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12130 CP118116.1 Protein Homology CDS 2453323 2454426 . - 0 ID=cds-WJG79641.1;Parent=gene-PUW38_12130;Dbxref=NCBI_GP:WJG79641.1;Name=WJG79641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=PUW38_12130;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WJG79641.1;transl_table=11 CP118116.1 Genbank pseudogene 2454428 2455849 . - . ID=gene-PUW38_12135;Name=PUW38_12135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12135;pseudo=true CP118116.1 Protein Homology CDS 2454428 2455849 . - 0 ID=cds-PUW38_12135;Parent=gene-PUW38_12135;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=PUW38_12135;product=APC family permease;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2455940 2457337 . - . ID=gene-PUW38_12140;Name=PUW38_12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12140 CP118116.1 Protein Homology CDS 2455940 2457337 . - 0 ID=cds-WJG79642.1;Parent=gene-PUW38_12140;Dbxref=NCBI_GP:WJG79642.1;Name=WJG79642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=PUW38_12140;product=alanine racemase;protein_id=WJG79642.1;transl_table=11 CP118116.1 Genbank pseudogene 2457548 2458974 . + . ID=gene-PUW38_12145;Name=PUW38_12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12145;pseudo=true CP118116.1 Protein Homology CDS 2457548 2458974 . + 0 ID=cds-PUW38_12145;Parent=gene-PUW38_12145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=PUW38_12145;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2459010 2460527 . - . ID=gene-PUW38_12150;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=PUW38_12150 CP118116.1 Protein Homology CDS 2459010 2460527 . - 0 ID=cds-WJG79643.1;Parent=gene-PUW38_12150;Dbxref=NCBI_GP:WJG79643.1;Name=WJG79643.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=PUW38_12150;product=amidophosphoribosyltransferase;protein_id=WJG79643.1;transl_table=11 CP118116.1 Genbank gene 2460565 2461053 . - . ID=gene-PUW38_12155;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=PUW38_12155 CP118116.1 Protein Homology CDS 2460565 2461053 . - 0 ID=cds-WJG79644.1;Parent=gene-PUW38_12155;Dbxref=NCBI_GP:WJG79644.1;Name=WJG79644.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=PUW38_12155;product=colicin V production protein;protein_id=WJG79644.1;transl_table=11 CP118116.1 Genbank gene 2461364 2462038 . - . ID=gene-PUW38_12160;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=PUW38_12160 CP118116.1 Protein Homology CDS 2461364 2462038 . - 0 ID=cds-WJG79645.1;Parent=gene-PUW38_12160;Dbxref=NCBI_GP:WJG79645.1;Name=WJG79645.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=PUW38_12160;product=cell division protein DedD;protein_id=WJG79645.1;transl_table=11 CP118116.1 Genbank pseudogene 2462028 2463294 . - . ID=gene-PUW38_12165;Name=folC;gbkey=Gene;gene=folC;gene_biotype=pseudogene;locus_tag=PUW38_12165;pseudo=true CP118116.1 Protein Homology CDS 2462028 2463294 . - 0 ID=cds-PUW38_12165;Parent=gene-PUW38_12165;Note=frameshifted;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=PUW38_12165;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2463362 2464275 . - . ID=gene-PUW38_12170;Name=accD;gbkey=Gene;gene=accD;gene_biotype=pseudogene;locus_tag=PUW38_12170;pseudo=true CP118116.1 Protein Homology CDS 2463362 2464275 . - 0 ID=cds-PUW38_12170;Parent=gene-PUW38_12170;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=PUW38_12170;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2464425 2465084 . - . ID=gene-PUW38_12175;Name=PUW38_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12175 CP118116.1 Protein Homology CDS 2464425 2465084 . - 0 ID=cds-WJG79646.1;Parent=gene-PUW38_12175;Dbxref=NCBI_GP:WJG79646.1;Name=WJG79646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=PUW38_12175;product=DedA family protein;protein_id=WJG79646.1;transl_table=11 CP118116.1 Genbank gene 2465133 2465945 . - . ID=gene-PUW38_12180;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=PUW38_12180 CP118116.1 Protein Homology CDS 2465133 2465945 . - 0 ID=cds-WJG79647.1;Parent=gene-PUW38_12180;Dbxref=NCBI_GP:WJG79647.1;Name=WJG79647.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=PUW38_12180;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WJG79647.1;transl_table=11 CP118116.1 Genbank gene 2465945 2466958 . - . ID=gene-PUW38_12185;Name=PUW38_12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12185 CP118116.1 Protein Homology CDS 2465945 2466958 . - 0 ID=cds-WJG79648.1;Parent=gene-PUW38_12185;Dbxref=NCBI_GP:WJG79648.1;Name=WJG79648.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=PUW38_12185;product=aspartate-semialdehyde dehydrogenase;protein_id=WJG79648.1;transl_table=11 CP118116.1 Genbank gene 2467026 2468162 . - . ID=gene-PUW38_12190;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=PUW38_12190 CP118116.1 Protein Homology CDS 2467026 2468162 . - 0 ID=cds-WJG79649.1;Parent=gene-PUW38_12190;Dbxref=NCBI_GP:WJG79649.1;Name=WJG79649.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=PUW38_12190;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WJG79649.1;transl_table=11 CP118116.1 Genbank pseudogene 2468266 2469266 . + . ID=gene-PUW38_12195;Name=flk;gbkey=Gene;gene=flk;gene_biotype=pseudogene;locus_tag=PUW38_12195;pseudo=true CP118116.1 Protein Homology CDS 2468266 2469266 . + 0 ID=cds-PUW38_12195;Parent=gene-PUW38_12195;Note=frameshifted;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=PUW38_12195;product=flagella biosynthesis regulator Flk;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2469263 2470441 . - . ID=gene-PUW38_12200;Name=PUW38_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12200 CP118116.1 Protein Homology CDS 2469263 2470441 . - 0 ID=cds-WJG79650.1;Parent=gene-PUW38_12200;Dbxref=NCBI_GP:WJG79650.1;Name=WJG79650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=PUW38_12200;product=MFS transporter;protein_id=WJG79650.1;transl_table=11 CP118116.1 Genbank gene 2470621 2470995 . - . ID=gene-PUW38_12205;Name=PUW38_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12205 CP118116.1 Protein Homology CDS 2470621 2470995 . - 0 ID=cds-WJG79651.1;Parent=gene-PUW38_12205;Dbxref=NCBI_GP:WJG79651.1;Name=WJG79651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=PUW38_12205;product=hypothetical protein;protein_id=WJG79651.1;transl_table=11 CP118116.1 Genbank pseudogene 2471168 2471415 . + . ID=gene-PUW38_12210;Name=PUW38_12210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12210;pseudo=true CP118116.1 Protein Homology CDS 2471168 2471415 . + 0 ID=cds-PUW38_12210;Parent=gene-PUW38_12210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=PUW38_12210;product=transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2471584 2471952 . + . ID=gene-PUW38_12215;Name=PUW38_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12215 CP118116.1 Protein Homology CDS 2471584 2471952 . + 0 ID=cds-WJG79652.1;Parent=gene-PUW38_12215;Dbxref=NCBI_GP:WJG79652.1;Name=WJG79652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=PUW38_12215;product=NlpC/P60 family protein;protein_id=WJG79652.1;transl_table=11 CP118116.1 Genbank gene 2471952 2472470 . + . ID=gene-PUW38_12220;Name=PUW38_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12220 CP118116.1 Protein Homology CDS 2471952 2472470 . + 0 ID=cds-WJG79653.1;Parent=gene-PUW38_12220;Dbxref=NCBI_GP:WJG79653.1;Name=WJG79653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=PUW38_12220;product=YbjP/YqhG family protein;protein_id=WJG79653.1;transl_table=11 CP118116.1 Genbank gene 2472537 2473193 . - . ID=gene-PUW38_12225;Name=PUW38_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12225 CP118116.1 Protein Homology CDS 2472537 2473193 . - 0 ID=cds-WJG79654.1;Parent=gene-PUW38_12225;Dbxref=NCBI_GP:WJG79654.1;Name=WJG79654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=PUW38_12225;product=type II CAAX endopeptidase family protein;protein_id=WJG79654.1;transl_table=11 CP118116.1 Genbank gene 2473291 2474505 . - . ID=gene-PUW38_12230;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=PUW38_12230 CP118116.1 Protein Homology CDS 2473291 2474505 . - 0 ID=cds-WJG79655.1;Parent=gene-PUW38_12230;Dbxref=NCBI_GP:WJG79655.1;Name=WJG79655.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=PUW38_12230;product=beta-ketoacyl-ACP synthase I;protein_id=WJG79655.1;transl_table=11 CP118116.1 Genbank gene 2474665 2476665 . + . ID=gene-PUW38_12235;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=PUW38_12235 CP118116.1 Protein Homology CDS 2474665 2476665 . + 0 ID=cds-WJG79656.1;Parent=gene-PUW38_12235;Dbxref=NCBI_GP:WJG79656.1;Name=WJG79656.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=PUW38_12235;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WJG79656.1;transl_table=11 CP118116.1 Genbank gene 2476717 2476992 . - . ID=gene-PUW38_12240;Name=PUW38_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12240 CP118116.1 Protein Homology CDS 2476717 2476992 . - 0 ID=cds-WJG79657.1;Parent=gene-PUW38_12240;Dbxref=NCBI_GP:WJG79657.1;Name=WJG79657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=PUW38_12240;product=YfcL family protein;protein_id=WJG79657.1;transl_table=11 CP118116.1 Genbank gene 2477025 2477573 . - . ID=gene-PUW38_12245;Name=PUW38_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12245 CP118116.1 Protein Homology CDS 2477025 2477573 . - 0 ID=cds-WJG79658.1;Parent=gene-PUW38_12245;Dbxref=NCBI_GP:WJG79658.1;Name=WJG79658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=PUW38_12245;product=elongation factor P hydroxylase;protein_id=WJG79658.1;transl_table=11 CP118116.1 Genbank gene 2477573 2478382 . - . ID=gene-PUW38_12250;Name=PUW38_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12250 CP118116.1 Protein Homology CDS 2477573 2478382 . - 0 ID=cds-WJG79659.1;Parent=gene-PUW38_12250;Dbxref=NCBI_GP:WJG79659.1;Name=WJG79659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=PUW38_12250;product=sulfite exporter TauE/SafE family protein;protein_id=WJG79659.1;transl_table=11 CP118116.1 Genbank pseudogene 2478382 2479205 . - . ID=gene-PUW38_12255;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=pseudogene;locus_tag=PUW38_12255;pseudo=true CP118116.1 Protein Homology CDS 2478382 2479205 . - 0 ID=cds-PUW38_12255;Parent=gene-PUW38_12255;Note=frameshifted;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=PUW38_12255;product=penicillin-insensitive murein endopeptidase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2479209 2480294 . - . ID=gene-PUW38_12260;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=PUW38_12260 CP118116.1 Protein Homology CDS 2479209 2480294 . - 0 ID=cds-WJG79660.1;Parent=gene-PUW38_12260;Dbxref=NCBI_GP:WJG79660.1;Name=WJG79660.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=PUW38_12260;product=chorismate synthase;protein_id=WJG79660.1;transl_table=11 CP118116.1 Genbank gene 2480330 2481262 . - . ID=gene-PUW38_12265;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=PUW38_12265 CP118116.1 Protein Homology CDS 2480330 2481262 . - 0 ID=cds-WJG79661.1;Parent=gene-PUW38_12265;Dbxref=NCBI_GP:WJG79661.1;Name=WJG79661.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=PUW38_12265;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WJG79661.1;transl_table=11 CP118116.1 Genbank gene 2481428 2481979 . + . ID=gene-PUW38_12270;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=PUW38_12270 CP118116.1 Protein Homology CDS 2481428 2481979 . + 0 ID=cds-WJG79662.1;Parent=gene-PUW38_12270;Dbxref=NCBI_GP:WJG79662.1;Name=WJG79662.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=PUW38_12270;product=endonuclease SmrB;protein_id=WJG79662.1;transl_table=11 CP118116.1 Genbank gene 2482079 2482564 . - . ID=gene-PUW38_12275;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=PUW38_12275 CP118116.1 Protein Homology CDS 2482079 2482564 . - 0 ID=cds-WJG79663.1;Parent=gene-PUW38_12275;Dbxref=NCBI_GP:WJG79663.1;Name=WJG79663.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=PUW38_12275;product=phosphohistidine phosphatase SixA;protein_id=WJG79663.1;transl_table=11 CP118116.1 Genbank pseudogene 2482773 2484918 . - . ID=gene-PUW38_12280;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=pseudogene;locus_tag=PUW38_12280;pseudo=true CP118116.1 Protein Homology CDS 2482773 2484918 . - 0 ID=cds-PUW38_12280;Parent=gene-PUW38_12280;Note=frameshifted;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=PUW38_12280;product=fatty acid oxidation complex subunit alpha FadJ;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2484918 2486229 . - . ID=gene-PUW38_12285;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=pseudogene;locus_tag=PUW38_12285;pseudo=true CP118116.1 Protein Homology CDS 2484918 2486229 . - 0 ID=cds-PUW38_12285;Parent=gene-PUW38_12285;Note=frameshifted;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=PUW38_12285;product=acetyl-CoA C-acyltransferase FadI;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2486406 2486690 . - . ID=gene-PUW38_12290;Name=PUW38_12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12290 CP118116.1 Protein Homology CDS 2486406 2486690 . - 0 ID=cds-WJG79664.1;Parent=gene-PUW38_12290;Dbxref=NCBI_GP:WJG79664.1;Name=WJG79664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=PUW38_12290;product=YfcZ/YiiS family protein;protein_id=WJG79664.1;transl_table=11 CP118116.1 Genbank gene 2487061 2488368 . + . ID=gene-PUW38_12295;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=PUW38_12295 CP118116.1 Protein Homology CDS 2487061 2488368 . + 0 ID=cds-WJG79665.1;Parent=gene-PUW38_12295;Dbxref=NCBI_GP:WJG79665.1;Name=WJG79665.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=PUW38_12295;product=long-chain fatty acid transporter FadL;protein_id=WJG79665.1;transl_table=11 CP118116.1 Genbank gene 2488429 2489184 . - . ID=gene-PUW38_12300;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=PUW38_12300 CP118116.1 Protein Homology CDS 2488429 2489184 . - 0 ID=cds-WJG79666.1;Parent=gene-PUW38_12300;Dbxref=NCBI_GP:WJG79666.1;Name=WJG79666.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=PUW38_12300;product=phospholipid-binding lipoprotein MlaA;protein_id=WJG79666.1;transl_table=11 CP118116.1 Genbank gene 2489473 2490414 . + . ID=gene-PUW38_12305;Name=PUW38_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12305 CP118116.1 Protein Homology CDS 2489473 2490414 . + 0 ID=cds-WJG79667.1;Parent=gene-PUW38_12305;Dbxref=NCBI_GP:WJG79667.1;Name=WJG79667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=PUW38_12305;product=formate/nitrite transporter family protein;protein_id=WJG79667.1;transl_table=11 CP118116.1 Genbank gene 2490490 2490564 . + . ID=gene-PUW38_12310;Name=PUW38_12310;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_12310 CP118116.1 tRNAscan-SE tRNA 2490490 2490564 . + . ID=rna-PUW38_12310;Parent=gene-PUW38_12310;anticodon=(pos:2490523..2490525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12310;product=tRNA-Arg CP118116.1 tRNAscan-SE exon 2490490 2490564 . + . ID=exon-PUW38_12310-1;Parent=rna-PUW38_12310;anticodon=(pos:2490523..2490525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12310;product=tRNA-Arg CP118116.1 Genbank pseudogene 2490712 2491336 . - . ID=gene-PUW38_12315;Name=PUW38_12315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12315;pseudo=true CP118116.1 Protein Homology CDS 2490712 2491336 . - 0 ID=cds-PUW38_12315;Parent=gene-PUW38_12315;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=PUW38_12315;product=transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2491657 2492046 . + . ID=gene-PUW38_12320;Name=PUW38_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12320 CP118116.1 Protein Homology CDS 2491657 2492046 . + 0 ID=cds-WJG79668.1;Parent=gene-PUW38_12320;Dbxref=NCBI_GP:WJG79668.1;Name=WJG79668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696807.1;locus_tag=PUW38_12320;product=GtrA family protein;protein_id=WJG79668.1;transl_table=11 CP118116.1 Genbank pseudogene 2492015 2492233 . + . ID=gene-PUW38_12325;Name=PUW38_12325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12325;pseudo=true CP118116.1 Protein Homology CDS 2492015 2492233 . + 0 ID=cds-PUW38_12325;Parent=gene-PUW38_12325;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=PUW38_12325;product=glycosyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2492287 2494209 . + . ID=gene-PUW38_12330;Name=PUW38_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12330 CP118116.1 Protein Homology CDS 2492287 2494209 . + 0 ID=cds-WJG79669.1;Parent=gene-PUW38_12330;Dbxref=NCBI_GP:WJG79669.1;Name=WJG79669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400614.1;locus_tag=PUW38_12330;product=acyltransferase family protein;protein_id=WJG79669.1;transl_table=11 CP118116.1 Genbank pseudogene 2494380 2494826 . - . ID=gene-PUW38_12335;Name=PUW38_12335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12335;pseudo=true CP118116.1 Protein Homology CDS 2494380 2494826 . - 0 ID=cds-PUW38_12335;Parent=gene-PUW38_12335;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=PUW38_12335;product=transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2495199 2495306 . - . ID=gene-PUW38_12340;Name=PUW38_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12340 CP118116.1 Protein Homology CDS 2495199 2495306 . - 0 ID=cds-WJG79670.1;Parent=gene-PUW38_12340;Dbxref=NCBI_GP:WJG79670.1;Name=WJG79670.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020812.2;locus_tag=PUW38_12340;product=hypothetical protein;protein_id=WJG79670.1;transl_table=11 CP118116.1 Genbank gene 2495281 2495523 . - . ID=gene-PUW38_12345;Name=PUW38_12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12345 CP118116.1 Protein Homology CDS 2495281 2495523 . - 0 ID=cds-WJG79671.1;Parent=gene-PUW38_12345;Dbxref=NCBI_GP:WJG79671.1;Name=WJG79671.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020812.2;locus_tag=PUW38_12345;product=tail spike protein;protein_id=WJG79671.1;transl_table=11 CP118116.1 Genbank pseudogene 2495718 2496655 . - . ID=gene-PUW38_12350;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=pseudogene;locus_tag=PUW38_12350;pseudo=true CP118116.1 Protein Homology CDS 2495718 2496655 . - 0 ID=cds-PUW38_12350;Parent=gene-PUW38_12350;Note=frameshifted;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=PUW38_12350;product=omptin family outer membrane protease PgtE;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2496923 2498170 . - . ID=gene-PUW38_12355;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=PUW38_12355 CP118116.1 Protein Homology CDS 2496923 2498170 . - 0 ID=cds-WJG83237.1;Parent=gene-PUW38_12355;Dbxref=NCBI_GP:WJG83237.1;Name=WJG83237.1;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=PUW38_12355;product=two-component system response regulator PgtA;protein_id=WJG83237.1;transl_table=11 CP118116.1 Genbank gene 2498160 2500166 . - . ID=gene-PUW38_12360;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=PUW38_12360 CP118116.1 Protein Homology CDS 2498160 2500166 . - 0 ID=cds-WJG79672.1;Parent=gene-PUW38_12360;Dbxref=NCBI_GP:WJG79672.1;Name=WJG79672.1;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=PUW38_12360;product=two-component system sensor histidine kinase PgtB;protein_id=WJG79672.1;transl_table=11 CP118116.1 Genbank gene 2500163 2501356 . - . ID=gene-PUW38_12365;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=PUW38_12365 CP118116.1 Protein Homology CDS 2500163 2501356 . - 0 ID=cds-WJG83238.1;Parent=gene-PUW38_12365;Dbxref=NCBI_GP:WJG83238.1;Name=WJG83238.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=PUW38_12365;product=phosphoglycerate transport regulator PgtC;protein_id=WJG83238.1;transl_table=11 CP118116.1 Genbank pseudogene 2501792 2503181 . + . ID=gene-PUW38_12370;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=pseudogene;locus_tag=PUW38_12370;pseudo=true CP118116.1 Protein Homology CDS 2501792 2503181 . + 0 ID=cds-PUW38_12370;Parent=gene-PUW38_12370;Note=frameshifted;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=PUW38_12370;product=phosphoglycerate transporter PgtP;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2503455 2503697 . - . ID=gene-PUW38_12375;Name=PUW38_12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12375 CP118116.1 Protein Homology CDS 2503455 2503697 . - 0 ID=cds-WJG79673.1;Parent=gene-PUW38_12375;Dbxref=NCBI_GP:WJG79673.1;Name=WJG79673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=PUW38_12375;product=YfdY family protein;protein_id=WJG79673.1;transl_table=11 CP118116.1 Genbank gene 2504219 2505139 . + . ID=gene-PUW38_12380;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=PUW38_12380 CP118116.1 Protein Homology CDS 2504219 2505139 . + 0 ID=cds-WJG79674.1;Parent=gene-PUW38_12380;Dbxref=NCBI_GP:WJG79674.1;Name=WJG79674.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=PUW38_12380;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WJG79674.1;transl_table=11 CP118116.1 Genbank gene 2505542 2505613 . + . ID=gene-PUW38_12385;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=PUW38_12385 CP118116.1 Protein Homology CDS 2505542 2505613 . + 0 ID=cds-WJG83239.1;Parent=gene-PUW38_12385;Dbxref=NCBI_GP:WJG83239.1;Name=WJG83239.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=PUW38_12385;product=membrane protein YpdK;protein_id=WJG83239.1;transl_table=11 CP118116.1 Genbank gene 2505663 2506901 . - . ID=gene-PUW38_12390;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=PUW38_12390 CP118116.1 Protein Homology CDS 2505663 2506901 . - 0 ID=cds-WJG79675.1;Parent=gene-PUW38_12390;Dbxref=NCBI_GP:WJG79675.1;Name=WJG79675.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=PUW38_12390;product=alanine transaminase;protein_id=WJG79675.1;transl_table=11 CP118116.1 Genbank pseudogene 2507624 2508588 . - . ID=gene-PUW38_12395;Name=glk;gbkey=Gene;gene=glk;gene_biotype=pseudogene;locus_tag=PUW38_12395;pseudo=true CP118116.1 Protein Homology CDS 2507624 2508588 . - 0 ID=cds-PUW38_12395;Parent=gene-PUW38_12395;Note=frameshifted;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=PUW38_12395;product=glucokinase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2508792 2510032 . + . ID=gene-PUW38_12400;Name=PUW38_12400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12400;pseudo=true CP118116.1 Protein Homology CDS 2508792 2510032 . + 0 ID=cds-PUW38_12400;Parent=gene-PUW38_12400;Note=frameshifted;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=PUW38_12400;product=ion channel protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2510052 2511704 . - . ID=gene-PUW38_12405;Name=PUW38_12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12405 CP118116.1 Protein Homology CDS 2510052 2511704 . - 0 ID=cds-WJG79676.1;Parent=gene-PUW38_12405;Dbxref=NCBI_GP:WJG79676.1;Name=WJG79676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=PUW38_12405;product=alpha-keto acid decarboxylase family protein;protein_id=WJG79676.1;transl_table=11 CP118116.1 Genbank gene 2511884 2512882 . + . ID=gene-PUW38_12410;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=PUW38_12410 CP118116.1 Protein Homology CDS 2511884 2512882 . + 0 ID=cds-WJG79677.1;Parent=gene-PUW38_12410;Dbxref=NCBI_GP:WJG79677.1;Name=WJG79677.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=PUW38_12410;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WJG79677.1;transl_table=11 CP118116.1 Genbank gene 2512996 2513322 . + . ID=gene-PUW38_12415;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=PUW38_12415 CP118116.1 Protein Homology CDS 2512996 2513322 . + 0 ID=cds-WJG79678.1;Parent=gene-PUW38_12415;Dbxref=NCBI_GP:WJG79678.1;Name=WJG79678.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=PUW38_12415;product=DUF2502 domain-containing protein YpeC;protein_id=WJG79678.1;transl_table=11 CP118116.1 Genbank gene 2513383 2514624 . - . ID=gene-PUW38_12420;Name=PUW38_12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12420 CP118116.1 Protein Homology CDS 2513383 2514624 . - 0 ID=cds-WJG79679.1;Parent=gene-PUW38_12420;Dbxref=NCBI_GP:WJG79679.1;Name=WJG79679.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=PUW38_12420;product=Nramp family divalent metal transporter;protein_id=WJG79679.1;transl_table=11 CP118116.1 Genbank gene 2514967 2516169 . + . ID=gene-PUW38_12425;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=PUW38_12425 CP118116.1 Protein Homology CDS 2514967 2516169 . + 0 ID=cds-WJG79680.1;Parent=gene-PUW38_12425;Dbxref=NCBI_GP:WJG79680.1;Name=WJG79680.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=PUW38_12425;product=nucleoside permease NupC;protein_id=WJG79680.1;transl_table=11 CP118116.1 Genbank pseudogene 2516222 2518410 . - . ID=gene-PUW38_12430;Name=PUW38_12430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12430;pseudo=true CP118116.1 Protein Homology CDS 2516222 2518410 . - 0 ID=cds-PUW38_12430;Parent=gene-PUW38_12430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=PUW38_12430;product=sensor domain-containing phosphodiesterase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2518601 2518676 . - . ID=gene-PUW38_12435;Name=PUW38_12435;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_12435 CP118116.1 tRNAscan-SE tRNA 2518601 2518676 . - . ID=rna-PUW38_12435;Parent=gene-PUW38_12435;anticodon=(pos:complement(2518641..2518643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12435;product=tRNA-Ala CP118116.1 tRNAscan-SE exon 2518601 2518676 . - . ID=exon-PUW38_12435-1;Parent=rna-PUW38_12435;anticodon=(pos:complement(2518641..2518643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12435;product=tRNA-Ala CP118116.1 Genbank gene 2518898 2519260 . + . ID=gene-PUW38_12440;Name=PUW38_12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12440 CP118116.1 Protein Homology CDS 2518898 2519260 . + 0 ID=cds-WJG79681.1;Parent=gene-PUW38_12440;Dbxref=NCBI_GP:WJG79681.1;Name=WJG79681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=PUW38_12440;product=putative DNA-binding transcriptional regulator;protein_id=WJG79681.1;transl_table=11 CP118116.1 Genbank gene 2519262 2519654 . + . ID=gene-PUW38_12445;Name=PUW38_12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12445 CP118116.1 Protein Homology CDS 2519262 2519654 . + 0 ID=cds-WJG79682.1;Parent=gene-PUW38_12445;Dbxref=NCBI_GP:WJG79682.1;Name=WJG79682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=PUW38_12445;product=putative DNA-binding transcriptional regulator;protein_id=WJG79682.1;transl_table=11 CP118116.1 Genbank pseudogene 2519708 2521122 . - . ID=gene-PUW38_12450;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=PUW38_12450;pseudo=true CP118116.1 Protein Homology CDS 2519708 2521122 . - 0 ID=cds-PUW38_12450;Parent=gene-PUW38_12450;Note=frameshifted;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=PUW38_12450;product=glutamate--tRNA ligase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2521381 2521456 . + . ID=gene-PUW38_12455;Name=PUW38_12455;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_12455 CP118116.1 tRNAscan-SE tRNA 2521381 2521456 . + . ID=rna-PUW38_12455;Parent=gene-PUW38_12455;anticodon=(pos:2521414..2521416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12455;product=tRNA-Val CP118116.1 tRNAscan-SE exon 2521381 2521456 . + . ID=exon-PUW38_12455-1;Parent=rna-PUW38_12455;anticodon=(pos:2521414..2521416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12455;product=tRNA-Val CP118116.1 Genbank gene 2521502 2521577 . + . ID=gene-PUW38_12460;Name=PUW38_12460;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_12460 CP118116.1 tRNAscan-SE tRNA 2521502 2521577 . + . ID=rna-PUW38_12460;Parent=gene-PUW38_12460;anticodon=(pos:2521535..2521537);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12460;product=tRNA-Val CP118116.1 tRNAscan-SE exon 2521502 2521577 . + . ID=exon-PUW38_12460-1;Parent=rna-PUW38_12460;anticodon=(pos:2521535..2521537);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12460;product=tRNA-Val CP118116.1 Genbank gene 2521582 2521657 . + . ID=gene-PUW38_12465;Name=PUW38_12465;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_12465 CP118116.1 tRNAscan-SE tRNA 2521582 2521657 . + . ID=rna-PUW38_12465;Parent=gene-PUW38_12465;anticodon=(pos:2521615..2521617);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12465;product=tRNA-Lys CP118116.1 tRNAscan-SE exon 2521582 2521657 . + . ID=exon-PUW38_12465-1;Parent=rna-PUW38_12465;anticodon=(pos:2521615..2521617);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_12465;product=tRNA-Lys CP118116.1 Genbank pseudogene 2521821 2522704 . - . ID=gene-PUW38_12470;Name=PUW38_12470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12470;pseudo=true CP118116.1 Protein Homology CDS 2521821 2522704 . - 0 ID=cds-PUW38_12470;Parent=gene-PUW38_12470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=PUW38_12470;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2522756 2522914 . - . ID=gene-PUW38_12475;Name=PUW38_12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12475 CP118116.1 Protein Homology CDS 2522756 2522914 . - 0 ID=cds-WJG79683.1;Parent=gene-PUW38_12475;Dbxref=NCBI_GP:WJG79683.1;Name=WJG79683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=PUW38_12475;product=DUF1427 family protein;protein_id=WJG79683.1;transl_table=11 CP118116.1 Genbank gene 2522973 2524229 . - . ID=gene-PUW38_12480;Name=PUW38_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12480 CP118116.1 Protein Homology CDS 2522973 2524229 . - 0 ID=cds-WJG79684.1;Parent=gene-PUW38_12480;Dbxref=NCBI_GP:WJG79684.1;Name=WJG79684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=PUW38_12480;product=nucleoside permease;protein_id=WJG79684.1;transl_table=11 CP118116.1 Genbank gene 2524284 2525117 . - . ID=gene-PUW38_12485;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=PUW38_12485 CP118116.1 Protein Homology CDS 2524284 2525117 . - 0 ID=cds-WJG79685.1;Parent=gene-PUW38_12485;Dbxref=NCBI_GP:WJG79685.1;Name=WJG79685.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=xapA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=PUW38_12485;product=xanthosine phosphorylase;protein_id=WJG79685.1;transl_table=11 CP118116.1 Genbank gene 2525373 2526134 . + . ID=gene-PUW38_12490;Name=PUW38_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12490 CP118116.1 Protein Homology CDS 2525373 2526134 . + 0 ID=cds-WJG79686.1;Parent=gene-PUW38_12490;Dbxref=NCBI_GP:WJG79686.1;Name=WJG79686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=PUW38_12490;product=outer membrane protein;protein_id=WJG79686.1;transl_table=11 CP118116.1 Genbank pseudogene 2526196 2527121 . - . ID=gene-PUW38_12495;Name=PUW38_12495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12495;pseudo=true CP118116.1 Protein Homology CDS 2526196 2527121 . - 0 ID=cds-PUW38_12495;Parent=gene-PUW38_12495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=PUW38_12495;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2527211 2528209 . + . ID=gene-PUW38_12500;Name=PUW38_12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12500 CP118116.1 Protein Homology CDS 2527211 2528209 . + 0 ID=cds-WJG79687.1;Parent=gene-PUW38_12500;Dbxref=NCBI_GP:WJG79687.1;Name=WJG79687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=PUW38_12500;product=bile acid:sodium symporter;protein_id=WJG79687.1;transl_table=11 CP118116.1 Genbank gene 2528206 2528424 . - . ID=gene-PUW38_12505;Name=PUW38_12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12505 CP118116.1 Protein Homology CDS 2528206 2528424 . - 0 ID=cds-WJG79688.1;Parent=gene-PUW38_12505;Dbxref=NCBI_GP:WJG79688.1;Name=WJG79688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=PUW38_12505;product=DUF3820 family protein;protein_id=WJG79688.1;transl_table=11 CP118116.1 Genbank gene 2528426 2530441 . - . ID=gene-PUW38_12510;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=PUW38_12510 CP118116.1 Protein Homology CDS 2528426 2530441 . - 0 ID=cds-WJG79689.1;Parent=gene-PUW38_12510;Dbxref=NCBI_GP:WJG79689.1;Name=WJG79689.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=PUW38_12510;product=NAD-dependent DNA ligase LigA;protein_id=WJG79689.1;transl_table=11 CP118116.1 Genbank gene 2530513 2531499 . - . ID=gene-PUW38_12515;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=PUW38_12515 CP118116.1 Protein Homology CDS 2530513 2531499 . - 0 ID=cds-WJG79690.1;Parent=gene-PUW38_12515;Dbxref=NCBI_GP:WJG79690.1;Name=WJG79690.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=PUW38_12515;product=cell division protein ZipA;protein_id=WJG79690.1;transl_table=11 CP118116.1 Genbank gene 2531731 2532492 . + . ID=gene-PUW38_12520;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=PUW38_12520 CP118116.1 Protein Homology CDS 2531731 2532492 . + 0 ID=cds-WJG79691.1;Parent=gene-PUW38_12520;Dbxref=NCBI_GP:WJG79691.1;Name=WJG79691.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=PUW38_12520;product=sulfate transporter CysZ;protein_id=WJG79691.1;transl_table=11 CP118116.1 Genbank gene 2532656 2533627 . + . ID=gene-PUW38_12525;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=PUW38_12525 CP118116.1 Protein Homology CDS 2532656 2533627 . + 0 ID=cds-WJG79692.1;Parent=gene-PUW38_12525;Dbxref=NCBI_GP:WJG79692.1;Name=WJG79692.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=PUW38_12525;product=cysteine synthase A;protein_id=WJG79692.1;transl_table=11 CP118116.1 Genbank gene 2534011 2534268 . + . ID=gene-PUW38_12530;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=PUW38_12530 CP118116.1 Protein Homology CDS 2534011 2534268 . + 0 ID=cds-WJG79693.1;Parent=gene-PUW38_12530;Dbxref=NCBI_GP:WJG79693.1;Name=WJG79693.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=PUW38_12530;product=phosphocarrier protein Hpr;protein_id=WJG79693.1;transl_table=11 CP118116.1 Genbank gene 2534317 2536044 . + . ID=gene-PUW38_12535;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=PUW38_12535 CP118116.1 Protein Homology CDS 2534317 2536044 . + 0 ID=cds-WJG79694.1;Parent=gene-PUW38_12535;Dbxref=NCBI_GP:WJG79694.1;Name=WJG79694.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=PUW38_12535;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WJG79694.1;transl_table=11 CP118116.1 Genbank gene 2536085 2536594 . + . ID=gene-PUW38_12540;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=PUW38_12540 CP118116.1 Protein Homology CDS 2536085 2536594 . + 0 ID=cds-WJG79695.1;Parent=gene-PUW38_12540;Dbxref=NCBI_GP:WJG79695.1;Name=WJG79695.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=PUW38_12540;product=PTS glucose transporter subunit IIA;protein_id=WJG79695.1;transl_table=11 CP118116.1 Genbank gene 2536758 2536997 . - . ID=gene-PUW38_12545;Name=PUW38_12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12545 CP118116.1 Protein Homology CDS 2536758 2536997 . - 0 ID=cds-WJG79696.1;Parent=gene-PUW38_12545;Dbxref=NCBI_GP:WJG79696.1;Name=WJG79696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=PUW38_12545;product=cytoplasmic protein;protein_id=WJG79696.1;transl_table=11 CP118116.1 Genbank gene 2536994 2537860 . - . ID=gene-PUW38_12550;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=PUW38_12550 CP118116.1 Protein Homology CDS 2536994 2537860 . - 0 ID=cds-WJG79697.1;Parent=gene-PUW38_12550;Dbxref=NCBI_GP:WJG79697.1;Name=WJG79697.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=PUW38_12550;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WJG79697.1;transl_table=11 CP118116.1 Genbank pseudogene 2537943 2539234 . + . ID=gene-PUW38_12555;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=pseudogene;locus_tag=PUW38_12555;pseudo=true CP118116.1 Protein Homology CDS 2537943 2539234 . + 0 ID=cds-PUW38_12555;Parent=gene-PUW38_12555;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=PUW38_12555;product=transcriptional regulator PtsJ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2539249 2539968 . + . ID=gene-PUW38_12560;Name=PUW38_12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12560 CP118116.1 Protein Homology CDS 2539249 2539968 . + 0 ID=cds-WJG79698.1;Parent=gene-PUW38_12560;Dbxref=NCBI_GP:WJG79698.1;Name=WJG79698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=PUW38_12560;product=GMP synthase;protein_id=WJG79698.1;transl_table=11 CP118116.1 Genbank gene 2540027 2540410 . + . ID=gene-PUW38_12565;Name=PUW38_12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12565 CP118116.1 Protein Homology CDS 2540027 2540410 . + 0 ID=cds-WJG79699.1;Parent=gene-PUW38_12565;Dbxref=NCBI_GP:WJG79699.1;Name=WJG79699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710732.1;locus_tag=PUW38_12565;product=YfeK family protein;protein_id=WJG79699.1;transl_table=11 CP118116.1 Genbank gene 2540510 2541118 . - . ID=gene-PUW38_12570;Name=PUW38_12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12570 CP118116.1 Protein Homology CDS 2540510 2541118 . - 0 ID=cds-WJG79700.1;Parent=gene-PUW38_12570;Dbxref=NCBI_GP:WJG79700.1;Name=WJG79700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666526.1;locus_tag=PUW38_12570;product=tetratricopeptide repeat protein;protein_id=WJG79700.1;transl_table=11 CP118116.1 Genbank gene 2541370 2542281 . - . ID=gene-PUW38_12575;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=PUW38_12575 CP118116.1 Protein Homology CDS 2541370 2542281 . - 0 ID=cds-WJG79701.1;Parent=gene-PUW38_12575;Dbxref=NCBI_GP:WJG79701.1;Name=WJG79701.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=PUW38_12575;product=cysteine synthase CysM;protein_id=WJG79701.1;transl_table=11 CP118116.1 Genbank gene 2542349 2543446 . - . ID=gene-PUW38_12580;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=PUW38_12580 CP118116.1 Protein Homology CDS 2542349 2543446 . - 0 ID=cds-WJG79702.1;Parent=gene-PUW38_12580;Dbxref=NCBI_GP:WJG79702.1;Name=WJG79702.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=PUW38_12580;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WJG79702.1;transl_table=11 CP118116.1 Genbank gene 2543436 2544311 . - . ID=gene-PUW38_12585;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=PUW38_12585 CP118116.1 Protein Homology CDS 2543436 2544311 . - 0 ID=cds-WJG79703.1;Parent=gene-PUW38_12585;Dbxref=NCBI_GP:WJG79703.1;Name=WJG79703.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=PUW38_12585;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WJG79703.1;transl_table=11 CP118116.1 Genbank gene 2544311 2545144 . - . ID=gene-PUW38_12590;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=PUW38_12590 CP118116.1 Protein Homology CDS 2544311 2545144 . - 0 ID=cds-WJG79704.1;Parent=gene-PUW38_12590;Dbxref=NCBI_GP:WJG79704.1;Name=WJG79704.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=PUW38_12590;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WJG79704.1;transl_table=11 CP118116.1 Genbank gene 2545144 2546160 . - . ID=gene-PUW38_12595;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=PUW38_12595 CP118116.1 Protein Homology CDS 2545144 2546160 . - 0 ID=cds-WJG79705.1;Parent=gene-PUW38_12595;Dbxref=NCBI_GP:WJG79705.1;Name=WJG79705.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=PUW38_12595;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WJG79705.1;transl_table=11 CP118116.1 Genbank gene 2546318 2547115 . - . ID=gene-PUW38_12600;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=PUW38_12600 CP118116.1 Protein Homology CDS 2546318 2547115 . - 0 ID=cds-WJG79706.1;Parent=gene-PUW38_12600;Dbxref=NCBI_GP:WJG79706.1;Name=WJG79706.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517461.1;locus_tag=PUW38_12600;product=SDR family oxidoreductase UcpA;protein_id=WJG79706.1;transl_table=11 CP118116.1 Genbank gene 2547352 2548251 . - . ID=gene-PUW38_12605;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=PUW38_12605 CP118116.1 Protein Homology CDS 2547352 2548251 . - 0 ID=cds-WJG79707.1;Parent=gene-PUW38_12605;Dbxref=NCBI_GP:WJG79707.1;Name=WJG79707.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=PUW38_12605;product=porphyrinogen peroxidase;protein_id=WJG79707.1;transl_table=11 CP118116.1 Genbank pseudogene 2548346 2548920 . - . ID=gene-PUW38_12610;Name=PUW38_12610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12610;pseudo=true CP118116.1 Protein Homology CDS 2548346 2548920 . - 0 ID=cds-PUW38_12610;Parent=gene-PUW38_12610;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=PUW38_12610;product=RpoE-regulated lipoprotein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2548982 2549430 . - . ID=gene-PUW38_12615;Name=PUW38_12615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12615;pseudo=true CP118116.1 Protein Homology CDS 2548982 2549430 . - 0 ID=cds-PUW38_12615;Parent=gene-PUW38_12615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=PUW38_12615;product=DUF2919 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2549417 2549842 . - . ID=gene-PUW38_12620;Name=PUW38_12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12620 CP118116.1 Protein Homology CDS 2549417 2549842 . - 0 ID=cds-WJG79708.1;Parent=gene-PUW38_12620;Dbxref=NCBI_GP:WJG79708.1;Name=WJG79708.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=PUW38_12620;product=GNAT family acetyltransferase;protein_id=WJG79708.1;transl_table=11 CP118116.1 Genbank gene 2550055 2550924 . + . ID=gene-PUW38_12625;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=PUW38_12625 CP118116.1 Protein Homology CDS 2550055 2550924 . + 0 ID=cds-WJG79709.1;Parent=gene-PUW38_12625;Dbxref=NCBI_GP:WJG79709.1;Name=WJG79709.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=PUW38_12625;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WJG79709.1;transl_table=11 CP118116.1 Genbank gene 2550927 2551826 . + . ID=gene-PUW38_12630;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=PUW38_12630 CP118116.1 Protein Homology CDS 2550927 2551826 . + 0 ID=cds-WJG79710.1;Parent=gene-PUW38_12630;Dbxref=NCBI_GP:WJG79710.1;Name=WJG79710.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=PUW38_12630;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WJG79710.1;transl_table=11 CP118116.1 Genbank gene 2551847 2552176 . + . ID=gene-PUW38_12635;Name=PUW38_12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12635 CP118116.1 Protein Homology CDS 2551847 2552176 . + 0 ID=cds-WJG79711.1;Parent=gene-PUW38_12635;Dbxref=NCBI_GP:WJG79711.1;Name=WJG79711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=PUW38_12635;product=hypothetical protein;protein_id=WJG79711.1;transl_table=11 CP118116.1 Genbank pseudogene 2552231 2552458 . + . ID=gene-PUW38_12640;Name=PUW38_12640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12640;pseudo=true CP118116.1 Protein Homology CDS 2552231 2552458 . + 0 ID=cds-PUW38_12640;Parent=gene-PUW38_12640;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=PUW38_12640;product=DUF1963 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2552625 2553677 . - . ID=gene-PUW38_12645;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=PUW38_12645 CP118116.1 Protein Homology CDS 2552625 2553677 . - 0 ID=cds-WJG79712.1;Parent=gene-PUW38_12645;Dbxref=NCBI_GP:WJG79712.1;Name=WJG79712.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=PUW38_12645;product=HTH-type transcriptional regulator EutR;protein_id=WJG79712.1;transl_table=11 CP118116.1 Genbank gene 2553725 2554219 . - . ID=gene-PUW38_12650;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=PUW38_12650 CP118116.1 Protein Homology CDS 2553725 2554219 . - 0 ID=cds-WJG79713.1;Parent=gene-PUW38_12650;Dbxref=NCBI_GP:WJG79713.1;Name=WJG79713.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=PUW38_12650;product=ethanolamine utilization microcompartment protein EutK;protein_id=WJG79713.1;transl_table=11 CP118116.1 Genbank gene 2554232 2554891 . - . ID=gene-PUW38_12655;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=PUW38_12655 CP118116.1 Protein Homology CDS 2554232 2554891 . - 0 ID=cds-WJG79714.1;Parent=gene-PUW38_12655;Dbxref=NCBI_GP:WJG79714.1;Name=WJG79714.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=PUW38_12655;product=ethanolamine utilization microcompartment protein EutL;protein_id=WJG79714.1;transl_table=11 CP118116.1 Genbank gene 2554901 2555797 . - . ID=gene-PUW38_12660;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=PUW38_12660 CP118116.1 Protein Homology CDS 2554901 2555797 . - 0 ID=cds-WJG79715.1;Parent=gene-PUW38_12660;Dbxref=NCBI_GP:WJG79715.1;Name=WJG79715.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=PUW38_12660;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WJG79715.1;transl_table=11 CP118116.1 Genbank gene 2555816 2557177 . - . ID=gene-PUW38_12665;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=PUW38_12665 CP118116.1 Protein Homology CDS 2555816 2557177 . - 0 ID=cds-WJG79716.1;Parent=gene-PUW38_12665;Dbxref=NCBI_GP:WJG79716.1;Name=WJG79716.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=PUW38_12665;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WJG79716.1;transl_table=11 CP118116.1 Genbank gene 2557189 2558592 . - . ID=gene-PUW38_12670;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=PUW38_12670 CP118116.1 Protein Homology CDS 2557189 2558592 . - 0 ID=cds-WJG79717.1;Parent=gene-PUW38_12670;Dbxref=NCBI_GP:WJG79717.1;Name=WJG79717.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=PUW38_12670;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WJG79717.1;transl_table=11 CP118116.1 Genbank gene 2558589 2559815 . - . ID=gene-PUW38_12675;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=PUW38_12675 CP118116.1 Protein Homology CDS 2558589 2559815 . - 0 ID=cds-WJG79718.1;Parent=gene-PUW38_12675;Dbxref=NCBI_GP:WJG79718.1;Name=WJG79718.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=PUW38_12675;product=ethanolamine utilization protein EutH;protein_id=WJG79718.1;transl_table=11 CP118116.1 Genbank gene 2559935 2561122 . - . ID=gene-PUW38_12680;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=PUW38_12680 CP118116.1 Protein Homology CDS 2559935 2561122 . - 0 ID=cds-WJG79719.1;Parent=gene-PUW38_12680;Dbxref=NCBI_GP:WJG79719.1;Name=WJG79719.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=PUW38_12680;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WJG79719.1;transl_table=11 CP118116.1 Genbank pseudogene 2561112 2561950 . - . ID=gene-PUW38_12685;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=pseudogene;locus_tag=PUW38_12685;pseudo=true CP118116.1 Protein Homology CDS 2561112 2561950 . - 0 ID=cds-PUW38_12685;Parent=gene-PUW38_12685;Note=frameshifted;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=PUW38_12685;product=ethanolamine utilization protein EutJ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2561961 2563364 . - . ID=gene-PUW38_12690;Name=PUW38_12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12690 CP118116.1 Protein Homology CDS 2561961 2563364 . - 0 ID=cds-WJG79720.1;Parent=gene-PUW38_12690;Dbxref=NCBI_GP:WJG79720.1;Name=WJG79720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=PUW38_12690;product=aldehyde dehydrogenase EutE;protein_id=WJG79720.1;transl_table=11 CP118116.1 Genbank gene 2563376 2563663 . - . ID=gene-PUW38_12695;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=PUW38_12695 CP118116.1 Protein Homology CDS 2563376 2563663 . - 0 ID=cds-WJG79721.1;Parent=gene-PUW38_12695;Dbxref=NCBI_GP:WJG79721.1;Name=WJG79721.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=PUW38_12695;product=ethanolamine utilization microcompartment protein EutN;protein_id=WJG79721.1;transl_table=11 CP118116.1 Genbank gene 2563776 2564066 . - . ID=gene-PUW38_12700;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=PUW38_12700 CP118116.1 Protein Homology CDS 2563776 2564066 . - 0 ID=cds-WJG79722.1;Parent=gene-PUW38_12700;Dbxref=NCBI_GP:WJG79722.1;Name=WJG79722.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=PUW38_12700;product=ethanolamine utilization microcompartment protein EutM;protein_id=WJG79722.1;transl_table=11 CP118116.1 Genbank gene 2564107 2565123 . - . ID=gene-PUW38_12705;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PUW38_12705 CP118116.1 Protein Homology CDS 2564107 2565123 . - 0 ID=cds-WJG79723.1;Parent=gene-PUW38_12705;Dbxref=NCBI_GP:WJG79723.1;Name=WJG79723.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=PUW38_12705;product=phosphate acetyltransferase;protein_id=WJG79723.1;transl_table=11 CP118116.1 Genbank gene 2565120 2565923 . - . ID=gene-PUW38_12710;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=PUW38_12710 CP118116.1 Protein Homology CDS 2565120 2565923 . - 0 ID=cds-WJG79724.1;Parent=gene-PUW38_12710;Dbxref=NCBI_GP:WJG79724.1;Name=WJG79724.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=PUW38_12710;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WJG79724.1;transl_table=11 CP118116.1 Genbank gene 2565920 2566609 . - . ID=gene-PUW38_12715;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=PUW38_12715 CP118116.1 Protein Homology CDS 2565920 2566609 . - 0 ID=cds-WJG79725.1;Parent=gene-PUW38_12715;Dbxref=NCBI_GP:WJG79725.1;Name=WJG79725.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=PUW38_12715;product=ethanolamine utilization acetate kinase EutQ;protein_id=WJG79725.1;transl_table=11 CP118116.1 Genbank gene 2566587 2567066 . - . ID=gene-PUW38_12720;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=PUW38_12720 CP118116.1 Protein Homology CDS 2566587 2567066 . - 0 ID=cds-WJG79726.1;Parent=gene-PUW38_12720;Dbxref=NCBI_GP:WJG79726.1;Name=WJG79726.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=PUW38_12720;product=ethanolamine utilization acetate kinase EutP;protein_id=WJG79726.1;transl_table=11 CP118116.1 Genbank gene 2567079 2567414 . - . ID=gene-PUW38_12725;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=PUW38_12725 CP118116.1 Protein Homology CDS 2567079 2567414 . - 0 ID=cds-WJG79727.1;Parent=gene-PUW38_12725;Dbxref=NCBI_GP:WJG79727.1;Name=WJG79727.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=PUW38_12725;product=ethanolamine utilization microcompartment protein EutS;protein_id=WJG79727.1;transl_table=11 CP118116.1 Genbank pseudogene 2567831 2570109 . - . ID=gene-PUW38_12730;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=pseudogene;locus_tag=PUW38_12730;pseudo=true CP118116.1 Protein Homology CDS 2567831 2570109 . - 0 ID=cds-PUW38_12730;Parent=gene-PUW38_12730;Note=frameshifted;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=PUW38_12730;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2570381 2571331 . + . ID=gene-PUW38_12735;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PUW38_12735 CP118116.1 Protein Homology CDS 2570381 2571331 . + 0 ID=cds-WJG79728.1;Parent=gene-PUW38_12735;Dbxref=NCBI_GP:WJG79728.1;Name=WJG79728.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=PUW38_12735;product=transaldolase;protein_id=WJG79728.1;transl_table=11 CP118116.1 Genbank pseudogene 2571351 2573350 . + . ID=gene-PUW38_12740;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=pseudogene;locus_tag=PUW38_12740;pseudo=true CP118116.1 Protein Homology CDS 2571351 2573350 . + 0 ID=cds-PUW38_12740;Parent=gene-PUW38_12740;Note=frameshifted;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=PUW38_12740;product=transketolase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2573413 2573643 . - . ID=gene-PUW38_12745;Name=PUW38_12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12745 CP118116.1 Protein Homology CDS 2573413 2573643 . - 0 ID=cds-WJG83240.1;Parent=gene-PUW38_12745;Dbxref=NCBI_GP:WJG83240.1;Name=WJG83240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=PUW38_12745;product=hypothetical protein;protein_id=WJG83240.1;transl_table=11 CP118116.1 Genbank gene 2573771 2574814 . - . ID=gene-PUW38_12750;Name=PUW38_12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12750 CP118116.1 Protein Homology CDS 2573771 2574814 . - 0 ID=cds-WJG79729.1;Parent=gene-PUW38_12750;Dbxref=NCBI_GP:WJG79729.1;Name=WJG79729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=PUW38_12750;product=DUF1176 domain-containing protein;protein_id=WJG79729.1;transl_table=11 CP118116.1 Genbank gene 2574939 2575514 . - . ID=gene-PUW38_12755;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=PUW38_12755 CP118116.1 Protein Homology CDS 2574939 2575514 . - 0 ID=cds-WJG79730.1;Parent=gene-PUW38_12755;Dbxref=NCBI_GP:WJG79730.1;Name=WJG79730.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=PUW38_12755;product=GDP-mannose pyrophosphatase NudK;protein_id=WJG79730.1;transl_table=11 CP118116.1 Genbank gene 2575718 2577016 . + . ID=gene-PUW38_12760;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=PUW38_12760 CP118116.1 Protein Homology CDS 2575718 2577016 . + 0 ID=cds-WJG79731.1;Parent=gene-PUW38_12760;Dbxref=NCBI_GP:WJG79731.1;Name=WJG79731.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=PUW38_12760;product=penicillin binding protein PBP4B;protein_id=WJG79731.1;transl_table=11 CP118116.1 Genbank pseudogene 2577465 2579424 . - . ID=gene-PUW38_12765;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=pseudogene;locus_tag=PUW38_12765;pseudo=true CP118116.1 Protein Homology CDS 2577465 2579424 . - 0 ID=cds-PUW38_12765;Parent=gene-PUW38_12765;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=PUW38_12765;product=formate-dependent uric acid utilization protein AegA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2579610 2581310 . + . ID=gene-PUW38_12770;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=PUW38_12770 CP118116.1 Protein Homology CDS 2579610 2581310 . + 0 ID=cds-WJG79732.1;Parent=gene-PUW38_12770;Dbxref=NCBI_GP:WJG79732.1;Name=WJG79732.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=PUW38_12770;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WJG79732.1;transl_table=11 CP118116.1 Genbank pseudogene 2581495 2584608 . + . ID=gene-PUW38_12775;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=pseudogene;locus_tag=PUW38_12775;pseudo=true CP118116.1 Protein Homology CDS 2581495 2584608 . + 0 ID=cds-PUW38_12775;Parent=gene-PUW38_12775;Note=internal stop;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=PUW38_12775;product=multidrug efflux RND transporter permease AcrD;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2584715 2584768 . - . ID=gene-PUW38_12780;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=pseudogene;locus_tag=PUW38_12780;pseudo=true CP118116.1 Protein Homology CDS 2584715 2584768 . - 0 ID=cds-PUW38_12780;Parent=gene-PUW38_12780;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=PUW38_12780;product=protein YpfM;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2585181 2585537 . + . ID=gene-PUW38_12785;Name=PUW38_12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12785 CP118116.1 Protein Homology CDS 2585181 2585537 . + 0 ID=cds-WJG79733.1;Parent=gene-PUW38_12785;Dbxref=NCBI_GP:WJG79733.1;Name=WJG79733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=PUW38_12785;product=ArsC family reductase;protein_id=WJG79733.1;transl_table=11 CP118116.1 Genbank gene 2585541 2586668 . + . ID=gene-PUW38_12790;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=PUW38_12790 CP118116.1 Protein Homology CDS 2585541 2586668 . + 0 ID=cds-WJG79734.1;Parent=gene-PUW38_12790;Dbxref=NCBI_GP:WJG79734.1;Name=WJG79734.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=PUW38_12790;product=succinyl-diaminopimelate desuccinylase;protein_id=WJG79734.1;transl_table=11 CP118116.1 Genbank gene 2586696 2586896 . + . ID=gene-PUW38_12795;Name=PUW38_12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12795 CP118116.1 Protein Homology CDS 2586696 2586896 . + 0 ID=cds-WJG79735.1;Parent=gene-PUW38_12795;Dbxref=NCBI_GP:WJG79735.1;Name=WJG79735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=PUW38_12795;product=YpfN family protein;protein_id=WJG79735.1;transl_table=11 CP118116.1 Genbank pseudogene 2586923 2588940 . - . ID=gene-PUW38_12800;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=pseudogene;locus_tag=PUW38_12800;pseudo=true CP118116.1 Protein Homology CDS 2586923 2588940 . - 0 ID=cds-PUW38_12800;Parent=gene-PUW38_12800;Note=frameshifted;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=PUW38_12800;product=tRNA cytosine(34) acetyltransferase TmcA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2588956 2589819 . - . ID=gene-PUW38_12805;Name=PUW38_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12805 CP118116.1 Protein Homology CDS 2588956 2589819 . - 0 ID=cds-WJG79736.1;Parent=gene-PUW38_12805;Dbxref=NCBI_GP:WJG79736.1;Name=WJG79736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=PUW38_12805;product=neutral zinc metallopeptidase;protein_id=WJG79736.1;transl_table=11 CP118116.1 Genbank gene 2589950 2590663 . - . ID=gene-PUW38_12810;Name=PUW38_12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12810 CP118116.1 Protein Homology CDS 2589950 2590663 . - 0 ID=cds-WJG79737.1;Parent=gene-PUW38_12810;Dbxref=NCBI_GP:WJG79737.1;Name=WJG79737.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=PUW38_12810;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WJG79737.1;transl_table=11 CP118116.1 Genbank gene 2590838 2591872 . - . ID=gene-PUW38_12815;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=PUW38_12815 CP118116.1 Protein Homology CDS 2590838 2591872 . - 0 ID=cds-WJG79738.1;Parent=gene-PUW38_12815;Dbxref=NCBI_GP:WJG79738.1;Name=WJG79738.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=PUW38_12815;product=outer membrane protein assembly factor BamC;protein_id=WJG79738.1;transl_table=11 CP118116.1 Genbank gene 2591889 2592767 . - . ID=gene-PUW38_12820;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=PUW38_12820 CP118116.1 Protein Homology CDS 2591889 2592767 . - 0 ID=cds-WJG79739.1;Parent=gene-PUW38_12820;Dbxref=NCBI_GP:WJG79739.1;Name=WJG79739.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=PUW38_12820;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WJG79739.1;transl_table=11 CP118116.1 Genbank pseudogene 2592913 2593484 . + . ID=gene-PUW38_12825;Name=PUW38_12825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12825;pseudo=true CP118116.1 Protein Homology CDS 2592913 2593484 . + 0 ID=cds-PUW38_12825;Parent=gene-PUW38_12825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=PUW38_12825;product=glycine cleavage system transcriptional repressor;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2593484 2593954 . + . ID=gene-PUW38_12830;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=PUW38_12830 CP118116.1 Protein Homology CDS 2593484 2593954 . + 0 ID=cds-WJG79740.1;Parent=gene-PUW38_12830;Dbxref=NCBI_GP:WJG79740.1;Name=WJG79740.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=PUW38_12830;product=thioredoxin-dependent thiol peroxidase;protein_id=WJG79740.1;transl_table=11 CP118116.1 Genbank gene 2594001 2595140 . - . ID=gene-PUW38_12835;Name=PUW38_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12835 CP118116.1 Protein Homology CDS 2594001 2595140 . - 0 ID=cds-WJG79741.1;Parent=gene-PUW38_12835;Dbxref=NCBI_GP:WJG79741.1;Name=WJG79741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=PUW38_12835;product=glycerate kinase;protein_id=WJG79741.1;transl_table=11 CP118116.1 Genbank gene 2595146 2596414 . - . ID=gene-PUW38_12840;Name=PUW38_12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12840 CP118116.1 Protein Homology CDS 2595146 2596414 . - 0 ID=cds-WJG79742.1;Parent=gene-PUW38_12840;Dbxref=NCBI_GP:WJG79742.1;Name=WJG79742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=PUW38_12840;product=GntP family permease;protein_id=WJG79742.1;transl_table=11 CP118116.1 Genbank gene 2596482 2597669 . - . ID=gene-PUW38_12845;Name=PUW38_12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12845 CP118116.1 Protein Homology CDS 2596482 2597669 . - 0 ID=cds-WJG79743.1;Parent=gene-PUW38_12845;Dbxref=NCBI_GP:WJG79743.1;Name=WJG79743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=PUW38_12845;product=sugar diacid recognition domain-containing protein;protein_id=WJG79743.1;transl_table=11 CP118116.1 Genbank pseudogene 2597945 2599011 . - . ID=gene-PUW38_12850;Name=PUW38_12850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12850;pseudo=true CP118116.1 Protein Homology CDS 2597945 2599011 . - 0 ID=cds-PUW38_12850;Parent=gene-PUW38_12850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=PUW38_12850;product=AI-2E family transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2599219 2600682 . + . ID=gene-PUW38_12855;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=PUW38_12855 CP118116.1 Protein Homology CDS 2599219 2600682 . + 0 ID=cds-WJG79744.1;Parent=gene-PUW38_12855;Dbxref=NCBI_GP:WJG79744.1;Name=WJG79744.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=PUW38_12855;product=beta-barrel assembly-enhancing protease;protein_id=WJG79744.1;transl_table=11 CP118116.1 Genbank gene 2600722 2601081 . + . ID=gene-PUW38_12860;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PUW38_12860 CP118116.1 Protein Homology CDS 2600722 2601081 . + 0 ID=cds-WJG79745.1;Parent=gene-PUW38_12860;Dbxref=NCBI_GP:WJG79745.1;Name=WJG79745.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=PUW38_12860;product=arsenate reductase (glutaredoxin);protein_id=WJG79745.1;transl_table=11 CP118116.1 Genbank gene 2601108 2601809 . - . ID=gene-PUW38_12865;Name=PUW38_12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12865 CP118116.1 Protein Homology CDS 2601108 2601809 . - 0 ID=cds-WJG83241.1;Parent=gene-PUW38_12865;Dbxref=NCBI_GP:WJG83241.1;Name=WJG83241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=PUW38_12865;product=DnaA inactivator Hda;protein_id=WJG83241.1;transl_table=11 CP118116.1 Genbank gene 2601904 2603193 . - . ID=gene-PUW38_12870;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=PUW38_12870 CP118116.1 Protein Homology CDS 2601904 2603193 . - 0 ID=cds-WJG79746.1;Parent=gene-PUW38_12870;Dbxref=NCBI_GP:WJG79746.1;Name=WJG79746.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=PUW38_12870;product=uracil permease;protein_id=WJG79746.1;transl_table=11 CP118116.1 Genbank gene 2603280 2603906 . - . ID=gene-PUW38_12875;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=PUW38_12875 CP118116.1 Protein Homology CDS 2603280 2603906 . - 0 ID=cds-WJG79747.1;Parent=gene-PUW38_12875;Dbxref=NCBI_GP:WJG79747.1;Name=WJG79747.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=PUW38_12875;product=uracil phosphoribosyltransferase;protein_id=WJG79747.1;transl_table=11 CP118116.1 Genbank gene 2604318 2605355 . + . ID=gene-PUW38_12880;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=PUW38_12880 CP118116.1 Protein Homology CDS 2604318 2605355 . + 0 ID=cds-WJG79748.1;Parent=gene-PUW38_12880;Dbxref=NCBI_GP:WJG79748.1;Name=WJG79748.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=PUW38_12880;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WJG79748.1;transl_table=11 CP118116.1 Genbank gene 2605355 2605993 . + . ID=gene-PUW38_12885;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=PUW38_12885 CP118116.1 Protein Homology CDS 2605355 2605993 . + 0 ID=cds-WJG79749.1;Parent=gene-PUW38_12885;Dbxref=NCBI_GP:WJG79749.1;Name=WJG79749.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=PUW38_12885;product=phosphoribosylglycinamide formyltransferase;protein_id=WJG79749.1;transl_table=11 CP118116.1 Genbank gene 2606182 2608248 . + . ID=gene-PUW38_12890;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=PUW38_12890 CP118116.1 Protein Homology CDS 2606182 2608248 . + 0 ID=cds-WJG79750.1;Parent=gene-PUW38_12890;Dbxref=NCBI_GP:WJG79750.1;Name=WJG79750.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=PUW38_12890;product=polyphosphate kinase 1;protein_id=WJG79750.1;transl_table=11 CP118116.1 Genbank gene 2608253 2609794 . + . ID=gene-PUW38_12895;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=PUW38_12895 CP118116.1 Protein Homology CDS 2608253 2609794 . + 0 ID=cds-WJG83242.1;Parent=gene-PUW38_12895;Dbxref=NCBI_GP:WJG83242.1;Name=WJG83242.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=PUW38_12895;product=exopolyphosphatase;protein_id=WJG83242.1;transl_table=11 CP118116.1 Genbank gene 2609830 2612043 . - . ID=gene-PUW38_12900;Name=PUW38_12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12900 CP118116.1 Protein Homology CDS 2609830 2612043 . - 0 ID=cds-WJG79751.1;Parent=gene-PUW38_12900;Dbxref=NCBI_GP:WJG79751.1;Name=WJG79751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=PUW38_12900;product=sensor domain-containing phosphodiesterase;protein_id=WJG79751.1;transl_table=11 CP118116.1 Genbank gene 2612140 2612277 . - . ID=gene-PUW38_12905;Name=PUW38_12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12905 CP118116.1 Protein Homology CDS 2612140 2612277 . - 0 ID=cds-WJG79752.1;Parent=gene-PUW38_12905;Dbxref=NCBI_GP:WJG79752.1;Name=WJG79752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=PUW38_12905;product=hypothetical protein;protein_id=WJG79752.1;transl_table=11 CP118116.1 Genbank gene 2612456 2612647 . + . ID=gene-PUW38_12910;Name=PUW38_12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12910 CP118116.1 Protein Homology CDS 2612456 2612647 . + 0 ID=cds-WJG79753.1;Parent=gene-PUW38_12910;Dbxref=NCBI_GP:WJG79753.1;Name=WJG79753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=PUW38_12910;product=YfgG family protein;protein_id=WJG79753.1;transl_table=11 CP118116.1 Genbank pseudogene 2612725 2612868 . - . ID=gene-PUW38_12915;Name=PUW38_12915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12915;pseudo=true CP118116.1 Protein Homology CDS 2612725 2612868 . - 0 ID=cds-PUW38_12915;Parent=gene-PUW38_12915;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=PUW38_12915;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2613341 2613670 . + . ID=gene-PUW38_12920;Name=PUW38_12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12920 CP118116.1 Protein Homology CDS 2613341 2613670 . + 0 ID=cds-WJG79754.1;Parent=gene-PUW38_12920;Dbxref=NCBI_GP:WJG79754.1;Name=WJG79754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=PUW38_12920;product=DUF1493 family protein;protein_id=WJG79754.1;transl_table=11 CP118116.1 Genbank pseudogene 2613750 2614058 . - . ID=gene-PUW38_12925;Name=PUW38_12925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12925;pseudo=true CP118116.1 Protein Homology CDS 2613750 2614058 . - 0 ID=cds-PUW38_12925;Parent=gene-PUW38_12925;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611898.1;locus_tag=PUW38_12925;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2614200 2615777 . - . ID=gene-PUW38_12930;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=PUW38_12930 CP118116.1 Protein Homology CDS 2614200 2615777 . - 0 ID=cds-WJG79755.1;Parent=gene-PUW38_12930;Dbxref=NCBI_GP:WJG79755.1;Name=WJG79755.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=PUW38_12930;product=glutamine-hydrolyzing GMP synthase;protein_id=WJG79755.1;transl_table=11 CP118116.1 Genbank gene 2615847 2617313 . - . ID=gene-PUW38_12935;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=PUW38_12935 CP118116.1 Protein Homology CDS 2615847 2617313 . - 0 ID=cds-WJG79756.1;Parent=gene-PUW38_12935;Dbxref=NCBI_GP:WJG79756.1;Name=WJG79756.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=PUW38_12935;product=IMP dehydrogenase;protein_id=WJG79756.1;transl_table=11 CP118116.1 Genbank pseudogene 2617474 2618822 . + . ID=gene-PUW38_12940;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=pseudogene;locus_tag=PUW38_12940;pseudo=true CP118116.1 Protein Homology CDS 2617474 2618822 . + 0 ID=cds-PUW38_12940;Parent=gene-PUW38_12940;Note=frameshifted;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=PUW38_12940;product=exodeoxyribonuclease VII large subunit;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2618984 2625080 . - . ID=gene-PUW38_12945;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=pseudogene;locus_tag=PUW38_12945;pseudo=true CP118116.1 Protein Homology CDS 2618984 2625080 . - 0 ID=cds-PUW38_12945;Parent=gene-PUW38_12945;Note=frameshifted;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=PUW38_12945;product=fibronectin-binding autotransporter adhesin ShdA;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2625640 2625726 . - . ID=gene-PUW38_12950;Name=PUW38_12950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_12950;pseudo=true CP118116.1 Protein Homology CDS 2625640 2625726 . - 0 ID=cds-PUW38_12950;Parent=gene-PUW38_12950;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=PUW38_12950;product=IS1 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2625741 2633042 . - . ID=gene-PUW38_12955;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=pseudogene;locus_tag=PUW38_12955;pseudo=true CP118116.1 Protein Homology CDS 2625741 2633042 . - 0 ID=cds-PUW38_12955;Parent=gene-PUW38_12955;Note=frameshifted;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=PUW38_12955;product=DUF823/DUF824 repeat adhesin RatB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2633208 2638805 . - . ID=gene-PUW38_12960;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=PUW38_12960 CP118116.1 Protein Homology CDS 2633208 2638805 . - 0 ID=cds-WJG79757.1;Parent=gene-PUW38_12960;Dbxref=NCBI_GP:WJG79757.1;Name=WJG79757.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=PUW38_12960;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WJG79757.1;transl_table=11 CP118116.1 Genbank gene 2638923 2639882 . - . ID=gene-PUW38_12965;Name=PUW38_12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12965 CP118116.1 Protein Homology CDS 2638923 2639882 . - 0 ID=cds-WJG79758.1;Parent=gene-PUW38_12965;Dbxref=NCBI_GP:WJG79758.1;Name=WJG79758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=PUW38_12965;product=SinI family autotransporter-associated protein;protein_id=WJG79758.1;transl_table=11 CP118116.1 Genbank pseudogene 2639940 2642132 . - . ID=gene-PUW38_12970;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=pseudogene;locus_tag=PUW38_12970;pseudo=true CP118116.1 Protein Homology CDS 2639940 2642132 . - 0 ID=cds-PUW38_12970;Parent=gene-PUW38_12970;Note=frameshifted;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=PUW38_12970;product=intimin-like inverse autotransporter SinH;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2642478 2642699 . - . ID=gene-PUW38_12975;Name=PUW38_12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12975 CP118116.1 Protein Homology CDS 2642478 2642699 . - 0 ID=cds-WJG79759.1;Parent=gene-PUW38_12975;Dbxref=NCBI_GP:WJG79759.1;Name=WJG79759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=PUW38_12975;product=zinc ribbon domain-containing protein;protein_id=WJG79759.1;transl_table=11 CP118116.1 Genbank gene 2642788 2644260 . - . ID=gene-PUW38_12980;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=PUW38_12980 CP118116.1 Protein Homology CDS 2642788 2644260 . - 0 ID=cds-WJG79760.1;Parent=gene-PUW38_12980;Dbxref=NCBI_GP:WJG79760.1;Name=WJG79760.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=PUW38_12980;product=ribosome biogenesis GTPase Der;protein_id=WJG79760.1;transl_table=11 CP118116.1 Genbank gene 2644379 2645557 . - . ID=gene-PUW38_12985;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=PUW38_12985 CP118116.1 Protein Homology CDS 2644379 2645557 . - 0 ID=cds-WJG79761.1;Parent=gene-PUW38_12985;Dbxref=NCBI_GP:WJG79761.1;Name=WJG79761.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=PUW38_12985;product=outer membrane protein assembly factor BamB;protein_id=WJG79761.1;transl_table=11 CP118116.1 Genbank gene 2645568 2646188 . - . ID=gene-PUW38_12990;Name=PUW38_12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_12990 CP118116.1 Protein Homology CDS 2645568 2646188 . - 0 ID=cds-WJG79762.1;Parent=gene-PUW38_12990;Dbxref=NCBI_GP:WJG79762.1;Name=WJG79762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=PUW38_12990;product=YfgM family protein;protein_id=WJG79762.1;transl_table=11 CP118116.1 Genbank gene 2646202 2647476 . - . ID=gene-PUW38_12995;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=PUW38_12995 CP118116.1 Protein Homology CDS 2646202 2647476 . - 0 ID=cds-WJG79763.1;Parent=gene-PUW38_12995;Dbxref=NCBI_GP:WJG79763.1;Name=WJG79763.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=PUW38_12995;product=histidine--tRNA ligase;protein_id=WJG79763.1;transl_table=11 CP118116.1 Genbank gene 2647587 2648705 . - . ID=gene-PUW38_13000;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=PUW38_13000 CP118116.1 Protein Homology CDS 2647587 2648705 . - 0 ID=cds-WJG79764.1;Parent=gene-PUW38_13000;Dbxref=NCBI_GP:WJG79764.1;Name=WJG79764.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=PUW38_13000;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WJG79764.1;transl_table=11 CP118116.1 Genbank gene 2648732 2649736 . - . ID=gene-PUW38_13005;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=PUW38_13005 CP118116.1 Protein Homology CDS 2648732 2649736 . - 0 ID=cds-WJG79765.1;Parent=gene-PUW38_13005;Dbxref=NCBI_GP:WJG79765.1;Name=WJG79765.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=PUW38_13005;product=cytoskeleton protein RodZ;protein_id=WJG79765.1;transl_table=11 CP118116.1 Genbank pseudogene 2650028 2651193 . - . ID=gene-PUW38_13010;Name=PUW38_13010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13010;pseudo=true CP118116.1 Protein Homology CDS 2650028 2651193 . - 0 ID=cds-PUW38_13010;Parent=gene-PUW38_13010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=PUW38_13010;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2651400 2651831 . - . ID=gene-PUW38_13015;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=PUW38_13015 CP118116.1 Protein Homology CDS 2651400 2651831 . - 0 ID=cds-WJG79766.1;Parent=gene-PUW38_13015;Dbxref=NCBI_GP:WJG79766.1;Name=WJG79766.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=PUW38_13015;product=nucleoside-diphosphate kinase;protein_id=WJG79766.1;transl_table=11 CP118116.1 Genbank gene 2651952 2652815 . - . ID=gene-PUW38_13020;Name=PUW38_13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13020 CP118116.1 Protein Homology CDS 2651952 2652815 . - 0 ID=cds-WJG79767.1;Parent=gene-PUW38_13020;Dbxref=NCBI_GP:WJG79767.1;Name=WJG79767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=PUW38_13020;product=4Fe-4S binding protein;protein_id=WJG79767.1;transl_table=11 CP118116.1 Genbank gene 2652815 2653624 . - . ID=gene-PUW38_13025;Name=PUW38_13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13025 CP118116.1 Protein Homology CDS 2652815 2653624 . - 0 ID=cds-WJG79768.1;Parent=gene-PUW38_13025;Dbxref=NCBI_GP:WJG79768.1;Name=WJG79768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=PUW38_13025;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WJG79768.1;transl_table=11 CP118116.1 Genbank gene 2653617 2654246 . - . ID=gene-PUW38_13030;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW38_13030 CP118116.1 Protein Homology CDS 2653617 2654246 . - 0 ID=cds-WJG79769.1;Parent=gene-PUW38_13030;Dbxref=NCBI_GP:WJG79769.1;Name=WJG79769.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=PUW38_13030;product=dimethylsulfoxide reductase subunit B;protein_id=WJG79769.1;transl_table=11 CP118116.1 Genbank gene 2654243 2656648 . - . ID=gene-PUW38_13035;Name=PUW38_13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13035 CP118116.1 Protein Homology CDS 2654243 2656648 . - 0 ID=cds-WJG79770.1;Parent=gene-PUW38_13035;Dbxref=NCBI_GP:WJG79770.1;Name=WJG79770.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=PUW38_13035;product=molybdopterin-dependent oxidoreductase;protein_id=WJG79770.1;transl_table=11 CP118116.1 Genbank gene 2656777 2659092 . - . ID=gene-PUW38_13040;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=PUW38_13040 CP118116.1 Protein Homology CDS 2656777 2659092 . - 0 ID=cds-WJG79771.1;Parent=gene-PUW38_13040;Dbxref=NCBI_GP:WJG79771.1;Name=WJG79771.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=PUW38_13040;product=peptidoglycan glycosyltransferase PbpC;protein_id=WJG79771.1;transl_table=11 CP118116.1 Genbank gene 2659093 2664027 . - . ID=gene-PUW38_13045;Name=PUW38_13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13045 CP118116.1 Protein Homology CDS 2659093 2664027 . - 0 ID=cds-WJG79772.1;Parent=gene-PUW38_13045;Dbxref=NCBI_GP:WJG79772.1;Name=WJG79772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=PUW38_13045;product=alpha-2-macroglobulin;protein_id=WJG79772.1;transl_table=11 CP118116.1 Genbank gene 2664236 2665078 . + . ID=gene-PUW38_13050;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PUW38_13050 CP118116.1 Protein Homology CDS 2664236 2665078 . + 0 ID=cds-WJG79773.1;Parent=gene-PUW38_13050;Dbxref=NCBI_GP:WJG79773.1;Name=WJG79773.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=PUW38_13050;product=3-mercaptopyruvate sulfurtransferase;protein_id=WJG79773.1;transl_table=11 CP118116.1 Genbank gene 2665058 2665282 . - . ID=gene-PUW38_13055;Name=PUW38_13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13055 CP118116.1 Protein Homology CDS 2665058 2665282 . - 0 ID=cds-WJG79774.1;Parent=gene-PUW38_13055;Dbxref=NCBI_GP:WJG79774.1;Name=WJG79774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=PUW38_13055;product=hypothetical protein;protein_id=WJG79774.1;transl_table=11 CP118116.1 Genbank gene 2665324 2665992 . + . ID=gene-PUW38_13060;Name=PUW38_13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13060 CP118116.1 Protein Homology CDS 2665324 2665992 . + 0 ID=cds-WJG79775.1;Parent=gene-PUW38_13060;Dbxref=NCBI_GP:WJG79775.1;Name=WJG79775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=PUW38_13060;product=DUF5066 family protein;protein_id=WJG79775.1;transl_table=11 CP118116.1 Genbank gene 2666407 2666523 . + . ID=gene-PUW38_13065;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=PUW38_13065 CP118116.1 Protein Homology CDS 2666407 2666523 . + 0 ID=cds-WJG79776.1;Parent=gene-PUW38_13065;Dbxref=NCBI_GP:WJG79776.1;Name=WJG79776.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=PUW38_13065;product=small toxic inner membrane protein TimP;protein_id=WJG79776.1;transl_table=11 CP118116.1 Genbank gene 2666560 2667336 . - . ID=gene-PUW38_13070;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=PUW38_13070 CP118116.1 Protein Homology CDS 2666560 2667336 . - 0 ID=cds-WJG79777.1;Parent=gene-PUW38_13070;Dbxref=NCBI_GP:WJG79777.1;Name=WJG79777.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=PUW38_13070;product=enhanced serine sensitivity protein SseB;protein_id=WJG79777.1;transl_table=11 CP118116.1 Genbank gene 2667446 2668729 . - . ID=gene-PUW38_13075;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=PUW38_13075 CP118116.1 Protein Homology CDS 2667446 2668729 . - 0 ID=cds-WJG79778.1;Parent=gene-PUW38_13075;Dbxref=NCBI_GP:WJG79778.1;Name=WJG79778.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=PUW38_13075;product=aminopeptidase PepB;protein_id=WJG79778.1;transl_table=11 CP118116.1 Genbank gene 2668907 2669107 . - . ID=gene-PUW38_13080;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=PUW38_13080 CP118116.1 Protein Homology CDS 2668907 2669107 . - 0 ID=cds-WJG79779.1;Parent=gene-PUW38_13080;Dbxref=NCBI_GP:WJG79779.1;Name=WJG79779.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=PUW38_13080;product=Fe-S cluster assembly protein IscX;protein_id=WJG79779.1;transl_table=11 CP118116.1 Genbank gene 2669119 2669454 . - . ID=gene-PUW38_13085;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=PUW38_13085 CP118116.1 Protein Homology CDS 2669119 2669454 . - 0 ID=cds-WJG79780.1;Parent=gene-PUW38_13085;Dbxref=NCBI_GP:WJG79780.1;Name=WJG79780.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=PUW38_13085;product=ISC system 2Fe-2S type ferredoxin;protein_id=WJG79780.1;transl_table=11 CP118116.1 Genbank gene 2669456 2671306 . - . ID=gene-PUW38_13090;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=PUW38_13090 CP118116.1 Protein Homology CDS 2669456 2671306 . - 0 ID=cds-WJG79781.1;Parent=gene-PUW38_13090;Dbxref=NCBI_GP:WJG79781.1;Name=WJG79781.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=PUW38_13090;product=Fe-S protein assembly chaperone HscA;protein_id=WJG79781.1;transl_table=11 CP118116.1 Genbank gene 2671319 2671834 . - . ID=gene-PUW38_13095;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=PUW38_13095 CP118116.1 Protein Homology CDS 2671319 2671834 . - 0 ID=cds-WJG79782.1;Parent=gene-PUW38_13095;Dbxref=NCBI_GP:WJG79782.1;Name=WJG79782.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=PUW38_13095;product=co-chaperone HscB;protein_id=WJG79782.1;transl_table=11 CP118116.1 Genbank gene 2672030 2672353 . - . ID=gene-PUW38_13100;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=PUW38_13100 CP118116.1 Protein Homology CDS 2672030 2672353 . - 0 ID=cds-WJG79783.1;Parent=gene-PUW38_13100;Dbxref=NCBI_GP:WJG79783.1;Name=WJG79783.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=PUW38_13100;product=iron-sulfur cluster assembly protein IscA;protein_id=WJG79783.1;transl_table=11 CP118116.1 Genbank pseudogene 2672382 2672767 . - . ID=gene-PUW38_13105;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=pseudogene;locus_tag=PUW38_13105;pseudo=true CP118116.1 Protein Homology CDS 2672382 2672767 . - 0 ID=cds-PUW38_13105;Parent=gene-PUW38_13105;Note=frameshifted;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=PUW38_13105;product=Fe-S cluster assembly scaffold IscU;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2672795 2674008 . - . ID=gene-PUW38_13110;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=pseudogene;locus_tag=PUW38_13110;pseudo=true CP118116.1 Protein Homology CDS 2672795 2674008 . - 0 ID=cds-PUW38_13110;Parent=gene-PUW38_13110;Note=frameshifted;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=PUW38_13110;product=cysteine desulfurase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2674189 2674683 . - . ID=gene-PUW38_13115;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=PUW38_13115 CP118116.1 Protein Homology CDS 2674189 2674683 . - 0 ID=cds-WJG79784.1;Parent=gene-PUW38_13115;Dbxref=NCBI_GP:WJG79784.1;Name=WJG79784.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=PUW38_13115;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WJG79784.1;transl_table=11 CP118116.1 Genbank gene 2674843 2675574 . - . ID=gene-PUW38_13120;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=PUW38_13120 CP118116.1 Protein Homology CDS 2674843 2675574 . - 0 ID=cds-WJG79785.1;Parent=gene-PUW38_13120;Dbxref=NCBI_GP:WJG79785.1;Name=WJG79785.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=PUW38_13120;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WJG79785.1;transl_table=11 CP118116.1 Genbank gene 2675693 2676496 . + . ID=gene-PUW38_13125;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=PUW38_13125 CP118116.1 Protein Homology CDS 2675693 2676496 . + 0 ID=cds-WJG79786.1;Parent=gene-PUW38_13125;Dbxref=NCBI_GP:WJG79786.1;Name=WJG79786.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=PUW38_13125;product=inositol-1-monophosphatase;protein_id=WJG79786.1;transl_table=11 CP118116.1 Genbank gene 2676641 2677519 . + . ID=gene-PUW38_13130;Name=PUW38_13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13130 CP118116.1 Protein Homology CDS 2676641 2677519 . + 0 ID=cds-WJG79787.1;Parent=gene-PUW38_13130;Dbxref=NCBI_GP:WJG79787.1;Name=WJG79787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=PUW38_13130;product=alpha/beta hydrolase;protein_id=WJG79787.1;transl_table=11 CP118116.1 Genbank pseudogene 2677701 2678745 . + . ID=gene-PUW38_13135;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=pseudogene;locus_tag=PUW38_13135;pseudo=true CP118116.1 Protein Homology CDS 2677701 2678745 . + 0 ID=cds-PUW38_13135;Parent=gene-PUW38_13135;Note=frameshifted;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=PUW38_13135;product=anaerobic sulfite reductase subunit AsrA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2678749 2679567 . + . ID=gene-PUW38_13140;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=PUW38_13140 CP118116.1 Protein Homology CDS 2678749 2679567 . + 0 ID=cds-WJG79788.1;Parent=gene-PUW38_13140;Dbxref=NCBI_GP:WJG79788.1;Name=WJG79788.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=PUW38_13140;product=anaerobic sulfite reductase subunit AsrB;protein_id=WJG79788.1;transl_table=11 CP118116.1 Genbank gene 2679578 2680591 . + . ID=gene-PUW38_13145;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=PUW38_13145 CP118116.1 Protein Homology CDS 2679578 2680591 . + 0 ID=cds-WJG79789.1;Parent=gene-PUW38_13145;Dbxref=NCBI_GP:WJG79789.1;Name=WJG79789.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=PUW38_13145;product=sulfite reductase subunit C;protein_id=WJG79789.1;transl_table=11 CP118116.1 Genbank pseudogene 2680592 2681577 . - . ID=gene-PUW38_13150;Name=PUW38_13150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13150;pseudo=true CP118116.1 Protein Homology CDS 2680592 2681577 . - 0 ID=cds-PUW38_13150;Parent=gene-PUW38_13150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=PUW38_13150;product=nickel/cobalt transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2681568 2682206 . - . ID=gene-PUW38_13155;Name=PUW38_13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13155 CP118116.1 Protein Homology CDS 2681568 2682206 . - 0 ID=cds-WJG83243.1;Parent=gene-PUW38_13155;Dbxref=NCBI_GP:WJG83243.1;Name=WJG83243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=PUW38_13155;product=DUF1007 family protein;protein_id=WJG83243.1;transl_table=11 CP118116.1 Genbank gene 2682332 2683609 . + . ID=gene-PUW38_13160;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=PUW38_13160 CP118116.1 Protein Homology CDS 2682332 2683609 . + 0 ID=cds-WJG79790.1;Parent=gene-PUW38_13160;Dbxref=NCBI_GP:WJG79790.1;Name=WJG79790.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=PUW38_13160;product=stationary phase inducible protein CsiE;protein_id=WJG79790.1;transl_table=11 CP118116.1 Genbank gene 2683604 2684743 . - . ID=gene-PUW38_13165;Name=PUW38_13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13165 CP118116.1 Protein Homology CDS 2683604 2684743 . - 0 ID=cds-WJG79791.1;Parent=gene-PUW38_13165;Dbxref=NCBI_GP:WJG79791.1;Name=WJG79791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=PUW38_13165;product=3-phenylpropionate MFS transporter;protein_id=WJG79791.1;transl_table=11 CP118116.1 Genbank gene 2684939 2686192 . - . ID=gene-PUW38_13170;Name=PUW38_13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13170 CP118116.1 Protein Homology CDS 2684939 2686192 . - 0 ID=cds-WJG79792.1;Parent=gene-PUW38_13170;Dbxref=NCBI_GP:WJG79792.1;Name=WJG79792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=PUW38_13170;product=serine hydroxymethyltransferase;protein_id=WJG79792.1;transl_table=11 CP118116.1 Genbank gene 2686517 2687707 . + . ID=gene-PUW38_13175;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=PUW38_13175 CP118116.1 Protein Homology CDS 2686517 2687707 . + 0 ID=cds-WJG79793.1;Parent=gene-PUW38_13175;Dbxref=NCBI_GP:WJG79793.1;Name=WJG79793.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=PUW38_13175;product=NO-inducible flavohemoprotein;protein_id=WJG79793.1;transl_table=11 CP118116.1 Genbank gene 2687889 2689430 . + . ID=gene-PUW38_13180;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=PUW38_13180 CP118116.1 Protein Homology CDS 2687889 2689430 . + 0 ID=cds-WJG79794.1;Parent=gene-PUW38_13180;Dbxref=NCBI_GP:WJG79794.1;Name=WJG79794.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=PUW38_13180;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WJG79794.1;transl_table=11 CP118116.1 Genbank gene 2689791 2691122 . + . ID=gene-PUW38_13185;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=PUW38_13185 CP118116.1 Protein Homology CDS 2689791 2691122 . + 0 ID=cds-WJG79795.1;Parent=gene-PUW38_13185;Dbxref=NCBI_GP:WJG79795.1;Name=WJG79795.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=PUW38_13185;product=cadaverine/lysine antiporter;protein_id=WJG79795.1;transl_table=11 CP118116.1 Genbank gene 2691205 2693349 . + . ID=gene-PUW38_13190;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=PUW38_13190 CP118116.1 Protein Homology CDS 2691205 2693349 . + 0 ID=cds-WJG79796.1;Parent=gene-PUW38_13190;Dbxref=NCBI_GP:WJG79796.1;Name=WJG79796.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=PUW38_13190;product=lysine decarboxylase CadA;protein_id=WJG79796.1;transl_table=11 CP118116.1 Genbank pseudogene 2693405 2694863 . + . ID=gene-PUW38_13195;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=pseudogene;locus_tag=PUW38_13195;pseudo=true CP118116.1 Protein Homology CDS 2693405 2694863 . + 0 ID=cds-PUW38_13195;Parent=gene-PUW38_13195;Note=frameshifted;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=PUW38_13195;product=dipeptide permease DtpD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2694912 2695250 . - . ID=gene-PUW38_13200;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=PUW38_13200 CP118116.1 Protein Homology CDS 2694912 2695250 . - 0 ID=cds-WJG79797.1;Parent=gene-PUW38_13200;Dbxref=NCBI_GP:WJG79797.1;Name=WJG79797.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=PUW38_13200;product=nitrogen regulatory protein P-II;protein_id=WJG79797.1;transl_table=11 CP118116.1 Genbank gene 2695327 2696664 . - . ID=gene-PUW38_13205;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=PUW38_13205 CP118116.1 Protein Homology CDS 2695327 2696664 . - 0 ID=cds-WJG79798.1;Parent=gene-PUW38_13205;Dbxref=NCBI_GP:WJG79798.1;Name=WJG79798.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=PUW38_13205;product=two-component system response regulator GlrR;protein_id=WJG79798.1;transl_table=11 CP118116.1 Genbank gene 2696661 2697425 . - . ID=gene-PUW38_13210;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=PUW38_13210 CP118116.1 Protein Homology CDS 2696661 2697425 . - 0 ID=cds-WJG79799.1;Parent=gene-PUW38_13210;Dbxref=NCBI_GP:WJG79799.1;Name=WJG79799.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=PUW38_13210;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WJG79799.1;transl_table=11 CP118116.1 Genbank gene 2697427 2698857 . - . ID=gene-PUW38_13215;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=PUW38_13215 CP118116.1 Protein Homology CDS 2697427 2698857 . - 0 ID=cds-WJG79800.1;Parent=gene-PUW38_13215;Dbxref=NCBI_GP:WJG79800.1;Name=WJG79800.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=PUW38_13215;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WJG79800.1;transl_table=11 CP118116.1 Genbank gene 2699507 2703394 . - . ID=gene-PUW38_13220;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=PUW38_13220 CP118116.1 Protein Homology CDS 2699507 2703394 . - 0 ID=cds-WJG79801.1;Parent=gene-PUW38_13220;Dbxref=NCBI_GP:WJG79801.1;Name=WJG79801.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=PUW38_13220;product=phosphoribosylformylglycinamidine synthase;protein_id=WJG79801.1;transl_table=11 CP118116.1 Genbank gene 2703416 2703649 . + . ID=gene-PUW38_13225;Name=PUW38_13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13225 CP118116.1 Protein Homology CDS 2703416 2703649 . + 0 ID=cds-WJG79802.1;Parent=gene-PUW38_13225;Dbxref=NCBI_GP:WJG79802.1;Name=WJG79802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=PUW38_13225;product=hypothetical protein;protein_id=WJG79802.1;transl_table=11 CP118116.1 Genbank gene 2703650 2705194 . + . ID=gene-PUW38_13230;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=PUW38_13230 CP118116.1 Protein Homology CDS 2703650 2705194 . + 0 ID=cds-WJG79803.1;Parent=gene-PUW38_13230;Dbxref=NCBI_GP:WJG79803.1;Name=WJG79803.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=PUW38_13230;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WJG79803.1;transl_table=11 CP118116.1 Genbank gene 2705245 2705796 . - . ID=gene-PUW38_13235;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=PUW38_13235 CP118116.1 Protein Homology CDS 2705245 2705796 . - 0 ID=cds-WJG79804.1;Parent=gene-PUW38_13235;Dbxref=NCBI_GP:WJG79804.1;Name=WJG79804.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=PUW38_13235;product=tRNA adenosine(34) deaminase TadA;protein_id=WJG79804.1;transl_table=11 CP118116.1 Genbank gene 2705821 2706456 . - . ID=gene-PUW38_13240;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=PUW38_13240 CP118116.1 Protein Homology CDS 2705821 2706456 . - 0 ID=cds-WJG79805.1;Parent=gene-PUW38_13240;Dbxref=NCBI_GP:WJG79805.1;Name=WJG79805.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=PUW38_13240;product=phosphatidylglycerophosphatase C;protein_id=WJG79805.1;transl_table=11 CP118116.1 Genbank gene 2706460 2707821 . - . ID=gene-PUW38_13245;Name=PUW38_13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13245 CP118116.1 Protein Homology CDS 2706460 2707821 . - 0 ID=cds-WJG79806.1;Parent=gene-PUW38_13245;Dbxref=NCBI_GP:WJG79806.1;Name=WJG79806.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=PUW38_13245;product=PTS transporter subunit EIIC;protein_id=WJG79806.1;transl_table=11 CP118116.1 Genbank gene 2707832 2708725 . - . ID=gene-PUW38_13250;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=PUW38_13250 CP118116.1 Protein Homology CDS 2707832 2708725 . - 0 ID=cds-WJG79807.1;Parent=gene-PUW38_13250;Dbxref=NCBI_GP:WJG79807.1;Name=WJG79807.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=PUW38_13250;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WJG79807.1;transl_table=11 CP118116.1 Genbank gene 2708841 2709689 . + . ID=gene-PUW38_13255;Name=PUW38_13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13255 CP118116.1 Protein Homology CDS 2708841 2709689 . + 0 ID=cds-WJG79808.1;Parent=gene-PUW38_13255;Dbxref=NCBI_GP:WJG79808.1;Name=WJG79808.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=PUW38_13255;product=MurR/RpiR family transcriptional regulator;protein_id=WJG79808.1;transl_table=11 CP118116.1 Genbank pseudogene 2709728 2710644 . - . ID=gene-PUW38_13260;Name=PUW38_13260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13260;pseudo=true CP118116.1 Protein Homology CDS 2709728 2710644 . - 0 ID=cds-PUW38_13260;Parent=gene-PUW38_13260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=PUW38_13260;product=oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2710666 2711861 . - . ID=gene-PUW38_13265;Name=PUW38_13265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13265;pseudo=true CP118116.1 Protein Homology CDS 2710666 2711861 . - 0 ID=cds-PUW38_13265;Parent=gene-PUW38_13265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=PUW38_13265;product=OFA family MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2711977 2712903 . + . ID=gene-PUW38_13270;Name=PUW38_13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13270 CP118116.1 Protein Homology CDS 2711977 2712903 . + 0 ID=cds-WJG79809.1;Parent=gene-PUW38_13270;Dbxref=NCBI_GP:WJG79809.1;Name=WJG79809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=PUW38_13270;product=LysR family transcriptional regulator;protein_id=WJG79809.1;transl_table=11 CP118116.1 Genbank gene 2712941 2713201 . + . ID=gene-PUW38_13275;Name=PUW38_13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13275 CP118116.1 Protein Homology CDS 2712941 2713201 . + 0 ID=cds-WJG79810.1;Parent=gene-PUW38_13275;Dbxref=NCBI_GP:WJG79810.1;Name=WJG79810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=PUW38_13275;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WJG79810.1;transl_table=11 CP118116.1 Genbank gene 2713313 2713693 . - . ID=gene-PUW38_13280;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=PUW38_13280 CP118116.1 Protein Homology CDS 2713313 2713693 . - 0 ID=cds-WJG79811.1;Parent=gene-PUW38_13280;Dbxref=NCBI_GP:WJG79811.1;Name=WJG79811.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=PUW38_13280;product=holo-ACP synthase;protein_id=WJG79811.1;transl_table=11 CP118116.1 Genbank gene 2713693 2714424 . - . ID=gene-PUW38_13285;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=PUW38_13285 CP118116.1 Protein Homology CDS 2713693 2714424 . - 0 ID=cds-WJG79812.1;Parent=gene-PUW38_13285;Dbxref=NCBI_GP:WJG79812.1;Name=WJG79812.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=PUW38_13285;product=pyridoxine 5'-phosphate synthase;protein_id=WJG79812.1;transl_table=11 CP118116.1 Genbank gene 2714436 2715164 . - . ID=gene-PUW38_13290;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=PUW38_13290 CP118116.1 Protein Homology CDS 2714436 2715164 . - 0 ID=cds-WJG79813.1;Parent=gene-PUW38_13290;Dbxref=NCBI_GP:WJG79813.1;Name=WJG79813.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=PUW38_13290;product=DNA repair protein RecO;protein_id=WJG79813.1;transl_table=11 CP118116.1 Genbank pseudogene 2715176 2716080 . - . ID=gene-PUW38_13295;Name=era;gbkey=Gene;gene=era;gene_biotype=pseudogene;locus_tag=PUW38_13295;pseudo=true CP118116.1 Protein Homology CDS 2715176 2716080 . - 0 ID=cds-PUW38_13295;Parent=gene-PUW38_13295;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=PUW38_13295;product=GTPase Era;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2716077 2716757 . - . ID=gene-PUW38_13300;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=PUW38_13300 CP118116.1 Protein Homology CDS 2716077 2716757 . - 0 ID=cds-WJG83244.1;Parent=gene-PUW38_13300;Dbxref=NCBI_GP:WJG83244.1;Name=WJG83244.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=PUW38_13300;product=ribonuclease III;protein_id=WJG83244.1;transl_table=11 CP118116.1 Genbank gene 2717031 2718005 . - . ID=gene-PUW38_13305;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PUW38_13305 CP118116.1 Protein Homology CDS 2717031 2718005 . - 0 ID=cds-WJG79814.1;Parent=gene-PUW38_13305;Dbxref=NCBI_GP:WJG79814.1;Name=WJG79814.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=PUW38_13305;product=signal peptidase I;protein_id=WJG79814.1;transl_table=11 CP118116.1 Genbank gene 2718022 2719821 . - . ID=gene-PUW38_13310;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=PUW38_13310 CP118116.1 Protein Homology CDS 2718022 2719821 . - 0 ID=cds-WJG79815.1;Parent=gene-PUW38_13310;Dbxref=NCBI_GP:WJG79815.1;Name=WJG79815.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=PUW38_13310;product=translation elongation factor 4;protein_id=WJG79815.1;transl_table=11 CP118116.1 Genbank gene 2720072 2720551 . - . ID=gene-PUW38_13315;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=PUW38_13315 CP118116.1 Protein Homology CDS 2720072 2720551 . - 0 ID=cds-WJG79816.1;Parent=gene-PUW38_13315;Dbxref=NCBI_GP:WJG79816.1;Name=WJG79816.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=PUW38_13315;product=SoxR-reducing system protein RseC;protein_id=WJG79816.1;transl_table=11 CP118116.1 Genbank gene 2720548 2721504 . - . ID=gene-PUW38_13320;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=PUW38_13320 CP118116.1 Protein Homology CDS 2720548 2721504 . - 0 ID=cds-WJG79817.1;Parent=gene-PUW38_13320;Dbxref=NCBI_GP:WJG79817.1;Name=WJG79817.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=PUW38_13320;product=sigma-E factor regulatory protein RseB;protein_id=WJG79817.1;transl_table=11 CP118116.1 Genbank gene 2721504 2722154 . - . ID=gene-PUW38_13325;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=PUW38_13325 CP118116.1 Protein Homology CDS 2721504 2722154 . - 0 ID=cds-WJG79818.1;Parent=gene-PUW38_13325;Dbxref=NCBI_GP:WJG79818.1;Name=WJG79818.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=PUW38_13325;product=anti-sigma-E factor RseA;protein_id=WJG79818.1;transl_table=11 CP118116.1 Genbank gene 2722186 2722761 . - . ID=gene-PUW38_13330;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=PUW38_13330 CP118116.1 Protein Homology CDS 2722186 2722761 . - 0 ID=cds-WJG79819.1;Parent=gene-PUW38_13330;Dbxref=NCBI_GP:WJG79819.1;Name=WJG79819.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=PUW38_13330;product=RNA polymerase sigma factor RpoE;protein_id=WJG79819.1;transl_table=11 CP118116.1 Genbank gene 2722758 2722922 . - . ID=gene-PUW38_13335;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=PUW38_13335 CP118116.1 Protein Homology CDS 2722758 2722922 . - 0 ID=cds-WJG79820.1;Parent=gene-PUW38_13335;Dbxref=NCBI_GP:WJG79820.1;Name=WJG79820.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=PUW38_13335;product=rpoE leader peptide RseD;protein_id=WJG79820.1;transl_table=11 CP118116.1 Genbank gene 2723186 2724808 . + . ID=gene-PUW38_13340;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=PUW38_13340 CP118116.1 Protein Homology CDS 2723186 2724808 . + 0 ID=cds-WJG79821.1;Parent=gene-PUW38_13340;Dbxref=NCBI_GP:WJG79821.1;Name=WJG79821.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=PUW38_13340;product=L-aspartate oxidase;protein_id=WJG79821.1;transl_table=11 CP118116.1 Genbank gene 2724793 2725530 . - . ID=gene-PUW38_13345;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=PUW38_13345 CP118116.1 Protein Homology CDS 2724793 2725530 . - 0 ID=cds-WJG79822.1;Parent=gene-PUW38_13345;Dbxref=NCBI_GP:WJG79822.1;Name=WJG79822.1;gbkey=CDS;gene=trmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=PUW38_13345;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WJG79822.1;transl_table=11 CP118116.1 Genbank gene 2725660 2726994 . + . ID=gene-PUW38_13350;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=PUW38_13350 CP118116.1 Protein Homology CDS 2725660 2726994 . + 0 ID=cds-WJG79823.1;Parent=gene-PUW38_13350;Dbxref=NCBI_GP:WJG79823.1;Name=WJG79823.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=PUW38_13350;product=ATP-dependent RNA helicase SrmB;protein_id=WJG79823.1;transl_table=11 CP118116.1 Genbank gene 2727012 2727911 . - . ID=gene-PUW38_13355;Name=PUW38_13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13355 CP118116.1 Protein Homology CDS 2727012 2727911 . - 0 ID=cds-WJG79824.1;Parent=gene-PUW38_13355;Dbxref=NCBI_GP:WJG79824.1;Name=WJG79824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=PUW38_13355;product=LysR family transcriptional regulator;protein_id=WJG79824.1;transl_table=11 CP118116.1 Genbank gene 2728014 2728601 . + . ID=gene-PUW38_13360;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=PUW38_13360 CP118116.1 Protein Homology CDS 2728014 2728601 . + 0 ID=cds-WJG79825.1;Parent=gene-PUW38_13360;Dbxref=NCBI_GP:WJG79825.1;Name=WJG79825.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=PUW38_13360;product=cysteine/O-acetylserine transporter;protein_id=WJG79825.1;transl_table=11 CP118116.1 Genbank gene 2728663 2729046 . - . ID=gene-PUW38_13365;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=PUW38_13365 CP118116.1 Protein Homology CDS 2728663 2729046 . - 0 ID=cds-WJG79826.1;Parent=gene-PUW38_13365;Dbxref=NCBI_GP:WJG79826.1;Name=WJG79826.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=PUW38_13365;product=autonomous glycyl radical cofactor GrcA;protein_id=WJG79826.1;transl_table=11 CP118116.1 Genbank gene 2729365 2730054 . + . ID=gene-PUW38_13370;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=PUW38_13370 CP118116.1 Protein Homology CDS 2729365 2730054 . + 0 ID=cds-WJG79827.1;Parent=gene-PUW38_13370;Dbxref=NCBI_GP:WJG79827.1;Name=WJG79827.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=PUW38_13370;product=uracil-DNA glycosylase;protein_id=WJG79827.1;transl_table=11 CP118116.1 Genbank gene 2730170 2731207 . - . ID=gene-PUW38_13375;Name=PUW38_13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13375 CP118116.1 Protein Homology CDS 2730170 2731207 . - 0 ID=cds-WJG79828.1;Parent=gene-PUW38_13375;Dbxref=NCBI_GP:WJG79828.1;Name=WJG79828.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=PUW38_13375;product=tRNA/rRNA methyltransferase;protein_id=WJG79828.1;transl_table=11 CP118116.1 Genbank gene 2731411 2731830 . + . ID=gene-PUW38_13380;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=PUW38_13380 CP118116.1 Protein Homology CDS 2731411 2731830 . + 0 ID=cds-WJG79829.1;Parent=gene-PUW38_13380;Dbxref=NCBI_GP:WJG79829.1;Name=WJG79829.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=PUW38_13380;product=thioredoxin TrxC;protein_id=WJG79829.1;transl_table=11 CP118116.1 Genbank pseudogene 2731903 2732582 . + . ID=gene-PUW38_13385;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=pseudogene;gene_synonym=tuaA,yfiP;locus_tag=PUW38_13385;pseudo=true CP118116.1 Protein Homology CDS 2731903 2732582 . + 0 ID=cds-PUW38_13385;Parent=gene-PUW38_13385;Note=frameshifted;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=PUW38_13385;product=tRNA-uridine aminocarboxypropyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2732636 2735296 . + . ID=gene-PUW38_13390;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=PUW38_13390 CP118116.1 Protein Homology CDS 2732636 2735296 . + 0 ID=cds-WJG79830.1;Parent=gene-PUW38_13390;Dbxref=NCBI_GP:WJG79830.1;Name=WJG79830.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=PUW38_13390;product=protein lysine acetyltransferase;protein_id=WJG79830.1;transl_table=11 CP118116.1 Genbank pseudogene 2735386 2735427 . + . ID=gene-PUW38_13395;Name=PUW38_13395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13395;pseudo=true CP118116.1 Protein Homology CDS 2735386 2735427 . + 0 ID=cds-PUW38_13395;Parent=gene-PUW38_13395;Note=too short;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051192.1;locus_tag=PUW38_13395;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2735411 2736765 . + . ID=gene-PUW38_13400;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=pseudogene;locus_tag=PUW38_13400;pseudo=true CP118116.1 Protein Homology CDS 2735411 2736765 . + 0 ID=cds-PUW38_13400;Parent=gene-PUW38_13400;Note=frameshifted;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=PUW38_13400;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2736810 2737133 . + . ID=gene-PUW38_13405;Name=PUW38_13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13405 CP118116.1 Protein Homology CDS 2736810 2737133 . + 0 ID=cds-WJG79831.1;Parent=gene-PUW38_13405;Dbxref=NCBI_GP:WJG79831.1;Name=WJG79831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=PUW38_13405;product=YfiM family lipoprotein;protein_id=WJG79831.1;transl_table=11 CP118116.1 Genbank gene 2737130 2738431 . - . ID=gene-PUW38_13410;Name=PUW38_13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13410 CP118116.1 Protein Homology CDS 2737130 2738431 . - 0 ID=cds-WJG79832.1;Parent=gene-PUW38_13410;Dbxref=NCBI_GP:WJG79832.1;Name=WJG79832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=PUW38_13410;product=MFS transporter;protein_id=WJG79832.1;transl_table=11 CP118116.1 Genbank gene 2738535 2738990 . - . ID=gene-PUW38_13415;Name=PUW38_13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13415 CP118116.1 Protein Homology CDS 2738535 2738990 . - 0 ID=cds-WJG79833.1;Parent=gene-PUW38_13415;Dbxref=NCBI_GP:WJG79833.1;Name=WJG79833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=PUW38_13415;product=DUF4385 domain-containing protein;protein_id=WJG79833.1;transl_table=11 CP118116.1 Genbank gene 2739182 2739297 . - . ID=gene-PUW38_13420;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW38_13420 CP118116.1 cmsearch rRNA 2739182 2739297 . - . ID=rna-PUW38_13420;Parent=gene-PUW38_13420;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_13420;product=5S ribosomal RNA CP118116.1 cmsearch exon 2739182 2739297 . - . ID=exon-PUW38_13420-1;Parent=rna-PUW38_13420;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_13420;product=5S ribosomal RNA CP118116.1 Genbank gene 2739494 2742482 . - . ID=gene-PUW38_13425;Name=PUW38_13425;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_13425 CP118116.1 cmsearch rRNA 2739494 2742482 . - . ID=rna-PUW38_13425;Parent=gene-PUW38_13425;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_13425;product=23S ribosomal RNA CP118116.1 cmsearch exon 2739494 2742482 . - . ID=exon-PUW38_13425-1;Parent=rna-PUW38_13425;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_13425;product=23S ribosomal RNA CP118116.1 Genbank gene 2742676 2742751 . - . ID=gene-PUW38_13430;Name=PUW38_13430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_13430 CP118116.1 tRNAscan-SE tRNA 2742676 2742751 . - . ID=rna-PUW38_13430;Parent=gene-PUW38_13430;anticodon=(pos:complement(2742715..2742717));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13430;product=tRNA-Glu CP118116.1 tRNAscan-SE exon 2742676 2742751 . - . ID=exon-PUW38_13430-1;Parent=rna-PUW38_13430;anticodon=(pos:complement(2742715..2742717));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13430;product=tRNA-Glu CP118116.1 Genbank gene 2742837 2744378 . - . ID=gene-PUW38_13435;Name=PUW38_13435;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_13435 CP118116.1 cmsearch rRNA 2742837 2744378 . - . ID=rna-PUW38_13435;Parent=gene-PUW38_13435;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_13435;product=16S ribosomal RNA CP118116.1 cmsearch exon 2742837 2744378 . - . ID=exon-PUW38_13435-1;Parent=rna-PUW38_13435;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_13435;product=16S ribosomal RNA CP118116.1 Genbank gene 2744831 2747404 . - . ID=gene-PUW38_13440;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=PUW38_13440 CP118116.1 Protein Homology CDS 2744831 2747404 . - 0 ID=cds-WJG79834.1;Parent=gene-PUW38_13440;Dbxref=NCBI_GP:WJG79834.1;Name=WJG79834.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=PUW38_13440;product=ATP-dependent chaperone ClpB;protein_id=WJG79834.1;transl_table=11 CP118116.1 Genbank gene 2747534 2748265 . - . ID=gene-PUW38_13445;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=PUW38_13445 CP118116.1 Protein Homology CDS 2747534 2748265 . - 0 ID=cds-WJG79835.1;Parent=gene-PUW38_13445;Dbxref=NCBI_GP:WJG79835.1;Name=WJG79835.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=PUW38_13445;product=purine nucleoside phosphorylase YfiH;protein_id=WJG79835.1;transl_table=11 CP118116.1 Genbank gene 2748262 2749242 . - . ID=gene-PUW38_13450;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=PUW38_13450 CP118116.1 Protein Homology CDS 2748262 2749242 . - 0 ID=cds-WJG79836.1;Parent=gene-PUW38_13450;Dbxref=NCBI_GP:WJG79836.1;Name=WJG79836.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=PUW38_13450;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WJG79836.1;transl_table=11 CP118116.1 Genbank gene 2749374 2750111 . + . ID=gene-PUW38_13455;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=PUW38_13455 CP118116.1 Protein Homology CDS 2749374 2750111 . + 0 ID=cds-WJG79837.1;Parent=gene-PUW38_13455;Dbxref=NCBI_GP:WJG79837.1;Name=WJG79837.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=PUW38_13455;product=outer membrane protein assembly factor BamD;protein_id=WJG79837.1;transl_table=11 CP118116.1 Genbank gene 2750383 2750721 . + . ID=gene-PUW38_13460;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=PUW38_13460 CP118116.1 Protein Homology CDS 2750383 2750721 . + 0 ID=cds-WJG79838.1;Parent=gene-PUW38_13460;Dbxref=NCBI_GP:WJG79838.1;Name=WJG79838.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=PUW38_13460;product=ribosome-associated translation inhibitor RaiA;protein_id=WJG79838.1;transl_table=11 CP118116.1 cmsearch sequence_feature 2750824 2750949 . + . ID=id-CP118116.1:2750824..2750949;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118116.1 Genbank gene 2750825 2750872 . + . ID=gene-PUW38_13465;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=PUW38_13465 CP118116.1 Protein Homology CDS 2750825 2750872 . + 0 ID=cds-WJG83245.1;Parent=gene-PUW38_13465;Dbxref=NCBI_GP:WJG83245.1;Name=WJG83245.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=PUW38_13465;product=pheA operon leader peptide PheL;protein_id=WJG83245.1;transl_table=11 CP118116.1 Genbank gene 2750972 2752132 . + . ID=gene-PUW38_13470;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=PUW38_13470 CP118116.1 Protein Homology CDS 2750972 2752132 . + 0 ID=cds-WJG79839.1;Parent=gene-PUW38_13470;Dbxref=NCBI_GP:WJG79839.1;Name=WJG79839.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=PUW38_13470;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WJG79839.1;transl_table=11 CP118116.1 Genbank gene 2752093 2753001 . - . ID=gene-PUW38_13475;Name=PUW38_13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13475 CP118116.1 Protein Homology CDS 2752093 2753001 . - 0 ID=cds-WJG79840.1;Parent=gene-PUW38_13475;Dbxref=NCBI_GP:WJG79840.1;Name=WJG79840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=PUW38_13475;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WJG79840.1;transl_table=11 CP118116.1 Genbank gene 2753059 2754180 . - . ID=gene-PUW38_13480;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=PUW38_13480 CP118116.1 Protein Homology CDS 2753059 2754180 . - 0 ID=cds-WJG79841.1;Parent=gene-PUW38_13480;Dbxref=NCBI_GP:WJG79841.1;Name=WJG79841.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=PUW38_13480;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WJG79841.1;transl_table=11 CP118116.1 Genbank gene 2754190 2755260 . - . ID=gene-PUW38_13485;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=PUW38_13485 CP118116.1 Protein Homology CDS 2754190 2755260 . - 0 ID=cds-WJG79842.1;Parent=gene-PUW38_13485;Dbxref=NCBI_GP:WJG79842.1;Name=WJG79842.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=PUW38_13485;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WJG79842.1;transl_table=11 CP118116.1 Genbank gene 2755700 2756218 . + . ID=gene-PUW38_13490;Name=PUW38_13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13490 CP118116.1 Protein Homology CDS 2755700 2756218 . + 0 ID=cds-WJG79843.1;Parent=gene-PUW38_13490;Dbxref=NCBI_GP:WJG79843.1;Name=WJG79843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=PUW38_13490;product=YfiR family protein;protein_id=WJG79843.1;transl_table=11 CP118116.1 Genbank gene 2756211 2757431 . + . ID=gene-PUW38_13495;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=PUW38_13495 CP118116.1 Protein Homology CDS 2756211 2757431 . + 0 ID=cds-WJG79844.1;Parent=gene-PUW38_13495;Dbxref=NCBI_GP:WJG79844.1;Name=WJG79844.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=PUW38_13495;product=diguanylate cyclase DgcN;protein_id=WJG79844.1;transl_table=11 CP118116.1 Genbank gene 2757588 2757935 . - . ID=gene-PUW38_13500;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=PUW38_13500 CP118116.1 Protein Homology CDS 2757588 2757935 . - 0 ID=cds-WJG79845.1;Parent=gene-PUW38_13500;Dbxref=NCBI_GP:WJG79845.1;Name=WJG79845.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=PUW38_13500;product=50S ribosomal protein L19;protein_id=WJG79845.1;transl_table=11 CP118116.1 Genbank gene 2757976 2758743 . - . ID=gene-PUW38_13505;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=PUW38_13505 CP118116.1 Protein Homology CDS 2757976 2758743 . - 0 ID=cds-WJG79846.1;Parent=gene-PUW38_13505;Dbxref=NCBI_GP:WJG79846.1;Name=WJG79846.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=PUW38_13505;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WJG79846.1;transl_table=11 CP118116.1 Genbank gene 2758788 2759336 . - . ID=gene-PUW38_13510;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=PUW38_13510 CP118116.1 Protein Homology CDS 2758788 2759336 . - 0 ID=cds-WJG83246.1;Parent=gene-PUW38_13510;Dbxref=NCBI_GP:WJG83246.1;Name=WJG83246.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=PUW38_13510;product=ribosome maturation factor RimM;protein_id=WJG83246.1;transl_table=11 CP118116.1 Genbank gene 2759355 2759603 . - . ID=gene-PUW38_13515;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=PUW38_13515 CP118116.1 Protein Homology CDS 2759355 2759603 . - 0 ID=cds-WJG79847.1;Parent=gene-PUW38_13515;Dbxref=NCBI_GP:WJG79847.1;Name=WJG79847.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=PUW38_13515;product=30S ribosomal protein S16;protein_id=WJG79847.1;transl_table=11 CP118116.1 Genbank gene 2759856 2761217 . - . ID=gene-PUW38_13520;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=PUW38_13520 CP118116.1 Protein Homology CDS 2759856 2761217 . - 0 ID=cds-WJG79848.1;Parent=gene-PUW38_13520;Dbxref=NCBI_GP:WJG79848.1;Name=WJG79848.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=PUW38_13520;product=signal recognition particle protein;protein_id=WJG79848.1;transl_table=11 CP118116.1 Genbank gene 2761383 2762174 . + . ID=gene-PUW38_13525;Name=PUW38_13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13525 CP118116.1 Protein Homology CDS 2761383 2762174 . + 0 ID=cds-WJG79849.1;Parent=gene-PUW38_13525;Dbxref=NCBI_GP:WJG79849.1;Name=WJG79849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=PUW38_13525;product=inner membrane protein YpjD;protein_id=WJG79849.1;transl_table=11 CP118116.1 Genbank gene 2762194 2763480 . + . ID=gene-PUW38_13530;Name=PUW38_13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13530 CP118116.1 Protein Homology CDS 2762194 2763480 . + 0 ID=cds-WJG83247.1;Parent=gene-PUW38_13530;Dbxref=NCBI_GP:WJG83247.1;Name=WJG83247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=PUW38_13530;product=HlyC/CorC family transporter;protein_id=WJG83247.1;transl_table=11 CP118116.1 Genbank gene 2763601 2764206 . + . ID=gene-PUW38_13535;Name=PUW38_13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13535 CP118116.1 Protein Homology CDS 2763601 2764206 . + 0 ID=cds-WJG79850.1;Parent=gene-PUW38_13535;Dbxref=NCBI_GP:WJG79850.1;Name=WJG79850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=PUW38_13535;product=cytoplasmic protein;protein_id=WJG79850.1;transl_table=11 CP118116.1 Genbank gene 2764241 2764831 . - . ID=gene-PUW38_13540;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=PUW38_13540 CP118116.1 Protein Homology CDS 2764241 2764831 . - 0 ID=cds-WJG79851.1;Parent=gene-PUW38_13540;Dbxref=NCBI_GP:WJG79851.1;Name=WJG79851.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=PUW38_13540;product=nucleotide exchange factor GrpE;protein_id=WJG79851.1;transl_table=11 CP118116.1 Genbank pseudogene 2764955 2765832 . + . ID=gene-PUW38_13545;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=pseudogene;locus_tag=PUW38_13545;pseudo=true CP118116.1 Protein Homology CDS 2764955 2765832 . + 0 ID=cds-PUW38_13545;Parent=gene-PUW38_13545;Note=frameshifted;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: protein motif:HMM:NF039482.1;locus_tag=PUW38_13545;product=NAD(+) kinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2765918 2767579 . + . ID=gene-PUW38_13550;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=PUW38_13550 CP118116.1 Protein Homology CDS 2765918 2767579 . + 0 ID=cds-WJG79852.1;Parent=gene-PUW38_13550;Dbxref=NCBI_GP:WJG79852.1;Name=WJG79852.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=PUW38_13550;product=DNA repair protein RecN;protein_id=WJG79852.1;transl_table=11 CP118116.1 Genbank gene 2767728 2768066 . + . ID=gene-PUW38_13555;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=PUW38_13555 CP118116.1 Protein Homology CDS 2767728 2768066 . + 0 ID=cds-WJG79853.1;Parent=gene-PUW38_13555;Dbxref=NCBI_GP:WJG79853.1;Name=WJG79853.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=PUW38_13555;product=outer membrane protein assembly factor BamE;protein_id=WJG79853.1;transl_table=11 CP118116.1 Genbank gene 2768231 2768521 . - . ID=gene-PUW38_13560;Name=PUW38_13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13560 CP118116.1 Protein Homology CDS 2768231 2768521 . - 0 ID=cds-WJG79854.1;Parent=gene-PUW38_13560;Dbxref=NCBI_GP:WJG79854.1;Name=WJG79854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=PUW38_13560;product=RnfH family protein;protein_id=WJG79854.1;transl_table=11 CP118116.1 Genbank gene 2768511 2768948 . - . ID=gene-PUW38_13565;Name=PUW38_13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13565 CP118116.1 Protein Homology CDS 2768511 2768948 . - 0 ID=cds-WJG79855.1;Parent=gene-PUW38_13565;Dbxref=NCBI_GP:WJG79855.1;Name=WJG79855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=PUW38_13565;product=type II toxin-antitoxin system RatA family toxin;protein_id=WJG79855.1;transl_table=11 CP118116.1 Genbank gene 2769137 2769619 . + . ID=gene-PUW38_13570;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=PUW38_13570 CP118116.1 Protein Homology CDS 2769137 2769619 . + 0 ID=cds-WJG79856.1;Parent=gene-PUW38_13570;Dbxref=NCBI_GP:WJG79856.1;Name=WJG79856.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=PUW38_13570;product=SsrA-binding protein SmpB;protein_id=WJG79856.1;transl_table=11 CP118116.1 Genbank pseudogene 2770233 2781690 . + . ID=gene-PUW38_13575;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=pseudogene;locus_tag=PUW38_13575;pseudo=true CP118116.1 Protein Homology CDS 2770233 2781690 . + 0 ID=cds-PUW38_13575;Parent=gene-PUW38_13575;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=PUW38_13575;product=biofilm-associated protein BapA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2781755 2783164 . + . ID=gene-PUW38_13580;Name=PUW38_13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13580 CP118116.1 Protein Homology CDS 2781755 2783164 . + 0 ID=cds-WJG79857.1;Parent=gene-PUW38_13580;Dbxref=NCBI_GP:WJG79857.1;Name=WJG79857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=PUW38_13580;product=TolC family outer membrane protein;protein_id=WJG79857.1;transl_table=11 CP118116.1 Genbank pseudogene 2783161 2785339 . + . ID=gene-PUW38_13585;Name=PUW38_13585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13585;pseudo=true CP118116.1 Protein Homology CDS 2783161 2785339 . + 0 ID=cds-PUW38_13585;Parent=gene-PUW38_13585;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=PUW38_13585;product=type I secretion system permease/ATPase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2785347 2786510 . + . ID=gene-PUW38_13590;Name=PUW38_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13590 CP118116.1 Protein Homology CDS 2785347 2786510 . + 0 ID=cds-WJG83248.1;Parent=gene-PUW38_13590;Dbxref=NCBI_GP:WJG83248.1;Name=WJG83248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=PUW38_13590;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WJG83248.1;transl_table=11 CP118116.1 Genbank gene 2786582 2786944 . + . ID=gene-PUW38_13595;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=PUW38_13595 CP118116.1 cmsearch tmRNA 2786582 2786944 . + . ID=rna-PUW38_13595;Parent=gene-PUW38_13595;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_13595;product=transfer-messenger RNA CP118116.1 cmsearch exon 2786582 2786944 . + . ID=exon-PUW38_13595-1;Parent=rna-PUW38_13595;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_13595;product=transfer-messenger RNA CP118116.1 Genbank gene 2787042 2787635 . + . ID=gene-PUW38_13600;Name=PUW38_13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13600 CP118116.1 Protein Homology CDS 2787042 2787635 . + 0 ID=cds-WJG79858.1;Parent=gene-PUW38_13600;Dbxref=NCBI_GP:WJG79858.1;Name=WJG79858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142974.1;locus_tag=PUW38_13600;product=hypothetical protein;protein_id=WJG79858.1;transl_table=11 CP118116.1 Genbank gene 2788033 2788836 . + . ID=gene-PUW38_13605;Name=PUW38_13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13605 CP118116.1 Protein Homology CDS 2788033 2788836 . + 0 ID=cds-WJG79859.1;Parent=gene-PUW38_13605;Dbxref=NCBI_GP:WJG79859.1;Name=WJG79859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445378.1;locus_tag=PUW38_13605;product=DUF3800 domain-containing protein;protein_id=WJG79859.1;transl_table=11 CP118116.1 Genbank pseudogene 2789533 2789616 . + . ID=gene-PUW38_13610;Name=PUW38_13610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13610;pseudo=true CP118116.1 Protein Homology CDS 2789533 2789616 . + 0 ID=cds-PUW38_13610;Parent=gene-PUW38_13610;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=PUW38_13610;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2789632 2790743 . - . ID=gene-PUW38_13615;Name=PUW38_13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13615 CP118116.1 Protein Homology CDS 2790482 2790743 . - 0 ID=cds-WJG79860.1;Parent=gene-PUW38_13615;Dbxref=NCBI_GP:WJG79860.1;Name=WJG79860.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=PUW38_13615;product=IS3-like element IS1351 family transposase;protein_id=WJG79860.1;transl_table=11 CP118116.1 Protein Homology CDS 2789632 2790482 . - 2 ID=cds-WJG79860.1;Parent=gene-PUW38_13615;Dbxref=NCBI_GP:WJG79860.1;Name=WJG79860.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=PUW38_13615;product=IS3-like element IS1351 family transposase;protein_id=WJG79860.1;transl_table=11 CP118116.1 Genbank pseudogene 2790819 2791202 . + . ID=gene-PUW38_13620;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=PUW38_13620;pseudo=true CP118116.1 Protein Homology CDS 2790819 2791202 . + 0 ID=cds-PUW38_13620;Parent=gene-PUW38_13620;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=PUW38_13620;product=IS200/IS605-like element IS200F family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2791827 2792942 . + . ID=gene-PUW38_13625;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=PUW38_13625 CP118116.1 Protein Homology CDS 2791827 2792942 . + 0 ID=cds-WJG79861.1;Parent=gene-PUW38_13625;Dbxref=NCBI_GP:WJG79861.1;Name=WJG79861.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=PUW38_13625;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WJG79861.1;transl_table=11 CP118116.1 Genbank gene 2793023 2796679 . + . ID=gene-PUW38_13630;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=PUW38_13630 CP118116.1 Protein Homology CDS 2793023 2796679 . + 0 ID=cds-WJG79862.1;Parent=gene-PUW38_13630;Dbxref=NCBI_GP:WJG79862.1;Name=WJG79862.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=PUW38_13630;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WJG79862.1;transl_table=11 CP118116.1 Genbank pseudogene 2796789 2798034 . + . ID=gene-PUW38_13635;Name=PUW38_13635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13635;pseudo=true CP118116.1 Protein Homology CDS 2796789 2798034 . + 0 ID=cds-PUW38_13635;Parent=gene-PUW38_13635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=PUW38_13635;product=esterase family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2798066 2798995 . + . ID=gene-PUW38_13640;Name=PUW38_13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13640 CP118116.1 Protein Homology CDS 2798066 2798995 . + 0 ID=cds-WJG79863.1;Parent=gene-PUW38_13640;Dbxref=NCBI_GP:WJG79863.1;Name=WJG79863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=PUW38_13640;product=alpha/beta hydrolase;protein_id=WJG79863.1;transl_table=11 CP118116.1 Genbank gene 2799037 2801211 . - . ID=gene-PUW38_13645;Name=PUW38_13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13645 CP118116.1 Protein Homology CDS 2799037 2801211 . - 0 ID=cds-WJG79864.1;Parent=gene-PUW38_13645;Dbxref=NCBI_GP:WJG79864.1;Name=WJG79864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=PUW38_13645;product=TonB-dependent siderophore receptor;protein_id=WJG79864.1;transl_table=11 CP118116.1 Genbank pseudogene 2801755 2802074 . - . ID=gene-PUW38_13650;Name=PUW38_13650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13650;pseudo=true CP118116.1 Protein Homology CDS 2801755 2802074 . - 0 ID=cds-PUW38_13650;Parent=gene-PUW38_13650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=PUW38_13650;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2802249 2803301 . - . ID=gene-PUW38_13655;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=pseudogene;locus_tag=PUW38_13655;pseudo=true CP118116.1 Protein Homology CDS 2802249 2803301 . - 0 ID=cds-PUW38_13655;Parent=gene-PUW38_13655;Note=internal stop;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=PUW38_13655;product=SPI-2 type III secretion system effector PipB2;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2803820 2804749 . + . ID=gene-PUW38_13660;Name=PUW38_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13660 CP118116.1 Protein Homology CDS 2803820 2804749 . + 0 ID=cds-WJG79865.1;Parent=gene-PUW38_13660;Dbxref=NCBI_GP:WJG79865.1;Name=WJG79865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=PUW38_13660;product=VirK family antimicrobial peptide resistance protein;protein_id=WJG79865.1;transl_table=11 CP118116.1 Genbank gene 2805043 2805939 . + . ID=gene-PUW38_13665;Name=PUW38_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13665 CP118116.1 Protein Homology CDS 2805043 2805939 . + 0 ID=cds-WJG79866.1;Parent=gene-PUW38_13665;Dbxref=NCBI_GP:WJG79866.1;Name=WJG79866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=PUW38_13665;product=antimicrobial resistance protein Mig-14;protein_id=WJG79866.1;transl_table=11 CP118116.1 Genbank gene 2806661 2807674 . - . ID=gene-PUW38_13670;Name=PUW38_13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13670 CP118116.1 Protein Homology CDS 2806661 2807674 . - 0 ID=cds-WJG79867.1;Parent=gene-PUW38_13670;Dbxref=NCBI_GP:WJG79867.1;Name=WJG79867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=PUW38_13670;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WJG79867.1;transl_table=11 CP118116.1 Genbank gene 2807807 2809222 . - . ID=gene-PUW38_13675;Name=PUW38_13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13675 CP118116.1 Protein Homology CDS 2807807 2809222 . - 0 ID=cds-WJG83249.1;Parent=gene-PUW38_13675;Dbxref=NCBI_GP:WJG83249.1;Name=WJG83249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=PUW38_13675;product=sensor histidine kinase;protein_id=WJG83249.1;transl_table=11 CP118116.1 Genbank gene 2809209 2809883 . - . ID=gene-PUW38_13680;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=PUW38_13680 CP118116.1 Protein Homology CDS 2809209 2809883 . - 0 ID=cds-WJG79868.1;Parent=gene-PUW38_13680;Dbxref=NCBI_GP:WJG79868.1;Name=WJG79868.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=PUW38_13680;product=transcriptional regulator TctD;protein_id=WJG79868.1;transl_table=11 CP118116.1 Genbank gene 2810038 2811015 . + . ID=gene-PUW38_13685;Name=PUW38_13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13685 CP118116.1 Protein Homology CDS 2810038 2811015 . + 0 ID=cds-WJG79869.1;Parent=gene-PUW38_13685;Dbxref=NCBI_GP:WJG79869.1;Name=WJG79869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=PUW38_13685;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WJG79869.1;transl_table=11 CP118116.1 Genbank gene 2811027 2811461 . + . ID=gene-PUW38_13690;Name=PUW38_13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13690 CP118116.1 Protein Homology CDS 2811027 2811461 . + 0 ID=cds-WJG79870.1;Parent=gene-PUW38_13690;Dbxref=NCBI_GP:WJG79870.1;Name=WJG79870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=PUW38_13690;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WJG79870.1;transl_table=11 CP118116.1 Genbank pseudogene 2811472 2812985 . + . ID=gene-PUW38_13695;Name=PUW38_13695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13695;pseudo=true CP118116.1 Protein Homology CDS 2811472 2812985 . + 0 ID=cds-PUW38_13695;Parent=gene-PUW38_13695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=PUW38_13695;product=tripartite tricarboxylate transporter permease;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2813289 2814266 . + . ID=gene-PUW38_13700;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=PUW38_13700 CP118116.1 Protein Homology CDS 2813289 2814266 . + 0 ID=cds-WJG79871.1;Parent=gene-PUW38_13700;Dbxref=NCBI_GP:WJG79871.1;Name=WJG79871.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=PUW38_13700;product=glutarate dioxygenase GlaH;protein_id=WJG79871.1;transl_table=11 CP118116.1 Genbank pseudogene 2814292 2815553 . + . ID=gene-PUW38_13705;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=pseudogene;locus_tag=PUW38_13705;pseudo=true CP118116.1 Protein Homology CDS 2814292 2815553 . + 0 ID=cds-PUW38_13705;Parent=gene-PUW38_13705;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=PUW38_13705;product=L-2-hydroxyglutarate oxidase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2815575 2817022 . + . ID=gene-PUW38_13710;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=pseudogene;locus_tag=PUW38_13710;pseudo=true CP118116.1 Protein Homology CDS 2815575 2817022 . + 0 ID=cds-PUW38_13710;Parent=gene-PUW38_13710;Note=frameshifted;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=PUW38_13710;product=NADP-dependent succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2817037 2818316 . + . ID=gene-PUW38_13715;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=pseudogene;locus_tag=PUW38_13715;pseudo=true CP118116.1 Protein Homology CDS 2817037 2818316 . + 0 ID=cds-PUW38_13715;Parent=gene-PUW38_13715;Note=frameshifted;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=PUW38_13715;product=4-aminobutyrate--2-oxoglutarate transaminase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2818446 2819845 . + . ID=gene-PUW38_13720;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=pseudogene;locus_tag=PUW38_13720;pseudo=true CP118116.1 Protein Homology CDS 2818446 2819845 . + 0 ID=cds-PUW38_13720;Parent=gene-PUW38_13720;Note=frameshifted;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=PUW38_13720;product=GABA permease;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2819887 2820564 . + . ID=gene-PUW38_13725;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=PUW38_13725 CP118116.1 Protein Homology CDS 2819887 2820564 . + 0 ID=cds-WJG79872.1;Parent=gene-PUW38_13725;Dbxref=NCBI_GP:WJG79872.1;Name=WJG79872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=PUW38_13725;product=DNA-binding transcriptional regulator CsiR;protein_id=WJG79872.1;transl_table=11 CP118116.1 Genbank gene 2820586 2821035 . - . ID=gene-PUW38_13730;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=PUW38_13730 CP118116.1 Protein Homology CDS 2820586 2821035 . - 0 ID=cds-WJG79873.1;Parent=gene-PUW38_13730;Dbxref=NCBI_GP:WJG79873.1;Name=WJG79873.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=PUW38_13730;product=peptidoglycan-binding protein LysM;protein_id=WJG79873.1;transl_table=11 CP118116.1 Genbank gene 2821135 2821293 . - . ID=gene-PUW38_13735;Name=PUW38_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13735 CP118116.1 Protein Homology CDS 2821135 2821293 . - 0 ID=cds-WJG79874.1;Parent=gene-PUW38_13735;Dbxref=NCBI_GP:WJG79874.1;Name=WJG79874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=PUW38_13735;product=YqaE/Pmp3 family membrane protein;protein_id=WJG79874.1;transl_table=11 CP118116.1 Genbank gene 2821476 2821775 . + . ID=gene-PUW38_13740;Name=PUW38_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13740 CP118116.1 Protein Homology CDS 2821476 2821775 . + 0 ID=cds-WJG79875.1;Parent=gene-PUW38_13740;Dbxref=NCBI_GP:WJG79875.1;Name=WJG79875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=PUW38_13740;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WJG79875.1;transl_table=11 CP118116.1 Genbank gene 2821785 2822312 . + . ID=gene-PUW38_13745;Name=PUW38_13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13745 CP118116.1 Protein Homology CDS 2821785 2822312 . + 0 ID=cds-WJG79876.1;Parent=gene-PUW38_13745;Dbxref=NCBI_GP:WJG79876.1;Name=WJG79876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=PUW38_13745;product=rhodanese family protein;protein_id=WJG79876.1;transl_table=11 CP118116.1 Genbank gene 2822391 2822570 . + . ID=gene-PUW38_13750;Name=PUW38_13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13750 CP118116.1 Protein Homology CDS 2822391 2822570 . + 0 ID=cds-WJG79877.1;Parent=gene-PUW38_13750;Dbxref=NCBI_GP:WJG79877.1;Name=WJG79877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=PUW38_13750;product=hypothetical protein;protein_id=WJG79877.1;transl_table=11 CP118116.1 Genbank pseudogene 2822660 2823061 . - . ID=gene-PUW38_13755;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=pseudogene;locus_tag=PUW38_13755;pseudo=true CP118116.1 Protein Homology CDS 2822660 2823061 . - 0 ID=cds-PUW38_13755;Parent=gene-PUW38_13755;Note=internal stop;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=PUW38_13755;product=DNA-binding protein StpA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2823759 2824208 . + . ID=gene-PUW38_13760;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=PUW38_13760 CP118116.1 Protein Homology CDS 2823759 2824208 . + 0 ID=cds-WJG79878.1;Parent=gene-PUW38_13760;Dbxref=NCBI_GP:WJG79878.1;Name=WJG79878.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=PUW38_13760;product=L-alanine exporter AlaE;protein_id=WJG79878.1;transl_table=11 CP118116.1 Genbank pseudogene 2824251 2824592 . - . ID=gene-PUW38_13765;Name=PUW38_13765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13765;pseudo=true CP118116.1 Protein Homology CDS 2824251 2824592 . - 0 ID=cds-PUW38_13765;Parent=gene-PUW38_13765;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=PUW38_13765;product=DUF2002 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2824754 2825080 . + . ID=gene-PUW38_13770;Name=PUW38_13770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_13770;pseudo=true CP118116.1 Protein Homology CDS 2824754 2825080 . + 0 ID=cds-PUW38_13770;Parent=gene-PUW38_13770;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914293.1;locus_tag=PUW38_13770;product=DUF883 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2825164 2826498 . - . ID=gene-PUW38_13775;Name=PUW38_13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13775 CP118116.1 Protein Homology CDS 2825164 2826498 . - 0 ID=cds-WJG79879.1;Parent=gene-PUW38_13775;Dbxref=NCBI_GP:WJG79879.1;Name=WJG79879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=PUW38_13775;product=PLP-dependent aminotransferase family protein;protein_id=WJG79879.1;transl_table=11 CP118116.1 Genbank gene 2826587 2827018 . + . ID=gene-PUW38_13780;Name=PUW38_13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13780 CP118116.1 Protein Homology CDS 2826587 2827018 . + 0 ID=cds-WJG83250.1;Parent=gene-PUW38_13780;Dbxref=NCBI_GP:WJG83250.1;Name=WJG83250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=PUW38_13780;product=carboxymuconolactone decarboxylase family protein;protein_id=WJG83250.1;transl_table=11 CP118116.1 Genbank gene 2827290 2827535 . + . ID=gene-PUW38_13785;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=PUW38_13785 CP118116.1 Protein Homology CDS 2827290 2827535 . + 0 ID=cds-WJG79880.1;Parent=gene-PUW38_13785;Dbxref=NCBI_GP:WJG79880.1;Name=WJG79880.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=PUW38_13785;product=glutaredoxin-like protein NrdH;protein_id=WJG79880.1;transl_table=11 CP118116.1 Genbank gene 2827532 2827939 . + . ID=gene-PUW38_13790;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=PUW38_13790 CP118116.1 Protein Homology CDS 2827532 2827939 . + 0 ID=cds-WJG79881.1;Parent=gene-PUW38_13790;Dbxref=NCBI_GP:WJG79881.1;Name=WJG79881.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=PUW38_13790;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WJG79881.1;transl_table=11 CP118116.1 Genbank gene 2827912 2830056 . + . ID=gene-PUW38_13795;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=PUW38_13795 CP118116.1 Protein Homology CDS 2827912 2830056 . + 0 ID=cds-WJG79882.1;Parent=gene-PUW38_13795;Dbxref=NCBI_GP:WJG79882.1;Name=WJG79882.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=PUW38_13795;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WJG79882.1;transl_table=11 CP118116.1 Genbank gene 2830067 2831026 . + . ID=gene-PUW38_13800;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=PUW38_13800 CP118116.1 Protein Homology CDS 2830067 2831026 . + 0 ID=cds-WJG79883.1;Parent=gene-PUW38_13800;Dbxref=NCBI_GP:WJG79883.1;Name=WJG79883.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=PUW38_13800;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WJG79883.1;transl_table=11 CP118116.1 Genbank gene 2831381 2832583 . + . ID=gene-PUW38_13805;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=PUW38_13805 CP118116.1 Protein Homology CDS 2831381 2832583 . + 0 ID=cds-WJG79884.1;Parent=gene-PUW38_13805;Dbxref=NCBI_GP:WJG79884.1;Name=WJG79884.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=PUW38_13805;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WJG79884.1;transl_table=11 CP118116.1 Genbank gene 2832576 2833640 . + . ID=gene-PUW38_13810;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=PUW38_13810 CP118116.1 Protein Homology CDS 2832576 2833640 . + 0 ID=cds-WJG79885.1;Parent=gene-PUW38_13810;Dbxref=NCBI_GP:WJG79885.1;Name=WJG79885.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=PUW38_13810;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WJG79885.1;transl_table=11 CP118116.1 Genbank gene 2833710 2834705 . + . ID=gene-PUW38_13815;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=PUW38_13815 CP118116.1 Protein Homology CDS 2833710 2834705 . + 0 ID=cds-WJG79886.1;Parent=gene-PUW38_13815;Dbxref=NCBI_GP:WJG79886.1;Name=WJG79886.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=PUW38_13815;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WJG79886.1;transl_table=11 CP118116.1 Genbank gene 2834870 2836054 . + . ID=gene-PUW38_13820;Name=PUW38_13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13820 CP118116.1 Protein Homology CDS 2834870 2836054 . + 0 ID=cds-WJG79887.1;Parent=gene-PUW38_13820;Dbxref=NCBI_GP:WJG79887.1;Name=WJG79887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=PUW38_13820;product=MFS transporter;protein_id=WJG79887.1;transl_table=11 CP118116.1 Genbank gene 2836551 2837081 . + . ID=gene-PUW38_13825;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=PUW38_13825 CP118116.1 Protein Homology CDS 2836551 2837081 . + 0 ID=cds-WJG79888.1;Parent=gene-PUW38_13825;Dbxref=NCBI_GP:WJG79888.1;Name=WJG79888.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=PUW38_13825;product=transcriptional repressor MprA;protein_id=WJG79888.1;transl_table=11 CP118116.1 Genbank gene 2837208 2838380 . + . ID=gene-PUW38_13830;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=PUW38_13830 CP118116.1 Protein Homology CDS 2837208 2838380 . + 0 ID=cds-WJG79889.1;Parent=gene-PUW38_13830;Dbxref=NCBI_GP:WJG79889.1;Name=WJG79889.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=PUW38_13830;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WJG79889.1;transl_table=11 CP118116.1 Genbank pseudogene 2838397 2839934 . + . ID=gene-PUW38_13835;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=PUW38_13835;pseudo=true CP118116.1 Protein Homology CDS 2838397 2839934 . + 0 ID=cds-PUW38_13835;Parent=gene-PUW38_13835;Note=frameshifted;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=PUW38_13835;product=multidrug efflux MFS transporter permease subunit EmrB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2839983 2841353 . - . ID=gene-PUW38_13840;Name=PUW38_13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13840 CP118116.1 Protein Homology CDS 2839983 2841353 . - 0 ID=cds-WJG79890.1;Parent=gene-PUW38_13840;Dbxref=NCBI_GP:WJG79890.1;Name=WJG79890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=PUW38_13840;product=carbohydrate porin;protein_id=WJG79890.1;transl_table=11 CP118116.1 Genbank gene 2841698 2842213 . - . ID=gene-PUW38_13845;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=PUW38_13845 CP118116.1 Protein Homology CDS 2841698 2842213 . - 0 ID=cds-WJG79891.1;Parent=gene-PUW38_13845;Dbxref=NCBI_GP:WJG79891.1;Name=WJG79891.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=PUW38_13845;product=S-ribosylhomocysteine lyase;protein_id=WJG79891.1;transl_table=11 CP118116.1 Genbank gene 2842363 2843919 . - . ID=gene-PUW38_13850;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=PUW38_13850 CP118116.1 Protein Homology CDS 2842363 2843919 . - 0 ID=cds-WJG79892.1;Parent=gene-PUW38_13850;Dbxref=NCBI_GP:WJG79892.1;Name=WJG79892.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=PUW38_13850;product=glutamate--cysteine ligase;protein_id=WJG79892.1;transl_table=11 CP118116.1 Genbank gene 2843996 2844421 . - . ID=gene-PUW38_13855;Name=PUW38_13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13855 CP118116.1 Protein Homology CDS 2843996 2844421 . - 0 ID=cds-WJG79893.1;Parent=gene-PUW38_13855;Dbxref=NCBI_GP:WJG79893.1;Name=WJG79893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=PUW38_13855;product=DedA family protein;protein_id=WJG79893.1;transl_table=11 CP118116.1 Genbank pseudogene 2844418 2844983 . - . ID=gene-PUW38_13860;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=pseudogene;locus_tag=PUW38_13860;pseudo=true CP118116.1 Protein Homology CDS 2844418 2844983 . - 0 ID=cds-PUW38_13860;Parent=gene-PUW38_13860;Note=frameshifted;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=PUW38_13860;product=fructose-1-phosphate/6-phosphogluconate phosphatase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2845220 2845296 . - . ID=gene-PUW38_13865;Name=PUW38_13865;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_13865 CP118116.1 tRNAscan-SE tRNA 2845220 2845296 . - . ID=rna-PUW38_13865;Parent=gene-PUW38_13865;anticodon=(pos:complement(2845260..2845262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13865;product=tRNA-Arg CP118116.1 tRNAscan-SE exon 2845220 2845296 . - . ID=exon-PUW38_13865-1;Parent=rna-PUW38_13865;anticodon=(pos:complement(2845260..2845262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13865;product=tRNA-Arg CP118116.1 Genbank gene 2845490 2845566 . - . ID=gene-PUW38_13870;Name=PUW38_13870;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_13870 CP118116.1 tRNAscan-SE tRNA 2845490 2845566 . - . ID=rna-PUW38_13870;Parent=gene-PUW38_13870;anticodon=(pos:complement(2845530..2845532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13870;product=tRNA-Arg CP118116.1 tRNAscan-SE exon 2845490 2845566 . - . ID=exon-PUW38_13870-1;Parent=rna-PUW38_13870;anticodon=(pos:complement(2845530..2845532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13870;product=tRNA-Arg CP118116.1 Genbank gene 2845629 2845705 . - . ID=gene-PUW38_13875;Name=PUW38_13875;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_13875 CP118116.1 tRNAscan-SE tRNA 2845629 2845705 . - . ID=rna-PUW38_13875;Parent=gene-PUW38_13875;anticodon=(pos:complement(2845669..2845671));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13875;product=tRNA-Arg CP118116.1 tRNAscan-SE exon 2845629 2845705 . - . ID=exon-PUW38_13875-1;Parent=rna-PUW38_13875;anticodon=(pos:complement(2845669..2845671));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13875;product=tRNA-Arg CP118116.1 Genbank gene 2845709 2845801 . - . ID=gene-PUW38_13880;Name=PUW38_13880;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_13880 CP118116.1 tRNAscan-SE tRNA 2845709 2845801 . - . ID=rna-PUW38_13880;Parent=gene-PUW38_13880;anticodon=(pos:complement(2845765..2845767));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13880;product=tRNA-Ser CP118116.1 tRNAscan-SE exon 2845709 2845801 . - . ID=exon-PUW38_13880-1;Parent=rna-PUW38_13880;anticodon=(pos:complement(2845765..2845767));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_13880;product=tRNA-Ser CP118116.1 Genbank gene 2846105 2846290 . - . ID=gene-PUW38_13885;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=PUW38_13885 CP118116.1 Protein Homology CDS 2846105 2846290 . - 0 ID=cds-WJG79894.1;Parent=gene-PUW38_13885;Dbxref=NCBI_GP:WJG79894.1;Name=WJG79894.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=PUW38_13885;product=carbon storage regulator CsrA;protein_id=WJG79894.1;transl_table=11 CP118116.1 Genbank gene 2846525 2849155 . - . ID=gene-PUW38_13890;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=PUW38_13890 CP118116.1 Protein Homology CDS 2846525 2849155 . - 0 ID=cds-WJG79895.1;Parent=gene-PUW38_13890;Dbxref=NCBI_GP:WJG79895.1;Name=WJG79895.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=PUW38_13890;product=alanine--tRNA ligase;protein_id=WJG79895.1;transl_table=11 CP118116.1 Genbank gene 2849391 2849891 . - . ID=gene-PUW38_13895;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=PUW38_13895 CP118116.1 Protein Homology CDS 2849391 2849891 . - 0 ID=cds-WJG79896.1;Parent=gene-PUW38_13895;Dbxref=NCBI_GP:WJG79896.1;Name=WJG79896.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=PUW38_13895;product=recombination regulator RecX;protein_id=WJG79896.1;transl_table=11 CP118116.1 Genbank gene 2850008 2851069 . - . ID=gene-PUW38_13900;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=PUW38_13900 CP118116.1 Protein Homology CDS 2850008 2851069 . - 0 ID=cds-WJG79897.1;Parent=gene-PUW38_13900;Dbxref=NCBI_GP:WJG79897.1;Name=WJG79897.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=PUW38_13900;product=recombinase RecA;protein_id=WJG79897.1;transl_table=11 CP118116.1 Genbank pseudogene 2851154 2851650 . - . ID=gene-PUW38_13905;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=pseudogene;locus_tag=PUW38_13905;pseudo=true CP118116.1 Protein Homology CDS 2851154 2851650 . - 0 ID=cds-PUW38_13905;Parent=gene-PUW38_13905;Note=frameshifted;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=PUW38_13905;product=nicotinamide-nucleotide amidase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2851846 2852091 . + . ID=gene-PUW38_13910;Name=PUW38_13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13910 CP118116.1 Protein Homology CDS 2851846 2852091 . + 0 ID=cds-WJG79898.1;Parent=gene-PUW38_13910;Dbxref=NCBI_GP:WJG79898.1;Name=WJG79898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=PUW38_13910;product=hypothetical protein;protein_id=WJG79898.1;transl_table=11 CP118116.1 Genbank gene 2852129 2853208 . - . ID=gene-PUW38_13915;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=PUW38_13915 CP118116.1 Protein Homology CDS 2852129 2853208 . - 0 ID=cds-WJG79899.1;Parent=gene-PUW38_13915;Dbxref=NCBI_GP:WJG79899.1;Name=WJG79899.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=PUW38_13915;product=lytic murein transglycosylase B;protein_id=WJG79899.1;transl_table=11 CP118116.1 Genbank gene 2853462 2854025 . + . ID=gene-PUW38_13920;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=PUW38_13920 CP118116.1 Protein Homology CDS 2853462 2854025 . + 0 ID=cds-WJG79900.1;Parent=gene-PUW38_13920;Dbxref=NCBI_GP:WJG79900.1;Name=WJG79900.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=PUW38_13920;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WJG79900.1;transl_table=11 CP118116.1 Genbank gene 2854022 2854993 . + . ID=gene-PUW38_13925;Name=PUW38_13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13925 CP118116.1 Protein Homology CDS 2854022 2854993 . + 0 ID=cds-WJG79901.1;Parent=gene-PUW38_13925;Dbxref=NCBI_GP:WJG79901.1;Name=WJG79901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=PUW38_13925;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WJG79901.1;transl_table=11 CP118116.1 Genbank gene 2855005 2855367 . + . ID=gene-PUW38_13930;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=PUW38_13930 CP118116.1 Protein Homology CDS 2855005 2855367 . + 0 ID=cds-WJG79902.1;Parent=gene-PUW38_13930;Dbxref=NCBI_GP:WJG79902.1;Name=WJG79902.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=PUW38_13930;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WJG79902.1;transl_table=11 CP118116.1 Genbank gene 2855379 2856158 . + . ID=gene-PUW38_13935;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=PUW38_13935 CP118116.1 Protein Homology CDS 2855379 2856158 . + 0 ID=cds-WJG79903.1;Parent=gene-PUW38_13935;Dbxref=NCBI_GP:WJG79903.1;Name=WJG79903.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=PUW38_13935;product=sorbitol-6-phosphate dehydrogenase;protein_id=WJG79903.1;transl_table=11 CP118116.1 Genbank gene 2856235 2856594 . + . ID=gene-PUW38_13940;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=PUW38_13940 CP118116.1 Protein Homology CDS 2856235 2856594 . + 0 ID=cds-WJG79904.1;Parent=gene-PUW38_13940;Dbxref=NCBI_GP:WJG79904.1;Name=WJG79904.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=PUW38_13940;product=transcriptional regulator GutM;protein_id=WJG79904.1;transl_table=11 CP118116.1 Genbank gene 2856792 2857565 . + . ID=gene-PUW38_13945;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=PUW38_13945 CP118116.1 Protein Homology CDS 2856792 2857565 . + 0 ID=cds-WJG79905.1;Parent=gene-PUW38_13945;Dbxref=NCBI_GP:WJG79905.1;Name=WJG79905.1;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=PUW38_13945;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WJG79905.1;transl_table=11 CP118116.1 Genbank gene 2857558 2858523 . + . ID=gene-PUW38_13950;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=PUW38_13950 CP118116.1 Protein Homology CDS 2857558 2858523 . + 0 ID=cds-WJG79906.1;Parent=gene-PUW38_13950;Dbxref=NCBI_GP:WJG79906.1;Name=WJG79906.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=PUW38_13950;product=arabinose-5-phosphate isomerase GutQ;protein_id=WJG79906.1;transl_table=11 CP118116.1 Genbank pseudogene 2858520 2860039 . - . ID=gene-PUW38_13955;Name=norR;gbkey=Gene;gene=norR;gene_biotype=pseudogene;locus_tag=PUW38_13955;pseudo=true CP118116.1 Protein Homology CDS 2858520 2860039 . - 0 ID=cds-PUW38_13955;Parent=gene-PUW38_13955;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=PUW38_13955;product=nitric oxide reductase transcriptional regulator NorR;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2860225 2861658 . + . ID=gene-PUW38_13960;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=PUW38_13960 CP118116.1 Protein Homology CDS 2860225 2861658 . + 0 ID=cds-WJG79907.1;Parent=gene-PUW38_13960;Dbxref=NCBI_GP:WJG79907.1;Name=WJG79907.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=PUW38_13960;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WJG79907.1;transl_table=11 CP118116.1 Genbank gene 2861655 2862788 . + . ID=gene-PUW38_13965;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=PUW38_13965 CP118116.1 Protein Homology CDS 2861655 2862788 . + 0 ID=cds-WJG79908.1;Parent=gene-PUW38_13965;Dbxref=NCBI_GP:WJG79908.1;Name=WJG79908.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=PUW38_13965;product=NADH:flavorubredoxin reductase NorW;protein_id=WJG79908.1;transl_table=11 CP118116.1 Genbank gene 2862885 2865125 . - . ID=gene-PUW38_13970;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=PUW38_13970 CP118116.1 Protein Homology CDS 2862885 2865125 . - 0 ID=cds-WJG79909.1;Parent=gene-PUW38_13970;Dbxref=NCBI_GP:WJG79909.1;Name=WJG79909.1;Ontology_term=GO:0036211,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=PUW38_13970;product=carbamoyltransferase HypF;protein_id=WJG79909.1;transl_table=11 CP118116.1 Genbank gene 2865271 2865816 . - . ID=gene-PUW38_13975;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=PUW38_13975 CP118116.1 Protein Homology CDS 2865271 2865816 . - 0 ID=cds-WJG79910.1;Parent=gene-PUW38_13975;Dbxref=NCBI_GP:WJG79910.1;Name=WJG79910.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=PUW38_13975;product=electron transport protein HydN;protein_id=WJG79910.1;transl_table=11 CP118116.1 Genbank gene 2866017 2866826 . - . ID=gene-PUW38_13980;Name=PUW38_13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13980 CP118116.1 Protein Homology CDS 2866017 2866826 . - 0 ID=cds-WJG79911.1;Parent=gene-PUW38_13980;Dbxref=NCBI_GP:WJG79911.1;Name=WJG79911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=PUW38_13980;product=hypothetical protein;protein_id=WJG79911.1;transl_table=11 CP118116.1 Genbank gene 2866853 2867323 . - . ID=gene-PUW38_13985;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=PUW38_13985 CP118116.1 Protein Homology CDS 2866853 2867323 . - 0 ID=cds-WJG79912.1;Parent=gene-PUW38_13985;Dbxref=NCBI_GP:WJG79912.1;Name=WJG79912.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=PUW38_13985;product=hydrogenase maturation peptidase HycI;protein_id=WJG79912.1;transl_table=11 CP118116.1 Genbank gene 2867316 2867726 . - . ID=gene-PUW38_13990;Name=PUW38_13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_13990 CP118116.1 Protein Homology CDS 2867316 2867726 . - 0 ID=cds-WJG79913.1;Parent=gene-PUW38_13990;Dbxref=NCBI_GP:WJG79913.1;Name=WJG79913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=PUW38_13990;product=formate hydrogenlyase maturation HycH family protein;protein_id=WJG79913.1;transl_table=11 CP118116.1 Genbank pseudogene 2867723 2868489 . - . ID=gene-PUW38_13995;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=pseudogene;locus_tag=PUW38_13995;pseudo=true CP118116.1 Protein Homology CDS 2867723 2868489 . - 0 ID=cds-PUW38_13995;Parent=gene-PUW38_13995;Note=frameshifted;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=PUW38_13995;product=formate hydrogenlyase subunit HycG;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2868489 2869031 . - . ID=gene-PUW38_14000;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=PUW38_14000 CP118116.1 Protein Homology CDS 2868489 2869031 . - 0 ID=cds-WJG79914.1;Parent=gene-PUW38_14000;Dbxref=NCBI_GP:WJG79914.1;Name=WJG79914.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=PUW38_14000;product=formate hydrogenlyase subunit HycF;protein_id=WJG79914.1;transl_table=11 CP118116.1 Genbank gene 2869041 2870726 . - . ID=gene-PUW38_14005;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=PUW38_14005 CP118116.1 Protein Homology CDS 2869041 2870726 . - 0 ID=cds-WJG79915.1;Parent=gene-PUW38_14005;Dbxref=NCBI_GP:WJG79915.1;Name=WJG79915.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=PUW38_14005;product=formate hydrogenlyase subunit HycE;protein_id=WJG79915.1;transl_table=11 CP118116.1 Genbank gene 2870744 2871667 . - . ID=gene-PUW38_14010;Name=PUW38_14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14010 CP118116.1 Protein Homology CDS 2870744 2871667 . - 0 ID=cds-WJG79916.1;Parent=gene-PUW38_14010;Dbxref=NCBI_GP:WJG79916.1;Name=WJG79916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=PUW38_14010;product=respiratory chain complex I subunit 1 family protein;protein_id=WJG79916.1;transl_table=11 CP118116.1 Genbank gene 2871670 2873496 . - . ID=gene-PUW38_14015;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=PUW38_14015 CP118116.1 Protein Homology CDS 2871670 2873496 . - 0 ID=cds-WJG79917.1;Parent=gene-PUW38_14015;Dbxref=NCBI_GP:WJG79917.1;Name=WJG79917.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=PUW38_14015;product=formate hydrogenlyase subunit 3;protein_id=WJG79917.1;transl_table=11 CP118116.1 Genbank gene 2873496 2874104 . - . ID=gene-PUW38_14020;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=PUW38_14020 CP118116.1 Protein Homology CDS 2873496 2874104 . - 0 ID=cds-WJG79918.1;Parent=gene-PUW38_14020;Dbxref=NCBI_GP:WJG79918.1;Name=WJG79918.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=PUW38_14020;product=formate hydrogenlyase subunit HycB;protein_id=WJG79918.1;transl_table=11 CP118116.1 Genbank gene 2874250 2874711 . - . ID=gene-PUW38_14025;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=PUW38_14025 CP118116.1 Protein Homology CDS 2874250 2874711 . - 0 ID=cds-WJG79919.1;Parent=gene-PUW38_14025;Dbxref=NCBI_GP:WJG79919.1;Name=WJG79919.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=PUW38_14025;product=formate hydrogenlyase regulator HycA;protein_id=WJG79919.1;transl_table=11 CP118116.1 Genbank gene 2874921 2875277 . + . ID=gene-PUW38_14030;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW38_14030 CP118116.1 Protein Homology CDS 2874921 2875277 . + 0 ID=cds-WJG79920.1;Parent=gene-PUW38_14030;Dbxref=NCBI_GP:WJG79920.1;Name=WJG79920.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=PUW38_14030;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJG79920.1;transl_table=11 CP118116.1 Genbank gene 2875346 2876218 . + . ID=gene-PUW38_14035;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=PUW38_14035 CP118116.1 Protein Homology CDS 2875346 2876218 . + 0 ID=cds-WJG79921.1;Parent=gene-PUW38_14035;Dbxref=NCBI_GP:WJG79921.1;Name=WJG79921.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=PUW38_14035;product=hydrogenase nickel incorporation protein HypB;protein_id=WJG79921.1;transl_table=11 CP118116.1 Genbank gene 2876209 2876481 . + . ID=gene-PUW38_14040;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=PUW38_14040 CP118116.1 Protein Homology CDS 2876209 2876481 . + 0 ID=cds-WJG79922.1;Parent=gene-PUW38_14040;Dbxref=NCBI_GP:WJG79922.1;Name=WJG79922.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=PUW38_14040;product=hydrogenase 3 maturation protein HypC;protein_id=WJG79922.1;transl_table=11 CP118116.1 Genbank gene 2876481 2877602 . + . ID=gene-PUW38_14045;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=PUW38_14045 CP118116.1 Protein Homology CDS 2876481 2877602 . + 0 ID=cds-WJG79923.1;Parent=gene-PUW38_14045;Dbxref=NCBI_GP:WJG79923.1;Name=WJG79923.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=PUW38_14045;product=hydrogenase formation protein HypD;protein_id=WJG79923.1;transl_table=11 CP118116.1 Genbank gene 2877599 2878609 . + . ID=gene-PUW38_14050;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=PUW38_14050 CP118116.1 Protein Homology CDS 2877599 2878609 . + 0 ID=cds-WJG79924.1;Parent=gene-PUW38_14050;Dbxref=NCBI_GP:WJG79924.1;Name=WJG79924.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=PUW38_14050;product=hydrogenase expression/formation protein HypE;protein_id=WJG79924.1;transl_table=11 CP118116.1 Genbank gene 2878827 2880905 . + . ID=gene-PUW38_14055;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=PUW38_14055 CP118116.1 Protein Homology CDS 2878827 2880905 . + 0 ID=cds-WJG79925.1;Parent=gene-PUW38_14055;Dbxref=NCBI_GP:WJG79925.1;Name=WJG79925.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=PUW38_14055;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WJG79925.1;transl_table=11 CP118116.1 Genbank gene 2880967 2881311 . - . ID=gene-PUW38_14060;Name=PUW38_14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14060 CP118116.1 Protein Homology CDS 2880967 2881311 . - 0 ID=cds-WJG79926.1;Parent=gene-PUW38_14060;Dbxref=NCBI_GP:WJG79926.1;Name=WJG79926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=PUW38_14060;product=nitrous oxide-stimulated promoter family protein;protein_id=WJG79926.1;transl_table=11 CP118116.1 Genbank gene 2881493 2882410 . + . ID=gene-PUW38_14065;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=PUW38_14065 CP118116.1 Protein Homology CDS 2881493 2882410 . + 0 ID=cds-WJG79927.1;Parent=gene-PUW38_14065;Dbxref=NCBI_GP:WJG79927.1;Name=WJG79927.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=PUW38_14065;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WJG79927.1;transl_table=11 CP118116.1 Genbank gene 2882407 2883228 . + . ID=gene-PUW38_14070;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=PUW38_14070 CP118116.1 Protein Homology CDS 2882407 2883228 . + 0 ID=cds-WJG79928.1;Parent=gene-PUW38_14070;Dbxref=NCBI_GP:WJG79928.1;Name=WJG79928.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=PUW38_14070;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WJG79928.1;transl_table=11 CP118116.1 Genbank gene 2883225 2884085 . + . ID=gene-PUW38_14075;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=PUW38_14075 CP118116.1 Protein Homology CDS 2883225 2884085 . + 0 ID=cds-WJG79929.1;Parent=gene-PUW38_14075;Dbxref=NCBI_GP:WJG79929.1;Name=WJG79929.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=PUW38_14075;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WJG79929.1;transl_table=11 CP118116.1 Genbank pseudogene 2884076 2884923 . + . ID=gene-PUW38_14080;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=pseudogene;locus_tag=PUW38_14080;pseudo=true CP118116.1 Protein Homology CDS 2884076 2884923 . + 0 ID=cds-PUW38_14080;Parent=gene-PUW38_14080;Note=frameshifted;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=PUW38_14080;product=iron/manganese ABC transporter permease subunit SitD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2885022 2885930 . - . ID=gene-PUW38_14085;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=PUW38_14085 CP118116.1 Protein Homology CDS 2885022 2885930 . - 0 ID=cds-WJG79930.1;Parent=gene-PUW38_14085;Dbxref=NCBI_GP:WJG79930.1;Name=WJG79930.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576330.1;locus_tag=PUW38_14085;product=type III secretion system YopJ family effector AvrA;protein_id=WJG79930.1;transl_table=11 CP118116.1 Genbank gene 2886091 2886846 . - . ID=gene-PUW38_14090;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=PUW38_14090 CP118116.1 Protein Homology CDS 2886091 2886846 . - 0 ID=cds-WJG79931.1;Parent=gene-PUW38_14090;Dbxref=NCBI_GP:WJG79931.1;Name=WJG79931.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=PUW38_14090;product=transcriptional regulator SprB;protein_id=WJG79931.1;transl_table=11 CP118116.1 Genbank gene 2887231 2888118 . - . ID=gene-PUW38_14095;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=PUW38_14095 CP118116.1 Protein Homology CDS 2887231 2888118 . - 0 ID=cds-WJG79932.1;Parent=gene-PUW38_14095;Dbxref=NCBI_GP:WJG79932.1;Name=WJG79932.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=PUW38_14095;product=invasion transcriptional regulator HilC;protein_id=WJG79932.1;transl_table=11 CP118116.1 Genbank gene 2888463 2888915 . - . ID=gene-PUW38_14100;Name=PUW38_14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14100 CP118116.1 Protein Homology CDS 2888463 2888915 . - 0 ID=cds-WJG83251.1;Parent=gene-PUW38_14100;Dbxref=NCBI_GP:WJG83251.1;Name=WJG83251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=PUW38_14100;product=type III secretion system effector protein OrgC;protein_id=WJG83251.1;transl_table=11 CP118116.1 Genbank gene 2888912 2889592 . - . ID=gene-PUW38_14105;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=PUW38_14105 CP118116.1 Protein Homology CDS 2888912 2889592 . - 0 ID=cds-WJG79933.1;Parent=gene-PUW38_14105;Dbxref=NCBI_GP:WJG79933.1;Name=WJG79933.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=PUW38_14105;product=type III secretion system linker protein OrgB;protein_id=WJG79933.1;transl_table=11 CP118116.1 Genbank gene 2889549 2890148 . - . ID=gene-PUW38_14110;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=PUW38_14110 CP118116.1 Protein Homology CDS 2889549 2890148 . - 0 ID=cds-WJG79934.1;Parent=gene-PUW38_14110;Dbxref=NCBI_GP:WJG79934.1;Name=WJG79934.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=PUW38_14110;product=oxygen-regulated invasion protein OrgA;protein_id=WJG79934.1;transl_table=11 CP118116.1 Genbank gene 2890120 2890878 . - . ID=gene-PUW38_14115;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=PUW38_14115 CP118116.1 Protein Homology CDS 2890120 2890878 . - 0 ID=cds-WJG79935.1;Parent=gene-PUW38_14115;Dbxref=NCBI_GP:WJG79935.1;Name=WJG79935.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=PUW38_14115;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WJG79935.1;transl_table=11 CP118116.1 Genbank gene 2890875 2891180 . - . ID=gene-PUW38_14120;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=PUW38_14120 CP118116.1 Protein Homology CDS 2890875 2891180 . - 0 ID=cds-WJG79936.1;Parent=gene-PUW38_14120;Dbxref=NCBI_GP:WJG79936.1;Name=WJG79936.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=PUW38_14120;product=type III secretion system inner rod protein PrgJ;protein_id=WJG79936.1;transl_table=11 CP118116.1 Genbank gene 2891199 2891441 . - . ID=gene-PUW38_14125;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=PUW38_14125 CP118116.1 Protein Homology CDS 2891199 2891441 . - 0 ID=cds-WJG79937.1;Parent=gene-PUW38_14125;Dbxref=NCBI_GP:WJG79937.1;Name=WJG79937.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=PUW38_14125;product=type III secretion system needle filament protein PrgI;protein_id=WJG79937.1;transl_table=11 CP118116.1 Genbank gene 2891466 2892644 . - . ID=gene-PUW38_14130;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=PUW38_14130 CP118116.1 Protein Homology CDS 2891466 2892644 . - 0 ID=cds-WJG79938.1;Parent=gene-PUW38_14130;Dbxref=NCBI_GP:WJG79938.1;Name=WJG79938.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=PUW38_14130;product=type III secretion system inner membrane ring protein PrgH;protein_id=WJG79938.1;transl_table=11 CP118116.1 Genbank gene 2892959 2893888 . + . ID=gene-PUW38_14135;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=PUW38_14135 CP118116.1 Protein Homology CDS 2892959 2893888 . + 0 ID=cds-WJG79939.1;Parent=gene-PUW38_14135;Dbxref=NCBI_GP:WJG79939.1;Name=WJG79939.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=PUW38_14135;product=transcriptional regulator HilD;protein_id=WJG79939.1;transl_table=11 CP118116.1 Genbank gene 2894978 2896639 . + . ID=gene-PUW38_14140;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=PUW38_14140 CP118116.1 Protein Homology CDS 2894978 2896639 . + 0 ID=cds-WJG79940.1;Parent=gene-PUW38_14140;Dbxref=NCBI_GP:WJG79940.1;Name=WJG79940.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=PUW38_14140;product=transcriptional regulator HilA;protein_id=WJG79940.1;transl_table=11 CP118116.1 Genbank pseudogene 2896657 2897138 . + . ID=gene-PUW38_14145;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=pseudogene;locus_tag=PUW38_14145;pseudo=true CP118116.1 Protein Homology CDS 2896657 2897138 . + 0 ID=cds-PUW38_14145;Parent=gene-PUW38_14145;Note=frameshifted;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=PUW38_14145;product=SPI-1 type III secretion system invasion protein IagB;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2897192 2898822 . - . ID=gene-PUW38_14150;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=pseudogene;locus_tag=PUW38_14150;pseudo=true CP118116.1 Protein Homology CDS 2897192 2898822 . - 0 ID=cds-PUW38_14150;Parent=gene-PUW38_14150;Note=frameshifted;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540778.1;locus_tag=PUW38_14150;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2898809 2899201 . - . ID=gene-PUW38_14155;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=PUW38_14155 CP118116.1 Protein Homology CDS 2898809 2899201 . - 0 ID=cds-WJG79941.1;Parent=gene-PUW38_14155;Dbxref=NCBI_GP:WJG79941.1;Name=WJG79941.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=PUW38_14155;product=chaperone SicP;protein_id=WJG79941.1;transl_table=11 CP118116.1 Genbank gene 2899228 2899488 . - . ID=gene-PUW38_14160;Name=PUW38_14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14160 CP118116.1 Protein Homology CDS 2899228 2899488 . - 0 ID=cds-WJG79942.1;Parent=gene-PUW38_14160;Dbxref=NCBI_GP:WJG79942.1;Name=WJG79942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=PUW38_14160;product=hypothetical protein;protein_id=WJG79942.1;transl_table=11 CP118116.1 Genbank gene 2899532 2899780 . - . ID=gene-PUW38_14165;Name=PUW38_14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14165 CP118116.1 Protein Homology CDS 2899532 2899780 . - 0 ID=cds-WJG79943.1;Parent=gene-PUW38_14165;Dbxref=NCBI_GP:WJG79943.1;Name=WJG79943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=PUW38_14165;product=acyl carrier protein;protein_id=WJG79943.1;transl_table=11 CP118116.1 Genbank pseudogene 2899799 2901855 . - . ID=gene-PUW38_14170;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=pseudogene;locus_tag=PUW38_14170;pseudo=true CP118116.1 Protein Homology CDS 2899799 2901855 . - 0 ID=cds-PUW38_14170;Parent=gene-PUW38_14170;Note=frameshifted;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=PUW38_14170;product=SPI-1 type III secretion system effector SipA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2901874 2902905 . - . ID=gene-PUW38_14175;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=PUW38_14175 CP118116.1 Protein Homology CDS 2901874 2902905 . - 0 ID=cds-WJG79944.1;Parent=gene-PUW38_14175;Dbxref=NCBI_GP:WJG79944.1;Name=WJG79944.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=PUW38_14175;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WJG79944.1;transl_table=11 CP118116.1 Genbank pseudogene 2902976 2904204 . - . ID=gene-PUW38_14180;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=pseudogene;locus_tag=PUW38_14180;pseudo=true CP118116.1 Protein Homology CDS 2902976 2904204 . - 0 ID=cds-PUW38_14180;Parent=gene-PUW38_14180;Note=frameshifted;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=PUW38_14180;product=SPI-1 type III secretion system needle tip complex protein SipC;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2904232 2906013 . - . ID=gene-PUW38_14185;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=PUW38_14185 CP118116.1 Protein Homology CDS 2904232 2906013 . - 0 ID=cds-WJG79945.1;Parent=gene-PUW38_14185;Dbxref=NCBI_GP:WJG79945.1;Name=WJG79945.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=PUW38_14185;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WJG79945.1;transl_table=11 CP118116.1 Genbank gene 2906016 2906513 . - . ID=gene-PUW38_14190;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=PUW38_14190 CP118116.1 Protein Homology CDS 2906016 2906513 . - 0 ID=cds-WJG79946.1;Parent=gene-PUW38_14190;Dbxref=NCBI_GP:WJG79946.1;Name=WJG79946.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=PUW38_14190;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WJG79946.1;transl_table=11 CP118116.1 Genbank pseudogene 2906651 2907720 . - . ID=gene-PUW38_14195;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=pseudogene;locus_tag=PUW38_14195;pseudo=true CP118116.1 Protein Homology CDS 2906651 2907720 . - 0 ID=cds-PUW38_14195;Parent=gene-PUW38_14195;Note=frameshifted;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=PUW38_14195;product=SPI-1 type III secretion system export apparatus protein SpaS;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2907707 2908498 . - . ID=gene-PUW38_14200;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=PUW38_14200 CP118116.1 Protein Homology CDS 2907707 2908498 . - 0 ID=cds-WJG79947.1;Parent=gene-PUW38_14200;Dbxref=NCBI_GP:WJG79947.1;Name=WJG79947.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=PUW38_14200;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WJG79947.1;transl_table=11 CP118116.1 Genbank gene 2908502 2908762 . - . ID=gene-PUW38_14205;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=PUW38_14205 CP118116.1 Protein Homology CDS 2908502 2908762 . - 0 ID=cds-WJG79948.1;Parent=gene-PUW38_14205;Dbxref=NCBI_GP:WJG79948.1;Name=WJG79948.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=PUW38_14205;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WJG79948.1;transl_table=11 CP118116.1 Genbank gene 2908788 2909462 . - . ID=gene-PUW38_14210;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=PUW38_14210 CP118116.1 Protein Homology CDS 2908788 2909462 . - 0 ID=cds-WJG79949.1;Parent=gene-PUW38_14210;Dbxref=NCBI_GP:WJG79949.1;Name=WJG79949.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=PUW38_14210;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WJG79949.1;transl_table=11 CP118116.1 Genbank gene 2909452 2910363 . - . ID=gene-PUW38_14215;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=PUW38_14215 CP118116.1 Protein Homology CDS 2909452 2910363 . - 0 ID=cds-WJG79950.1;Parent=gene-PUW38_14215;Dbxref=NCBI_GP:WJG79950.1;Name=WJG79950.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=PUW38_14215;product=SPI-1 type III secretion system protein SpaO;protein_id=WJG79950.1;transl_table=11 CP118116.1 Genbank gene 2910363 2911373 . - . ID=gene-PUW38_14220;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=PUW38_14220 CP118116.1 Protein Homology CDS 2910363 2911373 . - 0 ID=cds-WJG79951.1;Parent=gene-PUW38_14220;Dbxref=NCBI_GP:WJG79951.1;Name=WJG79951.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=PUW38_14220;product=SPI-1 type III secretion system protein SpaN;protein_id=WJG79951.1;transl_table=11 CP118116.1 Genbank gene 2911373 2911816 . - . ID=gene-PUW38_14225;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=PUW38_14225 CP118116.1 Protein Homology CDS 2911373 2911816 . - 0 ID=cds-WJG79952.1;Parent=gene-PUW38_14225;Dbxref=NCBI_GP:WJG79952.1;Name=WJG79952.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=PUW38_14225;product=SPI-1 type III secretion system protein SpaM;protein_id=WJG79952.1;transl_table=11 CP118116.1 Genbank gene 2911794 2913089 . - . ID=gene-PUW38_14230;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=PUW38_14230 CP118116.1 Protein Homology CDS 2911794 2913089 . - 0 ID=cds-WJG79953.1;Parent=gene-PUW38_14230;Dbxref=NCBI_GP:WJG79953.1;Name=WJG79953.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=PUW38_14230;product=SctN family type III secretion system ATPase InvC;protein_id=WJG79953.1;transl_table=11 CP118116.1 Genbank pseudogene 2913086 2913492 . - . ID=gene-PUW38_14235;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=pseudogene;locus_tag=PUW38_14235;pseudo=true CP118116.1 Protein Homology CDS 2913086 2913492 . - 0 ID=cds-PUW38_14235;Parent=gene-PUW38_14235;Note=frameshifted;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=PUW38_14235;product=SPI-1 type III secretion system chaperone SpaK;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2913516 2915573 . - . ID=gene-PUW38_14240;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=PUW38_14240 CP118116.1 Protein Homology CDS 2913516 2915573 . - 0 ID=cds-WJG79954.1;Parent=gene-PUW38_14240;Dbxref=NCBI_GP:WJG79954.1;Name=WJG79954.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=PUW38_14240;product=type III secretion system export apparatus protein InvA;protein_id=WJG79954.1;transl_table=11 CP118116.1 Genbank gene 2915598 2916716 . - . ID=gene-PUW38_14245;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=PUW38_14245 CP118116.1 Protein Homology CDS 2915598 2916716 . - 0 ID=cds-WJG79955.1;Parent=gene-PUW38_14245;Dbxref=NCBI_GP:WJG79955.1;Name=WJG79955.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=PUW38_14245;product=type III secretion system gatekeeper InvE;protein_id=WJG79955.1;transl_table=11 CP118116.1 Genbank gene 2916713 2918401 . - . ID=gene-PUW38_14250;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=PUW38_14250 CP118116.1 Protein Homology CDS 2916713 2918401 . - 0 ID=cds-WJG79956.1;Parent=gene-PUW38_14250;Dbxref=NCBI_GP:WJG79956.1;Name=WJG79956.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=PUW38_14250;product=type III secretion system outer membrane ring protein InvG;protein_id=WJG79956.1;transl_table=11 CP118116.1 Genbank pseudogene 2918398 2919047 . - . ID=gene-PUW38_14255;Name=invF;gbkey=Gene;gene=invF;gene_biotype=pseudogene;locus_tag=PUW38_14255;pseudo=true CP118116.1 Protein Homology CDS 2918398 2919047 . - 0 ID=cds-PUW38_14255;Parent=gene-PUW38_14255;Note=frameshifted;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=PUW38_14255;product=type III secretion system transcriptional activator InvF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2919503 2919946 . + . ID=gene-PUW38_14260;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=PUW38_14260 CP118116.1 Protein Homology CDS 2919503 2919946 . + 0 ID=cds-WJG79957.1;Parent=gene-PUW38_14260;Dbxref=NCBI_GP:WJG79957.1;Name=WJG79957.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=PUW38_14260;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WJG79957.1;transl_table=11 CP118116.1 Genbank pseudogene 2920350 2920539 . + . ID=gene-PUW38_14265;Name=PUW38_14265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_14265;pseudo=true CP118116.1 Protein Homology CDS 2920350 2920539 . + 0 ID=cds-PUW38_14265;Parent=gene-PUW38_14265;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=PUW38_14265;product=IS3 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2920809 2921099 . + . ID=gene-PUW38_14270;Name=PUW38_14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14270 CP118116.1 Protein Homology CDS 2920809 2921099 . + 0 ID=cds-WJG79958.1;Parent=gene-PUW38_14270;Dbxref=NCBI_GP:WJG79958.1;Name=WJG79958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=PUW38_14270;product=DUF1778 domain-containing protein;protein_id=WJG79958.1;transl_table=11 CP118116.1 Genbank gene 2921096 2921623 . + . ID=gene-PUW38_14275;Name=PUW38_14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14275 CP118116.1 Protein Homology CDS 2921096 2921623 . + 0 ID=cds-WJG79959.1;Parent=gene-PUW38_14275;Dbxref=NCBI_GP:WJG79959.1;Name=WJG79959.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=PUW38_14275;product=GNAT family N-acetyltransferase;protein_id=WJG79959.1;transl_table=11 CP118116.1 Genbank pseudogene 2921696 2921901 . - . ID=gene-PUW38_14280;Name=PUW38_14280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_14280;pseudo=true CP118116.1 Protein Homology CDS 2921696 2921901 . - 0 ID=cds-PUW38_14280;Parent=gene-PUW38_14280;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=PUW38_14280;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2922260 2922916 . + . ID=gene-PUW38_14285;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=PUW38_14285 CP118116.1 Protein Homology CDS 2922260 2922916 . + 0 ID=cds-WJG79960.1;Parent=gene-PUW38_14285;Dbxref=NCBI_GP:WJG79960.1;Name=WJG79960.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=PUW38_14285;product=protein-serine/threonine phosphatase;protein_id=WJG79960.1;transl_table=11 CP118116.1 Genbank gene 2923161 2923655 . - . ID=gene-PUW38_14290;Name=PUW38_14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14290 CP118116.1 Protein Homology CDS 2923161 2923655 . - 0 ID=cds-WJG79961.1;Parent=gene-PUW38_14290;Dbxref=NCBI_GP:WJG79961.1;Name=WJG79961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424949.1;locus_tag=PUW38_14290;product=hypothetical protein;protein_id=WJG79961.1;transl_table=11 CP118116.1 Genbank gene 2923682 2924350 . - . ID=gene-PUW38_14295;Name=PUW38_14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14295 CP118116.1 Protein Homology CDS 2923682 2924350 . - 0 ID=cds-WJG79962.1;Parent=gene-PUW38_14295;Dbxref=NCBI_GP:WJG79962.1;Name=WJG79962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445913.1;locus_tag=PUW38_14295;product=hypothetical protein;protein_id=WJG79962.1;transl_table=11 CP118116.1 Genbank pseudogene 2924936 2925333 . - . ID=gene-PUW38_14300;Name=PUW38_14300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_14300;pseudo=true CP118116.1 Protein Homology CDS 2924936 2925333 . - 0 ID=cds-PUW38_14300;Parent=gene-PUW38_14300;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=PUW38_14300;product=cytoplasmic protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2925492 2928059 . + . ID=gene-PUW38_14305;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=PUW38_14305 CP118116.1 Protein Homology CDS 2925492 2928059 . + 0 ID=cds-WJG79963.1;Parent=gene-PUW38_14305;Dbxref=NCBI_GP:WJG79963.1;Name=WJG79963.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=PUW38_14305;product=DNA mismatch repair protein MutS;protein_id=WJG79963.1;transl_table=11 CP118116.1 Genbank gene 2928102 2928482 . - . ID=gene-PUW38_14310;Name=PUW38_14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14310 CP118116.1 Protein Homology CDS 2928102 2928482 . - 0 ID=cds-WJG79964.1;Parent=gene-PUW38_14310;Dbxref=NCBI_GP:WJG79964.1;Name=WJG79964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=PUW38_14310;product=DUF4440 domain-containing protein;protein_id=WJG79964.1;transl_table=11 CP118116.1 Genbank gene 2928479 2929687 . - . ID=gene-PUW38_14315;Name=PUW38_14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14315 CP118116.1 Protein Homology CDS 2928479 2929687 . - 0 ID=cds-WJG79965.1;Parent=gene-PUW38_14315;Dbxref=NCBI_GP:WJG79965.1;Name=WJG79965.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222390.1;locus_tag=PUW38_14315;product=MFS transporter;protein_id=WJG79965.1;transl_table=11 CP118116.1 Genbank gene 2929775 2930707 . + . ID=gene-PUW38_14320;Name=PUW38_14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14320 CP118116.1 Protein Homology CDS 2929775 2930707 . + 0 ID=cds-WJG79966.1;Parent=gene-PUW38_14320;Dbxref=NCBI_GP:WJG79966.1;Name=WJG79966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=PUW38_14320;product=LysR substrate-binding domain-containing protein;protein_id=WJG79966.1;transl_table=11 CP118116.1 Genbank gene 2930749 2932245 . - . ID=gene-PUW38_14325;Name=PUW38_14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14325 CP118116.1 Protein Homology CDS 2930749 2932245 . - 0 ID=cds-WJG79967.1;Parent=gene-PUW38_14325;Dbxref=NCBI_GP:WJG79967.1;Name=WJG79967.1;Ontology_term=GO:0015718,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=solute:proton symporter activity|0015295||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=PUW38_14325;product=gluconate:H+ symporter;protein_id=WJG79967.1;transl_table=11 CP118116.1 Genbank gene 2932242 2933192 . - . ID=gene-PUW38_14330;Name=PUW38_14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14330 CP118116.1 Protein Homology CDS 2932242 2933192 . - 0 ID=cds-WJG79968.1;Parent=gene-PUW38_14330;Dbxref=NCBI_GP:WJG79968.1;Name=WJG79968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=PUW38_14330;product=SDR family oxidoreductase;protein_id=WJG79968.1;transl_table=11 CP118116.1 Genbank gene 2933232 2934008 . - . ID=gene-PUW38_14335;Name=PUW38_14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14335 CP118116.1 Protein Homology CDS 2933232 2934008 . - 0 ID=cds-WJG79969.1;Parent=gene-PUW38_14335;Dbxref=NCBI_GP:WJG79969.1;Name=WJG79969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=PUW38_14335;product=HPr family phosphocarrier protein;protein_id=WJG79969.1;transl_table=11 CP118116.1 Genbank gene 2934013 2934651 . - . ID=gene-PUW38_14340;Name=PUW38_14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14340 CP118116.1 Protein Homology CDS 2934013 2934651 . - 0 ID=cds-WJG79970.1;Parent=gene-PUW38_14340;Dbxref=NCBI_GP:WJG79970.1;Name=WJG79970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=PUW38_14340;product=aldolase;protein_id=WJG79970.1;transl_table=11 CP118116.1 Genbank gene 2934648 2935910 . - . ID=gene-PUW38_14345;Name=PUW38_14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14345 CP118116.1 Protein Homology CDS 2934648 2935910 . - 0 ID=cds-WJG79971.1;Parent=gene-PUW38_14345;Dbxref=NCBI_GP:WJG79971.1;Name=WJG79971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=PUW38_14345;product=3-oxo-tetronate kinase;protein_id=WJG79971.1;transl_table=11 CP118116.1 Genbank gene 2935904 2936827 . - . ID=gene-PUW38_14350;Name=PUW38_14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14350 CP118116.1 Protein Homology CDS 2935904 2936827 . - 0 ID=cds-WJG79972.1;Parent=gene-PUW38_14350;Dbxref=NCBI_GP:WJG79972.1;Name=WJG79972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=PUW38_14350;product=NAD(P)-dependent oxidoreductase;protein_id=WJG79972.1;transl_table=11 CP118116.1 Genbank gene 2937024 2937788 . + . ID=gene-PUW38_14355;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=PUW38_14355 CP118116.1 Protein Homology CDS 2937024 2937788 . + 0 ID=cds-WJG79973.1;Parent=gene-PUW38_14355;Dbxref=NCBI_GP:WJG79973.1;Name=WJG79973.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=PUW38_14355;product=DNA-binding transcriptional repressor YgbI;protein_id=WJG79973.1;transl_table=11 CP118116.1 Genbank gene 2937807 2938211 . - . ID=gene-PUW38_14360;Name=PUW38_14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14360 CP118116.1 Protein Homology CDS 2937807 2938211 . - 0 ID=cds-WJG79974.1;Parent=gene-PUW38_14360;Dbxref=NCBI_GP:WJG79974.1;Name=WJG79974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=PUW38_14360;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WJG79974.1;transl_table=11 CP118116.1 Genbank gene 2938382 2938975 . + . ID=gene-PUW38_14365;Name=PUW38_14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14365 CP118116.1 Protein Homology CDS 2938382 2938975 . + 0 ID=cds-WJG79975.1;Parent=gene-PUW38_14365;Dbxref=NCBI_GP:WJG79975.1;Name=WJG79975.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=PUW38_14365;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WJG79975.1;transl_table=11 CP118116.1 Genbank gene 2938975 2940402 . + . ID=gene-PUW38_14370;Name=PUW38_14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14370 CP118116.1 Protein Homology CDS 2938975 2940402 . + 0 ID=cds-WJG79976.1;Parent=gene-PUW38_14370;Dbxref=NCBI_GP:WJG79976.1;Name=WJG79976.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=PUW38_14370;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WJG79976.1;transl_table=11 CP118116.1 Genbank gene 2940413 2940649 . + . ID=gene-PUW38_14375;Name=PUW38_14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14375 CP118116.1 Protein Homology CDS 2940413 2940649 . + 0 ID=cds-WJG79977.1;Parent=gene-PUW38_14375;Dbxref=NCBI_GP:WJG79977.1;Name=WJG79977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=PUW38_14375;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WJG79977.1;transl_table=11 CP118116.1 Genbank gene 2940694 2941686 . - . ID=gene-PUW38_14380;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=PUW38_14380 CP118116.1 Protein Homology CDS 2940694 2941686 . - 0 ID=cds-WJG79978.1;Parent=gene-PUW38_14380;Dbxref=NCBI_GP:WJG79978.1;Name=WJG79978.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=PUW38_14380;product=RNA polymerase sigma factor RpoS;protein_id=WJG79978.1;transl_table=11 CP118116.1 Genbank gene 2941749 2942831 . - . ID=gene-PUW38_14385;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=PUW38_14385 CP118116.1 Protein Homology CDS 2941749 2942831 . - 0 ID=cds-WJG83252.1;Parent=gene-PUW38_14385;Dbxref=NCBI_GP:WJG83252.1;Name=WJG83252.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=PUW38_14385;product=murein hydrolase activator NlpD;protein_id=WJG83252.1;transl_table=11 CP118116.1 Genbank gene 2942761 2942919 . + . ID=gene-PUW38_14390;Name=PUW38_14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14390 CP118116.1 Protein Homology CDS 2942761 2942919 . + 0 ID=cds-WJG83253.1;Parent=gene-PUW38_14390;Dbxref=NCBI_GP:WJG83253.1;Name=WJG83253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=PUW38_14390;product=peptidase;protein_id=WJG83253.1;transl_table=11 CP118116.1 Genbank gene 2943058 2943684 . - . ID=gene-PUW38_14395;Name=PUW38_14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14395 CP118116.1 Protein Homology CDS 2943058 2943684 . - 0 ID=cds-WJG79979.1;Parent=gene-PUW38_14395;Dbxref=NCBI_GP:WJG79979.1;Name=WJG79979.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=PUW38_14395;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WJG79979.1;transl_table=11 CP118116.1 Genbank gene 2943678 2944439 . - . ID=gene-PUW38_14400;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=PUW38_14400 CP118116.1 Protein Homology CDS 2943678 2944439 . - 0 ID=cds-WJG79980.1;Parent=gene-PUW38_14400;Dbxref=NCBI_GP:WJG79980.1;Name=WJG79980.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=PUW38_14400;product=5'/3'-nucleotidase SurE;protein_id=WJG79980.1;transl_table=11 CP118116.1 Genbank pseudogene 2944420 2945468 . - . ID=gene-PUW38_14405;Name=truD;gbkey=Gene;gene=truD;gene_biotype=pseudogene;locus_tag=PUW38_14405;pseudo=true CP118116.1 Protein Homology CDS 2944420 2945468 . - 0 ID=cds-PUW38_14405;Parent=gene-PUW38_14405;Note=frameshifted;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=PUW38_14405;product=tRNA pseudouridine(13) synthase TruD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2945465 2945944 . - . ID=gene-PUW38_14410;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=PUW38_14410 CP118116.1 Protein Homology CDS 2945465 2945944 . - 0 ID=cds-WJG79981.1;Parent=gene-PUW38_14410;Dbxref=NCBI_GP:WJG79981.1;Name=WJG79981.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=PUW38_14410;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WJG79981.1;transl_table=11 CP118116.1 Genbank gene 2945944 2946654 . - . ID=gene-PUW38_14415;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=PUW38_14415 CP118116.1 Protein Homology CDS 2945944 2946654 . - 0 ID=cds-WJG79982.1;Parent=gene-PUW38_14415;Dbxref=NCBI_GP:WJG79982.1;Name=WJG79982.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=PUW38_14415;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WJG79982.1;transl_table=11 CP118116.1 Genbank gene 2946673 2946984 . - . ID=gene-PUW38_14420;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=PUW38_14420 CP118116.1 Protein Homology CDS 2946673 2946984 . - 0 ID=cds-WJG79983.1;Parent=gene-PUW38_14420;Dbxref=NCBI_GP:WJG79983.1;Name=WJG79983.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=PUW38_14420;product=cell division protein FtsB;protein_id=WJG79983.1;transl_table=11 CP118116.1 Genbank gene 2947175 2947498 . - . ID=gene-PUW38_14425;Name=PUW38_14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14425 CP118116.1 Protein Homology CDS 2947175 2947498 . - 0 ID=cds-WJG79984.1;Parent=gene-PUW38_14425;Dbxref=NCBI_GP:WJG79984.1;Name=WJG79984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=PUW38_14425;product=DUF3561 family protein;protein_id=WJG79984.1;transl_table=11 CP118116.1 Genbank gene 2947549 2948154 . - . ID=gene-PUW38_14430;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=PUW38_14430 CP118116.1 Protein Homology CDS 2947549 2948154 . - 0 ID=cds-WJG79985.1;Parent=gene-PUW38_14430;Dbxref=NCBI_GP:WJG79985.1;Name=WJG79985.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=PUW38_14430;product=adenylyl-sulfate kinase;protein_id=WJG79985.1;transl_table=11 CP118116.1 Genbank gene 2948141 2949580 . - . ID=gene-PUW38_14435;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=PUW38_14435 CP118116.1 Protein Homology CDS 2948141 2949580 . - 0 ID=cds-WJG79986.1;Parent=gene-PUW38_14435;Dbxref=NCBI_GP:WJG79986.1;Name=WJG79986.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=PUW38_14435;product=sulfate adenylyltransferase subunit CysN;protein_id=WJG79986.1;transl_table=11 CP118116.1 Genbank gene 2949590 2950498 . - . ID=gene-PUW38_14440;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=PUW38_14440 CP118116.1 Protein Homology CDS 2949590 2950498 . - 0 ID=cds-WJG79987.1;Parent=gene-PUW38_14440;Dbxref=NCBI_GP:WJG79987.1;Name=WJG79987.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=PUW38_14440;product=sulfate adenylyltransferase subunit CysD;protein_id=WJG79987.1;transl_table=11 CP118116.1 Genbank gene 2950749 2951795 . + . ID=gene-PUW38_14445;Name=PUW38_14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14445 CP118116.1 Protein Homology CDS 2950749 2951795 . + 0 ID=cds-WJG79988.1;Parent=gene-PUW38_14445;Dbxref=NCBI_GP:WJG79988.1;Name=WJG79988.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=PUW38_14445;product=aminopeptidase;protein_id=WJG79988.1;transl_table=11 CP118116.1 Genbank gene 2952058 2952351 . - . ID=gene-PUW38_14450;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=PUW38_14450 CP118116.1 Protein Homology CDS 2952058 2952351 . - 0 ID=cds-WJG79989.1;Parent=gene-PUW38_14450;Dbxref=NCBI_GP:WJG79989.1;Name=WJG79989.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=PUW38_14450;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WJG79989.1;transl_table=11 CP118116.1 Genbank pseudogene 2952351 2953270 . - . ID=gene-PUW38_14455;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=pseudogene;locus_tag=PUW38_14455;pseudo=true CP118116.1 Protein Homology CDS 2952351 2953270 . - 0 ID=cds-PUW38_14455;Parent=gene-PUW38_14455;Note=frameshifted;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=PUW38_14455;product=type I-E CRISPR-associated endonuclease Cas1e;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2953267 2953917 . - . ID=gene-PUW38_14460;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=PUW38_14460 CP118116.1 Protein Homology CDS 2953267 2953917 . - 0 ID=cds-WJG79990.1;Parent=gene-PUW38_14460;Dbxref=NCBI_GP:WJG79990.1;Name=WJG79990.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas6e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=PUW38_14460;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WJG79990.1;transl_table=11 CP118116.1 Genbank gene 2953899 2954645 . - . ID=gene-PUW38_14465;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=PUW38_14465 CP118116.1 Protein Homology CDS 2953899 2954645 . - 0 ID=cds-WJG79991.1;Parent=gene-PUW38_14465;Dbxref=NCBI_GP:WJG79991.1;Name=WJG79991.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas5e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=PUW38_14465;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WJG79991.1;transl_table=11 CP118116.1 Genbank gene 2954656 2955714 . - . ID=gene-PUW38_14470;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=PUW38_14470 CP118116.1 Protein Homology CDS 2954656 2955714 . - 0 ID=cds-WJG79992.1;Parent=gene-PUW38_14470;Dbxref=NCBI_GP:WJG79992.1;Name=WJG79992.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=PUW38_14470;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WJG79992.1;transl_table=11 CP118116.1 Genbank gene 2955728 2956282 . - . ID=gene-PUW38_14475;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=PUW38_14475 CP118116.1 Protein Homology CDS 2955728 2956282 . - 0 ID=cds-WJG79993.1;Parent=gene-PUW38_14475;Dbxref=NCBI_GP:WJG79993.1;Name=WJG79993.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casB;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=PUW38_14475;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WJG79993.1;transl_table=11 CP118116.1 Genbank gene 2956279 2957835 . - . ID=gene-PUW38_14480;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=PUW38_14480 CP118116.1 Protein Homology CDS 2956279 2957835 . - 0 ID=cds-WJG79994.1;Parent=gene-PUW38_14480;Dbxref=NCBI_GP:WJG79994.1;Name=WJG79994.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=PUW38_14480;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WJG79994.1;transl_table=11 CP118116.1 Genbank pseudogene 2957847 2960510 . - . ID=gene-PUW38_14485;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=pseudogene;locus_tag=PUW38_14485;pseudo=true CP118116.1 Protein Homology CDS 2957847 2960510 . - 0 ID=cds-PUW38_14485;Parent=gene-PUW38_14485;Note=internal stop;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=PUW38_14485;product=CRISPR-associated helicase Cas3';pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2960955 2961907 . + . ID=gene-PUW38_14490;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=pseudogene;locus_tag=PUW38_14490;pseudo=true CP118116.1 Protein Homology CDS 2960955 2961907 . + 0 ID=cds-PUW38_14490;Parent=gene-PUW38_14490;Note=frameshifted;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=PUW38_14490;product=SPI-1 type III secretion system effector SopD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2961995 2962729 . - . ID=gene-PUW38_14495;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=PUW38_14495 CP118116.1 Protein Homology CDS 2961995 2962729 . - 0 ID=cds-WJG79995.1;Parent=gene-PUW38_14495;Dbxref=NCBI_GP:WJG79995.1;Name=WJG79995.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=PUW38_14495;product=phosphoadenosine phosphosulfate reductase;protein_id=WJG79995.1;transl_table=11 CP118116.1 Genbank pseudogene 2962831 2964542 . - . ID=gene-PUW38_14500;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=pseudogene;locus_tag=PUW38_14500;pseudo=true CP118116.1 Protein Homology CDS 2962831 2964542 . - 0 ID=cds-PUW38_14500;Parent=gene-PUW38_14500;Note=frameshifted;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=PUW38_14500;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2964542 2966340 . - . ID=gene-PUW38_14505;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=pseudogene;locus_tag=PUW38_14505;pseudo=true CP118116.1 Protein Homology CDS 2964542 2966340 . - 0 ID=cds-PUW38_14505;Parent=gene-PUW38_14505;Note=frameshifted;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=PUW38_14505;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2966764 2967126 . + . ID=gene-PUW38_14510;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=PUW38_14510 CP118116.1 Protein Homology CDS 2966764 2967126 . + 0 ID=cds-WJG79996.1;Parent=gene-PUW38_14510;Dbxref=NCBI_GP:WJG79996.1;Name=WJG79996.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=PUW38_14510;product=6-carboxytetrahydropterin synthase QueD;protein_id=WJG79996.1;transl_table=11 CP118116.1 Genbank gene 2967214 2968011 . - . ID=gene-PUW38_14515;Name=PUW38_14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14515 CP118116.1 Protein Homology CDS 2967214 2968011 . - 0 ID=cds-WJG79997.1;Parent=gene-PUW38_14515;Dbxref=NCBI_GP:WJG79997.1;Name=WJG79997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=PUW38_14515;product=MBL fold metallo-hydrolase;protein_id=WJG79997.1;transl_table=11 CP118116.1 Genbank direct_repeat 2968111 2968746 . + . ID=id-CP118116.1:2968111..2968746;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=2968172..2968198;rpt_unit_seq=gtttatccccgctggcgcggggaacac CP118116.1 Genbank gene 2969043 2969714 . - . ID=gene-PUW38_14520;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=PUW38_14520 CP118116.1 Protein Homology CDS 2969043 2969714 . - 0 ID=cds-WJG79998.1;Parent=gene-PUW38_14520;Dbxref=NCBI_GP:WJG79998.1;Name=WJG79998.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=PUW38_14520;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WJG79998.1;transl_table=11 CP118116.1 Genbank gene 2969850 2971148 . - . ID=gene-PUW38_14525;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=PUW38_14525 CP118116.1 Protein Homology CDS 2969850 2971148 . - 0 ID=cds-WJG79999.1;Parent=gene-PUW38_14525;Dbxref=NCBI_GP:WJG79999.1;Name=WJG79999.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=PUW38_14525;product=phosphopyruvate hydratase;protein_id=WJG79999.1;transl_table=11 CP118116.1 Genbank gene 2971231 2972868 . - . ID=gene-PUW38_14530;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=PUW38_14530 CP118116.1 Protein Homology CDS 2971231 2972868 . - 0 ID=cds-WJG80000.1;Parent=gene-PUW38_14530;Dbxref=NCBI_GP:WJG80000.1;Name=WJG80000.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=PUW38_14530;product=CTP synthase (glutamine hydrolyzing);protein_id=WJG80000.1;transl_table=11 CP118116.1 Genbank gene 2973096 2973896 . - . ID=gene-PUW38_14535;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=PUW38_14535 CP118116.1 Protein Homology CDS 2973096 2973896 . - 0 ID=cds-WJG80001.1;Parent=gene-PUW38_14535;Dbxref=NCBI_GP:WJG80001.1;Name=WJG80001.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=PUW38_14535;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WJG80001.1;transl_table=11 CP118116.1 Genbank gene 2974506 2975093 . + . ID=gene-PUW38_14540;Name=PUW38_14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14540 CP118116.1 Protein Homology CDS 2974506 2975093 . + 0 ID=cds-WJG80002.1;Parent=gene-PUW38_14540;Dbxref=NCBI_GP:WJG80002.1;Name=WJG80002.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=PUW38_14540;product=fimbrial protein;protein_id=WJG80002.1;transl_table=11 CP118116.1 Genbank gene 2975227 2977578 . + . ID=gene-PUW38_14545;Name=PUW38_14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14545 CP118116.1 Protein Homology CDS 2975227 2977578 . + 0 ID=cds-WJG80003.1;Parent=gene-PUW38_14545;Dbxref=NCBI_GP:WJG80003.1;Name=WJG80003.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011804.0;locus_tag=PUW38_14545;product=fimbrial biogenesis outer membrane usher protein;protein_id=WJG80003.1;transl_table=11 CP118116.1 Genbank gene 2977542 2977871 . + . ID=gene-PUW38_14550;Name=PUW38_14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14550 CP118116.1 GeneMarkS-2+ CDS 2977542 2977871 . + 0 ID=cds-WJG80004.1;Parent=gene-PUW38_14550;Dbxref=NCBI_GP:WJG80004.1;Name=WJG80004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_14550;product=hypothetical protein;protein_id=WJG80004.1;transl_table=11 CP118116.1 Genbank gene 2977884 2978657 . + . ID=gene-PUW38_14555;Name=PUW38_14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14555 CP118116.1 Protein Homology CDS 2977884 2978657 . + 0 ID=cds-WJG80005.1;Parent=gene-PUW38_14555;Dbxref=NCBI_GP:WJG80005.1;Name=WJG80005.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=PUW38_14555;product=fimbria/pilus periplasmic chaperone;protein_id=WJG80005.1;transl_table=11 CP118116.1 Genbank gene 2978677 2979180 . + . ID=gene-PUW38_14560;Name=PUW38_14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14560 CP118116.1 Protein Homology CDS 2978677 2979180 . + 0 ID=cds-WJG80006.1;Parent=gene-PUW38_14560;Dbxref=NCBI_GP:WJG80006.1;Name=WJG80006.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=PUW38_14560;product=fimbrial protein;protein_id=WJG80006.1;transl_table=11 CP118116.1 Genbank gene 2979195 2979665 . + . ID=gene-PUW38_14565;Name=PUW38_14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14565 CP118116.1 Protein Homology CDS 2979195 2979665 . + 0 ID=cds-WJG80007.1;Parent=gene-PUW38_14565;Dbxref=NCBI_GP:WJG80007.1;Name=WJG80007.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=PUW38_14565;product=fimbrial protein;protein_id=WJG80007.1;transl_table=11 CP118116.1 Genbank gene 2979662 2980198 . + . ID=gene-PUW38_14570;Name=PUW38_14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14570 CP118116.1 Protein Homology CDS 2979662 2980198 . + 0 ID=cds-WJG80008.1;Parent=gene-PUW38_14570;Dbxref=NCBI_GP:WJG80008.1;Name=WJG80008.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=PUW38_14570;product=fimbrial protein;protein_id=WJG80008.1;transl_table=11 CP118116.1 Genbank gene 2980253 2981284 . + . ID=gene-PUW38_14575;Name=PUW38_14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14575 CP118116.1 Protein Homology CDS 2980253 2981284 . + 0 ID=cds-WJG80009.1;Parent=gene-PUW38_14575;Dbxref=NCBI_GP:WJG80009.1;Name=WJG80009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750138.1;locus_tag=PUW38_14575;product=hypothetical protein;protein_id=WJG80009.1;transl_table=11 CP118116.1 Genbank gene 2981634 2983868 . - . ID=gene-PUW38_14580;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=PUW38_14580 CP118116.1 Protein Homology CDS 2981634 2983868 . - 0 ID=cds-WJG80010.1;Parent=gene-PUW38_14580;Dbxref=NCBI_GP:WJG80010.1;Name=WJG80010.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=PUW38_14580;product=GTP diphosphokinase;protein_id=WJG80010.1;transl_table=11 CP118116.1 Genbank gene 2983920 2985215 . - . ID=gene-PUW38_14585;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=PUW38_14585 CP118116.1 Protein Homology CDS 2983920 2985215 . - 0 ID=cds-WJG80011.1;Parent=gene-PUW38_14585;Dbxref=NCBI_GP:WJG80011.1;Name=WJG80011.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=PUW38_14585;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WJG80011.1;transl_table=11 CP118116.1 Genbank gene 2985273 2988029 . + . ID=gene-PUW38_14590;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=PUW38_14590 CP118116.1 Protein Homology CDS 2985273 2988029 . + 0 ID=cds-WJG80012.1;Parent=gene-PUW38_14590;Dbxref=NCBI_GP:WJG80012.1;Name=WJG80012.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=PUW38_14590;product=two-component sensor histidine kinase BarA;protein_id=WJG80012.1;transl_table=11 CP118116.1 Genbank pseudogene 2988073 2989214 . - . ID=gene-PUW38_14595;Name=PUW38_14595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_14595;pseudo=true CP118116.1 Protein Homology CDS 2988073 2989214 . - 0 ID=cds-PUW38_14595;Parent=gene-PUW38_14595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=PUW38_14595;product=glycerate kinase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2989292 2990631 . - . ID=gene-PUW38_14600;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=pseudogene;locus_tag=PUW38_14600;pseudo=true CP118116.1 Protein Homology CDS 2989292 2990631 . - 0 ID=cds-PUW38_14600;Parent=gene-PUW38_14600;Note=frameshifted%3B internal stop;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=PUW38_14600;product=glucarate dehydratase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 2990652 2991993 . - . ID=gene-PUW38_14605;Name=PUW38_14605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_14605;pseudo=true CP118116.1 Protein Homology CDS 2990652 2991993 . - 0 ID=cds-PUW38_14605;Parent=gene-PUW38_14605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=PUW38_14605;product=enolase C-terminal domain-like protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 2991990 2993348 . - . ID=gene-PUW38_14610;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=PUW38_14610 CP118116.1 Protein Homology CDS 2991990 2993348 . - 0 ID=cds-WJG80013.1;Parent=gene-PUW38_14610;Dbxref=NCBI_GP:WJG80013.1;Name=WJG80013.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=PUW38_14610;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WJG80013.1;transl_table=11 CP118116.1 Genbank gene 2993431 2993679 . + . ID=gene-PUW38_14615;Name=PUW38_14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14615 CP118116.1 GeneMarkS-2+ CDS 2993431 2993679 . + 0 ID=cds-WJG80014.1;Parent=gene-PUW38_14615;Dbxref=NCBI_GP:WJG80014.1;Name=WJG80014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_14615;product=hypothetical protein;protein_id=WJG80014.1;transl_table=11 CP118116.1 Genbank gene 2993829 2994278 . - . ID=gene-PUW38_14620;Name=PUW38_14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14620 CP118116.1 Protein Homology CDS 2993829 2994278 . - 0 ID=cds-WJG80015.1;Parent=gene-PUW38_14620;Dbxref=NCBI_GP:WJG80015.1;Name=WJG80015.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=PUW38_14620;product=flavodoxin;protein_id=WJG80015.1;transl_table=11 CP118116.1 Genbank gene 2994297 2995079 . - . ID=gene-PUW38_14625;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=PUW38_14625 CP118116.1 Protein Homology CDS 2994297 2995079 . - 0 ID=cds-WJG80016.1;Parent=gene-PUW38_14625;Dbxref=NCBI_GP:WJG80016.1;Name=WJG80016.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=PUW38_14625;product=tRNA pseudouridine(65) synthase TruC;protein_id=WJG80016.1;transl_table=11 CP118116.1 Genbank gene 2995079 2995408 . - . ID=gene-PUW38_14630;Name=PUW38_14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14630 CP118116.1 Protein Homology CDS 2995079 2995408 . - 0 ID=cds-WJG80017.1;Parent=gene-PUW38_14630;Dbxref=NCBI_GP:WJG80017.1;Name=WJG80017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=PUW38_14630;product=YqcC family protein;protein_id=WJG80017.1;transl_table=11 CP118116.1 Genbank gene 2996020 2996565 . - . ID=gene-PUW38_14635;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=PUW38_14635 CP118116.1 Protein Homology CDS 2996020 2996565 . - 0 ID=cds-WJG80018.1;Parent=gene-PUW38_14635;Dbxref=NCBI_GP:WJG80018.1;Name=WJG80018.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=PUW38_14635;product=SecY-interacting protein;protein_id=WJG80018.1;transl_table=11 CP118116.1 Genbank gene 2996634 2997482 . + . ID=gene-PUW38_14640;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=PUW38_14640 CP118116.1 Protein Homology CDS 2996634 2997482 . + 0 ID=cds-WJG80019.1;Parent=gene-PUW38_14640;Dbxref=NCBI_GP:WJG80019.1;Name=WJG80019.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=PUW38_14640;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WJG80019.1;transl_table=11 CP118116.1 Genbank gene 2997595 2998959 . + . ID=gene-PUW38_14645;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=PUW38_14645 CP118116.1 Protein Homology CDS 2997595 2998959 . + 0 ID=cds-WJG80020.1;Parent=gene-PUW38_14645;Dbxref=NCBI_GP:WJG80020.1;Name=WJG80020.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=PUW38_14645;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WJG80020.1;transl_table=11 CP118116.1 Genbank gene 2999524 3000813 . + . ID=gene-PUW38_14650;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=PUW38_14650 CP118116.1 Protein Homology CDS 2999524 3000813 . + 0 ID=cds-WJG80021.1;Parent=gene-PUW38_14650;Dbxref=NCBI_GP:WJG80021.1;Name=WJG80021.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=PUW38_14650;product=HAAAP family serine/threonine permease SdaC;protein_id=WJG80021.1;transl_table=11 CP118116.1 Genbank gene 3000872 3002239 . + . ID=gene-PUW38_14655;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=PUW38_14655 CP118116.1 Protein Homology CDS 3000872 3002239 . + 0 ID=cds-WJG80022.1;Parent=gene-PUW38_14655;Dbxref=NCBI_GP:WJG80022.1;Name=WJG80022.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=PUW38_14655;product=L-serine ammonia-lyase II;protein_id=WJG80022.1;transl_table=11 CP118116.1 Genbank gene 3002409 3003164 . + . ID=gene-PUW38_14660;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=PUW38_14660 CP118116.1 Protein Homology CDS 3002409 3003164 . + 0 ID=cds-WJG80023.1;Parent=gene-PUW38_14660;Dbxref=NCBI_GP:WJG80023.1;Name=WJG80023.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=PUW38_14660;product=flap endonuclease Xni;protein_id=WJG80023.1;transl_table=11 CP118116.1 Genbank pseudogene 3003256 3004403 . - . ID=gene-PUW38_14665;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=pseudogene;locus_tag=PUW38_14665;pseudo=true CP118116.1 Protein Homology CDS 3003256 3004403 . - 0 ID=cds-PUW38_14665;Parent=gene-PUW38_14665;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=PUW38_14665;product=lactaldehyde reductase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3004420 3005066 . - . ID=gene-PUW38_14670;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=pseudogene;locus_tag=PUW38_14670;pseudo=true CP118116.1 Protein Homology CDS 3004420 3005066 . - 0 ID=cds-PUW38_14670;Parent=gene-PUW38_14670;Note=frameshifted;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=PUW38_14670;product=L-fuculose-phosphate aldolase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3005621 3006937 . + . ID=gene-PUW38_14675;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PUW38_14675 CP118116.1 Protein Homology CDS 3005621 3006937 . + 0 ID=cds-WJG80024.1;Parent=gene-PUW38_14675;Dbxref=NCBI_GP:WJG80024.1;Name=WJG80024.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=PUW38_14675;product=L-fucose:H+ symporter permease;protein_id=WJG80024.1;transl_table=11 CP118116.1 Genbank pseudogene 3006969 3008743 . + . ID=gene-PUW38_14680;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=pseudogene;locus_tag=PUW38_14680;pseudo=true CP118116.1 Protein Homology CDS 3006969 3008743 . + 0 ID=cds-PUW38_14680;Parent=gene-PUW38_14680;Note=frameshifted;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=PUW38_14680;product=L-fucose isomerase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3008844 3010262 . + . ID=gene-PUW38_14685;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=PUW38_14685 CP118116.1 Protein Homology CDS 3008844 3010262 . + 0 ID=cds-WJG80025.1;Parent=gene-PUW38_14685;Dbxref=NCBI_GP:WJG80025.1;Name=WJG80025.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=PUW38_14685;product=L-fuculokinase;protein_id=WJG80025.1;transl_table=11 CP118116.1 Genbank gene 3010264 3010686 . + . ID=gene-PUW38_14690;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=PUW38_14690 CP118116.1 Protein Homology CDS 3010264 3010686 . + 0 ID=cds-WJG80026.1;Parent=gene-PUW38_14690;Dbxref=NCBI_GP:WJG80026.1;Name=WJG80026.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=PUW38_14690;product=L-fucose mutarotase;protein_id=WJG80026.1;transl_table=11 CP118116.1 Genbank gene 3010744 3011454 . + . ID=gene-PUW38_14695;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=PUW38_14695 CP118116.1 Protein Homology CDS 3010744 3011454 . + 0 ID=cds-WJG80027.1;Parent=gene-PUW38_14695;Dbxref=NCBI_GP:WJG80027.1;Name=WJG80027.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=PUW38_14695;product=L-fucose operon activator;protein_id=WJG80027.1;transl_table=11 CP118116.1 Genbank gene 3011513 3012613 . - . ID=gene-PUW38_14700;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=PUW38_14700 CP118116.1 Protein Homology CDS 3011513 3012613 . - 0 ID=cds-WJG80028.1;Parent=gene-PUW38_14700;Dbxref=NCBI_GP:WJG80028.1;Name=WJG80028.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=PUW38_14700;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WJG80028.1;transl_table=11 CP118116.1 Genbank gene 3012606 3013001 . - . ID=gene-PUW38_14705;Name=PUW38_14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14705 CP118116.1 Protein Homology CDS 3012606 3013001 . - 0 ID=cds-WJG80029.1;Parent=gene-PUW38_14705;Dbxref=NCBI_GP:WJG80029.1;Name=WJG80029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=PUW38_14705;product=DUF423 domain-containing protein;protein_id=WJG80029.1;transl_table=11 CP118116.1 Genbank gene 3013020 3013937 . - . ID=gene-PUW38_14710;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=PUW38_14710 CP118116.1 Protein Homology CDS 3013020 3013937 . - 0 ID=cds-WJG80030.1;Parent=gene-PUW38_14710;Dbxref=NCBI_GP:WJG80030.1;Name=WJG80030.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=PUW38_14710;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WJG80030.1;transl_table=11 CP118116.1 Genbank gene 3014284 3014511 . - . ID=gene-PUW38_14715;Name=PUW38_14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14715 CP118116.1 Protein Homology CDS 3014284 3014511 . - 0 ID=cds-WJG80031.1;Parent=gene-PUW38_14715;Dbxref=NCBI_GP:WJG80031.1;Name=WJG80031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=PUW38_14715;product=YgdI/YgdR family lipoprotein;protein_id=WJG80031.1;transl_table=11 CP118116.1 Genbank gene 3014704 3015909 . + . ID=gene-PUW38_14720;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=PUW38_14720 CP118116.1 Protein Homology CDS 3014704 3015909 . + 0 ID=cds-WJG80032.1;Parent=gene-PUW38_14720;Dbxref=NCBI_GP:WJG80032.1;Name=WJG80032.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=PUW38_14720;product=cysteine desulfurase CsdA;protein_id=WJG80032.1;transl_table=11 CP118116.1 Genbank gene 3015909 3016352 . + . ID=gene-PUW38_14725;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=PUW38_14725 CP118116.1 Protein Homology CDS 3015909 3016352 . + 0 ID=cds-WJG80033.1;Parent=gene-PUW38_14725;Dbxref=NCBI_GP:WJG80033.1;Name=WJG80033.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=PUW38_14725;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WJG80033.1;transl_table=11 CP118116.1 Genbank gene 3016652 3017539 . + . ID=gene-PUW38_14730;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PUW38_14730 CP118116.1 Protein Homology CDS 3016652 3017539 . + 0 ID=cds-WJG83254.1;Parent=gene-PUW38_14730;Dbxref=NCBI_GP:WJG83254.1;Name=WJG83254.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=PUW38_14730;product=EamA family transporter RarD;protein_id=WJG83254.1;transl_table=11 CP118116.1 Genbank gene 3017591 3018397 . - . ID=gene-PUW38_14735;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=PUW38_14735 CP118116.1 Protein Homology CDS 3017591 3018397 . - 0 ID=cds-WJG80034.1;Parent=gene-PUW38_14735;Dbxref=NCBI_GP:WJG80034.1;Name=WJG80034.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=PUW38_14735;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WJG80034.1;transl_table=11 CP118116.1 Genbank gene 3018507 3019604 . - . ID=gene-PUW38_14740;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=PUW38_14740 CP118116.1 Protein Homology CDS 3018507 3019604 . - 0 ID=cds-WJG80035.1;Parent=gene-PUW38_14740;Dbxref=NCBI_GP:WJG80035.1;Name=WJG80035.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=PUW38_14740;product=murein transglycosylase A;protein_id=WJG80035.1;transl_table=11 CP118116.1 Genbank gene 3019812 3019888 . + . ID=gene-PUW38_14745;Name=PUW38_14745;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_14745 CP118116.1 tRNAscan-SE tRNA 3019812 3019888 . + . ID=rna-PUW38_14745;Parent=gene-PUW38_14745;anticodon=(pos:3019846..3019848);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_14745;product=tRNA-Met CP118116.1 tRNAscan-SE exon 3019812 3019888 . + . ID=exon-PUW38_14745-1;Parent=rna-PUW38_14745;anticodon=(pos:3019846..3019848);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_14745;product=tRNA-Met CP118116.1 Genbank gene 3019918 3019994 . + . ID=gene-PUW38_14750;Name=PUW38_14750;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_14750 CP118116.1 tRNAscan-SE tRNA 3019918 3019994 . + . ID=rna-PUW38_14750;Parent=gene-PUW38_14750;anticodon=(pos:3019952..3019954);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_14750;product=tRNA-Met CP118116.1 tRNAscan-SE exon 3019918 3019994 . + . ID=exon-PUW38_14750-1;Parent=rna-PUW38_14750;anticodon=(pos:3019952..3019954);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_14750;product=tRNA-Met CP118116.1 Genbank gene 3020104 3021357 . - . ID=gene-PUW38_14755;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=PUW38_14755 CP118116.1 Protein Homology CDS 3020104 3021357 . - 0 ID=cds-WJG80036.1;Parent=gene-PUW38_14755;Dbxref=NCBI_GP:WJG80036.1;Name=WJG80036.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=PUW38_14755;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WJG80036.1;transl_table=11 CP118116.1 Genbank gene 3021590 3022921 . + . ID=gene-PUW38_14760;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=PUW38_14760 CP118116.1 Protein Homology CDS 3021590 3022921 . + 0 ID=cds-WJG80037.1;Parent=gene-PUW38_14760;Dbxref=NCBI_GP:WJG80037.1;Name=WJG80037.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=PUW38_14760;product=amino-acid N-acetyltransferase;protein_id=WJG80037.1;transl_table=11 CP118116.1 Genbank gene 3023024 3024859 . - . ID=gene-PUW38_14765;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=PUW38_14765 CP118116.1 Protein Homology CDS 3023024 3024859 . - 0 ID=cds-WJG80038.1;Parent=gene-PUW38_14765;Dbxref=NCBI_GP:WJG80038.1;Name=WJG80038.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=PUW38_14765;product=exodeoxyribonuclease V subunit alpha;protein_id=WJG80038.1;transl_table=11 CP118116.1 Genbank gene 3024856 3028401 . - . ID=gene-PUW38_14770;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=PUW38_14770 CP118116.1 Protein Homology CDS 3024856 3028401 . - 0 ID=cds-WJG80039.1;Parent=gene-PUW38_14770;Dbxref=NCBI_GP:WJG80039.1;Name=WJG80039.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=PUW38_14770;product=exodeoxyribonuclease V subunit beta;protein_id=WJG80039.1;transl_table=11 CP118116.1 Genbank gene 3028394 3031282 . - . ID=gene-PUW38_14775;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=PUW38_14775 CP118116.1 Protein Homology CDS 3028394 3031282 . - 0 ID=cds-WJG80040.1;Parent=gene-PUW38_14775;Dbxref=NCBI_GP:WJG80040.1;Name=WJG80040.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=PUW38_14775;product=pitrilysin;protein_id=WJG80040.1;transl_table=11 CP118116.1 Genbank gene 3031460 3031969 . - . ID=gene-PUW38_14780;Name=PUW38_14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14780 CP118116.1 Protein Homology CDS 3031460 3031969 . - 0 ID=cds-WJG83255.1;Parent=gene-PUW38_14780;Dbxref=NCBI_GP:WJG83255.1;Name=WJG83255.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037683.2;locus_tag=PUW38_14780;product=hypothetical protein;protein_id=WJG83255.1;transl_table=11 CP118116.1 Genbank pseudogene 3031867 3034782 . - . ID=gene-PUW38_14785;Name=recC;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=PUW38_14785;pseudo=true CP118116.1 Protein Homology CDS 3031867 3034782 . - 0 ID=cds-PUW38_14785;Parent=gene-PUW38_14785;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: protein motif:HMM:NF008289.0;locus_tag=PUW38_14785;product=exodeoxyribonuclease V subunit gamma;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3034846 3035166 . - . ID=gene-PUW38_14790;Name=PUW38_14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14790 CP118116.1 Protein Homology CDS 3034846 3035166 . - 0 ID=cds-WJG80041.1;Parent=gene-PUW38_14790;Dbxref=NCBI_GP:WJG80041.1;Name=WJG80041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=PUW38_14790;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WJG80041.1;transl_table=11 CP118116.1 Genbank gene 3035151 3035558 . - . ID=gene-PUW38_14795;Name=PUW38_14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14795 CP118116.1 Protein Homology CDS 3035151 3035558 . - 0 ID=cds-WJG80042.1;Parent=gene-PUW38_14795;Dbxref=NCBI_GP:WJG80042.1;Name=WJG80042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=PUW38_14795;product=DUF2509 family protein;protein_id=WJG80042.1;transl_table=11 CP118116.1 Genbank gene 3035555 3036118 . - . ID=gene-PUW38_14800;Name=PUW38_14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14800 CP118116.1 Protein Homology CDS 3035555 3036118 . - 0 ID=cds-WJG80043.1;Parent=gene-PUW38_14800;Dbxref=NCBI_GP:WJG80043.1;Name=WJG80043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=PUW38_14800;product=prepilin peptidase-dependent protein;protein_id=WJG80043.1;transl_table=11 CP118116.1 Genbank gene 3036109 3036579 . - . ID=gene-PUW38_14805;Name=PUW38_14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14805 CP118116.1 Protein Homology CDS 3036109 3036579 . - 0 ID=cds-WJG80044.1;Parent=gene-PUW38_14805;Dbxref=NCBI_GP:WJG80044.1;Name=WJG80044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=PUW38_14805;product=prepilin peptidase-dependent protein;protein_id=WJG80044.1;transl_table=11 CP118116.1 Genbank gene 3036763 3037557 . - . ID=gene-PUW38_14810;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=PUW38_14810 CP118116.1 Protein Homology CDS 3036763 3037557 . - 0 ID=cds-WJG80045.1;Parent=gene-PUW38_14810;Dbxref=NCBI_GP:WJG80045.1;Name=WJG80045.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=PUW38_14810;product=thymidylate synthase;protein_id=WJG80045.1;transl_table=11 CP118116.1 Genbank gene 3037564 3038439 . - . ID=gene-PUW38_14815;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=PUW38_14815 CP118116.1 Protein Homology CDS 3037564 3038439 . - 0 ID=cds-WJG80046.1;Parent=gene-PUW38_14815;Dbxref=NCBI_GP:WJG80046.1;Name=WJG80046.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=PUW38_14815;product=prolipoprotein diacylglyceryl transferase;protein_id=WJG80046.1;transl_table=11 CP118116.1 Genbank gene 3038655 3040901 . - . ID=gene-PUW38_14820;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PUW38_14820 CP118116.1 Protein Homology CDS 3038655 3040901 . - 0 ID=cds-WJG80047.1;Parent=gene-PUW38_14820;Dbxref=NCBI_GP:WJG80047.1;Name=WJG80047.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=PUW38_14820;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WJG80047.1;transl_table=11 CP118116.1 Genbank gene 3040914 3041444 . - . ID=gene-PUW38_14825;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=PUW38_14825 CP118116.1 Protein Homology CDS 3040914 3041444 . - 0 ID=cds-WJG80048.1;Parent=gene-PUW38_14825;Dbxref=NCBI_GP:WJG80048.1;Name=WJG80048.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=PUW38_14825;product=RNA pyrophosphohydrolase;protein_id=WJG80048.1;transl_table=11 CP118116.1 Genbank gene 3042127 3042822 . + . ID=gene-PUW38_14830;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=PUW38_14830 CP118116.1 Protein Homology CDS 3042127 3042822 . + 0 ID=cds-WJG80049.1;Parent=gene-PUW38_14830;Dbxref=NCBI_GP:WJG80049.1;Name=WJG80049.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=PUW38_14830;product=DNA mismatch repair endonuclease MutH;protein_id=WJG80049.1;transl_table=11 CP118116.1 Genbank gene 3043004 3043717 . + . ID=gene-PUW38_14835;Name=PUW38_14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14835 CP118116.1 Protein Homology CDS 3043004 3043717 . + 0 ID=cds-WJG80050.1;Parent=gene-PUW38_14835;Dbxref=NCBI_GP:WJG80050.1;Name=WJG80050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=PUW38_14835;product=TerC family protein;protein_id=WJG80050.1;transl_table=11 CP118116.1 Genbank gene 3043861 3044079 . + . ID=gene-PUW38_14840;Name=PUW38_14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14840 CP118116.1 Protein Homology CDS 3043861 3044079 . + 0 ID=cds-WJG80051.1;Parent=gene-PUW38_14840;Dbxref=NCBI_GP:WJG80051.1;Name=WJG80051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=PUW38_14840;product=YgdI/YgdR family lipoprotein;protein_id=WJG80051.1;transl_table=11 CP118116.1 Genbank gene 3044270 3045310 . + . ID=gene-PUW38_14845;Name=PUW38_14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14845 CP118116.1 Protein Homology CDS 3044270 3045310 . + 0 ID=cds-WJG80052.1;Parent=gene-PUW38_14845;Dbxref=NCBI_GP:WJG80052.1;Name=WJG80052.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=PUW38_14845;product=NADP(H)-dependent aldo-keto reductase;protein_id=WJG80052.1;transl_table=11 CP118116.1 Genbank gene 3045397 3046599 . - . ID=gene-PUW38_14850;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=PUW38_14850 CP118116.1 Protein Homology CDS 3045397 3046599 . - 0 ID=cds-WJG80053.1;Parent=gene-PUW38_14850;Dbxref=NCBI_GP:WJG80053.1;Name=WJG80053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=PUW38_14850;product=lysophospholipid transporter LplT;protein_id=WJG80053.1;transl_table=11 CP118116.1 Genbank gene 3046592 3048751 . - . ID=gene-PUW38_14855;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=PUW38_14855 CP118116.1 Protein Homology CDS 3046592 3048751 . - 0 ID=cds-WJG80054.1;Parent=gene-PUW38_14855;Dbxref=NCBI_GP:WJG80054.1;Name=WJG80054.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=PUW38_14855;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WJG80054.1;transl_table=11 CP118116.1 Genbank gene 3049344 3050372 . + . ID=gene-PUW38_14860;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=PUW38_14860 CP118116.1 Protein Homology CDS 3049344 3050372 . + 0 ID=cds-WJG80055.1;Parent=gene-PUW38_14860;Dbxref=NCBI_GP:WJG80055.1;Name=WJG80055.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=PUW38_14860;product=HTH-type transcriptional regulator GalR;protein_id=WJG80055.1;transl_table=11 CP118116.1 Genbank gene 3050383 3051405 . + . ID=gene-PUW38_14865;Name=PUW38_14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14865 CP118116.1 Protein Homology CDS 3050383 3051405 . + 0 ID=cds-WJG83256.1;Parent=gene-PUW38_14865;Dbxref=NCBI_GP:WJG83256.1;Name=WJG83256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=PUW38_14865;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG83256.1;transl_table=11 CP118116.1 Genbank pseudogene 3051415 3052676 . - . ID=gene-PUW38_14870;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=pseudogene;locus_tag=PUW38_14870;pseudo=true CP118116.1 Protein Homology CDS 3051415 3052676 . - 0 ID=cds-PUW38_14870;Parent=gene-PUW38_14870;Note=frameshifted;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=PUW38_14870;product=diaminopimelate decarboxylase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3052794 3053729 . + . ID=gene-PUW38_14875;Name=PUW38_14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14875 CP118116.1 Protein Homology CDS 3052794 3053729 . + 0 ID=cds-WJG80056.1;Parent=gene-PUW38_14875;Dbxref=NCBI_GP:WJG80056.1;Name=WJG80056.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=PUW38_14875;product=LysR family transcriptional regulator;protein_id=WJG80056.1;transl_table=11 CP118116.1 Genbank gene 3053701 3054408 . - . ID=gene-PUW38_14880;Name=PUW38_14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14880 CP118116.1 Protein Homology CDS 3053701 3054408 . - 0 ID=cds-WJG80057.1;Parent=gene-PUW38_14880;Dbxref=NCBI_GP:WJG80057.1;Name=WJG80057.1;Ontology_term=GO:0006807,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=PUW38_14880;product=aspartate/glutamate racemase;protein_id=WJG80057.1;transl_table=11 CP118116.1 Genbank pseudogene 3054521 3055934 . - . ID=gene-PUW38_14885;Name=araE;gbkey=Gene;gene=araE;gene_biotype=pseudogene;locus_tag=PUW38_14885;pseudo=true CP118116.1 Protein Homology CDS 3054521 3055934 . - 0 ID=cds-PUW38_14885;Parent=gene-PUW38_14885;Note=frameshifted;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=PUW38_14885;product=arabinose-proton symporter AraE;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3056288 3057049 . - . ID=gene-PUW38_14890;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=pseudogene;locus_tag=PUW38_14890;pseudo=true CP118116.1 Protein Homology CDS 3056288 3057049 . - 0 ID=cds-PUW38_14890;Parent=gene-PUW38_14890;Note=internal stop;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=PUW38_14890;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3057106 3057942 . - . ID=gene-PUW38_14895;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=PUW38_14895 CP118116.1 Protein Homology CDS 3057106 3057942 . - 0 ID=cds-WJG80058.1;Parent=gene-PUW38_14895;Dbxref=NCBI_GP:WJG80058.1;Name=WJG80058.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=PUW38_14895;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WJG80058.1;transl_table=11 CP118116.1 Genbank gene 3058373 3059551 . - . ID=gene-PUW38_14900;Name=PUW38_14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14900 CP118116.1 Protein Homology CDS 3058373 3059551 . - 0 ID=cds-WJG80059.1;Parent=gene-PUW38_14900;Dbxref=NCBI_GP:WJG80059.1;Name=WJG80059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=PUW38_14900;product=acetyl-CoA C-acetyltransferase;protein_id=WJG80059.1;transl_table=11 CP118116.1 Genbank pseudogene 3059674 3060536 . - . ID=gene-PUW38_14905;Name=PUW38_14905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_14905;pseudo=true CP118116.1 Protein Homology CDS 3059674 3060536 . - 0 ID=cds-PUW38_14905;Parent=gene-PUW38_14905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=PUW38_14905;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3060640 3060768 . + . ID=gene-PUW38_14910;Name=PUW38_14910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_14910;pseudo=true CP118116.1 Protein Homology CDS 3060640 3060768 . + 0 ID=cds-PUW38_14910;Parent=gene-PUW38_14910;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=PUW38_14910;product=chlorhexidine efflux transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3060944 3061195 . + . ID=gene-PUW38_14915;Name=PUW38_14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14915 CP118116.1 Protein Homology CDS 3060944 3061195 . + 0 ID=cds-WJG83257.1;Parent=gene-PUW38_14915;Dbxref=NCBI_GP:WJG83257.1;Name=WJG83257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=PUW38_14915;product=hypothetical protein;protein_id=WJG83257.1;transl_table=11 CP118116.1 Genbank gene 3061475 3062281 . + . ID=gene-PUW38_14920;Name=PUW38_14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14920 CP118116.1 Protein Homology CDS 3061475 3062281 . + 0 ID=cds-WJG80060.1;Parent=gene-PUW38_14920;Dbxref=NCBI_GP:WJG80060.1;Name=WJG80060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=PUW38_14920;product=DUF1460 domain-containing protein;protein_id=WJG80060.1;transl_table=11 CP118116.1 Genbank gene 3062413 3062486 . - . ID=gene-PUW38_14925;Name=PUW38_14925;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_14925 CP118116.1 tRNAscan-SE tRNA 3062413 3062486 . - . ID=rna-PUW38_14925;Parent=gene-PUW38_14925;anticodon=(pos:complement(3062452..3062454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_14925;product=tRNA-Gly CP118116.1 tRNAscan-SE exon 3062413 3062486 . - . ID=exon-PUW38_14925-1;Parent=rna-PUW38_14925;anticodon=(pos:complement(3062452..3062454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_14925;product=tRNA-Gly CP118116.1 Genbank gene 3062566 3063324 . - . ID=gene-PUW38_14930;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=PUW38_14930 CP118116.1 Protein Homology CDS 3062566 3063324 . - 0 ID=cds-WJG80061.1;Parent=gene-PUW38_14930;Dbxref=NCBI_GP:WJG80061.1;Name=WJG80061.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=PUW38_14930;product=amidase activator ActS;protein_id=WJG80061.1;transl_table=11 CP118116.1 Genbank gene 3063589 3064134 . + . ID=gene-PUW38_14935;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=PUW38_14935 CP118116.1 Protein Homology CDS 3063589 3064134 . + 0 ID=cds-WJG80062.1;Parent=gene-PUW38_14935;Dbxref=NCBI_GP:WJG80062.1;Name=WJG80062.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=PUW38_14935;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WJG80062.1;transl_table=11 CP118116.1 Genbank gene 3064210 3065727 . - . ID=gene-PUW38_14940;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PUW38_14940 CP118116.1 Protein Homology CDS 3064210 3065727 . - 0 ID=cds-WJG80063.1;Parent=gene-PUW38_14940;Dbxref=NCBI_GP:WJG80063.1;Name=WJG80063.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=PUW38_14940;product=lysine--tRNA ligase;protein_id=WJG80063.1;transl_table=11 CP118116.1 Genbank gene 3065737 3066835 . - . ID=gene-PUW38_14945;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=PUW38_14945 CP118116.1 Protein Homology CDS 3066761 3066835 . - 0 ID=cds-WJG80064.1;Parent=gene-PUW38_14945;Dbxref=NCBI_GP:WJG80064.1;Name=WJG80064.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PUW38_14945;product=peptide chain release factor 2;protein_id=WJG80064.1;transl_table=11 CP118116.1 Protein Homology CDS 3065737 3066759 . - 0 ID=cds-WJG80064.1;Parent=gene-PUW38_14945;Dbxref=NCBI_GP:WJG80064.1;Name=WJG80064.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PUW38_14945;product=peptide chain release factor 2;protein_id=WJG80064.1;transl_table=11 CP118116.1 Genbank gene 3066940 3068673 . - . ID=gene-PUW38_14950;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=PUW38_14950 CP118116.1 Protein Homology CDS 3066940 3068673 . - 0 ID=cds-WJG80065.1;Parent=gene-PUW38_14950;Dbxref=NCBI_GP:WJG80065.1;Name=WJG80065.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=PUW38_14950;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WJG80065.1;transl_table=11 CP118116.1 Genbank gene 3068679 3069392 . - . ID=gene-PUW38_14955;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=PUW38_14955 CP118116.1 Protein Homology CDS 3068679 3069392 . - 0 ID=cds-WJG80066.1;Parent=gene-PUW38_14955;Dbxref=NCBI_GP:WJG80066.1;Name=WJG80066.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=PUW38_14955;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WJG80066.1;transl_table=11 CP118116.1 Genbank gene 3069416 3070312 . - . ID=gene-PUW38_14960;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=PUW38_14960 CP118116.1 Protein Homology CDS 3069416 3070312 . - 0 ID=cds-WJG80067.1;Parent=gene-PUW38_14960;Dbxref=NCBI_GP:WJG80067.1;Name=WJG80067.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=PUW38_14960;product=site-specific tyrosine recombinase XerD;protein_id=WJG80067.1;transl_table=11 CP118116.1 Genbank gene 3070425 3070946 . + . ID=gene-PUW38_14965;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=PUW38_14965 CP118116.1 Protein Homology CDS 3070425 3070946 . + 0 ID=cds-WJG80068.1;Parent=gene-PUW38_14965;Dbxref=NCBI_GP:WJG80068.1;Name=WJG80068.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=PUW38_14965;product=flavodoxin FldB;protein_id=WJG80068.1;transl_table=11 CP118116.1 Genbank gene 3070999 3071412 . - . ID=gene-PUW38_14970;Name=PUW38_14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14970 CP118116.1 Protein Homology CDS 3070999 3071412 . - 0 ID=cds-WJG80069.1;Parent=gene-PUW38_14970;Dbxref=NCBI_GP:WJG80069.1;Name=WJG80069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=PUW38_14970;product=protein YgfX;protein_id=WJG80069.1;transl_table=11 CP118116.1 Genbank gene 3071393 3071659 . - . ID=gene-PUW38_14975;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=PUW38_14975 CP118116.1 Protein Homology CDS 3071393 3071659 . - 0 ID=cds-WJG80070.1;Parent=gene-PUW38_14975;Dbxref=NCBI_GP:WJG80070.1;Name=WJG80070.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=PUW38_14975;product=FAD assembly factor SdhE;protein_id=WJG80070.1;transl_table=11 CP118116.1 Genbank gene 3071909 3072889 . + . ID=gene-PUW38_14980;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=PUW38_14980 CP118116.1 Protein Homology CDS 3071909 3072889 . + 0 ID=cds-WJG80071.1;Parent=gene-PUW38_14980;Dbxref=NCBI_GP:WJG80071.1;Name=WJG80071.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=PUW38_14980;product=tRNA-modifying protein YgfZ;protein_id=WJG80071.1;transl_table=11 CP118116.1 Genbank gene 3073005 3073664 . - . ID=gene-PUW38_14985;Name=PUW38_14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_14985 CP118116.1 Protein Homology CDS 3073005 3073664 . - 0 ID=cds-WJG80072.1;Parent=gene-PUW38_14985;Dbxref=NCBI_GP:WJG80072.1;Name=WJG80072.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=PUW38_14985;product=hemolysin III family protein;protein_id=WJG80072.1;transl_table=11 CP118116.1 Genbank gene 3073828 3074139 . - . ID=gene-PUW38_14990;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=PUW38_14990 CP118116.1 Protein Homology CDS 3073828 3074139 . - 0 ID=cds-WJG80073.1;Parent=gene-PUW38_14990;Dbxref=NCBI_GP:WJG80073.1;Name=WJG80073.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=PUW38_14990;product=N(4)-acetylcytidine aminohydrolase;protein_id=WJG80073.1;transl_table=11 CP118116.1 Genbank pseudogene 3074297 3075729 . + . ID=gene-PUW38_14995;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=pseudogene;locus_tag=PUW38_14995;pseudo=true CP118116.1 Protein Homology CDS 3074297 3075729 . + 0 ID=cds-PUW38_14995;Parent=gene-PUW38_14995;Note=frameshifted;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=PUW38_14995;product=6-phospho-beta-glucosidase BglA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3075777 3076670 . - . ID=gene-PUW38_15000;Name=PUW38_15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15000 CP118116.1 Protein Homology CDS 3075777 3076670 . - 0 ID=cds-WJG80074.1;Parent=gene-PUW38_15000;Dbxref=NCBI_GP:WJG80074.1;Name=WJG80074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=PUW38_15000;product=transporter;protein_id=WJG80074.1;transl_table=11 CP118116.1 Genbank gene 3077126 3079999 . - . ID=gene-PUW38_15005;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=PUW38_15005 CP118116.1 Protein Homology CDS 3077126 3079999 . - 0 ID=cds-WJG80075.1;Parent=gene-PUW38_15005;Dbxref=NCBI_GP:WJG80075.1;Name=WJG80075.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=PUW38_15005;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WJG80075.1;transl_table=11 CP118116.1 Genbank gene 3080162 3080551 . - . ID=gene-PUW38_15010;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=PUW38_15010 CP118116.1 Protein Homology CDS 3080162 3080551 . - 0 ID=cds-WJG80076.1;Parent=gene-PUW38_15010;Dbxref=NCBI_GP:WJG80076.1;Name=WJG80076.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=PUW38_15010;product=glycine cleavage system protein GcvH;protein_id=WJG80076.1;transl_table=11 CP118116.1 Genbank gene 3080577 3081671 . - . ID=gene-PUW38_15015;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=PUW38_15015 CP118116.1 Protein Homology CDS 3080577 3081671 . - 0 ID=cds-WJG80077.1;Parent=gene-PUW38_15015;Dbxref=NCBI_GP:WJG80077.1;Name=WJG80077.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=PUW38_15015;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WJG80077.1;transl_table=11 CP118116.1 Genbank gene 3082126 3083328 . - . ID=gene-PUW38_15020;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=PUW38_15020 CP118116.1 Protein Homology CDS 3082126 3083328 . - 0 ID=cds-WJG80078.1;Parent=gene-PUW38_15020;Dbxref=NCBI_GP:WJG80078.1;Name=WJG80078.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=PUW38_15020;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WJG80078.1;transl_table=11 CP118116.1 Genbank gene 3083454 3084632 . - . ID=gene-PUW38_15025;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=PUW38_15025 CP118116.1 Protein Homology CDS 3083454 3084632 . - 0 ID=cds-WJG80079.1;Parent=gene-PUW38_15025;Dbxref=NCBI_GP:WJG80079.1;Name=WJG80079.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=PUW38_15025;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WJG80079.1;transl_table=11 CP118116.1 Genbank gene 3084629 3085945 . - . ID=gene-PUW38_15030;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=PUW38_15030 CP118116.1 Protein Homology CDS 3084629 3085945 . - 0 ID=cds-WJG80080.1;Parent=gene-PUW38_15030;Dbxref=NCBI_GP:WJG80080.1;Name=WJG80080.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=PUW38_15030;product=Xaa-Pro aminopeptidase;protein_id=WJG80080.1;transl_table=11 CP118116.1 Genbank gene 3085971 3086549 . - . ID=gene-PUW38_15035;Name=PUW38_15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15035 CP118116.1 Protein Homology CDS 3085971 3086549 . - 0 ID=cds-WJG80081.1;Parent=gene-PUW38_15035;Dbxref=NCBI_GP:WJG80081.1;Name=WJG80081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=PUW38_15035;product=YecA family protein;protein_id=WJG80081.1;transl_table=11 CP118116.1 Genbank gene 3086716 3087045 . + . ID=gene-PUW38_15040;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=PUW38_15040 CP118116.1 Protein Homology CDS 3086716 3087045 . + 0 ID=cds-WJG80082.1;Parent=gene-PUW38_15040;Dbxref=NCBI_GP:WJG80082.1;Name=WJG80082.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=PUW38_15040;product=cell division protein ZapA;protein_id=WJG80082.1;transl_table=11 CP118116.1 Genbank gene 3087087 3087270 . + . ID=gene-PUW38_15045;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=PUW38_15045 CP118116.1 cmsearch ncRNA 3087087 3087270 . + . ID=rna-PUW38_15045;Parent=gene-PUW38_15045;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_15045;product=6S RNA CP118116.1 cmsearch exon 3087087 3087270 . + . ID=exon-PUW38_15045-1;Parent=rna-PUW38_15045;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_15045;product=6S RNA CP118116.1 Genbank gene 3087291 3087887 . + . ID=gene-PUW38_15050;Name=PUW38_15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15050 CP118116.1 Protein Homology CDS 3087291 3087887 . + 0 ID=cds-WJG80083.1;Parent=gene-PUW38_15050;Dbxref=NCBI_GP:WJG80083.1;Name=WJG80083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=PUW38_15050;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WJG80083.1;transl_table=11 CP118116.1 Genbank gene 3088268 3089500 . - . ID=gene-PUW38_15055;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=PUW38_15055 CP118116.1 Protein Homology CDS 3088268 3089500 . - 0 ID=cds-WJG80084.1;Parent=gene-PUW38_15055;Dbxref=NCBI_GP:WJG80084.1;Name=WJG80084.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=PUW38_15055;product=phosphoglycerate dehydrogenase;protein_id=WJG80084.1;transl_table=11 CP118116.1 Genbank gene 3089767 3090426 . - . ID=gene-PUW38_15060;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=PUW38_15060 CP118116.1 Protein Homology CDS 3089767 3090426 . - 0 ID=cds-WJG80085.1;Parent=gene-PUW38_15060;Dbxref=NCBI_GP:WJG80085.1;Name=WJG80085.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=PUW38_15060;product=ribose-5-phosphate isomerase RpiA;protein_id=WJG80085.1;transl_table=11 CP118116.1 Genbank gene 3090580 3091473 . + . ID=gene-PUW38_15065;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=PUW38_15065 CP118116.1 Protein Homology CDS 3090580 3091473 . + 0 ID=cds-WJG80086.1;Parent=gene-PUW38_15065;Dbxref=NCBI_GP:WJG80086.1;Name=WJG80086.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=PUW38_15065;product=DNA-binding transcriptional regulator ArgP;protein_id=WJG80086.1;transl_table=11 CP118116.1 Genbank gene 3091739 3092485 . - . ID=gene-PUW38_15070;Name=PUW38_15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15070 CP118116.1 Protein Homology CDS 3091739 3092485 . - 0 ID=cds-WJG80087.1;Parent=gene-PUW38_15070;Dbxref=NCBI_GP:WJG80087.1;Name=WJG80087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=PUW38_15070;product=oxidative stress defense protein;protein_id=WJG80087.1;transl_table=11 CP118116.1 Genbank gene 3092579 3093214 . - . ID=gene-PUW38_15075;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=PUW38_15075 CP118116.1 Protein Homology CDS 3092579 3093214 . - 0 ID=cds-WJG80088.1;Parent=gene-PUW38_15075;Dbxref=NCBI_GP:WJG80088.1;Name=WJG80088.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=PUW38_15075;product=arginine exporter ArgO;protein_id=WJG80088.1;transl_table=11 CP118116.1 Genbank gene 3093415 3094275 . - . ID=gene-PUW38_15080;Name=PUW38_15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15080 CP118116.1 Protein Homology CDS 3093415 3094275 . - 0 ID=cds-WJG80089.1;Parent=gene-PUW38_15080;Dbxref=NCBI_GP:WJG80089.1;Name=WJG80089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=PUW38_15080;product=small-conductance mechanosensitive channel MscS;protein_id=WJG80089.1;transl_table=11 CP118116.1 Genbank gene 3094508 3095587 . - . ID=gene-PUW38_15085;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=PUW38_15085 CP118116.1 Protein Homology CDS 3094508 3095587 . - 0 ID=cds-WJG80090.1;Parent=gene-PUW38_15085;Dbxref=NCBI_GP:WJG80090.1;Name=WJG80090.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=PUW38_15085;product=class II fructose-bisphosphate aldolase;protein_id=WJG80090.1;transl_table=11 CP118116.1 Genbank gene 3095688 3096851 . - . ID=gene-PUW38_15090;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=PUW38_15090 CP118116.1 Protein Homology CDS 3095688 3096851 . - 0 ID=cds-WJG80091.1;Parent=gene-PUW38_15090;Dbxref=NCBI_GP:WJG80091.1;Name=WJG80091.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=PUW38_15090;product=phosphoglycerate kinase;protein_id=WJG80091.1;transl_table=11 CP118116.1 Genbank gene 3096873 3097919 . - . ID=gene-PUW38_15095;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=PUW38_15095 CP118116.1 Protein Homology CDS 3096873 3097919 . - 0 ID=cds-WJG80092.1;Parent=gene-PUW38_15095;Dbxref=NCBI_GP:WJG80092.1;Name=WJG80092.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=PUW38_15095;product=erythrose-4-phosphate dehydrogenase;protein_id=WJG80092.1;transl_table=11 CP118116.1 Genbank gene 3098293 3098718 . + . ID=gene-PUW38_15100;Name=PUW38_15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15100 CP118116.1 Protein Homology CDS 3098293 3098718 . + 0 ID=cds-WJG80093.1;Parent=gene-PUW38_15100;Dbxref=NCBI_GP:WJG80093.1;Name=WJG80093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=PUW38_15100;product=DNA-binding protein;protein_id=WJG80093.1;transl_table=11 CP118116.1 Genbank gene 3098744 3099322 . + . ID=gene-PUW38_15105;Name=PUW38_15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15105 CP118116.1 Protein Homology CDS 3098744 3099322 . + 0 ID=cds-WJG80094.1;Parent=gene-PUW38_15105;Dbxref=NCBI_GP:WJG80094.1;Name=WJG80094.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=PUW38_15105;product=ECF transporter S component;protein_id=WJG80094.1;transl_table=11 CP118116.1 Genbank gene 3099323 3100030 . + . ID=gene-PUW38_15110;Name=PUW38_15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15110 CP118116.1 Protein Homology CDS 3099323 3100030 . + 0 ID=cds-WJG80095.1;Parent=gene-PUW38_15110;Dbxref=NCBI_GP:WJG80095.1;Name=WJG80095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=PUW38_15110;product=energy-coupling factor transporter transmembrane component T;protein_id=WJG80095.1;transl_table=11 CP118116.1 Genbank gene 3100018 3100695 . + . ID=gene-PUW38_15115;Name=PUW38_15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15115 CP118116.1 Protein Homology CDS 3100018 3100695 . + 0 ID=cds-WJG80096.1;Parent=gene-PUW38_15115;Dbxref=NCBI_GP:WJG80096.1;Name=WJG80096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=PUW38_15115;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WJG80096.1;transl_table=11 CP118116.1 Genbank gene 3100689 3101345 . + . ID=gene-PUW38_15120;Name=PUW38_15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15120 CP118116.1 Protein Homology CDS 3100689 3101345 . + 0 ID=cds-WJG80097.1;Parent=gene-PUW38_15120;Dbxref=NCBI_GP:WJG80097.1;Name=WJG80097.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=PUW38_15120;product=ATP-binding cassette domain-containing protein;protein_id=WJG80097.1;transl_table=11 CP118116.1 Genbank gene 3101389 3103380 . - . ID=gene-PUW38_15125;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PUW38_15125 CP118116.1 Protein Homology CDS 3101389 3103380 . - 0 ID=cds-WJG80098.1;Parent=gene-PUW38_15125;Dbxref=NCBI_GP:WJG80098.1;Name=WJG80098.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=PUW38_15125;product=transketolase;protein_id=WJG80098.1;transl_table=11 CP118116.1 Genbank gene 3103656 3104414 . + . ID=gene-PUW38_15130;Name=PUW38_15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15130 CP118116.1 Protein Homology CDS 3103656 3104414 . + 0 ID=cds-WJG80099.1;Parent=gene-PUW38_15130;Dbxref=NCBI_GP:WJG80099.1;Name=WJG80099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=PUW38_15130;product=M48 family metallopeptidase;protein_id=WJG80099.1;transl_table=11 CP118116.1 Genbank pseudogene 3104515 3105434 . - . ID=gene-PUW38_15135;Name=speB;gbkey=Gene;gene=speB;gene_biotype=pseudogene;locus_tag=PUW38_15135;pseudo=true CP118116.1 Protein Homology CDS 3104515 3105434 . - 0 ID=cds-PUW38_15135;Parent=gene-PUW38_15135;Note=frameshifted;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499737.1;locus_tag=PUW38_15135;product=agmatinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3105639 3106595 . - . ID=gene-PUW38_15140;Name=PUW38_15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15140 CP118116.1 Protein Homology CDS 3105639 3106595 . - 0 ID=cds-WJG80100.1;Parent=gene-PUW38_15140;Dbxref=NCBI_GP:WJG80100.1;Name=WJG80100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=PUW38_15140;product=alpha/beta hydrolase;protein_id=WJG80100.1;transl_table=11 CP118116.1 Genbank gene 3106788 3107282 . - . ID=gene-PUW38_15145;Name=PUW38_15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15145 CP118116.1 Protein Homology CDS 3106788 3107282 . - 0 ID=cds-WJG80101.1;Parent=gene-PUW38_15145;Dbxref=NCBI_GP:WJG80101.1;Name=WJG80101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839091.1;locus_tag=PUW38_15145;product=YhcH/YjgK/YiaL family protein;protein_id=WJG80101.1;transl_table=11 CP118116.1 Genbank gene 3107321 3108328 . - . ID=gene-PUW38_15150;Name=PUW38_15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15150 CP118116.1 Protein Homology CDS 3107321 3108328 . - 0 ID=cds-WJG80102.1;Parent=gene-PUW38_15150;Dbxref=NCBI_GP:WJG80102.1;Name=WJG80102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=PUW38_15150;product=Ldh family oxidoreductase;protein_id=WJG80102.1;transl_table=11 CP118116.1 Genbank gene 3108342 3109358 . - . ID=gene-PUW38_15155;Name=PUW38_15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15155 CP118116.1 Protein Homology CDS 3108342 3109358 . - 0 ID=cds-WJG80103.1;Parent=gene-PUW38_15155;Dbxref=NCBI_GP:WJG80103.1;Name=WJG80103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=PUW38_15155;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WJG80103.1;transl_table=11 CP118116.1 Genbank gene 3109361 3110833 . - . ID=gene-PUW38_15160;Name=PUW38_15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15160 CP118116.1 Protein Homology CDS 3109361 3110833 . - 0 ID=cds-WJG80104.1;Parent=gene-PUW38_15160;Dbxref=NCBI_GP:WJG80104.1;Name=WJG80104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=PUW38_15160;product=mannitol dehydrogenase family protein;protein_id=WJG80104.1;transl_table=11 CP118116.1 Genbank gene 3111482 3111697 . + . ID=gene-PUW38_15165;Name=PUW38_15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15165 CP118116.1 Protein Homology CDS 3111482 3111697 . + 0 ID=cds-WJG83258.1;Parent=gene-PUW38_15165;Dbxref=NCBI_GP:WJG83258.1;Name=WJG83258.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.2;locus_tag=PUW38_15165;product=hypothetical protein;protein_id=WJG83258.1;transl_table=11 CP118116.1 Genbank gene 3111673 3111741 . + . ID=gene-PUW38_15170;Name=PUW38_15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15170 CP118116.1 Protein Homology CDS 3111673 3111741 . + 0 ID=cds-WJG83259.1;Parent=gene-PUW38_15170;Dbxref=NCBI_GP:WJG83259.1;Name=WJG83259.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.2;locus_tag=PUW38_15170;product=hypothetical protein;protein_id=WJG83259.1;transl_table=11 CP118116.1 Genbank gene 3112056 3112856 . - . ID=gene-PUW38_15175;Name=PUW38_15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15175 CP118116.1 Protein Homology CDS 3112056 3112856 . - 0 ID=cds-WJG80105.1;Parent=gene-PUW38_15175;Dbxref=NCBI_GP:WJG80105.1;Name=WJG80105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=PUW38_15175;product=FadR/GntR family transcriptional regulator;protein_id=WJG80105.1;transl_table=11 CP118116.1 Genbank gene 3113010 3113741 . - . ID=gene-PUW38_15180;Name=PUW38_15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15180 CP118116.1 Protein Homology CDS 3113010 3113741 . - 0 ID=cds-WJG80106.1;Parent=gene-PUW38_15180;Dbxref=NCBI_GP:WJG80106.1;Name=WJG80106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=PUW38_15180;product=hypothetical protein;protein_id=WJG80106.1;transl_table=11 CP118116.1 Genbank gene 3113886 3115862 . - . ID=gene-PUW38_15185;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=PUW38_15185 CP118116.1 Protein Homology CDS 3113886 3115862 . - 0 ID=cds-WJG80107.1;Parent=gene-PUW38_15185;Dbxref=NCBI_GP:WJG80107.1;Name=WJG80107.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=PUW38_15185;product=biosynthetic arginine decarboxylase;protein_id=WJG80107.1;transl_table=11 CP118116.1 Genbank gene 3115871 3116002 . - . ID=gene-PUW38_15190;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=PUW38_15190 CP118116.1 Protein Homology CDS 3115871 3116002 . - 0 ID=cds-WJG80108.1;Parent=gene-PUW38_15190;Dbxref=NCBI_GP:WJG80108.1;Name=WJG80108.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=PUW38_15190;product=acid stress response protein YqgB;protein_id=WJG80108.1;transl_table=11 CP118116.1 Genbank gene 3116088 3116237 . - . ID=gene-PUW38_15195;Name=PUW38_15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15195 CP118116.1 Protein Homology CDS 3116088 3116237 . - 0 ID=cds-WJG80109.1;Parent=gene-PUW38_15195;Dbxref=NCBI_GP:WJG80109.1;Name=WJG80109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=PUW38_15195;product=hypothetical protein;protein_id=WJG80109.1;transl_table=11 CP118116.1 Genbank gene 3116297 3116596 . - . ID=gene-PUW38_15200;Name=PUW38_15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15200 CP118116.1 GeneMarkS-2+ CDS 3116297 3116596 . - 0 ID=cds-WJG80110.1;Parent=gene-PUW38_15200;Dbxref=NCBI_GP:WJG80110.1;Name=WJG80110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_15200;product=hypothetical protein;protein_id=WJG80110.1;transl_table=11 CP118116.1 Genbank pseudogene 3116652 3117805 . + . ID=gene-PUW38_15205;Name=metK;gbkey=Gene;gene=metK;gene_biotype=pseudogene;locus_tag=PUW38_15205;pseudo=true CP118116.1 Protein Homology CDS 3116652 3117805 . + 0 ID=cds-PUW38_15205;Parent=gene-PUW38_15205;Note=frameshifted;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=PUW38_15205;product=methionine adenosyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3118298 3119692 . + . ID=gene-PUW38_15210;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=PUW38_15210 CP118116.1 Protein Homology CDS 3118298 3119692 . + 0 ID=cds-WJG80111.1;Parent=gene-PUW38_15210;Dbxref=NCBI_GP:WJG80111.1;Name=WJG80111.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=PUW38_15210;product=galactose/proton symporter;protein_id=WJG80111.1;transl_table=11 CP118116.1 Genbank gene 3119771 3120268 . + . ID=gene-PUW38_15215;Name=PUW38_15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15215 CP118116.1 Protein Homology CDS 3119771 3120268 . + 0 ID=cds-WJG80112.1;Parent=gene-PUW38_15215;Dbxref=NCBI_GP:WJG80112.1;Name=WJG80112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=PUW38_15215;product=SprT family zinc-dependent metalloprotease;protein_id=WJG80112.1;transl_table=11 CP118116.1 Genbank gene 3120364 3121071 . + . ID=gene-PUW38_15220;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=PUW38_15220 CP118116.1 Protein Homology CDS 3120364 3121071 . + 0 ID=cds-WJG80113.1;Parent=gene-PUW38_15220;Dbxref=NCBI_GP:WJG80113.1;Name=WJG80113.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=PUW38_15220;product=deoxyribonuclease I;protein_id=WJG80113.1;transl_table=11 CP118116.1 Genbank gene 3121148 3121879 . + . ID=gene-PUW38_15225;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=PUW38_15225 CP118116.1 Protein Homology CDS 3121148 3121879 . + 0 ID=cds-WJG80114.1;Parent=gene-PUW38_15225;Dbxref=NCBI_GP:WJG80114.1;Name=WJG80114.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=PUW38_15225;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WJG80114.1;transl_table=11 CP118116.1 Genbank gene 3121899 3122846 . + . ID=gene-PUW38_15230;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=PUW38_15230 CP118116.1 Protein Homology CDS 3121899 3122846 . + 0 ID=cds-WJG80115.1;Parent=gene-PUW38_15230;Dbxref=NCBI_GP:WJG80115.1;Name=WJG80115.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=PUW38_15230;product=glutathione synthase;protein_id=WJG80115.1;transl_table=11 CP118116.1 Genbank gene 3123062 3123625 . + . ID=gene-PUW38_15235;Name=PUW38_15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15235 CP118116.1 Protein Homology CDS 3123062 3123625 . + 0 ID=cds-WJG80116.1;Parent=gene-PUW38_15235;Dbxref=NCBI_GP:WJG80116.1;Name=WJG80116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=PUW38_15235;product=YqgE/AlgH family protein;protein_id=WJG80116.1;transl_table=11 CP118116.1 Genbank gene 3123625 3124041 . + . ID=gene-PUW38_15240;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=PUW38_15240 CP118116.1 Protein Homology CDS 3123625 3124041 . + 0 ID=cds-WJG80117.1;Parent=gene-PUW38_15240;Dbxref=NCBI_GP:WJG80117.1;Name=WJG80117.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=PUW38_15240;product=Holliday junction resolvase RuvX;protein_id=WJG80117.1;transl_table=11 CP118116.1 Genbank gene 3124088 3124774 . - . ID=gene-PUW38_15245;Name=PUW38_15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15245 CP118116.1 Protein Homology CDS 3124088 3124774 . - 0 ID=cds-WJG80118.1;Parent=gene-PUW38_15245;Dbxref=NCBI_GP:WJG80118.1;Name=WJG80118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=PUW38_15245;product=IclR family transcriptional regulator;protein_id=WJG80118.1;transl_table=11 CP118116.1 Genbank gene 3124906 3125886 . - . ID=gene-PUW38_15250;Name=PUW38_15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15250 CP118116.1 Protein Homology CDS 3124906 3125886 . - 0 ID=cds-WJG80119.1;Parent=gene-PUW38_15250;Dbxref=NCBI_GP:WJG80119.1;Name=WJG80119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=PUW38_15250;product=type IV pilus twitching motility protein PilT;protein_id=WJG80119.1;transl_table=11 CP118116.1 Genbank pseudogene 3125904 3126607 . + . ID=gene-PUW38_15255;Name=PUW38_15255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15255;pseudo=true CP118116.1 Protein Homology CDS 3125904 3126607 . + 0 ID=cds-PUW38_15255;Parent=gene-PUW38_15255;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=PUW38_15255;product=YggS family pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3126626 3127192 . + . ID=gene-PUW38_15260;Name=PUW38_15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15260 CP118116.1 Protein Homology CDS 3126626 3127192 . + 0 ID=cds-WJG80120.1;Parent=gene-PUW38_15260;Dbxref=NCBI_GP:WJG80120.1;Name=WJG80120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=PUW38_15260;product=YggT family protein;protein_id=WJG80120.1;transl_table=11 CP118116.1 Genbank gene 3127189 3127479 . + . ID=gene-PUW38_15265;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=PUW38_15265 CP118116.1 Protein Homology CDS 3127189 3127479 . + 0 ID=cds-WJG80121.1;Parent=gene-PUW38_15265;Dbxref=NCBI_GP:WJG80121.1;Name=WJG80121.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=PUW38_15265;product=DUF167 family protein YggU;protein_id=WJG80121.1;transl_table=11 CP118116.1 Genbank pseudogene 3127487 3128079 . + . ID=gene-PUW38_15270;Name=PUW38_15270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15270;pseudo=true CP118116.1 Protein Homology CDS 3127487 3128079 . + 0 ID=cds-PUW38_15270;Parent=gene-PUW38_15270;Note=frameshifted;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=PUW38_15270;product=XTP/dITP diphosphatase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3128072 3129208 . + . ID=gene-PUW38_15275;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=PUW38_15275 CP118116.1 Protein Homology CDS 3128072 3129208 . + 0 ID=cds-WJG80122.1;Parent=gene-PUW38_15275;Dbxref=NCBI_GP:WJG80122.1;Name=WJG80122.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=PUW38_15275;product=radical SAM family heme chaperone HemW;protein_id=WJG80122.1;transl_table=11 CP118116.1 Genbank pseudogene 3129299 3130306 . - . ID=gene-PUW38_15280;Name=PUW38_15280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15280;pseudo=true CP118116.1 Protein Homology CDS 3129299 3130306 . - 0 ID=cds-PUW38_15280;Parent=gene-PUW38_15280;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=PUW38_15280;product=DUF1202 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3130439 3131485 . - . ID=gene-PUW38_15285;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=PUW38_15285 CP118116.1 Protein Homology CDS 3130439 3131485 . - 0 ID=cds-WJG80123.1;Parent=gene-PUW38_15285;Dbxref=NCBI_GP:WJG80123.1;Name=WJG80123.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=PUW38_15285;product=L-asparaginase 2;protein_id=WJG80123.1;transl_table=11 CP118116.1 Genbank gene 3131674 3132393 . - . ID=gene-PUW38_15290;Name=PUW38_15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15290 CP118116.1 Protein Homology CDS 3131674 3132393 . - 0 ID=cds-WJG80124.1;Parent=gene-PUW38_15290;Dbxref=NCBI_GP:WJG80124.1;Name=WJG80124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=PUW38_15290;product=DUF2884 domain-containing protein;protein_id=WJG80124.1;transl_table=11 CP118116.1 Genbank gene 3132443 3132769 . - . ID=gene-PUW38_15295;Name=PUW38_15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15295 CP118116.1 Protein Homology CDS 3132443 3132769 . - 0 ID=cds-WJG80125.1;Parent=gene-PUW38_15295;Dbxref=NCBI_GP:WJG80125.1;Name=WJG80125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=PUW38_15295;product=YggL family protein;protein_id=WJG80125.1;transl_table=11 CP118116.1 Genbank gene 3132769 3133488 . - . ID=gene-PUW38_15300;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=PUW38_15300 CP118116.1 Protein Homology CDS 3132769 3133488 . - 0 ID=cds-WJG80126.1;Parent=gene-PUW38_15300;Dbxref=NCBI_GP:WJG80126.1;Name=WJG80126.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=PUW38_15300;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WJG80126.1;transl_table=11 CP118116.1 Genbank gene 3133643 3134695 . + . ID=gene-PUW38_15305;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=PUW38_15305 CP118116.1 Protein Homology CDS 3133643 3134695 . + 0 ID=cds-WJG80127.1;Parent=gene-PUW38_15305;Dbxref=NCBI_GP:WJG80127.1;Name=WJG80127.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=PUW38_15305;product=A/G-specific adenine glycosylase;protein_id=WJG80127.1;transl_table=11 CP118116.1 Genbank gene 3134723 3134998 . + . ID=gene-PUW38_15310;Name=PUW38_15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15310 CP118116.1 Protein Homology CDS 3134723 3134998 . + 0 ID=cds-WJG80128.1;Parent=gene-PUW38_15310;Dbxref=NCBI_GP:WJG80128.1;Name=WJG80128.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=PUW38_15310;product=oxidative damage protection protein;protein_id=WJG80128.1;transl_table=11 CP118116.1 Genbank gene 3135111 3136196 . + . ID=gene-PUW38_15315;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=PUW38_15315 CP118116.1 Protein Homology CDS 3135111 3136196 . + 0 ID=cds-WJG80129.1;Parent=gene-PUW38_15315;Dbxref=NCBI_GP:WJG80129.1;Name=WJG80129.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=PUW38_15315;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WJG80129.1;transl_table=11 CP118116.1 Genbank gene 3136413 3137669 . + . ID=gene-PUW38_15320;Name=PUW38_15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15320 CP118116.1 Protein Homology CDS 3136413 3137669 . + 0 ID=cds-WJG80130.1;Parent=gene-PUW38_15320;Dbxref=NCBI_GP:WJG80130.1;Name=WJG80130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=PUW38_15320;product=nucleoside permease;protein_id=WJG80130.1;transl_table=11 CP118116.1 Genbank pseudogene 3137731 3139862 . - . ID=gene-PUW38_15325;Name=PUW38_15325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15325;pseudo=true CP118116.1 Protein Homology CDS 3137731 3139862 . - 0 ID=cds-PUW38_15325;Parent=gene-PUW38_15325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=PUW38_15325;product=ornithine decarboxylase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3140287 3140994 . + . ID=gene-PUW38_15330;Name=PUW38_15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15330 CP118116.1 Protein Homology CDS 3140287 3140994 . + 0 ID=cds-WJG80131.1;Parent=gene-PUW38_15330;Dbxref=NCBI_GP:WJG80131.1;Name=WJG80131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=PUW38_15330;product=DUF554 domain-containing protein;protein_id=WJG80131.1;transl_table=11 CP118116.1 Genbank gene 3141100 3141175 . + . ID=gene-PUW38_15335;Name=PUW38_15335;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_15335 CP118116.1 tRNAscan-SE tRNA 3141100 3141175 . + . ID=rna-PUW38_15335;Parent=gene-PUW38_15335;anticodon=(pos:3141133..3141135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_15335;product=tRNA-Phe CP118116.1 tRNAscan-SE exon 3141100 3141175 . + . ID=exon-PUW38_15335-1;Parent=rna-PUW38_15335;anticodon=(pos:3141133..3141135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_15335;product=tRNA-Phe CP118116.1 Genbank gene 3141334 3141714 . - . ID=gene-PUW38_15340;Name=PUW38_15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15340 CP118116.1 Protein Homology CDS 3141334 3141714 . - 0 ID=cds-WJG80132.1;Parent=gene-PUW38_15340;Dbxref=NCBI_GP:WJG80132.1;Name=WJG80132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=PUW38_15340;product=VOC family protein;protein_id=WJG80132.1;transl_table=11 CP118116.1 Genbank gene 3141778 3143103 . - . ID=gene-PUW38_15345;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=PUW38_15345 CP118116.1 Protein Homology CDS 3141778 3143103 . - 0 ID=cds-WJG80133.1;Parent=gene-PUW38_15345;Dbxref=NCBI_GP:WJG80133.1;Name=WJG80133.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=PUW38_15345;product=itaconate CoA-transferase RipA/Ict;protein_id=WJG80133.1;transl_table=11 CP118116.1 Genbank pseudogene 3143128 3143654 . - . ID=gene-PUW38_15350;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=pseudogene;locus_tag=PUW38_15350;pseudo=true CP118116.1 Protein Homology CDS 3143128 3143654 . - 0 ID=cds-PUW38_15350;Parent=gene-PUW38_15350;Note=Second step in itaconate degradation.%3B frameshifted;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=PUW38_15350;product=(R)-specific enoyl-CoA hydratase RipB/Ich;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3143678 3144520 . - . ID=gene-PUW38_15355;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=PUW38_15355 CP118116.1 Protein Homology CDS 3143678 3144520 . - 0 ID=cds-WJG80134.1;Parent=gene-PUW38_15355;Dbxref=NCBI_GP:WJG80134.1;Name=WJG80134.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=PUW38_15355;product=itaconate degradation C-C-lyase RipC;protein_id=WJG80134.1;transl_table=11 CP118116.1 Genbank gene 3144612 3145490 . + . ID=gene-PUW38_15360;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=PUW38_15360 CP118116.1 Protein Homology CDS 3144612 3145490 . + 0 ID=cds-WJG80135.1;Parent=gene-PUW38_15360;Dbxref=NCBI_GP:WJG80135.1;Name=WJG80135.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=PUW38_15360;product=itaconate degradation transcriptional regulator RipR;protein_id=WJG80135.1;transl_table=11 CP118116.1 Genbank gene 3145538 3147277 . - . ID=gene-PUW38_15365;Name=PUW38_15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15365 CP118116.1 Protein Homology CDS 3145538 3147277 . - 0 ID=cds-WJG80136.1;Parent=gene-PUW38_15365;Dbxref=NCBI_GP:WJG80136.1;Name=WJG80136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=PUW38_15365;product=arylsulfatase;protein_id=WJG80136.1;transl_table=11 CP118116.1 Genbank pseudogene 3147346 3148528 . - . ID=gene-PUW38_15370;Name=PUW38_15370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15370;pseudo=true CP118116.1 Protein Homology CDS 3147346 3148528 . - 0 ID=cds-PUW38_15370;Parent=gene-PUW38_15370;Note=frameshifted;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=PUW38_15370;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3149040 3149723 . + . ID=gene-PUW38_15375;Name=PUW38_15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15375 CP118116.1 Protein Homology CDS 3149040 3149723 . + 0 ID=cds-WJG83260.1;Parent=gene-PUW38_15375;Dbxref=NCBI_GP:WJG83260.1;Name=WJG83260.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=PUW38_15375;product=LuxR C-terminal-related transcriptional regulator;protein_id=WJG83260.1;transl_table=11 CP118116.1 Genbank gene 3149827 3150384 . - . ID=gene-PUW38_15380;Name=PUW38_15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15380 CP118116.1 Protein Homology CDS 3149827 3150384 . - 0 ID=cds-WJG80137.1;Parent=gene-PUW38_15380;Dbxref=NCBI_GP:WJG80137.1;Name=WJG80137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=PUW38_15380;product=DUF3156 family protein;protein_id=WJG80137.1;transl_table=11 CP118116.1 Genbank gene 3150362 3151861 . - . ID=gene-PUW38_15385;Name=PUW38_15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15385 CP118116.1 Protein Homology CDS 3150362 3151861 . - 0 ID=cds-WJG80138.1;Parent=gene-PUW38_15385;Dbxref=NCBI_GP:WJG80138.1;Name=WJG80138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=PUW38_15385;product=APC family permease;protein_id=WJG80138.1;transl_table=11 CP118116.1 Genbank gene 3152070 3152444 . - . ID=gene-PUW38_15390;Name=PUW38_15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15390 CP118116.1 Protein Homology CDS 3152070 3152444 . - 0 ID=cds-WJG80139.1;Parent=gene-PUW38_15390;Dbxref=NCBI_GP:WJG80139.1;Name=WJG80139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=PUW38_15390;product=cupin domain-containing protein;protein_id=WJG80139.1;transl_table=11 CP118116.1 Genbank pseudogene 3152459 3153759 . - . ID=gene-PUW38_15395;Name=PUW38_15395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15395;pseudo=true CP118116.1 Protein Homology CDS 3152459 3153759 . - 0 ID=cds-PUW38_15395;Parent=gene-PUW38_15395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=PUW38_15395;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3153921 3155405 . + . ID=gene-PUW38_15400;Name=PUW38_15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15400 CP118116.1 Protein Homology CDS 3153921 3155405 . + 0 ID=cds-WJG80140.1;Parent=gene-PUW38_15400;Dbxref=NCBI_GP:WJG80140.1;Name=WJG80140.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=PUW38_15400;product=aldehyde dehydrogenase family protein;protein_id=WJG80140.1;transl_table=11 CP118116.1 Genbank gene 3155541 3155921 . - . ID=gene-PUW38_15405;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=PUW38_15405 CP118116.1 Protein Homology CDS 3155541 3155921 . - 0 ID=cds-WJG83261.1;Parent=gene-PUW38_15405;Dbxref=NCBI_GP:WJG83261.1;Name=WJG83261.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=PUW38_15405;product=anti-adapter protein IraD;protein_id=WJG83261.1;transl_table=11 CP118116.1 Genbank gene 3155921 3156406 . - . ID=gene-PUW38_15410;Name=PUW38_15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15410 CP118116.1 Protein Homology CDS 3155921 3156406 . - 0 ID=cds-WJG80141.1;Parent=gene-PUW38_15410;Dbxref=NCBI_GP:WJG80141.1;Name=WJG80141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=PUW38_15410;product=Hcp family type VI secretion system effector;protein_id=WJG80141.1;transl_table=11 CP118116.1 Genbank gene 3157132 3158055 . - . ID=gene-PUW38_15415;Name=PUW38_15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15415 CP118116.1 Protein Homology CDS 3157132 3158055 . - 0 ID=cds-WJG80142.1;Parent=gene-PUW38_15415;Dbxref=NCBI_GP:WJG80142.1;Name=WJG80142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=PUW38_15415;product=polysaccharide deacetylase;protein_id=WJG80142.1;transl_table=11 CP118116.1 Genbank gene 3158094 3158972 . - . ID=gene-PUW38_15420;Name=PUW38_15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15420 CP118116.1 Protein Homology CDS 3158094 3158972 . - 0 ID=cds-WJG80143.1;Parent=gene-PUW38_15420;Dbxref=NCBI_GP:WJG80143.1;Name=WJG80143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=PUW38_15420;product=carbon-nitrogen hydrolase family protein;protein_id=WJG80143.1;transl_table=11 CP118116.1 Genbank gene 3159368 3160672 . - . ID=gene-PUW38_15425;Name=PUW38_15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15425 CP118116.1 Protein Homology CDS 3159368 3160672 . - 0 ID=cds-WJG80144.1;Parent=gene-PUW38_15425;Dbxref=NCBI_GP:WJG80144.1;Name=WJG80144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=PUW38_15425;product=MFS transporter;protein_id=WJG80144.1;transl_table=11 CP118116.1 Genbank gene 3161077 3162261 . + . ID=gene-PUW38_15430;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=PUW38_15430 CP118116.1 Protein Homology CDS 3161077 3162261 . + 0 ID=cds-WJG80145.1;Parent=gene-PUW38_15430;Dbxref=NCBI_GP:WJG80145.1;Name=WJG80145.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=PUW38_15430;product=mannonate dehydratase;protein_id=WJG80145.1;transl_table=11 CP118116.1 Genbank gene 3162372 3163844 . + . ID=gene-PUW38_15435;Name=PUW38_15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15435 CP118116.1 Protein Homology CDS 3162372 3163844 . + 0 ID=cds-WJG80146.1;Parent=gene-PUW38_15435;Dbxref=NCBI_GP:WJG80146.1;Name=WJG80146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=PUW38_15435;product=fructuronate reductase;protein_id=WJG80146.1;transl_table=11 CP118116.1 Genbank gene 3163856 3165268 . + . ID=gene-PUW38_15440;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=PUW38_15440 CP118116.1 Protein Homology CDS 3163856 3165268 . + 0 ID=cds-WJG80147.1;Parent=gene-PUW38_15440;Dbxref=NCBI_GP:WJG80147.1;Name=WJG80147.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=PUW38_15440;product=glucuronate isomerase;protein_id=WJG80147.1;transl_table=11 CP118116.1 Genbank gene 3165568 3166623 . - . ID=gene-PUW38_15445;Name=PUW38_15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15445 CP118116.1 Protein Homology CDS 3165568 3166623 . - 0 ID=cds-WJG80148.1;Parent=gene-PUW38_15445;Dbxref=NCBI_GP:WJG80148.1;Name=WJG80148.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=PUW38_15445;product=methyl-accepting chemotaxis protein;protein_id=WJG80148.1;transl_table=11 CP118116.1 Genbank pseudogene 3167293 3169148 . - . ID=gene-PUW38_15450;Name=gss;gbkey=Gene;gene=gss;gene_biotype=pseudogene;locus_tag=PUW38_15450;pseudo=true CP118116.1 Protein Homology CDS 3167293 3169148 . - 0 ID=cds-PUW38_15450;Parent=gene-PUW38_15450;Note=frameshifted;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=PUW38_15450;product=bifunctional glutathionylspermidine amidase/synthase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3169375 3170240 . + . ID=gene-PUW38_15455;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=pseudogene;locus_tag=PUW38_15455;pseudo=true CP118116.1 Protein Homology CDS 3169375 3170240 . + 0 ID=cds-PUW38_15455;Parent=gene-PUW38_15455;Note=frameshifted;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=PUW38_15455;product=glutathione-dependent disulfide-bond oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3170308 3171018 . - . ID=gene-PUW38_15460;Name=PUW38_15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15460 CP118116.1 Protein Homology CDS 3170308 3171018 . - 0 ID=cds-WJG80149.1;Parent=gene-PUW38_15460;Dbxref=NCBI_GP:WJG80149.1;Name=WJG80149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=PUW38_15460;product=molybdate ABC transporter substrate-binding protein;protein_id=WJG80149.1;transl_table=11 CP118116.1 Genbank gene 3171018 3172070 . - . ID=gene-PUW38_15465;Name=PUW38_15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15465 CP118116.1 Protein Homology CDS 3171018 3172070 . - 0 ID=cds-WJG80150.1;Parent=gene-PUW38_15465;Dbxref=NCBI_GP:WJG80150.1;Name=WJG80150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=PUW38_15465;product=ABC transporter substrate-binding protein;protein_id=WJG80150.1;transl_table=11 CP118116.1 Genbank gene 3172146 3172394 . - . ID=gene-PUW38_15470;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=PUW38_15470 CP118116.1 Protein Homology CDS 3172146 3172394 . - 0 ID=cds-WJG80151.1;Parent=gene-PUW38_15470;Dbxref=NCBI_GP:WJG80151.1;Name=WJG80151.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=PUW38_15470;product=hydrogenase maturation factor HybG;protein_id=WJG80151.1;transl_table=11 CP118116.1 Genbank gene 3172422 3172763 . - . ID=gene-PUW38_15475;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW38_15475 CP118116.1 Protein Homology CDS 3172422 3172763 . - 0 ID=cds-WJG80152.1;Parent=gene-PUW38_15475;Dbxref=NCBI_GP:WJG80152.1;Name=WJG80152.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=PUW38_15475;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJG80152.1;transl_table=11 CP118116.1 Genbank gene 3172756 3173244 . - . ID=gene-PUW38_15480;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=PUW38_15480 CP118116.1 Protein Homology CDS 3172756 3173244 . - 0 ID=cds-WJG80153.1;Parent=gene-PUW38_15480;Dbxref=NCBI_GP:WJG80153.1;Name=WJG80153.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=PUW38_15480;product=hydrogenase-2 assembly chaperone;protein_id=WJG80153.1;transl_table=11 CP118116.1 Genbank gene 3173237 3173731 . - . ID=gene-PUW38_15485;Name=PUW38_15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15485 CP118116.1 Protein Homology CDS 3173237 3173731 . - 0 ID=cds-WJG80154.1;Parent=gene-PUW38_15485;Dbxref=NCBI_GP:WJG80154.1;Name=WJG80154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=PUW38_15485;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WJG80154.1;transl_table=11 CP118116.1 Genbank gene 3173731 3175434 . - . ID=gene-PUW38_15490;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=PUW38_15490 CP118116.1 Protein Homology CDS 3173731 3175434 . - 0 ID=cds-WJG80155.1;Parent=gene-PUW38_15490;Dbxref=NCBI_GP:WJG80155.1;Name=WJG80155.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=PUW38_15490;product=hydrogenase 2 large subunit;protein_id=WJG80155.1;transl_table=11 CP118116.1 Genbank gene 3175431 3176609 . - . ID=gene-PUW38_15495;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=PUW38_15495 CP118116.1 Protein Homology CDS 3175431 3176609 . - 0 ID=cds-WJG80156.1;Parent=gene-PUW38_15495;Dbxref=NCBI_GP:WJG80156.1;Name=WJG80156.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=PUW38_15495;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WJG80156.1;transl_table=11 CP118116.1 Genbank gene 3176599 3177585 . - . ID=gene-PUW38_15500;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=PUW38_15500 CP118116.1 Protein Homology CDS 3176599 3177585 . - 0 ID=cds-WJG80157.1;Parent=gene-PUW38_15500;Dbxref=NCBI_GP:WJG80157.1;Name=WJG80157.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=PUW38_15500;product=hydrogenase 2 operon protein HybA;protein_id=WJG80157.1;transl_table=11 CP118116.1 Genbank gene 3177588 3178706 . - . ID=gene-PUW38_15505;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=PUW38_15505 CP118116.1 Protein Homology CDS 3177588 3178706 . - 0 ID=cds-WJG80158.1;Parent=gene-PUW38_15505;Dbxref=NCBI_GP:WJG80158.1;Name=WJG80158.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=PUW38_15505;product=hydrogenase 2 small subunit;protein_id=WJG80158.1;transl_table=11 CP118116.1 Genbank gene 3178896 3179183 . - . ID=gene-PUW38_15510;Name=PUW38_15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15510 CP118116.1 Protein Homology CDS 3178896 3179183 . - 0 ID=cds-WJG80159.1;Parent=gene-PUW38_15510;Dbxref=NCBI_GP:WJG80159.1;Name=WJG80159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=PUW38_15510;product=DUF2623 family protein;protein_id=WJG80159.1;transl_table=11 CP118116.1 Genbank gene 3179268 3180911 . - . ID=gene-PUW38_15515;Name=PUW38_15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15515 CP118116.1 Protein Homology CDS 3179268 3180911 . - 0 ID=cds-WJG80160.1;Parent=gene-PUW38_15515;Dbxref=NCBI_GP:WJG80160.1;Name=WJG80160.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=PUW38_15515;product=methyl-accepting chemotaxis protein;protein_id=WJG80160.1;transl_table=11 CP118116.1 Genbank pseudogene 3181218 3181711 . - . ID=gene-PUW38_15520;Name=PUW38_15520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15520;pseudo=true CP118116.1 Protein Homology CDS 3181218 3181711 . - 0 ID=cds-PUW38_15520;Parent=gene-PUW38_15520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=PUW38_15520;product=TIGR00645 family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3181991 3182514 . - . ID=gene-PUW38_15525;Name=PUW38_15525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15525;pseudo=true CP118116.1 Protein Homology CDS 3181991 3182514 . - 0 ID=cds-PUW38_15525;Parent=gene-PUW38_15525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462069.1;locus_tag=PUW38_15525;product=RNA helicase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3182606 3183016 . + . ID=gene-PUW38_15530;Name=PUW38_15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15530 CP118116.1 Protein Homology CDS 3182606 3183016 . + 0 ID=cds-WJG80161.1;Parent=gene-PUW38_15530;Dbxref=NCBI_GP:WJG80161.1;Name=WJG80161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=PUW38_15530;product=hypothetical protein;protein_id=WJG80161.1;transl_table=11 CP118116.1 Genbank gene 3183003 3183407 . + . ID=gene-PUW38_15535;Name=PUW38_15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15535 CP118116.1 Protein Homology CDS 3183003 3183407 . + 0 ID=cds-WJG80162.1;Parent=gene-PUW38_15535;Dbxref=NCBI_GP:WJG80162.1;Name=WJG80162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=PUW38_15535;product=cytoplasmic protein;protein_id=WJG80162.1;transl_table=11 CP118116.1 Genbank gene 3183531 3184415 . + . ID=gene-PUW38_15540;Name=PUW38_15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15540 CP118116.1 Protein Homology CDS 3183531 3184415 . + 0 ID=cds-WJG80163.1;Parent=gene-PUW38_15540;Dbxref=NCBI_GP:WJG80163.1;Name=WJG80163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=PUW38_15540;product=SDR family oxidoreductase;protein_id=WJG80163.1;transl_table=11 CP118116.1 Genbank pseudogene 3184528 3184952 . - . ID=gene-PUW38_15545;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=pseudogene;locus_tag=PUW38_15545;pseudo=true CP118116.1 Protein Homology CDS 3184528 3184952 . - 0 ID=cds-PUW38_15545;Parent=gene-PUW38_15545;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=PUW38_15545;product=TonB system transport protein ExbD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3184959 3185693 . - . ID=gene-PUW38_15550;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=PUW38_15550 CP118116.1 Protein Homology CDS 3184959 3185693 . - 0 ID=cds-WJG80164.1;Parent=gene-PUW38_15550;Dbxref=NCBI_GP:WJG80164.1;Name=WJG80164.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=PUW38_15550;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WJG80164.1;transl_table=11 CP118116.1 Genbank gene 3185945 3187132 . + . ID=gene-PUW38_15555;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=PUW38_15555 CP118116.1 Protein Homology CDS 3185945 3187132 . + 0 ID=cds-WJG80165.1;Parent=gene-PUW38_15555;Dbxref=NCBI_GP:WJG80165.1;Name=WJG80165.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=PUW38_15555;product=cystathionine beta-lyase;protein_id=WJG80165.1;transl_table=11 CP118116.1 Genbank gene 3187272 3187931 . + . ID=gene-PUW38_15560;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=PUW38_15560 CP118116.1 Protein Homology CDS 3187272 3187931 . + 0 ID=cds-WJG80166.1;Parent=gene-PUW38_15560;Dbxref=NCBI_GP:WJG80166.1;Name=WJG80166.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=PUW38_15560;product=DedA family general envelope maintenance protein YghB;protein_id=WJG80166.1;transl_table=11 CP118116.1 Genbank gene 3187995 3188894 . - . ID=gene-PUW38_15565;Name=PUW38_15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15565 CP118116.1 Protein Homology CDS 3187995 3188894 . - 0 ID=cds-WJG83262.1;Parent=gene-PUW38_15565;Dbxref=NCBI_GP:WJG83262.1;Name=WJG83262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=PUW38_15565;product=AraC family transcriptional regulator;protein_id=WJG83262.1;transl_table=11 CP118116.1 Genbank gene 3189086 3190249 . + . ID=gene-PUW38_15570;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=PUW38_15570 CP118116.1 Protein Homology CDS 3189086 3190249 . + 0 ID=cds-WJG80167.1;Parent=gene-PUW38_15570;Dbxref=NCBI_GP:WJG80167.1;Name=WJG80167.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=PUW38_15570;product=alcohol dehydrogenase;protein_id=WJG80167.1;transl_table=11 CP118116.1 Genbank pseudogene 3190355 3191181 . + . ID=gene-PUW38_15575;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=pseudogene;locus_tag=PUW38_15575;pseudo=true CP118116.1 Protein Homology CDS 3190355 3191181 . + 0 ID=cds-PUW38_15575;Parent=gene-PUW38_15575;Note=frameshifted;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=PUW38_15575;product=2%2C5-didehydrogluconate reductase DkgA;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3191337 3192822 . + . ID=gene-PUW38_15580;Name=PUW38_15580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15580;pseudo=true CP118116.1 Protein Homology CDS 3191337 3192822 . + 0 ID=cds-PUW38_15580;Parent=gene-PUW38_15580;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=PUW38_15580;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3192867 3193322 . + . ID=gene-PUW38_15585;Name=PUW38_15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15585 CP118116.1 Protein Homology CDS 3192867 3193322 . + 0 ID=cds-WJG80168.1;Parent=gene-PUW38_15585;Dbxref=NCBI_GP:WJG80168.1;Name=WJG80168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=PUW38_15585;product=HIT family protein;protein_id=WJG80168.1;transl_table=11 CP118116.1 Genbank gene 3193480 3193674 . - . ID=gene-PUW38_15590;Name=PUW38_15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15590 CP118116.1 GeneMarkS-2+ CDS 3193480 3193674 . - 0 ID=cds-WJG80169.1;Parent=gene-PUW38_15590;Dbxref=NCBI_GP:WJG80169.1;Name=WJG80169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_15590;product=hypothetical protein;protein_id=WJG80169.1;transl_table=11 CP118116.1 Genbank pseudogene 3193877 3196047 . - . ID=gene-PUW38_15595;Name=PUW38_15595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15595;pseudo=true CP118116.1 Protein Homology CDS 3193877 3196047 . - 0 ID=cds-PUW38_15595;Parent=gene-PUW38_15595;Note=frameshifted;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=PUW38_15595;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3196534 3197517 . + . ID=gene-PUW38_15600;Name=PUW38_15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15600 CP118116.1 Protein Homology CDS 3196534 3197517 . + 0 ID=cds-WJG80170.1;Parent=gene-PUW38_15600;Dbxref=NCBI_GP:WJG80170.1;Name=WJG80170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=PUW38_15600;product=TRAP transporter substrate-binding protein;protein_id=WJG80170.1;transl_table=11 CP118116.1 Genbank gene 3197559 3198041 . + . ID=gene-PUW38_15605;Name=PUW38_15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15605 CP118116.1 Protein Homology CDS 3197559 3198041 . + 0 ID=cds-WJG80171.1;Parent=gene-PUW38_15605;Dbxref=NCBI_GP:WJG80171.1;Name=WJG80171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=PUW38_15605;product=TRAP transporter small permease;protein_id=WJG80171.1;transl_table=11 CP118116.1 Genbank gene 3198052 3199359 . + . ID=gene-PUW38_15610;Name=PUW38_15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15610 CP118116.1 Protein Homology CDS 3198052 3199359 . + 0 ID=cds-WJG80172.1;Parent=gene-PUW38_15610;Dbxref=NCBI_GP:WJG80172.1;Name=WJG80172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=PUW38_15610;product=TRAP transporter large permease subunit;protein_id=WJG80172.1;transl_table=11 CP118116.1 Genbank gene 3199403 3200815 . - . ID=gene-PUW38_15615;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=PUW38_15615 CP118116.1 Protein Homology CDS 3199403 3200815 . - 0 ID=cds-WJG80173.1;Parent=gene-PUW38_15615;Dbxref=NCBI_GP:WJG80173.1;Name=WJG80173.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=PUW38_15615;product=cell division protein FtsP;protein_id=WJG80173.1;transl_table=11 CP118116.1 Genbank gene 3200889 3201626 . - . ID=gene-PUW38_15620;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=PUW38_15620 CP118116.1 Protein Homology CDS 3200889 3201626 . - 0 ID=cds-WJG80174.1;Parent=gene-PUW38_15620;Dbxref=NCBI_GP:WJG80174.1;Name=WJG80174.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=PUW38_15620;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WJG80174.1;transl_table=11 CP118116.1 Genbank gene 3201882 3204140 . - . ID=gene-PUW38_15625;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=PUW38_15625 CP118116.1 Protein Homology CDS 3201882 3204140 . - 0 ID=cds-WJG80175.1;Parent=gene-PUW38_15625;Dbxref=NCBI_GP:WJG80175.1;Name=WJG80175.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=PUW38_15625;product=DNA topoisomerase IV subunit A;protein_id=WJG80175.1;transl_table=11 CP118116.1 Genbank pseudogene 3204251 3205117 . - . ID=gene-PUW38_15630;Name=PUW38_15630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15630;pseudo=true CP118116.1 Protein Homology CDS 3204251 3205117 . - 0 ID=cds-PUW38_15630;Parent=gene-PUW38_15630;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=PUW38_15630;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3205189 3205581 . - . ID=gene-PUW38_15635;Name=PUW38_15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15635 CP118116.1 Protein Homology CDS 3205189 3205581 . - 0 ID=cds-WJG80176.1;Parent=gene-PUW38_15635;Dbxref=NCBI_GP:WJG80176.1;Name=WJG80176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=PUW38_15635;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WJG80176.1;transl_table=11 CP118116.1 Genbank gene 3205733 3206392 . + . ID=gene-PUW38_15640;Name=PUW38_15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15640 CP118116.1 Protein Homology CDS 3205733 3206392 . + 0 ID=cds-WJG80177.1;Parent=gene-PUW38_15640;Dbxref=NCBI_GP:WJG80177.1;Name=WJG80177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=PUW38_15640;product=two-component system response regulator QseB;protein_id=WJG80177.1;transl_table=11 CP118116.1 Genbank gene 3206389 3207738 . + . ID=gene-PUW38_15645;Name=PUW38_15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15645 CP118116.1 Protein Homology CDS 3206389 3207738 . + 0 ID=cds-WJG80178.1;Parent=gene-PUW38_15645;Dbxref=NCBI_GP:WJG80178.1;Name=WJG80178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=PUW38_15645;product=two-component system sensor histidine kinase QseC;protein_id=WJG80178.1;transl_table=11 CP118116.1 Genbank gene 3207845 3208426 . + . ID=gene-PUW38_15650;Name=PUW38_15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15650 CP118116.1 Protein Homology CDS 3207845 3208426 . + 0 ID=cds-WJG80179.1;Parent=gene-PUW38_15650;Dbxref=NCBI_GP:WJG80179.1;Name=WJG80179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=PUW38_15650;product=NAD(P)H-dependent oxidoreductase;protein_id=WJG80179.1;transl_table=11 CP118116.1 Genbank gene 3208458 3208772 . + . ID=gene-PUW38_15655;Name=PUW38_15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15655 CP118116.1 Protein Homology CDS 3208458 3208772 . + 0 ID=cds-WJG80180.1;Parent=gene-PUW38_15655;Dbxref=NCBI_GP:WJG80180.1;Name=WJG80180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=PUW38_15655;product=putative quinol monooxygenase;protein_id=WJG80180.1;transl_table=11 CP118116.1 Genbank gene 3208897 3210789 . - . ID=gene-PUW38_15660;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=PUW38_15660 CP118116.1 Protein Homology CDS 3208897 3210789 . - 0 ID=cds-WJG80181.1;Parent=gene-PUW38_15660;Dbxref=NCBI_GP:WJG80181.1;Name=WJG80181.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=PUW38_15660;product=DNA topoisomerase IV subunit B;protein_id=WJG80181.1;transl_table=11 CP118116.1 Genbank gene 3210817 3211398 . - . ID=gene-PUW38_15665;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=PUW38_15665 CP118116.1 Protein Homology CDS 3210817 3211398 . - 0 ID=cds-WJG80182.1;Parent=gene-PUW38_15665;Dbxref=NCBI_GP:WJG80182.1;Name=WJG80182.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=PUW38_15665;product=esterase YqiA;protein_id=WJG80182.1;transl_table=11 CP118116.1 Genbank gene 3211398 3212225 . - . ID=gene-PUW38_15670;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=PUW38_15670 CP118116.1 Protein Homology CDS 3211398 3212225 . - 0 ID=cds-WJG80183.1;Parent=gene-PUW38_15670;Dbxref=NCBI_GP:WJG80183.1;Name=WJG80183.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=PUW38_15670;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WJG80183.1;transl_table=11 CP118116.1 Genbank gene 3212250 3212672 . - . ID=gene-PUW38_15675;Name=PUW38_15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15675 CP118116.1 Protein Homology CDS 3212250 3212672 . - 0 ID=cds-WJG80184.1;Parent=gene-PUW38_15675;Dbxref=NCBI_GP:WJG80184.1;Name=WJG80184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=PUW38_15675;product=DUF1249 family protein;protein_id=WJG80184.1;transl_table=11 CP118116.1 Genbank gene 3212669 3213301 . - . ID=gene-PUW38_15680;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=PUW38_15680 CP118116.1 Protein Homology CDS 3212669 3213301 . - 0 ID=cds-WJG80185.1;Parent=gene-PUW38_15680;Dbxref=NCBI_GP:WJG80185.1;Name=WJG80185.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=PUW38_15680;product=ADP-ribose diphosphatase;protein_id=WJG80185.1;transl_table=11 CP118116.1 Genbank gene 3213502 3214977 . + . ID=gene-PUW38_15685;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=PUW38_15685 CP118116.1 Protein Homology CDS 3213502 3214977 . + 0 ID=cds-WJG80186.1;Parent=gene-PUW38_15685;Dbxref=NCBI_GP:WJG80186.1;Name=WJG80186.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=PUW38_15685;product=outer membrane channel protein TolC;protein_id=WJG80186.1;transl_table=11 CP118116.1 Genbank gene 3215190 3215861 . + . ID=gene-PUW38_15690;Name=PUW38_15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15690 CP118116.1 Protein Homology CDS 3215190 3215861 . + 0 ID=cds-WJG80187.1;Parent=gene-PUW38_15690;Dbxref=NCBI_GP:WJG80187.1;Name=WJG80187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=PUW38_15690;product=DUF1190 family protein;protein_id=WJG80187.1;transl_table=11 CP118116.1 Genbank gene 3215867 3217030 . + . ID=gene-PUW38_15695;Name=PUW38_15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15695 CP118116.1 Protein Homology CDS 3215867 3217030 . + 0 ID=cds-WJG80188.1;Parent=gene-PUW38_15695;Dbxref=NCBI_GP:WJG80188.1;Name=WJG80188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=PUW38_15695;product=glutathionylspermidine synthase family protein;protein_id=WJG80188.1;transl_table=11 CP118116.1 Genbank gene 3217092 3217880 . - . ID=gene-PUW38_15700;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=PUW38_15700 CP118116.1 Protein Homology CDS 3217092 3217880 . - 0 ID=cds-WJG80189.1;Parent=gene-PUW38_15700;Dbxref=NCBI_GP:WJG80189.1;Name=WJG80189.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=PUW38_15700;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WJG80189.1;transl_table=11 CP118116.1 Genbank gene 3218021 3218794 . + . ID=gene-PUW38_15705;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=PUW38_15705 CP118116.1 Protein Homology CDS 3218021 3218794 . + 0 ID=cds-WJG80190.1;Parent=gene-PUW38_15705;Dbxref=NCBI_GP:WJG80190.1;Name=WJG80190.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=PUW38_15705;product=zinc transporter ZupT;protein_id=WJG80190.1;transl_table=11 CP118116.1 Genbank gene 3218861 3219037 . - . ID=gene-PUW38_15710;Name=PUW38_15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15710 CP118116.1 Protein Homology CDS 3218861 3219037 . - 0 ID=cds-WJG80191.1;Parent=gene-PUW38_15710;Dbxref=NCBI_GP:WJG80191.1;Name=WJG80191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=PUW38_15710;product=hypothetical protein;protein_id=WJG80191.1;transl_table=11 CP118116.1 Genbank gene 3219437 3221233 . + . ID=gene-PUW38_15715;Name=PUW38_15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15715 CP118116.1 Protein Homology CDS 3219437 3221233 . + 0 ID=cds-WJG80192.1;Parent=gene-PUW38_15715;Dbxref=NCBI_GP:WJG80192.1;Name=WJG80192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=PUW38_15715;product=aryl-sulfate sulfotransferase;protein_id=WJG80192.1;transl_table=11 CP118116.1 Genbank gene 3221253 3221924 . + . ID=gene-PUW38_15720;Name=PUW38_15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15720 CP118116.1 Protein Homology CDS 3221253 3221924 . + 0 ID=cds-WJG80193.1;Parent=gene-PUW38_15720;Dbxref=NCBI_GP:WJG80193.1;Name=WJG80193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=PUW38_15720;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WJG80193.1;transl_table=11 CP118116.1 Genbank gene 3221939 3222616 . + . ID=gene-PUW38_15725;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=PUW38_15725 CP118116.1 Protein Homology CDS 3221939 3222616 . + 0 ID=cds-WJG80194.1;Parent=gene-PUW38_15725;Dbxref=NCBI_GP:WJG80194.1;Name=WJG80194.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=PUW38_15725;product=protein-disulfide oxidoreductase DsbI;protein_id=WJG80194.1;transl_table=11 CP118116.1 Genbank gene 3222786 3223439 . - . ID=gene-PUW38_15730;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=PUW38_15730 CP118116.1 Protein Homology CDS 3222786 3223439 . - 0 ID=cds-WJG80195.1;Parent=gene-PUW38_15730;Dbxref=NCBI_GP:WJG80195.1;Name=WJG80195.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=PUW38_15730;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WJG80195.1;transl_table=11 CP118116.1 cmsearch riboswitch 3223545 3223741 . - . ID=id-CP118116.1:3223545..3223741;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118116.1 Genbank gene 3223874 3224170 . + . ID=gene-PUW38_15735;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;locus_tag=PUW38_15735 CP118116.1 Protein Homology CDS 3223874 3224170 . + 0 ID=cds-WJG80196.1;Parent=gene-PUW38_15735;Dbxref=NCBI_GP:WJG80196.1;Name=WJG80196.1;gbkey=CDS;gene=ubiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=PUW38_15735;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WJG80196.1;transl_table=11 CP118116.1 Genbank gene 3224245 3224454 . - . ID=gene-PUW38_15740;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=PUW38_15740 CP118116.1 Protein Homology CDS 3224245 3224454 . - 0 ID=cds-WJG80197.1;Parent=gene-PUW38_15740;Dbxref=NCBI_GP:WJG80197.1;Name=WJG80197.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=PUW38_15740;product=cell surface composition regulator GlgS;protein_id=WJG80197.1;transl_table=11 CP118116.1 Genbank gene 3224712 3225332 . + . ID=gene-PUW38_15745;Name=PUW38_15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15745 CP118116.1 Protein Homology CDS 3224712 3225332 . + 0 ID=cds-WJG80198.1;Parent=gene-PUW38_15745;Dbxref=NCBI_GP:WJG80198.1;Name=WJG80198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=PUW38_15745;product=DUF1449 family protein;protein_id=WJG80198.1;transl_table=11 CP118116.1 Genbank gene 3225351 3227030 . + . ID=gene-PUW38_15750;Name=PUW38_15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15750 CP118116.1 Protein Homology CDS 3225351 3227030 . + 0 ID=cds-WJG80199.1;Parent=gene-PUW38_15750;Dbxref=NCBI_GP:WJG80199.1;Name=WJG80199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=PUW38_15750;product=flotillin family protein;protein_id=WJG80199.1;transl_table=11 CP118116.1 Genbank gene 3227270 3227329 . + . ID=gene-PUW38_15755;Name=PUW38_15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15755 CP118116.1 Protein Homology CDS 3227270 3227329 . + 0 ID=cds-WJG83263.1;Parent=gene-PUW38_15755;Dbxref=NCBI_GP:WJG83263.1;Name=WJG83263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=PUW38_15755;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WJG83263.1;transl_table=11 CP118116.1 Genbank gene 3227489 3228922 . - . ID=gene-PUW38_15760;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=PUW38_15760 CP118116.1 Protein Homology CDS 3227489 3228922 . - 0 ID=cds-WJG80200.1;Parent=gene-PUW38_15760;Dbxref=NCBI_GP:WJG80200.1;Name=WJG80200.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=PUW38_15760;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WJG80200.1;transl_table=11 CP118116.1 Genbank pseudogene 3228970 3231811 . - . ID=gene-PUW38_15765;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=pseudogene;locus_tag=PUW38_15765;pseudo=true CP118116.1 Protein Homology CDS 3228970 3231811 . - 0 ID=cds-PUW38_15765;Parent=gene-PUW38_15765;Note=frameshifted;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=PUW38_15765;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3231929 3233230 . - . ID=gene-PUW38_15770;Name=PUW38_15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15770 CP118116.1 Protein Homology CDS 3231929 3233230 . - 0 ID=cds-WJG80201.1;Parent=gene-PUW38_15770;Dbxref=NCBI_GP:WJG80201.1;Name=WJG80201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=PUW38_15770;product=inorganic triphosphatase;protein_id=WJG80201.1;transl_table=11 CP118116.1 Genbank gene 3233472 3234086 . + . ID=gene-PUW38_15775;Name=PUW38_15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15775 CP118116.1 Protein Homology CDS 3233472 3234086 . + 0 ID=cds-WJG80202.1;Parent=gene-PUW38_15775;Dbxref=NCBI_GP:WJG80202.1;Name=WJG80202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=PUW38_15775;product=TIGR04211 family SH3 domain-containing protein;protein_id=WJG80202.1;transl_table=11 CP118116.1 Genbank gene 3234149 3235390 . + . ID=gene-PUW38_15780;Name=PUW38_15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15780 CP118116.1 Protein Homology CDS 3234149 3235390 . + 0 ID=cds-WJG80203.1;Parent=gene-PUW38_15780;Dbxref=NCBI_GP:WJG80203.1;Name=WJG80203.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=PUW38_15780;product=multifunctional CCA addition/repair protein;protein_id=WJG80203.1;transl_table=11 CP118116.1 Genbank gene 3235494 3236315 . - . ID=gene-PUW38_15785;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=PUW38_15785 CP118116.1 Protein Homology CDS 3235494 3236315 . - 0 ID=cds-WJG80204.1;Parent=gene-PUW38_15785;Dbxref=NCBI_GP:WJG80204.1;Name=WJG80204.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=PUW38_15785;product=undecaprenyl-diphosphate phosphatase;protein_id=WJG80204.1;transl_table=11 CP118116.1 Genbank gene 3236413 3236772 . - . ID=gene-PUW38_15790;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=PUW38_15790 CP118116.1 Protein Homology CDS 3236413 3236772 . - 0 ID=cds-WJG80205.1;Parent=gene-PUW38_15790;Dbxref=NCBI_GP:WJG80205.1;Name=WJG80205.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=PUW38_15790;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WJG80205.1;transl_table=11 CP118116.1 Genbank gene 3236879 3237490 . + . ID=gene-PUW38_15795;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=PUW38_15795 CP118116.1 Protein Homology CDS 3236879 3237490 . + 0 ID=cds-WJG80206.1;Parent=gene-PUW38_15795;Dbxref=NCBI_GP:WJG80206.1;Name=WJG80206.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=PUW38_15795;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WJG80206.1;transl_table=11 CP118116.1 Genbank pseudogene 3237489 3237617 . + . ID=gene-PUW38_15800;Name=PUW38_15800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15800;pseudo=true CP118116.1 Protein Homology CDS 3237489 3237617 . + 0 ID=cds-PUW38_15800;Parent=gene-PUW38_15800;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=PUW38_15800;product=fumarate hydratase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3237740 3238753 . - . ID=gene-PUW38_15805;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=PUW38_15805 CP118116.1 Protein Homology CDS 3237740 3238753 . - 0 ID=cds-WJG80207.1;Parent=gene-PUW38_15805;Dbxref=NCBI_GP:WJG80207.1;Name=WJG80207.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=PUW38_15805;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WJG80207.1;transl_table=11 CP118116.1 Genbank gene 3238981 3239196 . + . ID=gene-PUW38_15810;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=PUW38_15810 CP118116.1 Protein Homology CDS 3238981 3239196 . + 0 ID=cds-WJG80208.1;Parent=gene-PUW38_15810;Dbxref=NCBI_GP:WJG80208.1;Name=WJG80208.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=PUW38_15810;product=30S ribosomal protein S21;protein_id=WJG80208.1;transl_table=11 CP118116.1 Genbank gene 3239431 3241176 . + . ID=gene-PUW38_15815;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=PUW38_15815 CP118116.1 Protein Homology CDS 3239431 3241176 . + 0 ID=cds-WJG80209.1;Parent=gene-PUW38_15815;Dbxref=NCBI_GP:WJG80209.1;Name=WJG80209.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=PUW38_15815;product=DNA primase;protein_id=WJG80209.1;transl_table=11 CP118116.1 Genbank gene 3241191 3243173 . + . ID=gene-PUW38_15820;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=PUW38_15820 CP118116.1 Protein Homology CDS 3241191 3243173 . + 0 ID=cds-WJG80210.1;Parent=gene-PUW38_15820;Dbxref=NCBI_GP:WJG80210.1;Name=WJG80210.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=PUW38_15820;product=RNA polymerase sigma factor RpoD;protein_id=WJG80210.1;transl_table=11 CP118116.1 Genbank gene 3243297 3243803 . - . ID=gene-PUW38_15825;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=PUW38_15825 CP118116.1 Protein Homology CDS 3243297 3243803 . - 0 ID=cds-WJG80211.1;Parent=gene-PUW38_15825;Dbxref=NCBI_GP:WJG80211.1;Name=WJG80211.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=PUW38_15825;product=G/U mismatch-specific DNA glycosylase;protein_id=WJG80211.1;transl_table=11 CP118116.1 Genbank gene 3243929 3244004 . + . ID=gene-PUW38_15830;Name=PUW38_15830;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_15830 CP118116.1 tRNAscan-SE tRNA 3243929 3244004 . + . ID=rna-PUW38_15830;Parent=gene-PUW38_15830;anticodon=(pos:3243962..3243964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_15830;product=tRNA-Ile CP118116.1 tRNAscan-SE exon 3243929 3244004 . + . ID=exon-PUW38_15830-1;Parent=rna-PUW38_15830;anticodon=(pos:3243962..3243964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_15830;product=tRNA-Ile CP118116.1 Genbank gene 3244084 3244851 . - . ID=gene-PUW38_15835;Name=PUW38_15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15835 CP118116.1 Protein Homology CDS 3244084 3244851 . - 0 ID=cds-WJG80212.1;Parent=gene-PUW38_15835;Dbxref=NCBI_GP:WJG80212.1;Name=WJG80212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=PUW38_15835;product=siderophore-interacting protein;protein_id=WJG80212.1;transl_table=11 CP118116.1 Genbank pseudogene 3245083 3245729 . + . ID=gene-PUW38_15840;Name=PUW38_15840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15840;pseudo=true CP118116.1 Protein Homology CDS 3245083 3245729 . + 0 ID=cds-PUW38_15840;Parent=gene-PUW38_15840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=PUW38_15840;product=PadR family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3245726 3247294 . - . ID=gene-PUW38_15845;Name=PUW38_15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15845 CP118116.1 Protein Homology CDS 3245726 3247294 . - 0 ID=cds-WJG80213.1;Parent=gene-PUW38_15845;Dbxref=NCBI_GP:WJG80213.1;Name=WJG80213.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=PUW38_15845;product=methyl-accepting chemotaxis protein;protein_id=WJG80213.1;transl_table=11 CP118116.1 Genbank gene 3247681 3249201 . - . ID=gene-PUW38_15850;Name=PUW38_15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15850 CP118116.1 Protein Homology CDS 3247681 3249201 . - 0 ID=cds-WJG80214.1;Parent=gene-PUW38_15850;Dbxref=NCBI_GP:WJG80214.1;Name=WJG80214.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=PUW38_15850;product=methyl-accepting chemotaxis protein;protein_id=WJG80214.1;transl_table=11 CP118116.1 Genbank gene 3249631 3251010 . + . ID=gene-PUW38_15855;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=PUW38_15855 CP118116.1 Protein Homology CDS 3249631 3251010 . + 0 ID=cds-WJG80215.1;Parent=gene-PUW38_15855;Dbxref=NCBI_GP:WJG80215.1;Name=WJG80215.1;Ontology_term=GO:0009447,GO:0033094;gbkey=CDS;gene=ygjG;go_function=butane-1%2C4-diamine:2-oxoglutarate aminotransferase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=PUW38_15855;product=putrescine aminotransferase;protein_id=WJG80215.1;transl_table=11 CP118116.1 Genbank gene 3251181 3253199 . + . ID=gene-PUW38_15860;Name=PUW38_15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15860 CP118116.1 Protein Homology CDS 3251181 3253199 . + 0 ID=cds-WJG80216.1;Parent=gene-PUW38_15860;Dbxref=NCBI_GP:WJG80216.1;Name=WJG80216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=PUW38_15860;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WJG80216.1;transl_table=11 CP118116.1 Genbank gene 3253280 3254416 . - . ID=gene-PUW38_15865;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=PUW38_15865 CP118116.1 Protein Homology CDS 3253280 3254416 . - 0 ID=cds-WJG80217.1;Parent=gene-PUW38_15865;Dbxref=NCBI_GP:WJG80217.1;Name=WJG80217.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=PUW38_15865;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WJG80217.1;transl_table=11 CP118116.1 Genbank gene 3254502 3254999 . + . ID=gene-PUW38_15870;Name=PUW38_15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15870 CP118116.1 Protein Homology CDS 3254502 3254999 . + 0 ID=cds-WJG80218.1;Parent=gene-PUW38_15870;Dbxref=NCBI_GP:WJG80218.1;Name=WJG80218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=PUW38_15870;product=M48 family metallopeptidase;protein_id=WJG80218.1;transl_table=11 CP118116.1 Genbank gene 3255151 3255843 . + . ID=gene-PUW38_15875;Name=PUW38_15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15875 CP118116.1 Protein Homology CDS 3255151 3255843 . + 0 ID=cds-WJG80219.1;Parent=gene-PUW38_15875;Dbxref=NCBI_GP:WJG80219.1;Name=WJG80219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=PUW38_15875;product=vancomycin high temperature exclusion protein;protein_id=WJG80219.1;transl_table=11 CP118116.1 Genbank pseudogene 3255932 3256930 . + . ID=gene-PUW38_15880;Name=PUW38_15880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_15880;pseudo=true CP118116.1 Protein Homology CDS 3255932 3256930 . + 0 ID=cds-PUW38_15880;Parent=gene-PUW38_15880;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=PUW38_15880;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3257200 3258168 . + . ID=gene-PUW38_15885;Name=PUW38_15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15885 CP118116.1 Protein Homology CDS 3257200 3258168 . + 0 ID=cds-WJG83264.1;Parent=gene-PUW38_15885;Dbxref=NCBI_GP:WJG83264.1;Name=WJG83264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=PUW38_15885;product=TerC family protein;protein_id=WJG83264.1;transl_table=11 CP118116.1 Genbank pseudogene 3258422 3259666 . + . ID=gene-PUW38_15890;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=pseudogene;locus_tag=PUW38_15890;pseudo=true CP118116.1 Protein Homology CDS 3258422 3259666 . + 0 ID=cds-PUW38_15890;Parent=gene-PUW38_15890;Note=internal stop;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=PUW38_15890;product=serine/threonine transporter SstT;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3260116 3260778 . + . ID=gene-PUW38_15895;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=PUW38_15895 CP118116.1 Protein Homology CDS 3260116 3260778 . + 0 ID=cds-WJG80220.1;Parent=gene-PUW38_15895;Dbxref=NCBI_GP:WJG80220.1;Name=WJG80220.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=PUW38_15895;product=DedA family general envelope maintenance protein YqjA;protein_id=WJG80220.1;transl_table=11 CP118116.1 Genbank gene 3260782 3261165 . + . ID=gene-PUW38_15900;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=PUW38_15900 CP118116.1 Protein Homology CDS 3260782 3261165 . + 0 ID=cds-WJG80221.1;Parent=gene-PUW38_15900;Dbxref=NCBI_GP:WJG80221.1;Name=WJG80221.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=PUW38_15900;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WJG80221.1;transl_table=11 CP118116.1 Genbank gene 3261310 3261678 . + . ID=gene-PUW38_15905;Name=PUW38_15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15905 CP118116.1 Protein Homology CDS 3261310 3261678 . + 0 ID=cds-WJG80222.1;Parent=gene-PUW38_15905;Dbxref=NCBI_GP:WJG80222.1;Name=WJG80222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=PUW38_15905;product=DUF1090 domain-containing protein;protein_id=WJG80222.1;transl_table=11 CP118116.1 Genbank gene 3261720 3262025 . + . ID=gene-PUW38_15910;Name=PUW38_15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15910 CP118116.1 Protein Homology CDS 3261720 3262025 . + 0 ID=cds-WJG80223.1;Parent=gene-PUW38_15910;Dbxref=NCBI_GP:WJG80223.1;Name=WJG80223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=PUW38_15910;product=YqjD family protein;protein_id=WJG80223.1;transl_table=11 CP118116.1 Genbank gene 3262028 3262426 . + . ID=gene-PUW38_15915;Name=PUW38_15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15915 CP118116.1 Protein Homology CDS 3262028 3262426 . + 0 ID=cds-WJG80224.1;Parent=gene-PUW38_15915;Dbxref=NCBI_GP:WJG80224.1;Name=WJG80224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=PUW38_15915;product=phage holin family protein;protein_id=WJG80224.1;transl_table=11 CP118116.1 Genbank gene 3262423 3262722 . + . ID=gene-PUW38_15920;Name=PUW38_15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15920 CP118116.1 Protein Homology CDS 3262423 3262722 . + 0 ID=cds-WJG80225.1;Parent=gene-PUW38_15920;Dbxref=NCBI_GP:WJG80225.1;Name=WJG80225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=PUW38_15920;product=YqjK-like family protein;protein_id=WJG80225.1;transl_table=11 CP118116.1 Genbank gene 3262970 3263362 . + . ID=gene-PUW38_15925;Name=PUW38_15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15925 CP118116.1 Protein Homology CDS 3262970 3263362 . + 0 ID=cds-WJG80226.1;Parent=gene-PUW38_15925;Dbxref=NCBI_GP:WJG80226.1;Name=WJG80226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=PUW38_15925;product=DoxX family protein;protein_id=WJG80226.1;transl_table=11 CP118116.1 Genbank gene 3263430 3264416 . + . ID=gene-PUW38_15930;Name=PUW38_15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15930 CP118116.1 Protein Homology CDS 3263430 3264416 . + 0 ID=cds-WJG80227.1;Parent=gene-PUW38_15930;Dbxref=NCBI_GP:WJG80227.1;Name=WJG80227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=PUW38_15930;product=glutathione S-transferase family protein;protein_id=WJG80227.1;transl_table=11 CP118116.1 Genbank gene 3264540 3264905 . + . ID=gene-PUW38_15935;Name=PUW38_15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15935 CP118116.1 Protein Homology CDS 3264540 3264905 . + 0 ID=cds-WJG80228.1;Parent=gene-PUW38_15935;Dbxref=NCBI_GP:WJG80228.1;Name=WJG80228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=PUW38_15935;product=DUF805 domain-containing protein;protein_id=WJG80228.1;transl_table=11 CP118116.1 Genbank gene 3264944 3265840 . - . ID=gene-PUW38_15940;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=PUW38_15940 CP118116.1 Protein Homology CDS 3264944 3265840 . - 0 ID=cds-WJG80229.1;Parent=gene-PUW38_15940;Dbxref=NCBI_GP:WJG80229.1;Name=WJG80229.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=PUW38_15940;product=DNA-binding transcriptional regulator YhaJ;protein_id=WJG80229.1;transl_table=11 CP118116.1 Genbank gene 3265945 3266646 . + . ID=gene-PUW38_15945;Name=PUW38_15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15945 CP118116.1 Protein Homology CDS 3265945 3266646 . + 0 ID=cds-WJG80230.1;Parent=gene-PUW38_15945;Dbxref=NCBI_GP:WJG80230.1;Name=WJG80230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=PUW38_15945;product=pirin family protein;protein_id=WJG80230.1;transl_table=11 CP118116.1 Genbank gene 3266670 3266834 . + . ID=gene-PUW38_15950;Name=PUW38_15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15950 CP118116.1 Protein Homology CDS 3266670 3266834 . + 0 ID=cds-WJG80231.1;Parent=gene-PUW38_15950;Dbxref=NCBI_GP:WJG80231.1;Name=WJG80231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=PUW38_15950;product=hypothetical protein;protein_id=WJG80231.1;transl_table=11 CP118116.1 Genbank gene 3266947 3268257 . - . ID=gene-PUW38_15955;Name=PUW38_15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15955 CP118116.1 Protein Homology CDS 3266947 3268257 . - 0 ID=cds-WJG80232.1;Parent=gene-PUW38_15955;Dbxref=NCBI_GP:WJG80232.1;Name=WJG80232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=PUW38_15955;product=serine dehydratase subunit alpha family protein;protein_id=WJG80232.1;transl_table=11 CP118116.1 Genbank gene 3268283 3269614 . - . ID=gene-PUW38_15960;Name=PUW38_15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_15960 CP118116.1 Protein Homology CDS 3268283 3269614 . - 0 ID=cds-WJG80233.1;Parent=gene-PUW38_15960;Dbxref=NCBI_GP:WJG80233.1;Name=WJG80233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=PUW38_15960;product=amino acid permease;protein_id=WJG80233.1;transl_table=11 CP118116.1 Genbank pseudogene 3269929 3271292 . - . ID=gene-PUW38_15965;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=pseudogene;locus_tag=PUW38_15965;pseudo=true CP118116.1 Protein Homology CDS 3269929 3271292 . - 0 ID=cds-PUW38_15965;Parent=gene-PUW38_15965;Note=frameshifted;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=PUW38_15965;product=L-serine ammonia-lyase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3271362 3273655 . - . ID=gene-PUW38_15970;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=PUW38_15970;pseudo=true CP118116.1 Protein Homology CDS 3271362 3273655 . - 0 ID=cds-PUW38_15970;Parent=gene-PUW38_15970;Note=frameshifted;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=PUW38_15970;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3273688 3274896 . - . ID=gene-PUW38_15975;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=PUW38_15975 CP118116.1 Protein Homology CDS 3273688 3274896 . - 0 ID=cds-WJG80234.1;Parent=gene-PUW38_15975;Dbxref=NCBI_GP:WJG80234.1;Name=WJG80234.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=PUW38_15975;product=propionate kinase;protein_id=WJG80234.1;transl_table=11 CP118116.1 Genbank gene 3274963 3276294 . - . ID=gene-PUW38_15980;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=PUW38_15980 CP118116.1 Protein Homology CDS 3274963 3276294 . - 0 ID=cds-WJG80235.1;Parent=gene-PUW38_15980;Dbxref=NCBI_GP:WJG80235.1;Name=WJG80235.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=PUW38_15980;product=threonine/serine transporter TdcC;protein_id=WJG80235.1;transl_table=11 CP118116.1 Genbank gene 3276315 3277304 . - . ID=gene-PUW38_15985;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=PUW38_15985 CP118116.1 Protein Homology CDS 3276315 3277304 . - 0 ID=cds-WJG80236.1;Parent=gene-PUW38_15985;Dbxref=NCBI_GP:WJG80236.1;Name=WJG80236.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=L-threonine ammonia-lyase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=PUW38_15985;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WJG80236.1;transl_table=11 CP118116.1 Genbank gene 3277402 3278340 . - . ID=gene-PUW38_15990;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=PUW38_15990 CP118116.1 Protein Homology CDS 3277402 3278340 . - 0 ID=cds-WJG80237.1;Parent=gene-PUW38_15990;Dbxref=NCBI_GP:WJG80237.1;Name=WJG80237.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=PUW38_15990;product=transcriptional regulator TdcA;protein_id=WJG80237.1;transl_table=11 CP118116.1 Genbank gene 3279052 3279426 . - . ID=gene-PUW38_15995;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=PUW38_15995 CP118116.1 cmsearch RNase_P_RNA 3279052 3279426 . - . ID=rna-PUW38_15995;Parent=gene-PUW38_15995;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_15995;product=RNase P RNA component class A CP118116.1 cmsearch exon 3279052 3279426 . - . ID=exon-PUW38_15995-1;Parent=rna-PUW38_15995;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_15995;product=RNase P RNA component class A CP118116.1 Genbank gene 3279459 3280604 . - . ID=gene-PUW38_16000;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=PUW38_16000 CP118116.1 Protein Homology CDS 3279459 3280604 . - 0 ID=cds-WJG80238.1;Parent=gene-PUW38_16000;Dbxref=NCBI_GP:WJG80238.1;Name=WJG80238.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=PUW38_16000;product=glycerate 2-kinase;protein_id=WJG80238.1;transl_table=11 CP118116.1 Genbank gene 3280702 3281592 . - . ID=gene-PUW38_16005;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=PUW38_16005 CP118116.1 Protein Homology CDS 3280702 3281592 . - 0 ID=cds-WJG80239.1;Parent=gene-PUW38_16005;Dbxref=NCBI_GP:WJG80239.1;Name=WJG80239.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=PUW38_16005;product=2-hydroxy-3-oxopropionate reductase;protein_id=WJG80239.1;transl_table=11 CP118116.1 Genbank gene 3281618 3282388 . - . ID=gene-PUW38_16010;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=PUW38_16010 CP118116.1 Protein Homology CDS 3281618 3282388 . - 0 ID=cds-WJG80240.1;Parent=gene-PUW38_16010;Dbxref=NCBI_GP:WJG80240.1;Name=WJG80240.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=PUW38_16010;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WJG80240.1;transl_table=11 CP118116.1 Genbank gene 3282918 3284489 . + . ID=gene-PUW38_16015;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=PUW38_16015 CP118116.1 Protein Homology CDS 3282918 3284489 . + 0 ID=cds-WJG80241.1;Parent=gene-PUW38_16015;Dbxref=NCBI_GP:WJG80241.1;Name=WJG80241.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=PUW38_16015;product=galactarate dehydratase;protein_id=WJG80241.1;transl_table=11 CP118116.1 Genbank gene 3284747 3285601 . + . ID=gene-PUW38_16020;Name=PUW38_16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16020 CP118116.1 Protein Homology CDS 3284747 3285601 . + 0 ID=cds-WJG80242.1;Parent=gene-PUW38_16020;Dbxref=NCBI_GP:WJG80242.1;Name=WJG80242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=PUW38_16020;product=tagatose bisphosphate family class II aldolase;protein_id=WJG80242.1;transl_table=11 CP118116.1 Genbank gene 3285720 3286991 . + . ID=gene-PUW38_16025;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=PUW38_16025 CP118116.1 Protein Homology CDS 3285720 3286991 . + 0 ID=cds-WJG80243.1;Parent=gene-PUW38_16025;Dbxref=NCBI_GP:WJG80243.1;Name=WJG80243.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=PUW38_16025;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WJG80243.1;transl_table=11 CP118116.1 Genbank gene 3287006 3287470 . + . ID=gene-PUW38_16030;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=PUW38_16030 CP118116.1 Protein Homology CDS 3287006 3287470 . + 0 ID=cds-WJG80244.1;Parent=gene-PUW38_16030;Dbxref=NCBI_GP:WJG80244.1;Name=WJG80244.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=PUW38_16030;product=PTS galactitol transporter subunit IIA;protein_id=WJG80244.1;transl_table=11 CP118116.1 Genbank gene 3287501 3287785 . + . ID=gene-PUW38_16035;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=PUW38_16035 CP118116.1 Protein Homology CDS 3287501 3287785 . + 0 ID=cds-WJG80245.1;Parent=gene-PUW38_16035;Dbxref=NCBI_GP:WJG80245.1;Name=WJG80245.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=PUW38_16035;product=PTS galactitol transporter subunit IIB;protein_id=WJG80245.1;transl_table=11 CP118116.1 Genbank gene 3287789 3289162 . + . ID=gene-PUW38_16040;Name=PUW38_16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16040 CP118116.1 Protein Homology CDS 3287789 3289162 . + 0 ID=cds-WJG80246.1;Parent=gene-PUW38_16040;Dbxref=NCBI_GP:WJG80246.1;Name=WJG80246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=PUW38_16040;product=PTS galactitol transporter subunit IIC;protein_id=WJG80246.1;transl_table=11 CP118116.1 Genbank gene 3289206 3290249 . + . ID=gene-PUW38_16045;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=PUW38_16045 CP118116.1 Protein Homology CDS 3289206 3290249 . + 0 ID=cds-WJG80247.1;Parent=gene-PUW38_16045;Dbxref=NCBI_GP:WJG80247.1;Name=WJG80247.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=PUW38_16045;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WJG80247.1;transl_table=11 CP118116.1 Genbank gene 3290360 3291133 . + . ID=gene-PUW38_16050;Name=PUW38_16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16050 CP118116.1 Protein Homology CDS 3290360 3291133 . + 0 ID=cds-WJG80248.1;Parent=gene-PUW38_16050;Dbxref=NCBI_GP:WJG80248.1;Name=WJG80248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=PUW38_16050;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG80248.1;transl_table=11 CP118116.1 Genbank gene 3291291 3292154 . - . ID=gene-PUW38_16055;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=PUW38_16055 CP118116.1 Protein Homology CDS 3291291 3292154 . - 0 ID=cds-WJG80249.1;Parent=gene-PUW38_16055;Dbxref=NCBI_GP:WJG80249.1;Name=WJG80249.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=PUW38_16055;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WJG80249.1;transl_table=11 CP118116.1 Genbank gene 3292218 3294260 . + . ID=gene-PUW38_16060;Name=PUW38_16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16060 CP118116.1 Protein Homology CDS 3292218 3294260 . + 0 ID=cds-WJG80250.1;Parent=gene-PUW38_16060;Dbxref=NCBI_GP:WJG80250.1;Name=WJG80250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=PUW38_16060;product=penicillin-binding protein activator;protein_id=WJG80250.1;transl_table=11 CP118116.1 Genbank gene 3294218 3294613 . + . ID=gene-PUW38_16065;Name=PUW38_16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16065 CP118116.1 Protein Homology CDS 3294218 3294613 . + 0 ID=cds-WJG80251.1;Parent=gene-PUW38_16065;Dbxref=NCBI_GP:WJG80251.1;Name=WJG80251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=PUW38_16065;product=YraN family protein;protein_id=WJG80251.1;transl_table=11 CP118116.1 Genbank gene 3294635 3295225 . + . ID=gene-PUW38_16070;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=PUW38_16070 CP118116.1 Protein Homology CDS 3294635 3295225 . + 0 ID=cds-WJG80252.1;Parent=gene-PUW38_16070;Dbxref=NCBI_GP:WJG80252.1;Name=WJG80252.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=PUW38_16070;product=DnaA initiator-associating protein DiaA;protein_id=WJG80252.1;transl_table=11 CP118116.1 Genbank gene 3295235 3295810 . + . ID=gene-PUW38_16075;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=PUW38_16075 CP118116.1 Protein Homology CDS 3295235 3295810 . + 0 ID=cds-WJG80253.1;Parent=gene-PUW38_16075;Dbxref=NCBI_GP:WJG80253.1;Name=WJG80253.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=PUW38_16075;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WJG80253.1;transl_table=11 CP118116.1 Genbank gene 3295877 3296512 . - . ID=gene-PUW38_16080;Name=PUW38_16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16080 CP118116.1 Protein Homology CDS 3295877 3296512 . - 0 ID=cds-WJG80254.1;Parent=gene-PUW38_16080;Dbxref=NCBI_GP:WJG80254.1;Name=WJG80254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=PUW38_16080;product=NAD(P)H-binding protein;protein_id=WJG80254.1;transl_table=11 CP118116.1 Genbank gene 3296643 3297161 . + . ID=gene-PUW38_16085;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=PUW38_16085 CP118116.1 Protein Homology CDS 3296643 3297161 . + 0 ID=cds-WJG80255.1;Parent=gene-PUW38_16085;Dbxref=NCBI_GP:WJG80255.1;Name=WJG80255.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=PUW38_16085;product=protein/nucleic acid deglycase;protein_id=WJG80255.1;transl_table=11 CP118116.1 Genbank gene 3297141 3297584 . - . ID=gene-PUW38_16090;Name=PUW38_16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16090 CP118116.1 Protein Homology CDS 3297141 3297584 . - 0 ID=cds-WJG80256.1;Parent=gene-PUW38_16090;Dbxref=NCBI_GP:WJG80256.1;Name=WJG80256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=PUW38_16090;product=YhbP family protein;protein_id=WJG80256.1;transl_table=11 CP118116.1 Genbank gene 3297622 3297939 . + . ID=gene-PUW38_16095;Name=PUW38_16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16095 CP118116.1 Protein Homology CDS 3297622 3297939 . + 0 ID=cds-WJG80257.1;Parent=gene-PUW38_16095;Dbxref=NCBI_GP:WJG80257.1;Name=WJG80257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=PUW38_16095;product=GIY-YIG nuclease family protein;protein_id=WJG80257.1;transl_table=11 CP118116.1 Genbank gene 3297926 3298429 . - . ID=gene-PUW38_16100;Name=PUW38_16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16100 CP118116.1 Protein Homology CDS 3297926 3298429 . - 0 ID=cds-WJG80258.1;Parent=gene-PUW38_16100;Dbxref=NCBI_GP:WJG80258.1;Name=WJG80258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=PUW38_16100;product=N-acetyltransferase;protein_id=WJG80258.1;transl_table=11 CP118116.1 Genbank gene 3298423 3298947 . - . ID=gene-PUW38_16105;Name=PUW38_16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16105 CP118116.1 Protein Homology CDS 3298423 3298947 . - 0 ID=cds-WJG80259.1;Parent=gene-PUW38_16105;Dbxref=NCBI_GP:WJG80259.1;Name=WJG80259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=PUW38_16105;product=SCP2 domain-containing protein;protein_id=WJG80259.1;transl_table=11 CP118116.1 Genbank gene 3299164 3300159 . + . ID=gene-PUW38_16110;Name=PUW38_16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16110 CP118116.1 Protein Homology CDS 3299164 3300159 . + 0 ID=cds-WJG80260.1;Parent=gene-PUW38_16110;Dbxref=NCBI_GP:WJG80260.1;Name=WJG80260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=PUW38_16110;product=U32 family peptidase;protein_id=WJG80260.1;transl_table=11 CP118116.1 Genbank gene 3300150 3301046 . + . ID=gene-PUW38_16115;Name=PUW38_16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16115 CP118116.1 Protein Homology CDS 3300150 3301046 . + 0 ID=cds-WJG80261.1;Parent=gene-PUW38_16115;Dbxref=NCBI_GP:WJG80261.1;Name=WJG80261.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462188.3;locus_tag=PUW38_16115;product=U32 family peptidase;protein_id=WJG80261.1;transl_table=11 CP118116.1 Genbank gene 3301224 3302231 . + . ID=gene-PUW38_16120;Name=PUW38_16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16120 CP118116.1 Protein Homology CDS 3301224 3302231 . + 0 ID=cds-WJG80262.1;Parent=gene-PUW38_16120;Dbxref=NCBI_GP:WJG80262.1;Name=WJG80262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=PUW38_16120;product=LLM class flavin-dependent oxidoreductase;protein_id=WJG80262.1;transl_table=11 CP118116.1 Genbank gene 3302209 3302928 . - . ID=gene-PUW38_16125;Name=PUW38_16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16125 CP118116.1 Protein Homology CDS 3302209 3302928 . - 0 ID=cds-WJG80263.1;Parent=gene-PUW38_16125;Dbxref=NCBI_GP:WJG80263.1;Name=WJG80263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=PUW38_16125;product=murein L%2CD-transpeptidase;protein_id=WJG80263.1;transl_table=11 CP118116.1 Genbank gene 3303087 3303617 . + . ID=gene-PUW38_16130;Name=PUW38_16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16130 CP118116.1 Protein Homology CDS 3303087 3303617 . + 0 ID=cds-WJG80264.1;Parent=gene-PUW38_16130;Dbxref=NCBI_GP:WJG80264.1;Name=WJG80264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=PUW38_16130;product=cytoplasmic protein;protein_id=WJG80264.1;transl_table=11 CP118116.1 Genbank gene 3303678 3304922 . - . ID=gene-PUW38_16135;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=PUW38_16135 CP118116.1 Protein Homology CDS 3303678 3304922 . - 0 ID=cds-WJG80265.1;Parent=gene-PUW38_16135;Dbxref=NCBI_GP:WJG80265.1;Name=WJG80265.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=PUW38_16135;product=tryptophan permease;protein_id=WJG80265.1;transl_table=11 CP118116.1 Genbank gene 3305076 3306932 . - . ID=gene-PUW38_16140;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=PUW38_16140 CP118116.1 Protein Homology CDS 3305076 3306932 . - 0 ID=cds-WJG80266.1;Parent=gene-PUW38_16140;Dbxref=NCBI_GP:WJG80266.1;Name=WJG80266.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=PUW38_16140;product=ATP-dependent RNA helicase DeaD;protein_id=WJG80266.1;transl_table=11 CP118116.1 Genbank gene 3306925 3307005 . - . ID=gene-PUW38_16145;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=PUW38_16145 CP118116.1 Protein Homology CDS 3306925 3307005 . - 0 ID=cds-WJG83265.1;Parent=gene-PUW38_16145;Dbxref=NCBI_GP:WJG83265.1;Name=WJG83265.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=PUW38_16145;product=protein YrbN;protein_id=WJG83265.1;transl_table=11 CP118116.1 Genbank gene 3307111 3307995 . - . ID=gene-PUW38_16150;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=PUW38_16150 CP118116.1 Protein Homology CDS 3307111 3307995 . - 0 ID=cds-WJG80267.1;Parent=gene-PUW38_16150;Dbxref=NCBI_GP:WJG80267.1;Name=WJG80267.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=PUW38_16150;product=lipoprotein NlpI;protein_id=WJG80267.1;transl_table=11 CP118116.1 Genbank gene 3308105 3310240 . - . ID=gene-PUW38_16155;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=PUW38_16155 CP118116.1 Protein Homology CDS 3308105 3310240 . - 0 ID=cds-WJG83266.1;Parent=gene-PUW38_16155;Dbxref=NCBI_GP:WJG83266.1;Name=WJG83266.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=PUW38_16155;product=polyribonucleotide nucleotidyltransferase;protein_id=WJG83266.1;transl_table=11 CP118116.1 Genbank gene 3310482 3310751 . - . ID=gene-PUW38_16160;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=PUW38_16160 CP118116.1 Protein Homology CDS 3310482 3310751 . - 0 ID=cds-WJG80268.1;Parent=gene-PUW38_16160;Dbxref=NCBI_GP:WJG80268.1;Name=WJG80268.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=PUW38_16160;product=30S ribosomal protein S15;protein_id=WJG80268.1;transl_table=11 CP118116.1 Genbank gene 3310902 3311846 . - . ID=gene-PUW38_16165;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=PUW38_16165 CP118116.1 Protein Homology CDS 3310902 3311846 . - 0 ID=cds-WJG80269.1;Parent=gene-PUW38_16165;Dbxref=NCBI_GP:WJG80269.1;Name=WJG80269.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=PUW38_16165;product=tRNA pseudouridine(55) synthase TruB;protein_id=WJG80269.1;transl_table=11 CP118116.1 Genbank gene 3311846 3312247 . - . ID=gene-PUW38_16170;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=PUW38_16170 CP118116.1 Protein Homology CDS 3311846 3312247 . - 0 ID=cds-WJG80270.1;Parent=gene-PUW38_16170;Dbxref=NCBI_GP:WJG80270.1;Name=WJG80270.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=PUW38_16170;product=30S ribosome-binding factor RbfA;protein_id=WJG80270.1;transl_table=11 CP118116.1 Genbank gene 3312468 3315146 . - . ID=gene-PUW38_16175;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=PUW38_16175 CP118116.1 Protein Homology CDS 3312468 3315146 . - 0 ID=cds-WJG80271.1;Parent=gene-PUW38_16175;Dbxref=NCBI_GP:WJG80271.1;Name=WJG80271.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=PUW38_16175;product=translation initiation factor IF-2;protein_id=WJG80271.1;transl_table=11 CP118116.1 Genbank pseudogene 3315171 3316671 . - . ID=gene-PUW38_16180;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=PUW38_16180;pseudo=true CP118116.1 Protein Homology CDS 3315171 3316671 . - 0 ID=cds-PUW38_16180;Parent=gene-PUW38_16180;Note=frameshifted;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=PUW38_16180;product=transcription termination factor NusA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3316699 3317151 . - . ID=gene-PUW38_16185;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=PUW38_16185 CP118116.1 Protein Homology CDS 3316699 3317151 . - 0 ID=cds-WJG80272.1;Parent=gene-PUW38_16185;Dbxref=NCBI_GP:WJG80272.1;Name=WJG80272.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=PUW38_16185;product=ribosome maturation factor RimP;protein_id=WJG80272.1;transl_table=11 CP118116.1 Genbank gene 3317359 3317435 . - . ID=gene-PUW38_16190;Name=PUW38_16190;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_16190 CP118116.1 tRNAscan-SE tRNA 3317359 3317435 . - . ID=rna-PUW38_16190;Parent=gene-PUW38_16190;anticodon=(pos:complement(3317399..3317401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16190;product=tRNA-Met CP118116.1 tRNAscan-SE exon 3317359 3317435 . - . ID=exon-PUW38_16190-1;Parent=rna-PUW38_16190;anticodon=(pos:complement(3317399..3317401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16190;product=tRNA-Met CP118116.1 Genbank gene 3317779 3319122 . + . ID=gene-PUW38_16195;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=PUW38_16195 CP118116.1 Protein Homology CDS 3317779 3319122 . + 0 ID=cds-WJG80273.1;Parent=gene-PUW38_16195;Dbxref=NCBI_GP:WJG80273.1;Name=WJG80273.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=PUW38_16195;product=argininosuccinate synthase;protein_id=WJG80273.1;transl_table=11 CP118116.1 Genbank gene 3319280 3319732 . + . ID=gene-PUW38_16200;Name=PUW38_16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16200 CP118116.1 GeneMarkS-2+ CDS 3319280 3319732 . + 0 ID=cds-WJG80274.1;Parent=gene-PUW38_16200;Dbxref=NCBI_GP:WJG80274.1;Name=WJG80274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_16200;product=hypothetical protein;protein_id=WJG80274.1;transl_table=11 CP118116.1 Genbank gene 3319689 3320240 . + . ID=gene-PUW38_16205;Name=PUW38_16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16205 CP118116.1 GeneMarkS-2+ CDS 3319689 3320240 . + 0 ID=cds-WJG80275.1;Parent=gene-PUW38_16205;Dbxref=NCBI_GP:WJG80275.1;Name=WJG80275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_16205;product=hypothetical protein;protein_id=WJG80275.1;transl_table=11 CP118116.1 Genbank gene 3320325 3320411 . - . ID=gene-PUW38_16210;Name=PUW38_16210;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_16210 CP118116.1 tRNAscan-SE tRNA 3320325 3320411 . - . ID=rna-PUW38_16210;Parent=gene-PUW38_16210;anticodon=(pos:complement(3320375..3320377));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16210;product=tRNA-Leu CP118116.1 tRNAscan-SE exon 3320325 3320411 . - . ID=exon-PUW38_16210-1;Parent=rna-PUW38_16210;anticodon=(pos:complement(3320375..3320377));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16210;product=tRNA-Leu CP118116.1 Genbank gene 3320425 3320757 . - . ID=gene-PUW38_16215;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=PUW38_16215 CP118116.1 Protein Homology CDS 3320425 3320757 . - 0 ID=cds-WJG83267.1;Parent=gene-PUW38_16215;Dbxref=NCBI_GP:WJG83267.1;Name=WJG83267.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=PUW38_16215;product=preprotein translocase subunit SecG;protein_id=WJG83267.1;transl_table=11 CP118116.1 Genbank pseudogene 3320980 3322316 . - . ID=gene-PUW38_16220;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=PUW38_16220;pseudo=true CP118116.1 Protein Homology CDS 3320980 3322316 . - 0 ID=cds-PUW38_16220;Parent=gene-PUW38_16220;Note=frameshifted;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=PUW38_16220;product=phosphoglucosamine mutase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3322309 3323157 . - . ID=gene-PUW38_16225;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=PUW38_16225 CP118116.1 Protein Homology CDS 3322309 3323157 . - 0 ID=cds-WJG80276.1;Parent=gene-PUW38_16225;Dbxref=NCBI_GP:WJG80276.1;Name=WJG80276.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=PUW38_16225;product=dihydropteroate synthase;protein_id=WJG80276.1;transl_table=11 CP118116.1 Genbank gene 3323262 3325196 . - . ID=gene-PUW38_16230;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=PUW38_16230 CP118116.1 Protein Homology CDS 3323262 3325196 . - 0 ID=cds-WJG80277.1;Parent=gene-PUW38_16230;Dbxref=NCBI_GP:WJG80277.1;Name=WJG80277.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=PUW38_16230;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WJG80277.1;transl_table=11 CP118116.1 Genbank gene 3325300 3325926 . - . ID=gene-PUW38_16235;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=PUW38_16235 CP118116.1 Protein Homology CDS 3325300 3325926 . - 0 ID=cds-WJG80278.1;Parent=gene-PUW38_16235;Dbxref=NCBI_GP:WJG80278.1;Name=WJG80278.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=PUW38_16235;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WJG80278.1;transl_table=11 CP118116.1 Genbank gene 3326053 3326346 . + . ID=gene-PUW38_16240;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=PUW38_16240 CP118116.1 Protein Homology CDS 3326053 3326346 . + 0 ID=cds-WJG83268.1;Parent=gene-PUW38_16240;Dbxref=NCBI_GP:WJG83268.1;Name=WJG83268.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=PUW38_16240;product=ribosome assembly RNA-binding protein YhbY;protein_id=WJG83268.1;transl_table=11 CP118116.1 Genbank gene 3326502 3326978 . - . ID=gene-PUW38_16245;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=PUW38_16245 CP118116.1 Protein Homology CDS 3326502 3326978 . - 0 ID=cds-WJG80279.1;Parent=gene-PUW38_16245;Dbxref=NCBI_GP:WJG80279.1;Name=WJG80279.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=PUW38_16245;product=transcription elongation factor GreA;protein_id=WJG80279.1;transl_table=11 CP118116.1 Genbank gene 3327226 3328659 . + . ID=gene-PUW38_16250;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=PUW38_16250 CP118116.1 Protein Homology CDS 3327226 3328659 . + 0 ID=cds-WJG80280.1;Parent=gene-PUW38_16250;Dbxref=NCBI_GP:WJG80280.1;Name=WJG80280.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=PUW38_16250;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WJG80280.1;transl_table=11 CP118116.1 Genbank gene 3328790 3329962 . - . ID=gene-PUW38_16255;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=PUW38_16255 CP118116.1 Protein Homology CDS 3328790 3329962 . - 0 ID=cds-WJG80281.1;Parent=gene-PUW38_16255;Dbxref=NCBI_GP:WJG80281.1;Name=WJG80281.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=PUW38_16255;product=Obg family GTPase CgtA;protein_id=WJG80281.1;transl_table=11 CP118116.1 Genbank gene 3329978 3330943 . - . ID=gene-PUW38_16260;Name=PUW38_16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16260 CP118116.1 Protein Homology CDS 3329978 3330943 . - 0 ID=cds-WJG80282.1;Parent=gene-PUW38_16260;Dbxref=NCBI_GP:WJG80282.1;Name=WJG80282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=PUW38_16260;product=DMT family transporter;protein_id=WJG80282.1;transl_table=11 CP118116.1 Genbank gene 3331073 3331330 . - . ID=gene-PUW38_16265;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=PUW38_16265 CP118116.1 Protein Homology CDS 3331073 3331330 . - 0 ID=cds-WJG80283.1;Parent=gene-PUW38_16265;Dbxref=NCBI_GP:WJG80283.1;Name=WJG80283.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=PUW38_16265;product=50S ribosomal protein L27;protein_id=WJG80283.1;transl_table=11 CP118116.1 Genbank gene 3331350 3331661 . - . ID=gene-PUW38_16270;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=PUW38_16270 CP118116.1 Protein Homology CDS 3331350 3331661 . - 0 ID=cds-WJG80284.1;Parent=gene-PUW38_16270;Dbxref=NCBI_GP:WJG80284.1;Name=WJG80284.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=PUW38_16270;product=50S ribosomal protein L21;protein_id=WJG80284.1;transl_table=11 CP118116.1 Genbank gene 3331919 3332890 . + . ID=gene-PUW38_16275;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=PUW38_16275 CP118116.1 Protein Homology CDS 3331919 3332890 . + 0 ID=cds-WJG80285.1;Parent=gene-PUW38_16275;Dbxref=NCBI_GP:WJG80285.1;Name=WJG80285.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=PUW38_16275;product=octaprenyl diphosphate synthase;protein_id=WJG80285.1;transl_table=11 CP118116.1 Genbank gene 3333122 3333409 . + . ID=gene-PUW38_16280;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=PUW38_16280 CP118116.1 Protein Homology CDS 3333122 3333409 . + 0 ID=cds-WJG80286.1;Parent=gene-PUW38_16280;Dbxref=NCBI_GP:WJG80286.1;Name=WJG80286.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=PUW38_16280;product=DNA-binding transcriptional regulator SfsB;protein_id=WJG80286.1;transl_table=11 CP118116.1 Genbank pseudogene 3333468 3334726 . - . ID=gene-PUW38_16285;Name=murA;gbkey=Gene;gene=murA;gene_biotype=pseudogene;locus_tag=PUW38_16285;pseudo=true CP118116.1 Protein Homology CDS 3333468 3334726 . - 0 ID=cds-PUW38_16285;Parent=gene-PUW38_16285;Note=frameshifted;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=PUW38_16285;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3334780 3335034 . - . ID=gene-PUW38_16290;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=PUW38_16290 CP118116.1 Protein Homology CDS 3334780 3335034 . - 0 ID=cds-WJG80287.1;Parent=gene-PUW38_16290;Dbxref=NCBI_GP:WJG80287.1;Name=WJG80287.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=PUW38_16290;product=BolA family iron metabolism protein IbaG;protein_id=WJG80287.1;transl_table=11 CP118116.1 Genbank gene 3335222 3335518 . - . ID=gene-PUW38_16295;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=PUW38_16295 CP118116.1 Protein Homology CDS 3335222 3335518 . - 0 ID=cds-WJG80288.1;Parent=gene-PUW38_16295;Dbxref=NCBI_GP:WJG80288.1;Name=WJG80288.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=PUW38_16295;product=lipid asymmetry maintenance protein MlaB;protein_id=WJG80288.1;transl_table=11 CP118116.1 Genbank gene 3335518 3336153 . - . ID=gene-PUW38_16300;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=PUW38_16300 CP118116.1 Protein Homology CDS 3335518 3336153 . - 0 ID=cds-WJG80289.1;Parent=gene-PUW38_16300;Dbxref=NCBI_GP:WJG80289.1;Name=WJG80289.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=PUW38_16300;product=phospholipid-binding protein MlaC;protein_id=WJG80289.1;transl_table=11 CP118116.1 Genbank gene 3336146 3336721 . - . ID=gene-PUW38_16305;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=PUW38_16305 CP118116.1 Protein Homology CDS 3336146 3336721 . - 0 ID=cds-WJG80290.1;Parent=gene-PUW38_16305;Dbxref=NCBI_GP:WJG80290.1;Name=WJG80290.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=PUW38_16305;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WJG80290.1;transl_table=11 CP118116.1 Genbank gene 3336726 3337508 . - . ID=gene-PUW38_16310;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=PUW38_16310 CP118116.1 Protein Homology CDS 3336726 3337508 . - 0 ID=cds-WJG80291.1;Parent=gene-PUW38_16310;Dbxref=NCBI_GP:WJG80291.1;Name=WJG80291.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=PUW38_16310;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WJG80291.1;transl_table=11 CP118116.1 Genbank gene 3337516 3338328 . - . ID=gene-PUW38_16315;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=PUW38_16315 CP118116.1 Protein Homology CDS 3337516 3338328 . - 0 ID=cds-WJG80292.1;Parent=gene-PUW38_16315;Dbxref=NCBI_GP:WJG80292.1;Name=WJG80292.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=PUW38_16315;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WJG80292.1;transl_table=11 CP118116.1 Genbank gene 3338541 3339518 . + . ID=gene-PUW38_16320;Name=PUW38_16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16320 CP118116.1 Protein Homology CDS 3338541 3339518 . + 0 ID=cds-WJG80293.1;Parent=gene-PUW38_16320;Dbxref=NCBI_GP:WJG80293.1;Name=WJG80293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=PUW38_16320;product=calcium/sodium antiporter;protein_id=WJG80293.1;transl_table=11 CP118116.1 Genbank gene 3339532 3340518 . + . ID=gene-PUW38_16325;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=PUW38_16325 CP118116.1 Protein Homology CDS 3339532 3340518 . + 0 ID=cds-WJG80294.1;Parent=gene-PUW38_16325;Dbxref=NCBI_GP:WJG80294.1;Name=WJG80294.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=PUW38_16325;product=arabinose-5-phosphate isomerase KdsD;protein_id=WJG80294.1;transl_table=11 CP118116.1 Genbank gene 3340539 3341105 . + . ID=gene-PUW38_16330;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=PUW38_16330 CP118116.1 Protein Homology CDS 3340539 3341105 . + 0 ID=cds-WJG80295.1;Parent=gene-PUW38_16330;Dbxref=NCBI_GP:WJG80295.1;Name=WJG80295.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=PUW38_16330;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WJG80295.1;transl_table=11 CP118116.1 Genbank gene 3341102 3341677 . + . ID=gene-PUW38_16335;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=PUW38_16335 CP118116.1 Protein Homology CDS 3341102 3341677 . + 0 ID=cds-WJG80296.1;Parent=gene-PUW38_16335;Dbxref=NCBI_GP:WJG80296.1;Name=WJG80296.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=PUW38_16335;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WJG80296.1;transl_table=11 CP118116.1 Genbank gene 3341646 3342200 . + . ID=gene-PUW38_16340;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=PUW38_16340 CP118116.1 Protein Homology CDS 3341646 3342200 . + 0 ID=cds-WJG80297.1;Parent=gene-PUW38_16340;Dbxref=NCBI_GP:WJG80297.1;Name=WJG80297.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=PUW38_16340;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WJG80297.1;transl_table=11 CP118116.1 Genbank gene 3342207 3342932 . + . ID=gene-PUW38_16345;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=PUW38_16345 CP118116.1 Protein Homology CDS 3342207 3342932 . + 0 ID=cds-WJG80298.1;Parent=gene-PUW38_16345;Dbxref=NCBI_GP:WJG80298.1;Name=WJG80298.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=PUW38_16345;product=LPS export ABC transporter ATP-binding protein;protein_id=WJG80298.1;transl_table=11 CP118116.1 Genbank gene 3342980 3344413 . + . ID=gene-PUW38_16350;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=PUW38_16350 CP118116.1 Protein Homology CDS 3342980 3344413 . + 0 ID=cds-WJG80299.1;Parent=gene-PUW38_16350;Dbxref=NCBI_GP:WJG80299.1;Name=WJG80299.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=PUW38_16350;product=RNA polymerase factor sigma-54;protein_id=WJG80299.1;transl_table=11 CP118116.1 Genbank gene 3344436 3344723 . + . ID=gene-PUW38_16355;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=PUW38_16355 CP118116.1 Protein Homology CDS 3344436 3344723 . + 0 ID=cds-WJG80300.1;Parent=gene-PUW38_16355;Dbxref=NCBI_GP:WJG80300.1;Name=WJG80300.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=PUW38_16355;product=ribosome hibernation promoting factor;protein_id=WJG80300.1;transl_table=11 CP118116.1 Genbank gene 3344841 3345332 . + . ID=gene-PUW38_16360;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=PUW38_16360 CP118116.1 Protein Homology CDS 3344841 3345332 . + 0 ID=cds-WJG80301.1;Parent=gene-PUW38_16360;Dbxref=NCBI_GP:WJG80301.1;Name=WJG80301.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=PUW38_16360;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WJG80301.1;transl_table=11 CP118116.1 Genbank gene 3345378 3346232 . + . ID=gene-PUW38_16365;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=PUW38_16365 CP118116.1 Protein Homology CDS 3345378 3346232 . + 0 ID=cds-WJG80302.1;Parent=gene-PUW38_16365;Dbxref=NCBI_GP:WJG80302.1;Name=WJG80302.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=PUW38_16365;product=RNase adapter RapZ;protein_id=WJG80302.1;transl_table=11 CP118116.1 Genbank gene 3346229 3346501 . + . ID=gene-PUW38_16370;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=PUW38_16370 CP118116.1 Protein Homology CDS 3346229 3346501 . + 0 ID=cds-WJG80303.1;Parent=gene-PUW38_16370;Dbxref=NCBI_GP:WJG80303.1;Name=WJG80303.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=PUW38_16370;product=PTS phosphocarrier protein NPr;protein_id=WJG80303.1;transl_table=11 CP118116.1 Genbank gene 3346751 3347383 . + . ID=gene-PUW38_16375;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=PUW38_16375 CP118116.1 Protein Homology CDS 3346751 3347383 . + 0 ID=cds-WJG80304.1;Parent=gene-PUW38_16375;Dbxref=NCBI_GP:WJG80304.1;Name=WJG80304.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=PUW38_16375;product=PhoP regulatory network protein YrbL;protein_id=WJG80304.1;transl_table=11 CP118116.1 Genbank gene 3347458 3348186 . - . ID=gene-PUW38_16380;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=PUW38_16380 CP118116.1 Protein Homology CDS 3347458 3348186 . - 0 ID=cds-WJG80305.1;Parent=gene-PUW38_16380;Dbxref=NCBI_GP:WJG80305.1;Name=WJG80305.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=PUW38_16380;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WJG80305.1;transl_table=11 CP118116.1 Genbank gene 3348183 3348836 . - . ID=gene-PUW38_16385;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=PUW38_16385 CP118116.1 Protein Homology CDS 3348183 3348836 . - 0 ID=cds-WJG80306.1;Parent=gene-PUW38_16385;Dbxref=NCBI_GP:WJG80306.1;Name=WJG80306.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=PUW38_16385;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WJG80306.1;transl_table=11 CP118116.1 Genbank pseudogene 3349063 3351398 . - . ID=gene-PUW38_16390;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=pseudogene;locus_tag=PUW38_16390;pseudo=true CP118116.1 Protein Homology CDS 3349063 3351398 . - 0 ID=cds-PUW38_16390;Parent=gene-PUW38_16390;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=PUW38_16390;product=aerobic respiration two-component sensor histidine kinase ArcB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3351492 3352421 . - . ID=gene-PUW38_16395;Name=PUW38_16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16395 CP118116.1 Protein Homology CDS 3351492 3352421 . - 0 ID=cds-WJG80307.1;Parent=gene-PUW38_16395;Dbxref=NCBI_GP:WJG80307.1;Name=WJG80307.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=PUW38_16395;product=TIGR01212 family radical SAM protein;protein_id=WJG80307.1;transl_table=11 CP118116.1 Genbank gene 3353093 3357553 . + . ID=gene-PUW38_16400;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=PUW38_16400 CP118116.1 Protein Homology CDS 3353093 3357553 . + 0 ID=cds-WJG80308.1;Parent=gene-PUW38_16400;Dbxref=NCBI_GP:WJG80308.1;Name=WJG80308.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=PUW38_16400;product=glutamate synthase large subunit;protein_id=WJG80308.1;transl_table=11 CP118116.1 Genbank gene 3357563 3358981 . + . ID=gene-PUW38_16405;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=PUW38_16405 CP118116.1 Protein Homology CDS 3357563 3358981 . + 0 ID=cds-WJG80309.1;Parent=gene-PUW38_16405;Dbxref=NCBI_GP:WJG80309.1;Name=WJG80309.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=PUW38_16405;product=glutamate synthase subunit GltD;protein_id=WJG80309.1;transl_table=11 CP118116.1 Genbank gene 3359188 3360291 . + . ID=gene-PUW38_16410;Name=PUW38_16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16410 CP118116.1 Protein Homology CDS 3359188 3360291 . + 0 ID=cds-WJG80310.1;Parent=gene-PUW38_16410;Dbxref=NCBI_GP:WJG80310.1;Name=WJG80310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=PUW38_16410;product=PDDEXK nuclease domain-containing protein;protein_id=WJG80310.1;transl_table=11 CP118116.1 Genbank gene 3360407 3361660 . + . ID=gene-PUW38_16415;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=PUW38_16415 CP118116.1 Protein Homology CDS 3360407 3361660 . + 0 ID=cds-WJG80311.1;Parent=gene-PUW38_16415;Dbxref=NCBI_GP:WJG80311.1;Name=WJG80311.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=PUW38_16415;product=cytosine permease;protein_id=WJG80311.1;transl_table=11 CP118116.1 Genbank gene 3361647 3362927 . + . ID=gene-PUW38_16420;Name=PUW38_16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16420 CP118116.1 Protein Homology CDS 3361647 3362927 . + 0 ID=cds-WJG80312.1;Parent=gene-PUW38_16420;Dbxref=NCBI_GP:WJG80312.1;Name=WJG80312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=PUW38_16420;product=cytosine deaminase;protein_id=WJG80312.1;transl_table=11 CP118116.1 Genbank gene 3363009 3363476 . - . ID=gene-PUW38_16425;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=PUW38_16425 CP118116.1 Protein Homology CDS 3363009 3363476 . - 0 ID=cds-WJG80313.1;Parent=gene-PUW38_16425;Dbxref=NCBI_GP:WJG80313.1;Name=WJG80313.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=cellular response to DNA damage stimulus|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=PUW38_16425;product=N-acetylneuraminate anomerase;protein_id=WJG80313.1;transl_table=11 CP118116.1 Genbank gene 3363473 3364348 . - . ID=gene-PUW38_16430;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=PUW38_16430 CP118116.1 Protein Homology CDS 3363473 3364348 . - 0 ID=cds-WJG80314.1;Parent=gene-PUW38_16430;Dbxref=NCBI_GP:WJG80314.1;Name=WJG80314.1;gbkey=CDS;gene=nanK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=PUW38_16430;product=N-acetylmannosamine kinase;protein_id=WJG80314.1;transl_table=11 CP118116.1 Genbank gene 3364345 3365034 . - . ID=gene-PUW38_16435;Name=PUW38_16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16435 CP118116.1 Protein Homology CDS 3364345 3365034 . - 0 ID=cds-WJG80315.1;Parent=gene-PUW38_16435;Dbxref=NCBI_GP:WJG80315.1;Name=WJG80315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=PUW38_16435;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WJG80315.1;transl_table=11 CP118116.1 Genbank gene 3365081 3366571 . - . ID=gene-PUW38_16440;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=PUW38_16440 CP118116.1 Protein Homology CDS 3365081 3366571 . - 0 ID=cds-WJG80316.1;Parent=gene-PUW38_16440;Dbxref=NCBI_GP:WJG80316.1;Name=WJG80316.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=PUW38_16440;product=sialic acid transporter NanT;protein_id=WJG80316.1;transl_table=11 CP118116.1 Genbank gene 3366687 3367580 . - . ID=gene-PUW38_16445;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=PUW38_16445 CP118116.1 Protein Homology CDS 3366687 3367580 . - 0 ID=cds-WJG80317.1;Parent=gene-PUW38_16445;Dbxref=NCBI_GP:WJG80317.1;Name=WJG80317.1;Ontology_term=GO:0006040,GO:0009273,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=PUW38_16445;product=N-acetylneuraminate lyase;protein_id=WJG80317.1;transl_table=11 CP118116.1 Genbank gene 3367715 3368506 . - . ID=gene-PUW38_16450;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=PUW38_16450 CP118116.1 Protein Homology CDS 3367715 3368506 . - 0 ID=cds-WJG80318.1;Parent=gene-PUW38_16450;Dbxref=NCBI_GP:WJG80318.1;Name=WJG80318.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=PUW38_16450;product=transcriptional regulator NanR;protein_id=WJG80318.1;transl_table=11 CP118116.1 Genbank gene 3368615 3369115 . - . ID=gene-PUW38_16455;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=PUW38_16455 CP118116.1 Protein Homology CDS 3368615 3369115 . - 0 ID=cds-WJG80319.1;Parent=gene-PUW38_16455;Dbxref=NCBI_GP:WJG80319.1;Name=WJG80319.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=PUW38_16455;product=ClpXP protease specificity-enhancing factor;protein_id=WJG80319.1;transl_table=11 CP118116.1 Genbank gene 3369121 3369759 . - . ID=gene-PUW38_16460;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=PUW38_16460 CP118116.1 Protein Homology CDS 3369121 3369759 . - 0 ID=cds-WJG80320.1;Parent=gene-PUW38_16460;Dbxref=NCBI_GP:WJG80320.1;Name=WJG80320.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=PUW38_16460;product=stringent starvation protein SspA;protein_id=WJG80320.1;transl_table=11 CP118116.1 Genbank gene 3370021 3370773 . - . ID=gene-PUW38_16465;Name=PUW38_16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16465 CP118116.1 Protein Homology CDS 3370021 3370773 . - 0 ID=cds-WJG83269.1;Parent=gene-PUW38_16465;Dbxref=NCBI_GP:WJG83269.1;Name=WJG83269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=PUW38_16465;product=DUF695 domain-containing protein;protein_id=WJG83269.1;transl_table=11 CP118116.1 Genbank gene 3370973 3371365 . - . ID=gene-PUW38_16470;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=PUW38_16470 CP118116.1 Protein Homology CDS 3370973 3371365 . - 0 ID=cds-WJG80321.1;Parent=gene-PUW38_16470;Dbxref=NCBI_GP:WJG80321.1;Name=WJG80321.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=PUW38_16470;product=30S ribosomal protein S9;protein_id=WJG80321.1;transl_table=11 CP118116.1 Genbank gene 3371381 3371809 . - . ID=gene-PUW38_16475;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=PUW38_16475 CP118116.1 Protein Homology CDS 3371381 3371809 . - 0 ID=cds-WJG80322.1;Parent=gene-PUW38_16475;Dbxref=NCBI_GP:WJG80322.1;Name=WJG80322.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=PUW38_16475;product=50S ribosomal protein L13;protein_id=WJG80322.1;transl_table=11 CP118116.1 Genbank gene 3372111 3373235 . - . ID=gene-PUW38_16480;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=PUW38_16480 CP118116.1 Protein Homology CDS 3372111 3373235 . - 0 ID=cds-WJG80323.1;Parent=gene-PUW38_16480;Dbxref=NCBI_GP:WJG80323.1;Name=WJG80323.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=PUW38_16480;product=cell division protein ZapE;protein_id=WJG80323.1;transl_table=11 CP118116.1 Genbank gene 3373428 3373826 . + . ID=gene-PUW38_16485;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=PUW38_16485 CP118116.1 Protein Homology CDS 3373428 3373826 . + 0 ID=cds-WJG80324.1;Parent=gene-PUW38_16485;Dbxref=NCBI_GP:WJG80324.1;Name=WJG80324.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=PUW38_16485;product=Z-ring associated protein ZapG;protein_id=WJG80324.1;transl_table=11 CP118116.1 Genbank gene 3373983 3375350 . + . ID=gene-PUW38_16490;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=PUW38_16490 CP118116.1 Protein Homology CDS 3373983 3375350 . + 0 ID=cds-WJG80325.1;Parent=gene-PUW38_16490;Dbxref=NCBI_GP:WJG80325.1;Name=WJG80325.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=PUW38_16490;product=serine endoprotease DegQ;protein_id=WJG80325.1;transl_table=11 CP118116.1 Genbank gene 3375443 3376513 . + . ID=gene-PUW38_16495;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=PUW38_16495 CP118116.1 Protein Homology CDS 3375443 3376513 . + 0 ID=cds-WJG80326.1;Parent=gene-PUW38_16495;Dbxref=NCBI_GP:WJG80326.1;Name=WJG80326.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=PUW38_16495;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WJG80326.1;transl_table=11 CP118116.1 Genbank gene 3376547 3377278 . - . ID=gene-PUW38_16500;Name=PUW38_16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16500 CP118116.1 Protein Homology CDS 3376547 3377278 . - 0 ID=cds-WJG80327.1;Parent=gene-PUW38_16500;Dbxref=NCBI_GP:WJG80327.1;Name=WJG80327.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=PUW38_16500;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WJG80327.1;transl_table=11 CP118116.1 Genbank pseudogene 3377298 3378598 . - . ID=gene-PUW38_16505;Name=PUW38_16505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_16505;pseudo=true CP118116.1 Protein Homology CDS 3377298 3378598 . - 0 ID=cds-PUW38_16505;Parent=gene-PUW38_16505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW38_16505;product=oxalacetate decarboxylase subunit beta;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3378611 3380383 . - . ID=gene-PUW38_16510;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW38_16510 CP118116.1 Protein Homology CDS 3378611 3380383 . - 0 ID=cds-WJG80328.1;Parent=gene-PUW38_16510;Dbxref=NCBI_GP:WJG80328.1;Name=WJG80328.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW38_16510;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJG80328.1;transl_table=11 CP118116.1 Genbank gene 3380399 3380641 . - . ID=gene-PUW38_16515;Name=PUW38_16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16515 CP118116.1 Protein Homology CDS 3380399 3380641 . - 0 ID=cds-WJG80329.1;Parent=gene-PUW38_16515;Dbxref=NCBI_GP:WJG80329.1;Name=WJG80329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=PUW38_16515;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJG80329.1;transl_table=11 CP118116.1 Genbank gene 3380798 3381415 . - . ID=gene-PUW38_16520;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=PUW38_16520 CP118116.1 Protein Homology CDS 3380798 3381415 . - 0 ID=cds-WJG80330.1;Parent=gene-PUW38_16520;Dbxref=NCBI_GP:WJG80330.1;Name=WJG80330.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=PUW38_16520;product=L(+)-tartrate dehydratase subunit beta;protein_id=WJG80330.1;transl_table=11 CP118116.1 Genbank gene 3381415 3382314 . - . ID=gene-PUW38_16525;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=PUW38_16525 CP118116.1 Protein Homology CDS 3381415 3382314 . - 0 ID=cds-WJG80331.1;Parent=gene-PUW38_16525;Dbxref=NCBI_GP:WJG80331.1;Name=WJG80331.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=PUW38_16525;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WJG80331.1;transl_table=11 CP118116.1 Genbank gene 3382347 3383615 . - . ID=gene-PUW38_16530;Name=PUW38_16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16530 CP118116.1 Protein Homology CDS 3382347 3383615 . - 0 ID=cds-WJG80332.1;Parent=gene-PUW38_16530;Dbxref=NCBI_GP:WJG80332.1;Name=WJG80332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=PUW38_16530;product=SLC13 family permease;protein_id=WJG80332.1;transl_table=11 CP118116.1 Genbank gene 3383826 3384491 . - . ID=gene-PUW38_16535;Name=PUW38_16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16535 CP118116.1 Protein Homology CDS 3383826 3384491 . - 0 ID=cds-WJG80333.1;Parent=gene-PUW38_16535;Dbxref=NCBI_GP:WJG80333.1;Name=WJG80333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=PUW38_16535;product=GntR family transcriptional regulator;protein_id=WJG80333.1;transl_table=11 CP118116.1 Genbank gene 3384478 3385107 . - . ID=gene-PUW38_16540;Name=PUW38_16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16540 CP118116.1 Protein Homology CDS 3384478 3385107 . - 0 ID=cds-WJG80334.1;Parent=gene-PUW38_16540;Dbxref=NCBI_GP:WJG80334.1;Name=WJG80334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=PUW38_16540;product=GntR family transcriptional regulator;protein_id=WJG80334.1;transl_table=11 CP118116.1 Genbank gene 3385227 3386165 . - . ID=gene-PUW38_16545;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=PUW38_16545 CP118116.1 Protein Homology CDS 3385227 3386165 . - 0 ID=cds-WJG80335.1;Parent=gene-PUW38_16545;Dbxref=NCBI_GP:WJG80335.1;Name=WJG80335.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=PUW38_16545;product=malate dehydrogenase;protein_id=WJG80335.1;transl_table=11 CP118116.1 Genbank gene 3386580 3387050 . + . ID=gene-PUW38_16550;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=PUW38_16550 CP118116.1 Protein Homology CDS 3386580 3387050 . + 0 ID=cds-WJG80336.1;Parent=gene-PUW38_16550;Dbxref=NCBI_GP:WJG80336.1;Name=WJG80336.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=PUW38_16550;product=transcriptional regulator ArgR;protein_id=WJG80336.1;transl_table=11 CP118116.1 Genbank gene 3387414 3387677 . + . ID=gene-PUW38_16555;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=PUW38_16555 CP118116.1 Protein Homology CDS 3387414 3387677 . + 0 ID=cds-WJG80337.1;Parent=gene-PUW38_16555;Dbxref=NCBI_GP:WJG80337.1;Name=WJG80337.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=PUW38_16555;product=peroxide/acid stress response protein YhcN;protein_id=WJG80337.1;transl_table=11 CP118116.1 Genbank gene 3387781 3388047 . + . ID=gene-PUW38_16560;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=PUW38_16560 CP118116.1 Protein Homology CDS 3387781 3388047 . + 0 ID=cds-WJG80338.1;Parent=gene-PUW38_16560;Dbxref=NCBI_GP:WJG80338.1;Name=WJG80338.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=PUW38_16560;product=DUF1471 family stress response protein YhcN-B;protein_id=WJG80338.1;transl_table=11 CP118116.1 Genbank gene 3388107 3388379 . - . ID=gene-PUW38_16565;Name=PUW38_16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16565 CP118116.1 Protein Homology CDS 3388107 3388379 . - 0 ID=cds-WJG80339.1;Parent=gene-PUW38_16565;Dbxref=NCBI_GP:WJG80339.1;Name=WJG80339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=PUW38_16565;product=hypothetical protein;protein_id=WJG80339.1;transl_table=11 CP118116.1 Genbank gene 3388551 3390518 . - . ID=gene-PUW38_16570;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=PUW38_16570 CP118116.1 Protein Homology CDS 3388551 3390518 . - 0 ID=cds-WJG80340.1;Parent=gene-PUW38_16570;Dbxref=NCBI_GP:WJG80340.1;Name=WJG80340.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=PUW38_16570;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WJG80340.1;transl_table=11 CP118116.1 Genbank gene 3390524 3391456 . - . ID=gene-PUW38_16575;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=PUW38_16575 CP118116.1 Protein Homology CDS 3390524 3391456 . - 0 ID=cds-WJG80341.1;Parent=gene-PUW38_16575;Dbxref=NCBI_GP:WJG80341.1;Name=WJG80341.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=PUW38_16575;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WJG80341.1;transl_table=11 CP118116.1 Genbank gene 3391464 3391667 . - . ID=gene-PUW38_16580;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=PUW38_16580 CP118116.1 Protein Homology CDS 3391464 3391667 . - 0 ID=cds-WJG80342.1;Parent=gene-PUW38_16580;Dbxref=NCBI_GP:WJG80342.1;Name=WJG80342.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=PUW38_16580;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WJG80342.1;transl_table=11 CP118116.1 Genbank gene 3391849 3392778 . + . ID=gene-PUW38_16585;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=PUW38_16585 CP118116.1 Protein Homology CDS 3391849 3392778 . + 0 ID=cds-WJG80343.1;Parent=gene-PUW38_16585;Dbxref=NCBI_GP:WJG80343.1;Name=WJG80343.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=PUW38_16585;product=HTH-type transcriptional activator AaeR;protein_id=WJG80343.1;transl_table=11 CP118116.1 Genbank pseudogene 3392901 3394345 . - . ID=gene-PUW38_16590;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=pseudogene;locus_tag=PUW38_16590;pseudo=true CP118116.1 Protein Homology CDS 3392901 3394345 . - 0 ID=cds-PUW38_16590;Parent=gene-PUW38_16590;Note=frameshifted;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=PUW38_16590;product=metalloprotease TldD;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3394490 3398287 . - . ID=gene-PUW38_16595;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=pseudogene;locus_tag=PUW38_16595;pseudo=true CP118116.1 Protein Homology CDS 3394490 3398287 . - 0 ID=cds-PUW38_16595;Parent=gene-PUW38_16595;Note=frameshifted;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=PUW38_16595;product=AsmA2 domain-containing protein YhdP;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3398398 3399867 . - . ID=gene-PUW38_16600;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=PUW38_16600 CP118116.1 Protein Homology CDS 3398398 3399867 . - 0 ID=cds-WJG80344.1;Parent=gene-PUW38_16600;Dbxref=NCBI_GP:WJG80344.1;Name=WJG80344.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=PUW38_16600;product=ribonuclease G;protein_id=WJG80344.1;transl_table=11 CP118116.1 Genbank gene 3399857 3400450 . - . ID=gene-PUW38_16605;Name=PUW38_16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16605 CP118116.1 Protein Homology CDS 3399857 3400450 . - 0 ID=cds-WJG80345.1;Parent=gene-PUW38_16605;Dbxref=NCBI_GP:WJG80345.1;Name=WJG80345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=PUW38_16605;product=Maf family protein;protein_id=WJG80345.1;transl_table=11 CP118116.1 Genbank gene 3400459 3400947 . - . ID=gene-PUW38_16610;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=PUW38_16610 CP118116.1 Protein Homology CDS 3400459 3400947 . - 0 ID=cds-WJG83270.1;Parent=gene-PUW38_16610;Dbxref=NCBI_GP:WJG83270.1;Name=WJG83270.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=PUW38_16610;product=rod shape-determining protein MreD;protein_id=WJG83270.1;transl_table=11 CP118116.1 Genbank gene 3400950 3402002 . - . ID=gene-PUW38_16615;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=PUW38_16615 CP118116.1 Protein Homology CDS 3400950 3402002 . - 0 ID=cds-WJG80346.1;Parent=gene-PUW38_16615;Dbxref=NCBI_GP:WJG80346.1;Name=WJG80346.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=PUW38_16615;product=rod shape-determining protein MreC;protein_id=WJG80346.1;transl_table=11 CP118116.1 Genbank gene 3402067 3403110 . - . ID=gene-PUW38_16620;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=PUW38_16620 CP118116.1 Protein Homology CDS 3402067 3403110 . - 0 ID=cds-WJG80347.1;Parent=gene-PUW38_16620;Dbxref=NCBI_GP:WJG80347.1;Name=WJG80347.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=PUW38_16620;product=rod shape-determining protein MreB;protein_id=WJG80347.1;transl_table=11 CP118116.1 Genbank gene 3403418 3405358 . - . ID=gene-PUW38_16625;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=PUW38_16625 CP118116.1 Protein Homology CDS 3403418 3405358 . - 0 ID=cds-WJG80348.1;Parent=gene-PUW38_16625;Dbxref=NCBI_GP:WJG80348.1;Name=WJG80348.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=PUW38_16625;product=RNase E specificity factor CsrD;protein_id=WJG80348.1;transl_table=11 CP118116.1 Genbank gene 3405562 3406536 . + . ID=gene-PUW38_16630;Name=PUW38_16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16630 CP118116.1 Protein Homology CDS 3405562 3406536 . + 0 ID=cds-WJG80349.1;Parent=gene-PUW38_16630;Dbxref=NCBI_GP:WJG80349.1;Name=WJG80349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=PUW38_16630;product=oxidoreductase;protein_id=WJG80349.1;transl_table=11 CP118116.1 Genbank gene 3406649 3407653 . + . ID=gene-PUW38_16635;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=PUW38_16635 CP118116.1 Protein Homology CDS 3406649 3407653 . + 0 ID=cds-WJG80350.1;Parent=gene-PUW38_16635;Dbxref=NCBI_GP:WJG80350.1;Name=WJG80350.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=PUW38_16635;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WJG80350.1;transl_table=11 CP118116.1 Genbank gene 3407654 3408253 . + . ID=gene-PUW38_16640;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=PUW38_16640 CP118116.1 Protein Homology CDS 3407654 3408253 . + 0 ID=cds-WJG80351.1;Parent=gene-PUW38_16640;Dbxref=NCBI_GP:WJG80351.1;Name=WJG80351.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=PUW38_16640;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WJG80351.1;transl_table=11 CP118116.1 Genbank gene 3408646 3409116 . + . ID=gene-PUW38_16645;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=PUW38_16645 CP118116.1 Protein Homology CDS 3408646 3409116 . + 0 ID=cds-WJG80352.1;Parent=gene-PUW38_16645;Dbxref=NCBI_GP:WJG80352.1;Name=WJG80352.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=PUW38_16645;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WJG80352.1;transl_table=11 CP118116.1 Genbank gene 3409127 3410476 . + . ID=gene-PUW38_16650;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PUW38_16650 CP118116.1 Protein Homology CDS 3409127 3410476 . + 0 ID=cds-WJG80353.1;Parent=gene-PUW38_16650;Dbxref=NCBI_GP:WJG80353.1;Name=WJG80353.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=PUW38_16650;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WJG80353.1;transl_table=11 CP118116.1 Genbank gene 3410585 3410827 . + . ID=gene-PUW38_16655;Name=PUW38_16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16655 CP118116.1 Protein Homology CDS 3410585 3410827 . + 0 ID=cds-WJG80354.1;Parent=gene-PUW38_16655;Dbxref=NCBI_GP:WJG80354.1;Name=WJG80354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=PUW38_16655;product=YhdT family protein;protein_id=WJG80354.1;transl_table=11 CP118116.1 Genbank pseudogene 3410817 3412267 . + . ID=gene-PUW38_16660;Name=panF;gbkey=Gene;gene=panF;gene_biotype=pseudogene;locus_tag=PUW38_16660;pseudo=true CP118116.1 Protein Homology CDS 3410817 3412267 . + 0 ID=cds-PUW38_16660;Parent=gene-PUW38_16660;Note=frameshifted;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=PUW38_16660;product=sodium/pantothenate symporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3412279 3413160 . + . ID=gene-PUW38_16665;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=PUW38_16665 CP118116.1 Protein Homology CDS 3412279 3413160 . + 0 ID=cds-WJG80355.1;Parent=gene-PUW38_16665;Dbxref=NCBI_GP:WJG80355.1;Name=WJG80355.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=PUW38_16665;product=50S ribosomal protein L11 methyltransferase;protein_id=WJG80355.1;transl_table=11 CP118116.1 Genbank gene 3413821 3414786 . + . ID=gene-PUW38_16670;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=PUW38_16670 CP118116.1 Protein Homology CDS 3413821 3414786 . + 0 ID=cds-WJG80356.1;Parent=gene-PUW38_16670;Dbxref=NCBI_GP:WJG80356.1;Name=WJG80356.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=PUW38_16670;product=tRNA dihydrouridine synthase DusB;protein_id=WJG80356.1;transl_table=11 CP118116.1 Genbank gene 3414812 3415108 . + . ID=gene-PUW38_16675;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=PUW38_16675 CP118116.1 Protein Homology CDS 3414812 3415108 . + 0 ID=cds-WJG80357.1;Parent=gene-PUW38_16675;Dbxref=NCBI_GP:WJG80357.1;Name=WJG80357.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=PUW38_16675;product=DNA-binding transcriptional regulator Fis;protein_id=WJG80357.1;transl_table=11 CP118116.1 Genbank gene 3415194 3416078 . + . ID=gene-PUW38_16680;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=PUW38_16680 CP118116.1 Protein Homology CDS 3415194 3416078 . + 0 ID=cds-WJG80358.1;Parent=gene-PUW38_16680;Dbxref=NCBI_GP:WJG80358.1;Name=WJG80358.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=PUW38_16680;product=adenine-specific DNA-methyltransferase;protein_id=WJG80358.1;transl_table=11 CP118116.1 Genbank gene 3416161 3416325 . + . ID=gene-PUW38_16685;Name=PUW38_16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16685 CP118116.1 Protein Homology CDS 3416161 3416325 . + 0 ID=cds-WJG80359.1;Parent=gene-PUW38_16685;Dbxref=NCBI_GP:WJG80359.1;Name=WJG80359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=PUW38_16685;product=DUF2556 family protein;protein_id=WJG80359.1;transl_table=11 CP118116.1 Genbank gene 3416476 3418575 . + . ID=gene-PUW38_16690;Name=PUW38_16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16690 CP118116.1 Protein Homology CDS 3416476 3418575 . + 0 ID=cds-WJG80360.1;Parent=gene-PUW38_16690;Dbxref=NCBI_GP:WJG80360.1;Name=WJG80360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=PUW38_16690;product=EAL domain-containing protein;protein_id=WJG80360.1;transl_table=11 CP118116.1 Genbank gene 3418578 3419240 . - . ID=gene-PUW38_16695;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=PUW38_16695 CP118116.1 Protein Homology CDS 3418578 3419240 . - 0 ID=cds-WJG80361.1;Parent=gene-PUW38_16695;Dbxref=NCBI_GP:WJG80361.1;Name=WJG80361.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=PUW38_16695;product=acrEF/envCD operon transcriptional regulator;protein_id=WJG80361.1;transl_table=11 CP118116.1 Genbank gene 3419653 3420810 . + . ID=gene-PUW38_16700;Name=PUW38_16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16700 CP118116.1 Protein Homology CDS 3419653 3420810 . + 0 ID=cds-WJG80362.1;Parent=gene-PUW38_16700;Dbxref=NCBI_GP:WJG80362.1;Name=WJG80362.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=PUW38_16700;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WJG80362.1;transl_table=11 CP118116.1 Genbank pseudogene 3420822 3423934 . + . ID=gene-PUW38_16705;Name=PUW38_16705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_16705;pseudo=true CP118116.1 Protein Homology CDS 3420822 3423934 . + 0 ID=cds-PUW38_16705;Parent=gene-PUW38_16705;Note=frameshifted;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=PUW38_16705;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3424172 3424393 . + . ID=gene-PUW38_16710;Name=PUW38_16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16710 CP118116.1 Protein Homology CDS 3424172 3424393 . + 0 ID=cds-WJG80363.1;Parent=gene-PUW38_16710;Dbxref=NCBI_GP:WJG80363.1;Name=WJG80363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=PUW38_16710;product=hypothetical protein;protein_id=WJG80363.1;transl_table=11 CP118116.1 Genbank gene 3425177 3425292 . - . ID=gene-PUW38_16715;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW38_16715 CP118116.1 cmsearch rRNA 3425177 3425292 . - . ID=rna-PUW38_16715;Parent=gene-PUW38_16715;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_16715;product=5S ribosomal RNA CP118116.1 cmsearch exon 3425177 3425292 . - . ID=exon-PUW38_16715-1;Parent=rna-PUW38_16715;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_16715;product=5S ribosomal RNA CP118116.1 Genbank gene 3425332 3425407 . - . ID=gene-PUW38_16720;Name=PUW38_16720;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_16720 CP118116.1 tRNAscan-SE tRNA 3425332 3425407 . - . ID=rna-PUW38_16720;Parent=gene-PUW38_16720;anticodon=(pos:complement(3425372..3425374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16720;product=tRNA-Thr CP118116.1 tRNAscan-SE exon 3425332 3425407 . - . ID=exon-PUW38_16720-1;Parent=rna-PUW38_16720;anticodon=(pos:complement(3425372..3425374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16720;product=tRNA-Thr CP118116.1 Genbank gene 3425422 3425537 . - . ID=gene-PUW38_16725;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW38_16725 CP118116.1 cmsearch rRNA 3425422 3425537 . - . ID=rna-PUW38_16725;Parent=gene-PUW38_16725;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_16725;product=5S ribosomal RNA CP118116.1 cmsearch exon 3425422 3425537 . - . ID=exon-PUW38_16725-1;Parent=rna-PUW38_16725;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_16725;product=5S ribosomal RNA CP118116.1 Genbank gene 3425734 3428722 . - . ID=gene-PUW38_16730;Name=PUW38_16730;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_16730 CP118116.1 cmsearch rRNA 3425734 3428722 . - . ID=rna-PUW38_16730;Parent=gene-PUW38_16730;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_16730;product=23S ribosomal RNA CP118116.1 cmsearch exon 3425734 3428722 . - . ID=exon-PUW38_16730-1;Parent=rna-PUW38_16730;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_16730;product=23S ribosomal RNA CP118116.1 Genbank gene 3428905 3428980 . - . ID=gene-PUW38_16735;Name=PUW38_16735;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_16735 CP118116.1 tRNAscan-SE tRNA 3428905 3428980 . - . ID=rna-PUW38_16735;Parent=gene-PUW38_16735;anticodon=(pos:complement(3428945..3428947));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16735;product=tRNA-Ala CP118116.1 tRNAscan-SE exon 3428905 3428980 . - . ID=exon-PUW38_16735-1;Parent=rna-PUW38_16735;anticodon=(pos:complement(3428945..3428947));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16735;product=tRNA-Ala CP118116.1 Genbank gene 3429092 3429168 . - . ID=gene-PUW38_16740;Name=PUW38_16740;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_16740 CP118116.1 tRNAscan-SE tRNA 3429092 3429168 . - . ID=rna-PUW38_16740;Parent=gene-PUW38_16740;anticodon=(pos:complement(3429132..3429134));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16740;product=tRNA-Ile CP118116.1 tRNAscan-SE exon 3429092 3429168 . - . ID=exon-PUW38_16740-1;Parent=rna-PUW38_16740;anticodon=(pos:complement(3429132..3429134));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_16740;product=tRNA-Ile CP118116.1 Genbank gene 3429238 3430779 . - . ID=gene-PUW38_16745;Name=PUW38_16745;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_16745 CP118116.1 cmsearch rRNA 3429238 3430779 . - . ID=rna-PUW38_16745;Parent=gene-PUW38_16745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_16745;product=16S ribosomal RNA CP118116.1 cmsearch exon 3429238 3430779 . - . ID=exon-PUW38_16745-1;Parent=rna-PUW38_16745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_16745;product=16S ribosomal RNA CP118116.1 Genbank gene 3431162 3432013 . - . ID=gene-PUW38_16750;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=PUW38_16750 CP118116.1 Protein Homology CDS 3431162 3432013 . - 0 ID=cds-WJG80364.1;Parent=gene-PUW38_16750;Dbxref=NCBI_GP:WJG80364.1;Name=WJG80364.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=PUW38_16750;product=glutamate racemase;protein_id=WJG80364.1;transl_table=11 CP118116.1 Genbank pseudogene 3431958 3433802 . - . ID=gene-PUW38_16755;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=pseudogene;locus_tag=PUW38_16755;pseudo=true CP118116.1 Protein Homology CDS 3431958 3433802 . - 0 ID=cds-PUW38_16755;Parent=gene-PUW38_16755;Note=internal stop;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=PUW38_16755;product=TonB-dependent vitamin B12 receptor BtuB;pseudo=true;transl_table=11 CP118116.1 cmsearch riboswitch 3433868 3434061 . - . ID=id-CP118116.1:3433868..3434061;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118116.1 Genbank gene 3434176 3435276 . + . ID=gene-PUW38_16760;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=PUW38_16760 CP118116.1 Protein Homology CDS 3434176 3435276 . + 0 ID=cds-WJG80365.1;Parent=gene-PUW38_16760;Dbxref=NCBI_GP:WJG80365.1;Name=WJG80365.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=PUW38_16760;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WJG80365.1;transl_table=11 CP118116.1 Genbank pseudogene 3435326 3435682 . - . ID=gene-PUW38_16765;Name=PUW38_16765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_16765;pseudo=true CP118116.1 Protein Homology CDS 3435326 3435682 . - 0 ID=cds-PUW38_16765;Parent=gene-PUW38_16765;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=PUW38_16765;product=YijD family membrane protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3435698 3436333 . - . ID=gene-PUW38_16770;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=PUW38_16770 CP118116.1 Protein Homology CDS 3435698 3436333 . - 0 ID=cds-WJG80366.1;Parent=gene-PUW38_16770;Dbxref=NCBI_GP:WJG80366.1;Name=WJG80366.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=PUW38_16770;product=HTH-type transcriptional repressor FabR;protein_id=WJG80366.1;transl_table=11 CP118116.1 Genbank gene 3436532 3437932 . + . ID=gene-PUW38_16775;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=PUW38_16775 CP118116.1 Protein Homology CDS 3436532 3437932 . + 0 ID=cds-WJG80367.1;Parent=gene-PUW38_16775;Dbxref=NCBI_GP:WJG80367.1;Name=WJG80367.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=PUW38_16775;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WJG80367.1;transl_table=11 CP118116.1 Genbank gene 3437915 3438832 . - . ID=gene-PUW38_16780;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=PUW38_16780 CP118116.1 Protein Homology CDS 3437915 3438832 . - 0 ID=cds-WJG80368.1;Parent=gene-PUW38_16780;Dbxref=NCBI_GP:WJG80368.1;Name=WJG80368.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=PUW38_16780;product=DNA-binding transcriptional regulator OxyR;protein_id=WJG80368.1;transl_table=11 CP118116.1 Genbank gene 3439116 3440492 . - . ID=gene-PUW38_16785;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=PUW38_16785 CP118116.1 Protein Homology CDS 3439116 3440492 . - 0 ID=cds-WJG80369.1;Parent=gene-PUW38_16785;Dbxref=NCBI_GP:WJG80369.1;Name=WJG80369.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=PUW38_16785;product=argininosuccinate lyase;protein_id=WJG80369.1;transl_table=11 CP118116.1 Genbank gene 3440610 3441386 . - . ID=gene-PUW38_16790;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=PUW38_16790 CP118116.1 Protein Homology CDS 3440610 3441386 . - 0 ID=cds-WJG80370.1;Parent=gene-PUW38_16790;Dbxref=NCBI_GP:WJG80370.1;Name=WJG80370.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=PUW38_16790;product=acetylglutamate kinase;protein_id=WJG80370.1;transl_table=11 CP118116.1 Genbank pseudogene 3441394 3442397 . - . ID=gene-PUW38_16795;Name=argC;gbkey=Gene;gene=argC;gene_biotype=pseudogene;locus_tag=PUW38_16795;pseudo=true CP118116.1 Protein Homology CDS 3441394 3442397 . - 0 ID=cds-PUW38_16795;Parent=gene-PUW38_16795;Note=frameshifted;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=PUW38_16795;product=N-acetyl-gamma-glutamyl-phosphate reductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3442486 3443637 . + . ID=gene-PUW38_16800;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=PUW38_16800 CP118116.1 Protein Homology CDS 3442486 3443637 . + 0 ID=cds-WJG80371.1;Parent=gene-PUW38_16800;Dbxref=NCBI_GP:WJG80371.1;Name=WJG80371.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=PUW38_16800;product=acetylornithine deacetylase;protein_id=WJG80371.1;transl_table=11 CP118116.1 Genbank gene 3444006 3446657 . + . ID=gene-PUW38_16805;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=PUW38_16805 CP118116.1 Protein Homology CDS 3444006 3446657 . + 0 ID=cds-WJG80372.1;Parent=gene-PUW38_16805;Dbxref=NCBI_GP:WJG80372.1;Name=WJG80372.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=PUW38_16805;product=phosphoenolpyruvate carboxylase;protein_id=WJG80372.1;transl_table=11 CP118116.1 Genbank pseudogene 3446868 3448600 . + . ID=gene-PUW38_16810;Name=PUW38_16810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_16810;pseudo=true CP118116.1 Protein Homology CDS 3446868 3448600 . + 0 ID=cds-PUW38_16810;Parent=gene-PUW38_16810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=PUW38_16810;product=phosphoethanolamine transferase CptA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3448761 3449612 . + . ID=gene-PUW38_16815;Name=PUW38_16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16815 CP118116.1 Protein Homology CDS 3448761 3449612 . + 0 ID=cds-WJG80373.1;Parent=gene-PUW38_16815;Dbxref=NCBI_GP:WJG80373.1;Name=WJG80373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=PUW38_16815;product=AraC family transcriptional regulator;protein_id=WJG80373.1;transl_table=11 CP118116.1 Genbank gene 3449599 3449952 . - . ID=gene-PUW38_16820;Name=PUW38_16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16820 CP118116.1 Protein Homology CDS 3449599 3449952 . - 0 ID=cds-WJG80374.1;Parent=gene-PUW38_16820;Dbxref=NCBI_GP:WJG80374.1;Name=WJG80374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=PUW38_16820;product=PTS fructose-like transporter subunit IIB;protein_id=WJG80374.1;transl_table=11 CP118116.1 Genbank gene 3449954 3450832 . - . ID=gene-PUW38_16825;Name=PUW38_16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16825 CP118116.1 Protein Homology CDS 3449954 3450832 . - 0 ID=cds-WJG80375.1;Parent=gene-PUW38_16825;Dbxref=NCBI_GP:WJG80375.1;Name=WJG80375.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=PUW38_16825;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WJG80375.1;transl_table=11 CP118116.1 Genbank pseudogene 3450798 3453094 . - . ID=gene-PUW38_16830;Name=PUW38_16830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_16830;pseudo=true CP118116.1 Protein Homology CDS 3450798 3453094 . - 0 ID=cds-PUW38_16830;Parent=gene-PUW38_16830;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=PUW38_16830;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3453193 3453513 . - . ID=gene-PUW38_16835;Name=PUW38_16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16835 CP118116.1 Protein Homology CDS 3453193 3453513 . - 0 ID=cds-WJG80376.1;Parent=gene-PUW38_16835;Dbxref=NCBI_GP:WJG80376.1;Name=WJG80376.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=PUW38_16835;product=PTS fructose-like transporter subunit IIB;protein_id=WJG80376.1;transl_table=11 CP118116.1 Genbank gene 3453528 3454607 . - . ID=gene-PUW38_16840;Name=PUW38_16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16840 CP118116.1 Protein Homology CDS 3453528 3454607 . - 0 ID=cds-WJG80377.1;Parent=gene-PUW38_16840;Dbxref=NCBI_GP:WJG80377.1;Name=WJG80377.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=PUW38_16840;product=PTS fructose transporter subunit EIIC;protein_id=WJG80377.1;transl_table=11 CP118116.1 Genbank pseudogene 3454916 3457417 . + . ID=gene-PUW38_16845;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=pseudogene;locus_tag=PUW38_16845;pseudo=true CP118116.1 Protein Homology CDS 3454916 3457417 . + 0 ID=cds-PUW38_16845;Parent=gene-PUW38_16845;Note=internal stop;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=PUW38_16845;product=phosphoenolpyruvate--protein phosphotransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3457428 3458090 . + . ID=gene-PUW38_16850;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=PUW38_16850 CP118116.1 Protein Homology CDS 3457428 3458090 . + 0 ID=cds-WJG80378.1;Parent=gene-PUW38_16850;Dbxref=NCBI_GP:WJG80378.1;Name=WJG80378.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=PUW38_16850;product=fructose-6-phosphate aldolase;protein_id=WJG80378.1;transl_table=11 CP118116.1 Genbank gene 3458102 3459205 . + . ID=gene-PUW38_16855;Name=PUW38_16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16855 CP118116.1 Protein Homology CDS 3458102 3459205 . + 0 ID=cds-WJG80379.1;Parent=gene-PUW38_16855;Dbxref=NCBI_GP:WJG80379.1;Name=WJG80379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=PUW38_16855;product=glycerol dehydrogenase;protein_id=WJG80379.1;transl_table=11 CP118116.1 Genbank gene 3459464 3460087 . + . ID=gene-PUW38_16860;Name=PUW38_16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16860 CP118116.1 Protein Homology CDS 3459464 3460087 . + 0 ID=cds-WJG80380.1;Parent=gene-PUW38_16860;Dbxref=NCBI_GP:WJG80380.1;Name=WJG80380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=PUW38_16860;product=DUF1287 domain-containing protein;protein_id=WJG80380.1;transl_table=11 CP118116.1 Genbank gene 3460145 3462325 . - . ID=gene-PUW38_16865;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=PUW38_16865 CP118116.1 Protein Homology CDS 3460145 3462325 . - 0 ID=cds-WJG80381.1;Parent=gene-PUW38_16865;Dbxref=NCBI_GP:WJG80381.1;Name=WJG80381.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=PUW38_16865;product=catalase/peroxidase HPI;protein_id=WJG80381.1;transl_table=11 CP118116.1 Genbank gene 3462490 3463380 . - . ID=gene-PUW38_16870;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=PUW38_16870 CP118116.1 Protein Homology CDS 3462490 3463380 . - 0 ID=cds-WJG80382.1;Parent=gene-PUW38_16870;Dbxref=NCBI_GP:WJG80382.1;Name=WJG80382.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=PUW38_16870;product=methylenetetrahydrofolate reductase;protein_id=WJG80382.1;transl_table=11 CP118116.1 Genbank gene 3463659 3465140 . + . ID=gene-PUW38_16875;Name=PUW38_16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16875 CP118116.1 Protein Homology CDS 3463659 3465140 . + 0 ID=cds-WJG80383.1;Parent=gene-PUW38_16875;Dbxref=NCBI_GP:WJG80383.1;Name=WJG80383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090461.1;locus_tag=PUW38_16875;product=PLP-dependent aminotransferase family protein;protein_id=WJG80383.1;transl_table=11 CP118116.1 Genbank gene 3465085 3466161 . - . ID=gene-PUW38_16880;Name=PUW38_16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16880 CP118116.1 Protein Homology CDS 3465085 3466161 . - 0 ID=cds-WJG80384.1;Parent=gene-PUW38_16880;Dbxref=NCBI_GP:WJG80384.1;Name=WJG80384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976816.1;locus_tag=PUW38_16880;product=alanine racemase 3;protein_id=WJG80384.1;transl_table=11 CP118116.1 Genbank gene 3466158 3467396 . - . ID=gene-PUW38_16885;Name=PUW38_16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16885 CP118116.1 Protein Homology CDS 3466158 3467396 . - 0 ID=cds-WJG80385.1;Parent=gene-PUW38_16885;Dbxref=NCBI_GP:WJG80385.1;Name=WJG80385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341216.1;locus_tag=PUW38_16885;product=serine hydroxymethyltransferase;protein_id=WJG80385.1;transl_table=11 CP118116.1 Genbank gene 3467660 3469216 . - . ID=gene-PUW38_16890;Name=PUW38_16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16890 CP118116.1 Protein Homology CDS 3467660 3469216 . - 0 ID=cds-WJG80386.1;Parent=gene-PUW38_16890;Dbxref=NCBI_GP:WJG80386.1;Name=WJG80386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=PUW38_16890;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WJG80386.1;transl_table=11 CP118116.1 Genbank pseudogene 3469352 3470475 . + . ID=gene-PUW38_16895;Name=PUW38_16895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_16895;pseudo=true CP118116.1 Protein Homology CDS 3469352 3470475 . + 0 ID=cds-PUW38_16895;Parent=gene-PUW38_16895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=PUW38_16895;product=cytoplasmic protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3470709 3471707 . + . ID=gene-PUW38_16900;Name=PUW38_16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16900 CP118116.1 Protein Homology CDS 3470709 3471707 . + 0 ID=cds-WJG80387.1;Parent=gene-PUW38_16900;Dbxref=NCBI_GP:WJG80387.1;Name=WJG80387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=PUW38_16900;product=hypothetical protein;protein_id=WJG80387.1;transl_table=11 CP118116.1 Genbank gene 3471710 3472567 . + . ID=gene-PUW38_16905;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=PUW38_16905 CP118116.1 Protein Homology CDS 3471710 3472567 . + 0 ID=cds-WJG80388.1;Parent=gene-PUW38_16905;Dbxref=NCBI_GP:WJG80388.1;Name=WJG80388.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=PUW38_16905;product=small-conductance mechanosensitive channel MscS;protein_id=WJG80388.1;transl_table=11 CP118116.1 Genbank pseudogene 3472683 3475113 . - . ID=gene-PUW38_16910;Name=PUW38_16910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_16910;pseudo=true CP118116.1 Protein Homology CDS 3472683 3475113 . - 0 ID=cds-PUW38_16910;Parent=gene-PUW38_16910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=PUW38_16910;product=bifunctional aspartate kinase/homoserine dehydrogenase II;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3475116 3476276 . - . ID=gene-PUW38_16915;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=PUW38_16915 CP118116.1 Protein Homology CDS 3475116 3476276 . - 0 ID=cds-WJG83271.1;Parent=gene-PUW38_16915;Dbxref=NCBI_GP:WJG83271.1;Name=WJG83271.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=PUW38_16915;product=cystathionine gamma-synthase;protein_id=WJG83271.1;transl_table=11 CP118116.1 Genbank gene 3476541 3476858 . + . ID=gene-PUW38_16920;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=PUW38_16920 CP118116.1 Protein Homology CDS 3476541 3476858 . + 0 ID=cds-WJG80389.1;Parent=gene-PUW38_16920;Dbxref=NCBI_GP:WJG80389.1;Name=WJG80389.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=PUW38_16920;product=met regulon transcriptional regulator MetJ;protein_id=WJG80389.1;transl_table=11 CP118116.1 Genbank pseudogene 3477314 3479102 . + . ID=gene-PUW38_16925;Name=PUW38_16925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_16925;pseudo=true CP118116.1 Protein Homology CDS 3477314 3479102 . + 0 ID=cds-PUW38_16925;Parent=gene-PUW38_16925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=PUW38_16925;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3479303 3479965 . + . ID=gene-PUW38_16930;Name=PUW38_16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16930 CP118116.1 Protein Homology CDS 3479303 3479965 . + 0 ID=cds-WJG80390.1;Parent=gene-PUW38_16930;Dbxref=NCBI_GP:WJG80390.1;Name=WJG80390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=PUW38_16930;product=TIGR02117 family protein;protein_id=WJG80390.1;transl_table=11 CP118116.1 Genbank gene 3480010 3480222 . - . ID=gene-PUW38_16935;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=PUW38_16935 CP118116.1 Protein Homology CDS 3480010 3480222 . - 0 ID=cds-WJG83272.1;Parent=gene-PUW38_16935;Dbxref=NCBI_GP:WJG83272.1;Name=WJG83272.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmE;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=PUW38_16935;product=50S ribosomal protein L31;protein_id=WJG83272.1;transl_table=11 CP118116.1 Genbank gene 3480426 3482624 . + . ID=gene-PUW38_16940;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=PUW38_16940 CP118116.1 Protein Homology CDS 3480426 3482624 . + 0 ID=cds-WJG80391.1;Parent=gene-PUW38_16940;Dbxref=NCBI_GP:WJG80391.1;Name=WJG80391.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=PUW38_16940;product=primosomal protein N';protein_id=WJG80391.1;transl_table=11 CP118116.1 Genbank gene 3482779 3483804 . + . ID=gene-PUW38_16945;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=PUW38_16945 CP118116.1 Protein Homology CDS 3482779 3483804 . + 0 ID=cds-WJG80392.1;Parent=gene-PUW38_16945;Dbxref=NCBI_GP:WJG80392.1;Name=WJG80392.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=PUW38_16945;product=DNA-binding transcriptional regulator CytR;protein_id=WJG80392.1;transl_table=11 CP118116.1 Genbank gene 3483898 3484872 . + . ID=gene-PUW38_16950;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=PUW38_16950 CP118116.1 Protein Homology CDS 3483898 3484872 . + 0 ID=cds-WJG80393.1;Parent=gene-PUW38_16950;Dbxref=NCBI_GP:WJG80393.1;Name=WJG80393.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=PUW38_16950;product=cell division protein FtsN;protein_id=WJG80393.1;transl_table=11 CP118116.1 Genbank pseudogene 3484964 3485493 . + . ID=gene-PUW38_16955;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=pseudogene;locus_tag=PUW38_16955;pseudo=true CP118116.1 Protein Homology CDS 3484964 3485493 . + 0 ID=cds-PUW38_16955;Parent=gene-PUW38_16955;Note=frameshifted;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=PUW38_16955;product=ATP-dependent protease subunit HslV;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3485503 3486834 . + . ID=gene-PUW38_16960;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=PUW38_16960 CP118116.1 Protein Homology CDS 3485503 3486834 . + 0 ID=cds-WJG80394.1;Parent=gene-PUW38_16960;Dbxref=NCBI_GP:WJG80394.1;Name=WJG80394.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=PUW38_16960;product=HslU--HslV peptidase ATPase subunit;protein_id=WJG80394.1;transl_table=11 CP118116.1 Genbank gene 3486901 3487830 . + . ID=gene-PUW38_16965;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=PUW38_16965 CP118116.1 Protein Homology CDS 3486901 3487830 . + 0 ID=cds-WJG80395.1;Parent=gene-PUW38_16965;Dbxref=NCBI_GP:WJG80395.1;Name=WJG80395.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=PUW38_16965;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WJG80395.1;transl_table=11 CP118116.1 Genbank gene 3487923 3488408 . + . ID=gene-PUW38_16970;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=PUW38_16970 CP118116.1 Protein Homology CDS 3487923 3488408 . + 0 ID=cds-WJG80396.1;Parent=gene-PUW38_16970;Dbxref=NCBI_GP:WJG80396.1;Name=WJG80396.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=PUW38_16970;product=ribonuclease E activity regulator RraA;protein_id=WJG80396.1;transl_table=11 CP118116.1 Genbank gene 3488630 3488869 . - . ID=gene-PUW38_16975;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=PUW38_16975 CP118116.1 Protein Homology CDS 3488630 3488869 . - 0 ID=cds-WJG80397.1;Parent=gene-PUW38_16975;Dbxref=NCBI_GP:WJG80397.1;Name=WJG80397.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=PUW38_16975;product=septal ring assembly protein ZapB;protein_id=WJG80397.1;transl_table=11 CP118116.1 Genbank gene 3489268 3490113 . + . ID=gene-PUW38_16980;Name=PUW38_16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_16980 CP118116.1 Protein Homology CDS 3489268 3490113 . + 0 ID=cds-WJG80398.1;Parent=gene-PUW38_16980;Dbxref=NCBI_GP:WJG80398.1;Name=WJG80398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=PUW38_16980;product=aquaporin;protein_id=WJG80398.1;transl_table=11 CP118116.1 Genbank gene 3490134 3491642 . + . ID=gene-PUW38_16985;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=PUW38_16985 CP118116.1 Protein Homology CDS 3490134 3491642 . + 0 ID=cds-WJG80399.1;Parent=gene-PUW38_16985;Dbxref=NCBI_GP:WJG80399.1;Name=WJG80399.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=PUW38_16985;product=glycerol kinase GlpK;protein_id=WJG80399.1;transl_table=11 CP118116.1 Genbank gene 3491754 3492764 . + . ID=gene-PUW38_16990;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=PUW38_16990 CP118116.1 Protein Homology CDS 3491754 3492764 . + 0 ID=cds-WJG80400.1;Parent=gene-PUW38_16990;Dbxref=NCBI_GP:WJG80400.1;Name=WJG80400.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=PUW38_16990;product=class II fructose-bisphosphatase;protein_id=WJG80400.1;transl_table=11 CP118116.1 Genbank gene 3492861 3493607 . + . ID=gene-PUW38_16995;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=PUW38_16995 CP118116.1 Protein Homology CDS 3492861 3493607 . + 0 ID=cds-WJG80401.1;Parent=gene-PUW38_16995;Dbxref=NCBI_GP:WJG80401.1;Name=WJG80401.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=PUW38_16995;product=ferredoxin--NADP(+) reductase;protein_id=WJG80401.1;transl_table=11 CP118116.1 Genbank gene 3493713 3494141 . - . ID=gene-PUW38_17000;Name=PUW38_17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17000 CP118116.1 Protein Homology CDS 3493713 3494141 . - 0 ID=cds-WJG80402.1;Parent=gene-PUW38_17000;Dbxref=NCBI_GP:WJG80402.1;Name=WJG80402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006724708.1;locus_tag=PUW38_17000;product=DUF805 domain-containing protein;protein_id=WJG80402.1;transl_table=11 CP118116.1 Genbank gene 3494242 3494838 . + . ID=gene-PUW38_17005;Name=PUW38_17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17005 CP118116.1 Protein Homology CDS 3494242 3494838 . + 0 ID=cds-WJG80403.1;Parent=gene-PUW38_17005;Dbxref=NCBI_GP:WJG80403.1;Name=WJG80403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=PUW38_17005;product=YiiQ family protein;protein_id=WJG80403.1;transl_table=11 CP118116.1 Genbank gene 3494951 3495718 . + . ID=gene-PUW38_17010;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=PUW38_17010 CP118116.1 Protein Homology CDS 3494951 3495718 . + 0 ID=cds-WJG80404.1;Parent=gene-PUW38_17010;Dbxref=NCBI_GP:WJG80404.1;Name=WJG80404.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=PUW38_17010;product=triose-phosphate isomerase;protein_id=WJG80404.1;transl_table=11 CP118116.1 Genbank gene 3495810 3496574 . - . ID=gene-PUW38_17015;Name=PUW38_17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17015 CP118116.1 Protein Homology CDS 3495810 3496574 . - 0 ID=cds-WJG80405.1;Parent=gene-PUW38_17015;Dbxref=NCBI_GP:WJG80405.1;Name=WJG80405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=PUW38_17015;product=epimerase;protein_id=WJG80405.1;transl_table=11 CP118116.1 Genbank gene 3496584 3496874 . - . ID=gene-PUW38_17020;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=PUW38_17020 CP118116.1 Protein Homology CDS 3496584 3496874 . - 0 ID=cds-WJG83273.1;Parent=gene-PUW38_17020;Dbxref=NCBI_GP:WJG83273.1;Name=WJG83273.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=PUW38_17020;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WJG83273.1;transl_table=11 CP118116.1 Genbank gene 3496956 3497831 . - . ID=gene-PUW38_17025;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=PUW38_17025 CP118116.1 Protein Homology CDS 3496956 3497831 . - 0 ID=cds-WJG80406.1;Parent=gene-PUW38_17025;Dbxref=NCBI_GP:WJG80406.1;Name=WJG80406.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=PUW38_17025;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WJG80406.1;transl_table=11 CP118116.1 Genbank gene 3497860 3498882 . - . ID=gene-PUW38_17030;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=PUW38_17030 CP118116.1 Protein Homology CDS 3497860 3498882 . - 0 ID=cds-WJG80407.1;Parent=gene-PUW38_17030;Dbxref=NCBI_GP:WJG80407.1;Name=WJG80407.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=PUW38_17030;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WJG80407.1;transl_table=11 CP118116.1 Genbank gene 3498911 3499912 . - . ID=gene-PUW38_17035;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=PUW38_17035 CP118116.1 Protein Homology CDS 3498911 3499912 . - 0 ID=cds-WJG80408.1;Parent=gene-PUW38_17035;Dbxref=NCBI_GP:WJG80408.1;Name=WJG80408.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=PUW38_17035;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WJG80408.1;transl_table=11 CP118116.1 Genbank gene 3499909 3500952 . - . ID=gene-PUW38_17040;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=PUW38_17040 CP118116.1 Protein Homology CDS 3499909 3500952 . - 0 ID=cds-WJG80409.1;Parent=gene-PUW38_17040;Dbxref=NCBI_GP:WJG80409.1;Name=WJG80409.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=PUW38_17040;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WJG80409.1;transl_table=11 CP118116.1 Genbank gene 3500946 3502481 . - . ID=gene-PUW38_17045;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=PUW38_17045 CP118116.1 Protein Homology CDS 3500946 3502481 . - 0 ID=cds-WJG80410.1;Parent=gene-PUW38_17045;Dbxref=NCBI_GP:WJG80410.1;Name=WJG80410.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=PUW38_17045;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WJG80410.1;transl_table=11 CP118116.1 Genbank gene 3502738 3503697 . + . ID=gene-PUW38_17050;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=PUW38_17050 CP118116.1 Protein Homology CDS 3502738 3503697 . + 0 ID=cds-WJG80411.1;Parent=gene-PUW38_17050;Dbxref=NCBI_GP:WJG80411.1;Name=WJG80411.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=PUW38_17050;product=transcriptional regulator LsrR;protein_id=WJG80411.1;transl_table=11 CP118116.1 Genbank gene 3503784 3505376 . + . ID=gene-PUW38_17055;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=PUW38_17055 CP118116.1 Protein Homology CDS 3503784 3505376 . + 0 ID=cds-WJG80412.1;Parent=gene-PUW38_17055;Dbxref=NCBI_GP:WJG80412.1;Name=WJG80412.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=PUW38_17055;product=autoinducer-2 kinase;protein_id=WJG80412.1;transl_table=11 CP118116.1 Genbank gene 3505390 3505740 . + . ID=gene-PUW38_17060;Name=PUW38_17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17060 CP118116.1 Protein Homology CDS 3505390 3505740 . + 0 ID=cds-WJG80413.1;Parent=gene-PUW38_17060;Dbxref=NCBI_GP:WJG80413.1;Name=WJG80413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=PUW38_17060;product=cupin domain-containing protein;protein_id=WJG80413.1;transl_table=11 CP118116.1 Genbank pseudogene 3505830 3505970 . - . ID=gene-PUW38_17065;Name=PUW38_17065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17065;pseudo=true CP118116.1 Protein Homology CDS 3505830 3505970 . - 0 ID=cds-PUW38_17065;Parent=gene-PUW38_17065;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=PUW38_17065;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3506028 3506147 . - . ID=gene-PUW38_17070;Name=PUW38_17070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17070;pseudo=true CP118116.1 Protein Homology CDS 3506028 3506147 . - 0 ID=cds-PUW38_17070;Parent=gene-PUW38_17070;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=PUW38_17070;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3506245 3506967 . - . ID=gene-PUW38_17075;Name=PUW38_17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17075 CP118116.1 Protein Homology CDS 3506245 3506967 . - 0 ID=cds-WJG80414.1;Parent=gene-PUW38_17075;Dbxref=NCBI_GP:WJG80414.1;Name=WJG80414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=PUW38_17075;product=GntR family transcriptional regulator;protein_id=WJG80414.1;transl_table=11 CP118116.1 Genbank gene 3507030 3508070 . - . ID=gene-PUW38_17080;Name=PUW38_17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17080 CP118116.1 Protein Homology CDS 3507030 3508070 . - 0 ID=cds-WJG80415.1;Parent=gene-PUW38_17080;Dbxref=NCBI_GP:WJG80415.1;Name=WJG80415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=PUW38_17080;product=ADP-ribosylglycohydrolase family protein;protein_id=WJG80415.1;transl_table=11 CP118116.1 Genbank pseudogene 3508080 3509038 . - . ID=gene-PUW38_17085;Name=PUW38_17085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17085;pseudo=true CP118116.1 Protein Homology CDS 3508080 3509038 . - 0 ID=cds-PUW38_17085;Parent=gene-PUW38_17085;Note=frameshifted;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=PUW38_17085;product=aminoimidazole riboside kinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3509049 3510383 . - . ID=gene-PUW38_17090;Name=PUW38_17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17090 CP118116.1 Protein Homology CDS 3509049 3510383 . - 0 ID=cds-WJG80416.1;Parent=gene-PUW38_17090;Dbxref=NCBI_GP:WJG80416.1;Name=WJG80416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=PUW38_17090;product=MFS transporter;protein_id=WJG80416.1;transl_table=11 CP118116.1 Genbank gene 3510646 3511401 . - . ID=gene-PUW38_17095;Name=PUW38_17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17095 CP118116.1 Protein Homology CDS 3510646 3511401 . - 0 ID=cds-WJG80417.1;Parent=gene-PUW38_17095;Dbxref=NCBI_GP:WJG80417.1;Name=WJG80417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=PUW38_17095;product=CDP-diacylglycerol diphosphatase;protein_id=WJG80417.1;transl_table=11 CP118116.1 Genbank gene 3511502 3512491 . - . ID=gene-PUW38_17100;Name=PUW38_17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17100 CP118116.1 Protein Homology CDS 3511502 3512491 . - 0 ID=cds-WJG80418.1;Parent=gene-PUW38_17100;Dbxref=NCBI_GP:WJG80418.1;Name=WJG80418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=PUW38_17100;product=sulfate ABC transporter substrate-binding protein;protein_id=WJG80418.1;transl_table=11 CP118116.1 Genbank gene 3512695 3513657 . - . ID=gene-PUW38_17105;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=PUW38_17105 CP118116.1 Protein Homology CDS 3512695 3513657 . - 0 ID=cds-WJG80419.1;Parent=gene-PUW38_17105;Dbxref=NCBI_GP:WJG80419.1;Name=WJG80419.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=PUW38_17105;product=6-phosphofructokinase;protein_id=WJG80419.1;transl_table=11 CP118116.1 Genbank gene 3513842 3514744 . - . ID=gene-PUW38_17110;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=PUW38_17110 CP118116.1 Protein Homology CDS 3513842 3514744 . - 0 ID=cds-WJG80420.1;Parent=gene-PUW38_17110;Dbxref=NCBI_GP:WJG80420.1;Name=WJG80420.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=PUW38_17110;product=CDF family cation-efflux transporter FieF;protein_id=WJG80420.1;transl_table=11 CP118116.1 Genbank gene 3514891 3515391 . - . ID=gene-PUW38_17115;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=PUW38_17115 CP118116.1 Protein Homology CDS 3514891 3515391 . - 0 ID=cds-WJG80421.1;Parent=gene-PUW38_17115;Dbxref=NCBI_GP:WJG80421.1;Name=WJG80421.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=PUW38_17115;product=cell-envelope stress modulator CpxP;protein_id=WJG80421.1;transl_table=11 CP118116.1 Genbank gene 3515542 3516240 . + . ID=gene-PUW38_17120;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=PUW38_17120 CP118116.1 Protein Homology CDS 3515542 3516240 . + 0 ID=cds-WJG80422.1;Parent=gene-PUW38_17120;Dbxref=NCBI_GP:WJG80422.1;Name=WJG80422.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=PUW38_17120;product=envelope stress response regulator transcription factor CpxR;protein_id=WJG80422.1;transl_table=11 CP118116.1 Genbank gene 3516237 3517610 . + . ID=gene-PUW38_17125;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=PUW38_17125 CP118116.1 Protein Homology CDS 3516237 3517610 . + 0 ID=cds-WJG80423.1;Parent=gene-PUW38_17125;Dbxref=NCBI_GP:WJG80423.1;Name=WJG80423.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=PUW38_17125;product=envelope stress sensor histidine kinase CpxA;protein_id=WJG80423.1;transl_table=11 CP118116.1 Genbank gene 3517658 3517861 . - . ID=gene-PUW38_17130;Name=PUW38_17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17130 CP118116.1 Protein Homology CDS 3517658 3517861 . - 0 ID=cds-WJG80424.1;Parent=gene-PUW38_17130;Dbxref=NCBI_GP:WJG80424.1;Name=WJG80424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=PUW38_17130;product=hypothetical protein;protein_id=WJG80424.1;transl_table=11 CP118116.1 Genbank gene 3517982 3518377 . - . ID=gene-PUW38_17135;Name=PUW38_17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17135 CP118116.1 Protein Homology CDS 3517982 3518377 . - 0 ID=cds-WJG80425.1;Parent=gene-PUW38_17135;Dbxref=NCBI_GP:WJG80425.1;Name=WJG80425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=PUW38_17135;product=nuclear transport factor 2 family protein;protein_id=WJG80425.1;transl_table=11 CP118116.1 Genbank pseudogene 3518389 3519078 . - . ID=gene-PUW38_17140;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=pseudogene;locus_tag=PUW38_17140;pseudo=true CP118116.1 Protein Homology CDS 3518389 3519078 . - 0 ID=cds-PUW38_17140;Parent=gene-PUW38_17140;Note=internal stop;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=PUW38_17140;product=6-hydroxyaminopurine reductase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3519148 3519767 . - . ID=gene-PUW38_17145;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=pseudogene;locus_tag=PUW38_17145;pseudo=true CP118116.1 Protein Homology CDS 3519148 3519767 . - 0 ID=cds-PUW38_17145;Parent=gene-PUW38_17145;Note=frameshifted;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=PUW38_17145;product=superoxide dismutase [Mn];pseudo=true;transl_table=11 CP118116.1 Genbank gene 3520096 3521079 . + . ID=gene-PUW38_17150;Name=PUW38_17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17150 CP118116.1 Protein Homology CDS 3520096 3521079 . + 0 ID=cds-WJG80426.1;Parent=gene-PUW38_17150;Dbxref=NCBI_GP:WJG80426.1;Name=WJG80426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=PUW38_17150;product=TRAP transporter substrate-binding protein;protein_id=WJG80426.1;transl_table=11 CP118116.1 Genbank gene 3521098 3521613 . + . ID=gene-PUW38_17155;Name=PUW38_17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17155 CP118116.1 Protein Homology CDS 3521098 3521613 . + 0 ID=cds-WJG80427.1;Parent=gene-PUW38_17155;Dbxref=NCBI_GP:WJG80427.1;Name=WJG80427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=PUW38_17155;product=TRAP transporter small permease;protein_id=WJG80427.1;transl_table=11 CP118116.1 Genbank gene 3521606 3522913 . + . ID=gene-PUW38_17160;Name=PUW38_17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17160 CP118116.1 Protein Homology CDS 3521606 3522913 . + 0 ID=cds-WJG80428.1;Parent=gene-PUW38_17160;Dbxref=NCBI_GP:WJG80428.1;Name=WJG80428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=PUW38_17160;product=TRAP transporter large permease;protein_id=WJG80428.1;transl_table=11 CP118116.1 Genbank gene 3523070 3523753 . - . ID=gene-PUW38_17165;Name=PUW38_17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17165 CP118116.1 Protein Homology CDS 3523070 3523753 . - 0 ID=cds-WJG80429.1;Parent=gene-PUW38_17165;Dbxref=NCBI_GP:WJG80429.1;Name=WJG80429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=PUW38_17165;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WJG80429.1;transl_table=11 CP118116.1 Genbank gene 3524372 3525406 . + . ID=gene-PUW38_17170;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=PUW38_17170 CP118116.1 Protein Homology CDS 3524372 3525406 . + 0 ID=cds-WJG80430.1;Parent=gene-PUW38_17170;Dbxref=NCBI_GP:WJG80430.1;Name=WJG80430.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=PUW38_17170;product=L-rhamnose/proton symporter RhaT;protein_id=WJG80430.1;transl_table=11 CP118116.1 Genbank pseudogene 3525403 3526250 . - . ID=gene-PUW38_17175;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=pseudogene;locus_tag=PUW38_17175;pseudo=true CP118116.1 Protein Homology CDS 3525403 3526250 . - 0 ID=cds-PUW38_17175;Parent=gene-PUW38_17175;Note=frameshifted;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=PUW38_17175;product=HTH-type transcriptional activator RhaR;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3526403 3527239 . - . ID=gene-PUW38_17180;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=PUW38_17180 CP118116.1 Protein Homology CDS 3526403 3527239 . - 0 ID=cds-WJG80431.1;Parent=gene-PUW38_17180;Dbxref=NCBI_GP:WJG80431.1;Name=WJG80431.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=PUW38_17180;product=HTH-type transcriptional activator RhaS;protein_id=WJG80431.1;transl_table=11 CP118116.1 Genbank gene 3527527 3528996 . + . ID=gene-PUW38_17185;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=PUW38_17185 CP118116.1 Protein Homology CDS 3527527 3528996 . + 0 ID=cds-WJG80432.1;Parent=gene-PUW38_17185;Dbxref=NCBI_GP:WJG80432.1;Name=WJG80432.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=PUW38_17185;product=rhamnulokinase;protein_id=WJG80432.1;transl_table=11 CP118116.1 Genbank gene 3528993 3530252 . + . ID=gene-PUW38_17190;Name=PUW38_17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17190 CP118116.1 Protein Homology CDS 3528993 3530252 . + 0 ID=cds-WJG80433.1;Parent=gene-PUW38_17190;Dbxref=NCBI_GP:WJG80433.1;Name=WJG80433.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=PUW38_17190;product=L-rhamnose isomerase;protein_id=WJG80433.1;transl_table=11 CP118116.1 Genbank gene 3530395 3531222 . + . ID=gene-PUW38_17195;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=PUW38_17195 CP118116.1 Protein Homology CDS 3530395 3531222 . + 0 ID=cds-WJG80434.1;Parent=gene-PUW38_17195;Dbxref=NCBI_GP:WJG80434.1;Name=WJG80434.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=PUW38_17195;product=rhamnulose-1-phosphate aldolase;protein_id=WJG80434.1;transl_table=11 CP118116.1 Genbank pseudogene 3531409 3532496 . + . ID=gene-PUW38_17200;Name=PUW38_17200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17200;pseudo=true CP118116.1 Protein Homology CDS 3531409 3532496 . + 0 ID=cds-PUW38_17200;Parent=gene-PUW38_17200;Note=frameshifted;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012678.2;locus_tag=PUW38_17200;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3532493 3532807 . + . ID=gene-PUW38_17205;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=PUW38_17205 CP118116.1 Protein Homology CDS 3532493 3532807 . + 0 ID=cds-WJG80435.1;Parent=gene-PUW38_17205;Dbxref=NCBI_GP:WJG80435.1;Name=WJG80435.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=PUW38_17205;product=L-rhamnose mutarotase;protein_id=WJG80435.1;transl_table=11 CP118116.1 Genbank gene 3532896 3533444 . - . ID=gene-PUW38_17210;Name=PUW38_17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17210 CP118116.1 Protein Homology CDS 3532896 3533444 . - 0 ID=cds-WJG80436.1;Parent=gene-PUW38_17210;Dbxref=NCBI_GP:WJG80436.1;Name=WJG80436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=PUW38_17210;product=helix-turn-helix domain-containing protein;protein_id=WJG80436.1;transl_table=11 CP118116.1 Genbank gene 3533545 3534204 . + . ID=gene-PUW38_17215;Name=PUW38_17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17215 CP118116.1 Protein Homology CDS 3533545 3534204 . + 0 ID=cds-WJG80437.1;Parent=gene-PUW38_17215;Dbxref=NCBI_GP:WJG80437.1;Name=WJG80437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=PUW38_17215;product=AzlC family ABC transporter permease;protein_id=WJG80437.1;transl_table=11 CP118116.1 Genbank gene 3534204 3534527 . + . ID=gene-PUW38_17220;Name=PUW38_17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17220 CP118116.1 Protein Homology CDS 3534204 3534527 . + 0 ID=cds-WJG80438.1;Parent=gene-PUW38_17220;Dbxref=NCBI_GP:WJG80438.1;Name=WJG80438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=PUW38_17220;product=AzlD domain-containing protein;protein_id=WJG80438.1;transl_table=11 CP118116.1 Genbank gene 3534883 3535950 . - . ID=gene-PUW38_17225;Name=PUW38_17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17225 CP118116.1 Protein Homology CDS 3534883 3535950 . - 0 ID=cds-WJG80439.1;Parent=gene-PUW38_17225;Dbxref=NCBI_GP:WJG80439.1;Name=WJG80439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=PUW38_17225;product=DUF3829 domain-containing protein;protein_id=WJG80439.1;transl_table=11 CP118116.1 Genbank pseudogene 3536132 3537152 . + . ID=gene-PUW38_17230;Name=PUW38_17230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17230;pseudo=true CP118116.1 Protein Homology CDS 3536132 3537152 . + 0 ID=cds-PUW38_17230;Parent=gene-PUW38_17230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=PUW38_17230;product=YiiG family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3537419 3538255 . - . ID=gene-PUW38_17235;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=PUW38_17235 CP118116.1 Protein Homology CDS 3537419 3538255 . - 0 ID=cds-WJG80440.1;Parent=gene-PUW38_17235;Dbxref=NCBI_GP:WJG80440.1;Name=WJG80440.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=PUW38_17235;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WJG80440.1;transl_table=11 CP118116.1 Genbank gene 3538450 3541500 . + . ID=gene-PUW38_17240;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PUW38_17240 CP118116.1 Protein Homology CDS 3538450 3541500 . + 0 ID=cds-WJG80441.1;Parent=gene-PUW38_17240;Dbxref=NCBI_GP:WJG80441.1;Name=WJG80441.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=PUW38_17240;product=formate dehydrogenase-N subunit alpha;protein_id=WJG80441.1;transl_except=(pos:3539035..3539037%2Caa:Sec);transl_table=11 CP118116.1 Genbank gene 3541513 3542415 . + . ID=gene-PUW38_17245;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PUW38_17245 CP118116.1 Protein Homology CDS 3541513 3542415 . + 0 ID=cds-WJG80442.1;Parent=gene-PUW38_17245;Dbxref=NCBI_GP:WJG80442.1;Name=WJG80442.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=PUW38_17245;product=formate dehydrogenase subunit beta;protein_id=WJG80442.1;transl_table=11 CP118116.1 Genbank gene 3542412 3543047 . + . ID=gene-PUW38_17250;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=PUW38_17250 CP118116.1 Protein Homology CDS 3542412 3543047 . + 0 ID=cds-WJG80443.1;Parent=gene-PUW38_17250;Dbxref=NCBI_GP:WJG80443.1;Name=WJG80443.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=PUW38_17250;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WJG80443.1;transl_table=11 CP118116.1 Genbank gene 3543044 3543973 . + . ID=gene-PUW38_17255;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=PUW38_17255 CP118116.1 Protein Homology CDS 3543044 3543973 . + 0 ID=cds-WJG80444.1;Parent=gene-PUW38_17255;Dbxref=NCBI_GP:WJG80444.1;Name=WJG80444.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=PUW38_17255;product=formate dehydrogenase accessory protein FdhE;protein_id=WJG80444.1;transl_table=11 CP118116.1 Genbank gene 3544020 3544310 . - . ID=gene-PUW38_17260;Name=PUW38_17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17260 CP118116.1 Protein Homology CDS 3544020 3544310 . - 0 ID=cds-WJG80445.1;Parent=gene-PUW38_17260;Dbxref=NCBI_GP:WJG80445.1;Name=WJG80445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=PUW38_17260;product=DNA-binding transcriptional regulator;protein_id=WJG80445.1;transl_table=11 CP118116.1 Genbank gene 3544311 3544622 . - . ID=gene-PUW38_17265;Name=PUW38_17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17265 CP118116.1 Protein Homology CDS 3544311 3544622 . - 0 ID=cds-WJG80446.1;Parent=gene-PUW38_17265;Dbxref=NCBI_GP:WJG80446.1;Name=WJG80446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=PUW38_17265;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG80446.1;transl_table=11 CP118116.1 Genbank gene 3544840 3545769 . + . ID=gene-PUW38_17270;Name=PUW38_17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17270 CP118116.1 Protein Homology CDS 3544840 3545769 . + 0 ID=cds-WJG80447.1;Parent=gene-PUW38_17270;Dbxref=NCBI_GP:WJG80447.1;Name=WJG80447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=PUW38_17270;product=alpha/beta hydrolase;protein_id=WJG80447.1;transl_table=11 CP118116.1 Genbank gene 3545855 3546166 . + . ID=gene-PUW38_17275;Name=PUW38_17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17275 CP118116.1 Protein Homology CDS 3545855 3546166 . + 0 ID=cds-WJG80448.1;Parent=gene-PUW38_17275;Dbxref=NCBI_GP:WJG80448.1;Name=WJG80448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=PUW38_17275;product=type II toxin-antitoxin system HigB family toxin;protein_id=WJG80448.1;transl_table=11 CP118116.1 Genbank gene 3546163 3546609 . + . ID=gene-PUW38_17280;Name=PUW38_17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17280 CP118116.1 Protein Homology CDS 3546163 3546609 . + 0 ID=cds-WJG80449.1;Parent=gene-PUW38_17280;Dbxref=NCBI_GP:WJG80449.1;Name=WJG80449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=PUW38_17280;product=type II toxin-antitoxin system HigA family antitoxin;protein_id=WJG80449.1;transl_table=11 CP118116.1 Genbank gene 3546624 3547565 . - . ID=gene-PUW38_17285;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=PUW38_17285 CP118116.1 Protein Homology CDS 3546624 3547565 . - 0 ID=cds-WJG80450.1;Parent=gene-PUW38_17285;Dbxref=NCBI_GP:WJG80450.1;Name=WJG80450.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=PUW38_17285;product=fatty acid biosynthesis protein FabY;protein_id=WJG80450.1;transl_table=11 CP118116.1 Genbank gene 3547610 3548047 . - . ID=gene-PUW38_17290;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=PUW38_17290 CP118116.1 Protein Homology CDS 3547610 3548047 . - 0 ID=cds-WJG80451.1;Parent=gene-PUW38_17290;Dbxref=NCBI_GP:WJG80451.1;Name=WJG80451.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=PUW38_17290;product=D-aminoacyl-tRNA deacylase;protein_id=WJG80451.1;transl_table=11 CP118116.1 Genbank pseudogene 3548044 3548902 . - . ID=gene-PUW38_17295;Name=PUW38_17295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17295;pseudo=true CP118116.1 Protein Homology CDS 3548044 3548902 . - 0 ID=cds-PUW38_17295;Parent=gene-PUW38_17295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=PUW38_17295;product=virulence factor BrkB family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3548896 3549495 . - . ID=gene-PUW38_17300;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=PUW38_17300 CP118116.1 Protein Homology CDS 3548896 3549495 . - 0 ID=cds-WJG80452.1;Parent=gene-PUW38_17300;Dbxref=NCBI_GP:WJG80452.1;Name=WJG80452.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=PUW38_17300;product=glucose-1-phosphatase;protein_id=WJG80452.1;transl_table=11 CP118116.1 Genbank gene 3549686 3550489 . - . ID=gene-PUW38_17305;Name=PUW38_17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17305 CP118116.1 Protein Homology CDS 3549686 3550489 . - 0 ID=cds-WJG80453.1;Parent=gene-PUW38_17305;Dbxref=NCBI_GP:WJG80453.1;Name=WJG80453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=PUW38_17305;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG80453.1;transl_table=11 CP118116.1 Genbank pseudogene 3550523 3551419 . - . ID=gene-PUW38_17310;Name=PUW38_17310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17310;pseudo=true CP118116.1 Protein Homology CDS 3550523 3551419 . - 0 ID=cds-PUW38_17310;Parent=gene-PUW38_17310;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=PUW38_17310;product=sugar kinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3551584 3552480 . + . ID=gene-PUW38_17315;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=PUW38_17315 CP118116.1 Protein Homology CDS 3551584 3552480 . + 0 ID=cds-WJG80454.1;Parent=gene-PUW38_17315;Dbxref=NCBI_GP:WJG80454.1;Name=WJG80454.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=PUW38_17315;product=sulfolactaldehyde 3-reductase;protein_id=WJG80454.1;transl_table=11 CP118116.1 Genbank gene 3552503 3553381 . + . ID=gene-PUW38_17320;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=PUW38_17320 CP118116.1 Protein Homology CDS 3552503 3553381 . + 0 ID=cds-WJG80455.1;Parent=gene-PUW38_17320;Dbxref=NCBI_GP:WJG80455.1;Name=WJG80455.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=PUW38_17320;product=sulfofructosephosphate aldolase;protein_id=WJG80455.1;transl_table=11 CP118116.1 Genbank gene 3553397 3554638 . + . ID=gene-PUW38_17325;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=PUW38_17325 CP118116.1 Protein Homology CDS 3553397 3554638 . + 0 ID=cds-WJG80456.1;Parent=gene-PUW38_17325;Dbxref=NCBI_GP:WJG80456.1;Name=WJG80456.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=PUW38_17325;product=sulfoquinovose isomerase;protein_id=WJG80456.1;transl_table=11 CP118116.1 Genbank gene 3554642 3555499 . + . ID=gene-PUW38_17330;Name=PUW38_17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17330 CP118116.1 Protein Homology CDS 3554642 3555499 . + 0 ID=cds-WJG80457.1;Parent=gene-PUW38_17330;Dbxref=NCBI_GP:WJG80457.1;Name=WJG80457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=PUW38_17330;product=aldose-1-epimerase;protein_id=WJG80457.1;transl_table=11 CP118116.1 Genbank gene 3555543 3557579 . + . ID=gene-PUW38_17335;Name=PUW38_17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17335 CP118116.1 Protein Homology CDS 3555543 3557579 . + 0 ID=cds-WJG80458.1;Parent=gene-PUW38_17335;Dbxref=NCBI_GP:WJG80458.1;Name=WJG80458.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=PUW38_17335;product=alpha-glucosidase;protein_id=WJG80458.1;transl_table=11 CP118116.1 Genbank gene 3557625 3559007 . + . ID=gene-PUW38_17340;Name=PUW38_17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17340 CP118116.1 Protein Homology CDS 3557625 3559007 . + 0 ID=cds-WJG80459.1;Parent=gene-PUW38_17340;Dbxref=NCBI_GP:WJG80459.1;Name=WJG80459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=PUW38_17340;product=MFS transporter;protein_id=WJG80459.1;transl_table=11 CP118116.1 Genbank gene 3559053 3560474 . + . ID=gene-PUW38_17345;Name=PUW38_17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17345 CP118116.1 Protein Homology CDS 3559053 3560474 . + 0 ID=cds-WJG80460.1;Parent=gene-PUW38_17345;Dbxref=NCBI_GP:WJG80460.1;Name=WJG80460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=PUW38_17345;product=MFS transporter;protein_id=WJG80460.1;transl_table=11 CP118116.1 Genbank gene 3560542 3561234 . + . ID=gene-PUW38_17350;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=PUW38_17350 CP118116.1 Protein Homology CDS 3560542 3561234 . + 0 ID=cds-WJG80461.1;Parent=gene-PUW38_17350;Dbxref=NCBI_GP:WJG80461.1;Name=WJG80461.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=PUW38_17350;product=porin OmpL;protein_id=WJG80461.1;transl_table=11 CP118116.1 Genbank gene 3561391 3562239 . + . ID=gene-PUW38_17355;Name=PUW38_17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17355 CP118116.1 Protein Homology CDS 3561391 3562239 . + 0 ID=cds-WJG80462.1;Parent=gene-PUW38_17355;Dbxref=NCBI_GP:WJG80462.1;Name=WJG80462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=PUW38_17355;product=STM4015 family protein;protein_id=WJG80462.1;transl_table=11 CP118116.1 Genbank gene 3562252 3563277 . + . ID=gene-PUW38_17360;Name=PUW38_17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17360 CP118116.1 Protein Homology CDS 3562252 3563277 . + 0 ID=cds-WJG80463.1;Parent=gene-PUW38_17360;Dbxref=NCBI_GP:WJG80463.1;Name=WJG80463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=PUW38_17360;product=STM4014 family protein;protein_id=WJG80463.1;transl_table=11 CP118116.1 Genbank gene 3563270 3564145 . + . ID=gene-PUW38_17365;Name=PUW38_17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17365 CP118116.1 Protein Homology CDS 3563270 3564145 . + 0 ID=cds-WJG80464.1;Parent=gene-PUW38_17365;Dbxref=NCBI_GP:WJG80464.1;Name=WJG80464.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=PUW38_17365;product=STM4013/SEN3800 family hydrolase;protein_id=WJG80464.1;transl_table=11 CP118116.1 Genbank gene 3564147 3565388 . + . ID=gene-PUW38_17370;Name=PUW38_17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17370 CP118116.1 Protein Homology CDS 3564147 3565388 . + 0 ID=cds-WJG80465.1;Parent=gene-PUW38_17370;Dbxref=NCBI_GP:WJG80465.1;Name=WJG80465.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=PUW38_17370;product=STM4012 family radical SAM protein;protein_id=WJG80465.1;transl_table=11 CP118116.1 Genbank gene 3565385 3566263 . + . ID=gene-PUW38_17375;Name=PUW38_17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17375 CP118116.1 Protein Homology CDS 3565385 3566263 . + 0 ID=cds-WJG80466.1;Parent=gene-PUW38_17375;Dbxref=NCBI_GP:WJG80466.1;Name=WJG80466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=PUW38_17375;product=STM4011 family radical SAM protein;protein_id=WJG80466.1;transl_table=11 CP118116.1 Genbank gene 3566248 3566982 . + . ID=gene-PUW38_17380;Name=PUW38_17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17380 CP118116.1 Protein Homology CDS 3566248 3566982 . + 0 ID=cds-WJG80467.1;Parent=gene-PUW38_17380;Dbxref=NCBI_GP:WJG80467.1;Name=WJG80467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=PUW38_17380;product=Cof-type HAD-IIB family hydrolase;protein_id=WJG80467.1;transl_table=11 CP118116.1 Genbank pseudogene 3567037 3568858 . - . ID=gene-PUW38_17385;Name=typA;gbkey=Gene;gene=typA;gene_biotype=pseudogene;locus_tag=PUW38_17385;pseudo=true CP118116.1 Protein Homology CDS 3567037 3568858 . - 0 ID=cds-PUW38_17385;Parent=gene-PUW38_17385;Note=frameshifted;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=PUW38_17385;product=ribosome-dependent GTPase TypA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3569234 3570643 . + . ID=gene-PUW38_17390;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=PUW38_17390 CP118116.1 Protein Homology CDS 3569234 3570643 . + 0 ID=cds-WJG80468.1;Parent=gene-PUW38_17390;Dbxref=NCBI_GP:WJG80468.1;Name=WJG80468.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=PUW38_17390;product=glutamate--ammonia ligase;protein_id=WJG80468.1;transl_table=11 CP118116.1 Genbank gene 3570918 3571967 . + . ID=gene-PUW38_17395;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=PUW38_17395 CP118116.1 Protein Homology CDS 3570918 3571967 . + 0 ID=cds-WJG80469.1;Parent=gene-PUW38_17395;Dbxref=NCBI_GP:WJG80469.1;Name=WJG80469.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=PUW38_17395;product=nitrogen regulation protein NR(II);protein_id=WJG80469.1;transl_table=11 CP118116.1 Genbank gene 3571976 3573385 . + . ID=gene-PUW38_17400;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=PUW38_17400 CP118116.1 Protein Homology CDS 3571976 3573385 . + 0 ID=cds-WJG80470.1;Parent=gene-PUW38_17400;Dbxref=NCBI_GP:WJG80470.1;Name=WJG80470.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=PUW38_17400;product=nitrogen regulation protein NR(I);protein_id=WJG80470.1;transl_table=11 CP118116.1 Genbank gene 3573498 3573608 . + . ID=gene-PUW38_17405;Name=PUW38_17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17405 CP118116.1 Protein Homology CDS 3573498 3573608 . + 0 ID=cds-WJG80471.1;Parent=gene-PUW38_17405;Dbxref=NCBI_GP:WJG80471.1;Name=WJG80471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=PUW38_17405;product=YshB family small membrane protein;protein_id=WJG80471.1;transl_table=11 CP118116.1 Genbank gene 3573698 3575071 . - . ID=gene-PUW38_17410;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=PUW38_17410 CP118116.1 Protein Homology CDS 3573698 3575071 . - 0 ID=cds-WJG83274.1;Parent=gene-PUW38_17410;Dbxref=NCBI_GP:WJG83274.1;Name=WJG83274.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=PUW38_17410;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WJG83274.1;transl_table=11 CP118116.1 Genbank pseudogene 3575260 3575751 . - . ID=gene-PUW38_17415;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=pseudogene;locus_tag=PUW38_17415;pseudo=true CP118116.1 Protein Homology CDS 3575260 3575751 . - 0 ID=cds-PUW38_17415;Parent=gene-PUW38_17415;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121849.1;locus_tag=PUW38_17415;product=Der GTPase-activating protein YihI;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3575875 3576099 . - . ID=gene-PUW38_17420;Name=PUW38_17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17420 CP118116.1 Protein Homology CDS 3575875 3576099 . - 0 ID=cds-WJG80472.1;Parent=gene-PUW38_17420;Dbxref=NCBI_GP:WJG80472.1;Name=WJG80472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=PUW38_17420;product=hypothetical protein;protein_id=WJG80472.1;transl_table=11 CP118116.1 Genbank gene 3576339 3576971 . + . ID=gene-PUW38_17425;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=PUW38_17425 CP118116.1 Protein Homology CDS 3576339 3576971 . + 0 ID=cds-WJG80473.1;Parent=gene-PUW38_17425;Dbxref=NCBI_GP:WJG80473.1;Name=WJG80473.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=PUW38_17425;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WJG80473.1;transl_table=11 CP118116.1 Genbank pseudogene 3577306 3580090 . - . ID=gene-PUW38_17430;Name=polA;gbkey=Gene;gene=polA;gene_biotype=pseudogene;locus_tag=PUW38_17430;pseudo=true CP118116.1 Protein Homology CDS 3577306 3580090 . - 0 ID=cds-PUW38_17430;Parent=gene-PUW38_17430;Note=frameshifted;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=PUW38_17430;product=DNA polymerase I;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3580478 3581386 . + . ID=gene-PUW38_17435;Name=PUW38_17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17435 CP118116.1 Protein Homology CDS 3580478 3581386 . + 0 ID=cds-WJG80474.1;Parent=gene-PUW38_17435;Dbxref=NCBI_GP:WJG80474.1;Name=WJG80474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=PUW38_17435;product=acyltransferase;protein_id=WJG80474.1;transl_table=11 CP118116.1 Genbank gene 3581399 3582022 . - . ID=gene-PUW38_17440;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=PUW38_17440 CP118116.1 Protein Homology CDS 3581399 3582022 . - 0 ID=cds-WJG80475.1;Parent=gene-PUW38_17440;Dbxref=NCBI_GP:WJG80475.1;Name=WJG80475.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=PUW38_17440;product=thiol:disulfide interchange protein DsbA;protein_id=WJG80475.1;transl_table=11 CP118116.1 Genbank gene 3582039 3583025 . - . ID=gene-PUW38_17445;Name=PUW38_17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17445 CP118116.1 Protein Homology CDS 3582039 3583025 . - 0 ID=cds-WJG80476.1;Parent=gene-PUW38_17445;Dbxref=NCBI_GP:WJG80476.1;Name=WJG80476.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=PUW38_17445;product=serine/threonine protein kinase;protein_id=WJG80476.1;transl_table=11 CP118116.1 Genbank gene 3583102 3583371 . - . ID=gene-PUW38_17450;Name=PUW38_17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17450 CP118116.1 Protein Homology CDS 3583102 3583371 . - 0 ID=cds-WJG80477.1;Parent=gene-PUW38_17450;Dbxref=NCBI_GP:WJG80477.1;Name=WJG80477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=PUW38_17450;product=YihD family protein;protein_id=WJG80477.1;transl_table=11 CP118116.1 Genbank gene 3583441 3584025 . + . ID=gene-PUW38_17455;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=PUW38_17455 CP118116.1 Protein Homology CDS 3583441 3584025 . + 0 ID=cds-WJG80478.1;Parent=gene-PUW38_17455;Dbxref=NCBI_GP:WJG80478.1;Name=WJG80478.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=PUW38_17455;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WJG80478.1;transl_table=11 CP118116.1 Genbank gene 3584022 3584537 . + . ID=gene-PUW38_17460;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=PUW38_17460 CP118116.1 Protein Homology CDS 3584022 3584537 . + 0 ID=cds-WJG83275.1;Parent=gene-PUW38_17460;Dbxref=NCBI_GP:WJG83275.1;Name=WJG83275.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=PUW38_17460;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WJG83275.1;transl_table=11 CP118116.1 Genbank gene 3584809 3584924 . - . ID=gene-PUW38_17465;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW38_17465 CP118116.1 cmsearch rRNA 3584809 3584924 . - . ID=rna-PUW38_17465;Parent=gene-PUW38_17465;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17465;product=5S ribosomal RNA CP118116.1 cmsearch exon 3584809 3584924 . - . ID=exon-PUW38_17465-1;Parent=rna-PUW38_17465;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17465;product=5S ribosomal RNA CP118116.1 Genbank gene 3585121 3588109 . - . ID=gene-PUW38_17470;Name=PUW38_17470;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_17470 CP118116.1 cmsearch rRNA 3585121 3588109 . - . ID=rna-PUW38_17470;Parent=gene-PUW38_17470;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17470;product=23S ribosomal RNA CP118116.1 cmsearch exon 3585121 3588109 . - . ID=exon-PUW38_17470-1;Parent=rna-PUW38_17470;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17470;product=23S ribosomal RNA CP118116.1 Genbank gene 3588303 3588378 . - . ID=gene-PUW38_17475;Name=PUW38_17475;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17475 CP118116.1 tRNAscan-SE tRNA 3588303 3588378 . - . ID=rna-PUW38_17475;Parent=gene-PUW38_17475;anticodon=(pos:complement(3588342..3588344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17475;product=tRNA-Glu CP118116.1 tRNAscan-SE exon 3588303 3588378 . - . ID=exon-PUW38_17475-1;Parent=rna-PUW38_17475;anticodon=(pos:complement(3588342..3588344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17475;product=tRNA-Glu CP118116.1 Genbank gene 3588464 3590005 . - . ID=gene-PUW38_17480;Name=PUW38_17480;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_17480 CP118116.1 cmsearch rRNA 3588464 3590005 . - . ID=rna-PUW38_17480;Parent=gene-PUW38_17480;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17480;product=16S ribosomal RNA CP118116.1 cmsearch exon 3588464 3590005 . - . ID=exon-PUW38_17480-1;Parent=rna-PUW38_17480;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17480;product=16S ribosomal RNA CP118116.1 Genbank gene 3590627 3592216 . + . ID=gene-PUW38_17485;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=PUW38_17485 CP118116.1 Protein Homology CDS 3590627 3592216 . + 0 ID=cds-WJG80479.1;Parent=gene-PUW38_17485;Dbxref=NCBI_GP:WJG80479.1;Name=WJG80479.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=PUW38_17485;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WJG80479.1;transl_table=11 CP118116.1 Genbank gene 3592228 3593517 . + . ID=gene-PUW38_17490;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=PUW38_17490 CP118116.1 Protein Homology CDS 3592228 3593517 . + 0 ID=cds-WJG80480.1;Parent=gene-PUW38_17490;Dbxref=NCBI_GP:WJG80480.1;Name=WJG80480.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=PUW38_17490;product=phosphoribosylamine--glycine ligase;protein_id=WJG80480.1;transl_table=11 CP118116.1 Genbank gene 3593514 3594839 . - . ID=gene-PUW38_17495;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=PUW38_17495 CP118116.1 Protein Homology CDS 3593514 3594839 . - 0 ID=cds-WJG80481.1;Parent=gene-PUW38_17495;Dbxref=NCBI_GP:WJG80481.1;Name=WJG80481.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=PUW38_17495;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WJG80481.1;transl_table=11 CP118116.1 Genbank pseudogene 3594845 3596241 . - . ID=gene-PUW38_17500;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=pseudogene;locus_tag=PUW38_17500;pseudo=true CP118116.1 Protein Homology CDS 3594845 3596241 . - 0 ID=cds-PUW38_17500;Parent=gene-PUW38_17500;Note=frameshifted;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=PUW38_17500;product=two-component system sensor histidine kinase ZraS;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3596495 3596950 . + . ID=gene-PUW38_17505;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=PUW38_17505 CP118116.1 Protein Homology CDS 3596495 3596950 . + 0 ID=cds-WJG80482.1;Parent=gene-PUW38_17505;Dbxref=NCBI_GP:WJG80482.1;Name=WJG80482.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=PUW38_17505;product=zinc resistance sensor/chaperone ZraP;protein_id=WJG80482.1;transl_table=11 CP118116.1 Genbank gene 3596992 3597684 . - . ID=gene-PUW38_17510;Name=PUW38_17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17510 CP118116.1 Protein Homology CDS 3596992 3597684 . - 0 ID=cds-WJG80483.1;Parent=gene-PUW38_17510;Dbxref=NCBI_GP:WJG80483.1;Name=WJG80483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=PUW38_17510;product=DUF1481 domain-containing protein;protein_id=WJG80483.1;transl_table=11 CP118116.1 Genbank gene 3597696 3597968 . - . ID=gene-PUW38_17515;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=PUW38_17515 CP118116.1 Protein Homology CDS 3597696 3597968 . - 0 ID=cds-WJG80484.1;Parent=gene-PUW38_17515;Dbxref=NCBI_GP:WJG80484.1;Name=WJG80484.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=PUW38_17515;product=DNA-binding protein HU-alpha;protein_id=WJG80484.1;transl_table=11 CP118116.1 Genbank gene 3598155 3598745 . - . ID=gene-PUW38_17520;Name=PUW38_17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17520 CP118116.1 Protein Homology CDS 3598155 3598745 . - 0 ID=cds-WJG80485.1;Parent=gene-PUW38_17520;Dbxref=NCBI_GP:WJG80485.1;Name=WJG80485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=PUW38_17520;product=YjaG family protein;protein_id=WJG80485.1;transl_table=11 CP118116.1 Genbank gene 3598787 3599458 . - . ID=gene-PUW38_17525;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=PUW38_17525 CP118116.1 Protein Homology CDS 3598787 3599458 . - 0 ID=cds-WJG80486.1;Parent=gene-PUW38_17525;Dbxref=NCBI_GP:WJG80486.1;Name=WJG80486.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=PUW38_17525;product=deoxyribonuclease V;protein_id=WJG80486.1;transl_table=11 CP118116.1 Genbank gene 3599468 3600532 . - . ID=gene-PUW38_17530;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=PUW38_17530 CP118116.1 Protein Homology CDS 3599468 3600532 . - 0 ID=cds-WJG80487.1;Parent=gene-PUW38_17530;Dbxref=NCBI_GP:WJG80487.1;Name=WJG80487.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=PUW38_17530;product=uroporphyrinogen decarboxylase;protein_id=WJG80487.1;transl_table=11 CP118116.1 Genbank gene 3600573 3601346 . - . ID=gene-PUW38_17535;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=PUW38_17535 CP118116.1 Protein Homology CDS 3600573 3601346 . - 0 ID=cds-WJG80488.1;Parent=gene-PUW38_17535;Dbxref=NCBI_GP:WJG80488.1;Name=WJG80488.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=PUW38_17535;product=NAD(+) diphosphatase;protein_id=WJG80488.1;transl_table=11 CP118116.1 Genbank gene 3601439 3601927 . + . ID=gene-PUW38_17540;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=PUW38_17540 CP118116.1 Protein Homology CDS 3601439 3601927 . + 0 ID=cds-WJG80489.1;Parent=gene-PUW38_17540;Dbxref=NCBI_GP:WJG80489.1;Name=WJG80489.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=PUW38_17540;product=sigma D regulator;protein_id=WJG80489.1;transl_table=11 CP118116.1 cmsearch riboswitch 3602042 3602205 . + . ID=id-CP118116.1:3602042..3602205;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118116.1 Genbank gene 3602291 3604186 . + . ID=gene-PUW38_17545;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=PUW38_17545 CP118116.1 Protein Homology CDS 3602291 3604186 . + 0 ID=cds-WJG80490.1;Parent=gene-PUW38_17545;Dbxref=NCBI_GP:WJG80490.1;Name=WJG80490.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=PUW38_17545;product=phosphomethylpyrimidine synthase ThiC;protein_id=WJG80490.1;transl_table=11 CP118116.1 Genbank gene 3604186 3604821 . + . ID=gene-PUW38_17550;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=PUW38_17550 CP118116.1 Protein Homology CDS 3604186 3604821 . + 0 ID=cds-WJG80491.1;Parent=gene-PUW38_17550;Dbxref=NCBI_GP:WJG80491.1;Name=WJG80491.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=PUW38_17550;product=thiamine phosphate synthase;protein_id=WJG80491.1;transl_table=11 CP118116.1 Genbank pseudogene 3604814 3605571 . + . ID=gene-PUW38_17555;Name=PUW38_17555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17555;pseudo=true CP118116.1 Protein Homology CDS 3604814 3605571 . + 0 ID=cds-PUW38_17555;Parent=gene-PUW38_17555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=PUW38_17555;product=HesA/MoeB/ThiF family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3605552 3605752 . + . ID=gene-PUW38_17560;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=PUW38_17560 CP118116.1 Protein Homology CDS 3605552 3605752 . + 0 ID=cds-WJG80492.1;Parent=gene-PUW38_17560;Dbxref=NCBI_GP:WJG80492.1;Name=WJG80492.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=PUW38_17560;product=sulfur carrier protein ThiS;protein_id=WJG80492.1;transl_table=11 CP118116.1 Genbank gene 3605754 3606524 . + . ID=gene-PUW38_17565;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=PUW38_17565 CP118116.1 Protein Homology CDS 3605754 3606524 . + 0 ID=cds-WJG80493.1;Parent=gene-PUW38_17565;Dbxref=NCBI_GP:WJG80493.1;Name=WJG80493.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=PUW38_17565;product=thiazole synthase;protein_id=WJG80493.1;transl_table=11 CP118116.1 Genbank gene 3606521 3607654 . + . ID=gene-PUW38_17570;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=PUW38_17570 CP118116.1 Protein Homology CDS 3606521 3607654 . + 0 ID=cds-WJG80494.1;Parent=gene-PUW38_17570;Dbxref=NCBI_GP:WJG80494.1;Name=WJG80494.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=PUW38_17570;product=2-iminoacetate synthase ThiH;protein_id=WJG80494.1;transl_table=11 CP118116.1 Genbank gene 3607805 3607993 . - . ID=gene-PUW38_17575;Name=PUW38_17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17575 CP118116.1 Protein Homology CDS 3607805 3607993 . - 0 ID=cds-WJG80495.1;Parent=gene-PUW38_17575;Dbxref=NCBI_GP:WJG80495.1;Name=WJG80495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=PUW38_17575;product=hypothetical protein;protein_id=WJG80495.1;transl_table=11 CP118116.1 Genbank pseudogene 3608316 3609297 . - . ID=gene-PUW38_17580;Name=PUW38_17580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17580;pseudo=true CP118116.1 Protein Homology CDS 3608316 3609297 . - 0 ID=cds-PUW38_17580;Parent=gene-PUW38_17580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=PUW38_17580;product=type III secretion system effector arginine glycosyltransferase SseK1;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3609678 3610022 . + . ID=gene-PUW38_17585;Name=PUW38_17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17585 CP118116.1 Protein Homology CDS 3609678 3610022 . + 0 ID=cds-WJG80496.1;Parent=gene-PUW38_17585;Dbxref=NCBI_GP:WJG80496.1;Name=WJG80496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=PUW38_17585;product=cytoplasmic protein;protein_id=WJG80496.1;transl_table=11 CP118116.1 Genbank gene 3610028 3610351 . - . ID=gene-PUW38_17590;Name=PUW38_17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17590 CP118116.1 Protein Homology CDS 3610028 3610351 . - 0 ID=cds-WJG80497.1;Parent=gene-PUW38_17590;Dbxref=NCBI_GP:WJG80497.1;Name=WJG80497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463024.1;locus_tag=PUW38_17590;product=hypothetical protein;protein_id=WJG80497.1;transl_table=11 CP118116.1 Genbank gene 3610393 3614616 . - . ID=gene-PUW38_17595;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=PUW38_17595 CP118116.1 Protein Homology CDS 3610393 3614616 . - 0 ID=cds-WJG80498.1;Parent=gene-PUW38_17595;Dbxref=NCBI_GP:WJG80498.1;Name=WJG80498.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=PUW38_17595;product=DNA-directed RNA polymerase subunit beta';protein_id=WJG80498.1;transl_table=11 CP118116.1 Genbank pseudogene 3614693 3618720 . - . ID=gene-PUW38_17600;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=pseudogene;locus_tag=PUW38_17600;pseudo=true CP118116.1 Protein Homology CDS 3614693 3618720 . - 0 ID=cds-PUW38_17600;Parent=gene-PUW38_17600;Note=frameshifted;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=PUW38_17600;product=DNA-directed RNA polymerase subunit beta;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3619038 3619403 . - . ID=gene-PUW38_17605;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=PUW38_17605 CP118116.1 Protein Homology CDS 3619038 3619403 . - 0 ID=cds-WJG80499.1;Parent=gene-PUW38_17605;Dbxref=NCBI_GP:WJG80499.1;Name=WJG80499.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=PUW38_17605;product=50S ribosomal protein L7/L12;protein_id=WJG80499.1;transl_table=11 CP118116.1 Genbank gene 3619470 3619967 . - . ID=gene-PUW38_17610;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=PUW38_17610 CP118116.1 Protein Homology CDS 3619470 3619967 . - 0 ID=cds-WJG80500.1;Parent=gene-PUW38_17610;Dbxref=NCBI_GP:WJG80500.1;Name=WJG80500.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=PUW38_17610;product=50S ribosomal protein L10;protein_id=WJG80500.1;transl_table=11 CP118116.1 Genbank gene 3620383 3621087 . - . ID=gene-PUW38_17615;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=PUW38_17615 CP118116.1 Protein Homology CDS 3620383 3621087 . - 0 ID=cds-WJG80501.1;Parent=gene-PUW38_17615;Dbxref=NCBI_GP:WJG80501.1;Name=WJG80501.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=PUW38_17615;product=50S ribosomal protein L1;protein_id=WJG80501.1;transl_table=11 CP118116.1 Genbank pseudogene 3621091 3621518 . - . ID=gene-PUW38_17620;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=pseudogene;locus_tag=PUW38_17620;pseudo=true CP118116.1 Protein Homology CDS 3621091 3621518 . - 0 ID=cds-PUW38_17620;Parent=gene-PUW38_17620;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=PUW38_17620;product=50S ribosomal protein L11;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3621676 3622221 . - . ID=gene-PUW38_17625;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=PUW38_17625 CP118116.1 Protein Homology CDS 3621676 3622221 . - 0 ID=cds-WJG80502.1;Parent=gene-PUW38_17625;Dbxref=NCBI_GP:WJG80502.1;Name=WJG80502.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=PUW38_17625;product=transcription termination/antitermination protein NusG;protein_id=WJG80502.1;transl_table=11 CP118116.1 Genbank gene 3622223 3622606 . - . ID=gene-PUW38_17630;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=PUW38_17630 CP118116.1 Protein Homology CDS 3622223 3622606 . - 0 ID=cds-WJG80503.1;Parent=gene-PUW38_17630;Dbxref=NCBI_GP:WJG80503.1;Name=WJG80503.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=PUW38_17630;product=preprotein translocase subunit SecE;protein_id=WJG80503.1;transl_table=11 CP118116.1 Genbank gene 3622836 3624020 . - . ID=gene-PUW38_17635;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PUW38_17635 CP118116.1 Protein Homology CDS 3622836 3624020 . - 0 ID=cds-WJG80504.1;Parent=gene-PUW38_17635;Dbxref=NCBI_GP:WJG80504.1;Name=WJG80504.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PUW38_17635;product=elongation factor Tu;protein_id=WJG80504.1;transl_table=11 CP118116.1 Genbank gene 3624136 3624211 . - . ID=gene-PUW38_17640;Name=PUW38_17640;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17640 CP118116.1 tRNAscan-SE tRNA 3624136 3624211 . - . ID=rna-PUW38_17640;Parent=gene-PUW38_17640;anticodon=(pos:complement(3624176..3624178));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17640;product=tRNA-Thr CP118116.1 tRNAscan-SE exon 3624136 3624211 . - . ID=exon-PUW38_17640-1;Parent=rna-PUW38_17640;anticodon=(pos:complement(3624176..3624178));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17640;product=tRNA-Thr CP118116.1 Genbank gene 3624218 3624292 . - . ID=gene-PUW38_17645;Name=PUW38_17645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17645 CP118116.1 tRNAscan-SE tRNA 3624218 3624292 . - . ID=rna-PUW38_17645;Parent=gene-PUW38_17645;anticodon=(pos:complement(3624257..3624259));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17645;product=tRNA-Gly CP118116.1 tRNAscan-SE exon 3624218 3624292 . - . ID=exon-PUW38_17645-1;Parent=rna-PUW38_17645;anticodon=(pos:complement(3624257..3624259));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17645;product=tRNA-Gly CP118116.1 Genbank gene 3624409 3624493 . - . ID=gene-PUW38_17650;Name=PUW38_17650;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17650 CP118116.1 tRNAscan-SE tRNA 3624409 3624493 . - . ID=rna-PUW38_17650;Parent=gene-PUW38_17650;anticodon=(pos:complement(3624457..3624459));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17650;product=tRNA-Tyr CP118116.1 tRNAscan-SE exon 3624409 3624493 . - . ID=exon-PUW38_17650-1;Parent=rna-PUW38_17650;anticodon=(pos:complement(3624457..3624459));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17650;product=tRNA-Tyr CP118116.1 Genbank gene 3624502 3624577 . - . ID=gene-PUW38_17655;Name=PUW38_17655;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17655 CP118116.1 tRNAscan-SE tRNA 3624502 3624577 . - . ID=rna-PUW38_17655;Parent=gene-PUW38_17655;anticodon=(pos:complement(3624542..3624544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17655;product=tRNA-Thr CP118116.1 tRNAscan-SE exon 3624502 3624577 . - . ID=exon-PUW38_17655-1;Parent=rna-PUW38_17655;anticodon=(pos:complement(3624542..3624544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17655;product=tRNA-Thr CP118116.1 Genbank gene 3624597 3624770 . + . ID=gene-PUW38_17660;Name=PUW38_17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17660 CP118116.1 Protein Homology CDS 3624597 3624770 . + 0 ID=cds-WJG80505.1;Parent=gene-PUW38_17660;Dbxref=NCBI_GP:WJG80505.1;Name=WJG80505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=PUW38_17660;product=hypothetical protein;protein_id=WJG80505.1;transl_table=11 CP118116.1 Genbank gene 3624979 3625929 . + . ID=gene-PUW38_17665;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=PUW38_17665 CP118116.1 Protein Homology CDS 3624979 3625929 . + 0 ID=cds-WJG80506.1;Parent=gene-PUW38_17665;Dbxref=NCBI_GP:WJG80506.1;Name=WJG80506.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=PUW38_17665;product=type I pantothenate kinase;protein_id=WJG80506.1;transl_table=11 CP118116.1 Genbank gene 3625964 3626926 . - . ID=gene-PUW38_17670;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=PUW38_17670 CP118116.1 Protein Homology CDS 3625964 3626926 . - 0 ID=cds-WJG80507.1;Parent=gene-PUW38_17670;Dbxref=NCBI_GP:WJG80507.1;Name=WJG80507.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=PUW38_17670;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WJG80507.1;transl_table=11 CP118116.1 Genbank gene 3626923 3627951 . - . ID=gene-PUW38_17675;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=PUW38_17675 CP118116.1 Protein Homology CDS 3626923 3627951 . - 0 ID=cds-WJG80508.1;Parent=gene-PUW38_17675;Dbxref=NCBI_GP:WJG80508.1;Name=WJG80508.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=PUW38_17675;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WJG80508.1;transl_table=11 CP118116.1 Genbank gene 3628133 3628248 . - . ID=gene-PUW38_17680;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW38_17680 CP118116.1 cmsearch rRNA 3628133 3628248 . - . ID=rna-PUW38_17680;Parent=gene-PUW38_17680;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17680;product=5S ribosomal RNA CP118116.1 cmsearch exon 3628133 3628248 . - . ID=exon-PUW38_17680-1;Parent=rna-PUW38_17680;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17680;product=5S ribosomal RNA CP118116.1 Genbank gene 3628445 3631433 . - . ID=gene-PUW38_17685;Name=PUW38_17685;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_17685 CP118116.1 cmsearch rRNA 3628445 3631433 . - . ID=rna-PUW38_17685;Parent=gene-PUW38_17685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17685;product=23S ribosomal RNA CP118116.1 cmsearch exon 3628445 3631433 . - . ID=exon-PUW38_17685-1;Parent=rna-PUW38_17685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17685;product=23S ribosomal RNA CP118116.1 Genbank gene 3631627 3631702 . - . ID=gene-PUW38_17690;Name=PUW38_17690;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17690 CP118116.1 tRNAscan-SE tRNA 3631627 3631702 . - . ID=rna-PUW38_17690;Parent=gene-PUW38_17690;anticodon=(pos:complement(3631666..3631668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17690;product=tRNA-Glu CP118116.1 tRNAscan-SE exon 3631627 3631702 . - . ID=exon-PUW38_17690-1;Parent=rna-PUW38_17690;anticodon=(pos:complement(3631666..3631668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17690;product=tRNA-Glu CP118116.1 Genbank gene 3631788 3633329 . - . ID=gene-PUW38_17695;Name=PUW38_17695;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_17695 CP118116.1 cmsearch rRNA 3631788 3633329 . - . ID=rna-PUW38_17695;Parent=gene-PUW38_17695;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17695;product=16S ribosomal RNA CP118116.1 cmsearch exon 3631788 3633329 . - . ID=exon-PUW38_17695-1;Parent=rna-PUW38_17695;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_17695;product=16S ribosomal RNA CP118116.1 Genbank gene 3633707 3634252 . - . ID=gene-PUW38_17700;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=PUW38_17700 CP118116.1 Protein Homology CDS 3633707 3634252 . - 0 ID=cds-WJG80509.1;Parent=gene-PUW38_17700;Dbxref=NCBI_GP:WJG80509.1;Name=WJG80509.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=PUW38_17700;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WJG80509.1;transl_table=11 CP118116.1 Genbank gene 3634264 3635715 . - . ID=gene-PUW38_17705;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=PUW38_17705 CP118116.1 Protein Homology CDS 3634264 3635715 . - 0 ID=cds-WJG80510.1;Parent=gene-PUW38_17705;Dbxref=NCBI_GP:WJG80510.1;Name=WJG80510.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=PUW38_17705;product=Trk system potassium transporter TrkH;protein_id=WJG80510.1;transl_table=11 CP118116.1 Genbank gene 3635754 3636368 . - . ID=gene-PUW38_17710;Name=PUW38_17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17710 CP118116.1 Protein Homology CDS 3635754 3636368 . - 0 ID=cds-WJG80511.1;Parent=gene-PUW38_17710;Dbxref=NCBI_GP:WJG80511.1;Name=WJG80511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=PUW38_17710;product=IMPACT family protein;protein_id=WJG80511.1;transl_table=11 CP118116.1 Genbank gene 3636368 3637699 . - . ID=gene-PUW38_17715;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=PUW38_17715 CP118116.1 Protein Homology CDS 3636368 3637699 . - 0 ID=cds-WJG80512.1;Parent=gene-PUW38_17715;Dbxref=NCBI_GP:WJG80512.1;Name=WJG80512.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=PUW38_17715;product=Xaa-Pro dipeptidase;protein_id=WJG80512.1;transl_table=11 CP118116.1 Genbank pseudogene 3637873 3640061 . + . ID=gene-PUW38_17720;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=pseudogene;locus_tag=PUW38_17720;pseudo=true CP118116.1 Protein Homology CDS 3637873 3640061 . + 0 ID=cds-PUW38_17720;Parent=gene-PUW38_17720;Note=frameshifted;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=PUW38_17720;product=fatty acid oxidation complex subunit alpha FadB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3640071 3641234 . + . ID=gene-PUW38_17725;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=PUW38_17725 CP118116.1 Protein Homology CDS 3640071 3641234 . + 0 ID=cds-WJG80513.1;Parent=gene-PUW38_17725;Dbxref=NCBI_GP:WJG80513.1;Name=WJG80513.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=PUW38_17725;product=acetyl-CoA C-acyltransferase FadA;protein_id=WJG80513.1;transl_table=11 CP118116.1 Genbank gene 3641431 3643254 . - . ID=gene-PUW38_17730;Name=PUW38_17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17730 CP118116.1 Protein Homology CDS 3641431 3643254 . - 0 ID=cds-WJG80514.1;Parent=gene-PUW38_17730;Dbxref=NCBI_GP:WJG80514.1;Name=WJG80514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=PUW38_17730;product=aryl-sulfate sulfotransferase;protein_id=WJG80514.1;transl_table=11 CP118116.1 Genbank gene 3643507 3644208 . - . ID=gene-PUW38_17735;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=PUW38_17735 CP118116.1 Protein Homology CDS 3643507 3644208 . - 0 ID=cds-WJG80515.1;Parent=gene-PUW38_17735;Dbxref=NCBI_GP:WJG80515.1;Name=WJG80515.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=PUW38_17735;product=NAD(P)H-flavin reductase;protein_id=WJG80515.1;transl_table=11 CP118116.1 Genbank gene 3644294 3645772 . - . ID=gene-PUW38_17740;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=PUW38_17740 CP118116.1 Protein Homology CDS 3644294 3645772 . - 0 ID=cds-WJG80516.1;Parent=gene-PUW38_17740;Dbxref=NCBI_GP:WJG80516.1;Name=WJG80516.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=PUW38_17740;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WJG80516.1;transl_table=11 CP118116.1 Genbank gene 3645958 3646446 . + . ID=gene-PUW38_17745;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=PUW38_17745 CP118116.1 Protein Homology CDS 3645958 3646446 . + 0 ID=cds-WJG80517.1;Parent=gene-PUW38_17745;Dbxref=NCBI_GP:WJG80517.1;Name=WJG80517.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=PUW38_17745;product=transcription/translation regulatory transformer protein RfaH;protein_id=WJG80517.1;transl_table=11 CP118116.1 Genbank gene 3646454 3647236 . - . ID=gene-PUW38_17750;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=PUW38_17750 CP118116.1 Protein Homology CDS 3646454 3647236 . - 0 ID=cds-WJG80518.1;Parent=gene-PUW38_17750;Dbxref=NCBI_GP:WJG80518.1;Name=WJG80518.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=PUW38_17750;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WJG80518.1;transl_table=11 CP118116.1 Genbank gene 3647278 3648057 . - . ID=gene-PUW38_17755;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=PUW38_17755 CP118116.1 Protein Homology CDS 3647278 3648057 . - 0 ID=cds-WJG80519.1;Parent=gene-PUW38_17755;Dbxref=NCBI_GP:WJG80519.1;Name=WJG80519.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=PUW38_17755;product=Sec-independent protein translocase subunit TatC;protein_id=WJG80519.1;transl_table=11 CP118116.1 Genbank gene 3648060 3648608 . - . ID=gene-PUW38_17760;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=PUW38_17760 CP118116.1 Protein Homology CDS 3648060 3648608 . - 0 ID=cds-WJG80520.1;Parent=gene-PUW38_17760;Dbxref=NCBI_GP:WJG80520.1;Name=WJG80520.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=PUW38_17760;product=Sec-independent protein translocase protein TatB;protein_id=WJG80520.1;transl_table=11 CP118116.1 Genbank gene 3648612 3648866 . - . ID=gene-PUW38_17765;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=PUW38_17765 CP118116.1 Protein Homology CDS 3648612 3648866 . - 0 ID=cds-WJG80521.1;Parent=gene-PUW38_17765;Dbxref=NCBI_GP:WJG80521.1;Name=WJG80521.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=PUW38_17765;product=Sec-independent protein translocase subunit TatA;protein_id=WJG80521.1;transl_table=11 CP118116.1 Genbank gene 3649072 3650712 . - . ID=gene-PUW38_17770;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=PUW38_17770 CP118116.1 Protein Homology CDS 3649072 3650712 . - 0 ID=cds-WJG80522.1;Parent=gene-PUW38_17770;Dbxref=NCBI_GP:WJG80522.1;Name=WJG80522.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=PUW38_17770;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WJG80522.1;transl_table=11 CP118116.1 Genbank gene 3650709 3651314 . - . ID=gene-PUW38_17775;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=PUW38_17775 CP118116.1 Protein Homology CDS 3650709 3651314 . - 0 ID=cds-WJG80523.1;Parent=gene-PUW38_17775;Dbxref=NCBI_GP:WJG80523.1;Name=WJG80523.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=PUW38_17775;product=ubiquinone biosynthesis protein UbiJ;protein_id=WJG80523.1;transl_table=11 CP118116.1 Genbank gene 3651324 3652079 . - . ID=gene-PUW38_17780;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=PUW38_17780 CP118116.1 Protein Homology CDS 3651324 3652079 . - 0 ID=cds-WJG80524.1;Parent=gene-PUW38_17780;Dbxref=NCBI_GP:WJG80524.1;Name=WJG80524.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=PUW38_17780;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WJG80524.1;transl_table=11 CP118116.1 Genbank gene 3652175 3653605 . - . ID=gene-PUW38_17785;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=PUW38_17785 CP118116.1 Protein Homology CDS 3652175 3653605 . - 0 ID=cds-WJG80525.1;Parent=gene-PUW38_17785;Dbxref=NCBI_GP:WJG80525.1;Name=WJG80525.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=PUW38_17785;product=DNA recombination protein RmuC;protein_id=WJG80525.1;transl_table=11 CP118116.1 Genbank gene 3653745 3654506 . - . ID=gene-PUW38_17790;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=PUW38_17790 CP118116.1 Protein Homology CDS 3653745 3654506 . - 0 ID=cds-WJG80526.1;Parent=gene-PUW38_17790;Dbxref=NCBI_GP:WJG80526.1;Name=WJG80526.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=PUW38_17790;product=uridine phosphorylase;protein_id=WJG80526.1;transl_table=11 CP118116.1 Genbank gene 3654765 3655577 . + . ID=gene-PUW38_17795;Name=PUW38_17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17795 CP118116.1 Protein Homology CDS 3654765 3655577 . + 0 ID=cds-WJG80527.1;Parent=gene-PUW38_17795;Dbxref=NCBI_GP:WJG80527.1;Name=WJG80527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=PUW38_17795;product=dienelactone hydrolase family protein;protein_id=WJG80527.1;transl_table=11 CP118116.1 Genbank gene 3655657 3657000 . - . ID=gene-PUW38_17800;Name=PUW38_17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17800 CP118116.1 Protein Homology CDS 3655657 3657000 . - 0 ID=cds-WJG80528.1;Parent=gene-PUW38_17800;Dbxref=NCBI_GP:WJG80528.1;Name=WJG80528.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=PUW38_17800;product=anaerobic sulfatase maturase;protein_id=WJG80528.1;transl_table=11 CP118116.1 Genbank pseudogene 3657344 3659607 . - . ID=gene-PUW38_17805;Name=metE;gbkey=Gene;gene=metE;gene_biotype=pseudogene;locus_tag=PUW38_17805;pseudo=true CP118116.1 Protein Homology CDS 3657344 3659607 . - 0 ID=cds-PUW38_17805;Parent=gene-PUW38_17805;Note=frameshifted;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=PUW38_17805;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3659856 3660809 . + . ID=gene-PUW38_17810;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=PUW38_17810 CP118116.1 Protein Homology CDS 3659856 3660809 . + 0 ID=cds-WJG80529.1;Parent=gene-PUW38_17810;Dbxref=NCBI_GP:WJG80529.1;Name=WJG80529.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=PUW38_17810;product=HTH-type transcriptional regulator MetR;protein_id=WJG80529.1;transl_table=11 CP118116.1 Genbank gene 3660697 3661596 . - . ID=gene-PUW38_17815;Name=PUW38_17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17815 CP118116.1 Protein Homology CDS 3660697 3661596 . - 0 ID=cds-WJG80530.1;Parent=gene-PUW38_17815;Dbxref=NCBI_GP:WJG80530.1;Name=WJG80530.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=PUW38_17815;product=carboxylate/amino acid/amine transporter;protein_id=WJG80530.1;transl_table=11 CP118116.1 Genbank gene 3661677 3662477 . - . ID=gene-PUW38_17820;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=PUW38_17820 CP118116.1 Protein Homology CDS 3661677 3662477 . - 0 ID=cds-WJG80531.1;Parent=gene-PUW38_17820;Dbxref=NCBI_GP:WJG80531.1;Name=WJG80531.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=PUW38_17820;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WJG80531.1;transl_table=11 CP118116.1 Genbank gene 3662493 3663509 . - . ID=gene-PUW38_17825;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=PUW38_17825 CP118116.1 Protein Homology CDS 3662493 3663509 . - 0 ID=cds-WJG80532.1;Parent=gene-PUW38_17825;Dbxref=NCBI_GP:WJG80532.1;Name=WJG80532.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=PUW38_17825;product=lysophospholipase L2;protein_id=WJG80532.1;transl_table=11 CP118116.1 Genbank gene 3663620 3664210 . + . ID=gene-PUW38_17830;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=PUW38_17830 CP118116.1 Protein Homology CDS 3663620 3664210 . + 0 ID=cds-WJG80533.1;Parent=gene-PUW38_17830;Dbxref=NCBI_GP:WJG80533.1;Name=WJG80533.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576440.1;locus_tag=PUW38_17830;product=homoserine/homoserine lactone efflux protein;protein_id=WJG80533.1;transl_table=11 CP118116.1 Genbank gene 3664234 3664854 . - . ID=gene-PUW38_17835;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=PUW38_17835 CP118116.1 Protein Homology CDS 3664234 3664854 . - 0 ID=cds-WJG80534.1;Parent=gene-PUW38_17835;Dbxref=NCBI_GP:WJG80534.1;Name=WJG80534.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=PUW38_17835;product=threonine export protein RhtC;protein_id=WJG80534.1;transl_table=11 CP118116.1 Genbank gene 3664918 3666747 . - . ID=gene-PUW38_17840;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=PUW38_17840 CP118116.1 Protein Homology CDS 3664918 3666747 . - 0 ID=cds-WJG83276.1;Parent=gene-PUW38_17840;Dbxref=NCBI_GP:WJG83276.1;Name=WJG83276.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=PUW38_17840;product=ATP-dependent DNA helicase RecQ;protein_id=WJG83276.1;transl_table=11 CP118116.1 Genbank pseudogene 3666831 3667699 . - . ID=gene-PUW38_17845;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=pseudogene;locus_tag=PUW38_17845;pseudo=true CP118116.1 Protein Homology CDS 3666831 3667699 . - 0 ID=cds-PUW38_17845;Parent=gene-PUW38_17845;Note=frameshifted;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=PUW38_17845;product=phospholipase A;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3667864 3668331 . + . ID=gene-PUW38_17850;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=PUW38_17850 CP118116.1 Protein Homology CDS 3667864 3668331 . + 0 ID=cds-WJG80535.1;Parent=gene-PUW38_17850;Dbxref=NCBI_GP:WJG80535.1;Name=WJG80535.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=PUW38_17850;product=acyl-CoA thioesterase YigI;protein_id=WJG80535.1;transl_table=11 CP118116.1 Genbank gene 3668375 3669262 . + . ID=gene-PUW38_17855;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PUW38_17855 CP118116.1 Protein Homology CDS 3668375 3669262 . + 0 ID=cds-WJG83277.1;Parent=gene-PUW38_17855;Dbxref=NCBI_GP:WJG83277.1;Name=WJG83277.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=PUW38_17855;product=EamA family transporter RarD;protein_id=WJG83277.1;transl_table=11 CP118116.1 Genbank gene 3669302 3669598 . - . ID=gene-PUW38_17860;Name=PUW38_17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17860 CP118116.1 Protein Homology CDS 3669302 3669598 . - 0 ID=cds-WJG80536.1;Parent=gene-PUW38_17860;Dbxref=NCBI_GP:WJG80536.1;Name=WJG80536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=PUW38_17860;product=hypothetical protein;protein_id=WJG80536.1;transl_table=11 CP118116.1 Genbank gene 3669680 3670153 . + . ID=gene-PUW38_17865;Name=PUW38_17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17865 CP118116.1 Protein Homology CDS 3669680 3670153 . + 0 ID=cds-WJG80537.1;Parent=gene-PUW38_17865;Dbxref=NCBI_GP:WJG80537.1;Name=WJG80537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751908.1;locus_tag=PUW38_17865;product=hypothetical protein;protein_id=WJG80537.1;transl_table=11 CP118116.1 Genbank gene 3670201 3671151 . - . ID=gene-PUW38_17870;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=PUW38_17870 CP118116.1 Protein Homology CDS 3670201 3671151 . - 0 ID=cds-WJG80538.1;Parent=gene-PUW38_17870;Dbxref=NCBI_GP:WJG80538.1;Name=WJG80538.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=PUW38_17870;product=magnesium/cobalt transporter CorA;protein_id=WJG80538.1;transl_table=11 CP118116.1 Genbank gene 3671307 3671363 . - . ID=gene-PUW38_17875;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=PUW38_17875 CP118116.1 Protein Homology CDS 3671307 3671363 . - 0 ID=cds-WJG83278.1;Parent=gene-PUW38_17875;Dbxref=NCBI_GP:WJG83278.1;Name=WJG83278.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=PUW38_17875;product=protein YsgD;protein_id=WJG83278.1;transl_table=11 CP118116.1 Genbank gene 3671623 3673785 . - . ID=gene-PUW38_17880;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=PUW38_17880 CP118116.1 Protein Homology CDS 3671623 3673785 . - 0 ID=cds-WJG80539.1;Parent=gene-PUW38_17880;Dbxref=NCBI_GP:WJG80539.1;Name=WJG80539.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=PUW38_17880;product=DNA helicase II;protein_id=WJG80539.1;transl_table=11 CP118116.1 Genbank gene 3673921 3674637 . - . ID=gene-PUW38_17885;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=PUW38_17885 CP118116.1 Protein Homology CDS 3673921 3674637 . - 0 ID=cds-WJG80540.1;Parent=gene-PUW38_17885;Dbxref=NCBI_GP:WJG80540.1;Name=WJG80540.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=PUW38_17885;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WJG80540.1;transl_table=11 CP118116.1 Genbank gene 3674637 3675539 . - . ID=gene-PUW38_17890;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=PUW38_17890 CP118116.1 Protein Homology CDS 3674637 3675539 . - 0 ID=cds-WJG80541.1;Parent=gene-PUW38_17890;Dbxref=NCBI_GP:WJG80541.1;Name=WJG80541.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=PUW38_17890;product=tyrosine recombinase XerC;protein_id=WJG80541.1;transl_table=11 CP118116.1 Genbank gene 3675536 3676243 . - . ID=gene-PUW38_17895;Name=PUW38_17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17895 CP118116.1 Protein Homology CDS 3675536 3676243 . - 0 ID=cds-WJG80542.1;Parent=gene-PUW38_17895;Dbxref=NCBI_GP:WJG80542.1;Name=WJG80542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=PUW38_17895;product=DUF484 domain-containing protein;protein_id=WJG80542.1;transl_table=11 CP118116.1 Genbank gene 3676240 3677064 . - . ID=gene-PUW38_17900;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=PUW38_17900 CP118116.1 Protein Homology CDS 3676240 3677064 . - 0 ID=cds-WJG83279.1;Parent=gene-PUW38_17900;Dbxref=NCBI_GP:WJG83279.1;Name=WJG83279.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=PUW38_17900;product=diaminopimelate epimerase;protein_id=WJG83279.1;transl_table=11 CP118116.1 Genbank gene 3677101 3677304 . - . ID=gene-PUW38_17905;Name=PUW38_17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17905 CP118116.1 Protein Homology CDS 3677101 3677304 . - 0 ID=cds-WJG80543.1;Parent=gene-PUW38_17905;Dbxref=NCBI_GP:WJG80543.1;Name=WJG80543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=PUW38_17905;product=lipoprotein;protein_id=WJG80543.1;transl_table=11 CP118116.1 Genbank gene 3677490 3677741 . + . ID=gene-PUW38_17910;Name=PUW38_17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17910 CP118116.1 GeneMarkS-2+ CDS 3677490 3677741 . + 0 ID=cds-WJG80544.1;Parent=gene-PUW38_17910;Dbxref=NCBI_GP:WJG80544.1;Name=WJG80544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_17910;product=hypothetical protein;protein_id=WJG80544.1;transl_table=11 CP118116.1 Genbank pseudogene 3677717 3678013 . + . ID=gene-PUW38_17915;Name=PUW38_17915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17915;pseudo=true CP118116.1 Protein Homology CDS 3677717 3678013 . + 0 ID=cds-PUW38_17915;Parent=gene-PUW38_17915;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604297.1;locus_tag=PUW38_17915;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3678001 3678390 . + . ID=gene-PUW38_17920;Name=PUW38_17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17920 CP118116.1 Protein Homology CDS 3678001 3678390 . + 0 ID=cds-WJG80545.1;Parent=gene-PUW38_17920;Dbxref=NCBI_GP:WJG80545.1;Name=WJG80545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=PUW38_17920;product=DUF3021 family protein;protein_id=WJG80545.1;transl_table=11 CP118116.1 Genbank gene 3678460 3678780 . + . ID=gene-PUW38_17925;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=PUW38_17925 CP118116.1 Protein Homology CDS 3678460 3678780 . + 0 ID=cds-WJG80546.1;Parent=gene-PUW38_17925;Dbxref=NCBI_GP:WJG80546.1;Name=WJG80546.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=PUW38_17925;product=iron donor protein CyaY;protein_id=WJG80546.1;transl_table=11 CP118116.1 Genbank gene 3678858 3681404 . - . ID=gene-PUW38_17930;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=PUW38_17930 CP118116.1 Protein Homology CDS 3678858 3681404 . - 0 ID=cds-WJG80547.1;Parent=gene-PUW38_17930;Dbxref=NCBI_GP:WJG80547.1;Name=WJG80547.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=PUW38_17930;product=class I adenylate cyclase;protein_id=WJG80547.1;transl_table=11 CP118116.1 Genbank gene 3681781 3682722 . + . ID=gene-PUW38_17935;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=PUW38_17935 CP118116.1 Protein Homology CDS 3681781 3682722 . + 0 ID=cds-WJG80548.1;Parent=gene-PUW38_17935;Dbxref=NCBI_GP:WJG80548.1;Name=WJG80548.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=PUW38_17935;product=hydroxymethylbilane synthase;protein_id=WJG80548.1;transl_table=11 CP118116.1 Genbank gene 3682719 3683459 . + . ID=gene-PUW38_17940;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=PUW38_17940 CP118116.1 Protein Homology CDS 3682719 3683459 . + 0 ID=cds-WJG80549.1;Parent=gene-PUW38_17940;Dbxref=NCBI_GP:WJG80549.1;Name=WJG80549.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=PUW38_17940;product=uroporphyrinogen-III synthase;protein_id=WJG80549.1;transl_table=11 CP118116.1 Genbank gene 3683481 3684620 . + . ID=gene-PUW38_17945;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=PUW38_17945 CP118116.1 Protein Homology CDS 3683481 3684620 . + 0 ID=cds-WJG80550.1;Parent=gene-PUW38_17945;Dbxref=NCBI_GP:WJG80550.1;Name=WJG80550.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138965.1;locus_tag=PUW38_17945;product=uroporphyrinogen-III C-methyltransferase;protein_id=WJG80550.1;transl_table=11 CP118116.1 Genbank pseudogene 3684623 3685818 . + . ID=gene-PUW38_17950;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=pseudogene;locus_tag=PUW38_17950;pseudo=true CP118116.1 Protein Homology CDS 3684623 3685818 . + 0 ID=cds-PUW38_17950;Parent=gene-PUW38_17950;Note=frameshifted;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=PUW38_17950;product=protoheme IX biogenesis protein HemY;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3686401 3686477 . - . ID=gene-PUW38_17955;Name=PUW38_17955;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17955 CP118116.1 tRNAscan-SE tRNA 3686401 3686477 . - . ID=rna-PUW38_17955;Parent=gene-PUW38_17955;anticodon=(pos:complement(3686441..3686443));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17955;product=tRNA-Pro CP118116.1 tRNAscan-SE exon 3686401 3686477 . - . ID=exon-PUW38_17955-1;Parent=rna-PUW38_17955;anticodon=(pos:complement(3686441..3686443));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17955;product=tRNA-Pro CP118116.1 Genbank gene 3686520 3686606 . - . ID=gene-PUW38_17960;Name=PUW38_17960;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17960 CP118116.1 tRNAscan-SE tRNA 3686520 3686606 . - . ID=rna-PUW38_17960;Parent=gene-PUW38_17960;anticodon=(pos:complement(3686570..3686572));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17960;product=tRNA-Leu CP118116.1 tRNAscan-SE exon 3686520 3686606 . - . ID=exon-PUW38_17960-1;Parent=rna-PUW38_17960;anticodon=(pos:complement(3686570..3686572));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17960;product=tRNA-Leu CP118116.1 Genbank gene 3686627 3686702 . - . ID=gene-PUW38_17965;Name=PUW38_17965;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17965 CP118116.1 tRNAscan-SE tRNA 3686627 3686702 . - . ID=rna-PUW38_17965;Parent=gene-PUW38_17965;anticodon=(pos:complement(3686667..3686669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17965;product=tRNA-His CP118116.1 tRNAscan-SE exon 3686627 3686702 . - . ID=exon-PUW38_17965-1;Parent=rna-PUW38_17965;anticodon=(pos:complement(3686667..3686669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17965;product=tRNA-His CP118116.1 Genbank gene 3686757 3686833 . - . ID=gene-PUW38_17970;Name=PUW38_17970;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_17970 CP118116.1 tRNAscan-SE tRNA 3686757 3686833 . - . ID=rna-PUW38_17970;Parent=gene-PUW38_17970;anticodon=(pos:complement(3686797..3686799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17970;product=tRNA-Arg CP118116.1 tRNAscan-SE exon 3686757 3686833 . - . ID=exon-PUW38_17970-1;Parent=rna-PUW38_17970;anticodon=(pos:complement(3686797..3686799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_17970;product=tRNA-Arg CP118116.1 Genbank pseudogene 3686936 3688320 . - . ID=gene-PUW38_17975;Name=PUW38_17975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_17975;pseudo=true CP118116.1 Protein Homology CDS 3686936 3688320 . - 0 ID=cds-PUW38_17975;Parent=gene-PUW38_17975;Note=frameshifted;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=PUW38_17975;product=amino acid permease;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3688527 3689267 . - . ID=gene-PUW38_17980;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=PUW38_17980 CP118116.1 Protein Homology CDS 3688527 3689267 . - 0 ID=cds-WJG80551.1;Parent=gene-PUW38_17980;Dbxref=NCBI_GP:WJG80551.1;Name=WJG80551.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=PUW38_17980;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WJG80551.1;transl_table=11 CP118116.1 Genbank gene 3689264 3690622 . - . ID=gene-PUW38_17985;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=PUW38_17985 CP118116.1 Protein Homology CDS 3689264 3690622 . - 0 ID=cds-WJG80552.1;Parent=gene-PUW38_17985;Dbxref=NCBI_GP:WJG80552.1;Name=WJG80552.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=PUW38_17985;product=ECA oligosaccharide polymerase;protein_id=WJG80552.1;transl_table=11 CP118116.1 Genbank gene 3690619 3691698 . - . ID=gene-PUW38_17990;Name=PUW38_17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_17990 CP118116.1 Protein Homology CDS 3690619 3691698 . - 0 ID=cds-WJG80553.1;Parent=gene-PUW38_17990;Dbxref=NCBI_GP:WJG80553.1;Name=WJG80553.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=PUW38_17990;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WJG80553.1;transl_table=11 CP118116.1 Genbank gene 3691695 3692945 . - . ID=gene-PUW38_17995;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=PUW38_17995 CP118116.1 Protein Homology CDS 3691695 3692945 . - 0 ID=cds-WJG80554.1;Parent=gene-PUW38_17995;Dbxref=NCBI_GP:WJG80554.1;Name=WJG80554.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=PUW38_17995;product=lipid III flippase WzxE;protein_id=WJG80554.1;transl_table=11 CP118116.1 Genbank gene 3692947 3694077 . - . ID=gene-PUW38_18000;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=PUW38_18000 CP118116.1 Protein Homology CDS 3692947 3694077 . - 0 ID=cds-WJG80555.1;Parent=gene-PUW38_18000;Dbxref=NCBI_GP:WJG80555.1;Name=WJG80555.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=PUW38_18000;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WJG80555.1;transl_table=11 CP118116.1 Genbank gene 3694082 3694759 . - . ID=gene-PUW38_18005;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=PUW38_18005 CP118116.1 Protein Homology CDS 3694082 3694759 . - 0 ID=cds-WJG80556.1;Parent=gene-PUW38_18005;Dbxref=NCBI_GP:WJG80556.1;Name=WJG80556.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=PUW38_18005;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WJG80556.1;transl_table=11 CP118116.1 Genbank gene 3694737 3695051 . - . ID=gene-PUW38_18010;Name=PUW38_18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18010 CP118116.1 Protein Homology CDS 3694737 3695051 . - 0 ID=cds-WJG80557.1;Parent=gene-PUW38_18010;Dbxref=NCBI_GP:WJG80557.1;Name=WJG80557.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658205.1;locus_tag=PUW38_18010;product=sugar phosphate nucleotidyltransferase;protein_id=WJG80557.1;transl_table=11 CP118116.1 Genbank gene 3694994 3696061 . - . ID=gene-PUW38_18015;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=PUW38_18015 CP118116.1 Protein Homology CDS 3694994 3696061 . - 0 ID=cds-WJG80558.1;Parent=gene-PUW38_18015;Dbxref=NCBI_GP:WJG80558.1;Name=WJG80558.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=PUW38_18015;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WJG80558.1;transl_table=11 CP118116.1 Genbank gene 3696061 3697323 . - . ID=gene-PUW38_18020;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=PUW38_18020 CP118116.1 Protein Homology CDS 3696061 3697323 . - 0 ID=cds-WJG80559.1;Parent=gene-PUW38_18020;Dbxref=NCBI_GP:WJG80559.1;Name=WJG80559.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=PUW38_18020;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WJG80559.1;transl_table=11 CP118116.1 Genbank gene 3697320 3698450 . - . ID=gene-PUW38_18025;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=PUW38_18025 CP118116.1 Protein Homology CDS 3697320 3698450 . - 0 ID=cds-WJG80560.1;Parent=gene-PUW38_18025;Dbxref=NCBI_GP:WJG80560.1;Name=WJG80560.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=PUW38_18025;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WJG80560.1;transl_table=11 CP118116.1 Genbank gene 3698506 3699552 . - . ID=gene-PUW38_18030;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=PUW38_18030 CP118116.1 Protein Homology CDS 3698506 3699552 . - 0 ID=cds-WJG80561.1;Parent=gene-PUW38_18030;Dbxref=NCBI_GP:WJG80561.1;Name=WJG80561.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=PUW38_18030;product=ECA polysaccharide chain length modulation protein;protein_id=WJG80561.1;transl_table=11 CP118116.1 Genbank gene 3699564 3700667 . - . ID=gene-PUW38_18035;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=PUW38_18035 CP118116.1 Protein Homology CDS 3699564 3700667 . - 0 ID=cds-WJG80562.1;Parent=gene-PUW38_18035;Dbxref=NCBI_GP:WJG80562.1;Name=WJG80562.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=PUW38_18035;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WJG80562.1;transl_table=11 CP118116.1 Genbank gene 3700897 3702156 . - . ID=gene-PUW38_18040;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=PUW38_18040 CP118116.1 Protein Homology CDS 3700897 3702156 . - 0 ID=cds-WJG80563.1;Parent=gene-PUW38_18040;Dbxref=NCBI_GP:WJG80563.1;Name=WJG80563.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=PUW38_18040;product=transcription termination factor Rho;protein_id=WJG80563.1;transl_table=11 CP118116.1 Genbank gene 3702244 3702327 . - . ID=gene-PUW38_18045;Name=PUW38_18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18045 CP118116.1 Protein Homology CDS 3702244 3702327 . - 0 ID=cds-WJG83280.1;Parent=gene-PUW38_18045;Dbxref=NCBI_GP:WJG83280.1;Name=WJG83280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=PUW38_18045;product=rho operon leader peptide;protein_id=WJG83280.1;transl_table=11 CP118116.1 Genbank gene 3702575 3702904 . - . ID=gene-PUW38_18050;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PUW38_18050 CP118116.1 Protein Homology CDS 3702575 3702904 . - 0 ID=cds-WJG80564.1;Parent=gene-PUW38_18050;Dbxref=NCBI_GP:WJG80564.1;Name=WJG80564.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=PUW38_18050;product=thioredoxin TrxA;protein_id=WJG80564.1;transl_table=11 CP118116.1 Genbank gene 3703048 3704313 . + . ID=gene-PUW38_18055;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=PUW38_18055 CP118116.1 Protein Homology CDS 3703048 3704313 . + 0 ID=cds-WJG80565.1;Parent=gene-PUW38_18055;Dbxref=NCBI_GP:WJG80565.1;Name=WJG80565.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=PUW38_18055;product=ATP-dependent RNA helicase RhlB;protein_id=WJG80565.1;transl_table=11 CP118116.1 Genbank gene 3704450 3705931 . + . ID=gene-PUW38_18060;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=PUW38_18060 CP118116.1 Protein Homology CDS 3704450 3705931 . + 0 ID=cds-WJG80566.1;Parent=gene-PUW38_18060;Dbxref=NCBI_GP:WJG80566.1;Name=WJG80566.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=PUW38_18060;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WJG80566.1;transl_table=11 CP118116.1 Genbank gene 3705971 3707995 . - . ID=gene-PUW38_18065;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=PUW38_18065 CP118116.1 Protein Homology CDS 3705971 3707995 . - 0 ID=cds-WJG80567.1;Parent=gene-PUW38_18065;Dbxref=NCBI_GP:WJG80567.1;Name=WJG80567.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=PUW38_18065;product=DNA helicase Rep;protein_id=WJG80567.1;transl_table=11 CP118116.1 Genbank pseudogene 3708095 3708247 . - . ID=gene-PUW38_18070;Name=PUW38_18070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18070;pseudo=true CP118116.1 Protein Homology CDS 3708095 3708247 . - 0 ID=cds-PUW38_18070;Parent=gene-PUW38_18070;Note=involved in nicotinamide riboside transport%3B frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=PUW38_18070;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3708533 3708814 . + . ID=gene-PUW38_18075;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=PUW38_18075 CP118116.1 Protein Homology CDS 3708533 3708814 . + 0 ID=cds-WJG80568.1;Parent=gene-PUW38_18075;Dbxref=NCBI_GP:WJG80568.1;Name=WJG80568.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=PUW38_18075;product=peptidylprolyl isomerase PpiC;protein_id=WJG80568.1;transl_table=11 CP118116.1 Genbank gene 3708906 3710381 . - . ID=gene-PUW38_18080;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=PUW38_18080 CP118116.1 Protein Homology CDS 3708906 3710381 . - 0 ID=cds-WJG80569.1;Parent=gene-PUW38_18080;Dbxref=NCBI_GP:WJG80569.1;Name=WJG80569.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=PUW38_18080;product=ketol-acid reductoisomerase;protein_id=WJG80569.1;transl_table=11 CP118116.1 Genbank gene 3710546 3711433 . + . ID=gene-PUW38_18085;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=PUW38_18085 CP118116.1 Protein Homology CDS 3710546 3711433 . + 0 ID=cds-WJG80570.1;Parent=gene-PUW38_18085;Dbxref=NCBI_GP:WJG80570.1;Name=WJG80570.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=PUW38_18085;product=HTH-type transcriptional activator IlvY;protein_id=WJG80570.1;transl_table=11 CP118116.1 Genbank gene 3711436 3711777 . - . ID=gene-PUW38_18090;Name=PUW38_18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18090 CP118116.1 Protein Homology CDS 3711436 3711777 . - 0 ID=cds-WJG80571.1;Parent=gene-PUW38_18090;Dbxref=NCBI_GP:WJG80571.1;Name=WJG80571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=PUW38_18090;product=helix-turn-helix domain-containing protein;protein_id=WJG80571.1;transl_table=11 CP118116.1 Genbank gene 3711774 3712091 . - . ID=gene-PUW38_18095;Name=PUW38_18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18095 CP118116.1 Protein Homology CDS 3711774 3712091 . - 0 ID=cds-WJG83281.1;Parent=gene-PUW38_18095;Dbxref=NCBI_GP:WJG83281.1;Name=WJG83281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=PUW38_18095;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG83281.1;transl_table=11 CP118116.1 Genbank gene 3712374 3713918 . - . ID=gene-PUW38_18100;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=PUW38_18100 CP118116.1 Protein Homology CDS 3712374 3713918 . - 0 ID=cds-WJG83282.1;Parent=gene-PUW38_18100;Dbxref=NCBI_GP:WJG83282.1;Name=WJG83282.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=PUW38_18100;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WJG83282.1;transl_table=11 CP118116.1 Genbank gene 3713921 3715771 . - . ID=gene-PUW38_18105;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=PUW38_18105 CP118116.1 Protein Homology CDS 3713921 3715771 . - 0 ID=cds-WJG80572.1;Parent=gene-PUW38_18105;Dbxref=NCBI_GP:WJG80572.1;Name=WJG80572.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=PUW38_18105;product=dihydroxy-acid dehydratase;protein_id=WJG80572.1;transl_table=11 CP118116.1 Genbank gene 3715931 3716860 . - . ID=gene-PUW38_18110;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=PUW38_18110 CP118116.1 Protein Homology CDS 3715931 3716860 . - 0 ID=cds-WJG80573.1;Parent=gene-PUW38_18110;Dbxref=NCBI_GP:WJG80573.1;Name=WJG80573.1;Ontology_term=GO:0009082,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=PUW38_18110;product=branched-chain-amino-acid transaminase;protein_id=WJG80573.1;transl_table=11 CP118116.1 Genbank gene 3716878 3717141 . - . ID=gene-PUW38_18115;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=PUW38_18115 CP118116.1 Protein Homology CDS 3716878 3717141 . - 0 ID=cds-WJG80574.1;Parent=gene-PUW38_18115;Dbxref=NCBI_GP:WJG80574.1;Name=WJG80574.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=PUW38_18115;product=acetolactate synthase 2 small subunit;protein_id=WJG80574.1;transl_table=11 CP118116.1 Genbank gene 3717138 3718784 . - . ID=gene-PUW38_18120;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=PUW38_18120 CP118116.1 Protein Homology CDS 3717138 3718784 . - 0 ID=cds-WJG80575.1;Parent=gene-PUW38_18120;Dbxref=NCBI_GP:WJG80575.1;Name=WJG80575.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=PUW38_18120;product=acetolactate synthase 2 catalytic subunit;protein_id=WJG80575.1;transl_table=11 CP118116.1 Genbank gene 3718787 3718837 . - . ID=gene-PUW38_18125;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=PUW38_18125 CP118116.1 Protein Homology CDS 3718787 3718837 . - 0 ID=cds-WJG83283.1;Parent=gene-PUW38_18125;Dbxref=NCBI_GP:WJG83283.1;Name=WJG83283.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=PUW38_18125;product=peptide IlvX;protein_id=WJG83283.1;transl_table=11 CP118116.1 Genbank gene 3718923 3719021 . - . ID=gene-PUW38_18130;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=PUW38_18130 CP118116.1 Protein Homology CDS 3718923 3719021 . - 0 ID=cds-WJG80576.1;Parent=gene-PUW38_18130;Dbxref=NCBI_GP:WJG80576.1;Name=WJG80576.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=PUW38_18130;product=ilv operon leader peptide;protein_id=WJG80576.1;transl_table=11 CP118116.1 Genbank gene 3719373 3720893 . + . ID=gene-PUW38_18135;Name=PUW38_18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18135 CP118116.1 Protein Homology CDS 3719373 3720893 . + 0 ID=cds-WJG80577.1;Parent=gene-PUW38_18135;Dbxref=NCBI_GP:WJG80577.1;Name=WJG80577.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=PUW38_18135;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WJG80577.1;transl_table=11 CP118116.1 Genbank gene 3720918 3721256 . - . ID=gene-PUW38_18140;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=PUW38_18140 CP118116.1 Protein Homology CDS 3720918 3721256 . - 0 ID=cds-WJG80578.1;Parent=gene-PUW38_18140;Dbxref=NCBI_GP:WJG80578.1;Name=WJG80578.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=PUW38_18140;product=macrodomain Ori organization protein MaoP;protein_id=WJG80578.1;transl_table=11 CP118116.1 Genbank gene 3721363 3722211 . + . ID=gene-PUW38_18145;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=PUW38_18145 CP118116.1 Protein Homology CDS 3721363 3722211 . + 0 ID=cds-WJG80579.1;Parent=gene-PUW38_18145;Dbxref=NCBI_GP:WJG80579.1;Name=WJG80579.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=PUW38_18145;product=HTH-type transcriptional regulator HdfR;protein_id=WJG80579.1;transl_table=11 CP118116.1 Genbank gene 3722313 3722387 . - . ID=gene-PUW38_18150;Name=PUW38_18150;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_18150 CP118116.1 tRNAscan-SE tRNA 3722313 3722387 . - . ID=rna-PUW38_18150;Parent=gene-PUW38_18150;anticodon=(pos:complement(3722353..3722355));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18150;product=tRNA-Trp CP118116.1 tRNAscan-SE exon 3722313 3722387 . - . ID=exon-PUW38_18150-1;Parent=rna-PUW38_18150;anticodon=(pos:complement(3722353..3722355));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18150;product=tRNA-Trp CP118116.1 Genbank gene 3722396 3722472 . - . ID=gene-PUW38_18155;Name=PUW38_18155;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_18155 CP118116.1 tRNAscan-SE tRNA 3722396 3722472 . - . ID=rna-PUW38_18155;Parent=gene-PUW38_18155;anticodon=(pos:complement(3722436..3722438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18155;product=tRNA-Asp CP118116.1 tRNAscan-SE exon 3722396 3722472 . - . ID=exon-PUW38_18155-1;Parent=rna-PUW38_18155;anticodon=(pos:complement(3722436..3722438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18155;product=tRNA-Asp CP118116.1 Genbank gene 3722664 3722779 . - . ID=gene-PUW38_18160;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW38_18160 CP118116.1 cmsearch rRNA 3722664 3722779 . - . ID=rna-PUW38_18160;Parent=gene-PUW38_18160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_18160;product=5S ribosomal RNA CP118116.1 cmsearch exon 3722664 3722779 . - . ID=exon-PUW38_18160-1;Parent=rna-PUW38_18160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_18160;product=5S ribosomal RNA CP118116.1 Genbank gene 3722976 3725964 . - . ID=gene-PUW38_18165;Name=PUW38_18165;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_18165 CP118116.1 cmsearch rRNA 3722976 3725964 . - . ID=rna-PUW38_18165;Parent=gene-PUW38_18165;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_18165;product=23S ribosomal RNA CP118116.1 cmsearch exon 3722976 3725964 . - . ID=exon-PUW38_18165-1;Parent=rna-PUW38_18165;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_18165;product=23S ribosomal RNA CP118116.1 Genbank gene 3726147 3726222 . - . ID=gene-PUW38_18170;Name=PUW38_18170;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_18170 CP118116.1 tRNAscan-SE tRNA 3726147 3726222 . - . ID=rna-PUW38_18170;Parent=gene-PUW38_18170;anticodon=(pos:complement(3726187..3726189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18170;product=tRNA-Ala CP118116.1 tRNAscan-SE exon 3726147 3726222 . - . ID=exon-PUW38_18170-1;Parent=rna-PUW38_18170;anticodon=(pos:complement(3726187..3726189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18170;product=tRNA-Ala CP118116.1 Genbank gene 3726334 3726410 . - . ID=gene-PUW38_18175;Name=PUW38_18175;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_18175 CP118116.1 tRNAscan-SE tRNA 3726334 3726410 . - . ID=rna-PUW38_18175;Parent=gene-PUW38_18175;anticodon=(pos:complement(3726374..3726376));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18175;product=tRNA-Ile CP118116.1 tRNAscan-SE exon 3726334 3726410 . - . ID=exon-PUW38_18175-1;Parent=rna-PUW38_18175;anticodon=(pos:complement(3726374..3726376));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18175;product=tRNA-Ile CP118116.1 Genbank gene 3726480 3728021 . - . ID=gene-PUW38_18180;Name=PUW38_18180;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_18180 CP118116.1 cmsearch rRNA 3726480 3728021 . - . ID=rna-PUW38_18180;Parent=gene-PUW38_18180;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_18180;product=16S ribosomal RNA CP118116.1 cmsearch exon 3726480 3728021 . - . ID=exon-PUW38_18180-1;Parent=rna-PUW38_18180;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_18180;product=16S ribosomal RNA CP118116.1 Genbank gene 3728502 3729206 . + . ID=gene-PUW38_18185;Name=PUW38_18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18185 CP118116.1 Protein Homology CDS 3728502 3729206 . + 0 ID=cds-WJG80580.1;Parent=gene-PUW38_18185;Dbxref=NCBI_GP:WJG80580.1;Name=WJG80580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=PUW38_18185;product=FadR/GntR family transcriptional regulator;protein_id=WJG80580.1;transl_table=11 CP118116.1 Genbank gene 3729218 3730645 . + . ID=gene-PUW38_18190;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=PUW38_18190 CP118116.1 Protein Homology CDS 3729218 3730645 . + 0 ID=cds-WJG80581.1;Parent=gene-PUW38_18190;Dbxref=NCBI_GP:WJG80581.1;Name=WJG80581.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=PUW38_18190;product=multidrug transporter subunit MdtD;protein_id=WJG80581.1;transl_table=11 CP118116.1 Genbank gene 3730611 3731609 . - . ID=gene-PUW38_18195;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=PUW38_18195 CP118116.1 Protein Homology CDS 3730611 3731609 . - 0 ID=cds-WJG80582.1;Parent=gene-PUW38_18195;Dbxref=NCBI_GP:WJG80582.1;Name=WJG80582.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=PUW38_18195;product=ribose operon transcriptional repressor RbsR;protein_id=WJG80582.1;transl_table=11 CP118116.1 Genbank pseudogene 3731613 3732541 . - . ID=gene-PUW38_18200;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=pseudogene;locus_tag=PUW38_18200;pseudo=true CP118116.1 Protein Homology CDS 3731613 3732541 . - 0 ID=cds-PUW38_18200;Parent=gene-PUW38_18200;Note=frameshifted;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=PUW38_18200;product=ribokinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3732674 3733561 . - . ID=gene-PUW38_18205;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=PUW38_18205 CP118116.1 Protein Homology CDS 3732674 3733561 . - 0 ID=cds-WJG80583.1;Parent=gene-PUW38_18205;Dbxref=NCBI_GP:WJG80583.1;Name=WJG80583.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=PUW38_18205;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WJG80583.1;transl_table=11 CP118116.1 Genbank gene 3733586 3734551 . - . ID=gene-PUW38_18210;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=PUW38_18210 CP118116.1 Protein Homology CDS 3733586 3734551 . - 0 ID=cds-WJG80584.1;Parent=gene-PUW38_18210;Dbxref=NCBI_GP:WJG80584.1;Name=WJG80584.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=PUW38_18210;product=ribose ABC transporter permease;protein_id=WJG80584.1;transl_table=11 CP118116.1 Genbank pseudogene 3734557 3736062 . - . ID=gene-PUW38_18215;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=pseudogene;locus_tag=PUW38_18215;pseudo=true CP118116.1 Protein Homology CDS 3734557 3736062 . - 0 ID=cds-PUW38_18215;Parent=gene-PUW38_18215;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=PUW38_18215;product=ribose ABC transporter ATP-binding protein RbsA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3736070 3736489 . - . ID=gene-PUW38_18220;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=PUW38_18220 CP118116.1 Protein Homology CDS 3736070 3736489 . - 0 ID=cds-WJG80585.1;Parent=gene-PUW38_18220;Dbxref=NCBI_GP:WJG80585.1;Name=WJG80585.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=PUW38_18220;product=D-ribose pyranase;protein_id=WJG80585.1;transl_table=11 CP118116.1 Genbank gene 3736706 3738574 . - . ID=gene-PUW38_18225;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=PUW38_18225 CP118116.1 Protein Homology CDS 3736706 3738574 . - 0 ID=cds-WJG80586.1;Parent=gene-PUW38_18225;Dbxref=NCBI_GP:WJG80586.1;Name=WJG80586.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=PUW38_18225;product=low affinity potassium transporter Kup;protein_id=WJG80586.1;transl_table=11 CP118116.1 Genbank gene 3738918 3740414 . + . ID=gene-PUW38_18230;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=PUW38_18230 CP118116.1 Protein Homology CDS 3738918 3740414 . + 0 ID=cds-WJG80587.1;Parent=gene-PUW38_18230;Dbxref=NCBI_GP:WJG80587.1;Name=WJG80587.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=PUW38_18230;product=ATPase RavA;protein_id=WJG80587.1;transl_table=11 CP118116.1 Genbank gene 3740408 3741859 . + . ID=gene-PUW38_18235;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=PUW38_18235 CP118116.1 Protein Homology CDS 3740408 3741859 . + 0 ID=cds-WJG80588.1;Parent=gene-PUW38_18235;Dbxref=NCBI_GP:WJG80588.1;Name=WJG80588.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=PUW38_18235;product=ATPase RavA stimulator ViaA;protein_id=WJG80588.1;transl_table=11 CP118116.1 Genbank pseudogene 3741864 3742856 . - . ID=gene-PUW38_18240;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=pseudogene;locus_tag=PUW38_18240;pseudo=true CP118116.1 Protein Homology CDS 3741864 3742856 . - 0 ID=cds-PUW38_18240;Parent=gene-PUW38_18240;Note=internal stop;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=PUW38_18240;product=aspartate--ammonia ligase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3743007 3743465 . + . ID=gene-PUW38_18245;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=PUW38_18245 CP118116.1 Protein Homology CDS 3743007 3743465 . + 0 ID=cds-WJG80589.1;Parent=gene-PUW38_18245;Dbxref=NCBI_GP:WJG80589.1;Name=WJG80589.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=PUW38_18245;product=transcriptional regulator AsnC;protein_id=WJG80589.1;transl_table=11 CP118116.1 Genbank gene 3743555 3743998 . + . ID=gene-PUW38_18250;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=PUW38_18250 CP118116.1 Protein Homology CDS 3743555 3743998 . + 0 ID=cds-WJG80590.1;Parent=gene-PUW38_18250;Dbxref=NCBI_GP:WJG80590.1;Name=WJG80590.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=PUW38_18250;product=FMN-binding protein MioC;protein_id=WJG80590.1;transl_table=11 CP118116.1 Genbank gene 3744377 3746266 . + . ID=gene-PUW38_18255;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=PUW38_18255 CP118116.1 Protein Homology CDS 3744377 3746266 . + 0 ID=cds-WJG80591.1;Parent=gene-PUW38_18255;Dbxref=NCBI_GP:WJG80591.1;Name=WJG80591.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=PUW38_18255;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WJG80591.1;transl_table=11 CP118116.1 Genbank gene 3746369 3746992 . + . ID=gene-PUW38_18260;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=PUW38_18260 CP118116.1 Protein Homology CDS 3746369 3746992 . + 0 ID=cds-WJG80592.1;Parent=gene-PUW38_18260;Dbxref=NCBI_GP:WJG80592.1;Name=WJG80592.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=PUW38_18260;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WJG80592.1;transl_table=11 CP118116.1 Genbank gene 3747608 3747988 . + . ID=gene-PUW38_18265;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=PUW38_18265 CP118116.1 Protein Homology CDS 3747608 3747988 . + 0 ID=cds-WJG80593.1;Parent=gene-PUW38_18265;Dbxref=NCBI_GP:WJG80593.1;Name=WJG80593.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=PUW38_18265;product=F0F1 ATP synthase subunit I;protein_id=WJG80593.1;transl_table=11 CP118116.1 Genbank gene 3747997 3748812 . + . ID=gene-PUW38_18270;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=PUW38_18270 CP118116.1 Protein Homology CDS 3747997 3748812 . + 0 ID=cds-WJG80594.1;Parent=gene-PUW38_18270;Dbxref=NCBI_GP:WJG80594.1;Name=WJG80594.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=PUW38_18270;product=F0F1 ATP synthase subunit A;protein_id=WJG80594.1;transl_table=11 CP118116.1 Genbank gene 3748859 3749098 . + . ID=gene-PUW38_18275;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=PUW38_18275 CP118116.1 Protein Homology CDS 3748859 3749098 . + 0 ID=cds-WJG80595.1;Parent=gene-PUW38_18275;Dbxref=NCBI_GP:WJG80595.1;Name=WJG80595.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=PUW38_18275;product=F0F1 ATP synthase subunit C;protein_id=WJG80595.1;transl_table=11 CP118116.1 Genbank gene 3749158 3749628 . + . ID=gene-PUW38_18280;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=PUW38_18280 CP118116.1 Protein Homology CDS 3749158 3749628 . + 0 ID=cds-WJG80596.1;Parent=gene-PUW38_18280;Dbxref=NCBI_GP:WJG80596.1;Name=WJG80596.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=PUW38_18280;product=F0F1 ATP synthase subunit B;protein_id=WJG80596.1;transl_table=11 CP118116.1 Genbank gene 3749643 3750176 . + . ID=gene-PUW38_18285;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=PUW38_18285 CP118116.1 Protein Homology CDS 3749643 3750176 . + 0 ID=cds-WJG80597.1;Parent=gene-PUW38_18285;Dbxref=NCBI_GP:WJG80597.1;Name=WJG80597.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=PUW38_18285;product=F0F1 ATP synthase subunit delta;protein_id=WJG80597.1;transl_table=11 CP118116.1 Genbank gene 3750189 3751730 . + . ID=gene-PUW38_18290;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=PUW38_18290 CP118116.1 Protein Homology CDS 3750189 3751730 . + 0 ID=cds-WJG80598.1;Parent=gene-PUW38_18290;Dbxref=NCBI_GP:WJG80598.1;Name=WJG80598.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=PUW38_18290;product=F0F1 ATP synthase subunit alpha;protein_id=WJG80598.1;transl_table=11 CP118116.1 Genbank gene 3751781 3752644 . + . ID=gene-PUW38_18295;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=PUW38_18295 CP118116.1 Protein Homology CDS 3751781 3752644 . + 0 ID=cds-WJG80599.1;Parent=gene-PUW38_18295;Dbxref=NCBI_GP:WJG80599.1;Name=WJG80599.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=PUW38_18295;product=F0F1 ATP synthase subunit gamma;protein_id=WJG80599.1;transl_table=11 CP118116.1 Genbank gene 3752671 3754053 . + . ID=gene-PUW38_18300;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=PUW38_18300 CP118116.1 Protein Homology CDS 3752671 3754053 . + 0 ID=cds-WJG80600.1;Parent=gene-PUW38_18300;Dbxref=NCBI_GP:WJG80600.1;Name=WJG80600.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=PUW38_18300;product=F0F1 ATP synthase subunit beta;protein_id=WJG80600.1;transl_table=11 CP118116.1 Genbank gene 3754074 3754493 . + . ID=gene-PUW38_18305;Name=PUW38_18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18305 CP118116.1 Protein Homology CDS 3754074 3754493 . + 0 ID=cds-WJG80601.1;Parent=gene-PUW38_18305;Dbxref=NCBI_GP:WJG80601.1;Name=WJG80601.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=PUW38_18305;product=F0F1 ATP synthase subunit epsilon;protein_id=WJG80601.1;transl_table=11 CP118116.1 Genbank gene 3754723 3755421 . + . ID=gene-PUW38_18310;Name=PUW38_18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18310 CP118116.1 Protein Homology CDS 3754723 3755421 . + 0 ID=cds-WJG80602.1;Parent=gene-PUW38_18310;Dbxref=NCBI_GP:WJG80602.1;Name=WJG80602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=PUW38_18310;product=Bax inhibitor-1 family protein;protein_id=WJG80602.1;transl_table=11 CP118116.1 Genbank gene 3755741 3757111 . + . ID=gene-PUW38_18315;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=PUW38_18315 CP118116.1 Protein Homology CDS 3755741 3757111 . + 0 ID=cds-WJG80603.1;Parent=gene-PUW38_18315;Dbxref=NCBI_GP:WJG80603.1;Name=WJG80603.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=PUW38_18315;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WJG80603.1;transl_table=11 CP118116.1 Genbank pseudogene 3757300 3759128 . + . ID=gene-PUW38_18320;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=pseudogene;locus_tag=PUW38_18320;pseudo=true CP118116.1 Protein Homology CDS 3757300 3759128 . + 0 ID=cds-PUW38_18320;Parent=gene-PUW38_18320;Note=frameshifted;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=PUW38_18320;product=glutamine--fructose-6-phosphate transaminase (isomerizing);pseudo=true;transl_table=11 CP118116.1 Genbank gene 3759279 3761036 . - . ID=gene-PUW38_18325;Name=PUW38_18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18325 CP118116.1 Protein Homology CDS 3759279 3761036 . - 0 ID=cds-WJG80604.1;Parent=gene-PUW38_18325;Dbxref=NCBI_GP:WJG80604.1;Name=WJG80604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=PUW38_18325;product=SgrR family transcriptional regulator;protein_id=WJG80604.1;transl_table=11 CP118116.1 Genbank gene 3761131 3761949 . + . ID=gene-PUW38_18330;Name=PUW38_18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18330 CP118116.1 Protein Homology CDS 3761131 3761949 . + 0 ID=cds-WJG80605.1;Parent=gene-PUW38_18330;Dbxref=NCBI_GP:WJG80605.1;Name=WJG80605.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=PUW38_18330;product=shikimate 5-dehydrogenase;protein_id=WJG80605.1;transl_table=11 CP118116.1 Genbank gene 3761998 3763371 . + . ID=gene-PUW38_18335;Name=PUW38_18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18335 CP118116.1 Protein Homology CDS 3761998 3763371 . + 0 ID=cds-WJG80606.1;Parent=gene-PUW38_18335;Dbxref=NCBI_GP:WJG80606.1;Name=WJG80606.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=PUW38_18335;product=fructose-specific PTS transporter subunit EIIC;protein_id=WJG80606.1;transl_table=11 CP118116.1 Genbank gene 3763537 3764577 . + . ID=gene-PUW38_18340;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=PUW38_18340 CP118116.1 Protein Homology CDS 3763537 3764577 . + 0 ID=cds-WJG80607.1;Parent=gene-PUW38_18340;Dbxref=NCBI_GP:WJG80607.1;Name=WJG80607.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=PUW38_18340;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WJG80607.1;transl_table=11 CP118116.1 Genbank gene 3764713 3765672 . + . ID=gene-PUW38_18345;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=PUW38_18345 CP118116.1 Protein Homology CDS 3764713 3765672 . + 0 ID=cds-WJG80608.1;Parent=gene-PUW38_18345;Dbxref=NCBI_GP:WJG80608.1;Name=WJG80608.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=PUW38_18345;product=phosphate ABC transporter permease PstC;protein_id=WJG80608.1;transl_table=11 CP118116.1 Genbank gene 3765672 3766562 . + . ID=gene-PUW38_18350;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=PUW38_18350 CP118116.1 Protein Homology CDS 3765672 3766562 . + 0 ID=cds-WJG80609.1;Parent=gene-PUW38_18350;Dbxref=NCBI_GP:WJG80609.1;Name=WJG80609.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=PUW38_18350;product=phosphate ABC transporter permease PstA;protein_id=WJG80609.1;transl_table=11 CP118116.1 Genbank gene 3766649 3767422 . + . ID=gene-PUW38_18355;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=PUW38_18355 CP118116.1 Protein Homology CDS 3766649 3767422 . + 0 ID=cds-WJG80610.1;Parent=gene-PUW38_18355;Dbxref=NCBI_GP:WJG80610.1;Name=WJG80610.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=PUW38_18355;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WJG80610.1;transl_table=11 CP118116.1 Genbank gene 3767437 3768162 . + . ID=gene-PUW38_18360;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=PUW38_18360 CP118116.1 Protein Homology CDS 3767437 3768162 . + 0 ID=cds-WJG80611.1;Parent=gene-PUW38_18360;Dbxref=NCBI_GP:WJG80611.1;Name=WJG80611.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=PUW38_18360;product=phosphate signaling complex protein PhoU;protein_id=WJG80611.1;transl_table=11 CP118116.1 Genbank gene 3768257 3768922 . - . ID=gene-PUW38_18365;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=PUW38_18365 CP118116.1 Protein Homology CDS 3768257 3768922 . - 0 ID=cds-WJG80612.1;Parent=gene-PUW38_18365;Dbxref=NCBI_GP:WJG80612.1;Name=WJG80612.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=PUW38_18365;product=6-phosphogluconate phosphatase;protein_id=WJG80612.1;transl_table=11 CP118116.1 Genbank gene 3769091 3770428 . + . ID=gene-PUW38_18370;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=PUW38_18370 CP118116.1 Protein Homology CDS 3769091 3770428 . + 0 ID=cds-WJG80613.1;Parent=gene-PUW38_18370;Dbxref=NCBI_GP:WJG80613.1;Name=WJG80613.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=PUW38_18370;product=adenine permease AdeP;protein_id=WJG80613.1;transl_table=11 CP118116.1 Genbank gene 3770473 3771057 . - . ID=gene-PUW38_18375;Name=PUW38_18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18375 CP118116.1 Protein Homology CDS 3770473 3771057 . - 0 ID=cds-WJG80614.1;Parent=gene-PUW38_18375;Dbxref=NCBI_GP:WJG80614.1;Name=WJG80614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=PUW38_18375;product=NAD(P)H-dependent oxidoreductase;protein_id=WJG80614.1;transl_table=11 CP118116.1 Genbank gene 3771057 3771812 . - . ID=gene-PUW38_18380;Name=PUW38_18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18380 CP118116.1 Protein Homology CDS 3771057 3771812 . - 0 ID=cds-WJG80615.1;Parent=gene-PUW38_18380;Dbxref=NCBI_GP:WJG80615.1;Name=WJG80615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=PUW38_18380;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WJG80615.1;transl_table=11 CP118116.1 Genbank gene 3771970 3772908 . - . ID=gene-PUW38_18385;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=PUW38_18385 CP118116.1 Protein Homology CDS 3771970 3772908 . - 0 ID=cds-WJG80616.1;Parent=gene-PUW38_18385;Dbxref=NCBI_GP:WJG80616.1;Name=WJG80616.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=PUW38_18385;product=HTH-type transcriptional regulator YidZ;protein_id=WJG80616.1;transl_table=11 CP118116.1 Genbank gene 3772877 3774001 . - . ID=gene-PUW38_18390;Name=PUW38_18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18390 CP118116.1 Protein Homology CDS 3772877 3774001 . - 0 ID=cds-WJG80617.1;Parent=gene-PUW38_18390;Dbxref=NCBI_GP:WJG80617.1;Name=WJG80617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=PUW38_18390;product=MFS transporter;protein_id=WJG80617.1;transl_table=11 CP118116.1 Genbank gene 3774184 3775548 . - . ID=gene-PUW38_18395;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=PUW38_18395 CP118116.1 Protein Homology CDS 3774184 3775548 . - 0 ID=cds-WJG80618.1;Parent=gene-PUW38_18395;Dbxref=NCBI_GP:WJG80618.1;Name=WJG80618.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=PUW38_18395;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WJG80618.1;transl_table=11 CP118116.1 Genbank gene 3775690 3777336 . - . ID=gene-PUW38_18400;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=PUW38_18400 CP118116.1 Protein Homology CDS 3775690 3777336 . - 0 ID=cds-WJG80619.1;Parent=gene-PUW38_18400;Dbxref=NCBI_GP:WJG80619.1;Name=WJG80619.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=PUW38_18400;product=membrane protein insertase YidC;protein_id=WJG80619.1;transl_table=11 CP118116.1 Genbank gene 3777339 3777596 . - . ID=gene-PUW38_18405;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=PUW38_18405 CP118116.1 Protein Homology CDS 3777339 3777596 . - 0 ID=cds-WJG80620.1;Parent=gene-PUW38_18405;Dbxref=NCBI_GP:WJG80620.1;Name=WJG80620.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=PUW38_18405;product=membrane protein insertion efficiency factor YidD;protein_id=WJG80620.1;transl_table=11 CP118116.1 Genbank pseudogene 3777560 3777918 . - . ID=gene-PUW38_18410;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=pseudogene;locus_tag=PUW38_18410;pseudo=true CP118116.1 Protein Homology CDS 3777560 3777918 . - 0 ID=cds-PUW38_18410;Parent=gene-PUW38_18410;Note=frameshifted;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=PUW38_18410;product=ribonuclease P protein component;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3777935 3778075 . - . ID=gene-PUW38_18415;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=PUW38_18415 CP118116.1 Protein Homology CDS 3777935 3778075 . - 0 ID=cds-WJG80621.1;Parent=gene-PUW38_18415;Dbxref=NCBI_GP:WJG80621.1;Name=WJG80621.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=PUW38_18415;product=50S ribosomal protein L34;protein_id=WJG80621.1;transl_table=11 CP118116.1 Genbank pseudogene 3778736 3780135 . + . ID=gene-PUW38_18420;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=pseudogene;locus_tag=PUW38_18420;pseudo=true CP118116.1 Protein Homology CDS 3778736 3780135 . + 0 ID=cds-PUW38_18420;Parent=gene-PUW38_18420;Note=frameshifted;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=PUW38_18420;product=chromosomal replication initiator protein DnaA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3780140 3781240 . + . ID=gene-PUW38_18425;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=PUW38_18425 CP118116.1 Protein Homology CDS 3780140 3781240 . + 0 ID=cds-WJG80622.1;Parent=gene-PUW38_18425;Dbxref=NCBI_GP:WJG80622.1;Name=WJG80622.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=PUW38_18425;product=DNA polymerase III subunit beta;protein_id=WJG80622.1;transl_table=11 CP118116.1 Genbank gene 3781388 3782461 . + . ID=gene-PUW38_18430;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=PUW38_18430 CP118116.1 Protein Homology CDS 3781388 3782461 . + 0 ID=cds-WJG80623.1;Parent=gene-PUW38_18430;Dbxref=NCBI_GP:WJG80623.1;Name=WJG80623.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=PUW38_18430;product=DNA replication/repair protein RecF;protein_id=WJG80623.1;transl_table=11 CP118116.1 Genbank gene 3782490 3784904 . + . ID=gene-PUW38_18435;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=PUW38_18435 CP118116.1 Protein Homology CDS 3782490 3784904 . + 0 ID=cds-WJG80624.1;Parent=gene-PUW38_18435;Dbxref=NCBI_GP:WJG80624.1;Name=WJG80624.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=PUW38_18435;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WJG80624.1;transl_table=11 CP118116.1 Genbank gene 3784923 3785819 . - . ID=gene-PUW38_18440;Name=PUW38_18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18440 CP118116.1 Protein Homology CDS 3784923 3785819 . - 0 ID=cds-WJG80625.1;Parent=gene-PUW38_18440;Dbxref=NCBI_GP:WJG80625.1;Name=WJG80625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=PUW38_18440;product=LysR family transcriptional regulator;protein_id=WJG80625.1;transl_table=11 CP118116.1 Genbank gene 3785934 3787127 . - . ID=gene-PUW38_18445;Name=PUW38_18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18445 CP118116.1 Protein Homology CDS 3785934 3787127 . - 0 ID=cds-WJG80626.1;Parent=gene-PUW38_18445;Dbxref=NCBI_GP:WJG80626.1;Name=WJG80626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=PUW38_18445;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WJG80626.1;transl_table=11 CP118116.1 Genbank pseudogene 3787141 3788403 . - . ID=gene-PUW38_18450;Name=PUW38_18450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18450;pseudo=true CP118116.1 Protein Homology CDS 3787141 3788403 . - 0 ID=cds-PUW38_18450;Parent=gene-PUW38_18450;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=PUW38_18450;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3788708 3789553 . + . ID=gene-PUW38_18455;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=PUW38_18455 CP118116.1 Protein Homology CDS 3788708 3789553 . + 0 ID=cds-WJG80627.1;Parent=gene-PUW38_18455;Dbxref=NCBI_GP:WJG80627.1;Name=WJG80627.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=PUW38_18455;product=sugar-phosphatase;protein_id=WJG80627.1;transl_table=11 CP118116.1 Genbank gene 3789814 3790503 . + . ID=gene-PUW38_18460;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=PUW38_18460 CP118116.1 Protein Homology CDS 3789814 3790503 . + 0 ID=cds-WJG80628.1;Parent=gene-PUW38_18460;Dbxref=NCBI_GP:WJG80628.1;Name=WJG80628.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=PUW38_18460;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WJG80628.1;transl_table=11 CP118116.1 Genbank gene 3790500 3791378 . + . ID=gene-PUW38_18465;Name=PUW38_18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18465 CP118116.1 Protein Homology CDS 3790500 3791378 . + 0 ID=cds-WJG80629.1;Parent=gene-PUW38_18465;Dbxref=NCBI_GP:WJG80629.1;Name=WJG80629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=PUW38_18465;product=2-dehydro-3-deoxygalactonokinase;protein_id=WJG80629.1;transl_table=11 CP118116.1 Genbank gene 3791362 3791979 . + . ID=gene-PUW38_18470;Name=PUW38_18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18470 CP118116.1 Protein Homology CDS 3791362 3791979 . + 0 ID=cds-WJG80630.1;Parent=gene-PUW38_18470;Dbxref=NCBI_GP:WJG80630.1;Name=WJG80630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=PUW38_18470;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WJG80630.1;transl_table=11 CP118116.1 Genbank gene 3791976 3793124 . + . ID=gene-PUW38_18475;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=PUW38_18475 CP118116.1 Protein Homology CDS 3791976 3793124 . + 0 ID=cds-WJG80631.1;Parent=gene-PUW38_18475;Dbxref=NCBI_GP:WJG80631.1;Name=WJG80631.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=PUW38_18475;product=galactonate dehydratase;protein_id=WJG80631.1;transl_table=11 CP118116.1 Genbank gene 3793209 3794546 . + . ID=gene-PUW38_18480;Name=PUW38_18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18480 CP118116.1 Protein Homology CDS 3793209 3794546 . + 0 ID=cds-WJG80632.1;Parent=gene-PUW38_18480;Dbxref=NCBI_GP:WJG80632.1;Name=WJG80632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=PUW38_18480;product=MFS transporter;protein_id=WJG80632.1;transl_table=11 CP118116.1 Genbank pseudogene 3794572 3797306 . - . ID=gene-PUW38_18485;Name=torS;gbkey=Gene;gene=torS;gene_biotype=pseudogene;locus_tag=PUW38_18485;pseudo=true CP118116.1 Protein Homology CDS 3794572 3797306 . - 0 ID=cds-PUW38_18485;Parent=gene-PUW38_18485;Note=frameshifted;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=PUW38_18485;product=TMAO reductase system sensor histidine kinase/response regulator TorS;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3797386 3798426 . + . ID=gene-PUW38_18490;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=PUW38_18490 CP118116.1 Protein Homology CDS 3797386 3798426 . + 0 ID=cds-WJG80633.1;Parent=gene-PUW38_18490;Dbxref=NCBI_GP:WJG80633.1;Name=WJG80633.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=PUW38_18490;product=TMAO reductase system periplasmic protein TorT;protein_id=WJG80633.1;transl_table=11 CP118116.1 Genbank gene 3798399 3799091 . - . ID=gene-PUW38_18495;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=PUW38_18495 CP118116.1 Protein Homology CDS 3798399 3799091 . - 0 ID=cds-WJG83284.1;Parent=gene-PUW38_18495;Dbxref=NCBI_GP:WJG83284.1;Name=WJG83284.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=PUW38_18495;product=two-component system response regulator TorR;protein_id=WJG83284.1;transl_table=11 CP118116.1 Genbank gene 3799221 3800405 . + . ID=gene-PUW38_18500;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=PUW38_18500 CP118116.1 Protein Homology CDS 3799221 3800405 . + 0 ID=cds-WJG80634.1;Parent=gene-PUW38_18500;Dbxref=NCBI_GP:WJG80634.1;Name=WJG80634.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=PUW38_18500;product=pentaheme c-type cytochrome TorC;protein_id=WJG80634.1;transl_table=11 CP118116.1 Genbank gene 3800395 3802947 . + . ID=gene-PUW38_18505;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=PUW38_18505 CP118116.1 Protein Homology CDS 3800395 3802947 . + 0 ID=cds-WJG80635.1;Parent=gene-PUW38_18505;Dbxref=NCBI_GP:WJG80635.1;Name=WJG80635.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=PUW38_18505;product=trimethylamine-N-oxide reductase TorA;protein_id=WJG80635.1;transl_table=11 CP118116.1 Genbank gene 3802940 3803572 . + . ID=gene-PUW38_18510;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=PUW38_18510 CP118116.1 Protein Homology CDS 3802940 3803572 . + 0 ID=cds-WJG80636.1;Parent=gene-PUW38_18510;Dbxref=NCBI_GP:WJG80636.1;Name=WJG80636.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=PUW38_18510;product=molecular chaperone TorD;protein_id=WJG80636.1;transl_table=11 CP118116.1 Genbank gene 3803769 3805160 . + . ID=gene-PUW38_18515;Name=PUW38_18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18515 CP118116.1 Protein Homology CDS 3803769 3805160 . + 0 ID=cds-WJG83285.1;Parent=gene-PUW38_18515;Dbxref=NCBI_GP:WJG83285.1;Name=WJG83285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=PUW38_18515;product=cytochrome-c peroxidase;protein_id=WJG83285.1;transl_table=11 CP118116.1 Genbank gene 3805166 3805783 . + . ID=gene-PUW38_18520;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PUW38_18520 CP118116.1 Protein Homology CDS 3805166 3805783 . + 0 ID=cds-WJG83286.1;Parent=gene-PUW38_18520;Dbxref=NCBI_GP:WJG83286.1;Name=WJG83286.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=PUW38_18520;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WJG83286.1;transl_table=11 CP118116.1 Genbank gene 3805780 3806439 . + . ID=gene-PUW38_18525;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PUW38_18525 CP118116.1 Protein Homology CDS 3805780 3806439 . + 0 ID=cds-WJG80637.1;Parent=gene-PUW38_18525;Dbxref=NCBI_GP:WJG80637.1;Name=WJG80637.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=PUW38_18525;product=heme exporter protein CcmB;protein_id=WJG80637.1;transl_table=11 CP118116.1 Genbank gene 3806491 3807228 . + . ID=gene-PUW38_18530;Name=PUW38_18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18530 CP118116.1 Protein Homology CDS 3806491 3807228 . + 0 ID=cds-WJG80638.1;Parent=gene-PUW38_18530;Dbxref=NCBI_GP:WJG80638.1;Name=WJG80638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=PUW38_18530;product=heme ABC transporter permease;protein_id=WJG80638.1;transl_table=11 CP118116.1 Genbank gene 3807225 3807437 . + . ID=gene-PUW38_18535;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PUW38_18535 CP118116.1 Protein Homology CDS 3807225 3807437 . + 0 ID=cds-WJG80639.1;Parent=gene-PUW38_18535;Dbxref=NCBI_GP:WJG80639.1;Name=WJG80639.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=PUW38_18535;product=heme exporter protein CcmD;protein_id=WJG80639.1;transl_table=11 CP118116.1 Genbank gene 3807434 3807913 . + . ID=gene-PUW38_18540;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PUW38_18540 CP118116.1 Protein Homology CDS 3807434 3807913 . + 0 ID=cds-WJG80640.1;Parent=gene-PUW38_18540;Dbxref=NCBI_GP:WJG80640.1;Name=WJG80640.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=PUW38_18540;product=cytochrome c maturation protein CcmE;protein_id=WJG80640.1;transl_table=11 CP118116.1 Genbank gene 3807910 3809841 . + . ID=gene-PUW38_18545;Name=PUW38_18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18545 CP118116.1 Protein Homology CDS 3807910 3809841 . + 0 ID=cds-WJG80641.1;Parent=gene-PUW38_18545;Dbxref=NCBI_GP:WJG80641.1;Name=WJG80641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=PUW38_18545;product=heme lyase CcmF/NrfE family subunit;protein_id=WJG80641.1;transl_table=11 CP118116.1 Genbank gene 3809838 3810395 . + . ID=gene-PUW38_18550;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PUW38_18550 CP118116.1 Protein Homology CDS 3809838 3810395 . + 0 ID=cds-WJG80642.1;Parent=gene-PUW38_18550;Dbxref=NCBI_GP:WJG80642.1;Name=WJG80642.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=PUW38_18550;product=thiol:disulfide interchange protein DsbE;protein_id=WJG80642.1;transl_table=11 CP118116.1 Genbank gene 3810392 3811444 . + . ID=gene-PUW38_18555;Name=PUW38_18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18555 CP118116.1 Protein Homology CDS 3810392 3811444 . + 0 ID=cds-WJG80643.1;Parent=gene-PUW38_18555;Dbxref=NCBI_GP:WJG80643.1;Name=WJG80643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=PUW38_18555;product=cytochrome c-type biogenesis protein CcmH;protein_id=WJG80643.1;transl_table=11 CP118116.1 Genbank gene 3811566 3812792 . + . ID=gene-PUW38_18560;Name=PUW38_18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18560 CP118116.1 Protein Homology CDS 3811566 3812792 . + 0 ID=cds-WJG80644.1;Parent=gene-PUW38_18560;Dbxref=NCBI_GP:WJG80644.1;Name=WJG80644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=PUW38_18560;product=DUF3748 domain-containing protein;protein_id=WJG80644.1;transl_table=11 CP118116.1 Genbank gene 3812794 3813126 . - . ID=gene-PUW38_18565;Name=PUW38_18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18565 CP118116.1 Protein Homology CDS 3812794 3813126 . - 0 ID=cds-WJG83287.1;Parent=gene-PUW38_18565;Dbxref=NCBI_GP:WJG83287.1;Name=WJG83287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=PUW38_18565;product=YceK/YidQ family lipoprotein;protein_id=WJG83287.1;transl_table=11 CP118116.1 cmsearch sequence_feature 3813369 3813442 . + . ID=id-CP118116.1:3813369..3813442;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118116.1 Genbank gene 3813436 3813849 . + . ID=gene-PUW38_18570;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=PUW38_18570 CP118116.1 Protein Homology CDS 3813436 3813849 . + 0 ID=cds-WJG80645.1;Parent=gene-PUW38_18570;Dbxref=NCBI_GP:WJG80645.1;Name=WJG80645.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=PUW38_18570;product=heat shock chaperone IbpA;protein_id=WJG80645.1;transl_table=11 CP118116.1 Genbank gene 3813959 3814387 . + . ID=gene-PUW38_18575;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=PUW38_18575 CP118116.1 Protein Homology CDS 3813959 3814387 . + 0 ID=cds-WJG80646.1;Parent=gene-PUW38_18575;Dbxref=NCBI_GP:WJG80646.1;Name=WJG80646.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=PUW38_18575;product=heat shock chaperone IbpB;protein_id=WJG80646.1;transl_table=11 CP118116.1 Genbank gene 3814575 3816551 . + . ID=gene-PUW38_18580;Name=PUW38_18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18580 CP118116.1 Protein Homology CDS 3814575 3816551 . + 0 ID=cds-WJG80647.1;Parent=gene-PUW38_18580;Dbxref=NCBI_GP:WJG80647.1;Name=WJG80647.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF003007.0;locus_tag=PUW38_18580;product=putative transporter;protein_id=WJG80647.1;transl_table=11 CP118116.1 Genbank gene 3816671 3817018 . + . ID=gene-PUW38_18585;Name=PUW38_18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18585 CP118116.1 Protein Homology CDS 3816671 3817018 . + 0 ID=cds-WJG80648.1;Parent=gene-PUW38_18585;Dbxref=NCBI_GP:WJG80648.1;Name=WJG80648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=PUW38_18585;product=YidH family protein;protein_id=WJG80648.1;transl_table=11 CP118116.1 Genbank gene 3817008 3817370 . + . ID=gene-PUW38_18590;Name=PUW38_18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18590 CP118116.1 Protein Homology CDS 3817008 3817370 . + 0 ID=cds-WJG80649.1;Parent=gene-PUW38_18590;Dbxref=NCBI_GP:WJG80649.1;Name=WJG80649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=PUW38_18590;product=DUF202 domain-containing protein;protein_id=WJG80649.1;transl_table=11 CP118116.1 Genbank gene 3817367 3817897 . + . ID=gene-PUW38_18595;Name=PUW38_18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18595 CP118116.1 Protein Homology CDS 3817367 3817897 . + 0 ID=cds-WJG80650.1;Parent=gene-PUW38_18595;Dbxref=NCBI_GP:WJG80650.1;Name=WJG80650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=PUW38_18595;product=radical SAM protein;protein_id=WJG80650.1;transl_table=11 CP118116.1 Genbank gene 3817979 3819301 . - . ID=gene-PUW38_18600;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=PUW38_18600 CP118116.1 Protein Homology CDS 3817979 3819301 . - 0 ID=cds-WJG80651.1;Parent=gene-PUW38_18600;Dbxref=NCBI_GP:WJG80651.1;Name=WJG80651.1;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=PUW38_18600;product=D-serine ammonia-lyase;protein_id=WJG80651.1;transl_table=11 CP118116.1 Genbank gene 3819319 3820656 . - . ID=gene-PUW38_18605;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=PUW38_18605 CP118116.1 Protein Homology CDS 3819319 3820656 . - 0 ID=cds-WJG80652.1;Parent=gene-PUW38_18605;Dbxref=NCBI_GP:WJG80652.1;Name=WJG80652.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=PUW38_18605;product=D-serine transporter DsdX;protein_id=WJG80652.1;transl_table=11 CP118116.1 Genbank gene 3820882 3821805 . + . ID=gene-PUW38_18610;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=PUW38_18610 CP118116.1 Protein Homology CDS 3820882 3821805 . + 0 ID=cds-WJG83288.1;Parent=gene-PUW38_18610;Dbxref=NCBI_GP:WJG83288.1;Name=WJG83288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=PUW38_18610;product=DNA-binding transcriptional regulator DsdC;protein_id=WJG83288.1;transl_table=11 CP118116.1 Genbank pseudogene 3821869 3822953 . + . ID=gene-PUW38_18615;Name=PUW38_18615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18615;pseudo=true CP118116.1 Protein Homology CDS 3821869 3822953 . + 0 ID=cds-PUW38_18615;Parent=gene-PUW38_18615;Note=frameshifted;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=PUW38_18615;product=cellulase family glycosylhydrolase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3822880 3824064 . - . ID=gene-PUW38_18620;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=PUW38_18620 CP118116.1 Protein Homology CDS 3822880 3824064 . - 0 ID=cds-WJG80653.1;Parent=gene-PUW38_18620;Dbxref=NCBI_GP:WJG80653.1;Name=WJG80653.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=PUW38_18620;product=multidrug efflux MFS transporter EmrD;protein_id=WJG80653.1;transl_table=11 CP118116.1 Genbank gene 3824267 3825127 . - . ID=gene-PUW38_18625;Name=PUW38_18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18625 CP118116.1 Protein Homology CDS 3824267 3825127 . - 0 ID=cds-WJG80654.1;Parent=gene-PUW38_18625;Dbxref=NCBI_GP:WJG80654.1;Name=WJG80654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=PUW38_18625;product=DMT family transporter;protein_id=WJG80654.1;transl_table=11 CP118116.1 Genbank gene 3825220 3825309 . - . ID=gene-PUW38_18630;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=PUW38_18630 CP118116.1 Protein Homology CDS 3825220 3825309 . - 0 ID=cds-WJG80655.1;Parent=gene-PUW38_18630;Dbxref=NCBI_GP:WJG80655.1;Name=WJG80655.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=PUW38_18630;product=type I toxin-antitoxin system toxin TisB;protein_id=WJG80655.1;transl_table=11 CP118116.1 Genbank pseudogene 3825306 3825420 . - . ID=gene-PUW38_18635;Name=PUW38_18635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18635;pseudo=true CP118116.1 Protein Homology CDS 3825306 3825420 . - 0 ID=cds-PUW38_18635;Parent=gene-PUW38_18635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=PUW38_18635;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3825943 3826041 . + . ID=gene-PUW38_18640;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=PUW38_18640 CP118116.1 Protein Homology CDS 3825943 3826041 . + 0 ID=cds-WJG80656.1;Parent=gene-PUW38_18640;Dbxref=NCBI_GP:WJG80656.1;Name=WJG80656.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=PUW38_18640;product=ilvB operon leader peptide IvbL;protein_id=WJG80656.1;transl_table=11 CP118116.1 Genbank pseudogene 3826148 3827834 . + . ID=gene-PUW38_18645;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=pseudogene;locus_tag=PUW38_18645;pseudo=true CP118116.1 Protein Homology CDS 3826148 3827834 . + 0 ID=cds-PUW38_18645;Parent=gene-PUW38_18645;Note=frameshifted;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=PUW38_18645;product=acetolactate synthase large subunit;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3827838 3828128 . + . ID=gene-PUW38_18650;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PUW38_18650 CP118116.1 Protein Homology CDS 3827838 3828128 . + 0 ID=cds-WJG80657.1;Parent=gene-PUW38_18650;Dbxref=NCBI_GP:WJG80657.1;Name=WJG80657.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=PUW38_18650;product=acetolactate synthase small subunit;protein_id=WJG80657.1;transl_table=11 CP118116.1 Genbank pseudogene 3828130 3828914 . - . ID=gene-PUW38_18655;Name=PUW38_18655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18655;pseudo=true CP118116.1 Protein Homology CDS 3828130 3828914 . - 0 ID=cds-PUW38_18655;Parent=gene-PUW38_18655;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=PUW38_18655;product=DeoR family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3829239 3830159 . + . ID=gene-PUW38_18660;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=PUW38_18660 CP118116.1 Protein Homology CDS 3829239 3830159 . + 0 ID=cds-WJG80658.1;Parent=gene-PUW38_18660;Dbxref=NCBI_GP:WJG80658.1;Name=WJG80658.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=PUW38_18660;product=ribokinase;protein_id=WJG80658.1;transl_table=11 CP118116.1 Genbank gene 3830190 3831506 . + . ID=gene-PUW38_18665;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PUW38_18665 CP118116.1 Protein Homology CDS 3830190 3831506 . + 0 ID=cds-WJG80659.1;Parent=gene-PUW38_18665;Dbxref=NCBI_GP:WJG80659.1;Name=WJG80659.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=PUW38_18665;product=L-fucose:H+ symporter permease;protein_id=WJG80659.1;transl_table=11 CP118116.1 Genbank gene 3831518 3832531 . + . ID=gene-PUW38_18670;Name=PUW38_18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18670 CP118116.1 Protein Homology CDS 3831518 3832531 . + 0 ID=cds-WJG80660.1;Parent=gene-PUW38_18670;Dbxref=NCBI_GP:WJG80660.1;Name=WJG80660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=PUW38_18670;product=aldose 1-epimerase family protein;protein_id=WJG80660.1;transl_table=11 CP118116.1 Genbank gene 3832685 3833275 . + . ID=gene-PUW38_18675;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=PUW38_18675 CP118116.1 Protein Homology CDS 3832685 3833275 . + 0 ID=cds-WJG80661.1;Parent=gene-PUW38_18675;Dbxref=NCBI_GP:WJG80661.1;Name=WJG80661.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=PUW38_18675;product=transcriptional regulator UhpA;protein_id=WJG80661.1;transl_table=11 CP118116.1 Genbank gene 3833275 3834777 . + . ID=gene-PUW38_18680;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=PUW38_18680 CP118116.1 Protein Homology CDS 3833275 3834777 . + 0 ID=cds-WJG80662.1;Parent=gene-PUW38_18680;Dbxref=NCBI_GP:WJG80662.1;Name=WJG80662.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=PUW38_18680;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WJG80662.1;transl_table=11 CP118116.1 Genbank pseudogene 3834787 3836114 . + . ID=gene-PUW38_18685;Name=PUW38_18685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18685;pseudo=true CP118116.1 Protein Homology CDS 3834787 3836114 . + 0 ID=cds-PUW38_18685;Parent=gene-PUW38_18685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=PUW38_18685;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3836257 3837636 . + . ID=gene-PUW38_18690;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=PUW38_18690 CP118116.1 Protein Homology CDS 3836257 3837636 . + 0 ID=cds-WJG80663.1;Parent=gene-PUW38_18690;Dbxref=NCBI_GP:WJG80663.1;Name=WJG80663.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=PUW38_18690;product=hexose-6-phosphate:phosphate antiporter;protein_id=WJG80663.1;transl_table=11 CP118116.1 Genbank gene 3837829 3838281 . + . ID=gene-PUW38_18695;Name=PUW38_18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18695 CP118116.1 Protein Homology CDS 3837829 3838281 . + 0 ID=cds-WJG80664.1;Parent=gene-PUW38_18695;Dbxref=NCBI_GP:WJG80664.1;Name=WJG80664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=PUW38_18695;product=DUF1198 domain-containing protein;protein_id=WJG80664.1;transl_table=11 CP118116.1 Genbank gene 3838714 3839037 . - . ID=gene-PUW38_18700;Name=PUW38_18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18700 CP118116.1 Protein Homology CDS 3838714 3839037 . - 0 ID=cds-WJG80665.1;Parent=gene-PUW38_18700;Dbxref=NCBI_GP:WJG80665.1;Name=WJG80665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=PUW38_18700;product=DNA-binding transcriptional regulator;protein_id=WJG80665.1;transl_table=11 CP118116.1 Genbank gene 3839021 3839380 . - . ID=gene-PUW38_18705;Name=PUW38_18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18705 CP118116.1 Protein Homology CDS 3839021 3839380 . - 0 ID=cds-WJG80666.1;Parent=gene-PUW38_18705;Dbxref=NCBI_GP:WJG80666.1;Name=WJG80666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=PUW38_18705;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG80666.1;transl_table=11 CP118116.1 Genbank gene 3839596 3840789 . + . ID=gene-PUW38_18710;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=PUW38_18710 CP118116.1 Protein Homology CDS 3839596 3840789 . + 0 ID=cds-WJG80667.1;Parent=gene-PUW38_18710;Dbxref=NCBI_GP:WJG80667.1;Name=WJG80667.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=PUW38_18710;product=purine ribonucleoside efflux pump NepI;protein_id=WJG80667.1;transl_table=11 CP118116.1 Genbank gene 3840849 3842231 . - . ID=gene-PUW38_18715;Name=PUW38_18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18715 CP118116.1 Protein Homology CDS 3840849 3842231 . - 0 ID=cds-WJG80668.1;Parent=gene-PUW38_18715;Dbxref=NCBI_GP:WJG80668.1;Name=WJG80668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=PUW38_18715;product=glycoside hydrolase family 1 protein;protein_id=WJG80668.1;transl_table=11 CP118116.1 Genbank gene 3842337 3842630 . - . ID=gene-PUW38_18720;Name=PUW38_18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18720 CP118116.1 Protein Homology CDS 3842337 3842630 . - 0 ID=cds-WJG80669.1;Parent=gene-PUW38_18720;Dbxref=NCBI_GP:WJG80669.1;Name=WJG80669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=PUW38_18720;product=hypothetical protein;protein_id=WJG80669.1;transl_table=11 CP118116.1 Genbank gene 3842827 3845625 . + . ID=gene-PUW38_18725;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=PUW38_18725 CP118116.1 Protein Homology CDS 3842827 3845625 . + 0 ID=cds-WJG80670.1;Parent=gene-PUW38_18725;Dbxref=NCBI_GP:WJG80670.1;Name=WJG80670.1;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=PUW38_18725;product=transcriptional regulator DagR;protein_id=WJG80670.1;transl_table=11 CP118116.1 Genbank gene 3845844 3846269 . + . ID=gene-PUW38_18730;Name=PUW38_18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18730 CP118116.1 Protein Homology CDS 3845844 3846269 . + 0 ID=cds-WJG80671.1;Parent=gene-PUW38_18730;Dbxref=NCBI_GP:WJG80671.1;Name=WJG80671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=PUW38_18730;product=PTS sugar transporter subunit IIA;protein_id=WJG80671.1;transl_table=11 CP118116.1 Genbank gene 3846280 3846765 . + . ID=gene-PUW38_18735;Name=PUW38_18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18735 CP118116.1 Protein Homology CDS 3846280 3846765 . + 0 ID=cds-WJG80672.1;Parent=gene-PUW38_18735;Dbxref=NCBI_GP:WJG80672.1;Name=WJG80672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=PUW38_18735;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WJG80672.1;transl_table=11 CP118116.1 Genbank gene 3846911 3847660 . + . ID=gene-PUW38_18740;Name=PUW38_18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18740 CP118116.1 Protein Homology CDS 3846911 3847660 . + 0 ID=cds-WJG80673.1;Parent=gene-PUW38_18740;Dbxref=NCBI_GP:WJG80673.1;Name=WJG80673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=PUW38_18740;product=PTS sugar transporter subunit IIC;protein_id=WJG80673.1;transl_table=11 CP118116.1 Genbank gene 3847657 3848517 . + . ID=gene-PUW38_18745;Name=PUW38_18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18745 CP118116.1 Protein Homology CDS 3847657 3848517 . + 0 ID=cds-WJG80674.1;Parent=gene-PUW38_18745;Dbxref=NCBI_GP:WJG80674.1;Name=WJG80674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=PUW38_18745;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WJG80674.1;transl_table=11 CP118116.1 Genbank gene 3848521 3849630 . + . ID=gene-PUW38_18750;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=PUW38_18750 CP118116.1 Protein Homology CDS 3848521 3849630 . + 0 ID=cds-WJG80675.1;Parent=gene-PUW38_18750;Dbxref=NCBI_GP:WJG80675.1;Name=WJG80675.1;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=PUW38_18750;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WJG80675.1;transl_table=11 CP118116.1 Genbank pseudogene 3849617 3850359 . + . ID=gene-PUW38_18755;Name=PUW38_18755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18755;pseudo=true CP118116.1 Protein Homology CDS 3849617 3850359 . + 0 ID=cds-PUW38_18755;Parent=gene-PUW38_18755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=PUW38_18755;product=2-dehydro-3-deoxy-phosphogluconate aldolase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3850595 3851536 . + . ID=gene-PUW38_18760;Name=PUW38_18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18760 CP118116.1 Protein Homology CDS 3850595 3851536 . + 0 ID=cds-WJG80676.1;Parent=gene-PUW38_18760;Dbxref=NCBI_GP:WJG80676.1;Name=WJG80676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=PUW38_18760;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG80676.1;transl_table=11 CP118116.1 Genbank pseudogene 3851579 3852473 . - . ID=gene-PUW38_18765;Name=PUW38_18765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18765;pseudo=true CP118116.1 Protein Homology CDS 3851579 3852473 . - 0 ID=cds-PUW38_18765;Parent=gene-PUW38_18765;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=PUW38_18765;product=EamA family transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3852985 3853680 . + . ID=gene-PUW38_18770;Name=PUW38_18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18770 CP118116.1 Protein Homology CDS 3852985 3853680 . + 0 ID=cds-WJG80677.1;Parent=gene-PUW38_18770;Dbxref=NCBI_GP:WJG80677.1;Name=WJG80677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=PUW38_18770;product=MgtC family protein;protein_id=WJG80677.1;transl_table=11 CP118116.1 Genbank gene 3853900 3856626 . + . ID=gene-PUW38_18775;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PUW38_18775 CP118116.1 Protein Homology CDS 3853900 3856626 . + 0 ID=cds-WJG80678.1;Parent=gene-PUW38_18775;Dbxref=NCBI_GP:WJG80678.1;Name=WJG80678.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=PUW38_18775;product=magnesium-translocating P-type ATPase;protein_id=WJG80678.1;transl_table=11 CP118116.1 Genbank gene 3856648 3856740 . + . ID=gene-PUW38_18780;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=PUW38_18780 CP118116.1 Protein Homology CDS 3856648 3856740 . + 0 ID=cds-WJG80679.1;Parent=gene-PUW38_18780;Dbxref=NCBI_GP:WJG80679.1;Name=WJG80679.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=PUW38_18780;product=protein MgtR;protein_id=WJG80679.1;transl_table=11 CP118116.1 Genbank gene 3856753 3856839 . + . ID=gene-PUW38_18785;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=PUW38_18785 CP118116.1 Protein Homology CDS 3856753 3856839 . + 0 ID=cds-WJG83289.1;Parent=gene-PUW38_18785;Dbxref=NCBI_GP:WJG83289.1;Name=WJG83289.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=PUW38_18785;product=magnesium transporter protection protein MgtU;protein_id=WJG83289.1;transl_table=11 CP118116.1 Genbank gene 3856941 3857378 . + . ID=gene-PUW38_18790;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=PUW38_18790 CP118116.1 Protein Homology CDS 3856941 3857378 . + 0 ID=cds-WJG80680.1;Parent=gene-PUW38_18790;Dbxref=NCBI_GP:WJG80680.1;Name=WJG80680.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210795.1;locus_tag=PUW38_18790;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WJG80680.1;transl_table=11 CP118116.1 Genbank gene 3857546 3858226 . - . ID=gene-PUW38_18795;Name=PUW38_18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18795 CP118116.1 Protein Homology CDS 3857546 3858226 . - 0 ID=cds-WJG80681.1;Parent=gene-PUW38_18795;Dbxref=NCBI_GP:WJG80681.1;Name=WJG80681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=PUW38_18795;product=isochorismatase family protein;protein_id=WJG80681.1;transl_table=11 CP118116.1 Genbank pseudogene 3859010 3859866 . + . ID=gene-PUW38_18800;Name=PUW38_18800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18800;pseudo=true CP118116.1 Protein Homology CDS 3859010 3859866 . + 0 ID=cds-PUW38_18800;Parent=gene-PUW38_18800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=PUW38_18800;product=transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3859877 3860341 . + . ID=gene-PUW38_18805;Name=PUW38_18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18805 CP118116.1 Protein Homology CDS 3859877 3860341 . + 0 ID=cds-WJG83290.1;Parent=gene-PUW38_18805;Dbxref=NCBI_GP:WJG83290.1;Name=WJG83290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=PUW38_18805;product=hypothetical protein;protein_id=WJG83290.1;transl_table=11 CP118116.1 Genbank gene 3860436 3863303 . - . ID=gene-PUW38_18810;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=PUW38_18810 CP118116.1 Protein Homology CDS 3860436 3863303 . - 0 ID=cds-WJG80682.1;Parent=gene-PUW38_18810;Dbxref=NCBI_GP:WJG80682.1;Name=WJG80682.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=PUW38_18810;product=intestinal colonization autotransporter adhesin MisL;protein_id=WJG80682.1;transl_table=11 CP118116.1 Genbank gene 3863378 3863995 . - . ID=gene-PUW38_18815;Name=PUW38_18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18815 CP118116.1 Protein Homology CDS 3863378 3863995 . - 0 ID=cds-WJG80683.1;Parent=gene-PUW38_18815;Dbxref=NCBI_GP:WJG80683.1;Name=WJG80683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=PUW38_18815;product=helix-turn-helix transcriptional regulator;protein_id=WJG80683.1;transl_table=11 CP118116.1 Genbank pseudogene 3865009 3865140 . + . ID=gene-PUW38_18820;Name=PUW38_18820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18820;pseudo=true CP118116.1 Protein Homology CDS 3865009 3865140 . + 0 ID=cds-PUW38_18820;Parent=gene-PUW38_18820;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=PUW38_18820;product=transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3865294 3866331 . - . ID=gene-PUW38_18825;Name=PUW38_18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18825 CP118116.1 Protein Homology CDS 3865294 3866331 . - 0 ID=cds-WJG80684.1;Parent=gene-PUW38_18825;Dbxref=NCBI_GP:WJG80684.1;Name=WJG80684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=PUW38_18825;product=virulence RhuM family protein;protein_id=WJG80684.1;transl_table=11 CP118116.1 Genbank pseudogene 3866419 3866835 . - . ID=gene-PUW38_18830;Name=PUW38_18830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18830;pseudo=true CP118116.1 Protein Homology CDS 3866419 3866835 . - 0 ID=cds-PUW38_18830;Parent=gene-PUW38_18830;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=PUW38_18830;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3866865 3868050 . - . ID=gene-PUW38_18835;Name=PUW38_18835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18835;pseudo=true CP118116.1 Protein Homology CDS 3866865 3868050 . - 0 ID=cds-PUW38_18835;Parent=gene-PUW38_18835;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462652.1;locus_tag=PUW38_18835;product=AAA family ATPase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3868167 3868295 . - . ID=gene-PUW38_18840;Name=PUW38_18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18840 CP118116.1 Protein Homology CDS 3868167 3868295 . - 0 ID=cds-WJG83291.1;Parent=gene-PUW38_18840;Dbxref=NCBI_GP:WJG83291.1;Name=WJG83291.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018465.2;locus_tag=PUW38_18840;product=toxin;protein_id=WJG83291.1;transl_table=11 CP118116.1 Genbank gene 3868740 3869084 . + . ID=gene-PUW38_18845;Name=PUW38_18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18845 CP118116.1 Protein Homology CDS 3868740 3869084 . + 0 ID=cds-WJG80685.1;Parent=gene-PUW38_18845;Dbxref=NCBI_GP:WJG80685.1;Name=WJG80685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=PUW38_18845;product=hypothetical protein;protein_id=WJG80685.1;transl_table=11 CP118116.1 Genbank gene 3869401 3869495 . - . ID=gene-PUW38_18850;Name=PUW38_18850;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_18850 CP118116.1 tRNAscan-SE tRNA 3869401 3869495 . - . ID=rna-PUW38_18850;Parent=gene-PUW38_18850;anticodon=(pos:complement(3869459..3869461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18850;product=tRNA-Sec CP118116.1 tRNAscan-SE exon 3869401 3869495 . - . ID=exon-PUW38_18850-1;Parent=rna-PUW38_18850;anticodon=(pos:complement(3869459..3869461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_18850;product=tRNA-Sec CP118116.1 Genbank pseudogene 3869783 3871164 . + . ID=gene-PUW38_18855;Name=PUW38_18855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_18855;pseudo=true CP118116.1 Protein Homology CDS 3869783 3871164 . + 0 ID=cds-PUW38_18855;Parent=gene-PUW38_18855;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=PUW38_18855;product=glycoside-pentoside-hexuronide family transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3871176 3873494 . + . ID=gene-PUW38_18860;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=PUW38_18860 CP118116.1 Protein Homology CDS 3871176 3873494 . + 0 ID=cds-WJG80686.1;Parent=gene-PUW38_18860;Dbxref=NCBI_GP:WJG80686.1;Name=WJG80686.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=PUW38_18860;product=alpha-xylosidase;protein_id=WJG80686.1;transl_table=11 CP118116.1 Genbank gene 3873597 3875306 . - . ID=gene-PUW38_18865;Name=PUW38_18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18865 CP118116.1 Protein Homology CDS 3873597 3875306 . - 0 ID=cds-WJG80687.1;Parent=gene-PUW38_18865;Dbxref=NCBI_GP:WJG80687.1;Name=WJG80687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=PUW38_18865;product=AsmA family protein;protein_id=WJG80687.1;transl_table=11 CP118116.1 Genbank gene 3875427 3876818 . - . ID=gene-PUW38_18870;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=PUW38_18870 CP118116.1 Protein Homology CDS 3875427 3876818 . - 0 ID=cds-WJG80688.1;Parent=gene-PUW38_18870;Dbxref=NCBI_GP:WJG80688.1;Name=WJG80688.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=PUW38_18870;product=xanthine/proton symporter XanP;protein_id=WJG80688.1;transl_table=11 CP118116.1 Genbank gene 3877046 3878251 . + . ID=gene-PUW38_18875;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=PUW38_18875 CP118116.1 Protein Homology CDS 3877046 3878251 . + 0 ID=cds-WJG80689.1;Parent=gene-PUW38_18875;Dbxref=NCBI_GP:WJG80689.1;Name=WJG80689.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=PUW38_18875;product=sodium/glutamate symporter;protein_id=WJG80689.1;transl_table=11 CP118116.1 Genbank gene 3878287 3880368 . - . ID=gene-PUW38_18880;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=PUW38_18880 CP118116.1 Protein Homology CDS 3878287 3880368 . - 0 ID=cds-WJG80690.1;Parent=gene-PUW38_18880;Dbxref=NCBI_GP:WJG80690.1;Name=WJG80690.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=PUW38_18880;product=ATP-dependent DNA helicase RecG;protein_id=WJG80690.1;transl_table=11 CP118116.1 Genbank gene 3880374 3881063 . - . ID=gene-PUW38_18885;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=PUW38_18885 CP118116.1 Protein Homology CDS 3880374 3881063 . - 0 ID=cds-WJG80691.1;Parent=gene-PUW38_18885;Dbxref=NCBI_GP:WJG80691.1;Name=WJG80691.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=PUW38_18885;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WJG80691.1;transl_table=11 CP118116.1 Genbank gene 3881068 3883179 . - . ID=gene-PUW38_18890;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=PUW38_18890 CP118116.1 Protein Homology CDS 3881068 3883179 . - 0 ID=cds-WJG80692.1;Parent=gene-PUW38_18890;Dbxref=NCBI_GP:WJG80692.1;Name=WJG80692.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=PUW38_18890;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WJG80692.1;transl_table=11 CP118116.1 Genbank gene 3883198 3883473 . - . ID=gene-PUW38_18895;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=PUW38_18895 CP118116.1 Protein Homology CDS 3883198 3883473 . - 0 ID=cds-WJG80693.1;Parent=gene-PUW38_18895;Dbxref=NCBI_GP:WJG80693.1;Name=WJG80693.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=PUW38_18895;product=DNA-directed RNA polymerase subunit omega;protein_id=WJG80693.1;transl_table=11 CP118116.1 Genbank pseudogene 3883528 3884150 . - . ID=gene-PUW38_18900;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=pseudogene;locus_tag=PUW38_18900;pseudo=true CP118116.1 Protein Homology CDS 3883528 3884150 . - 0 ID=cds-PUW38_18900;Parent=gene-PUW38_18900;Note=frameshifted;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=PUW38_18900;product=guanylate kinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3884407 3886092 . + . ID=gene-PUW38_18905;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=PUW38_18905 CP118116.1 Protein Homology CDS 3884407 3886092 . + 0 ID=cds-WJG80694.1;Parent=gene-PUW38_18905;Dbxref=NCBI_GP:WJG80694.1;Name=WJG80694.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=PUW38_18905;product=NAD-dependent DNA ligase LigB;protein_id=WJG80694.1;transl_table=11 CP118116.1 Genbank gene 3886089 3886706 . - . ID=gene-PUW38_18910;Name=PUW38_18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18910 CP118116.1 Protein Homology CDS 3886089 3886706 . - 0 ID=cds-WJG80695.1;Parent=gene-PUW38_18910;Dbxref=NCBI_GP:WJG80695.1;Name=WJG80695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=PUW38_18910;product=trimeric intracellular cation channel family protein;protein_id=WJG80695.1;transl_table=11 CP118116.1 Genbank gene 3886956 3887837 . - . ID=gene-PUW38_18915;Name=PUW38_18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18915 CP118116.1 Protein Homology CDS 3886956 3887837 . - 0 ID=cds-WJG80696.1;Parent=gene-PUW38_18915;Dbxref=NCBI_GP:WJG80696.1;Name=WJG80696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=PUW38_18915;product=HARLDQ motif MBL-fold protein;protein_id=WJG80696.1;transl_table=11 CP118116.1 Genbank gene 3887911 3888813 . + . ID=gene-PUW38_18920;Name=PUW38_18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18920 CP118116.1 Protein Homology CDS 3887911 3888813 . + 0 ID=cds-WJG80697.1;Parent=gene-PUW38_18920;Dbxref=NCBI_GP:WJG80697.1;Name=WJG80697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=PUW38_18920;product=LysR family transcriptional regulator;protein_id=WJG80697.1;transl_table=11 CP118116.1 Genbank gene 3888863 3889726 . - . ID=gene-PUW38_18925;Name=PUW38_18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18925 CP118116.1 Protein Homology CDS 3888863 3889726 . - 0 ID=cds-WJG80698.1;Parent=gene-PUW38_18925;Dbxref=NCBI_GP:WJG80698.1;Name=WJG80698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=PUW38_18925;product=YicC family protein;protein_id=WJG80698.1;transl_table=11 CP118116.1 Genbank gene 3889852 3890568 . + . ID=gene-PUW38_18930;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=PUW38_18930 CP118116.1 Protein Homology CDS 3889852 3890568 . + 0 ID=cds-WJG80699.1;Parent=gene-PUW38_18930;Dbxref=NCBI_GP:WJG80699.1;Name=WJG80699.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=PUW38_18930;product=ribonuclease PH;protein_id=WJG80699.1;transl_table=11 CP118116.1 Genbank gene 3890647 3891288 . + . ID=gene-PUW38_18935;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=PUW38_18935 CP118116.1 Protein Homology CDS 3890647 3891288 . + 0 ID=cds-WJG80700.1;Parent=gene-PUW38_18935;Dbxref=NCBI_GP:WJG80700.1;Name=WJG80700.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=PUW38_18935;product=orotate phosphoribosyltransferase;protein_id=WJG80700.1;transl_table=11 CP118116.1 Genbank gene 3891366 3891962 . - . ID=gene-PUW38_18940;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=PUW38_18940 CP118116.1 Protein Homology CDS 3891366 3891962 . - 0 ID=cds-WJG80701.1;Parent=gene-PUW38_18940;Dbxref=NCBI_GP:WJG80701.1;Name=WJG80701.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=PUW38_18940;product=nucleoid occlusion factor SlmA;protein_id=WJG80701.1;transl_table=11 CP118116.1 Genbank gene 3892070 3892528 . - . ID=gene-PUW38_18945;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=PUW38_18945 CP118116.1 Protein Homology CDS 3892070 3892528 . - 0 ID=cds-WJG80702.1;Parent=gene-PUW38_18945;Dbxref=NCBI_GP:WJG80702.1;Name=WJG80702.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=PUW38_18945;product=dUTP diphosphatase;protein_id=WJG80702.1;transl_table=11 CP118116.1 Genbank gene 3892506 3893726 . - . ID=gene-PUW38_18950;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=PUW38_18950 CP118116.1 Protein Homology CDS 3892506 3893726 . - 0 ID=cds-WJG83292.1;Parent=gene-PUW38_18950;Dbxref=NCBI_GP:WJG83292.1;Name=WJG83292.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=PUW38_18950;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WJG83292.1;transl_table=11 CP118116.1 Genbank gene 3893902 3894567 . + . ID=gene-PUW38_18955;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PUW38_18955 CP118116.1 Protein Homology CDS 3893902 3894567 . + 0 ID=cds-WJG80703.1;Parent=gene-PUW38_18955;Dbxref=NCBI_GP:WJG80703.1;Name=WJG80703.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=PUW38_18955;product=DNA repair protein RadC;protein_id=WJG80703.1;transl_table=11 CP118116.1 Genbank gene 3894785 3895021 . + . ID=gene-PUW38_18960;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=PUW38_18960 CP118116.1 Protein Homology CDS 3894785 3895021 . + 0 ID=cds-WJG80704.1;Parent=gene-PUW38_18960;Dbxref=NCBI_GP:WJG80704.1;Name=WJG80704.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=PUW38_18960;product=50S ribosomal protein L28;protein_id=WJG80704.1;transl_table=11 CP118116.1 Genbank gene 3895042 3895209 . + . ID=gene-PUW38_18965;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PUW38_18965 CP118116.1 Protein Homology CDS 3895042 3895209 . + 0 ID=cds-WJG80705.1;Parent=gene-PUW38_18965;Dbxref=NCBI_GP:WJG80705.1;Name=WJG80705.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=PUW38_18965;product=50S ribosomal protein L33;protein_id=WJG80705.1;transl_table=11 CP118116.1 Genbank gene 3895307 3896116 . + . ID=gene-PUW38_18970;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=PUW38_18970 CP118116.1 Protein Homology CDS 3895307 3896116 . + 0 ID=cds-WJG80706.1;Parent=gene-PUW38_18970;Dbxref=NCBI_GP:WJG80706.1;Name=WJG80706.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=PUW38_18970;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WJG80706.1;transl_table=11 CP118116.1 Genbank gene 3896144 3896623 . - . ID=gene-PUW38_18975;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=PUW38_18975 CP118116.1 Protein Homology CDS 3896144 3896623 . - 0 ID=cds-WJG80707.1;Parent=gene-PUW38_18975;Dbxref=NCBI_GP:WJG80707.1;Name=WJG80707.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=PUW38_18975;product=pantetheine-phosphate adenylyltransferase;protein_id=WJG80707.1;transl_table=11 CP118116.1 Genbank gene 3896632 3897909 . - . ID=gene-PUW38_18980;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=PUW38_18980 CP118116.1 Protein Homology CDS 3896632 3897909 . - 0 ID=cds-WJG80708.1;Parent=gene-PUW38_18980;Dbxref=NCBI_GP:WJG80708.1;Name=WJG80708.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=PUW38_18980;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WJG80708.1;transl_table=11 CP118116.1 Genbank gene 3898318 3899388 . + . ID=gene-PUW38_18985;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=PUW38_18985 CP118116.1 Protein Homology CDS 3898318 3899388 . + 0 ID=cds-WJG80709.1;Parent=gene-PUW38_18985;Dbxref=NCBI_GP:WJG80709.1;Name=WJG80709.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=PUW38_18985;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WJG80709.1;transl_table=11 CP118116.1 Genbank gene 3899385 3900509 . + . ID=gene-PUW38_18990;Name=PUW38_18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_18990 CP118116.1 Protein Homology CDS 3899385 3900509 . + 0 ID=cds-WJG80710.1;Parent=gene-PUW38_18990;Dbxref=NCBI_GP:WJG80710.1;Name=WJG80710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=PUW38_18990;product=glycosyltransferase family 4 protein;protein_id=WJG80710.1;transl_table=11 CP118116.1 Genbank gene 3900502 3901299 . + . ID=gene-PUW38_18995;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=PUW38_18995 CP118116.1 Protein Homology CDS 3900502 3901299 . + 0 ID=cds-WJG80711.1;Parent=gene-PUW38_18995;Dbxref=NCBI_GP:WJG80711.1;Name=WJG80711.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=PUW38_18995;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WJG80711.1;transl_table=11 CP118116.1 Genbank gene 3901355 3901564 . + . ID=gene-PUW38_19000;Name=PUW38_19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19000 CP118116.1 GeneMarkS-2+ CDS 3901355 3901564 . + 0 ID=cds-WJG80712.1;Parent=gene-PUW38_19000;Dbxref=NCBI_GP:WJG80712.1;Name=WJG80712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_19000;product=hypothetical protein;protein_id=WJG80712.1;transl_table=11 CP118116.1 Genbank gene 3901634 3902713 . + . ID=gene-PUW38_19005;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=PUW38_19005 CP118116.1 Protein Homology CDS 3901634 3902713 . + 0 ID=cds-WJG80713.1;Parent=gene-PUW38_19005;Dbxref=NCBI_GP:WJG80713.1;Name=WJG80713.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=PUW38_19005;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WJG80713.1;transl_table=11 CP118116.1 Genbank gene 3902719 3903732 . + . ID=gene-PUW38_19010;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=PUW38_19010 CP118116.1 Protein Homology CDS 3902719 3903732 . + 0 ID=cds-WJG80714.1;Parent=gene-PUW38_19010;Dbxref=NCBI_GP:WJG80714.1;Name=WJG80714.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=PUW38_19010;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WJG80714.1;transl_table=11 CP118116.1 Genbank gene 3903750 3904763 . + . ID=gene-PUW38_19015;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=PUW38_19015 CP118116.1 Protein Homology CDS 3903750 3904763 . + 0 ID=cds-WJG80715.1;Parent=gene-PUW38_19015;Dbxref=NCBI_GP:WJG80715.1;Name=WJG80715.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=PUW38_19015;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WJG80715.1;transl_table=11 CP118116.1 Genbank gene 3904786 3905484 . + . ID=gene-PUW38_19020;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=PUW38_19020 CP118116.1 Protein Homology CDS 3904786 3905484 . + 0 ID=cds-WJG80716.1;Parent=gene-PUW38_19020;Dbxref=NCBI_GP:WJG80716.1;Name=WJG80716.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=PUW38_19020;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WJG80716.1;transl_table=11 CP118116.1 Genbank pseudogene 3905634 3906442 . + . ID=gene-PUW38_19025;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=pseudogene;locus_tag=PUW38_19025;pseudo=true CP118116.1 Protein Homology CDS 3905634 3906442 . + 0 ID=cds-PUW38_19025;Parent=gene-PUW38_19025;Note=frameshifted;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=PUW38_19025;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3906542 3907687 . + . ID=gene-PUW38_19030;Name=PUW38_19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19030 CP118116.1 Protein Homology CDS 3906542 3907687 . + 0 ID=cds-WJG80717.1;Parent=gene-PUW38_19030;Dbxref=NCBI_GP:WJG80717.1;Name=WJG80717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=PUW38_19030;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WJG80717.1;transl_table=11 CP118116.1 Genbank pseudogene 3907745 3908958 . - . ID=gene-PUW38_19035;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=pseudogene;locus_tag=PUW38_19035;pseudo=true CP118116.1 Protein Homology CDS 3907745 3908958 . - 0 ID=cds-PUW38_19035;Parent=gene-PUW38_19035;Note=frameshifted;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=PUW38_19035;product=O-antigen ligase RfaL;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3908998 3909951 . - . ID=gene-PUW38_19040;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=PUW38_19040 CP118116.1 Protein Homology CDS 3908998 3909951 . - 0 ID=cds-WJG80718.1;Parent=gene-PUW38_19040;Dbxref=NCBI_GP:WJG80718.1;Name=WJG80718.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=PUW38_19040;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WJG80718.1;transl_table=11 CP118116.1 Genbank gene 3909951 3910997 . - . ID=gene-PUW38_19045;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=PUW38_19045 CP118116.1 Protein Homology CDS 3909951 3910997 . - 0 ID=cds-WJG80719.1;Parent=gene-PUW38_19045;Dbxref=NCBI_GP:WJG80719.1;Name=WJG80719.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=PUW38_19045;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WJG80719.1;transl_table=11 CP118116.1 Genbank gene 3911000 3911932 . - . ID=gene-PUW38_19050;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=PUW38_19050 CP118116.1 Protein Homology CDS 3911000 3911932 . - 0 ID=cds-WJG80720.1;Parent=gene-PUW38_19050;Dbxref=NCBI_GP:WJG80720.1;Name=WJG80720.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=PUW38_19050;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WJG80720.1;transl_table=11 CP118116.1 Genbank pseudogene 3912135 3913330 . + . ID=gene-PUW38_19055;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=pseudogene;locus_tag=PUW38_19055;pseudo=true CP118116.1 Protein Homology CDS 3912135 3913330 . + 0 ID=cds-PUW38_19055;Parent=gene-PUW38_19055;Note=frameshifted;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=PUW38_19055;product=glycine C-acetyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 3913340 3914364 . + . ID=gene-PUW38_19060;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=pseudogene;locus_tag=PUW38_19060;pseudo=true CP118116.1 Protein Homology CDS 3913340 3914364 . + 0 ID=cds-PUW38_19060;Parent=gene-PUW38_19060;Note=frameshifted;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=PUW38_19060;product=L-threonine 3-dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3914658 3915692 . + . ID=gene-PUW38_19065;Name=PUW38_19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19065 CP118116.1 Protein Homology CDS 3914658 3915692 . + 0 ID=cds-WJG80721.1;Parent=gene-PUW38_19065;Dbxref=NCBI_GP:WJG80721.1;Name=WJG80721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=PUW38_19065;product=glycosyltransferase;protein_id=WJG80721.1;transl_table=11 CP118116.1 Genbank gene 3915679 3916641 . - . ID=gene-PUW38_19070;Name=PUW38_19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19070 CP118116.1 Protein Homology CDS 3915679 3916641 . - 0 ID=cds-WJG80722.1;Parent=gene-PUW38_19070;Dbxref=NCBI_GP:WJG80722.1;Name=WJG80722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=PUW38_19070;product=divergent polysaccharide deacetylase family protein;protein_id=WJG80722.1;transl_table=11 CP118116.1 Genbank gene 3916645 3917904 . - . ID=gene-PUW38_19075;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=PUW38_19075 CP118116.1 Protein Homology CDS 3916645 3917904 . - 0 ID=cds-WJG83293.1;Parent=gene-PUW38_19075;Dbxref=NCBI_GP:WJG83293.1;Name=WJG83293.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=PUW38_19075;product=murein hydrolase activator EnvC;protein_id=WJG83293.1;transl_table=11 CP118116.1 Genbank gene 3917938 3919482 . - . ID=gene-PUW38_19080;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=PUW38_19080 CP118116.1 Protein Homology CDS 3917938 3919482 . - 0 ID=cds-WJG80723.1;Parent=gene-PUW38_19080;Dbxref=NCBI_GP:WJG80723.1;Name=WJG80723.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=PUW38_19080;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WJG80723.1;transl_table=11 CP118116.1 Genbank gene 3919730 3920161 . + . ID=gene-PUW38_19085;Name=PUW38_19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19085 CP118116.1 Protein Homology CDS 3919730 3920161 . + 0 ID=cds-WJG80724.1;Parent=gene-PUW38_19085;Dbxref=NCBI_GP:WJG80724.1;Name=WJG80724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=PUW38_19085;product=rhodanese-like domain-containing protein;protein_id=WJG80724.1;transl_table=11 CP118116.1 Genbank gene 3920248 3920499 . + . ID=gene-PUW38_19090;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=PUW38_19090 CP118116.1 Protein Homology CDS 3920248 3920499 . + 0 ID=cds-WJG80725.1;Parent=gene-PUW38_19090;Dbxref=NCBI_GP:WJG80725.1;Name=WJG80725.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=PUW38_19090;product=glutaredoxin 3;protein_id=WJG80725.1;transl_table=11 CP118116.1 Genbank gene 3920543 3921010 . + . ID=gene-PUW38_19095;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=PUW38_19095 CP118116.1 Protein Homology CDS 3920543 3921010 . + 0 ID=cds-WJG80726.1;Parent=gene-PUW38_19095;Dbxref=NCBI_GP:WJG80726.1;Name=WJG80726.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=PUW38_19095;product=protein-export chaperone SecB;protein_id=WJG80726.1;transl_table=11 CP118116.1 Genbank gene 3921010 3922029 . + . ID=gene-PUW38_19100;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=PUW38_19100 CP118116.1 Protein Homology CDS 3921010 3922029 . + 0 ID=cds-WJG80727.1;Parent=gene-PUW38_19100;Dbxref=NCBI_GP:WJG80727.1;Name=WJG80727.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=PUW38_19100;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WJG80727.1;transl_table=11 CP118116.1 Genbank gene 3922107 3922928 . + . ID=gene-PUW38_19105;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=PUW38_19105 CP118116.1 Protein Homology CDS 3922107 3922928 . + 0 ID=cds-WJG80728.1;Parent=gene-PUW38_19105;Dbxref=NCBI_GP:WJG80728.1;Name=WJG80728.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=PUW38_19105;product=serine O-acetyltransferase;protein_id=WJG80728.1;transl_table=11 CP118116.1 Genbank gene 3923011 3924321 . - . ID=gene-PUW38_19110;Name=PUW38_19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19110 CP118116.1 Protein Homology CDS 3923011 3924321 . - 0 ID=cds-WJG80729.1;Parent=gene-PUW38_19110;Dbxref=NCBI_GP:WJG80729.1;Name=WJG80729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=PUW38_19110;product=MFS transporter;protein_id=WJG80729.1;transl_table=11 CP118116.1 Genbank gene 3924395 3925591 . - . ID=gene-PUW38_19115;Name=PUW38_19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19115 CP118116.1 Protein Homology CDS 3924395 3925591 . - 0 ID=cds-WJG80730.1;Parent=gene-PUW38_19115;Dbxref=NCBI_GP:WJG80730.1;Name=WJG80730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=PUW38_19115;product=L-talarate/galactarate dehydratase;protein_id=WJG80730.1;transl_table=11 CP118116.1 Genbank gene 3925910 3926914 . + . ID=gene-PUW38_19120;Name=PUW38_19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19120 CP118116.1 Protein Homology CDS 3925910 3926914 . + 0 ID=cds-WJG80731.1;Parent=gene-PUW38_19120;Dbxref=NCBI_GP:WJG80731.1;Name=WJG80731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=PUW38_19120;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG80731.1;transl_table=11 CP118116.1 Genbank gene 3926982 3927455 . - . ID=gene-PUW38_19125;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=PUW38_19125 CP118116.1 Protein Homology CDS 3926982 3927455 . - 0 ID=cds-WJG80732.1;Parent=gene-PUW38_19125;Dbxref=NCBI_GP:WJG80732.1;Name=WJG80732.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=PUW38_19125;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WJG80732.1;transl_table=11 CP118116.1 Genbank gene 3927520 3928710 . - . ID=gene-PUW38_19130;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=PUW38_19130 CP118116.1 Protein Homology CDS 3927520 3928710 . - 0 ID=cds-WJG80733.1;Parent=gene-PUW38_19130;Dbxref=NCBI_GP:WJG80733.1;Name=WJG80733.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=PUW38_19130;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WJG80733.1;transl_table=11 CP118116.1 Genbank gene 3928707 3929483 . - . ID=gene-PUW38_19135;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=PUW38_19135 CP118116.1 Protein Homology CDS 3928707 3929483 . - 0 ID=cds-WJG80734.1;Parent=gene-PUW38_19135;Dbxref=NCBI_GP:WJG80734.1;Name=WJG80734.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=PUW38_19135;product=transcriptional regulator LldR;protein_id=WJG80734.1;transl_table=11 CP118116.1 Genbank pseudogene 3929480 3931136 . - . ID=gene-PUW38_19140;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=pseudogene;locus_tag=PUW38_19140;pseudo=true CP118116.1 Protein Homology CDS 3929480 3931136 . - 0 ID=cds-PUW38_19140;Parent=gene-PUW38_19140;Note=frameshifted;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=PUW38_19140;product=L-lactate permease;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3931435 3935691 . - . ID=gene-PUW38_19145;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=PUW38_19145 CP118116.1 Protein Homology CDS 3931435 3935691 . - 0 ID=cds-WJG80735.1;Parent=gene-PUW38_19145;Dbxref=NCBI_GP:WJG80735.1;Name=WJG80735.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=PUW38_19145;product=trimeric autotransporter adhesin SadA;protein_id=WJG80735.1;transl_table=11 CP118116.1 Genbank gene 3935735 3936418 . - . ID=gene-PUW38_19150;Name=PUW38_19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19150 CP118116.1 Protein Homology CDS 3935735 3936418 . - 0 ID=cds-WJG80736.1;Parent=gene-PUW38_19150;Dbxref=NCBI_GP:WJG80736.1;Name=WJG80736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=PUW38_19150;product=DUF3251 domain-containing protein;protein_id=WJG80736.1;transl_table=11 CP118116.1 Genbank gene 3936906 3937268 . - . ID=gene-PUW38_19155;Name=PUW38_19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19155 CP118116.1 Protein Homology CDS 3936906 3937268 . - 0 ID=cds-WJG80737.1;Parent=gene-PUW38_19155;Dbxref=NCBI_GP:WJG80737.1;Name=WJG80737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=PUW38_19155;product=YibL family ribosome-associated protein;protein_id=WJG80737.1;transl_table=11 CP118116.1 Genbank gene 3937559 3937768 . + . ID=gene-PUW38_19160;Name=PUW38_19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19160 CP118116.1 Protein Homology CDS 3937559 3937768 . + 0 ID=cds-WJG80738.1;Parent=gene-PUW38_19160;Dbxref=NCBI_GP:WJG80738.1;Name=WJG80738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=PUW38_19160;product=hypothetical protein;protein_id=WJG80738.1;transl_table=11 CP118116.1 Genbank gene 3937778 3938368 . - . ID=gene-PUW38_19165;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=PUW38_19165 CP118116.1 Protein Homology CDS 3937778 3938368 . - 0 ID=cds-WJG80739.1;Parent=gene-PUW38_19165;Dbxref=NCBI_GP:WJG80739.1;Name=WJG80739.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=PUW38_19165;product=mannitol operon repressor MtlR;protein_id=WJG80739.1;transl_table=11 CP118116.1 Genbank gene 3938365 3939513 . - . ID=gene-PUW38_19170;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=PUW38_19170 CP118116.1 Protein Homology CDS 3938365 3939513 . - 0 ID=cds-WJG80740.1;Parent=gene-PUW38_19170;Dbxref=NCBI_GP:WJG80740.1;Name=WJG80740.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=PUW38_19170;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WJG80740.1;transl_table=11 CP118116.1 Genbank gene 3939734 3941650 . - . ID=gene-PUW38_19175;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=PUW38_19175 CP118116.1 Protein Homology CDS 3939734 3941650 . - 0 ID=cds-WJG80741.1;Parent=gene-PUW38_19175;Dbxref=NCBI_GP:WJG80741.1;Name=WJG80741.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=PUW38_19175;product=PTS mannitol transporter subunit IICBA;protein_id=WJG80741.1;transl_table=11 CP118116.1 Genbank gene 3942126 3942734 . + . ID=gene-PUW38_19180;Name=PUW38_19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19180 CP118116.1 Protein Homology CDS 3942126 3942734 . + 0 ID=cds-WJG80742.1;Parent=gene-PUW38_19180;Dbxref=NCBI_GP:WJG80742.1;Name=WJG80742.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=PUW38_19180;product=glutathione S-transferase;protein_id=WJG80742.1;transl_table=11 CP118116.1 Genbank gene 3942833 3944224 . + . ID=gene-PUW38_19185;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=PUW38_19185 CP118116.1 Protein Homology CDS 3942833 3944224 . + 0 ID=cds-WJG80743.1;Parent=gene-PUW38_19185;Dbxref=NCBI_GP:WJG80743.1;Name=WJG80743.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=PUW38_19185;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WJG80743.1;transl_table=11 CP118116.1 Genbank gene 3944221 3946071 . + . ID=gene-PUW38_19190;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=PUW38_19190 CP118116.1 Protein Homology CDS 3944221 3946071 . + 0 ID=cds-WJG80744.1;Parent=gene-PUW38_19190;Dbxref=NCBI_GP:WJG80744.1;Name=WJG80744.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525;gbkey=CDS;gene=selB;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=PUW38_19190;product=selenocysteine-specific translation elongation factor;protein_id=WJG80744.1;transl_table=11 CP118116.1 Genbank gene 3946319 3947200 . - . ID=gene-PUW38_19195;Name=PUW38_19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19195 CP118116.1 Protein Homology CDS 3946319 3947200 . - 0 ID=cds-WJG80745.1;Parent=gene-PUW38_19195;Dbxref=NCBI_GP:WJG80745.1;Name=WJG80745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=PUW38_19195;product=ROK family protein;protein_id=WJG80745.1;transl_table=11 CP118116.1 Genbank pseudogene 3947369 3948906 . + . ID=gene-PUW38_19200;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=pseudogene;locus_tag=PUW38_19200;pseudo=true CP118116.1 Protein Homology CDS 3947369 3948906 . + 0 ID=cds-PUW38_19200;Parent=gene-PUW38_19200;Note=frameshifted;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=PUW38_19200;product=aldehyde dehydrogenase AldB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3949024 3950979 . - . ID=gene-PUW38_19205;Name=PUW38_19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19205 CP118116.1 Protein Homology CDS 3949024 3950979 . - 0 ID=cds-WJG80746.1;Parent=gene-PUW38_19205;Dbxref=NCBI_GP:WJG80746.1;Name=WJG80746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=PUW38_19205;product=glycoside hydrolase family 127 protein;protein_id=WJG80746.1;transl_table=11 CP118116.1 Genbank gene 3951243 3952058 . + . ID=gene-PUW38_19210;Name=PUW38_19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19210 CP118116.1 Protein Homology CDS 3951243 3952058 . + 0 ID=cds-WJG80747.1;Parent=gene-PUW38_19210;Dbxref=NCBI_GP:WJG80747.1;Name=WJG80747.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=PUW38_19210;product=helix-turn-helix domain-containing protein;protein_id=WJG80747.1;transl_table=11 CP118116.1 Genbank gene 3952219 3952914 . - . ID=gene-PUW38_19215;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PUW38_19215 CP118116.1 Protein Homology CDS 3952219 3952914 . - 0 ID=cds-WJG80748.1;Parent=gene-PUW38_19215;Dbxref=NCBI_GP:WJG80748.1;Name=WJG80748.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=PUW38_19215;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJG80748.1;transl_table=11 CP118116.1 Genbank gene 3952908 3953768 . - . ID=gene-PUW38_19220;Name=PUW38_19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19220 CP118116.1 Protein Homology CDS 3952908 3953768 . - 0 ID=cds-WJG80749.1;Parent=gene-PUW38_19220;Dbxref=NCBI_GP:WJG80749.1;Name=WJG80749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=PUW38_19220;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WJG80749.1;transl_table=11 CP118116.1 Genbank gene 3953761 3954423 . - . ID=gene-PUW38_19225;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PUW38_19225 CP118116.1 Protein Homology CDS 3953761 3954423 . - 0 ID=cds-WJG80750.1;Parent=gene-PUW38_19225;Dbxref=NCBI_GP:WJG80750.1;Name=WJG80750.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=PUW38_19225;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WJG80750.1;transl_table=11 CP118116.1 Genbank pseudogene 3954420 3955914 . - . ID=gene-PUW38_19230;Name=PUW38_19230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19230;pseudo=true CP118116.1 Protein Homology CDS 3954420 3955914 . - 0 ID=cds-PUW38_19230;Parent=gene-PUW38_19230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=PUW38_19230;product=carbohydrate kinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3955918 3956904 . - . ID=gene-PUW38_19235;Name=PUW38_19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19235 CP118116.1 Protein Homology CDS 3955918 3956904 . - 0 ID=cds-WJG80751.1;Parent=gene-PUW38_19235;Dbxref=NCBI_GP:WJG80751.1;Name=WJG80751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=PUW38_19235;product=TRAP transporter substrate-binding protein;protein_id=WJG80751.1;transl_table=11 CP118116.1 Genbank gene 3956916 3958193 . - . ID=gene-PUW38_19240;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=PUW38_19240 CP118116.1 Protein Homology CDS 3956916 3958193 . - 0 ID=cds-WJG80752.1;Parent=gene-PUW38_19240;Dbxref=NCBI_GP:WJG80752.1;Name=WJG80752.1;gbkey=CDS;gene=yiaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=PUW38_19240;product=2%2C3-diketo-L-gulonate transporter large permease YiaN;protein_id=WJG80752.1;transl_table=11 CP118116.1 Genbank gene 3958196 3958669 . - . ID=gene-PUW38_19245;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=PUW38_19245 CP118116.1 Protein Homology CDS 3958196 3958669 . - 0 ID=cds-WJG80753.1;Parent=gene-PUW38_19245;Dbxref=NCBI_GP:WJG80753.1;Name=WJG80753.1;gbkey=CDS;gene=yiaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=PUW38_19245;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WJG80753.1;transl_table=11 CP118116.1 Genbank gene 3958808 3959740 . - . ID=gene-PUW38_19250;Name=PUW38_19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19250 CP118116.1 Protein Homology CDS 3958808 3959740 . - 0 ID=cds-WJG80754.1;Parent=gene-PUW38_19250;Dbxref=NCBI_GP:WJG80754.1;Name=WJG80754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=PUW38_19250;product=DUF4862 family protein;protein_id=WJG80754.1;transl_table=11 CP118116.1 Genbank gene 3959764 3960228 . - . ID=gene-PUW38_19255;Name=PUW38_19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19255 CP118116.1 Protein Homology CDS 3959764 3960228 . - 0 ID=cds-WJG80755.1;Parent=gene-PUW38_19255;Dbxref=NCBI_GP:WJG80755.1;Name=WJG80755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=PUW38_19255;product=YhcH/YjgK/YiaL family protein;protein_id=WJG80755.1;transl_table=11 CP118116.1 Genbank gene 3960240 3961232 . - . ID=gene-PUW38_19260;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=PUW38_19260 CP118116.1 Protein Homology CDS 3960240 3961232 . - 0 ID=cds-WJG80756.1;Parent=gene-PUW38_19260;Dbxref=NCBI_GP:WJG80756.1;Name=WJG80756.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=PUW38_19260;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WJG80756.1;transl_table=11 CP118116.1 Genbank gene 3961462 3962262 . + . ID=gene-PUW38_19265;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=PUW38_19265 CP118116.1 Protein Homology CDS 3961462 3962262 . + 0 ID=cds-WJG80757.1;Parent=gene-PUW38_19265;Dbxref=NCBI_GP:WJG80757.1;Name=WJG80757.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=PUW38_19265;product=IclR family transcriptional regulator YiaJ;protein_id=WJG80757.1;transl_table=11 CP118116.1 Genbank gene 3962379 3962852 . + . ID=gene-PUW38_19270;Name=PUW38_19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19270 CP118116.1 Protein Homology CDS 3962379 3962852 . + 0 ID=cds-WJG80758.1;Parent=gene-PUW38_19270;Dbxref=NCBI_GP:WJG80758.1;Name=WJG80758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=PUW38_19270;product=4Fe-4S dicluster domain-containing protein;protein_id=WJG80758.1;transl_table=11 CP118116.1 Genbank gene 3962889 3964139 . - . ID=gene-PUW38_19275;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=PUW38_19275 CP118116.1 Protein Homology CDS 3962889 3964139 . - 0 ID=cds-WJG80759.1;Parent=gene-PUW38_19275;Dbxref=NCBI_GP:WJG80759.1;Name=WJG80759.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=PUW38_19275;product=valine--pyruvate transaminase;protein_id=WJG80759.1;transl_table=11 CP118116.1 Genbank pseudogene 3964313 3966324 . - . ID=gene-PUW38_19280;Name=PUW38_19280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19280;pseudo=true CP118116.1 Protein Homology CDS 3964313 3966324 . - 0 ID=cds-PUW38_19280;Parent=gene-PUW38_19280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=PUW38_19280;product=alpha-amylase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3966640 3967464 . + . ID=gene-PUW38_19285;Name=PUW38_19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19285 CP118116.1 Protein Homology CDS 3966640 3967464 . + 0 ID=cds-WJG80760.1;Parent=gene-PUW38_19285;Dbxref=NCBI_GP:WJG80760.1;Name=WJG80760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=PUW38_19285;product=protein bax;protein_id=WJG80760.1;transl_table=11 CP118116.1 Genbank gene 3967525 3968703 . - . ID=gene-PUW38_19290;Name=PUW38_19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19290 CP118116.1 Protein Homology CDS 3967525 3968703 . - 0 ID=cds-WJG80761.1;Parent=gene-PUW38_19290;Dbxref=NCBI_GP:WJG80761.1;Name=WJG80761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=PUW38_19290;product=XylR family transcriptional regulator;protein_id=WJG80761.1;transl_table=11 CP118116.1 Genbank gene 3969066 3970388 . + . ID=gene-PUW38_19295;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=PUW38_19295 CP118116.1 Protein Homology CDS 3969066 3970388 . + 0 ID=cds-WJG80762.1;Parent=gene-PUW38_19295;Dbxref=NCBI_GP:WJG80762.1;Name=WJG80762.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=PUW38_19295;product=xylose isomerase;protein_id=WJG80762.1;transl_table=11 CP118116.1 Genbank gene 3970488 3971942 . + . ID=gene-PUW38_19300;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=PUW38_19300 CP118116.1 Protein Homology CDS 3970488 3971942 . + 0 ID=cds-WJG80763.1;Parent=gene-PUW38_19300;Dbxref=NCBI_GP:WJG80763.1;Name=WJG80763.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=PUW38_19300;product=xylulokinase;protein_id=WJG80763.1;transl_table=11 CP118116.1 Genbank gene 3972117 3972470 . + . ID=gene-PUW38_19305;Name=PUW38_19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19305 CP118116.1 Protein Homology CDS 3972117 3972470 . + 0 ID=cds-WJG80764.1;Parent=gene-PUW38_19305;Dbxref=NCBI_GP:WJG80764.1;Name=WJG80764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=PUW38_19305;product=YiaA/YiaB family protein;protein_id=WJG80764.1;transl_table=11 CP118116.1 Genbank pseudogene 3972493 3973488 . - . ID=gene-PUW38_19310;Name=PUW38_19310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19310;pseudo=true CP118116.1 Protein Homology CDS 3972493 3973488 . - 0 ID=cds-PUW38_19310;Parent=gene-PUW38_19310;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=PUW38_19310;product=acyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3973654 3973956 . + . ID=gene-PUW38_19315;Name=PUW38_19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19315 CP118116.1 Protein Homology CDS 3973654 3973956 . + 0 ID=cds-WJG80765.1;Parent=gene-PUW38_19315;Dbxref=NCBI_GP:WJG80765.1;Name=WJG80765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=PUW38_19315;product=YsaB family lipoprotein;protein_id=WJG80765.1;transl_table=11 CP118116.1 Genbank gene 3974095 3975006 . + . ID=gene-PUW38_19320;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=PUW38_19320 CP118116.1 Protein Homology CDS 3974095 3975006 . + 0 ID=cds-WJG80766.1;Parent=gene-PUW38_19320;Dbxref=NCBI_GP:WJG80766.1;Name=WJG80766.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=PUW38_19320;product=glycine--tRNA ligase subunit alpha;protein_id=WJG80766.1;transl_table=11 CP118116.1 Genbank gene 3975016 3977085 . + . ID=gene-PUW38_19325;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=PUW38_19325 CP118116.1 Protein Homology CDS 3975016 3977085 . + 0 ID=cds-WJG80767.1;Parent=gene-PUW38_19325;Dbxref=NCBI_GP:WJG80767.1;Name=WJG80767.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=PUW38_19325;product=glycine--tRNA ligase subunit beta;protein_id=WJG80767.1;transl_table=11 CP118116.1 Genbank pseudogene 3977475 3977873 . + . ID=gene-PUW38_19330;Name=PUW38_19330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19330;pseudo=true CP118116.1 Protein Homology CDS 3977475 3977873 . + 0 ID=cds-PUW38_19330;Parent=gene-PUW38_19330;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=PUW38_19330;product=IS3 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3978045 3978512 . + . ID=gene-PUW38_19335;Name=PUW38_19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19335 CP118116.1 Protein Homology CDS 3978045 3978512 . + 0 ID=cds-WJG80768.1;Parent=gene-PUW38_19335;Dbxref=NCBI_GP:WJG80768.1;Name=WJG80768.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462554.1;locus_tag=PUW38_19335;product=GNAT family N-acetyltransferase;protein_id=WJG80768.1;transl_table=11 CP118116.1 Genbank gene 3978690 3978977 . + . ID=gene-PUW38_19340;Name=PUW38_19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19340 CP118116.1 Protein Homology CDS 3978690 3978977 . + 0 ID=cds-WJG80769.1;Parent=gene-PUW38_19340;Dbxref=NCBI_GP:WJG80769.1;Name=WJG80769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=PUW38_19340;product=DUF1778 domain-containing protein;protein_id=WJG80769.1;transl_table=11 CP118116.1 Genbank gene 3978992 3979450 . + . ID=gene-PUW38_19345;Name=PUW38_19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19345 CP118116.1 Protein Homology CDS 3978992 3979450 . + 0 ID=cds-WJG80770.1;Parent=gene-PUW38_19345;Dbxref=NCBI_GP:WJG80770.1;Name=WJG80770.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810665.1;locus_tag=PUW38_19345;product=GNAT family N-acetyltransferase;protein_id=WJG80770.1;transl_table=11 CP118116.1 Genbank gene 3979821 3980360 . - . ID=gene-PUW38_19350;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=PUW38_19350 CP118116.1 Protein Homology CDS 3979821 3980360 . - 0 ID=cds-WJG80771.1;Parent=gene-PUW38_19350;Dbxref=NCBI_GP:WJG80771.1;Name=WJG80771.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=PUW38_19350;product=copper-binding periplasmic metallochaperone CueP;protein_id=WJG80771.1;transl_table=11 CP118116.1 Genbank gene 3980534 3980746 . - . ID=gene-PUW38_19355;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=PUW38_19355 CP118116.1 Protein Homology CDS 3980534 3980746 . - 0 ID=cds-WJG80772.1;Parent=gene-PUW38_19355;Dbxref=NCBI_GP:WJG80772.1;Name=WJG80772.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=PUW38_19355;product=RNA chaperone/antiterminator CspA;protein_id=WJG80772.1;transl_table=11 CP118116.1 Genbank gene 3981033 3981323 . - . ID=gene-PUW38_19360;Name=PUW38_19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19360 CP118116.1 Protein Homology CDS 3981033 3981323 . - 0 ID=cds-WJG80773.1;Parent=gene-PUW38_19360;Dbxref=NCBI_GP:WJG80773.1;Name=WJG80773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=PUW38_19360;product=HTH-type transcriptional regulator;protein_id=WJG80773.1;transl_table=11 CP118116.1 Genbank gene 3981762 3982472 . + . ID=gene-PUW38_19365;Name=PUW38_19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19365 CP118116.1 Protein Homology CDS 3981762 3982472 . + 0 ID=cds-WJG80774.1;Parent=gene-PUW38_19365;Dbxref=NCBI_GP:WJG80774.1;Name=WJG80774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=PUW38_19365;product=DUF3053 domain-containing protein;protein_id=WJG80774.1;transl_table=11 CP118116.1 Genbank gene 3982522 3983496 . - . ID=gene-PUW38_19370;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=PUW38_19370 CP118116.1 Protein Homology CDS 3982522 3983496 . - 0 ID=cds-WJG80775.1;Parent=gene-PUW38_19370;Dbxref=NCBI_GP:WJG80775.1;Name=WJG80775.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=PUW38_19370;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WJG80775.1;transl_table=11 CP118116.1 Genbank gene 3983715 3984377 . - . ID=gene-PUW38_19375;Name=PUW38_19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19375 CP118116.1 Protein Homology CDS 3983715 3984377 . - 0 ID=cds-WJG80776.1;Parent=gene-PUW38_19375;Dbxref=NCBI_GP:WJG80776.1;Name=WJG80776.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=PUW38_19375;product=OmpA family lipoprotein;protein_id=WJG80776.1;transl_table=11 CP118116.1 Genbank gene 3984530 3986863 . + . ID=gene-PUW38_19380;Name=PUW38_19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19380 CP118116.1 Protein Homology CDS 3984530 3986863 . + 0 ID=cds-WJG80777.1;Parent=gene-PUW38_19380;Dbxref=NCBI_GP:WJG80777.1;Name=WJG80777.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=PUW38_19380;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WJG80777.1;transl_table=11 CP118116.1 Genbank gene 3986832 3987272 . - . ID=gene-PUW38_19385;Name=PUW38_19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19385 CP118116.1 Protein Homology CDS 3986832 3987272 . - 0 ID=cds-WJG80778.1;Parent=gene-PUW38_19385;Dbxref=NCBI_GP:WJG80778.1;Name=WJG80778.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=PUW38_19385;product=N-acetyltransferase;protein_id=WJG80778.1;transl_table=11 CP118116.1 Genbank gene 3987250 3987831 . - . ID=gene-PUW38_19390;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=PUW38_19390 CP118116.1 Protein Homology CDS 3987250 3987831 . - 0 ID=cds-WJG80779.1;Parent=gene-PUW38_19390;Dbxref=NCBI_GP:WJG80779.1;Name=WJG80779.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=PUW38_19390;product=DNA-3-methyladenine glycosylase I;protein_id=WJG80779.1;transl_table=11 CP118116.1 Genbank gene 3987988 3988692 . + . ID=gene-PUW38_19395;Name=PUW38_19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19395 CP118116.1 Protein Homology CDS 3987988 3988692 . + 0 ID=cds-WJG80780.1;Parent=gene-PUW38_19395;Dbxref=NCBI_GP:WJG80780.1;Name=WJG80780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=PUW38_19395;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WJG80780.1;transl_table=11 CP118116.1 Genbank pseudogene 3988714 3988848 . + . ID=gene-PUW38_19400;Name=PUW38_19400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19400;pseudo=true CP118116.1 Protein Homology CDS 3988714 3988848 . + 0 ID=cds-PUW38_19400;Parent=gene-PUW38_19400;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585546.1;locus_tag=PUW38_19400;product=oxalate/formate antiport family MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3989207 3989731 . + . ID=gene-PUW38_19405;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=PUW38_19405 CP118116.1 Protein Homology CDS 3989207 3989731 . + 0 ID=cds-WJG80781.1;Parent=gene-PUW38_19405;Dbxref=NCBI_GP:WJG80781.1;Name=WJG80781.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=PUW38_19405;product=long polar fimbria major subunit LpfA;protein_id=WJG80781.1;transl_table=11 CP118116.1 Genbank gene 3989816 3990514 . + . ID=gene-PUW38_19410;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=PUW38_19410 CP118116.1 Protein Homology CDS 3989816 3990514 . + 0 ID=cds-WJG80782.1;Parent=gene-PUW38_19410;Dbxref=NCBI_GP:WJG80782.1;Name=WJG80782.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=PUW38_19410;product=long polar fimbrial biogenesis chaperone LpfB;protein_id=WJG80782.1;transl_table=11 CP118116.1 Genbank pseudogene 3990537 3993064 . + . ID=gene-PUW38_19415;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=pseudogene;locus_tag=PUW38_19415;pseudo=true CP118116.1 Protein Homology CDS 3990537 3993064 . + 0 ID=cds-PUW38_19415;Parent=gene-PUW38_19415;Note=frameshifted;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=PUW38_19415;product=outer membrane usher protein LpfC;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3993082 3994161 . + . ID=gene-PUW38_19420;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=PUW38_19420 CP118116.1 Protein Homology CDS 3993082 3994161 . + 0 ID=cds-WJG80783.1;Parent=gene-PUW38_19420;Dbxref=NCBI_GP:WJG80783.1;Name=WJG80783.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=PUW38_19420;product=long polar fimbrial protein LpfD;protein_id=WJG80783.1;transl_table=11 CP118116.1 Genbank gene 3994167 3994694 . + . ID=gene-PUW38_19425;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=PUW38_19425 CP118116.1 Protein Homology CDS 3994167 3994694 . + 0 ID=cds-WJG80784.1;Parent=gene-PUW38_19425;Dbxref=NCBI_GP:WJG80784.1;Name=WJG80784.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=PUW38_19425;product=long polar fimbrial protein LpfE;protein_id=WJG80784.1;transl_table=11 CP118116.1 Genbank pseudogene 3994912 3996602 . + . ID=gene-PUW38_19430;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=pseudogene;locus_tag=PUW38_19430;pseudo=true CP118116.1 Protein Homology CDS 3994912 3996602 . + 0 ID=cds-PUW38_19430;Parent=gene-PUW38_19430;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=PUW38_19430;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3996693 3996769 . + . ID=gene-PUW38_19435;Name=PUW38_19435;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_19435 CP118116.1 tRNAscan-SE tRNA 3996693 3996769 . + . ID=rna-PUW38_19435;Parent=gene-PUW38_19435;anticodon=(pos:3996727..3996729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_19435;product=tRNA-Pro CP118116.1 tRNAscan-SE exon 3996693 3996769 . + . ID=exon-PUW38_19435-1;Parent=rna-PUW38_19435;anticodon=(pos:3996727..3996729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_19435;product=tRNA-Pro CP118116.1 Genbank gene 3996806 3996924 . + . ID=gene-PUW38_19440;Name=PUW38_19440;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW38_19440 CP118116.1 cmsearch ncRNA 3996806 3996924 . + . ID=rna-PUW38_19440;Parent=gene-PUW38_19440;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_19440;product=RtT sRNA CP118116.1 cmsearch exon 3996806 3996924 . + . ID=exon-PUW38_19440-1;Parent=rna-PUW38_19440;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_19440;product=RtT sRNA CP118116.1 Genbank pseudogene 3996915 3997914 . - . ID=gene-PUW38_19445;Name=PUW38_19445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19445;pseudo=true CP118116.1 Protein Homology CDS 3996915 3997914 . - 0 ID=cds-PUW38_19445;Parent=gene-PUW38_19445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=PUW38_19445;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 3998064 3999188 . + . ID=gene-PUW38_19450;Name=PUW38_19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19450 CP118116.1 Protein Homology CDS 3998064 3999188 . + 0 ID=cds-WJG80785.1;Parent=gene-PUW38_19450;Dbxref=NCBI_GP:WJG80785.1;Name=WJG80785.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=PUW38_19450;product=aryl-sulfate sulfotransferase;protein_id=WJG80785.1;transl_table=11 CP118116.1 Genbank gene 3999245 4000570 . + . ID=gene-PUW38_19455;Name=PUW38_19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19455 CP118116.1 Protein Homology CDS 3999245 4000570 . + 0 ID=cds-WJG80786.1;Parent=gene-PUW38_19455;Dbxref=NCBI_GP:WJG80786.1;Name=WJG80786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=PUW38_19455;product=uracil-xanthine permease family protein;protein_id=WJG80786.1;transl_table=11 CP118116.1 Genbank pseudogene 4001126 4002733 . + . ID=gene-PUW38_19460;Name=PUW38_19460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19460;pseudo=true CP118116.1 Protein Homology CDS 4001126 4002733 . + 0 ID=cds-PUW38_19460;Parent=gene-PUW38_19460;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=PUW38_19460;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4002890 4003906 . + . ID=gene-PUW38_19465;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=pseudogene;locus_tag=PUW38_19465;pseudo=true CP118116.1 Protein Homology CDS 4002890 4003906 . + 0 ID=cds-PUW38_19465;Parent=gene-PUW38_19465;Note=frameshifted;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=PUW38_19465;product=dipeptide ABC transporter permease DppB;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4003916 4004817 . + . ID=gene-PUW38_19470;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=pseudogene;locus_tag=PUW38_19470;pseudo=true CP118116.1 Protein Homology CDS 4003916 4004817 . + 0 ID=cds-PUW38_19470;Parent=gene-PUW38_19470;Note=frameshifted;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=PUW38_19470;product=dipeptide ABC transporter permease DppC;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4004828 4005811 . + . ID=gene-PUW38_19475;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=PUW38_19475 CP118116.1 Protein Homology CDS 4004828 4005811 . + 0 ID=cds-WJG80787.1;Parent=gene-PUW38_19475;Dbxref=NCBI_GP:WJG80787.1;Name=WJG80787.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=PUW38_19475;product=dipeptide ABC transporter ATP-binding protein;protein_id=WJG80787.1;transl_table=11 CP118116.1 Genbank gene 4005808 4006821 . + . ID=gene-PUW38_19480;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=PUW38_19480 CP118116.1 Protein Homology CDS 4005808 4006821 . + 0 ID=cds-WJG80788.1;Parent=gene-PUW38_19480;Dbxref=NCBI_GP:WJG80788.1;Name=WJG80788.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=PUW38_19480;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WJG80788.1;transl_table=11 CP118116.1 Genbank pseudogene 4006922 4008220 . - . ID=gene-PUW38_19485;Name=PUW38_19485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19485;pseudo=true CP118116.1 Protein Homology CDS 4006922 4008220 . - 0 ID=cds-PUW38_19485;Parent=gene-PUW38_19485;Note=internal stop;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=PUW38_19485;product=aromatic amino acid transport family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4008338 4008487 . - . ID=gene-PUW38_19490;Name=PUW38_19490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19490;pseudo=true CP118116.1 Protein Homology CDS 4008338 4008487 . - 0 ID=cds-PUW38_19490;Parent=gene-PUW38_19490;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.2;locus_tag=PUW38_19490;product=PLP-dependent transferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4008863 4008970 . + . ID=gene-PUW38_19495;Name=PUW38_19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19495 CP118116.1 Protein Homology CDS 4008863 4008970 . + 0 ID=cds-WJG80789.1;Parent=gene-PUW38_19495;Dbxref=NCBI_GP:WJG80789.1;Name=WJG80789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141634.1;locus_tag=PUW38_19495;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WJG80789.1;transl_table=11 CP118116.1 Genbank pseudogene 4009052 4010731 . - . ID=gene-PUW38_19500;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=pseudogene;locus_tag=PUW38_19500;pseudo=true CP118116.1 Protein Homology CDS 4009052 4010731 . - 0 ID=cds-PUW38_19500;Parent=gene-PUW38_19500;Note=internal stop;Ontology_term=GO:0030244,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsG;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=PUW38_19500;product=cellulose biosynthesis protein BcsG;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4010728 4010919 . - . ID=gene-PUW38_19505;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=PUW38_19505 CP118116.1 Protein Homology CDS 4010728 4010919 . - 0 ID=cds-WJG80790.1;Parent=gene-PUW38_19505;Dbxref=NCBI_GP:WJG80790.1;Name=WJG80790.1;Ontology_term=GO:0052324,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsF;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=PUW38_19505;product=cellulose biosynthesis protein BcsF;protein_id=WJG80790.1;transl_table=11 CP118116.1 Genbank gene 4010916 4012487 . - . ID=gene-PUW38_19510;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=PUW38_19510 CP118116.1 Protein Homology CDS 4010916 4012487 . - 0 ID=cds-WJG80791.1;Parent=gene-PUW38_19510;Dbxref=NCBI_GP:WJG80791.1;Name=WJG80791.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=PUW38_19510;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WJG80791.1;transl_table=11 CP118116.1 Genbank gene 4012732 4012935 . + . ID=gene-PUW38_19515;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=PUW38_19515 CP118116.1 Protein Homology CDS 4012732 4012935 . + 0 ID=cds-WJG80792.1;Parent=gene-PUW38_19515;Dbxref=NCBI_GP:WJG80792.1;Name=WJG80792.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=PUW38_19515;product=cellulose biosynthesis protein BcsR;protein_id=WJG80792.1;transl_table=11 CP118116.1 Genbank pseudogene 4012936 4013688 . + . ID=gene-PUW38_19520;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=pseudogene;locus_tag=PUW38_19520;pseudo=true CP118116.1 Protein Homology CDS 4012936 4013688 . + 0 ID=cds-PUW38_19520;Parent=gene-PUW38_19520;Note=internal stop;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=PUW38_19520;product=cellulose biosynthesis protein BcsQ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4013685 4016309 . + . ID=gene-PUW38_19525;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=PUW38_19525 CP118116.1 Protein Homology CDS 4013685 4016309 . + 0 ID=cds-WJG80793.1;Parent=gene-PUW38_19525;Dbxref=NCBI_GP:WJG80793.1;Name=WJG80793.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=PUW38_19525;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WJG80793.1;transl_table=11 CP118116.1 Genbank gene 4016320 4018620 . + . ID=gene-PUW38_19530;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=PUW38_19530 CP118116.1 Protein Homology CDS 4016320 4018620 . + 0 ID=cds-WJG80794.1;Parent=gene-PUW38_19530;Dbxref=NCBI_GP:WJG80794.1;Name=WJG80794.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=PUW38_19530;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WJG80794.1;transl_table=11 CP118116.1 Genbank gene 4018624 4019733 . + . ID=gene-PUW38_19535;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=PUW38_19535 CP118116.1 Protein Homology CDS 4018624 4019733 . + 0 ID=cds-WJG80795.1;Parent=gene-PUW38_19535;Dbxref=NCBI_GP:WJG80795.1;Name=WJG80795.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=PUW38_19535;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WJG80795.1;transl_table=11 CP118116.1 Genbank gene 4019715 4023200 . + . ID=gene-PUW38_19540;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=PUW38_19540 CP118116.1 Protein Homology CDS 4019715 4023200 . + 0 ID=cds-WJG80796.1;Parent=gene-PUW38_19540;Dbxref=NCBI_GP:WJG80796.1;Name=WJG80796.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=PUW38_19540;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WJG80796.1;transl_table=11 CP118116.1 Genbank gene 4023374 4025380 . + . ID=gene-PUW38_19545;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=PUW38_19545 CP118116.1 Protein Homology CDS 4023374 4025380 . + 0 ID=cds-WJG80797.1;Parent=gene-PUW38_19545;Dbxref=NCBI_GP:WJG80797.1;Name=WJG80797.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=PUW38_19545;product=biofilm formation regulator HmsP;protein_id=WJG80797.1;transl_table=11 CP118116.1 Genbank gene 4025538 4026824 . + . ID=gene-PUW38_19550;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=PUW38_19550 CP118116.1 Protein Homology CDS 4025538 4026824 . + 0 ID=cds-WJG80798.1;Parent=gene-PUW38_19550;Dbxref=NCBI_GP:WJG80798.1;Name=WJG80798.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858227.1;locus_tag=PUW38_19550;product=C4-dicarboxylate transporter DctC;protein_id=WJG80798.1;transl_table=11 CP118116.1 Genbank gene 4027044 4028531 . + . ID=gene-PUW38_19555;Name=PUW38_19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19555 CP118116.1 Protein Homology CDS 4027044 4028531 . + 0 ID=cds-WJG80799.1;Parent=gene-PUW38_19555;Dbxref=NCBI_GP:WJG80799.1;Name=WJG80799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=PUW38_19555;product=pitrilysin family protein;protein_id=WJG80799.1;transl_table=11 CP118116.1 Genbank gene 4028585 4029514 . - . ID=gene-PUW38_19560;Name=PUW38_19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19560 CP118116.1 Protein Homology CDS 4028585 4029514 . - 0 ID=cds-WJG80800.1;Parent=gene-PUW38_19560;Dbxref=NCBI_GP:WJG80800.1;Name=WJG80800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=PUW38_19560;product=sugar kinase;protein_id=WJG80800.1;transl_table=11 CP118116.1 Genbank pseudogene 4029743 4030509 . + . ID=gene-PUW38_19565;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=pseudogene;locus_tag=PUW38_19565;pseudo=true CP118116.1 Protein Homology CDS 4029743 4030509 . + 0 ID=cds-PUW38_19565;Parent=gene-PUW38_19565;Note=frameshifted;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=PUW38_19565;product=cyclic-guanylate-specific phosphodiesterase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4030619 4032679 . + . ID=gene-PUW38_19570;Name=PUW38_19570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19570;pseudo=true CP118116.1 Protein Homology CDS 4030619 4032679 . + 0 ID=cds-PUW38_19570;Parent=gene-PUW38_19570;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=PUW38_19570;product=AsmA family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4032719 4034041 . - . ID=gene-PUW38_19575;Name=PUW38_19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19575 CP118116.1 Protein Homology CDS 4032719 4034041 . - 0 ID=cds-WJG80801.1;Parent=gene-PUW38_19575;Dbxref=NCBI_GP:WJG80801.1;Name=WJG80801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=PUW38_19575;product=MFS transporter;protein_id=WJG80801.1;transl_table=11 CP118116.1 Genbank gene 4034392 4035420 . - . ID=gene-PUW38_19580;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=PUW38_19580 CP118116.1 Protein Homology CDS 4034392 4035420 . - 0 ID=cds-WJG80802.1;Parent=gene-PUW38_19580;Dbxref=NCBI_GP:WJG80802.1;Name=WJG80802.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=PUW38_19580;product=inner membrane protein YhjD;protein_id=WJG80802.1;transl_table=11 CP118116.1 Genbank pseudogene 4035493 4036391 . - . ID=gene-PUW38_19585;Name=PUW38_19585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19585;pseudo=true CP118116.1 Protein Homology CDS 4035493 4036391 . - 0 ID=cds-PUW38_19585;Parent=gene-PUW38_19585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=PUW38_19585;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4037022 4037620 . + . ID=gene-PUW38_19590;Name=PUW38_19590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19590;pseudo=true CP118116.1 Protein Homology CDS 4037022 4037620 . + 0 ID=cds-PUW38_19590;Parent=gene-PUW38_19590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=PUW38_19590;product=response regulator transcription factor;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4037626 4037982 . - . ID=gene-PUW38_19595;Name=PUW38_19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19595 CP118116.1 Protein Homology CDS 4037626 4037982 . - 0 ID=cds-WJG80803.1;Parent=gene-PUW38_19595;Dbxref=NCBI_GP:WJG80803.1;Name=WJG80803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=PUW38_19595;product=lysozyme;protein_id=WJG80803.1;transl_table=11 CP118116.1 Genbank gene 4038263 4039852 . + . ID=gene-PUW38_19600;Name=PUW38_19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19600 CP118116.1 Protein Homology CDS 4038263 4039852 . + 0 ID=cds-WJG80804.1;Parent=gene-PUW38_19600;Dbxref=NCBI_GP:WJG80804.1;Name=WJG80804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=PUW38_19600;product=STY4199 family HEPN domain-containing protein;protein_id=WJG80804.1;transl_table=11 CP118116.1 Genbank gene 4039865 4041514 . - . ID=gene-PUW38_19605;Name=PUW38_19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19605 CP118116.1 Protein Homology CDS 4039865 4041514 . - 0 ID=cds-WJG80805.1;Parent=gene-PUW38_19605;Dbxref=NCBI_GP:WJG80805.1;Name=WJG80805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=PUW38_19605;product=alpha%2Calpha-trehalase;protein_id=WJG80805.1;transl_table=11 CP118116.1 Genbank gene 4041840 4042559 . + . ID=gene-PUW38_19610;Name=PUW38_19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19610 CP118116.1 Protein Homology CDS 4041840 4042559 . + 0 ID=cds-WJG80806.1;Parent=gene-PUW38_19610;Dbxref=NCBI_GP:WJG80806.1;Name=WJG80806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=PUW38_19610;product=GntR family transcriptional regulator;protein_id=WJG80806.1;transl_table=11 CP118116.1 Genbank pseudogene 4042735 4043711 . + . ID=gene-PUW38_19615;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=pseudogene;locus_tag=PUW38_19615;pseudo=true CP118116.1 Protein Homology CDS 4042735 4043711 . + 0 ID=cds-PUW38_19615;Parent=gene-PUW38_19615;Note=frameshifted;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=PUW38_19615;product=6-phosphofructose-aspartate deglycase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4043775 4044620 . + . ID=gene-PUW38_19620;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=PUW38_19620 CP118116.1 Protein Homology CDS 4043775 4044620 . + 0 ID=cds-WJG83294.1;Parent=gene-PUW38_19620;Dbxref=NCBI_GP:WJG83294.1;Name=WJG83294.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=PUW38_19620;product=fructose-aspartate kinase;protein_id=WJG83294.1;transl_table=11 CP118116.1 Genbank gene 4044674 4045993 . + . ID=gene-PUW38_19625;Name=PUW38_19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19625 CP118116.1 Protein Homology CDS 4044674 4045993 . + 0 ID=cds-WJG80807.1;Parent=gene-PUW38_19625;Dbxref=NCBI_GP:WJG80807.1;Name=WJG80807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=PUW38_19625;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WJG80807.1;transl_table=11 CP118116.1 Genbank gene 4046052 4047095 . + . ID=gene-PUW38_19630;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=PUW38_19630 CP118116.1 Protein Homology CDS 4046052 4047095 . + 0 ID=cds-WJG80808.1;Parent=gene-PUW38_19630;Dbxref=NCBI_GP:WJG80808.1;Name=WJG80808.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=PUW38_19630;product=fructose-asparagine asparaginase;protein_id=WJG80808.1;transl_table=11 CP118116.1 Genbank gene 4047142 4048494 . - . ID=gene-PUW38_19635;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=PUW38_19635 CP118116.1 Protein Homology CDS 4047142 4048494 . - 0 ID=cds-WJG80809.1;Parent=gene-PUW38_19635;Dbxref=NCBI_GP:WJG80809.1;Name=WJG80809.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=PUW38_19635;product=glutathione-disulfide reductase;protein_id=WJG80809.1;transl_table=11 CP118116.1 Genbank gene 4048599 4049441 . - . ID=gene-PUW38_19640;Name=PUW38_19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19640 CP118116.1 Protein Homology CDS 4048599 4049441 . - 0 ID=cds-WJG80810.1;Parent=gene-PUW38_19640;Dbxref=NCBI_GP:WJG80810.1;Name=WJG80810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=PUW38_19640;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WJG80810.1;transl_table=11 CP118116.1 Genbank gene 4049652 4050923 . + . ID=gene-PUW38_19645;Name=PUW38_19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19645 CP118116.1 Protein Homology CDS 4049652 4050923 . + 0 ID=cds-WJG80811.1;Parent=gene-PUW38_19645;Dbxref=NCBI_GP:WJG80811.1;Name=WJG80811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=PUW38_19645;product=phosphatase PAP2 family protein;protein_id=WJG80811.1;transl_table=11 CP118116.1 Genbank pseudogene 4051105 4053146 . + . ID=gene-PUW38_19650;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=pseudogene;locus_tag=PUW38_19650;pseudo=true CP118116.1 Protein Homology CDS 4051105 4053146 . + 0 ID=cds-PUW38_19650;Parent=gene-PUW38_19650;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013591.2;locus_tag=PUW38_19650;product=oligopeptidase A;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4053153 4053911 . + . ID=gene-PUW38_19655;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=PUW38_19655 CP118116.1 Protein Homology CDS 4053153 4053911 . + 0 ID=cds-WJG80812.1;Parent=gene-PUW38_19655;Dbxref=NCBI_GP:WJG80812.1;Name=WJG80812.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=PUW38_19655;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WJG80812.1;transl_table=11 CP118116.1 Genbank gene 4054003 4055475 . - . ID=gene-PUW38_19660;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=PUW38_19660 CP118116.1 Protein Homology CDS 4054003 4055475 . - 0 ID=cds-WJG80813.1;Parent=gene-PUW38_19660;Dbxref=NCBI_GP:WJG80813.1;Name=WJG80813.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=PUW38_19660;product=dipeptide/tripeptide permease DtpB;protein_id=WJG80813.1;transl_table=11 CP118116.1 Genbank gene 4055800 4056234 . - . ID=gene-PUW38_19665;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=PUW38_19665 CP118116.1 Protein Homology CDS 4055800 4056234 . - 0 ID=cds-WJG80814.1;Parent=gene-PUW38_19665;Dbxref=NCBI_GP:WJG80814.1;Name=WJG80814.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=PUW38_19665;product=universal stress protein UspA;protein_id=WJG80814.1;transl_table=11 CP118116.1 Genbank gene 4056622 4056957 . + . ID=gene-PUW38_19670;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=PUW38_19670 CP118116.1 Protein Homology CDS 4056622 4056957 . + 0 ID=cds-WJG80815.1;Parent=gene-PUW38_19670;Dbxref=NCBI_GP:WJG80815.1;Name=WJG80815.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=PUW38_19670;product=universal stress protein UspB;protein_id=WJG80815.1;transl_table=11 CP118116.1 Genbank gene 4057098 4058594 . - . ID=gene-PUW38_19675;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=PUW38_19675 CP118116.1 Protein Homology CDS 4057098 4058594 . - 0 ID=cds-WJG80816.1;Parent=gene-PUW38_19675;Dbxref=NCBI_GP:WJG80816.1;Name=WJG80816.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=PUW38_19675;product=inorganic phosphate transporter PitA;protein_id=WJG80816.1;transl_table=11 CP118116.1 Genbank gene 4058825 4060021 . + . ID=gene-PUW38_19680;Name=PUW38_19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19680 CP118116.1 Protein Homology CDS 4058825 4060021 . + 0 ID=cds-WJG80817.1;Parent=gene-PUW38_19680;Dbxref=NCBI_GP:WJG80817.1;Name=WJG80817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=PUW38_19680;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WJG80817.1;transl_table=11 CP118116.1 Genbank gene 4060327 4061394 . + . ID=gene-PUW38_19685;Name=PUW38_19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19685 CP118116.1 Protein Homology CDS 4060327 4061394 . + 0 ID=cds-WJG80818.1;Parent=gene-PUW38_19685;Dbxref=NCBI_GP:WJG80818.1;Name=WJG80818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=PUW38_19685;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WJG80818.1;transl_table=11 CP118116.1 Genbank gene 4061391 4064132 . + . ID=gene-PUW38_19690;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=PUW38_19690 CP118116.1 Protein Homology CDS 4061391 4064132 . + 0 ID=cds-WJG80819.1;Parent=gene-PUW38_19690;Dbxref=NCBI_GP:WJG80819.1;Name=WJG80819.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=PUW38_19690;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WJG80819.1;transl_table=11 CP118116.1 Genbank gene 4064132 4065256 . + . ID=gene-PUW38_19695;Name=PUW38_19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19695 CP118116.1 Protein Homology CDS 4064132 4065256 . + 0 ID=cds-WJG80820.1;Parent=gene-PUW38_19695;Dbxref=NCBI_GP:WJG80820.1;Name=WJG80820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=PUW38_19695;product=ABC transporter permease;protein_id=WJG80820.1;transl_table=11 CP118116.1 Genbank gene 4065345 4065746 . - . ID=gene-PUW38_19700;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=PUW38_19700 CP118116.1 Protein Homology CDS 4065345 4065746 . - 0 ID=cds-WJG80821.1;Parent=gene-PUW38_19700;Dbxref=NCBI_GP:WJG80821.1;Name=WJG80821.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=PUW38_19700;product=nickel-responsive transcriptional regulator NikR;protein_id=WJG80821.1;transl_table=11 CP118116.1 Genbank gene 4065838 4066416 . - . ID=gene-PUW38_19705;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=PUW38_19705 CP118116.1 Protein Homology CDS 4065838 4066416 . - 0 ID=cds-WJG80822.1;Parent=gene-PUW38_19705;Dbxref=NCBI_GP:WJG80822.1;Name=WJG80822.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=PUW38_19705;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WJG80822.1;transl_table=11 CP118116.1 Genbank gene 4066468 4067517 . - . ID=gene-PUW38_19710;Name=PUW38_19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19710 CP118116.1 Protein Homology CDS 4066468 4067517 . - 0 ID=cds-WJG80823.1;Parent=gene-PUW38_19710;Dbxref=NCBI_GP:WJG80823.1;Name=WJG80823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=PUW38_19710;product=AI-2E family transporter;protein_id=WJG80823.1;transl_table=11 CP118116.1 Genbank gene 4067607 4068866 . + . ID=gene-PUW38_19715;Name=PUW38_19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19715 CP118116.1 Protein Homology CDS 4067607 4068866 . + 0 ID=cds-WJG80824.1;Parent=gene-PUW38_19715;Dbxref=NCBI_GP:WJG80824.1;Name=WJG80824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=PUW38_19715;product=MFS transporter;protein_id=WJG80824.1;transl_table=11 CP118116.1 Genbank gene 4068870 4069427 . - . ID=gene-PUW38_19720;Name=PUW38_19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19720 CP118116.1 Protein Homology CDS 4068870 4069427 . - 0 ID=cds-WJG80825.1;Parent=gene-PUW38_19720;Dbxref=NCBI_GP:WJG80825.1;Name=WJG80825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=PUW38_19720;product=DcrB family lipoprotein;protein_id=WJG80825.1;transl_table=11 CP118116.1 Genbank gene 4069500 4070165 . - . ID=gene-PUW38_19725;Name=PUW38_19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19725 CP118116.1 Protein Homology CDS 4069500 4070165 . - 0 ID=cds-WJG80826.1;Parent=gene-PUW38_19725;Dbxref=NCBI_GP:WJG80826.1;Name=WJG80826.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=PUW38_19725;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WJG80826.1;transl_table=11 CP118116.1 Genbank gene 4070335 4070580 . + . ID=gene-PUW38_19730;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=PUW38_19730 CP118116.1 Protein Homology CDS 4070335 4070580 . + 0 ID=cds-WJG83295.1;Parent=gene-PUW38_19730;Dbxref=NCBI_GP:WJG83295.1;Name=WJG83295.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=PUW38_19730;product=sulfurtransferase TusA;protein_id=WJG83295.1;transl_table=11 CP118116.1 Genbank gene 4070604 4072247 . - . ID=gene-PUW38_19735;Name=PUW38_19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19735 CP118116.1 Protein Homology CDS 4070604 4072247 . - 0 ID=cds-WJG80827.1;Parent=gene-PUW38_19735;Dbxref=NCBI_GP:WJG80827.1;Name=WJG80827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=PUW38_19735;product=methyl-accepting chemotaxis citrate transducer;protein_id=WJG80827.1;transl_table=11 CP118116.1 Genbank gene 4072447 4074645 . - . ID=gene-PUW38_19740;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=PUW38_19740 CP118116.1 Protein Homology CDS 4072447 4074645 . - 0 ID=cds-WJG80828.1;Parent=gene-PUW38_19740;Dbxref=NCBI_GP:WJG80828.1;Name=WJG80828.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=PUW38_19740;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WJG80828.1;transl_table=11 CP118116.1 Genbank gene 4074726 4075352 . - . ID=gene-PUW38_19745;Name=PUW38_19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19745 CP118116.1 Protein Homology CDS 4074726 4075352 . - 0 ID=cds-WJG80829.1;Parent=gene-PUW38_19745;Dbxref=NCBI_GP:WJG80829.1;Name=WJG80829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=PUW38_19745;product=lysoplasmalogenase;protein_id=WJG80829.1;transl_table=11 CP118116.1 Genbank gene 4075494 4075865 . + . ID=gene-PUW38_19750;Name=PUW38_19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19750 CP118116.1 Protein Homology CDS 4075494 4075865 . + 0 ID=cds-WJG80830.1;Parent=gene-PUW38_19750;Dbxref=NCBI_GP:WJG80830.1;Name=WJG80830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=PUW38_19750;product=DUF2500 domain-containing protein;protein_id=WJG80830.1;transl_table=11 CP118116.1 Genbank gene 4075887 4076156 . - . ID=gene-PUW38_19755;Name=PUW38_19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19755 CP118116.1 Protein Homology CDS 4075887 4076156 . - 0 ID=cds-WJG83296.1;Parent=gene-PUW38_19755;Dbxref=NCBI_GP:WJG83296.1;Name=WJG83296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=PUW38_19755;product=DUF1145 family protein;protein_id=WJG83296.1;transl_table=11 CP118116.1 Genbank gene 4076146 4076742 . - . ID=gene-PUW38_19760;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=PUW38_19760 CP118116.1 Protein Homology CDS 4076146 4076742 . - 0 ID=cds-WJG80831.1;Parent=gene-PUW38_19760;Dbxref=NCBI_GP:WJG80831.1;Name=WJG80831.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=PUW38_19760;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WJG80831.1;transl_table=11 CP118116.1 Genbank gene 4076868 4078343 . + . ID=gene-PUW38_19765;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=PUW38_19765 CP118116.1 Protein Homology CDS 4076868 4078343 . + 0 ID=cds-WJG80832.1;Parent=gene-PUW38_19765;Dbxref=NCBI_GP:WJG80832.1;Name=WJG80832.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=PUW38_19765;product=signal recognition particle-docking protein FtsY;protein_id=WJG80832.1;transl_table=11 CP118116.1 Genbank gene 4078346 4079014 . + . ID=gene-PUW38_19770;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=PUW38_19770 CP118116.1 Protein Homology CDS 4078346 4079014 . + 0 ID=cds-WJG80833.1;Parent=gene-PUW38_19770;Dbxref=NCBI_GP:WJG80833.1;Name=WJG80833.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=PUW38_19770;product=cell division ATP-binding protein FtsE;protein_id=WJG80833.1;transl_table=11 CP118116.1 Genbank gene 4079007 4080062 . + . ID=gene-PUW38_19775;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=PUW38_19775 CP118116.1 Protein Homology CDS 4079007 4080062 . + 0 ID=cds-WJG80834.1;Parent=gene-PUW38_19775;Dbxref=NCBI_GP:WJG80834.1;Name=WJG80834.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=PUW38_19775;product=permease-like cell division protein FtsX;protein_id=WJG80834.1;transl_table=11 CP118116.1 Genbank pseudogene 4080308 4081161 . + . ID=gene-PUW38_19780;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=pseudogene;locus_tag=PUW38_19780;pseudo=true CP118116.1 Protein Homology CDS 4080308 4081161 . + 0 ID=cds-PUW38_19780;Parent=gene-PUW38_19780;Note=frameshifted;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=PUW38_19780;product=RNA polymerase sigma factor RpoH;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4081483 4082586 . + . ID=gene-PUW38_19785;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=PUW38_19785 CP118116.1 Protein Homology CDS 4081483 4082586 . + 0 ID=cds-WJG80835.1;Parent=gene-PUW38_19785;Dbxref=NCBI_GP:WJG80835.1;Name=WJG80835.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=PUW38_19785;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WJG80835.1;transl_table=11 CP118116.1 Genbank gene 4082670 4082804 . - . ID=gene-PUW38_19790;Name=PUW38_19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19790 CP118116.1 Protein Homology CDS 4082670 4082804 . - 0 ID=cds-WJG80836.1;Parent=gene-PUW38_19790;Dbxref=NCBI_GP:WJG80836.1;Name=WJG80836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=PUW38_19790;product=hypothetical protein;protein_id=WJG80836.1;transl_table=11 CP118116.1 Genbank gene 4082782 4083165 . - . ID=gene-PUW38_19795;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=PUW38_19795 CP118116.1 Protein Homology CDS 4082782 4083165 . - 0 ID=cds-WJG80837.1;Parent=gene-PUW38_19795;Dbxref=NCBI_GP:WJG80837.1;Name=WJG80837.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=PUW38_19795;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WJG80837.1;transl_table=11 CP118116.1 Genbank gene 4083586 4084695 . + . ID=gene-PUW38_19800;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=PUW38_19800 CP118116.1 Protein Homology CDS 4083586 4084695 . + 0 ID=cds-WJG80838.1;Parent=gene-PUW38_19800;Dbxref=NCBI_GP:WJG80838.1;Name=WJG80838.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=PUW38_19800;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WJG80838.1;transl_table=11 CP118116.1 Genbank gene 4084755 4085681 . + . ID=gene-PUW38_19805;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=PUW38_19805 CP118116.1 Protein Homology CDS 4084755 4085681 . + 0 ID=cds-WJG80839.1;Parent=gene-PUW38_19805;Dbxref=NCBI_GP:WJG80839.1;Name=WJG80839.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=PUW38_19805;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WJG80839.1;transl_table=11 CP118116.1 Genbank gene 4085678 4086955 . + . ID=gene-PUW38_19810;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=PUW38_19810 CP118116.1 Protein Homology CDS 4085678 4086955 . + 0 ID=cds-WJG80840.1;Parent=gene-PUW38_19810;Dbxref=NCBI_GP:WJG80840.1;Name=WJG80840.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=PUW38_19810;product=branched chain amino acid ABC transporter permease LivM;protein_id=WJG80840.1;transl_table=11 CP118116.1 Genbank gene 4086952 4087719 . + . ID=gene-PUW38_19815;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=PUW38_19815 CP118116.1 Protein Homology CDS 4086952 4087719 . + 0 ID=cds-WJG80841.1;Parent=gene-PUW38_19815;Dbxref=NCBI_GP:WJG80841.1;Name=WJG80841.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=PUW38_19815;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WJG80841.1;transl_table=11 CP118116.1 Genbank gene 4087721 4088434 . + . ID=gene-PUW38_19820;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=PUW38_19820 CP118116.1 Protein Homology CDS 4087721 4088434 . + 0 ID=cds-WJG80842.1;Parent=gene-PUW38_19820;Dbxref=NCBI_GP:WJG80842.1;Name=WJG80842.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=PUW38_19820;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WJG80842.1;transl_table=11 CP118116.1 Genbank gene 4088565 4088786 . + . ID=gene-PUW38_19825;Name=PUW38_19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19825 CP118116.1 Protein Homology CDS 4088565 4088786 . + 0 ID=cds-WJG80843.1;Parent=gene-PUW38_19825;Dbxref=NCBI_GP:WJG80843.1;Name=WJG80843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=PUW38_19825;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WJG80843.1;transl_table=11 CP118116.1 Genbank gene 4088783 4089151 . + . ID=gene-PUW38_19830;Name=PUW38_19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19830 CP118116.1 Protein Homology CDS 4088783 4089151 . + 0 ID=cds-WJG80844.1;Parent=gene-PUW38_19830;Dbxref=NCBI_GP:WJG80844.1;Name=WJG80844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=PUW38_19830;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WJG80844.1;transl_table=11 CP118116.1 Genbank gene 4089410 4090726 . + . ID=gene-PUW38_19835;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=PUW38_19835 CP118116.1 Protein Homology CDS 4089410 4090726 . + 0 ID=cds-WJG80845.1;Parent=gene-PUW38_19835;Dbxref=NCBI_GP:WJG80845.1;Name=WJG80845.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=PUW38_19835;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WJG80845.1;transl_table=11 CP118116.1 Genbank gene 4090831 4091718 . + . ID=gene-PUW38_19840;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=PUW38_19840 CP118116.1 Protein Homology CDS 4090831 4091718 . + 0 ID=cds-WJG80846.1;Parent=gene-PUW38_19840;Dbxref=NCBI_GP:WJG80846.1;Name=WJG80846.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=PUW38_19840;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WJG80846.1;transl_table=11 CP118116.1 Genbank gene 4091715 4092560 . + . ID=gene-PUW38_19845;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=PUW38_19845 CP118116.1 Protein Homology CDS 4091715 4092560 . + 0 ID=cds-WJG80847.1;Parent=gene-PUW38_19845;Dbxref=NCBI_GP:WJG80847.1;Name=WJG80847.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=PUW38_19845;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WJG80847.1;transl_table=11 CP118116.1 Genbank gene 4092562 4093632 . + . ID=gene-PUW38_19850;Name=PUW38_19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19850 CP118116.1 Protein Homology CDS 4092562 4093632 . + 0 ID=cds-WJG80848.1;Parent=gene-PUW38_19850;Dbxref=NCBI_GP:WJG80848.1;Name=WJG80848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=PUW38_19850;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WJG80848.1;transl_table=11 CP118116.1 Genbank gene 4093629 4094369 . + . ID=gene-PUW38_19855;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=PUW38_19855 CP118116.1 Protein Homology CDS 4093629 4094369 . + 0 ID=cds-WJG80849.1;Parent=gene-PUW38_19855;Dbxref=NCBI_GP:WJG80849.1;Name=WJG80849.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=PUW38_19855;product=glycerophosphodiester phosphodiesterase;protein_id=WJG80849.1;transl_table=11 CP118116.1 Genbank gene 4094382 4094798 . - . ID=gene-PUW38_19860;Name=PUW38_19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19860 CP118116.1 Protein Homology CDS 4094382 4094798 . - 0 ID=cds-WJG80850.1;Parent=gene-PUW38_19860;Dbxref=NCBI_GP:WJG80850.1;Name=WJG80850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=PUW38_19860;product=DUF2756 family protein;protein_id=WJG80850.1;transl_table=11 CP118116.1 Genbank gene 4094924 4096666 . + . ID=gene-PUW38_19865;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=PUW38_19865 CP118116.1 Protein Homology CDS 4094924 4096666 . + 0 ID=cds-WJG80851.1;Parent=gene-PUW38_19865;Dbxref=NCBI_GP:WJG80851.1;Name=WJG80851.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=PUW38_19865;product=gamma-glutamyltransferase;protein_id=WJG80851.1;transl_table=11 CP118116.1 Genbank pseudogene 4096711 4097744 . - . ID=gene-PUW38_19870;Name=PUW38_19870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19870;pseudo=true CP118116.1 Protein Homology CDS 4096711 4097744 . - 0 ID=cds-PUW38_19870;Parent=gene-PUW38_19870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=PUW38_19870;product=phosphotriesterase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4097741 4098712 . - . ID=gene-PUW38_19875;Name=PUW38_19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19875 CP118116.1 Protein Homology CDS 4097741 4098712 . - 0 ID=cds-WJG80852.1;Parent=gene-PUW38_19875;Dbxref=NCBI_GP:WJG80852.1;Name=WJG80852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=PUW38_19875;product=DMT family transporter;protein_id=WJG80852.1;transl_table=11 CP118116.1 Genbank gene 4098766 4099527 . - . ID=gene-PUW38_19880;Name=PUW38_19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19880 CP118116.1 Protein Homology CDS 4098766 4099527 . - 0 ID=cds-WJG80853.1;Parent=gene-PUW38_19880;Dbxref=NCBI_GP:WJG80853.1;Name=WJG80853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=PUW38_19880;product=glutamine amidotransferase;protein_id=WJG80853.1;transl_table=11 CP118116.1 Genbank pseudogene 4099543 4100756 . - . ID=gene-PUW38_19885;Name=PUW38_19885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19885;pseudo=true CP118116.1 Protein Homology CDS 4099543 4100756 . - 0 ID=cds-PUW38_19885;Parent=gene-PUW38_19885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=PUW38_19885;product=PfkB family carbohydrate kinase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4101021 4101509 . - . ID=gene-PUW38_19890;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=PUW38_19890 CP118116.1 Protein Homology CDS 4101021 4101509 . - 0 ID=cds-WJG80854.1;Parent=gene-PUW38_19890;Dbxref=NCBI_GP:WJG80854.1;Name=WJG80854.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=PUW38_19890;product=N-acetyltransferase;protein_id=WJG80854.1;transl_table=11 CP118116.1 Genbank gene 4101976 4103013 . + . ID=gene-PUW38_19895;Name=PUW38_19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19895 CP118116.1 Protein Homology CDS 4101976 4103013 . + 0 ID=cds-WJG80855.1;Parent=gene-PUW38_19895;Dbxref=NCBI_GP:WJG80855.1;Name=WJG80855.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=PUW38_19895;product=oxidoreductase;protein_id=WJG80855.1;transl_table=11 CP118116.1 Genbank gene 4103137 4103832 . + . ID=gene-PUW38_19900;Name=PUW38_19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19900 CP118116.1 Protein Homology CDS 4103137 4103832 . + 0 ID=cds-WJG80856.1;Parent=gene-PUW38_19900;Dbxref=NCBI_GP:WJG80856.1;Name=WJG80856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=PUW38_19900;product=pirin family protein;protein_id=WJG80856.1;transl_table=11 CP118116.1 Genbank gene 4104203 4105198 . + . ID=gene-PUW38_19905;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=PUW38_19905 CP118116.1 Protein Homology CDS 4104203 4105198 . + 0 ID=cds-WJG80857.1;Parent=gene-PUW38_19905;Dbxref=NCBI_GP:WJG80857.1;Name=WJG80857.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=PUW38_19905;product=gluconate operon transcriptional repressor GntR;protein_id=WJG80857.1;transl_table=11 CP118116.1 Genbank gene 4105337 4105870 . + . ID=gene-PUW38_19910;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=PUW38_19910 CP118116.1 Protein Homology CDS 4105337 4105870 . + 0 ID=cds-WJG80858.1;Parent=gene-PUW38_19910;Dbxref=NCBI_GP:WJG80858.1;Name=WJG80858.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=PUW38_19910;product=gluconokinase;protein_id=WJG80858.1;transl_table=11 CP118116.1 Genbank gene 4105867 4107207 . + . ID=gene-PUW38_19915;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=PUW38_19915 CP118116.1 Protein Homology CDS 4105867 4107207 . + 0 ID=cds-WJG80859.1;Parent=gene-PUW38_19915;Dbxref=NCBI_GP:WJG80859.1;Name=WJG80859.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=PUW38_19915;product=gluconate transporter;protein_id=WJG80859.1;transl_table=11 CP118116.1 Genbank pseudogene 4107130 4107504 . - . ID=gene-PUW38_19920;Name=PUW38_19920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19920;pseudo=true CP118116.1 Protein Homology CDS 4107130 4107504 . - 0 ID=cds-PUW38_19920;Parent=gene-PUW38_19920;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=PUW38_19920;product=MarC family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4107691 4108580 . + . ID=gene-PUW38_19925;Name=asd;gbkey=Gene;gene=asd;gene_biotype=pseudogene;locus_tag=PUW38_19925;pseudo=true CP118116.1 Protein Homology CDS 4107691 4108580 . + 0 ID=cds-PUW38_19925;Parent=gene-PUW38_19925;Note=frameshifted;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: protein motif:HMM:NF005144.0;locus_tag=PUW38_19925;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4108502 4108735 . + . ID=gene-PUW38_19930;Name=PUW38_19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19930 CP118116.1 Protein Homology CDS 4108502 4108735 . + 0 ID=cds-WJG80860.1;Parent=gene-PUW38_19930;Dbxref=NCBI_GP:WJG80860.1;Name=WJG80860.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: protein motif:HMM:NF014793.2;locus_tag=PUW38_19930;product=Asd/ArgC dimerization domain-containing protein;protein_id=WJG80860.1;transl_table=11 CP118116.1 Genbank pseudogene 4109082 4111216 . + . ID=gene-PUW38_19935;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=pseudogene;locus_tag=PUW38_19935;pseudo=true CP118116.1 Protein Homology CDS 4109082 4111216 . + 0 ID=cds-PUW38_19935;Parent=gene-PUW38_19935;Note=frameshifted;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=PUW38_19935;product=1%2C4-alpha-glucan branching enzyme;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4111213 4113189 . + . ID=gene-PUW38_19940;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PUW38_19940 CP118116.1 Protein Homology CDS 4111213 4113189 . + 0 ID=cds-WJG80861.1;Parent=gene-PUW38_19940;Dbxref=NCBI_GP:WJG80861.1;Name=WJG80861.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=PUW38_19940;product=glycogen debranching protein GlgX;protein_id=WJG80861.1;transl_table=11 CP118116.1 Genbank pseudogene 4113204 4114488 . + . ID=gene-PUW38_19945;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=pseudogene;locus_tag=PUW38_19945;pseudo=true CP118116.1 Protein Homology CDS 4113204 4114488 . + 0 ID=cds-PUW38_19945;Parent=gene-PUW38_19945;Note=frameshifted;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=PUW38_19945;product=glucose-1-phosphate adenylyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4114488 4115924 . + . ID=gene-PUW38_19950;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=PUW38_19950 CP118116.1 Protein Homology CDS 4114488 4115924 . + 0 ID=cds-WJG80862.1;Parent=gene-PUW38_19950;Dbxref=NCBI_GP:WJG80862.1;Name=WJG80862.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=PUW38_19950;product=glycogen synthase GlgA;protein_id=WJG80862.1;transl_table=11 CP118116.1 Genbank gene 4115944 4118391 . + . ID=gene-PUW38_19955;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=PUW38_19955 CP118116.1 Protein Homology CDS 4115944 4118391 . + 0 ID=cds-WJG80863.1;Parent=gene-PUW38_19955;Dbxref=NCBI_GP:WJG80863.1;Name=WJG80863.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=PUW38_19955;product=glycogen phosphorylase;protein_id=WJG80863.1;transl_table=11 CP118116.1 Genbank gene 4118569 4119324 . + . ID=gene-PUW38_19960;Name=PUW38_19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19960 CP118116.1 Protein Homology CDS 4118569 4119324 . + 0 ID=cds-WJG80864.1;Parent=gene-PUW38_19960;Dbxref=NCBI_GP:WJG80864.1;Name=WJG80864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=PUW38_19960;product=IclR family transcriptional regulator;protein_id=WJG80864.1;transl_table=11 CP118116.1 Genbank pseudogene 4119368 4120272 . - . ID=gene-PUW38_19965;Name=PUW38_19965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_19965;pseudo=true CP118116.1 Protein Homology CDS 4119368 4120272 . - 0 ID=cds-PUW38_19965;Parent=gene-PUW38_19965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=PUW38_19965;product=dihydrodipicolinate synthase family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4120316 4122031 . - . ID=gene-PUW38_19970;Name=PUW38_19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19970 CP118116.1 Protein Homology CDS 4120316 4122031 . - 0 ID=cds-WJG80865.1;Parent=gene-PUW38_19970;Dbxref=NCBI_GP:WJG80865.1;Name=WJG80865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=PUW38_19970;product=dihydroxy-acid dehydratase;protein_id=WJG80865.1;transl_table=11 CP118116.1 Genbank gene 4122028 4123362 . - . ID=gene-PUW38_19975;Name=PUW38_19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19975 CP118116.1 Protein Homology CDS 4122028 4123362 . - 0 ID=cds-WJG80866.1;Parent=gene-PUW38_19975;Dbxref=NCBI_GP:WJG80866.1;Name=WJG80866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=PUW38_19975;product=MFS transporter;protein_id=WJG80866.1;transl_table=11 CP118116.1 Genbank gene 4123700 4124809 . + . ID=gene-PUW38_19980;Name=PUW38_19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19980 CP118116.1 Protein Homology CDS 4123700 4124809 . + 0 ID=cds-WJG80867.1;Parent=gene-PUW38_19980;Dbxref=NCBI_GP:WJG80867.1;Name=WJG80867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=PUW38_19980;product=glycerol dehydrogenase;protein_id=WJG80867.1;transl_table=11 CP118116.1 Genbank gene 4124967 4126463 . + . ID=gene-PUW38_19985;Name=PUW38_19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19985 CP118116.1 Protein Homology CDS 4124967 4126463 . + 0 ID=cds-WJG80868.1;Parent=gene-PUW38_19985;Dbxref=NCBI_GP:WJG80868.1;Name=WJG80868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=PUW38_19985;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WJG80868.1;transl_table=11 CP118116.1 Genbank gene 4126473 4127018 . + . ID=gene-PUW38_19990;Name=PUW38_19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_19990 CP118116.1 Protein Homology CDS 4126473 4127018 . + 0 ID=cds-WJG80869.1;Parent=gene-PUW38_19990;Dbxref=NCBI_GP:WJG80869.1;Name=WJG80869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=PUW38_19990;product=hypothetical protein;protein_id=WJG80869.1;transl_table=11 CP118116.1 Genbank gene 4127065 4128573 . - . ID=gene-PUW38_19995;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=PUW38_19995 CP118116.1 Protein Homology CDS 4127065 4128573 . - 0 ID=cds-WJG80870.1;Parent=gene-PUW38_19995;Dbxref=NCBI_GP:WJG80870.1;Name=WJG80870.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=PUW38_19995;product=glycerol-3-phosphate dehydrogenase;protein_id=WJG80870.1;transl_table=11 CP118116.1 Genbank gene 4128772 4129098 . + . ID=gene-PUW38_20000;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=PUW38_20000 CP118116.1 Protein Homology CDS 4128772 4129098 . + 0 ID=cds-WJG80871.1;Parent=gene-PUW38_20000;Dbxref=NCBI_GP:WJG80871.1;Name=WJG80871.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=PUW38_20000;product=thiosulfate sulfurtransferase GlpE;protein_id=WJG80871.1;transl_table=11 CP118116.1 Genbank gene 4129174 4130004 . + . ID=gene-PUW38_20005;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=PUW38_20005 CP118116.1 Protein Homology CDS 4129174 4130004 . + 0 ID=cds-WJG80872.1;Parent=gene-PUW38_20005;Dbxref=NCBI_GP:WJG80872.1;Name=WJG80872.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=PUW38_20005;product=rhomboid family intramembrane serine protease GlpG;protein_id=WJG80872.1;transl_table=11 CP118116.1 Genbank gene 4130098 4130856 . + . ID=gene-PUW38_20010;Name=PUW38_20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20010 CP118116.1 Protein Homology CDS 4130098 4130856 . + 0 ID=cds-WJG80873.1;Parent=gene-PUW38_20010;Dbxref=NCBI_GP:WJG80873.1;Name=WJG80873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=PUW38_20010;product=DeoR/GlpR family transcriptional regulator;protein_id=WJG80873.1;transl_table=11 CP118116.1 Genbank gene 4130853 4132436 . - . ID=gene-PUW38_20015;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=PUW38_20015 CP118116.1 Protein Homology CDS 4130853 4132436 . - 0 ID=cds-WJG80874.1;Parent=gene-PUW38_20015;Dbxref=NCBI_GP:WJG80874.1;Name=WJG80874.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=PUW38_20015;product=RNA repair transcriptional activator RtcR;protein_id=WJG80874.1;transl_table=11 CP118116.1 Genbank gene 4132626 4134179 . + . ID=gene-PUW38_20020;Name=PUW38_20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20020 CP118116.1 Protein Homology CDS 4132626 4134179 . + 0 ID=cds-WJG80875.1;Parent=gene-PUW38_20020;Dbxref=NCBI_GP:WJG80875.1;Name=WJG80875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=PUW38_20020;product=TROVE domain-containing protein;protein_id=WJG80875.1;transl_table=11 CP118116.1 Genbank gene 4134526 4135740 . + . ID=gene-PUW38_20025;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=PUW38_20025 CP118116.1 Protein Homology CDS 4134526 4135740 . + 0 ID=cds-WJG83297.1;Parent=gene-PUW38_20025;Dbxref=NCBI_GP:WJG83297.1;Name=WJG83297.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=PUW38_20025;product=RNA-splicing ligase RtcB;protein_id=WJG83297.1;transl_table=11 CP118116.1 Genbank gene 4135744 4136763 . + . ID=gene-PUW38_20030;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=PUW38_20030 CP118116.1 Protein Homology CDS 4135744 4136763 . + 0 ID=cds-WJG80876.1;Parent=gene-PUW38_20030;Dbxref=NCBI_GP:WJG80876.1;Name=WJG80876.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462421.1;locus_tag=PUW38_20030;product=RNA 3'-terminal phosphate cyclase;protein_id=WJG80876.1;transl_table=11 CP118116.1 Genbank gene 4136872 4137132 . + . ID=gene-PUW38_20035;Name=PUW38_20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20035 CP118116.1 Protein Homology CDS 4136872 4137132 . + 0 ID=cds-WJG80877.1;Parent=gene-PUW38_20035;Dbxref=NCBI_GP:WJG80877.1;Name=WJG80877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462420.1;locus_tag=PUW38_20035;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WJG80877.1;transl_table=11 CP118116.1 Genbank gene 4137135 4137410 . + . ID=gene-PUW38_20040;Name=PUW38_20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20040 CP118116.1 Protein Homology CDS 4137135 4137410 . + 0 ID=cds-WJG80878.1;Parent=gene-PUW38_20040;Dbxref=NCBI_GP:WJG80878.1;Name=WJG80878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462419.1;locus_tag=PUW38_20040;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WJG80878.1;transl_table=11 CP118116.1 Genbank gene 4137498 4140203 . - . ID=gene-PUW38_20045;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=PUW38_20045 CP118116.1 Protein Homology CDS 4137498 4140203 . - 0 ID=cds-WJG80879.1;Parent=gene-PUW38_20045;Dbxref=NCBI_GP:WJG80879.1;Name=WJG80879.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=PUW38_20045;product=HTH-type transcriptional regulator MalT;protein_id=WJG80879.1;transl_table=11 CP118116.1 Genbank gene 4140797 4143190 . + . ID=gene-PUW38_20050;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=PUW38_20050 CP118116.1 Protein Homology CDS 4140797 4143190 . + 0 ID=cds-WJG80880.1;Parent=gene-PUW38_20050;Dbxref=NCBI_GP:WJG80880.1;Name=WJG80880.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=PUW38_20050;product=maltodextrin phosphorylase;protein_id=WJG80880.1;transl_table=11 CP118116.1 Genbank gene 4143200 4145278 . + . ID=gene-PUW38_20055;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=PUW38_20055 CP118116.1 Protein Homology CDS 4143200 4145278 . + 0 ID=cds-WJG80881.1;Parent=gene-PUW38_20055;Dbxref=NCBI_GP:WJG80881.1;Name=WJG80881.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=PUW38_20055;product=4-alpha-glucanotransferase;protein_id=WJG80881.1;transl_table=11 CP118116.1 Genbank pseudogene 4145397 4146712 . - . ID=gene-PUW38_20060;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=pseudogene;locus_tag=PUW38_20060;pseudo=true CP118116.1 Protein Homology CDS 4145397 4146712 . - 0 ID=cds-PUW38_20060;Parent=gene-PUW38_20060;Note=frameshifted;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=PUW38_20060;product=gluconate transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4147089 4147664 . - . ID=gene-PUW38_20065;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=PUW38_20065 CP118116.1 Protein Homology CDS 4147089 4147664 . - 0 ID=cds-WJG80882.1;Parent=gene-PUW38_20065;Dbxref=NCBI_GP:WJG80882.1;Name=WJG80882.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=PUW38_20065;product=Fe-S biogenesis protein NfuA;protein_id=WJG80882.1;transl_table=11 CP118116.1 Genbank gene 4147723 4148406 . - . ID=gene-PUW38_20070;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=PUW38_20070 CP118116.1 Protein Homology CDS 4147723 4148406 . - 0 ID=cds-WJG80883.1;Parent=gene-PUW38_20070;Dbxref=NCBI_GP:WJG80883.1;Name=WJG80883.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=PUW38_20070;product=DNA utilization protein GntX;protein_id=WJG80883.1;transl_table=11 CP118116.1 Genbank gene 4148444 4149214 . + . ID=gene-PUW38_20075;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=PUW38_20075 CP118116.1 Protein Homology CDS 4148444 4149214 . + 0 ID=cds-WJG80884.1;Parent=gene-PUW38_20075;Dbxref=NCBI_GP:WJG80884.1;Name=WJG80884.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=PUW38_20075;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WJG80884.1;transl_table=11 CP118116.1 Genbank gene 4149250 4150176 . - . ID=gene-PUW38_20080;Name=PUW38_20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20080 CP118116.1 Protein Homology CDS 4149250 4150176 . - 0 ID=cds-WJG80885.1;Parent=gene-PUW38_20080;Dbxref=NCBI_GP:WJG80885.1;Name=WJG80885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=PUW38_20080;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG80885.1;transl_table=11 CP118116.1 Genbank gene 4150411 4150647 . - . ID=gene-PUW38_20085;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=PUW38_20085 CP118116.1 Protein Homology CDS 4150411 4150647 . - 0 ID=cds-WJG80886.1;Parent=gene-PUW38_20085;Dbxref=NCBI_GP:WJG80886.1;Name=WJG80886.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=PUW38_20085;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WJG80886.1;transl_table=11 CP118116.1 Genbank gene 4150660 4152978 . - . ID=gene-PUW38_20090;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=PUW38_20090 CP118116.1 Protein Homology CDS 4150660 4152978 . - 0 ID=cds-WJG80887.1;Parent=gene-PUW38_20090;Dbxref=NCBI_GP:WJG80887.1;Name=WJG80887.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=PUW38_20090;product=Fe(2+) transporter permease subunit FeoB;protein_id=WJG80887.1;transl_table=11 CP118116.1 Genbank gene 4152997 4153224 . - . ID=gene-PUW38_20095;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=PUW38_20095 CP118116.1 Protein Homology CDS 4152997 4153224 . - 0 ID=cds-WJG80888.1;Parent=gene-PUW38_20095;Dbxref=NCBI_GP:WJG80888.1;Name=WJG80888.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=PUW38_20095;product=ferrous iron transporter A;protein_id=WJG80888.1;transl_table=11 CP118116.1 Genbank gene 4153661 4155991 . - . ID=gene-PUW38_20100;Name=PUW38_20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20100 CP118116.1 Protein Homology CDS 4153661 4155991 . - 0 ID=cds-WJG80889.1;Parent=gene-PUW38_20100;Dbxref=NCBI_GP:WJG80889.1;Name=WJG80889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=PUW38_20100;product=Tex family protein;protein_id=WJG80889.1;transl_table=11 CP118116.1 Genbank gene 4156090 4156563 . - . ID=gene-PUW38_20105;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=PUW38_20105 CP118116.1 Protein Homology CDS 4156090 4156563 . - 0 ID=cds-WJG80890.1;Parent=gene-PUW38_20105;Dbxref=NCBI_GP:WJG80890.1;Name=WJG80890.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=PUW38_20105;product=transcription elongation factor GreB;protein_id=WJG80890.1;transl_table=11 CP118116.1 Genbank gene 4156789 4157223 . + . ID=gene-PUW38_20110;Name=PUW38_20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20110 CP118116.1 Protein Homology CDS 4156789 4157223 . + 0 ID=cds-WJG80891.1;Parent=gene-PUW38_20110;Dbxref=NCBI_GP:WJG80891.1;Name=WJG80891.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PUW38_20110;product=response regulator;protein_id=WJG80891.1;transl_table=11 CP118116.1 Genbank gene 4157241 4157507 . + . ID=gene-PUW38_20115;Name=PUW38_20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20115 CP118116.1 Protein Homology CDS 4157241 4157507 . + 0 ID=cds-WJG80892.1;Parent=gene-PUW38_20115;Dbxref=NCBI_GP:WJG80892.1;Name=WJG80892.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002423495.1;locus_tag=PUW38_20115;product=winged helix-turn-helix domain-containing protein;protein_id=WJG80892.1;transl_table=11 CP118116.1 Genbank gene 4157504 4158856 . + . ID=gene-PUW38_20120;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=PUW38_20120 CP118116.1 Protein Homology CDS 4157504 4158856 . + 0 ID=cds-WJG80893.1;Parent=gene-PUW38_20120;Dbxref=NCBI_GP:WJG80893.1;Name=WJG80893.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=PUW38_20120;product=two-component system sensor histidine kinase EnvZ;protein_id=WJG80893.1;transl_table=11 CP118116.1 Genbank gene 4158931 4160550 . - . ID=gene-PUW38_20125;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=PUW38_20125 CP118116.1 Protein Homology CDS 4158931 4160550 . - 0 ID=cds-WJG80894.1;Parent=gene-PUW38_20125;Dbxref=NCBI_GP:WJG80894.1;Name=WJG80894.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=PUW38_20125;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WJG80894.1;transl_table=11 CP118116.1 Genbank gene 4160930 4162639 . + . ID=gene-PUW38_20130;Name=PUW38_20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20130 CP118116.1 Protein Homology CDS 4160930 4162639 . + 0 ID=cds-WJG80895.1;Parent=gene-PUW38_20130;Dbxref=NCBI_GP:WJG80895.1;Name=WJG80895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=PUW38_20130;product=DUF4153 domain-containing protein;protein_id=WJG80895.1;transl_table=11 CP118116.1 Genbank gene 4162748 4163626 . - . ID=gene-PUW38_20135;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=PUW38_20135 CP118116.1 Protein Homology CDS 4162748 4163626 . - 0 ID=cds-WJG80896.1;Parent=gene-PUW38_20135;Dbxref=NCBI_GP:WJG80896.1;Name=WJG80896.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=PUW38_20135;product=Hsp33 family molecular chaperone HslO;protein_id=WJG80896.1;transl_table=11 CP118116.1 Genbank gene 4163651 4164052 . - . ID=gene-PUW38_20140;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=PUW38_20140 CP118116.1 Protein Homology CDS 4163651 4164052 . - 0 ID=cds-WJG80897.1;Parent=gene-PUW38_20140;Dbxref=NCBI_GP:WJG80897.1;Name=WJG80897.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=PUW38_20140;product=ribosome-associated heat shock protein Hsp15;protein_id=WJG80897.1;transl_table=11 CP118116.1 Genbank gene 4164063 4164731 . - . ID=gene-PUW38_20145;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=PUW38_20145 CP118116.1 Protein Homology CDS 4164063 4164731 . - 0 ID=cds-WJG80898.1;Parent=gene-PUW38_20145;Dbxref=NCBI_GP:WJG80898.1;Name=WJG80898.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=PUW38_20145;product=GMP/IMP nucleotidase;protein_id=WJG80898.1;transl_table=11 CP118116.1 Genbank gene 4164796 4166928 . - . ID=gene-PUW38_20150;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=PUW38_20150 CP118116.1 Protein Homology CDS 4164796 4166928 . - 0 ID=cds-WJG80899.1;Parent=gene-PUW38_20150;Dbxref=NCBI_GP:WJG80899.1;Name=WJG80899.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=PUW38_20150;product=intracellular growth attenuator protein IgaA;protein_id=WJG80899.1;transl_table=11 CP118116.1 Genbank gene 4167251 4167814 . + . ID=gene-PUW38_20155;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=PUW38_20155 CP118116.1 Protein Homology CDS 4167251 4167814 . + 0 ID=cds-WJG80900.1;Parent=gene-PUW38_20155;Dbxref=NCBI_GP:WJG80900.1;Name=WJG80900.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=PUW38_20155;product=ADP compounds hydrolase NudE;protein_id=WJG80900.1;transl_table=11 CP118116.1 Genbank gene 4167910 4170462 . - . ID=gene-PUW38_20160;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=PUW38_20160 CP118116.1 Protein Homology CDS 4167910 4170462 . - 0 ID=cds-WJG80901.1;Parent=gene-PUW38_20160;Dbxref=NCBI_GP:WJG80901.1;Name=WJG80901.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=PUW38_20160;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WJG80901.1;transl_table=11 CP118116.1 Genbank gene 4170583 4171362 . + . ID=gene-PUW38_20165;Name=PUW38_20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20165 CP118116.1 Protein Homology CDS 4170583 4171362 . + 0 ID=cds-WJG80902.1;Parent=gene-PUW38_20165;Dbxref=NCBI_GP:WJG80902.1;Name=WJG80902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=PUW38_20165;product=DNA utilization protein HofM;protein_id=WJG80902.1;transl_table=11 CP118116.1 Genbank gene 4171362 4171901 . + . ID=gene-PUW38_20170;Name=PUW38_20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20170 CP118116.1 Protein Homology CDS 4171362 4171901 . + 0 ID=cds-WJG80903.1;Parent=gene-PUW38_20170;Dbxref=NCBI_GP:WJG80903.1;Name=WJG80903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=PUW38_20170;product=PilN domain-containing protein;protein_id=WJG80903.1;transl_table=11 CP118116.1 Genbank gene 4171885 4172358 . + . ID=gene-PUW38_20175;Name=PUW38_20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20175 CP118116.1 Protein Homology CDS 4171885 4172358 . + 0 ID=cds-WJG80904.1;Parent=gene-PUW38_20175;Dbxref=NCBI_GP:WJG80904.1;Name=WJG80904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=PUW38_20175;product=hypothetical protein;protein_id=WJG80904.1;transl_table=11 CP118116.1 Genbank gene 4172348 4172749 . + . ID=gene-PUW38_20180;Name=PUW38_20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20180 CP118116.1 Protein Homology CDS 4172348 4172749 . + 0 ID=cds-WJG80905.1;Parent=gene-PUW38_20180;Dbxref=NCBI_GP:WJG80905.1;Name=WJG80905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=PUW38_20180;product=DUF2531 family protein;protein_id=WJG80905.1;transl_table=11 CP118116.1 Genbank pseudogene 4172664 4173899 . + . ID=gene-PUW38_20185;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=PUW38_20185;pseudo=true CP118116.1 Protein Homology CDS 4172664 4173899 . + 0 ID=cds-PUW38_20185;Parent=gene-PUW38_20185;Note=frameshifted;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=PUW38_20185;product=DNA uptake porin HofQ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4174363 4174884 . + . ID=gene-PUW38_20190;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=PUW38_20190 CP118116.1 Protein Homology CDS 4174363 4174884 . + 0 ID=cds-WJG80906.1;Parent=gene-PUW38_20190;Dbxref=NCBI_GP:WJG80906.1;Name=WJG80906.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=PUW38_20190;product=shikimate kinase AroK;protein_id=WJG80906.1;transl_table=11 CP118116.1 Genbank gene 4174941 4176029 . + . ID=gene-PUW38_20195;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=PUW38_20195 CP118116.1 Protein Homology CDS 4174941 4176029 . + 0 ID=cds-WJG80907.1;Parent=gene-PUW38_20195;Dbxref=NCBI_GP:WJG80907.1;Name=WJG80907.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=PUW38_20195;product=3-dehydroquinate synthase;protein_id=WJG80907.1;transl_table=11 CP118116.1 Genbank gene 4176127 4177404 . + . ID=gene-PUW38_20200;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=PUW38_20200 CP118116.1 Protein Homology CDS 4176127 4177404 . + 0 ID=cds-WJG80908.1;Parent=gene-PUW38_20200;Dbxref=NCBI_GP:WJG80908.1;Name=WJG80908.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=PUW38_20200;product=cell division protein DamX;protein_id=WJG80908.1;transl_table=11 CP118116.1 Genbank pseudogene 4177587 4178420 . + . ID=gene-PUW38_20205;Name=dam;gbkey=Gene;gene=dam;gene_biotype=pseudogene;locus_tag=PUW38_20205;pseudo=true CP118116.1 Protein Homology CDS 4177587 4178420 . + 0 ID=cds-PUW38_20205;Parent=gene-PUW38_20205;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=PUW38_20205;product=adenine-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4178438 4179115 . + . ID=gene-PUW38_20210;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=PUW38_20210 CP118116.1 Protein Homology CDS 4178438 4179115 . + 0 ID=cds-WJG80909.1;Parent=gene-PUW38_20210;Dbxref=NCBI_GP:WJG80909.1;Name=WJG80909.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=PUW38_20210;product=ribulose-phosphate 3-epimerase;protein_id=WJG80909.1;transl_table=11 CP118116.1 Genbank gene 4179108 4179866 . + . ID=gene-PUW38_20215;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=PUW38_20215 CP118116.1 Protein Homology CDS 4179108 4179866 . + 0 ID=cds-WJG80910.1;Parent=gene-PUW38_20215;Dbxref=NCBI_GP:WJG80910.1;Name=WJG80910.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=PUW38_20215;product=phosphoglycolate phosphatase;protein_id=WJG80910.1;transl_table=11 CP118116.1 Genbank gene 4179859 4180863 . + . ID=gene-PUW38_20220;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PUW38_20220 CP118116.1 Protein Homology CDS 4179859 4180863 . + 0 ID=cds-WJG80911.1;Parent=gene-PUW38_20220;Dbxref=NCBI_GP:WJG80911.1;Name=WJG80911.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=PUW38_20220;product=tryptophan--tRNA ligase;protein_id=WJG80911.1;transl_table=11 CP118116.1 Genbank gene 4181006 4181176 . - . ID=gene-PUW38_20225;Name=PUW38_20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20225 CP118116.1 Protein Homology CDS 4181006 4181176 . - 0 ID=cds-WJG80912.1;Parent=gene-PUW38_20225;Dbxref=NCBI_GP:WJG80912.1;Name=WJG80912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=PUW38_20225;product=YhfL family protein;protein_id=WJG80912.1;transl_table=11 CP118116.1 Genbank pseudogene 4181369 4187141 . - . ID=gene-PUW38_20230;Name=bigA;gbkey=Gene;gene=bigA;gene_biotype=pseudogene;locus_tag=PUW38_20230;pseudo=true CP118116.1 Protein Homology CDS 4181369 4187141 . - 0 ID=cds-PUW38_20230;Parent=gene-PUW38_20230;Note=frameshifted;gbkey=CDS;gene=bigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=PUW38_20230;product=autotransporter adhesin BigA;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4187470 4188842 . - . ID=gene-PUW38_20235;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=pseudogene;locus_tag=PUW38_20235;pseudo=true CP118116.1 Protein Homology CDS 4187470 4188842 . - 0 ID=cds-PUW38_20235;Parent=gene-PUW38_20235;Note=frameshifted;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=PUW38_20235;product=siroheme synthase CysG;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4188854 4189663 . - . ID=gene-PUW38_20240;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=PUW38_20240 CP118116.1 Protein Homology CDS 4188854 4189663 . - 0 ID=cds-WJG80913.1;Parent=gene-PUW38_20240;Dbxref=NCBI_GP:WJG80913.1;Name=WJG80913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442185.1;locus_tag=PUW38_20240;product=nitrite transporter NirC;protein_id=WJG80913.1;transl_table=11 CP118116.1 Genbank gene 4189858 4190184 . - . ID=gene-PUW38_20245;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=PUW38_20245 CP118116.1 Protein Homology CDS 4189858 4190184 . - 0 ID=cds-WJG80914.1;Parent=gene-PUW38_20245;Dbxref=NCBI_GP:WJG80914.1;Name=WJG80914.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=PUW38_20245;product=nitrite reductase small subunit NirD;protein_id=WJG80914.1;transl_table=11 CP118116.1 Genbank pseudogene 4190181 4192723 . - . ID=gene-PUW38_20250;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=pseudogene;locus_tag=PUW38_20250;pseudo=true CP118116.1 Protein Homology CDS 4190181 4192723 . - 0 ID=cds-PUW38_20250;Parent=gene-PUW38_20250;Note=frameshifted;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=PUW38_20250;product=NADPH-nitrite reductase large subunit;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4192986 4194167 . - . ID=gene-PUW38_20255;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=PUW38_20255 CP118116.1 Protein Homology CDS 4192986 4194167 . - 0 ID=cds-WJG80915.1;Parent=gene-PUW38_20255;Dbxref=NCBI_GP:WJG80915.1;Name=WJG80915.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=PUW38_20255;product=MFS transporter TsgA;protein_id=WJG80915.1;transl_table=11 CP118116.1 Genbank gene 4194444 4195016 . + . ID=gene-PUW38_20260;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=PUW38_20260 CP118116.1 Protein Homology CDS 4194444 4195016 . + 0 ID=cds-WJG80916.1;Parent=gene-PUW38_20260;Dbxref=NCBI_GP:WJG80916.1;Name=WJG80916.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=PUW38_20260;product=peptidylprolyl isomerase A;protein_id=WJG80916.1;transl_table=11 CP118116.1 Genbank gene 4195125 4195292 . + . ID=gene-PUW38_20265;Name=PUW38_20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20265 CP118116.1 Protein Homology CDS 4195125 4195292 . + 0 ID=cds-WJG80917.1;Parent=gene-PUW38_20265;Dbxref=NCBI_GP:WJG80917.1;Name=WJG80917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=PUW38_20265;product=YhfG family protein;protein_id=WJG80917.1;transl_table=11 CP118116.1 Genbank gene 4195282 4195884 . + . ID=gene-PUW38_20270;Name=PUW38_20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20270 CP118116.1 Protein Homology CDS 4195282 4195884 . + 0 ID=cds-WJG80918.1;Parent=gene-PUW38_20270;Dbxref=NCBI_GP:WJG80918.1;Name=WJG80918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=PUW38_20270;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WJG80918.1;transl_table=11 CP118116.1 Genbank gene 4195916 4196479 . + . ID=gene-PUW38_20275;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=PUW38_20275 CP118116.1 Protein Homology CDS 4195916 4196479 . + 0 ID=cds-WJG80919.1;Parent=gene-PUW38_20275;Dbxref=NCBI_GP:WJG80919.1;Name=WJG80919.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=PUW38_20275;product=aminodeoxychorismate synthase component 2;protein_id=WJG80919.1;transl_table=11 CP118116.1 Genbank gene 4196565 4197782 . + . ID=gene-PUW38_20280;Name=PUW38_20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20280 CP118116.1 Protein Homology CDS 4196565 4197782 . + 0 ID=cds-WJG80920.1;Parent=gene-PUW38_20280;Dbxref=NCBI_GP:WJG80920.1;Name=WJG80920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=PUW38_20280;product=aspartate aminotransferase family protein;protein_id=WJG80920.1;transl_table=11 CP118116.1 Genbank gene 4197825 4199912 . - . ID=gene-PUW38_20285;Name=PUW38_20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20285 CP118116.1 Protein Homology CDS 4197825 4199912 . - 0 ID=cds-WJG83298.1;Parent=gene-PUW38_20285;Dbxref=NCBI_GP:WJG83298.1;Name=WJG83298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=PUW38_20285;product=YccS/YhfK family putative transporter;protein_id=WJG83298.1;transl_table=11 CP118116.1 Genbank gene 4199961 4200593 . - . ID=gene-PUW38_20290;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=PUW38_20290 CP118116.1 Protein Homology CDS 4199961 4200593 . - 0 ID=cds-WJG80921.1;Parent=gene-PUW38_20290;Dbxref=NCBI_GP:WJG80921.1;Name=WJG80921.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=PUW38_20290;product=cAMP-activated global transcriptional regulator CRP;protein_id=WJG80921.1;transl_table=11 CP118116.1 Genbank gene 4200901 4201305 . + . ID=gene-PUW38_20295;Name=PUW38_20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20295 CP118116.1 Protein Homology CDS 4200901 4201305 . + 0 ID=cds-WJG80922.1;Parent=gene-PUW38_20295;Dbxref=NCBI_GP:WJG80922.1;Name=WJG80922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=PUW38_20295;product=OsmC family protein;protein_id=WJG80922.1;transl_table=11 CP118116.1 Genbank gene 4201342 4202271 . - . ID=gene-PUW38_20300;Name=PUW38_20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20300 CP118116.1 Protein Homology CDS 4201342 4202271 . - 0 ID=cds-WJG80923.1;Parent=gene-PUW38_20300;Dbxref=NCBI_GP:WJG80923.1;Name=WJG80923.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274691.1;locus_tag=PUW38_20300;product=phosphoribulokinase;protein_id=WJG80923.1;transl_table=11 CP118116.1 Genbank pseudogene 4202322 4202539 . - . ID=gene-PUW38_20305;Name=PUW38_20305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_20305;pseudo=true CP118116.1 Protein Homology CDS 4202322 4202539 . - 0 ID=cds-PUW38_20305;Parent=gene-PUW38_20305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=PUW38_20305;product=YheU family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4202536 4203603 . - . ID=gene-PUW38_20310;Name=PUW38_20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20310 CP118116.1 Protein Homology CDS 4202536 4203603 . - 0 ID=cds-WJG80924.1;Parent=gene-PUW38_20310;Dbxref=NCBI_GP:WJG80924.1;Name=WJG80924.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=PUW38_20310;product=hydrolase;protein_id=WJG80924.1;transl_table=11 CP118116.1 Genbank gene 4203801 4204112 . + . ID=gene-PUW38_20315;Name=PUW38_20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20315 CP118116.1 Protein Homology CDS 4203801 4204112 . + 0 ID=cds-WJG80925.1;Parent=gene-PUW38_20315;Dbxref=NCBI_GP:WJG80925.1;Name=WJG80925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=PUW38_20315;product=monooxygenase;protein_id=WJG80925.1;transl_table=11 CP118116.1 Genbank gene 4204114 4204335 . - . ID=gene-PUW38_20320;Name=PUW38_20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20320 CP118116.1 Protein Homology CDS 4204114 4204335 . - 0 ID=cds-WJG80926.1;Parent=gene-PUW38_20320;Dbxref=NCBI_GP:WJG80926.1;Name=WJG80926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=PUW38_20320;product=LysR family transcriptional regulator;protein_id=WJG80926.1;transl_table=11 CP118116.1 Genbank gene 4204498 4206405 . - . ID=gene-PUW38_20325;Name=PUW38_20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20325 CP118116.1 Protein Homology CDS 4204498 4206405 . - 0 ID=cds-WJG80927.1;Parent=gene-PUW38_20325;Dbxref=NCBI_GP:WJG80927.1;Name=WJG80927.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=PUW38_20325;product=ABC transporter ATP-binding protein;protein_id=WJG80927.1;transl_table=11 CP118116.1 Genbank gene 4206671 4207222 . + . ID=gene-PUW38_20330;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=PUW38_20330 CP118116.1 Protein Homology CDS 4206671 4207222 . + 0 ID=cds-WJG80928.1;Parent=gene-PUW38_20330;Dbxref=NCBI_GP:WJG80928.1;Name=WJG80928.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=PUW38_20330;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WJG80928.1;transl_table=11 CP118116.1 Genbank pseudogene 4207222 4209028 . + . ID=gene-PUW38_20335;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=pseudogene;locus_tag=PUW38_20335;pseudo=true CP118116.1 Protein Homology CDS 4207222 4209028 . + 0 ID=cds-PUW38_20335;Parent=gene-PUW38_20335;Note=frameshifted;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=PUW38_20335;product=glutathione-regulated potassium-efflux system protein KefB;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4209038 4209238 . + . ID=gene-PUW38_20340;Name=PUW38_20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20340 CP118116.1 Protein Homology CDS 4209038 4209238 . + 0 ID=cds-WJG80929.1;Parent=gene-PUW38_20340;Dbxref=NCBI_GP:WJG80929.1;Name=WJG80929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=PUW38_20340;product=YheV family putative zinc ribbon protein;protein_id=WJG80929.1;transl_table=11 CP118116.1 Genbank gene 4209333 4209923 . + . ID=gene-PUW38_20345;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=PUW38_20345 CP118116.1 Protein Homology CDS 4209333 4209923 . + 0 ID=cds-WJG80930.1;Parent=gene-PUW38_20345;Dbxref=NCBI_GP:WJG80930.1;Name=WJG80930.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=PUW38_20345;product=peptidylprolyl isomerase;protein_id=WJG80930.1;transl_table=11 CP118116.1 Genbank gene 4210112 4210330 . - . ID=gene-PUW38_20350;Name=PUW38_20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20350 CP118116.1 Protein Homology CDS 4210112 4210330 . - 0 ID=cds-WJG80931.1;Parent=gene-PUW38_20350;Dbxref=NCBI_GP:WJG80931.1;Name=WJG80931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=PUW38_20350;product=SlyX family protein;protein_id=WJG80931.1;transl_table=11 CP118116.1 Genbank gene 4210550 4211368 . + . ID=gene-PUW38_20355;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=PUW38_20355 CP118116.1 Protein Homology CDS 4210550 4211368 . + 0 ID=cds-WJG80932.1;Parent=gene-PUW38_20355;Dbxref=NCBI_GP:WJG80932.1;Name=WJG80932.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=PUW38_20355;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJG80932.1;transl_table=11 CP118116.1 Genbank gene 4211644 4212366 . + . ID=gene-PUW38_20360;Name=PUW38_20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20360 CP118116.1 Protein Homology CDS 4211644 4212366 . + 0 ID=cds-WJG80933.1;Parent=gene-PUW38_20360;Dbxref=NCBI_GP:WJG80933.1;Name=WJG80933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=PUW38_20360;product=transcriptional regulator;protein_id=WJG80933.1;transl_table=11 CP118116.1 Genbank gene 4212366 4212752 . + . ID=gene-PUW38_20365;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=PUW38_20365 CP118116.1 Protein Homology CDS 4212366 4212752 . + 0 ID=cds-WJG80934.1;Parent=gene-PUW38_20365;Dbxref=NCBI_GP:WJG80934.1;Name=WJG80934.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=PUW38_20365;product=sulfurtransferase complex subunit TusD;protein_id=WJG80934.1;transl_table=11 CP118116.1 Genbank gene 4212752 4213108 . + . ID=gene-PUW38_20370;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=PUW38_20370 CP118116.1 Protein Homology CDS 4212752 4213108 . + 0 ID=cds-WJG80935.1;Parent=gene-PUW38_20370;Dbxref=NCBI_GP:WJG80935.1;Name=WJG80935.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=PUW38_20370;product=sulfurtransferase complex subunit TusC;protein_id=WJG80935.1;transl_table=11 CP118116.1 Genbank gene 4213116 4213403 . + . ID=gene-PUW38_20375;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=PUW38_20375 CP118116.1 Protein Homology CDS 4213116 4213403 . + 0 ID=cds-WJG80936.1;Parent=gene-PUW38_20375;Dbxref=NCBI_GP:WJG80936.1;Name=WJG80936.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=PUW38_20375;product=sulfurtransferase complex subunit TusB;protein_id=WJG80936.1;transl_table=11 CP118116.1 Genbank gene 4213529 4213903 . + . ID=gene-PUW38_20380;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=PUW38_20380 CP118116.1 Protein Homology CDS 4213529 4213903 . + 0 ID=cds-WJG80937.1;Parent=gene-PUW38_20380;Dbxref=NCBI_GP:WJG80937.1;Name=WJG80937.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=PUW38_20380;product=30S ribosomal protein S12;protein_id=WJG80937.1;transl_table=11 CP118116.1 Genbank gene 4213999 4214469 . + . ID=gene-PUW38_20385;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=PUW38_20385 CP118116.1 Protein Homology CDS 4213999 4214469 . + 0 ID=cds-WJG80938.1;Parent=gene-PUW38_20385;Dbxref=NCBI_GP:WJG80938.1;Name=WJG80938.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=PUW38_20385;product=30S ribosomal protein S7;protein_id=WJG80938.1;transl_table=11 CP118116.1 Genbank gene 4214566 4216680 . + . ID=gene-PUW38_20390;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=PUW38_20390 CP118116.1 Protein Homology CDS 4214566 4216680 . + 0 ID=cds-WJG80939.1;Parent=gene-PUW38_20390;Dbxref=NCBI_GP:WJG80939.1;Name=WJG80939.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=PUW38_20390;product=elongation factor G;protein_id=WJG80939.1;transl_table=11 CP118116.1 Genbank gene 4216752 4217936 . + . ID=gene-PUW38_20395;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PUW38_20395 CP118116.1 Protein Homology CDS 4216752 4217936 . + 0 ID=cds-WJG80940.1;Parent=gene-PUW38_20395;Dbxref=NCBI_GP:WJG80940.1;Name=WJG80940.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PUW38_20395;product=elongation factor Tu;protein_id=WJG80940.1;transl_table=11 CP118116.1 Genbank gene 4218121 4218315 . + . ID=gene-PUW38_20400;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=PUW38_20400 CP118116.1 Protein Homology CDS 4218121 4218315 . + 0 ID=cds-WJG80941.1;Parent=gene-PUW38_20400;Dbxref=NCBI_GP:WJG80941.1;Name=WJG80941.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=PUW38_20400;product=bacterioferritin-associated ferredoxin;protein_id=WJG80941.1;transl_table=11 CP118116.1 Genbank gene 4218387 4218863 . + . ID=gene-PUW38_20405;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=PUW38_20405 CP118116.1 Protein Homology CDS 4218387 4218863 . + 0 ID=cds-WJG80942.1;Parent=gene-PUW38_20405;Dbxref=NCBI_GP:WJG80942.1;Name=WJG80942.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=PUW38_20405;product=bacterioferritin;protein_id=WJG80942.1;transl_table=11 CP118116.1 Genbank gene 4218860 4219327 . - . ID=gene-PUW38_20410;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=PUW38_20410 CP118116.1 Protein Homology CDS 4218860 4219327 . - 0 ID=cds-WJG80943.1;Parent=gene-PUW38_20410;Dbxref=NCBI_GP:WJG80943.1;Name=WJG80943.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=PUW38_20410;product=leader peptidase HopD;protein_id=WJG80943.1;transl_table=11 CP118116.1 Genbank gene 4219707 4220018 . + . ID=gene-PUW38_20415;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=PUW38_20415 CP118116.1 Protein Homology CDS 4219707 4220018 . + 0 ID=cds-WJG80944.1;Parent=gene-PUW38_20415;Dbxref=NCBI_GP:WJG80944.1;Name=WJG80944.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=PUW38_20415;product=30S ribosomal protein S10;protein_id=WJG80944.1;transl_table=11 CP118116.1 Genbank gene 4220051 4220680 . + . ID=gene-PUW38_20420;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=PUW38_20420 CP118116.1 Protein Homology CDS 4220051 4220680 . + 0 ID=cds-WJG80945.1;Parent=gene-PUW38_20420;Dbxref=NCBI_GP:WJG80945.1;Name=WJG80945.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=PUW38_20420;product=50S ribosomal protein L3;protein_id=WJG80945.1;transl_table=11 CP118116.1 Genbank gene 4220691 4221296 . + . ID=gene-PUW38_20425;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=PUW38_20425 CP118116.1 Protein Homology CDS 4220691 4221296 . + 0 ID=cds-WJG80946.1;Parent=gene-PUW38_20425;Dbxref=NCBI_GP:WJG80946.1;Name=WJG80946.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=PUW38_20425;product=50S ribosomal protein L4;protein_id=WJG80946.1;transl_table=11 CP118116.1 Genbank gene 4221293 4221595 . + . ID=gene-PUW38_20430;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=PUW38_20430 CP118116.1 Protein Homology CDS 4221293 4221595 . + 0 ID=cds-WJG80947.1;Parent=gene-PUW38_20430;Dbxref=NCBI_GP:WJG80947.1;Name=WJG80947.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=PUW38_20430;product=50S ribosomal protein L23;protein_id=WJG80947.1;transl_table=11 CP118116.1 Genbank gene 4221613 4222434 . + . ID=gene-PUW38_20435;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=PUW38_20435 CP118116.1 Protein Homology CDS 4221613 4222434 . + 0 ID=cds-WJG80948.1;Parent=gene-PUW38_20435;Dbxref=NCBI_GP:WJG80948.1;Name=WJG80948.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=PUW38_20435;product=50S ribosomal protein L2;protein_id=WJG80948.1;transl_table=11 CP118116.1 Genbank gene 4222451 4222729 . + . ID=gene-PUW38_20440;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=PUW38_20440 CP118116.1 Protein Homology CDS 4222451 4222729 . + 0 ID=cds-WJG80949.1;Parent=gene-PUW38_20440;Dbxref=NCBI_GP:WJG80949.1;Name=WJG80949.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=PUW38_20440;product=30S ribosomal protein S19;protein_id=WJG80949.1;transl_table=11 CP118116.1 Genbank pseudogene 4222744 4223074 . + . ID=gene-PUW38_20445;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=pseudogene;locus_tag=PUW38_20445;pseudo=true CP118116.1 Protein Homology CDS 4222744 4223074 . + 0 ID=cds-PUW38_20445;Parent=gene-PUW38_20445;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=PUW38_20445;product=50S ribosomal protein L22;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4223092 4223793 . + . ID=gene-PUW38_20450;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=PUW38_20450 CP118116.1 Protein Homology CDS 4223092 4223793 . + 0 ID=cds-WJG80950.1;Parent=gene-PUW38_20450;Dbxref=NCBI_GP:WJG80950.1;Name=WJG80950.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=PUW38_20450;product=30S ribosomal protein S3;protein_id=WJG80950.1;transl_table=11 CP118116.1 Genbank gene 4223806 4224216 . + . ID=gene-PUW38_20455;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=PUW38_20455 CP118116.1 Protein Homology CDS 4223806 4224216 . + 0 ID=cds-WJG80951.1;Parent=gene-PUW38_20455;Dbxref=NCBI_GP:WJG80951.1;Name=WJG80951.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=PUW38_20455;product=50S ribosomal protein L16;protein_id=WJG80951.1;transl_table=11 CP118116.1 Genbank gene 4224216 4224407 . + . ID=gene-PUW38_20460;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=PUW38_20460 CP118116.1 Protein Homology CDS 4224216 4224407 . + 0 ID=cds-WJG80952.1;Parent=gene-PUW38_20460;Dbxref=NCBI_GP:WJG80952.1;Name=WJG80952.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=PUW38_20460;product=50S ribosomal protein L29;protein_id=WJG80952.1;transl_table=11 CP118116.1 Genbank gene 4224407 4224661 . + . ID=gene-PUW38_20465;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=PUW38_20465 CP118116.1 Protein Homology CDS 4224407 4224661 . + 0 ID=cds-WJG80953.1;Parent=gene-PUW38_20465;Dbxref=NCBI_GP:WJG80953.1;Name=WJG80953.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=PUW38_20465;product=30S ribosomal protein S17;protein_id=WJG80953.1;transl_table=11 CP118116.1 Genbank gene 4224824 4225195 . + . ID=gene-PUW38_20470;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=PUW38_20470 CP118116.1 Protein Homology CDS 4224824 4225195 . + 0 ID=cds-WJG80954.1;Parent=gene-PUW38_20470;Dbxref=NCBI_GP:WJG80954.1;Name=WJG80954.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=PUW38_20470;product=50S ribosomal protein L14;protein_id=WJG80954.1;transl_table=11 CP118116.1 Genbank gene 4225206 4225520 . + . ID=gene-PUW38_20475;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=PUW38_20475 CP118116.1 Protein Homology CDS 4225206 4225520 . + 0 ID=cds-WJG80955.1;Parent=gene-PUW38_20475;Dbxref=NCBI_GP:WJG80955.1;Name=WJG80955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=PUW38_20475;product=50S ribosomal protein L24;protein_id=WJG80955.1;transl_table=11 CP118116.1 Genbank gene 4225535 4226074 . + . ID=gene-PUW38_20480;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=PUW38_20480 CP118116.1 Protein Homology CDS 4225535 4226074 . + 0 ID=cds-WJG80956.1;Parent=gene-PUW38_20480;Dbxref=NCBI_GP:WJG80956.1;Name=WJG80956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=PUW38_20480;product=50S ribosomal protein L5;protein_id=WJG80956.1;transl_table=11 CP118116.1 Genbank gene 4226089 4226394 . + . ID=gene-PUW38_20485;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=PUW38_20485 CP118116.1 Protein Homology CDS 4226089 4226394 . + 0 ID=cds-WJG80957.1;Parent=gene-PUW38_20485;Dbxref=NCBI_GP:WJG80957.1;Name=WJG80957.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=PUW38_20485;product=30S ribosomal protein S14;protein_id=WJG80957.1;transl_table=11 CP118116.1 Genbank gene 4226428 4226820 . + . ID=gene-PUW38_20490;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=PUW38_20490 CP118116.1 Protein Homology CDS 4226428 4226820 . + 0 ID=cds-WJG80958.1;Parent=gene-PUW38_20490;Dbxref=NCBI_GP:WJG80958.1;Name=WJG80958.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=PUW38_20490;product=30S ribosomal protein S8;protein_id=WJG80958.1;transl_table=11 CP118116.1 Genbank gene 4226833 4227366 . + . ID=gene-PUW38_20495;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=PUW38_20495 CP118116.1 Protein Homology CDS 4226833 4227366 . + 0 ID=cds-WJG80959.1;Parent=gene-PUW38_20495;Dbxref=NCBI_GP:WJG80959.1;Name=WJG80959.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=PUW38_20495;product=50S ribosomal protein L6;protein_id=WJG80959.1;transl_table=11 CP118116.1 Genbank gene 4227376 4227729 . + . ID=gene-PUW38_20500;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=PUW38_20500 CP118116.1 Protein Homology CDS 4227376 4227729 . + 0 ID=cds-WJG80960.1;Parent=gene-PUW38_20500;Dbxref=NCBI_GP:WJG80960.1;Name=WJG80960.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=PUW38_20500;product=50S ribosomal protein L18;protein_id=WJG80960.1;transl_table=11 CP118116.1 Genbank gene 4227744 4228247 . + . ID=gene-PUW38_20505;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=PUW38_20505 CP118116.1 Protein Homology CDS 4227744 4228247 . + 0 ID=cds-WJG80961.1;Parent=gene-PUW38_20505;Dbxref=NCBI_GP:WJG80961.1;Name=WJG80961.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=PUW38_20505;product=30S ribosomal protein S5;protein_id=WJG80961.1;transl_table=11 CP118116.1 Genbank gene 4228251 4228430 . + . ID=gene-PUW38_20510;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=PUW38_20510 CP118116.1 Protein Homology CDS 4228251 4228430 . + 0 ID=cds-WJG80962.1;Parent=gene-PUW38_20510;Dbxref=NCBI_GP:WJG80962.1;Name=WJG80962.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=PUW38_20510;product=50S ribosomal protein L30;protein_id=WJG80962.1;transl_table=11 CP118116.1 Genbank gene 4228434 4228868 . + . ID=gene-PUW38_20515;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=PUW38_20515 CP118116.1 Protein Homology CDS 4228434 4228868 . + 0 ID=cds-WJG80963.1;Parent=gene-PUW38_20515;Dbxref=NCBI_GP:WJG80963.1;Name=WJG80963.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=PUW38_20515;product=50S ribosomal protein L15;protein_id=WJG80963.1;transl_table=11 CP118116.1 Genbank gene 4228876 4230207 . + . ID=gene-PUW38_20520;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=PUW38_20520 CP118116.1 Protein Homology CDS 4228876 4230207 . + 0 ID=cds-WJG80964.1;Parent=gene-PUW38_20520;Dbxref=NCBI_GP:WJG80964.1;Name=WJG80964.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=PUW38_20520;product=preprotein translocase subunit SecY;protein_id=WJG80964.1;transl_table=11 CP118116.1 Genbank gene 4230239 4230355 . + . ID=gene-PUW38_20525;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=PUW38_20525 CP118116.1 Protein Homology CDS 4230239 4230355 . + 0 ID=cds-WJG80965.1;Parent=gene-PUW38_20525;Dbxref=NCBI_GP:WJG80965.1;Name=WJG80965.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=PUW38_20525;product=50S ribosomal protein L36;protein_id=WJG80965.1;transl_table=11 CP118116.1 Genbank gene 4230502 4230858 . + . ID=gene-PUW38_20530;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=PUW38_20530 CP118116.1 Protein Homology CDS 4230502 4230858 . + 0 ID=cds-WJG80966.1;Parent=gene-PUW38_20530;Dbxref=NCBI_GP:WJG80966.1;Name=WJG80966.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=PUW38_20530;product=30S ribosomal protein S13;protein_id=WJG80966.1;transl_table=11 CP118116.1 Genbank gene 4230875 4231264 . + . ID=gene-PUW38_20535;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=PUW38_20535 CP118116.1 Protein Homology CDS 4230875 4231264 . + 0 ID=cds-WJG80967.1;Parent=gene-PUW38_20535;Dbxref=NCBI_GP:WJG80967.1;Name=WJG80967.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=PUW38_20535;product=30S ribosomal protein S11;protein_id=WJG80967.1;transl_table=11 CP118116.1 Genbank gene 4231298 4231918 . + . ID=gene-PUW38_20540;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=PUW38_20540 CP118116.1 Protein Homology CDS 4231298 4231918 . + 0 ID=cds-WJG80968.1;Parent=gene-PUW38_20540;Dbxref=NCBI_GP:WJG80968.1;Name=WJG80968.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=PUW38_20540;product=30S ribosomal protein S4;protein_id=WJG80968.1;transl_table=11 CP118116.1 Genbank gene 4231944 4232933 . + . ID=gene-PUW38_20545;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=PUW38_20545 CP118116.1 Protein Homology CDS 4231944 4232933 . + 0 ID=cds-WJG80969.1;Parent=gene-PUW38_20545;Dbxref=NCBI_GP:WJG80969.1;Name=WJG80969.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=PUW38_20545;product=DNA-directed RNA polymerase subunit alpha;protein_id=WJG80969.1;transl_table=11 CP118116.1 Genbank gene 4232974 4233357 . + . ID=gene-PUW38_20550;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=PUW38_20550 CP118116.1 Protein Homology CDS 4232974 4233357 . + 0 ID=cds-WJG80970.1;Parent=gene-PUW38_20550;Dbxref=NCBI_GP:WJG80970.1;Name=WJG80970.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=PUW38_20550;product=50S ribosomal protein L17;protein_id=WJG80970.1;transl_table=11 CP118116.1 Genbank gene 4233463 4233831 . + . ID=gene-PUW38_20555;Name=PUW38_20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20555 CP118116.1 Protein Homology CDS 4233463 4233831 . + 0 ID=cds-WJG80971.1;Parent=gene-PUW38_20555;Dbxref=NCBI_GP:WJG80971.1;Name=WJG80971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=PUW38_20555;product=DUF1992 domain-containing protein;protein_id=WJG80971.1;transl_table=11 CP118116.1 Genbank gene 4233842 4234267 . + . ID=gene-PUW38_20560;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=PUW38_20560 CP118116.1 Protein Homology CDS 4233842 4234267 . + 0 ID=cds-WJG80972.1;Parent=gene-PUW38_20560;Dbxref=NCBI_GP:WJG80972.1;Name=WJG80972.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=PUW38_20560;product=Zn(2+)-responsive transcriptional regulator;protein_id=WJG80972.1;transl_table=11 CP118116.1 Genbank gene 4234325 4234594 . + . ID=gene-PUW38_20565;Name=PUW38_20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20565 CP118116.1 Protein Homology CDS 4234325 4234594 . + 0 ID=cds-WJG80973.1;Parent=gene-PUW38_20565;Dbxref=NCBI_GP:WJG80973.1;Name=WJG80973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092708.1;locus_tag=PUW38_20565;product=alternative ribosome-rescue factor A;protein_id=WJG80973.1;transl_table=11 CP118116.1 Genbank gene 4234530 4234943 . - . ID=gene-PUW38_20570;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=PUW38_20570 CP118116.1 Protein Homology CDS 4234530 4234943 . - 0 ID=cds-WJG80974.1;Parent=gene-PUW38_20570;Dbxref=NCBI_GP:WJG80974.1;Name=WJG80974.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=PUW38_20570;product=large-conductance mechanosensitive channel protein MscL;protein_id=WJG80974.1;transl_table=11 CP118116.1 Genbank gene 4235085 4236461 . - . ID=gene-PUW38_20575;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=PUW38_20575 CP118116.1 Protein Homology CDS 4235085 4236461 . - 0 ID=cds-WJG80975.1;Parent=gene-PUW38_20575;Dbxref=NCBI_GP:WJG80975.1;Name=WJG80975.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=PUW38_20575;product=Trk system potassium transporter TrkA;protein_id=WJG80975.1;transl_table=11 CP118116.1 Genbank gene 4236483 4237772 . - . ID=gene-PUW38_20580;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=PUW38_20580 CP118116.1 Protein Homology CDS 4236483 4237772 . - 0 ID=cds-WJG80976.1;Parent=gene-PUW38_20580;Dbxref=NCBI_GP:WJG80976.1;Name=WJG80976.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=PUW38_20580;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WJG80976.1;transl_table=11 CP118116.1 Genbank gene 4237824 4238771 . - . ID=gene-PUW38_20585;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=PUW38_20585 CP118116.1 Protein Homology CDS 4237824 4238771 . - 0 ID=cds-WJG80977.1;Parent=gene-PUW38_20585;Dbxref=NCBI_GP:WJG80977.1;Name=WJG80977.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=PUW38_20585;product=methionyl-tRNA formyltransferase;protein_id=WJG80977.1;transl_table=11 CP118116.1 Genbank gene 4238787 4239296 . - . ID=gene-PUW38_20590;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=PUW38_20590 CP118116.1 Protein Homology CDS 4238787 4239296 . - 0 ID=cds-WJG80978.1;Parent=gene-PUW38_20590;Dbxref=NCBI_GP:WJG80978.1;Name=WJG80978.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=PUW38_20590;product=peptide deformylase;protein_id=WJG80978.1;transl_table=11 CP118116.1 Genbank pseudogene 4239428 4240551 . + . ID=gene-PUW38_20595;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=pseudogene;locus_tag=PUW38_20595;pseudo=true CP118116.1 Protein Homology CDS 4239428 4240551 . + 0 ID=cds-PUW38_20595;Parent=gene-PUW38_20595;Note=frameshifted;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=PUW38_20595;product=DNA-protecting protein DprA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4240523 4240996 . + . ID=gene-PUW38_20600;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=PUW38_20600 CP118116.1 Protein Homology CDS 4240523 4240996 . + 0 ID=cds-WJG80979.1;Parent=gene-PUW38_20600;Dbxref=NCBI_GP:WJG80979.1;Name=WJG80979.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=PUW38_20600;product=DUF494 family protein Smg;protein_id=WJG80979.1;transl_table=11 CP118116.1 Genbank gene 4241023 4241565 . + . ID=gene-PUW38_20605;Name=PUW38_20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20605 CP118116.1 Protein Homology CDS 4241023 4241565 . + 0 ID=cds-WJG80980.1;Parent=gene-PUW38_20605;Dbxref=NCBI_GP:WJG80980.1;Name=WJG80980.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=PUW38_20605;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WJG80980.1;transl_table=11 CP118116.1 Genbank gene 4241570 4242142 . + . ID=gene-PUW38_20610;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=PUW38_20610 CP118116.1 Protein Homology CDS 4241570 4242142 . + 0 ID=cds-WJG80981.1;Parent=gene-PUW38_20610;Dbxref=NCBI_GP:WJG80981.1;Name=WJG80981.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=PUW38_20610;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WJG80981.1;transl_table=11 CP118116.1 Genbank gene 4242147 4242965 . + . ID=gene-PUW38_20615;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=PUW38_20615 CP118116.1 Protein Homology CDS 4242147 4242965 . + 0 ID=cds-WJG83299.1;Parent=gene-PUW38_20615;Dbxref=NCBI_GP:WJG83299.1;Name=WJG83299.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=PUW38_20615;product=shikimate dehydrogenase;protein_id=WJG83299.1;transl_table=11 CP118116.1 Genbank gene 4242962 4243219 . + . ID=gene-PUW38_20620;Name=PUW38_20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20620 CP118116.1 Protein Homology CDS 4242962 4243219 . + 0 ID=cds-WJG80982.1;Parent=gene-PUW38_20620;Dbxref=NCBI_GP:WJG80982.1;Name=WJG80982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=PUW38_20620;product=DUF1488 domain-containing protein;protein_id=WJG80982.1;transl_table=11 CP118116.1 Genbank gene 4243195 4243749 . - . ID=gene-PUW38_20625;Name=PUW38_20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20625 CP118116.1 Protein Homology CDS 4243195 4243749 . - 0 ID=cds-WJG80983.1;Parent=gene-PUW38_20625;Dbxref=NCBI_GP:WJG80983.1;Name=WJG80983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=PUW38_20625;product=gamma carbonic anhydrase family protein;protein_id=WJG80983.1;transl_table=11 CP118116.1 Genbank gene 4244220 4245761 . + . ID=gene-PUW38_20630;Name=PUW38_20630;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_20630 CP118116.1 cmsearch rRNA 4244220 4245761 . + . ID=rna-PUW38_20630;Parent=gene-PUW38_20630;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_20630;product=16S ribosomal RNA CP118116.1 cmsearch exon 4244220 4245761 . + . ID=exon-PUW38_20630-1;Parent=rna-PUW38_20630;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_20630;product=16S ribosomal RNA CP118116.1 Genbank gene 4245847 4245922 . + . ID=gene-PUW38_20635;Name=PUW38_20635;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_20635 CP118116.1 tRNAscan-SE tRNA 4245847 4245922 . + . ID=rna-PUW38_20635;Parent=gene-PUW38_20635;anticodon=(pos:4245881..4245883);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_20635;product=tRNA-Glu CP118116.1 tRNAscan-SE exon 4245847 4245922 . + . ID=exon-PUW38_20635-1;Parent=rna-PUW38_20635;anticodon=(pos:4245881..4245883);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_20635;product=tRNA-Glu CP118116.1 Genbank gene 4246116 4249103 . + . ID=gene-PUW38_20640;Name=PUW38_20640;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW38_20640 CP118116.1 cmsearch rRNA 4246116 4249103 . + . ID=rna-PUW38_20640;Parent=gene-PUW38_20640;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_20640;product=23S ribosomal RNA CP118116.1 cmsearch exon 4246116 4249103 . + . ID=exon-PUW38_20640-1;Parent=rna-PUW38_20640;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_20640;product=23S ribosomal RNA CP118116.1 Genbank gene 4249300 4249415 . + . ID=gene-PUW38_20645;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW38_20645 CP118116.1 cmsearch rRNA 4249300 4249415 . + . ID=rna-PUW38_20645;Parent=gene-PUW38_20645;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_20645;product=5S ribosomal RNA CP118116.1 cmsearch exon 4249300 4249415 . + . ID=exon-PUW38_20645-1;Parent=rna-PUW38_20645;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW38_20645;product=5S ribosomal RNA CP118116.1 Genbank gene 4249581 4250018 . - . ID=gene-PUW38_20650;Name=PUW38_20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20650 CP118116.1 Protein Homology CDS 4249581 4250018 . - 0 ID=cds-WJG80984.1;Parent=gene-PUW38_20650;Dbxref=NCBI_GP:WJG80984.1;Name=WJG80984.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=PUW38_20650;product=acetyltransferase;protein_id=WJG80984.1;transl_table=11 CP118116.1 Genbank gene 4250175 4251104 . + . ID=gene-PUW38_20655;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=PUW38_20655 CP118116.1 Protein Homology CDS 4250175 4251104 . + 0 ID=cds-WJG80985.1;Parent=gene-PUW38_20655;Dbxref=NCBI_GP:WJG80985.1;Name=WJG80985.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=PUW38_20655;product=homoserine O-succinyltransferase;protein_id=WJG80985.1;transl_table=11 CP118116.1 Genbank gene 4251373 4252974 . + . ID=gene-PUW38_20660;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=PUW38_20660 CP118116.1 Protein Homology CDS 4251373 4252974 . + 0 ID=cds-WJG83300.1;Parent=gene-PUW38_20660;Dbxref=NCBI_GP:WJG83300.1;Name=WJG83300.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=PUW38_20660;product=malate synthase A;protein_id=WJG83300.1;transl_table=11 CP118116.1 Genbank gene 4253006 4254310 . + . ID=gene-PUW38_20665;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=PUW38_20665 CP118116.1 Protein Homology CDS 4253006 4254310 . + 0 ID=cds-WJG80986.1;Parent=gene-PUW38_20665;Dbxref=NCBI_GP:WJG80986.1;Name=WJG80986.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=PUW38_20665;product=isocitrate lyase;protein_id=WJG80986.1;transl_table=11 CP118116.1 Genbank gene 4254412 4256163 . + . ID=gene-PUW38_20670;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=PUW38_20670 CP118116.1 Protein Homology CDS 4254412 4256163 . + 0 ID=cds-WJG80987.1;Parent=gene-PUW38_20670;Dbxref=NCBI_GP:WJG80987.1;Name=WJG80987.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=PUW38_20670;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WJG80987.1;transl_table=11 CP118116.1 Genbank gene 4256127 4256534 . - . ID=gene-PUW38_20675;Name=PUW38_20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20675 CP118116.1 Protein Homology CDS 4256127 4256534 . - 0 ID=cds-WJG83301.1;Parent=gene-PUW38_20675;Dbxref=NCBI_GP:WJG83301.1;Name=WJG83301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=PUW38_20675;product=ASCH domain-containing protein;protein_id=WJG83301.1;transl_table=11 CP118116.1 Genbank gene 4256545 4257369 . - . ID=gene-PUW38_20680;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=PUW38_20680 CP118116.1 Protein Homology CDS 4256545 4257369 . - 0 ID=cds-WJG80988.1;Parent=gene-PUW38_20680;Dbxref=NCBI_GP:WJG80988.1;Name=WJG80988.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=PUW38_20680;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WJG80988.1;transl_table=11 CP118116.1 Genbank pseudogene 4257748 4261354 . + . ID=gene-PUW38_20685;Name=metH;gbkey=Gene;gene=metH;gene_biotype=pseudogene;locus_tag=PUW38_20685;pseudo=true CP118116.1 Protein Homology CDS 4257748 4261354 . + 0 ID=cds-PUW38_20685;Parent=gene-PUW38_20685;Note=frameshifted;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: protein motif:HMM:NF013007.2%2CHMM:NF014961.2;locus_tag=PUW38_20685;product=methionine synthase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4261621 4263252 . + . ID=gene-PUW38_20690;Name=PUW38_20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20690 CP118116.1 Protein Homology CDS 4261621 4263252 . + 0 ID=cds-WJG80989.1;Parent=gene-PUW38_20690;Dbxref=NCBI_GP:WJG80989.1;Name=WJG80989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=PUW38_20690;product=Na/Pi cotransporter family protein;protein_id=WJG80989.1;transl_table=11 CP118116.1 Genbank gene 4263312 4264016 . - . ID=gene-PUW38_20695;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=PUW38_20695 CP118116.1 Protein Homology CDS 4263312 4264016 . - 0 ID=cds-WJG80990.1;Parent=gene-PUW38_20695;Dbxref=NCBI_GP:WJG80990.1;Name=WJG80990.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421779.1;locus_tag=PUW38_20695;product=dipeptidase PepE;protein_id=WJG80990.1;transl_table=11 CP118116.1 Genbank gene 4264088 4264189 . + . ID=gene-PUW38_20700;Name=PUW38_20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20700 CP118116.1 Protein Homology CDS 4264088 4264189 . + 0 ID=cds-WJG80991.1;Parent=gene-PUW38_20700;Dbxref=NCBI_GP:WJG80991.1;Name=WJG80991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=PUW38_20700;product=hypothetical protein;protein_id=WJG80991.1;transl_table=11 CP118116.1 Genbank gene 4264224 4264763 . + . ID=gene-PUW38_20705;Name=PUW38_20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20705 CP118116.1 Protein Homology CDS 4264224 4264763 . + 0 ID=cds-WJG80992.1;Parent=gene-PUW38_20705;Dbxref=NCBI_GP:WJG80992.1;Name=WJG80992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=PUW38_20705;product=DUF2058 domain-containing protein;protein_id=WJG80992.1;transl_table=11 CP118116.1 Genbank gene 4264810 4265679 . + . ID=gene-PUW38_20710;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=PUW38_20710 CP118116.1 Protein Homology CDS 4264810 4265679 . + 0 ID=cds-WJG80993.1;Parent=gene-PUW38_20710;Dbxref=NCBI_GP:WJG80993.1;Name=WJG80993.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=PUW38_20710;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WJG80993.1;transl_table=11 CP118116.1 Genbank gene 4265676 4265948 . - . ID=gene-PUW38_20715;Name=PUW38_20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20715 CP118116.1 Protein Homology CDS 4265676 4265948 . - 0 ID=cds-WJG80994.1;Parent=gene-PUW38_20715;Dbxref=NCBI_GP:WJG80994.1;Name=WJG80994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=PUW38_20715;product=DUF3811 domain-containing protein;protein_id=WJG80994.1;transl_table=11 CP118116.1 Genbank gene 4266011 4266769 . - . ID=gene-PUW38_20720;Name=PUW38_20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20720 CP118116.1 Protein Homology CDS 4266011 4266769 . - 0 ID=cds-WJG80995.1;Parent=gene-PUW38_20720;Dbxref=NCBI_GP:WJG80995.1;Name=WJG80995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=PUW38_20720;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG80995.1;transl_table=11 CP118116.1 Genbank pseudogene 4266756 4267619 . - . ID=gene-PUW38_20725;Name=PUW38_20725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_20725;pseudo=true CP118116.1 Protein Homology CDS 4266756 4267619 . - 0 ID=cds-PUW38_20725;Parent=gene-PUW38_20725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=PUW38_20725;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4267636 4268475 . - . ID=gene-PUW38_20730;Name=PUW38_20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20730 CP118116.1 Protein Homology CDS 4267636 4268475 . - 0 ID=cds-WJG80996.1;Parent=gene-PUW38_20730;Dbxref=NCBI_GP:WJG80996.1;Name=WJG80996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=PUW38_20730;product=histidine biosynthesis protein;protein_id=WJG80996.1;transl_table=11 CP118116.1 Genbank pseudogene 4268499 4269955 . - . ID=gene-PUW38_20735;Name=PUW38_20735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_20735;pseudo=true CP118116.1 Protein Homology CDS 4268499 4269955 . - 0 ID=cds-PUW38_20735;Parent=gene-PUW38_20735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=PUW38_20735;product=PTS sugar transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4270384 4271112 . - . ID=gene-PUW38_20740;Name=PUW38_20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20740 CP118116.1 Protein Homology CDS 4270384 4271112 . - 0 ID=cds-WJG80997.1;Parent=gene-PUW38_20740;Dbxref=NCBI_GP:WJG80997.1;Name=WJG80997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=PUW38_20740;product=hypothetical protein;protein_id=WJG80997.1;transl_table=11 CP118116.1 Genbank gene 4271691 4271978 . - . ID=gene-PUW38_20745;Name=PUW38_20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20745 CP118116.1 Protein Homology CDS 4271691 4271978 . - 0 ID=cds-WJG83302.1;Parent=gene-PUW38_20745;Dbxref=NCBI_GP:WJG83302.1;Name=WJG83302.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.2;locus_tag=PUW38_20745;product=DapH/DapD/GlmU-related protein;protein_id=WJG83302.1;transl_table=11 CP118116.1 Genbank pseudogene 4272009 4272234 . - . ID=gene-PUW38_20750;Name=PUW38_20750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_20750;pseudo=true CP118116.1 Protein Homology CDS 4272009 4272234 . - 0 ID=cds-PUW38_20750;Parent=gene-PUW38_20750;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=PUW38_20750;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4272557 4272904 . + . ID=gene-PUW38_20755;Name=PUW38_20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20755 CP118116.1 Protein Homology CDS 4272557 4272904 . + 0 ID=cds-WJG80998.1;Parent=gene-PUW38_20755;Dbxref=NCBI_GP:WJG80998.1;Name=WJG80998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=PUW38_20755;product=Mor transcription activator family protein;protein_id=WJG80998.1;transl_table=11 CP118116.1 Genbank gene 4273035 4274384 . - . ID=gene-PUW38_20760;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=PUW38_20760 CP118116.1 Protein Homology CDS 4273035 4274384 . - 0 ID=cds-WJG80999.1;Parent=gene-PUW38_20760;Dbxref=NCBI_GP:WJG80999.1;Name=WJG80999.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=PUW38_20760;product=lysine-sensitive aspartokinase 3;protein_id=WJG80999.1;transl_table=11 CP118116.1 Genbank gene 4274772 4276421 . + . ID=gene-PUW38_20765;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=PUW38_20765 CP118116.1 Protein Homology CDS 4274772 4276421 . + 0 ID=cds-WJG81000.1;Parent=gene-PUW38_20765;Dbxref=NCBI_GP:WJG81000.1;Name=WJG81000.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=PUW38_20765;product=glucose-6-phosphate isomerase;protein_id=WJG81000.1;transl_table=11 CP118116.1 Genbank gene 4276864 4277106 . + . ID=gene-PUW38_20770;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=PUW38_20770 CP118116.1 Protein Homology CDS 4276864 4277106 . + 0 ID=cds-WJG83303.1;Parent=gene-PUW38_20770;Dbxref=NCBI_GP:WJG83303.1;Name=WJG83303.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=PUW38_20770;product=exopolysaccharide production protein YjbE;protein_id=WJG83303.1;transl_table=11 CP118116.1 Genbank gene 4277170 4277808 . + . ID=gene-PUW38_20775;Name=PUW38_20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20775 CP118116.1 Protein Homology CDS 4277170 4277808 . + 0 ID=cds-WJG81001.1;Parent=gene-PUW38_20775;Dbxref=NCBI_GP:WJG81001.1;Name=WJG81001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=PUW38_20775;product=YjbF family lipoprotein;protein_id=WJG81001.1;transl_table=11 CP118116.1 Genbank gene 4277805 4278542 . + . ID=gene-PUW38_20780;Name=PUW38_20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20780 CP118116.1 Protein Homology CDS 4277805 4278542 . + 0 ID=cds-WJG81002.1;Parent=gene-PUW38_20780;Dbxref=NCBI_GP:WJG81002.1;Name=WJG81002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=PUW38_20780;product=capsule biosynthesis GfcC family protein;protein_id=WJG81002.1;transl_table=11 CP118116.1 Genbank gene 4278542 4280638 . + . ID=gene-PUW38_20785;Name=PUW38_20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20785 CP118116.1 Protein Homology CDS 4278542 4280638 . + 0 ID=cds-WJG81003.1;Parent=gene-PUW38_20785;Dbxref=NCBI_GP:WJG81003.1;Name=WJG81003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=PUW38_20785;product=YjbH domain-containing protein;protein_id=WJG81003.1;transl_table=11 CP118116.1 Genbank gene 4280781 4281191 . + . ID=gene-PUW38_20790;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=PUW38_20790 CP118116.1 Protein Homology CDS 4280781 4281191 . + 0 ID=cds-WJG81004.1;Parent=gene-PUW38_20790;Dbxref=NCBI_GP:WJG81004.1;Name=WJG81004.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=PUW38_20790;product=phosphate-starvation-inducible protein PsiE;protein_id=WJG81004.1;transl_table=11 CP118116.1 Genbank gene 4281357 4282247 . - . ID=gene-PUW38_20795;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=PUW38_20795 CP118116.1 Protein Homology CDS 4281357 4282247 . - 0 ID=cds-WJG81005.1;Parent=gene-PUW38_20795;Dbxref=NCBI_GP:WJG81005.1;Name=WJG81005.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=PUW38_20795;product=maltose ABC transporter permease MalG;protein_id=WJG81005.1;transl_table=11 CP118116.1 Genbank gene 4282262 4283806 . - . ID=gene-PUW38_20800;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=PUW38_20800 CP118116.1 Protein Homology CDS 4282262 4283806 . - 0 ID=cds-WJG81006.1;Parent=gene-PUW38_20800;Dbxref=NCBI_GP:WJG81006.1;Name=WJG81006.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=PUW38_20800;product=maltose ABC transporter permease MalF;protein_id=WJG81006.1;transl_table=11 CP118116.1 Genbank gene 4283938 4285128 . - . ID=gene-PUW38_20805;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=PUW38_20805 CP118116.1 Protein Homology CDS 4283938 4285128 . - 0 ID=cds-WJG81007.1;Parent=gene-PUW38_20805;Dbxref=NCBI_GP:WJG81007.1;Name=WJG81007.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=PUW38_20805;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WJG81007.1;transl_table=11 CP118116.1 Genbank gene 4285489 4286598 . + . ID=gene-PUW38_20810;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=PUW38_20810 CP118116.1 Protein Homology CDS 4285489 4286598 . + 0 ID=cds-WJG81008.1;Parent=gene-PUW38_20810;Dbxref=NCBI_GP:WJG81008.1;Name=WJG81008.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=PUW38_20810;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WJG81008.1;transl_table=11 CP118116.1 Genbank gene 4286687 4288045 . + . ID=gene-PUW38_20815;Name=PUW38_20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20815 CP118116.1 Protein Homology CDS 4286687 4288045 . + 0 ID=cds-WJG81009.1;Parent=gene-PUW38_20815;Dbxref=NCBI_GP:WJG81009.1;Name=WJG81009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=PUW38_20815;product=maltoporin;protein_id=WJG81009.1;transl_table=11 CP118116.1 Genbank gene 4288209 4289126 . + . ID=gene-PUW38_20820;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=PUW38_20820 CP118116.1 Protein Homology CDS 4288209 4289126 . + 0 ID=cds-WJG81010.1;Parent=gene-PUW38_20820;Dbxref=NCBI_GP:WJG81010.1;Name=WJG81010.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=PUW38_20820;product=maltose operon protein MalM;protein_id=WJG81010.1;transl_table=11 CP118116.1 Genbank gene 4289307 4289804 . + . ID=gene-PUW38_20825;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=PUW38_20825 CP118116.1 Protein Homology CDS 4289307 4289804 . + 0 ID=cds-WJG81011.1;Parent=gene-PUW38_20825;Dbxref=NCBI_GP:WJG81011.1;Name=WJG81011.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=PUW38_20825;product=chorismate lyase;protein_id=WJG81011.1;transl_table=11 CP118116.1 Genbank gene 4289818 4290690 . + . ID=gene-PUW38_20830;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=PUW38_20830 CP118116.1 Protein Homology CDS 4289818 4290690 . + 0 ID=cds-WJG81012.1;Parent=gene-PUW38_20830;Dbxref=NCBI_GP:WJG81012.1;Name=WJG81012.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=PUW38_20830;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WJG81012.1;transl_table=11 CP118116.1 Genbank gene 4290789 4293209 . - . ID=gene-PUW38_20835;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=PUW38_20835 CP118116.1 Protein Homology CDS 4290789 4293209 . - 0 ID=cds-WJG81013.1;Parent=gene-PUW38_20835;Dbxref=NCBI_GP:WJG81013.1;Name=WJG81013.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=PUW38_20835;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WJG81013.1;transl_table=11 CP118116.1 Genbank gene 4293380 4293748 . + . ID=gene-PUW38_20840;Name=PUW38_20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20840 CP118116.1 Protein Homology CDS 4293380 4293748 . + 0 ID=cds-WJG81014.1;Parent=gene-PUW38_20840;Dbxref=NCBI_GP:WJG81014.1;Name=WJG81014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=PUW38_20840;product=diacylglycerol kinase;protein_id=WJG81014.1;transl_table=11 CP118116.1 Genbank gene 4293856 4294464 . + . ID=gene-PUW38_20845;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=PUW38_20845 CP118116.1 Protein Homology CDS 4293856 4294464 . + 0 ID=cds-WJG81015.1;Parent=gene-PUW38_20845;Dbxref=NCBI_GP:WJG81015.1;Name=WJG81015.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=PUW38_20845;product=transcriptional repressor LexA;protein_id=WJG81015.1;transl_table=11 CP118116.1 Genbank pseudogene 4294643 4295967 . + . ID=gene-PUW38_20850;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=pseudogene;locus_tag=PUW38_20850;pseudo=true CP118116.1 Protein Homology CDS 4294643 4295967 . + 0 ID=cds-PUW38_20850;Parent=gene-PUW38_20850;Note=frameshifted;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=PUW38_20850;product=MATE family efflux transporter DinF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4295964 4296077 . + . ID=gene-PUW38_20855;Name=PUW38_20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20855 CP118116.1 Protein Homology CDS 4295964 4296077 . + 0 ID=cds-WJG81016.1;Parent=gene-PUW38_20855;Dbxref=NCBI_GP:WJG81016.1;Name=WJG81016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=PUW38_20855;product=hypothetical protein;protein_id=WJG81016.1;transl_table=11 CP118116.1 Genbank gene 4296099 4296308 . + . ID=gene-PUW38_20860;Name=PUW38_20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20860 CP118116.1 Protein Homology CDS 4296099 4296308 . + 0 ID=cds-WJG83304.1;Parent=gene-PUW38_20860;Dbxref=NCBI_GP:WJG83304.1;Name=WJG83304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=PUW38_20860;product=CsbD family protein;protein_id=WJG83304.1;transl_table=11 CP118116.1 Genbank gene 4296407 4296922 . - . ID=gene-PUW38_20865;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=PUW38_20865 CP118116.1 Protein Homology CDS 4296407 4296922 . - 0 ID=cds-WJG81017.1;Parent=gene-PUW38_20865;Dbxref=NCBI_GP:WJG81017.1;Name=WJG81017.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=PUW38_20865;product=zinc uptake transcriptional repressor Zur;protein_id=WJG81017.1;transl_table=11 CP118116.1 Genbank pseudogene 4297169 4298478 . + . ID=gene-PUW38_20870;Name=PUW38_20870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_20870;pseudo=true CP118116.1 Protein Homology CDS 4297169 4298478 . + 0 ID=cds-PUW38_20870;Parent=gene-PUW38_20870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=PUW38_20870;product=conjugal transfer protein TraF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4298566 4299564 . + . ID=gene-PUW38_20875;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=PUW38_20875 CP118116.1 Protein Homology CDS 4298566 4299564 . + 0 ID=cds-WJG81018.1;Parent=gene-PUW38_20875;Dbxref=NCBI_GP:WJG81018.1;Name=WJG81018.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=PUW38_20875;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WJG81018.1;transl_table=11 CP118116.1 Genbank gene 4299732 4299974 . + . ID=gene-PUW38_20880;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=PUW38_20880 CP118116.1 Protein Homology CDS 4299732 4299974 . + 0 ID=cds-WJG81019.1;Parent=gene-PUW38_20880;Dbxref=NCBI_GP:WJG81019.1;Name=WJG81019.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=PUW38_20880;product=envelope stress response protein PspG;protein_id=WJG81019.1;transl_table=11 CP118116.1 Genbank gene 4300149 4301132 . - . ID=gene-PUW38_20885;Name=PUW38_20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20885 CP118116.1 Protein Homology CDS 4300149 4301132 . - 0 ID=cds-WJG81020.1;Parent=gene-PUW38_20885;Dbxref=NCBI_GP:WJG81020.1;Name=WJG81020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=PUW38_20885;product=quinone oxidoreductase;protein_id=WJG81020.1;transl_table=11 CP118116.1 Genbank gene 4301197 4302612 . + . ID=gene-PUW38_20890;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=PUW38_20890 CP118116.1 Protein Homology CDS 4301197 4302612 . + 0 ID=cds-WJG81021.1;Parent=gene-PUW38_20890;Dbxref=NCBI_GP:WJG81021.1;Name=WJG81021.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=PUW38_20890;product=replicative DNA helicase;protein_id=WJG81021.1;transl_table=11 CP118116.1 Genbank gene 4302644 4303723 . + . ID=gene-PUW38_20895;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=PUW38_20895 CP118116.1 Protein Homology CDS 4302644 4303723 . + 0 ID=cds-WJG81022.1;Parent=gene-PUW38_20895;Dbxref=NCBI_GP:WJG81022.1;Name=WJG81022.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=PUW38_20895;product=alanine racemase;protein_id=WJG81022.1;transl_table=11 CP118116.1 Genbank gene 4303909 4305102 . + . ID=gene-PUW38_20900;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=PUW38_20900 CP118116.1 Protein Homology CDS 4303909 4305102 . + 0 ID=cds-WJG81023.1;Parent=gene-PUW38_20900;Dbxref=NCBI_GP:WJG81023.1;Name=WJG81023.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=PUW38_20900;product=aromatic amino acid transaminase;protein_id=WJG81023.1;transl_table=11 CP118116.1 Genbank gene 4305289 4306002 . + . ID=gene-PUW38_20905;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=PUW38_20905 CP118116.1 Protein Homology CDS 4305289 4306002 . + 0 ID=cds-WJG81024.1;Parent=gene-PUW38_20905;Dbxref=NCBI_GP:WJG81024.1;Name=WJG81024.1;Ontology_term=GO:0003993;gbkey=CDS;gene=aphA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=PUW38_20905;product=acid phosphatase AphA;protein_id=WJG81024.1;transl_table=11 CP118116.1 Genbank gene 4306131 4306547 . + . ID=gene-PUW38_20910;Name=PUW38_20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20910 CP118116.1 Protein Homology CDS 4306131 4306547 . + 0 ID=cds-WJG81025.1;Parent=gene-PUW38_20910;Dbxref=NCBI_GP:WJG81025.1;Name=WJG81025.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=PUW38_20910;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WJG81025.1;transl_table=11 CP118116.1 Genbank gene 4306550 4306906 . + . ID=gene-PUW38_20915;Name=PUW38_20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20915 CP118116.1 Protein Homology CDS 4306550 4306906 . + 0 ID=cds-WJG81026.1;Parent=gene-PUW38_20915;Dbxref=NCBI_GP:WJG81026.1;Name=WJG81026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=PUW38_20915;product=MmcQ/YjbR family DNA-binding protein;protein_id=WJG81026.1;transl_table=11 CP118116.1 Genbank gene 4306907 4307245 . - . ID=gene-PUW38_20920;Name=PUW38_20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20920 CP118116.1 Protein Homology CDS 4306907 4307245 . - 0 ID=cds-WJG81027.1;Parent=gene-PUW38_20920;Dbxref=NCBI_GP:WJG81027.1;Name=WJG81027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=PUW38_20920;product=hypothetical protein;protein_id=WJG81027.1;transl_table=11 CP118116.1 Genbank gene 4307232 4307687 . - . ID=gene-PUW38_20925;Name=PUW38_20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20925 CP118116.1 Protein Homology CDS 4307232 4307687 . - 0 ID=cds-WJG81028.1;Parent=gene-PUW38_20925;Dbxref=NCBI_GP:WJG81028.1;Name=WJG81028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=PUW38_20925;product=hypothetical protein;protein_id=WJG81028.1;transl_table=11 CP118116.1 Genbank pseudogene 4307819 4310643 . - . ID=gene-PUW38_20930;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=pseudogene;locus_tag=PUW38_20930;pseudo=true CP118116.1 Protein Homology CDS 4307819 4310643 . - 0 ID=cds-PUW38_20930;Parent=gene-PUW38_20930;Note=frameshifted;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=PUW38_20930;product=excinuclease ABC subunit UvrA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4310891 4311421 . + . ID=gene-PUW38_20935;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=PUW38_20935 CP118116.1 Protein Homology CDS 4310891 4311421 . + 0 ID=cds-WJG81029.1;Parent=gene-PUW38_20935;Dbxref=NCBI_GP:WJG81029.1;Name=WJG81029.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=PUW38_20935;product=single-stranded DNA-binding protein SSB1;protein_id=WJG81029.1;transl_table=11 CP118116.1 Genbank gene 4312462 4313094 . + . ID=gene-PUW38_20940;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=PUW38_20940 CP118116.1 Protein Homology CDS 4312462 4313094 . + 0 ID=cds-WJG81030.1;Parent=gene-PUW38_20940;Dbxref=NCBI_GP:WJG81030.1;Name=WJG81030.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=PUW38_20940;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WJG81030.1;transl_table=11 CP118116.1 Genbank gene 4313091 4314479 . + . ID=gene-PUW38_20945;Name=PUW38_20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20945 CP118116.1 Protein Homology CDS 4313091 4314479 . + 0 ID=cds-WJG81031.1;Parent=gene-PUW38_20945;Dbxref=NCBI_GP:WJG81031.1;Name=WJG81031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=PUW38_20945;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WJG81031.1;transl_table=11 CP118116.1 Genbank gene 4314469 4315788 . + . ID=gene-PUW38_20950;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=PUW38_20950 CP118116.1 Protein Homology CDS 4314469 4315788 . + 0 ID=cds-WJG81032.1;Parent=gene-PUW38_20950;Dbxref=NCBI_GP:WJG81032.1;Name=WJG81032.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=PUW38_20950;product=SPI-4 type I secretion system protein SiiC;protein_id=WJG81032.1;transl_table=11 CP118116.1 Genbank gene 4315785 4317062 . + . ID=gene-PUW38_20955;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=PUW38_20955 CP118116.1 Protein Homology CDS 4315785 4317062 . + 0 ID=cds-WJG81033.1;Parent=gene-PUW38_20955;Dbxref=NCBI_GP:WJG81033.1;Name=WJG81033.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=PUW38_20955;product=SPI-4 type I secretion system protein SiiD;protein_id=WJG81033.1;transl_table=11 CP118116.1 Genbank gene 4317079 4333758 . + . ID=gene-PUW38_20960;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=PUW38_20960 CP118116.1 Protein Homology CDS 4317079 4333758 . + 0 ID=cds-WJG81034.1;Parent=gene-PUW38_20960;Dbxref=NCBI_GP:WJG81034.1;Name=WJG81034.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=PUW38_20960;product=non-fimbrial adhesin SiiE;protein_id=WJG81034.1;transl_table=11 CP118116.1 Genbank gene 4333798 4335864 . + . ID=gene-PUW38_20965;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=PUW38_20965 CP118116.1 Protein Homology CDS 4333798 4335864 . + 0 ID=cds-WJG81035.1;Parent=gene-PUW38_20965;Dbxref=NCBI_GP:WJG81035.1;Name=WJG81035.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=PUW38_20965;product=SPI-4 type I secretion system protein SiiF;protein_id=WJG81035.1;transl_table=11 CP118116.1 Genbank gene 4336142 4336423 . - . ID=gene-PUW38_20970;Name=PUW38_20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20970 CP118116.1 Protein Homology CDS 4336142 4336423 . - 0 ID=cds-WJG81036.1;Parent=gene-PUW38_20970;Dbxref=NCBI_GP:WJG81036.1;Name=WJG81036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=PUW38_20970;product=YjcB family protein;protein_id=WJG81036.1;transl_table=11 CP118116.1 Genbank pseudogene 4336985 4338579 . + . ID=gene-PUW38_20975;Name=PUW38_20975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_20975;pseudo=true CP118116.1 Protein Homology CDS 4336985 4338579 . + 0 ID=cds-PUW38_20975;Parent=gene-PUW38_20975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=PUW38_20975;product=EAL domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4338567 4338890 . - . ID=gene-PUW38_20980;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=PUW38_20980 CP118116.1 Protein Homology CDS 4338567 4338890 . - 0 ID=cds-WJG81037.1;Parent=gene-PUW38_20980;Dbxref=NCBI_GP:WJG81037.1;Name=WJG81037.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=PUW38_20980;product=superoxide response transcriptional regulator SoxS;protein_id=WJG81037.1;transl_table=11 CP118116.1 Genbank pseudogene 4338977 4339433 . + . ID=gene-PUW38_20985;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=pseudogene;locus_tag=PUW38_20985;pseudo=true CP118116.1 Protein Homology CDS 4338977 4339433 . + 0 ID=cds-PUW38_20985;Parent=gene-PUW38_20985;Note=frameshifted;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=PUW38_20985;product=redox-sensitive transcriptional activator SoxR;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4339726 4340394 . + . ID=gene-PUW38_20990;Name=PUW38_20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_20990 CP118116.1 Protein Homology CDS 4339726 4340394 . + 0 ID=cds-WJG81038.1;Parent=gene-PUW38_20990;Dbxref=NCBI_GP:WJG81038.1;Name=WJG81038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=PUW38_20990;product=glutathione S-transferase;protein_id=WJG81038.1;transl_table=11 CP118116.1 Genbank pseudogene 4340742 4342090 . + . ID=gene-PUW38_20995;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=pseudogene;gene_synonym=yjcD;locus_tag=PUW38_20995;pseudo=true CP118116.1 Protein Homology CDS 4340742 4342090 . + 0 ID=cds-PUW38_20995;Parent=gene-PUW38_20995;Note=frameshifted;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=PUW38_20995;product=guanine/hypoxanthine transporter GhxP;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4342240 4343884 . + . ID=gene-PUW38_21000;Name=PUW38_21000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21000;pseudo=true CP118116.1 Protein Homology CDS 4342240 4343884 . + 0 ID=cds-PUW38_21000;Parent=gene-PUW38_21000;Note=frameshifted;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=PUW38_21000;product=Na+/H+ antiporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4343979 4344866 . - . ID=gene-PUW38_21005;Name=PUW38_21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21005 CP118116.1 Protein Homology CDS 4343979 4344866 . - 0 ID=cds-WJG81039.1;Parent=gene-PUW38_21005;Dbxref=NCBI_GP:WJG81039.1;Name=WJG81039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=PUW38_21005;product=LysR family transcriptional regulator;protein_id=WJG81039.1;transl_table=11 CP118116.1 Genbank gene 4344970 4345380 . + . ID=gene-PUW38_21010;Name=PUW38_21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21010 CP118116.1 Protein Homology CDS 4344970 4345380 . + 0 ID=cds-WJG81040.1;Parent=gene-PUW38_21010;Dbxref=NCBI_GP:WJG81040.1;Name=WJG81040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=PUW38_21010;product=CidA/LrgA family protein;protein_id=WJG81040.1;transl_table=11 CP118116.1 Genbank gene 4345373 4346062 . + . ID=gene-PUW38_21015;Name=PUW38_21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21015 CP118116.1 Protein Homology CDS 4345373 4346062 . + 0 ID=cds-WJG81041.1;Parent=gene-PUW38_21015;Dbxref=NCBI_GP:WJG81041.1;Name=WJG81041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=PUW38_21015;product=LrgB family protein;protein_id=WJG81041.1;transl_table=11 CP118116.1 Genbank gene 4346100 4347749 . - . ID=gene-PUW38_21020;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=PUW38_21020 CP118116.1 Protein Homology CDS 4346100 4347749 . - 0 ID=cds-WJG81042.1;Parent=gene-PUW38_21020;Dbxref=NCBI_GP:WJG81042.1;Name=WJG81042.1;Ontology_term=GO:0006814,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=PUW38_21020;product=cation/acetate symporter ActP;protein_id=WJG81042.1;transl_table=11 CP118116.1 Genbank gene 4347746 4348060 . - . ID=gene-PUW38_21025;Name=PUW38_21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21025 CP118116.1 Protein Homology CDS 4347746 4348060 . - 0 ID=cds-WJG83305.1;Parent=gene-PUW38_21025;Dbxref=NCBI_GP:WJG83305.1;Name=WJG83305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=PUW38_21025;product=DUF485 domain-containing protein;protein_id=WJG83305.1;transl_table=11 CP118116.1 Genbank pseudogene 4348306 4350263 . - . ID=gene-PUW38_21030;Name=acs;gbkey=Gene;gene=acs;gene_biotype=pseudogene;locus_tag=PUW38_21030;pseudo=true CP118116.1 Protein Homology CDS 4348306 4350263 . - 0 ID=cds-PUW38_21030;Parent=gene-PUW38_21030;Note=frameshifted;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=PUW38_21030;product=acetate--CoA ligase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4350695 4352131 . + . ID=gene-PUW38_21035;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=PUW38_21035 CP118116.1 Protein Homology CDS 4350695 4352131 . + 0 ID=cds-WJG81043.1;Parent=gene-PUW38_21035;Dbxref=NCBI_GP:WJG81043.1;Name=WJG81043.1;Ontology_term=GO:0042279;gbkey=CDS;gene=nrfA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=PUW38_21035;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WJG81043.1;transl_table=11 CP118116.1 Genbank gene 4352243 4352809 . + . ID=gene-PUW38_21040;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=PUW38_21040 CP118116.1 Protein Homology CDS 4352243 4352809 . + 0 ID=cds-WJG81044.1;Parent=gene-PUW38_21040;Dbxref=NCBI_GP:WJG81044.1;Name=WJG81044.1;Ontology_term=GO:0006807,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=PUW38_21040;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WJG81044.1;transl_table=11 CP118116.1 Genbank gene 4352806 4353477 . + . ID=gene-PUW38_21045;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=PUW38_21045 CP118116.1 Protein Homology CDS 4352806 4353477 . + 0 ID=cds-WJG81045.1;Parent=gene-PUW38_21045;Dbxref=NCBI_GP:WJG81045.1;Name=WJG81045.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=PUW38_21045;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WJG81045.1;transl_table=11 CP118116.1 Genbank gene 4353474 4354430 . + . ID=gene-PUW38_21050;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=PUW38_21050 CP118116.1 Protein Homology CDS 4353474 4354430 . + 0 ID=cds-WJG81046.1;Parent=gene-PUW38_21050;Dbxref=NCBI_GP:WJG81046.1;Name=WJG81046.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=PUW38_21050;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WJG81046.1;transl_table=11 CP118116.1 Genbank pseudogene 4354423 4356661 . + . ID=gene-PUW38_21055;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=PUW38_21055;pseudo=true CP118116.1 Protein Homology CDS 4354423 4356661 . + 0 ID=cds-PUW38_21055;Parent=gene-PUW38_21055;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=PUW38_21055;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4356658 4357278 . + . ID=gene-PUW38_21060;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=PUW38_21060 CP118116.1 Protein Homology CDS 4356658 4357278 . + 0 ID=cds-WJG81047.1;Parent=gene-PUW38_21060;Dbxref=NCBI_GP:WJG81047.1;Name=WJG81047.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=PUW38_21060;product=heme lyase NrfEFG subunit NrfG;protein_id=WJG81047.1;transl_table=11 CP118116.1 Genbank gene 4357623 4358933 . + . ID=gene-PUW38_21065;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=PUW38_21065 CP118116.1 Protein Homology CDS 4357623 4358933 . + 0 ID=cds-WJG81048.1;Parent=gene-PUW38_21065;Dbxref=NCBI_GP:WJG81048.1;Name=WJG81048.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=PUW38_21065;product=glutamate/aspartate:proton symporter GltP;protein_id=WJG81048.1;transl_table=11 CP118116.1 Genbank gene 4359091 4359780 . - . ID=gene-PUW38_21070;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=PUW38_21070 CP118116.1 Protein Homology CDS 4359091 4359780 . - 0 ID=cds-WJG81049.1;Parent=gene-PUW38_21070;Dbxref=NCBI_GP:WJG81049.1;Name=WJG81049.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=PUW38_21070;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WJG81049.1;transl_table=11 CP118116.1 Genbank gene 4359957 4362104 . - . ID=gene-PUW38_21075;Name=PUW38_21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21075 CP118116.1 Protein Homology CDS 4359957 4362104 . - 0 ID=cds-WJG81050.1;Parent=gene-PUW38_21075;Dbxref=NCBI_GP:WJG81050.1;Name=WJG81050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=PUW38_21075;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WJG81050.1;transl_except=(pos:complement(4361685..4361687)%2Caa:Sec);transl_table=11 CP118116.1 Genbank gene 4362459 4363367 . - . ID=gene-PUW38_21080;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=PUW38_21080 CP118116.1 Protein Homology CDS 4362459 4363367 . - 0 ID=cds-WJG81051.1;Parent=gene-PUW38_21080;Dbxref=NCBI_GP:WJG81051.1;Name=WJG81051.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=PUW38_21080;product=lipid A hydroxylase LpxO;protein_id=WJG81051.1;transl_table=11 CP118116.1 Genbank gene 4363625 4364059 . - . ID=gene-PUW38_21085;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=PUW38_21085 CP118116.1 Protein Homology CDS 4363625 4364059 . - 0 ID=cds-WJG81052.1;Parent=gene-PUW38_21085;Dbxref=NCBI_GP:WJG81052.1;Name=WJG81052.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=PUW38_21085;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WJG81052.1;transl_table=11 CP118116.1 Genbank gene 4364211 4364654 . - . ID=gene-PUW38_21090;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=PUW38_21090 CP118116.1 Protein Homology CDS 4364211 4364654 . - 0 ID=cds-WJG81053.1;Parent=gene-PUW38_21090;Dbxref=NCBI_GP:WJG81053.1;Name=WJG81053.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=PUW38_21090;product=VOC family metalloprotein YjdN;protein_id=WJG81053.1;transl_table=11 CP118116.1 Genbank gene 4364774 4365109 . - . ID=gene-PUW38_21095;Name=PUW38_21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21095 CP118116.1 Protein Homology CDS 4364774 4365109 . - 0 ID=cds-WJG81054.1;Parent=gene-PUW38_21095;Dbxref=NCBI_GP:WJG81054.1;Name=WJG81054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=PUW38_21095;product=zinc ribbon domain-containing protein YjdM;protein_id=WJG81054.1;transl_table=11 CP118116.1 Genbank gene 4365577 4367079 . + . ID=gene-PUW38_21100;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=PUW38_21100 CP118116.1 Protein Homology CDS 4365577 4367079 . + 0 ID=cds-WJG81055.1;Parent=gene-PUW38_21100;Dbxref=NCBI_GP:WJG81055.1;Name=WJG81055.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=PUW38_21100;product=glycine betaine/L-proline transporter ProP;protein_id=WJG81055.1;transl_table=11 CP118116.1 Genbank gene 4367149 4367238 . + . ID=gene-PUW38_21105;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=PUW38_21105 CP118116.1 Protein Homology CDS 4367149 4367238 . + 0 ID=cds-WJG81056.1;Parent=gene-PUW38_21105;Dbxref=NCBI_GP:WJG81056.1;Name=WJG81056.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=PUW38_21105;product=LpxT activity modulator PmrR;protein_id=WJG81056.1;transl_table=11 CP118116.1 Genbank gene 4367246 4368316 . - . ID=gene-PUW38_21110;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=PUW38_21110 CP118116.1 Protein Homology CDS 4367246 4368316 . - 0 ID=cds-WJG83306.1;Parent=gene-PUW38_21110;Dbxref=NCBI_GP:WJG83306.1;Name=WJG83306.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=PUW38_21110;product=two-component system sensor histidine kinase PmrB;protein_id=WJG83306.1;transl_table=11 CP118116.1 Genbank gene 4368326 4368994 . - . ID=gene-PUW38_21115;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=PUW38_21115 CP118116.1 Protein Homology CDS 4368326 4368994 . - 0 ID=cds-WJG81057.1;Parent=gene-PUW38_21115;Dbxref=NCBI_GP:WJG81057.1;Name=WJG81057.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=PUW38_21115;product=two-component system response regulator PmrA;protein_id=WJG81057.1;transl_table=11 CP118116.1 Genbank gene 4368991 4370634 . - . ID=gene-PUW38_21120;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=PUW38_21120 CP118116.1 Protein Homology CDS 4368991 4370634 . - 0 ID=cds-WJG81058.1;Parent=gene-PUW38_21120;Dbxref=NCBI_GP:WJG81058.1;Name=WJG81058.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=PUW38_21120;product=phosphoethanolamine transferase EptA;protein_id=WJG81058.1;transl_table=11 CP118116.1 Genbank pseudogene 4370768 4372104 . - . ID=gene-PUW38_21125;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=pseudogene;locus_tag=PUW38_21125;pseudo=true CP118116.1 Protein Homology CDS 4370768 4372104 . - 0 ID=cds-PUW38_21125;Parent=gene-PUW38_21125;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=PUW38_21125;product=arginine/agmatine antiporter;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4372244 4373004 . - . ID=gene-PUW38_21130;Name=PUW38_21130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21130;pseudo=true CP118116.1 Protein Homology CDS 4372244 4373004 . - 0 ID=cds-PUW38_21130;Parent=gene-PUW38_21130;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=PUW38_21130;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4373302 4375568 . - . ID=gene-PUW38_21135;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=pseudogene;locus_tag=PUW38_21135;pseudo=true CP118116.1 Protein Homology CDS 4373302 4375568 . - 0 ID=cds-PUW38_21135;Parent=gene-PUW38_21135;Note=frameshifted;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=PUW38_21135;product=arginine decarboxylase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4375801 4376733 . - . ID=gene-PUW38_21140;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=PUW38_21140 CP118116.1 Protein Homology CDS 4375801 4376733 . - 0 ID=cds-WJG81059.1;Parent=gene-PUW38_21140;Dbxref=NCBI_GP:WJG81059.1;Name=WJG81059.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=PUW38_21140;product=transcriptional regulator MelR;protein_id=WJG81059.1;transl_table=11 CP118116.1 Genbank gene 4377002 4378357 . + . ID=gene-PUW38_21145;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=PUW38_21145 CP118116.1 Protein Homology CDS 4377002 4378357 . + 0 ID=cds-WJG81060.1;Parent=gene-PUW38_21145;Dbxref=NCBI_GP:WJG81060.1;Name=WJG81060.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=PUW38_21145;product=alpha-galactosidase;protein_id=WJG81060.1;transl_table=11 CP118116.1 Genbank gene 4378441 4379871 . + . ID=gene-PUW38_21150;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=PUW38_21150 CP118116.1 Protein Homology CDS 4378441 4379871 . + 0 ID=cds-WJG81061.1;Parent=gene-PUW38_21150;Dbxref=NCBI_GP:WJG81061.1;Name=WJG81061.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=PUW38_21150;product=melibiose:sodium transporter MelB;protein_id=WJG81061.1;transl_table=11 CP118116.1 Genbank pseudogene 4379978 4381623 . - . ID=gene-PUW38_21155;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=pseudogene;locus_tag=PUW38_21155;pseudo=true CP118116.1 Protein Homology CDS 4379978 4381623 . - 0 ID=cds-PUW38_21155;Parent=gene-PUW38_21155;Note=frameshifted;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=PUW38_21155;product=class I fumarate hydratase FumA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4381719 4383059 . - . ID=gene-PUW38_21160;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=PUW38_21160 CP118116.1 Protein Homology CDS 4381719 4383059 . - 0 ID=cds-WJG81062.1;Parent=gene-PUW38_21160;Dbxref=NCBI_GP:WJG81062.1;Name=WJG81062.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=PUW38_21160;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WJG81062.1;transl_table=11 CP118116.1 Genbank gene 4383206 4383472 . - . ID=gene-PUW38_21165;Name=PUW38_21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21165 CP118116.1 Protein Homology CDS 4383206 4383472 . - 0 ID=cds-WJG81063.1;Parent=gene-PUW38_21165;Dbxref=NCBI_GP:WJG81063.1;Name=WJG81063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=PUW38_21165;product=hypothetical protein;protein_id=WJG81063.1;transl_table=11 CP118116.1 Genbank gene 4383789 4384508 . - . ID=gene-PUW38_21170;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=PUW38_21170 CP118116.1 Protein Homology CDS 4383789 4384508 . - 0 ID=cds-WJG81064.1;Parent=gene-PUW38_21170;Dbxref=NCBI_GP:WJG81064.1;Name=WJG81064.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=PUW38_21170;product=two-component system response regulator DcuR;protein_id=WJG81064.1;transl_table=11 CP118116.1 Genbank pseudogene 4384505 4386135 . - . ID=gene-PUW38_21175;Name=PUW38_21175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21175;pseudo=true CP118116.1 Protein Homology CDS 4384505 4386135 . - 0 ID=cds-PUW38_21175;Parent=gene-PUW38_21175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=PUW38_21175;product=sensor histidine kinase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4386510 4388939 . + . ID=gene-PUW38_21180;Name=PUW38_21180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21180;pseudo=true CP118116.1 Protein Homology CDS 4386510 4388939 . + 0 ID=cds-PUW38_21180;Parent=gene-PUW38_21180;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=PUW38_21180;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4388953 4389579 . + . ID=gene-PUW38_21185;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW38_21185 CP118116.1 Protein Homology CDS 4388953 4389579 . + 0 ID=cds-WJG81065.1;Parent=gene-PUW38_21185;Dbxref=NCBI_GP:WJG81065.1;Name=WJG81065.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=PUW38_21185;product=dimethylsulfoxide reductase subunit B;protein_id=WJG81065.1;transl_table=11 CP118116.1 Genbank gene 4389572 4390345 . + . ID=gene-PUW38_21190;Name=PUW38_21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21190 CP118116.1 Protein Homology CDS 4389572 4390345 . + 0 ID=cds-WJG81066.1;Parent=gene-PUW38_21190;Dbxref=NCBI_GP:WJG81066.1;Name=WJG81066.1;Ontology_term=GO:0019645,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=PUW38_21190;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJG81066.1;transl_table=11 CP118116.1 Genbank gene 4390360 4391013 . + . ID=gene-PUW38_21195;Name=PUW38_21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21195 CP118116.1 Protein Homology CDS 4390360 4391013 . + 0 ID=cds-WJG81067.1;Parent=gene-PUW38_21195;Dbxref=NCBI_GP:WJG81067.1;Name=WJG81067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463173.1;locus_tag=PUW38_21195;product=molecular chaperone;protein_id=WJG81067.1;transl_table=11 CP118116.1 Genbank pseudogene 4391097 4392496 . - . ID=gene-PUW38_21200;Name=PUW38_21200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21200;pseudo=true CP118116.1 Protein Homology CDS 4391097 4392496 . - 0 ID=cds-PUW38_21200;Parent=gene-PUW38_21200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=PUW38_21200;product=DUF1996 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4392800 4393705 . + . ID=gene-PUW38_21205;Name=PUW38_21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21205 CP118116.1 Protein Homology CDS 4392800 4393705 . + 0 ID=cds-WJG81068.1;Parent=gene-PUW38_21205;Dbxref=NCBI_GP:WJG81068.1;Name=WJG81068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=PUW38_21205;product=YjiK family protein;protein_id=WJG81068.1;transl_table=11 CP118116.1 Genbank pseudogene 4393995 4394126 . - . ID=gene-PUW38_21210;Name=PUW38_21210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21210;pseudo=true CP118116.1 Protein Homology CDS 4393995 4394126 . - 0 ID=cds-PUW38_21210;Parent=gene-PUW38_21210;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=PUW38_21210;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4394238 4394486 . - . ID=gene-PUW38_21215;Name=PUW38_21215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21215;pseudo=true CP118116.1 Protein Homology CDS 4394238 4394486 . - 0 ID=cds-PUW38_21215;Parent=gene-PUW38_21215;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=PUW38_21215;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4394485 4394793 . + . ID=gene-PUW38_21220;Name=PUW38_21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21220 CP118116.1 Protein Homology CDS 4394485 4394793 . + 0 ID=cds-WJG81069.1;Parent=gene-PUW38_21220;Dbxref=NCBI_GP:WJG81069.1;Name=WJG81069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001673658.1;locus_tag=PUW38_21220;product=ABC transporter ATP-binding protein;protein_id=WJG81069.1;transl_table=11 CP118116.1 Genbank gene 4394786 4395073 . - . ID=gene-PUW38_21225;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=PUW38_21225 CP118116.1 Protein Homology CDS 4394786 4395073 . - 0 ID=cds-WJG81070.1;Parent=gene-PUW38_21225;Dbxref=NCBI_GP:WJG81070.1;Name=WJG81070.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=PUW38_21225;product=transcriptional regulator RtsB;protein_id=WJG81070.1;transl_table=11 CP118116.1 Genbank gene 4395070 4395945 . - . ID=gene-PUW38_21230;Name=PUW38_21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21230 CP118116.1 Protein Homology CDS 4395070 4395945 . - 0 ID=cds-WJG81071.1;Parent=gene-PUW38_21230;Dbxref=NCBI_GP:WJG81071.1;Name=WJG81071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=PUW38_21230;product=AraC family transcriptional regulator;protein_id=WJG81071.1;transl_table=11 CP118116.1 Genbank gene 4396211 4396432 . - . ID=gene-PUW38_21235;Name=PUW38_21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21235 CP118116.1 Protein Homology CDS 4396211 4396432 . - 0 ID=cds-WJG81072.1;Parent=gene-PUW38_21235;Dbxref=NCBI_GP:WJG81072.1;Name=WJG81072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=PUW38_21235;product=hypothetical protein;protein_id=WJG81072.1;transl_table=11 CP118116.1 Genbank gene 4396749 4397042 . + . ID=gene-PUW38_21240;Name=PUW38_21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21240 CP118116.1 Protein Homology CDS 4396749 4397042 . + 0 ID=cds-WJG81073.1;Parent=gene-PUW38_21240;Dbxref=NCBI_GP:WJG81073.1;Name=WJG81073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=PUW38_21240;product=DUF1778 domain-containing protein;protein_id=WJG81073.1;transl_table=11 CP118116.1 Genbank gene 4397039 4397530 . + . ID=gene-PUW38_21245;Name=PUW38_21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21245 CP118116.1 Protein Homology CDS 4397039 4397530 . + 0 ID=cds-WJG81074.1;Parent=gene-PUW38_21245;Dbxref=NCBI_GP:WJG81074.1;Name=WJG81074.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=PUW38_21245;product=GNAT family N-acetyltransferase;protein_id=WJG81074.1;transl_table=11 CP118116.1 Genbank gene 4397778 4398530 . - . ID=gene-PUW38_21250;Name=PUW38_21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21250 CP118116.1 Protein Homology CDS 4397778 4398530 . - 0 ID=cds-WJG81075.1;Parent=gene-PUW38_21250;Dbxref=NCBI_GP:WJG81075.1;Name=WJG81075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=PUW38_21250;product=non-specific acid phosphatase;protein_id=WJG81075.1;transl_table=11 CP118116.1 Genbank pseudogene 4398630 4398707 . - . ID=gene-PUW38_21255;Name=PUW38_21255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21255;pseudo=true CP118116.1 Protein Homology CDS 4398630 4398707 . - 0 ID=cds-PUW38_21255;Parent=gene-PUW38_21255;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=PUW38_21255;product=porin family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4399087 4399161 . + . ID=gene-PUW38_21260;Name=PUW38_21260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21260;pseudo=true CP118116.1 Protein Homology CDS 4399087 4399161 . + 0 ID=cds-PUW38_21260;Parent=gene-PUW38_21260;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565644.1;locus_tag=PUW38_21260;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4399241 4399316 . - . ID=gene-PUW38_21265;Name=PUW38_21265;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_21265 CP118116.1 tRNAscan-SE tRNA 4399241 4399316 . - . ID=rna-PUW38_21265;Parent=gene-PUW38_21265;anticodon=(pos:complement(4399281..4399283));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_21265;product=tRNA-Phe CP118116.1 tRNAscan-SE exon 4399241 4399316 . - . ID=exon-PUW38_21265-1;Parent=rna-PUW38_21265;anticodon=(pos:complement(4399281..4399283));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_21265;product=tRNA-Phe CP118116.1 Genbank gene 4399432 4400007 . - . ID=gene-PUW38_21270;Name=PUW38_21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21270 CP118116.1 Protein Homology CDS 4399432 4400007 . - 0 ID=cds-WJG81076.1;Parent=gene-PUW38_21270;Dbxref=NCBI_GP:WJG81076.1;Name=WJG81076.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=PUW38_21270;product=transcriptional regulator;protein_id=WJG81076.1;transl_table=11 CP118116.1 Genbank gene 4400044 4401747 . - . ID=gene-PUW38_21275;Name=PUW38_21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21275 CP118116.1 Protein Homology CDS 4400044 4401747 . - 0 ID=cds-WJG81077.1;Parent=gene-PUW38_21275;Dbxref=NCBI_GP:WJG81077.1;Name=WJG81077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=PUW38_21275;product=protein-disulfide reductase DsbD;protein_id=WJG81077.1;transl_table=11 CP118116.1 Genbank gene 4401723 4402070 . - . ID=gene-PUW38_21280;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=PUW38_21280 CP118116.1 Protein Homology CDS 4401723 4402070 . - 0 ID=cds-WJG81078.1;Parent=gene-PUW38_21280;Dbxref=NCBI_GP:WJG81078.1;Name=WJG81078.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=PUW38_21280;product=divalent cation tolerance protein CutA;protein_id=WJG81078.1;transl_table=11 CP118116.1 Genbank gene 4402191 4403492 . - . ID=gene-PUW38_21285;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=PUW38_21285 CP118116.1 Protein Homology CDS 4402191 4403492 . - 0 ID=cds-WJG81079.1;Parent=gene-PUW38_21285;Dbxref=NCBI_GP:WJG81079.1;Name=WJG81079.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=PUW38_21285;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WJG81079.1;transl_table=11 CP118116.1 Genbank pseudogene 4403607 4405042 . - . ID=gene-PUW38_21290;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=pseudogene;locus_tag=PUW38_21290;pseudo=true CP118116.1 Protein Homology CDS 4403607 4405042 . - 0 ID=cds-PUW38_21290;Parent=gene-PUW38_21290;Note=frameshifted;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=PUW38_21290;product=aspartate ammonia-lyase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4405383 4405859 . + . ID=gene-PUW38_21295;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=PUW38_21295 CP118116.1 Protein Homology CDS 4405383 4405859 . + 0 ID=cds-WJG81080.1;Parent=gene-PUW38_21295;Dbxref=NCBI_GP:WJG81080.1;Name=WJG81080.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=PUW38_21295;product=membrane protein FxsA;protein_id=WJG81080.1;transl_table=11 CP118116.1 Genbank pseudogene 4405918 4407155 . - . ID=gene-PUW38_21300;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=pseudogene;locus_tag=PUW38_21300;pseudo=true CP118116.1 Protein Homology CDS 4405918 4407155 . - 0 ID=cds-PUW38_21300;Parent=gene-PUW38_21300;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=PUW38_21300;product=L-methionine/branched-chain amino acid transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4407432 4407725 . + . ID=gene-PUW38_21305;Name=PUW38_21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21305 CP118116.1 Protein Homology CDS 4407432 4407725 . + 0 ID=cds-WJG83307.1;Parent=gene-PUW38_21305;Dbxref=NCBI_GP:WJG83307.1;Name=WJG83307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=PUW38_21305;product=co-chaperone GroES;protein_id=WJG83307.1;transl_table=11 CP118116.1 Genbank gene 4407769 4409415 . + . ID=gene-PUW38_21310;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=PUW38_21310 CP118116.1 Protein Homology CDS 4407769 4409415 . + 0 ID=cds-WJG81081.1;Parent=gene-PUW38_21310;Dbxref=NCBI_GP:WJG81081.1;Name=WJG81081.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=PUW38_21310;product=chaperonin GroEL;protein_id=WJG81081.1;transl_table=11 CP118116.1 Genbank gene 4409659 4410012 . + . ID=gene-PUW38_21315;Name=PUW38_21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21315 CP118116.1 Protein Homology CDS 4409659 4410012 . + 0 ID=cds-WJG81082.1;Parent=gene-PUW38_21315;Dbxref=NCBI_GP:WJG81082.1;Name=WJG81082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=PUW38_21315;product=DUF4156 domain-containing protein;protein_id=WJG81082.1;transl_table=11 CP118116.1 Genbank pseudogene 4410060 4410917 . - . ID=gene-PUW38_21320;Name=PUW38_21320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21320;pseudo=true CP118116.1 Protein Homology CDS 4410060 4410917 . - 0 ID=cds-PUW38_21320;Parent=gene-PUW38_21320;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=PUW38_21320;product=YjeJ family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4411199 4412227 . - . ID=gene-PUW38_21325;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=PUW38_21325 CP118116.1 Protein Homology CDS 4411199 4412227 . - 0 ID=cds-WJG81083.1;Parent=gene-PUW38_21325;Dbxref=NCBI_GP:WJG81083.1;Name=WJG81083.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=PUW38_21325;product=EF-P beta-lysylation protein EpmB;protein_id=WJG81083.1;transl_table=11 CP118116.1 Genbank gene 4412268 4412834 . + . ID=gene-PUW38_21330;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=PUW38_21330 CP118116.1 Protein Homology CDS 4412268 4412834 . + 0 ID=cds-WJG81084.1;Parent=gene-PUW38_21330;Dbxref=NCBI_GP:WJG81084.1;Name=WJG81084.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=PUW38_21330;product=elongation factor P;protein_id=WJG81084.1;transl_table=11 CP118116.1 Genbank gene 4412895 4413029 . + . ID=gene-PUW38_21335;Name=PUW38_21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21335 CP118116.1 Protein Homology CDS 4412895 4413029 . + 0 ID=cds-WJG83308.1;Parent=gene-PUW38_21335;Dbxref=NCBI_GP:WJG83308.1;Name=WJG83308.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=PUW38_21335;product=entericidin A/B family lipoprotein;protein_id=WJG83308.1;transl_table=11 CP118116.1 Genbank gene 4413137 4413283 . + . ID=gene-PUW38_21340;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=PUW38_21340 CP118116.1 Protein Homology CDS 4413137 4413283 . + 0 ID=cds-WJG81085.1;Parent=gene-PUW38_21340;Dbxref=NCBI_GP:WJG81085.1;Name=WJG81085.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=PUW38_21340;product=lipoprotein toxin entericidin B;protein_id=WJG81085.1;transl_table=11 CP118116.1 Genbank gene 4413314 4413901 . - . ID=gene-PUW38_21345;Name=PUW38_21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21345 CP118116.1 Protein Homology CDS 4413314 4413901 . - 0 ID=cds-WJG81086.1;Parent=gene-PUW38_21345;Dbxref=NCBI_GP:WJG81086.1;Name=WJG81086.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=PUW38_21345;product=LuxR C-terminal-related transcriptional regulator;protein_id=WJG81086.1;transl_table=11 CP118116.1 Genbank gene 4414158 4414475 . + . ID=gene-PUW38_21350;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=PUW38_21350 CP118116.1 Protein Homology CDS 4414158 4414475 . + 0 ID=cds-WJG81087.1;Parent=gene-PUW38_21350;Dbxref=NCBI_GP:WJG81087.1;Name=WJG81087.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=PUW38_21350;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WJG81087.1;transl_table=11 CP118116.1 Genbank gene 4414492 4415025 . - . ID=gene-PUW38_21355;Name=PUW38_21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21355 CP118116.1 Protein Homology CDS 4414492 4415025 . - 0 ID=cds-WJG81088.1;Parent=gene-PUW38_21355;Dbxref=NCBI_GP:WJG81088.1;Name=WJG81088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=PUW38_21355;product=lipocalin family protein;protein_id=WJG81088.1;transl_table=11 CP118116.1 Genbank pseudogene 4415137 4415494 . - . ID=gene-PUW38_21360;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=pseudogene;locus_tag=PUW38_21360;pseudo=true CP118116.1 Protein Homology CDS 4415137 4415494 . - 0 ID=cds-PUW38_21360;Parent=gene-PUW38_21360;Note=frameshifted;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=PUW38_21360;product=fumarate reductase subunit FrdD;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4415505 4415900 . - . ID=gene-PUW38_21365;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=PUW38_21365 CP118116.1 Protein Homology CDS 4415505 4415900 . - 0 ID=cds-WJG81089.1;Parent=gene-PUW38_21365;Dbxref=NCBI_GP:WJG81089.1;Name=WJG81089.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=PUW38_21365;product=fumarate reductase subunit FrdC;protein_id=WJG81089.1;transl_table=11 CP118116.1 Genbank gene 4415911 4416645 . - . ID=gene-PUW38_21370;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=PUW38_21370 CP118116.1 Protein Homology CDS 4415911 4416645 . - 0 ID=cds-WJG81090.1;Parent=gene-PUW38_21370;Dbxref=NCBI_GP:WJG81090.1;Name=WJG81090.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=PUW38_21370;product=fumarate reductase iron-sulfur protein;protein_id=WJG81090.1;transl_table=11 CP118116.1 Genbank gene 4416638 4418428 . - . ID=gene-PUW38_21375;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=PUW38_21375 CP118116.1 Protein Homology CDS 4416638 4418428 . - 0 ID=cds-WJG81091.1;Parent=gene-PUW38_21375;Dbxref=NCBI_GP:WJG81091.1;Name=WJG81091.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=PUW38_21375;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WJG81091.1;transl_table=11 CP118116.1 Genbank gene 4418751 4419728 . + . ID=gene-PUW38_21380;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=PUW38_21380 CP118116.1 Protein Homology CDS 4418751 4419728 . + 0 ID=cds-WJG81092.1;Parent=gene-PUW38_21380;Dbxref=NCBI_GP:WJG81092.1;Name=WJG81092.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=PUW38_21380;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WJG81092.1;transl_table=11 CP118116.1 Genbank gene 4419954 4421456 . + . ID=gene-PUW38_21385;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=PUW38_21385 CP118116.1 Protein Homology CDS 4419954 4421456 . + 0 ID=cds-WJG81093.1;Parent=gene-PUW38_21385;Dbxref=NCBI_GP:WJG81093.1;Name=WJG81093.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=PUW38_21385;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WJG81093.1;transl_table=11 CP118116.1 Genbank gene 4421508 4421822 . + . ID=gene-PUW38_21390;Name=PUW38_21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21390 CP118116.1 Protein Homology CDS 4421508 4421822 . + 0 ID=cds-WJG81094.1;Parent=gene-PUW38_21390;Dbxref=NCBI_GP:WJG81094.1;Name=WJG81094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463210.1;locus_tag=PUW38_21390;product=YjeO family protein;protein_id=WJG81094.1;transl_table=11 CP118116.1 Genbank gene 4421889 4425215 . - . ID=gene-PUW38_21395;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=PUW38_21395 CP118116.1 Protein Homology CDS 4421889 4425215 . - 0 ID=cds-WJG81095.1;Parent=gene-PUW38_21395;Dbxref=NCBI_GP:WJG81095.1;Name=WJG81095.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=PUW38_21395;product=miniconductance mechanosensitive channel MscM;protein_id=WJG81095.1;transl_table=11 CP118116.1 Genbank gene 4425234 4426202 . - . ID=gene-PUW38_21400;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PUW38_21400 CP118116.1 Protein Homology CDS 4425234 4426202 . - 0 ID=cds-WJG81096.1;Parent=gene-PUW38_21400;Dbxref=NCBI_GP:WJG81096.1;Name=WJG81096.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=PUW38_21400;product=archaetidylserine decarboxylase;protein_id=WJG81096.1;transl_table=11 CP118116.1 Genbank gene 4426294 4427346 . - . ID=gene-PUW38_21405;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=PUW38_21405 CP118116.1 Protein Homology CDS 4426294 4427346 . - 0 ID=cds-WJG81097.1;Parent=gene-PUW38_21405;Dbxref=NCBI_GP:WJG81097.1;Name=WJG81097.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=PUW38_21405;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WJG81097.1;transl_table=11 CP118116.1 Genbank gene 4427453 4427998 . + . ID=gene-PUW38_21410;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=PUW38_21410 CP118116.1 Protein Homology CDS 4427453 4427998 . + 0 ID=cds-WJG81098.1;Parent=gene-PUW38_21410;Dbxref=NCBI_GP:WJG81098.1;Name=WJG81098.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=PUW38_21410;product=oligoribonuclease;protein_id=WJG81098.1;transl_table=11 CP118116.1 Genbank gene 4428060 4428800 . - . ID=gene-PUW38_21415;Name=PUW38_21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21415 CP118116.1 Protein Homology CDS 4428060 4428800 . - 0 ID=cds-WJG81099.1;Parent=gene-PUW38_21415;Dbxref=NCBI_GP:WJG81099.1;Name=WJG81099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=PUW38_21415;product=arginine ABC transporter substrate-binding protein;protein_id=WJG81099.1;transl_table=11 CP118116.1 Genbank gene 4429099 4429174 . + . ID=gene-PUW38_21420;Name=PUW38_21420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_21420 CP118116.1 tRNAscan-SE tRNA 4429099 4429174 . + . ID=rna-PUW38_21420;Parent=gene-PUW38_21420;anticodon=(pos:4429132..4429134);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_21420;product=tRNA-Gly CP118116.1 tRNAscan-SE exon 4429099 4429174 . + . ID=exon-PUW38_21420-1;Parent=rna-PUW38_21420;anticodon=(pos:4429132..4429134);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_21420;product=tRNA-Gly CP118116.1 Genbank gene 4429331 4429406 . + . ID=gene-PUW38_21425;Name=PUW38_21425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_21425 CP118116.1 tRNAscan-SE tRNA 4429331 4429406 . + . ID=rna-PUW38_21425;Parent=gene-PUW38_21425;anticodon=(pos:4429364..4429366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_21425;product=tRNA-Gly CP118116.1 tRNAscan-SE exon 4429331 4429406 . + . ID=exon-PUW38_21425-1;Parent=rna-PUW38_21425;anticodon=(pos:4429364..4429366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_21425;product=tRNA-Gly CP118116.1 Genbank gene 4429563 4429638 . + . ID=gene-PUW38_21430;Name=PUW38_21430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_21430 CP118116.1 tRNAscan-SE tRNA 4429563 4429638 . + . ID=rna-PUW38_21430;Parent=gene-PUW38_21430;anticodon=(pos:4429596..4429598);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_21430;product=tRNA-Gly CP118116.1 tRNAscan-SE exon 4429563 4429638 . + . ID=exon-PUW38_21430-1;Parent=rna-PUW38_21430;anticodon=(pos:4429596..4429598);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_21430;product=tRNA-Gly CP118116.1 Genbank gene 4429908 4431047 . - . ID=gene-PUW38_21435;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=PUW38_21435 CP118116.1 Protein Homology CDS 4429908 4431047 . - 0 ID=cds-WJG81100.1;Parent=gene-PUW38_21435;Dbxref=NCBI_GP:WJG81100.1;Name=WJG81100.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=PUW38_21435;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WJG81100.1;transl_table=11 CP118116.1 Genbank pseudogene 4431046 4432592 . + . ID=gene-PUW38_21440;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=pseudogene;locus_tag=PUW38_21440;pseudo=true CP118116.1 Protein Homology CDS 4431046 4432592 . + 0 ID=cds-PUW38_21440;Parent=gene-PUW38_21440;Note=frameshifted;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=PUW38_21440;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4432564 4433025 . + . ID=gene-PUW38_21445;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=PUW38_21445 CP118116.1 Protein Homology CDS 4432564 4433025 . + 0 ID=cds-WJG81101.1;Parent=gene-PUW38_21445;Dbxref=NCBI_GP:WJG81101.1;Name=WJG81101.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=PUW38_21445;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WJG81101.1;transl_table=11 CP118116.1 Genbank gene 4433042 4434361 . + . ID=gene-PUW38_21450;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=PUW38_21450 CP118116.1 Protein Homology CDS 4433042 4434361 . + 0 ID=cds-WJG81102.1;Parent=gene-PUW38_21450;Dbxref=NCBI_GP:WJG81102.1;Name=WJG81102.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=PUW38_21450;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WJG81102.1;transl_table=11 CP118116.1 Genbank gene 4434371 4436227 . + . ID=gene-PUW38_21455;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=PUW38_21455 CP118116.1 Protein Homology CDS 4434371 4436227 . + 0 ID=cds-WJG81103.1;Parent=gene-PUW38_21455;Dbxref=NCBI_GP:WJG81103.1;Name=WJG81103.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=PUW38_21455;product=DNA mismatch repair endonuclease MutL;protein_id=WJG81103.1;transl_table=11 CP118116.1 Genbank gene 4436220 4437170 . + . ID=gene-PUW38_21460;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=PUW38_21460 CP118116.1 Protein Homology CDS 4436220 4437170 . + 0 ID=cds-WJG81104.1;Parent=gene-PUW38_21460;Dbxref=NCBI_GP:WJG81104.1;Name=WJG81104.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=PUW38_21460;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WJG81104.1;transl_table=11 CP118116.1 Genbank gene 4437253 4437561 . + . ID=gene-PUW38_21465;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=PUW38_21465 CP118116.1 Protein Homology CDS 4437253 4437561 . + 0 ID=cds-WJG81105.1;Parent=gene-PUW38_21465;Dbxref=NCBI_GP:WJG81105.1;Name=WJG81105.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=PUW38_21465;product=RNA chaperone Hfq;protein_id=WJG81105.1;transl_table=11 CP118116.1 Genbank gene 4437633 4438913 . + . ID=gene-PUW38_21470;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PUW38_21470 CP118116.1 Protein Homology CDS 4437633 4438913 . + 0 ID=cds-WJG81106.1;Parent=gene-PUW38_21470;Dbxref=NCBI_GP:WJG81106.1;Name=WJG81106.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=PUW38_21470;product=GTPase HflX;protein_id=WJG81106.1;transl_table=11 CP118116.1 Genbank gene 4439128 4440387 . + . ID=gene-PUW38_21475;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=PUW38_21475 CP118116.1 Protein Homology CDS 4439128 4440387 . + 0 ID=cds-WJG81107.1;Parent=gene-PUW38_21475;Dbxref=NCBI_GP:WJG81107.1;Name=WJG81107.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=PUW38_21475;product=FtsH protease activity modulator HflK;protein_id=WJG81107.1;transl_table=11 CP118116.1 Genbank gene 4440390 4441394 . + . ID=gene-PUW38_21480;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=PUW38_21480 CP118116.1 Protein Homology CDS 4440390 4441394 . + 0 ID=cds-WJG81108.1;Parent=gene-PUW38_21480;Dbxref=NCBI_GP:WJG81108.1;Name=WJG81108.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=PUW38_21480;product=protease modulator HflC;protein_id=WJG81108.1;transl_table=11 CP118116.1 Genbank gene 4441473 4441670 . + . ID=gene-PUW38_21485;Name=PUW38_21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21485 CP118116.1 Protein Homology CDS 4441473 4441670 . + 0 ID=cds-WJG81109.1;Parent=gene-PUW38_21485;Dbxref=NCBI_GP:WJG81109.1;Name=WJG81109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=PUW38_21485;product=DUF2065 family protein;protein_id=WJG81109.1;transl_table=11 CP118116.1 Genbank gene 4441773 4443071 . + . ID=gene-PUW38_21490;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=PUW38_21490 CP118116.1 Protein Homology CDS 4441773 4443071 . + 0 ID=cds-WJG81110.1;Parent=gene-PUW38_21490;Dbxref=NCBI_GP:WJG81110.1;Name=WJG81110.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=PUW38_21490;product=adenylosuccinate synthase;protein_id=WJG81110.1;transl_table=11 CP118116.1 Genbank gene 4443279 4443704 . + . ID=gene-PUW38_21495;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=PUW38_21495 CP118116.1 Protein Homology CDS 4443279 4443704 . + 0 ID=cds-WJG81111.1;Parent=gene-PUW38_21495;Dbxref=NCBI_GP:WJG81111.1;Name=WJG81111.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=PUW38_21495;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WJG81111.1;transl_table=11 CP118116.1 Genbank gene 4443742 4446180 . + . ID=gene-PUW38_21500;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=PUW38_21500 CP118116.1 Protein Homology CDS 4443742 4446180 . + 0 ID=cds-WJG81112.1;Parent=gene-PUW38_21500;Dbxref=NCBI_GP:WJG81112.1;Name=WJG81112.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=PUW38_21500;product=ribonuclease R;protein_id=WJG81112.1;transl_table=11 CP118116.1 Genbank gene 4446271 4447002 . + . ID=gene-PUW38_21505;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=PUW38_21505 CP118116.1 Protein Homology CDS 4446271 4447002 . + 0 ID=cds-WJG81113.1;Parent=gene-PUW38_21505;Dbxref=NCBI_GP:WJG81113.1;Name=WJG81113.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=PUW38_21505;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WJG81113.1;transl_table=11 CP118116.1 Genbank gene 4447134 4447538 . + . ID=gene-PUW38_21510;Name=PUW38_21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21510 CP118116.1 Protein Homology CDS 4447134 4447538 . + 0 ID=cds-WJG81114.1;Parent=gene-PUW38_21510;Dbxref=NCBI_GP:WJG81114.1;Name=WJG81114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=PUW38_21510;product=DUF2170 family protein;protein_id=WJG81114.1;transl_table=11 CP118116.1 Genbank gene 4447553 4448251 . + . ID=gene-PUW38_21515;Name=PUW38_21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21515 CP118116.1 Protein Homology CDS 4447553 4448251 . + 0 ID=cds-WJG81115.1;Parent=gene-PUW38_21515;Dbxref=NCBI_GP:WJG81115.1;Name=WJG81115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=PUW38_21515;product=PspA/IM30 family protein;protein_id=WJG81115.1;transl_table=11 CP118116.1 Genbank gene 4448251 4449321 . + . ID=gene-PUW38_21520;Name=PUW38_21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21520 CP118116.1 Protein Homology CDS 4448251 4449321 . + 0 ID=cds-WJG81116.1;Parent=gene-PUW38_21520;Dbxref=NCBI_GP:WJG81116.1;Name=WJG81116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=PUW38_21520;product=ion channel;protein_id=WJG81116.1;transl_table=11 CP118116.1 Genbank gene 4449294 4449977 . + . ID=gene-PUW38_21525;Name=PUW38_21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21525 CP118116.1 Protein Homology CDS 4449294 4449977 . + 0 ID=cds-WJG81117.1;Parent=gene-PUW38_21525;Dbxref=NCBI_GP:WJG81117.1;Name=WJG81117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=PUW38_21525;product=YjfK family protein;protein_id=WJG81117.1;transl_table=11 CP118116.1 Genbank pseudogene 4449995 4450392 . + . ID=gene-PUW38_21530;Name=PUW38_21530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21530;pseudo=true CP118116.1 Protein Homology CDS 4449995 4450392 . + 0 ID=cds-PUW38_21530;Parent=gene-PUW38_21530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=PUW38_21530;product=DUF350 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4450402 4451040 . + . ID=gene-PUW38_21535;Name=PUW38_21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21535 CP118116.1 Protein Homology CDS 4450402 4451040 . + 0 ID=cds-WJG81118.1;Parent=gene-PUW38_21535;Dbxref=NCBI_GP:WJG81118.1;Name=WJG81118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=PUW38_21535;product=DUF1190 domain-containing protein;protein_id=WJG81118.1;transl_table=11 CP118116.1 Genbank gene 4451043 4452206 . + . ID=gene-PUW38_21540;Name=PUW38_21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21540 CP118116.1 Protein Homology CDS 4451043 4452206 . + 0 ID=cds-WJG81119.1;Parent=gene-PUW38_21540;Dbxref=NCBI_GP:WJG81119.1;Name=WJG81119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=PUW38_21540;product=glutathionylspermidine synthase family protein;protein_id=WJG81119.1;transl_table=11 CP118116.1 Genbank gene 4452291 4453913 . + . ID=gene-PUW38_21545;Name=PUW38_21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21545 CP118116.1 Protein Homology CDS 4452291 4453913 . + 0 ID=cds-WJG81120.1;Parent=gene-PUW38_21545;Dbxref=NCBI_GP:WJG81120.1;Name=WJG81120.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=PUW38_21545;product=isovaleryl-CoA dehydrogenase;protein_id=WJG81120.1;transl_table=11 CP118116.1 Genbank gene 4453958 4454233 . - . ID=gene-PUW38_21550;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=PUW38_21550 CP118116.1 Protein Homology CDS 4453958 4454233 . - 0 ID=cds-WJG81121.1;Parent=gene-PUW38_21550;Dbxref=NCBI_GP:WJG81121.1;Name=WJG81121.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=PUW38_21550;product=DUF1471 family protease activator YjfN;protein_id=WJG81121.1;transl_table=11 CP118116.1 Genbank gene 4454364 4454693 . - . ID=gene-PUW38_21555;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=PUW38_21555 CP118116.1 Protein Homology CDS 4454364 4454693 . - 0 ID=cds-WJG81122.1;Parent=gene-PUW38_21555;Dbxref=NCBI_GP:WJG81122.1;Name=WJG81122.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=PUW38_21555;product=biofilm peroxide resistance protein BsmA;protein_id=WJG81122.1;transl_table=11 CP118116.1 Genbank gene 4454877 4455419 . + . ID=gene-PUW38_21560;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=PUW38_21560 CP118116.1 Protein Homology CDS 4454877 4455419 . + 0 ID=cds-WJG81123.1;Parent=gene-PUW38_21560;Dbxref=NCBI_GP:WJG81123.1;Name=WJG81123.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF007857.0;locus_tag=PUW38_21560;product=esterase;protein_id=WJG81123.1;transl_table=11 CP118116.1 Genbank gene 4455470 4455625 . + . ID=gene-PUW38_21565;Name=PUW38_21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21565 CP118116.1 Protein Homology CDS 4455470 4455625 . + 0 ID=cds-WJG81124.1;Parent=gene-PUW38_21565;Dbxref=NCBI_GP:WJG81124.1;Name=WJG81124.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012546.2;locus_tag=PUW38_21565;product=hypothetical protein;protein_id=WJG81124.1;transl_table=11 CP118116.1 Genbank gene 4455622 4456377 . - . ID=gene-PUW38_21570;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=PUW38_21570 CP118116.1 Protein Homology CDS 4455622 4456377 . - 0 ID=cds-WJG81125.1;Parent=gene-PUW38_21570;Dbxref=NCBI_GP:WJG81125.1;Name=WJG81125.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=PUW38_21570;product=HTH-type transcriptional regulator UlaR;protein_id=WJG81125.1;transl_table=11 CP118116.1 Genbank gene 4456482 4457546 . - . ID=gene-PUW38_21575;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=PUW38_21575 CP118116.1 Protein Homology CDS 4456482 4457546 . - 0 ID=cds-WJG81126.1;Parent=gene-PUW38_21575;Dbxref=NCBI_GP:WJG81126.1;Name=WJG81126.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=PUW38_21575;product=L-ascorbate 6-phosphate lactonase;protein_id=WJG81126.1;transl_table=11 CP118116.1 Genbank gene 4457909 4459306 . + . ID=gene-PUW38_21580;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=PUW38_21580 CP118116.1 Protein Homology CDS 4457909 4459306 . + 0 ID=cds-WJG81127.1;Parent=gene-PUW38_21580;Dbxref=NCBI_GP:WJG81127.1;Name=WJG81127.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=PUW38_21580;product=PTS ascorbate transporter subunit IIC;protein_id=WJG81127.1;transl_table=11 CP118116.1 Genbank gene 4459322 4459627 . + . ID=gene-PUW38_21585;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=PUW38_21585 CP118116.1 Protein Homology CDS 4459322 4459627 . + 0 ID=cds-WJG81128.1;Parent=gene-PUW38_21585;Dbxref=NCBI_GP:WJG81128.1;Name=WJG81128.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=PUW38_21585;product=PTS ascorbate transporter subunit IIB;protein_id=WJG81128.1;transl_table=11 CP118116.1 Genbank gene 4459637 4460101 . + . ID=gene-PUW38_21590;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=PUW38_21590 CP118116.1 Protein Homology CDS 4459637 4460101 . + 0 ID=cds-WJG81129.1;Parent=gene-PUW38_21590;Dbxref=NCBI_GP:WJG81129.1;Name=WJG81129.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=PUW38_21590;product=PTS ascorbate transporter subunit IIA;protein_id=WJG81129.1;transl_table=11 CP118116.1 Genbank gene 4460115 4460765 . + . ID=gene-PUW38_21595;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PUW38_21595 CP118116.1 Protein Homology CDS 4460115 4460765 . + 0 ID=cds-WJG81130.1;Parent=gene-PUW38_21595;Dbxref=NCBI_GP:WJG81130.1;Name=WJG81130.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=PUW38_21595;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WJG81130.1;transl_table=11 CP118116.1 Genbank gene 4460775 4461629 . + . ID=gene-PUW38_21600;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=PUW38_21600 CP118116.1 Protein Homology CDS 4460775 4461629 . + 0 ID=cds-WJG81131.1;Parent=gene-PUW38_21600;Dbxref=NCBI_GP:WJG81131.1;Name=WJG81131.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=PUW38_21600;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WJG81131.1;transl_table=11 CP118116.1 Genbank gene 4461629 4462315 . + . ID=gene-PUW38_21605;Name=PUW38_21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21605 CP118116.1 Protein Homology CDS 4461629 4462315 . + 0 ID=cds-WJG81132.1;Parent=gene-PUW38_21605;Dbxref=NCBI_GP:WJG81132.1;Name=WJG81132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=PUW38_21605;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJG81132.1;transl_table=11 CP118116.1 Genbank gene 4462444 4462719 . - . ID=gene-PUW38_21610;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=PUW38_21610 CP118116.1 Protein Homology CDS 4462444 4462719 . - 0 ID=cds-WJG83309.1;Parent=gene-PUW38_21610;Dbxref=NCBI_GP:WJG83309.1;Name=WJG83309.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463250.1;locus_tag=PUW38_21610;product=DUF1471 family protein YjfY;protein_id=WJG83309.1;transl_table=11 CP118116.1 Genbank pseudogene 4462913 4463118 . + . ID=gene-PUW38_21615;Name=PUW38_21615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21615;pseudo=true CP118116.1 Protein Homology CDS 4462913 4463118 . + 0 ID=cds-PUW38_21615;Parent=gene-PUW38_21615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=PUW38_21615;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4463189 4463584 . + . ID=gene-PUW38_21620;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=PUW38_21620 CP118116.1 Protein Homology CDS 4463189 4463584 . + 0 ID=cds-WJG81133.1;Parent=gene-PUW38_21620;Dbxref=NCBI_GP:WJG81133.1;Name=WJG81133.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=PUW38_21620;product=30S ribosomal protein S6;protein_id=WJG81133.1;transl_table=11 CP118116.1 Genbank gene 4463591 4463905 . + . ID=gene-PUW38_21625;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=PUW38_21625 CP118116.1 Protein Homology CDS 4463591 4463905 . + 0 ID=cds-WJG81134.1;Parent=gene-PUW38_21625;Dbxref=NCBI_GP:WJG81134.1;Name=WJG81134.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=PUW38_21625;product=primosomal replication protein N;protein_id=WJG81134.1;transl_table=11 CP118116.1 Genbank gene 4463910 4464137 . + . ID=gene-PUW38_21630;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=PUW38_21630 CP118116.1 Protein Homology CDS 4463910 4464137 . + 0 ID=cds-WJG81135.1;Parent=gene-PUW38_21630;Dbxref=NCBI_GP:WJG81135.1;Name=WJG81135.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=PUW38_21630;product=30S ribosomal protein S18;protein_id=WJG81135.1;transl_table=11 CP118116.1 Genbank gene 4464179 4464628 . + . ID=gene-PUW38_21635;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=PUW38_21635 CP118116.1 Protein Homology CDS 4464179 4464628 . + 0 ID=cds-WJG81136.1;Parent=gene-PUW38_21635;Dbxref=NCBI_GP:WJG81136.1;Name=WJG81136.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=PUW38_21635;product=50S ribosomal protein L9;protein_id=WJG81136.1;transl_table=11 CP118116.1 Genbank pseudogene 4464776 4465701 . + . ID=gene-PUW38_21640;Name=PUW38_21640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21640;pseudo=true CP118116.1 Protein Homology CDS 4464776 4465701 . + 0 ID=cds-PUW38_21640;Parent=gene-PUW38_21640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=PUW38_21640;product=DMT family transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4465751 4466386 . - . ID=gene-PUW38_21645;Name=PUW38_21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21645 CP118116.1 Protein Homology CDS 4465751 4466386 . - 0 ID=cds-WJG81137.1;Parent=gene-PUW38_21645;Dbxref=NCBI_GP:WJG81137.1;Name=WJG81137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=PUW38_21645;product=OapA family protein;protein_id=WJG81137.1;transl_table=11 CP118116.1 Genbank gene 4466606 4467226 . + . ID=gene-PUW38_21650;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=PUW38_21650 CP118116.1 Protein Homology CDS 4466606 4467226 . + 0 ID=cds-WJG81138.1;Parent=gene-PUW38_21650;Dbxref=NCBI_GP:WJG81138.1;Name=WJG81138.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=PUW38_21650;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJG81138.1;transl_table=11 CP118116.1 Genbank gene 4467522 4468925 . + . ID=gene-PUW38_21655;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=PUW38_21655 CP118116.1 Protein Homology CDS 4467522 4468925 . + 0 ID=cds-WJG81139.1;Parent=gene-PUW38_21655;Dbxref=NCBI_GP:WJG81139.1;Name=WJG81139.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541380.1;locus_tag=PUW38_21655;product=D-serine/D-alanine/glycine transporter;protein_id=WJG81139.1;transl_table=11 CP118116.1 Genbank gene 4469263 4470402 . + . ID=gene-PUW38_21660;Name=PUW38_21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21660 CP118116.1 Protein Homology CDS 4469263 4470402 . + 0 ID=cds-WJG81140.1;Parent=gene-PUW38_21660;Dbxref=NCBI_GP:WJG81140.1;Name=WJG81140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155541.1;locus_tag=PUW38_21660;product=DKNYY domain-containing protein;protein_id=WJG81140.1;transl_table=11 CP118116.1 Genbank gene 4470417 4471805 . + . ID=gene-PUW38_21665;Name=PUW38_21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21665 CP118116.1 Protein Homology CDS 4470417 4471805 . + 0 ID=cds-WJG81141.1;Parent=gene-PUW38_21665;Dbxref=NCBI_GP:WJG81141.1;Name=WJG81141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944334.1;locus_tag=PUW38_21665;product=hypothetical protein;protein_id=WJG81141.1;transl_table=11 CP118116.1 Genbank gene 4471872 4472534 . - . ID=gene-PUW38_21670;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=PUW38_21670 CP118116.1 Protein Homology CDS 4471872 4472534 . - 0 ID=cds-WJG81142.1;Parent=gene-PUW38_21670;Dbxref=NCBI_GP:WJG81142.1;Name=WJG81142.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=PUW38_21670;product=iron-sulfur cluster repair protein YtfE;protein_id=WJG81142.1;transl_table=11 CP118116.1 Genbank pseudogene 4472637 4473598 . - . ID=gene-PUW38_21675;Name=PUW38_21675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21675;pseudo=true CP118116.1 Protein Homology CDS 4472637 4473598 . - 0 ID=cds-PUW38_21675;Parent=gene-PUW38_21675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=PUW38_21675;product=DMT family transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4473679 4474527 . - . ID=gene-PUW38_21680;Name=PUW38_21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21680 CP118116.1 Protein Homology CDS 4473679 4474527 . - 0 ID=cds-WJG81143.1;Parent=gene-PUW38_21680;Dbxref=NCBI_GP:WJG81143.1;Name=WJG81143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=PUW38_21680;product=SDR family oxidoreductase;protein_id=WJG81143.1;transl_table=11 CP118116.1 Genbank gene 4474615 4475001 . + . ID=gene-PUW38_21685;Name=PUW38_21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21685 CP118116.1 Protein Homology CDS 4474615 4475001 . + 0 ID=cds-WJG81144.1;Parent=gene-PUW38_21685;Dbxref=NCBI_GP:WJG81144.1;Name=WJG81144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=PUW38_21685;product=helix-turn-helix domain-containing protein;protein_id=WJG81144.1;transl_table=11 CP118116.1 Genbank gene 4475059 4477002 . - . ID=gene-PUW38_21690;Name=PUW38_21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21690 CP118116.1 Protein Homology CDS 4475059 4477002 . - 0 ID=cds-WJG81145.1;Parent=gene-PUW38_21690;Dbxref=NCBI_GP:WJG81145.1;Name=WJG81145.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=PUW38_21690;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WJG81145.1;transl_table=11 CP118116.1 Genbank gene 4477270 4478010 . + . ID=gene-PUW38_21695;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=PUW38_21695 CP118116.1 Protein Homology CDS 4477270 4478010 . + 0 ID=cds-WJG81146.1;Parent=gene-PUW38_21695;Dbxref=NCBI_GP:WJG81146.1;Name=WJG81146.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=PUW38_21695;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WJG81146.1;transl_table=11 CP118116.1 Genbank gene 4478000 4478557 . - . ID=gene-PUW38_21700;Name=PUW38_21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21700 CP118116.1 Protein Homology CDS 4478000 4478557 . - 0 ID=cds-WJG81147.1;Parent=gene-PUW38_21700;Dbxref=NCBI_GP:WJG81147.1;Name=WJG81147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=PUW38_21700;product=YtfJ family protein;protein_id=WJG81147.1;transl_table=11 CP118116.1 Genbank gene 4478884 4479090 . + . ID=gene-PUW38_21705;Name=PUW38_21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21705 CP118116.1 Protein Homology CDS 4478884 4479090 . + 0 ID=cds-WJG81148.1;Parent=gene-PUW38_21705;Dbxref=NCBI_GP:WJG81148.1;Name=WJG81148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=PUW38_21705;product=DUF1107 domain-containing protein;protein_id=WJG81148.1;transl_table=11 CP118116.1 Genbank gene 4479175 4480518 . - . ID=gene-PUW38_21710;Name=PUW38_21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21710 CP118116.1 Protein Homology CDS 4479175 4480518 . - 0 ID=cds-WJG81149.1;Parent=gene-PUW38_21710;Dbxref=NCBI_GP:WJG81149.1;Name=WJG81149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=PUW38_21710;product=hemolysin family protein;protein_id=WJG81149.1;transl_table=11 CP118116.1 Genbank gene 4480701 4481339 . - . ID=gene-PUW38_21715;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=PUW38_21715 CP118116.1 Protein Homology CDS 4480701 4481339 . - 0 ID=cds-WJG81150.1;Parent=gene-PUW38_21715;Dbxref=NCBI_GP:WJG81150.1;Name=WJG81150.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=PUW38_21715;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WJG81150.1;transl_table=11 CP118116.1 Genbank gene 4481552 4483285 . + . ID=gene-PUW38_21720;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=PUW38_21720 CP118116.1 Protein Homology CDS 4481552 4483285 . + 0 ID=cds-WJG81151.1;Parent=gene-PUW38_21720;Dbxref=NCBI_GP:WJG81151.1;Name=WJG81151.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=PUW38_21720;product=autotransporter assembly complex protein TamA;protein_id=WJG81151.1;transl_table=11 CP118116.1 Genbank gene 4483282 4487061 . + . ID=gene-PUW38_21725;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=PUW38_21725 CP118116.1 Protein Homology CDS 4483282 4487061 . + 0 ID=cds-WJG81152.1;Parent=gene-PUW38_21725;Dbxref=NCBI_GP:WJG81152.1;Name=WJG81152.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=PUW38_21725;product=autotransporter assembly complex protein TamB;protein_id=WJG81152.1;transl_table=11 CP118116.1 Genbank gene 4487064 4487408 . + . ID=gene-PUW38_21730;Name=PUW38_21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21730 CP118116.1 Protein Homology CDS 4487064 4487408 . + 0 ID=cds-WJG81153.1;Parent=gene-PUW38_21730;Dbxref=NCBI_GP:WJG81153.1;Name=WJG81153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=PUW38_21730;product=gamma-glutamylcyclotransferase;protein_id=WJG81153.1;transl_table=11 CP118116.1 Genbank gene 4487462 4488667 . - . ID=gene-PUW38_21735;Name=PUW38_21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21735 CP118116.1 Protein Homology CDS 4487462 4488667 . - 0 ID=cds-WJG81154.1;Parent=gene-PUW38_21735;Dbxref=NCBI_GP:WJG81154.1;Name=WJG81154.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=PUW38_21735;product=MFS transporter;protein_id=WJG81154.1;transl_table=11 CP118116.1 Genbank pseudogene 4488664 4489827 . - . ID=gene-PUW38_21740;Name=PUW38_21740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21740;pseudo=true CP118116.1 Protein Homology CDS 4488664 4489827 . - 0 ID=cds-PUW38_21740;Parent=gene-PUW38_21740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=PUW38_21740;product=metallo-dependent hydrolase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4490237 4490767 . - . ID=gene-PUW38_21745;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=PUW38_21745 CP118116.1 Protein Homology CDS 4490237 4490767 . - 0 ID=cds-WJG81155.1;Parent=gene-PUW38_21745;Dbxref=NCBI_GP:WJG81155.1;Name=WJG81155.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=PUW38_21745;product=inorganic diphosphatase;protein_id=WJG81155.1;transl_table=11 CP118116.1 Genbank gene 4490994 4491992 . - . ID=gene-PUW38_21750;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=PUW38_21750 CP118116.1 Protein Homology CDS 4490994 4491992 . - 0 ID=cds-WJG81156.1;Parent=gene-PUW38_21750;Dbxref=NCBI_GP:WJG81156.1;Name=WJG81156.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=PUW38_21750;product=class 1 fructose-bisphosphatase;protein_id=WJG81156.1;transl_table=11 CP118116.1 Genbank gene 4492167 4493540 . + . ID=gene-PUW38_21755;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=PUW38_21755 CP118116.1 Protein Homology CDS 4492167 4493540 . + 0 ID=cds-WJG81157.1;Parent=gene-PUW38_21755;Dbxref=NCBI_GP:WJG81157.1;Name=WJG81157.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=PUW38_21755;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WJG81157.1;transl_table=11 CP118116.1 Genbank gene 4493647 4494198 . - . ID=gene-PUW38_21760;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=PUW38_21760 CP118116.1 Protein Homology CDS 4493647 4494198 . - 0 ID=cds-WJG81158.1;Parent=gene-PUW38_21760;Dbxref=NCBI_GP:WJG81158.1;Name=WJG81158.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=PUW38_21760;product=ribosome biogenesis factor YjgA;protein_id=WJG81158.1;transl_table=11 CP118116.1 Genbank gene 4494294 4495646 . + . ID=gene-PUW38_21765;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=PUW38_21765 CP118116.1 Protein Homology CDS 4494294 4495646 . + 0 ID=cds-WJG81159.1;Parent=gene-PUW38_21765;Dbxref=NCBI_GP:WJG81159.1;Name=WJG81159.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=PUW38_21765;product=metalloprotease PmbA;protein_id=WJG81159.1;transl_table=11 CP118116.1 Genbank gene 4495745 4496131 . + . ID=gene-PUW38_21770;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=PUW38_21770 CP118116.1 Protein Homology CDS 4495745 4496131 . + 0 ID=cds-WJG81160.1;Parent=gene-PUW38_21770;Dbxref=NCBI_GP:WJG81160.1;Name=WJG81160.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=PUW38_21770;product=cytochrome b562;protein_id=WJG81160.1;transl_table=11 CP118116.1 Genbank gene 4496409 4496747 . + . ID=gene-PUW38_21775;Name=PUW38_21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21775 CP118116.1 Protein Homology CDS 4496409 4496747 . + 0 ID=cds-WJG81161.1;Parent=gene-PUW38_21775;Dbxref=NCBI_GP:WJG81161.1;Name=WJG81161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=PUW38_21775;product=glycine dehydrogenase;protein_id=WJG81161.1;transl_table=11 CP118116.1 Genbank gene 4496758 4497120 . + . ID=gene-PUW38_21780;Name=PUW38_21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21780 CP118116.1 Protein Homology CDS 4496758 4497120 . + 0 ID=cds-WJG81162.1;Parent=gene-PUW38_21780;Dbxref=NCBI_GP:WJG81162.1;Name=WJG81162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=PUW38_21780;product=SFCGS family glycine-rich protein;protein_id=WJG81162.1;transl_table=11 CP118116.1 Genbank gene 4497120 4497422 . + . ID=gene-PUW38_21785;Name=PUW38_21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21785 CP118116.1 Protein Homology CDS 4497120 4497422 . + 0 ID=cds-WJG81163.1;Parent=gene-PUW38_21785;Dbxref=NCBI_GP:WJG81163.1;Name=WJG81163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=PUW38_21785;product=DUF4312 family protein;protein_id=WJG81163.1;transl_table=11 CP118116.1 Genbank pseudogene 4497445 4498220 . + . ID=gene-PUW38_21790;Name=PUW38_21790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21790;pseudo=true CP118116.1 Protein Homology CDS 4497445 4498220 . + 0 ID=cds-PUW38_21790;Parent=gene-PUW38_21790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=PUW38_21790;product=DUF4311 domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4498232 4498876 . + . ID=gene-PUW38_21795;Name=PUW38_21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21795 CP118116.1 Protein Homology CDS 4498232 4498876 . + 0 ID=cds-WJG81164.1;Parent=gene-PUW38_21795;Dbxref=NCBI_GP:WJG81164.1;Name=WJG81164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=PUW38_21795;product=DUF4310 family protein;protein_id=WJG81164.1;transl_table=11 CP118116.1 Genbank gene 4498935 4500068 . + . ID=gene-PUW38_21800;Name=PUW38_21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21800 CP118116.1 Protein Homology CDS 4498935 4500068 . + 0 ID=cds-WJG81165.1;Parent=gene-PUW38_21800;Dbxref=NCBI_GP:WJG81165.1;Name=WJG81165.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=PUW38_21800;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WJG81165.1;transl_table=11 CP118116.1 Genbank gene 4500052 4501170 . + . ID=gene-PUW38_21805;Name=PUW38_21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21805 CP118116.1 Protein Homology CDS 4500052 4501170 . + 0 ID=cds-WJG81166.1;Parent=gene-PUW38_21805;Dbxref=NCBI_GP:WJG81166.1;Name=WJG81166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=PUW38_21805;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WJG81166.1;transl_table=11 CP118116.1 Genbank pseudogene 4501167 4501907 . + . ID=gene-PUW38_21810;Name=PUW38_21810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21810;pseudo=true CP118116.1 Protein Homology CDS 4501167 4501907 . + 0 ID=cds-PUW38_21810;Parent=gene-PUW38_21810;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=PUW38_21810;product=KDGP aldolase family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4501924 4503837 . + . ID=gene-PUW38_21815;Name=PUW38_21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21815 CP118116.1 Protein Homology CDS 4501924 4503837 . + 0 ID=cds-WJG81167.1;Parent=gene-PUW38_21815;Dbxref=NCBI_GP:WJG81167.1;Name=WJG81167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=PUW38_21815;product=BglG family transcription antiterminator;protein_id=WJG81167.1;transl_table=11 CP118116.1 Genbank gene 4503915 4504157 . + . ID=gene-PUW38_21820;Name=PUW38_21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21820 CP118116.1 Protein Homology CDS 4503915 4504157 . + 0 ID=cds-WJG81168.1;Parent=gene-PUW38_21820;Dbxref=NCBI_GP:WJG81168.1;Name=WJG81168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=PUW38_21820;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WJG81168.1;transl_table=11 CP118116.1 Genbank gene 4504147 4504431 . + . ID=gene-PUW38_21825;Name=PUW38_21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21825 CP118116.1 Protein Homology CDS 4504147 4504431 . + 0 ID=cds-WJG81169.1;Parent=gene-PUW38_21825;Dbxref=NCBI_GP:WJG81169.1;Name=WJG81169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=PUW38_21825;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG81169.1;transl_table=11 CP118116.1 Genbank gene 4504435 4504899 . - . ID=gene-PUW38_21830;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=PUW38_21830 CP118116.1 Protein Homology CDS 4504435 4504899 . - 0 ID=cds-WJG81170.1;Parent=gene-PUW38_21830;Dbxref=NCBI_GP:WJG81170.1;Name=WJG81170.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=PUW38_21830;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WJG81170.1;transl_table=11 CP118116.1 Genbank gene 4505021 4507159 . - . ID=gene-PUW38_21835;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=PUW38_21835 CP118116.1 Protein Homology CDS 4505021 4507159 . - 0 ID=cds-WJG81171.1;Parent=gene-PUW38_21835;Dbxref=NCBI_GP:WJG81171.1;Name=WJG81171.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=PUW38_21835;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WJG81171.1;transl_table=11 CP118116.1 Genbank pseudogene 4507568 4509216 . - . ID=gene-PUW38_21840;Name=treC;gbkey=Gene;gene=treC;gene_biotype=pseudogene;locus_tag=PUW38_21840;pseudo=true CP118116.1 Protein Homology CDS 4507568 4509216 . - 0 ID=cds-PUW38_21840;Parent=gene-PUW38_21840;Note=frameshifted;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=PUW38_21840;product=alpha%2Calpha-phosphotrehalase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4509266 4510684 . - . ID=gene-PUW38_21845;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=PUW38_21845 CP118116.1 Protein Homology CDS 4509266 4510684 . - 0 ID=cds-WJG81172.1;Parent=gene-PUW38_21845;Dbxref=NCBI_GP:WJG81172.1;Name=WJG81172.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=PUW38_21845;product=PTS trehalose transporter subunit IIBC;protein_id=WJG81172.1;transl_table=11 CP118116.1 Genbank gene 4510822 4511769 . - . ID=gene-PUW38_21850;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=PUW38_21850 CP118116.1 Protein Homology CDS 4510822 4511769 . - 0 ID=cds-WJG81173.1;Parent=gene-PUW38_21850;Dbxref=NCBI_GP:WJG81173.1;Name=WJG81173.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=PUW38_21850;product=trehalose operon repressor TreR;protein_id=WJG81173.1;transl_table=11 CP118116.1 Genbank gene 4512153 4514861 . + . ID=gene-PUW38_21855;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PUW38_21855 CP118116.1 Protein Homology CDS 4512153 4514861 . + 0 ID=cds-WJG83310.1;Parent=gene-PUW38_21855;Dbxref=NCBI_GP:WJG83310.1;Name=WJG83310.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=PUW38_21855;product=magnesium-translocating P-type ATPase;protein_id=WJG83310.1;transl_table=11 CP118116.1 Genbank pseudogene 4514977 4515423 . - . ID=gene-PUW38_21860;Name=PUW38_21860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21860;pseudo=true CP118116.1 Protein Homology CDS 4514977 4515423 . - 0 ID=cds-PUW38_21860;Parent=gene-PUW38_21860;Note=internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=PUW38_21860;product=transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4515498 4515884 . - . ID=gene-PUW38_21865;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=PUW38_21865 CP118116.1 Protein Homology CDS 4515498 4515884 . - 0 ID=cds-WJG81174.1;Parent=gene-PUW38_21865;Dbxref=NCBI_GP:WJG81174.1;Name=WJG81174.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=PUW38_21865;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WJG81174.1;transl_table=11 CP118116.1 Genbank gene 4515961 4516422 . - . ID=gene-PUW38_21870;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=PUW38_21870 CP118116.1 Protein Homology CDS 4515961 4516422 . - 0 ID=cds-WJG81175.1;Parent=gene-PUW38_21870;Dbxref=NCBI_GP:WJG81175.1;Name=WJG81175.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=PUW38_21870;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WJG81175.1;transl_table=11 CP118116.1 Genbank gene 4516435 4517370 . - . ID=gene-PUW38_21875;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=PUW38_21875 CP118116.1 Protein Homology CDS 4516435 4517370 . - 0 ID=cds-WJG81176.1;Parent=gene-PUW38_21875;Dbxref=NCBI_GP:WJG81176.1;Name=WJG81176.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=PUW38_21875;product=aspartate carbamoyltransferase;protein_id=WJG81176.1;transl_table=11 CP118116.1 Genbank gene 4517406 4517507 . - . ID=gene-PUW38_21880;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=PUW38_21880 CP118116.1 Protein Homology CDS 4517406 4517507 . - 0 ID=cds-WJG81177.1;Parent=gene-PUW38_21880;Dbxref=NCBI_GP:WJG81177.1;Name=WJG81177.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=PUW38_21880;product=pyr operon leader peptide;protein_id=WJG81177.1;transl_table=11 CP118116.1 Genbank pseudogene 4517487 4517628 . + . ID=gene-PUW38_21885;Name=PUW38_21885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_21885;pseudo=true CP118116.1 Protein Homology CDS 4517487 4517628 . + 0 ID=cds-PUW38_21885;Parent=gene-PUW38_21885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=PUW38_21885;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4517598 4518086 . - . ID=gene-PUW38_21890;Name=PUW38_21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21890 CP118116.1 Protein Homology CDS 4517598 4518086 . - 0 ID=cds-WJG81178.1;Parent=gene-PUW38_21890;Dbxref=NCBI_GP:WJG81178.1;Name=WJG81178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=PUW38_21890;product=arginine repressor;protein_id=WJG81178.1;transl_table=11 CP118116.1 Genbank gene 4518273 4519676 . - . ID=gene-PUW38_21895;Name=PUW38_21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21895 CP118116.1 Protein Homology CDS 4518273 4519676 . - 0 ID=cds-WJG81179.1;Parent=gene-PUW38_21895;Dbxref=NCBI_GP:WJG81179.1;Name=WJG81179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=PUW38_21895;product=YfcC family protein;protein_id=WJG81179.1;transl_table=11 CP118116.1 Genbank gene 4519732 4520736 . - . ID=gene-PUW38_21900;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PUW38_21900 CP118116.1 Protein Homology CDS 4519732 4520736 . - 0 ID=cds-WJG81180.1;Parent=gene-PUW38_21900;Dbxref=NCBI_GP:WJG81180.1;Name=WJG81180.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=PUW38_21900;product=ornithine carbamoyltransferase;protein_id=WJG81180.1;transl_table=11 CP118116.1 Genbank gene 4520848 4521780 . - . ID=gene-PUW38_21905;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=PUW38_21905 CP118116.1 Protein Homology CDS 4520848 4521780 . - 0 ID=cds-WJG81181.1;Parent=gene-PUW38_21905;Dbxref=NCBI_GP:WJG81181.1;Name=WJG81181.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=PUW38_21905;product=carbamate kinase;protein_id=WJG81181.1;transl_table=11 CP118116.1 Genbank pseudogene 4521791 4523011 . - . ID=gene-PUW38_21910;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=pseudogene;locus_tag=PUW38_21910;pseudo=true CP118116.1 Protein Homology CDS 4521791 4523011 . - 0 ID=cds-PUW38_21910;Parent=gene-PUW38_21910;Note=internal stop;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=PUW38_21910;product=arginine deiminase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4523670 4524122 . + . ID=gene-PUW38_21915;Name=PUW38_21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21915 CP118116.1 Protein Homology CDS 4523670 4524122 . + 0 ID=cds-WJG81182.1;Parent=gene-PUW38_21915;Dbxref=NCBI_GP:WJG81182.1;Name=WJG81182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=PUW38_21915;product=YhcH/YjgK/YiaL family protein;protein_id=WJG81182.1;transl_table=11 CP118116.1 Genbank gene 4524196 4525200 . - . ID=gene-PUW38_21920;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PUW38_21920 CP118116.1 Protein Homology CDS 4524196 4525200 . - 0 ID=cds-WJG81183.1;Parent=gene-PUW38_21920;Dbxref=NCBI_GP:WJG81183.1;Name=WJG81183.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=PUW38_21920;product=ornithine carbamoyltransferase;protein_id=WJG81183.1;transl_table=11 CP118116.1 Genbank gene 4525366 4525782 . + . ID=gene-PUW38_21925;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=PUW38_21925 CP118116.1 Protein Homology CDS 4525366 4525782 . + 0 ID=cds-WJG81184.1;Parent=gene-PUW38_21925;Dbxref=NCBI_GP:WJG81184.1;Name=WJG81184.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=PUW38_21925;product=ribonuclease E inhibitor RraB;protein_id=WJG81184.1;transl_table=11 CP118116.1 Genbank gene 4525794 4526606 . + . ID=gene-PUW38_21930;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=PUW38_21930 CP118116.1 Protein Homology CDS 4525794 4526606 . + 0 ID=cds-WJG81185.1;Parent=gene-PUW38_21930;Dbxref=NCBI_GP:WJG81185.1;Name=WJG81185.1;gbkey=CDS;gene=miaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=PUW38_21930;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WJG81185.1;transl_table=11 CP118116.1 Genbank gene 4526840 4527328 . - . ID=gene-PUW38_21935;Name=PUW38_21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21935 CP118116.1 Protein Homology CDS 4526840 4527328 . - 0 ID=cds-WJG81186.1;Parent=gene-PUW38_21935;Dbxref=NCBI_GP:WJG81186.1;Name=WJG81186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=PUW38_21935;product=DUF3617 domain-containing protein;protein_id=WJG81186.1;transl_table=11 CP118116.1 Genbank gene 4527435 4527938 . - . ID=gene-PUW38_21940;Name=PUW38_21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21940 CP118116.1 Protein Homology CDS 4527435 4527938 . - 0 ID=cds-WJG81187.1;Parent=gene-PUW38_21940;Dbxref=NCBI_GP:WJG81187.1;Name=WJG81187.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=PUW38_21940;product=GNAT family N-acetyltransferase;protein_id=WJG81187.1;transl_table=11 CP118116.1 Genbank gene 4528133 4529320 . + . ID=gene-PUW38_21945;Name=PUW38_21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21945 CP118116.1 Protein Homology CDS 4528133 4529320 . + 0 ID=cds-WJG81188.1;Parent=gene-PUW38_21945;Dbxref=NCBI_GP:WJG81188.1;Name=WJG81188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=PUW38_21945;product=YjgN family protein;protein_id=WJG81188.1;transl_table=11 CP118116.1 Genbank gene 4529462 4532317 . - . ID=gene-PUW38_21950;Name=PUW38_21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21950 CP118116.1 Protein Homology CDS 4529462 4532317 . - 0 ID=cds-WJG81189.1;Parent=gene-PUW38_21950;Dbxref=NCBI_GP:WJG81189.1;Name=WJG81189.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=PUW38_21950;product=valine--tRNA ligase;protein_id=WJG81189.1;transl_table=11 CP118116.1 Genbank gene 4532317 4532760 . - . ID=gene-PUW38_21955;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=PUW38_21955 CP118116.1 Protein Homology CDS 4532317 4532760 . - 0 ID=cds-WJG83311.1;Parent=gene-PUW38_21955;Dbxref=NCBI_GP:WJG83311.1;Name=WJG83311.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=PUW38_21955;product=DNA polymerase III subunit chi;protein_id=WJG83311.1;transl_table=11 CP118116.1 Genbank gene 4532897 4534408 . - . ID=gene-PUW38_21960;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=PUW38_21960 CP118116.1 Protein Homology CDS 4532897 4534408 . - 0 ID=cds-WJG81190.1;Parent=gene-PUW38_21960;Dbxref=NCBI_GP:WJG81190.1;Name=WJG81190.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=PUW38_21960;product=leucyl aminopeptidase;protein_id=WJG81190.1;transl_table=11 CP118116.1 Genbank gene 4534633 4534683 . + . ID=gene-PUW38_21965;Name=PUW38_21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21965 CP118116.1 Protein Homology CDS 4534633 4534683 . + 0 ID=cds-WJG83312.1;Parent=gene-PUW38_21965;Dbxref=NCBI_GP:WJG83312.1;Name=WJG83312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=PUW38_21965;product=hypothetical protein;protein_id=WJG83312.1;transl_table=11 CP118116.1 Genbank gene 4534746 4535846 . + . ID=gene-PUW38_21970;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=PUW38_21970 CP118116.1 Protein Homology CDS 4534746 4535846 . + 0 ID=cds-WJG81191.1;Parent=gene-PUW38_21970;Dbxref=NCBI_GP:WJG81191.1;Name=WJG81191.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=PUW38_21970;product=LPS export ABC transporter permease LptF;protein_id=WJG81191.1;transl_table=11 CP118116.1 Genbank pseudogene 4535846 4536927 . + . ID=gene-PUW38_21975;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=pseudogene;locus_tag=PUW38_21975;pseudo=true CP118116.1 Protein Homology CDS 4535846 4536927 . + 0 ID=cds-PUW38_21975;Parent=gene-PUW38_21975;Note=frameshifted;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=PUW38_21975;product=LPS export ABC transporter permease LptG;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4537133 4538131 . - . ID=gene-PUW38_21980;Name=PUW38_21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_21980 CP118116.1 Protein Homology CDS 4537133 4538131 . - 0 ID=cds-WJG81192.1;Parent=gene-PUW38_21980;Dbxref=NCBI_GP:WJG81192.1;Name=WJG81192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=PUW38_21980;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG81192.1;transl_table=11 CP118116.1 Genbank pseudogene 4538195 4539513 . - . ID=gene-PUW38_21985;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=pseudogene;locus_tag=PUW38_21985;pseudo=true CP118116.1 Protein Homology CDS 4538195 4539513 . - 0 ID=cds-PUW38_21985;Parent=gene-PUW38_21985;Note=frameshifted;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=PUW38_21985;product=gnt-II system L-idonate transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4539575 4540339 . - . ID=gene-PUW38_21990;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=PUW38_21990 CP118116.1 Protein Homology CDS 4539575 4540339 . - 0 ID=cds-WJG81193.1;Parent=gene-PUW38_21990;Dbxref=NCBI_GP:WJG81193.1;Name=WJG81193.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=PUW38_21990;product=gluconate 5-dehydrogenase;protein_id=WJG81193.1;transl_table=11 CP118116.1 Genbank gene 4540364 4541395 . - . ID=gene-PUW38_21995;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=PUW38_21995 CP118116.1 Protein Homology CDS 4540364 4541395 . - 0 ID=cds-WJG81194.1;Parent=gene-PUW38_21995;Dbxref=NCBI_GP:WJG81194.1;Name=WJG81194.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=PUW38_21995;product=L-idonate 5-dehydrogenase;protein_id=WJG81194.1;transl_table=11 CP118116.1 Genbank gene 4541612 4542142 . + . ID=gene-PUW38_22000;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=PUW38_22000 CP118116.1 Protein Homology CDS 4541612 4542142 . + 0 ID=cds-WJG81195.1;Parent=gene-PUW38_22000;Dbxref=NCBI_GP:WJG81195.1;Name=WJG81195.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=PUW38_22000;product=gluconokinase;protein_id=WJG81195.1;transl_table=11 CP118116.1 Genbank gene 4542170 4543189 . - . ID=gene-PUW38_22005;Name=PUW38_22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22005 CP118116.1 Protein Homology CDS 4542170 4543189 . - 0 ID=cds-WJG81196.1;Parent=gene-PUW38_22005;Dbxref=NCBI_GP:WJG81196.1;Name=WJG81196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=PUW38_22005;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WJG81196.1;transl_table=11 CP118116.1 Genbank gene 4543412 4543496 . + . ID=gene-PUW38_22010;Name=PUW38_22010;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_22010 CP118116.1 tRNAscan-SE tRNA 4543412 4543496 . + . ID=rna-PUW38_22010;Parent=gene-PUW38_22010;anticodon=(pos:4543446..4543448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_22010;product=tRNA-Leu CP118116.1 tRNAscan-SE exon 4543412 4543496 . + . ID=exon-PUW38_22010-1;Parent=rna-PUW38_22010;anticodon=(pos:4543446..4543448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_22010;product=tRNA-Leu CP118116.1 Genbank gene 4543945 4544490 . + . ID=gene-PUW38_22015;Name=PUW38_22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22015 CP118116.1 Protein Homology CDS 4543945 4544490 . + 0 ID=cds-WJG83313.1;Parent=gene-PUW38_22015;Dbxref=NCBI_GP:WJG83313.1;Name=WJG83313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=PUW38_22015;product=helix-turn-helix domain-containing protein;protein_id=WJG83313.1;transl_table=11 CP118116.1 Genbank gene 4544567 4544815 . + . ID=gene-PUW38_22020;Name=PUW38_22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22020 CP118116.1 Protein Homology CDS 4544567 4544815 . + 0 ID=cds-WJG81197.1;Parent=gene-PUW38_22020;Dbxref=NCBI_GP:WJG81197.1;Name=WJG81197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168389.1;locus_tag=PUW38_22020;product=ribbon-helix-helix domain-containing protein;protein_id=WJG81197.1;transl_table=11 CP118116.1 Genbank gene 4544924 4545163 . + . ID=gene-PUW38_22025;Name=PUW38_22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22025 CP118116.1 Protein Homology CDS 4544924 4545163 . + 0 ID=cds-WJG81198.1;Parent=gene-PUW38_22025;Dbxref=NCBI_GP:WJG81198.1;Name=WJG81198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=PUW38_22025;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WJG81198.1;transl_table=11 CP118116.1 Genbank gene 4545166 4545474 . + . ID=gene-PUW38_22030;Name=PUW38_22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22030 CP118116.1 Protein Homology CDS 4545166 4545474 . + 0 ID=cds-WJG81199.1;Parent=gene-PUW38_22030;Dbxref=NCBI_GP:WJG81199.1;Name=WJG81199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=PUW38_22030;product=CcdB family protein;protein_id=WJG81199.1;transl_table=11 CP118116.1 Genbank pseudogene 4545880 4546020 . + . ID=gene-PUW38_22035;Name=PUW38_22035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22035;pseudo=true CP118116.1 Protein Homology CDS 4545880 4546020 . + 0 ID=cds-PUW38_22035;Parent=gene-PUW38_22035;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322911.1;locus_tag=PUW38_22035;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4546052 4547185 . - . ID=gene-PUW38_22040;Name=PUW38_22040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22040;pseudo=true CP118116.1 Protein Homology CDS 4546052 4547185 . - 0 ID=cds-PUW38_22040;Parent=gene-PUW38_22040;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW38_22040;product=IS3 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4547540 4548037 . + . ID=gene-PUW38_22045;Name=sefA;gbkey=Gene;gene=sefA;gene_biotype=protein_coding;locus_tag=PUW38_22045 CP118116.1 Protein Homology CDS 4547540 4548037 . + 0 ID=cds-WJG81200.1;Parent=gene-PUW38_22045;Dbxref=NCBI_GP:WJG81200.1;Name=WJG81200.1;gbkey=CDS;gene=sefA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674837.1;locus_tag=PUW38_22045;product=SEF14 fimbria major subunit SefA;protein_id=WJG81200.1;transl_table=11 CP118116.1 Genbank gene 4548159 4548899 . + . ID=gene-PUW38_22050;Name=sefB;gbkey=Gene;gene=sefB;gene_biotype=protein_coding;locus_tag=PUW38_22050 CP118116.1 Protein Homology CDS 4548159 4548899 . + 0 ID=cds-WJG81201.1;Parent=gene-PUW38_22050;Dbxref=NCBI_GP:WJG81201.1;Name=WJG81201.1;gbkey=CDS;gene=sefB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746655.1;locus_tag=PUW38_22050;product=SEF14/SEF18 fimbria chaperone SefB;protein_id=WJG81201.1;transl_table=11 CP118116.1 Genbank pseudogene 4548916 4551014 . + . ID=gene-PUW38_22055;Name=PUW38_22055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22055;pseudo=true CP118116.1 Protein Homology CDS 4548916 4551014 . + 0 ID=cds-PUW38_22055;Parent=gene-PUW38_22055;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF025320.2;locus_tag=PUW38_22055;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4551090 4551317 . + . ID=gene-PUW38_22060;Name=PUW38_22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22060 CP118116.1 Protein Homology CDS 4551090 4551317 . + 0 ID=cds-WJG81202.1;Parent=gene-PUW38_22060;Dbxref=NCBI_GP:WJG81202.1;Name=WJG81202.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025319.2;locus_tag=PUW38_22060;product=FimD/PapC C-terminal domain-containing protein;protein_id=WJG81202.1;transl_table=11 CP118116.1 Genbank gene 4551357 4551572 . + . ID=gene-PUW38_22065;Name=PUW38_22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22065 CP118116.1 GeneMarkS-2+ CDS 4551357 4551572 . + 0 ID=cds-WJG81203.1;Parent=gene-PUW38_22065;Dbxref=NCBI_GP:WJG81203.1;Name=WJG81203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_22065;product=hypothetical protein;protein_id=WJG81203.1;transl_table=11 CP118116.1 Genbank gene 4551605 4551802 . + . ID=gene-PUW38_22070;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=PUW38_22070 CP118116.1 Protein Homology CDS 4551605 4551802 . + 0 ID=cds-WJG83314.1;Parent=gene-PUW38_22070;Dbxref=NCBI_GP:WJG83314.1;Name=WJG83314.1;gbkey=CDS;gene=afaD;inference=COORDINATES: protein motif:HMM:NF017581.2;locus_tag=PUW38_22070;product=AfaD family invasin;protein_id=WJG83314.1;transl_table=11 CP118116.1 Genbank gene 4551836 4552651 . - . ID=gene-PUW38_22075;Name=PUW38_22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22075 CP118116.1 Protein Homology CDS 4551836 4552651 . - 0 ID=cds-WJG81204.1;Parent=gene-PUW38_22075;Dbxref=NCBI_GP:WJG81204.1;Name=WJG81204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723051.1;locus_tag=PUW38_22075;product=helix-turn-helix transcriptional regulator;protein_id=WJG81204.1;transl_table=11 CP118116.1 Genbank gene 4553228 4553437 . + . ID=gene-PUW38_22080;Name=pefI;gbkey=Gene;gene=pefI;gene_biotype=protein_coding;locus_tag=PUW38_22080 CP118116.1 Protein Homology CDS 4553228 4553437 . + 0 ID=cds-WJG81205.1;Parent=gene-PUW38_22080;Dbxref=NCBI_GP:WJG81205.1;Name=WJG81205.1;gbkey=CDS;gene=pefI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490505.1;locus_tag=PUW38_22080;product=transcriptional regulator PefI;protein_id=WJG81205.1;transl_table=11 CP118116.1 Genbank gene 4553422 4553772 . + . ID=gene-PUW38_22085;Name=PUW38_22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22085 CP118116.1 Protein Homology CDS 4553422 4553772 . + 0 ID=cds-WJG81206.1;Parent=gene-PUW38_22085;Dbxref=NCBI_GP:WJG81206.1;Name=WJG81206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490504.1;locus_tag=PUW38_22085;product=helix-turn-helix transcriptional regulator;protein_id=WJG81206.1;transl_table=11 CP118116.1 Genbank gene 4554017 4554670 . + . ID=gene-PUW38_22090;Name=PUW38_22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22090 CP118116.1 Protein Homology CDS 4554017 4554670 . + 0 ID=cds-WJG81207.1;Parent=gene-PUW38_22090;Dbxref=NCBI_GP:WJG81207.1;Name=WJG81207.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490503.1;locus_tag=PUW38_22090;product=DsbA family protein;protein_id=WJG81207.1;transl_table=11 CP118116.1 Genbank gene 4554660 4554806 . + . ID=gene-PUW38_22095;Name=PUW38_22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22095 CP118116.1 Protein Homology CDS 4554660 4554806 . + 0 ID=cds-WJG81208.1;Parent=gene-PUW38_22095;Dbxref=NCBI_GP:WJG81208.1;Name=WJG81208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141719.1;locus_tag=PUW38_22095;product=hypothetical protein;protein_id=WJG81208.1;transl_table=11 CP118116.1 Genbank gene 4554857 4555702 . + . ID=gene-PUW38_22100;Name=PUW38_22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22100 CP118116.1 Protein Homology CDS 4554857 4555702 . + 0 ID=cds-WJG81209.1;Parent=gene-PUW38_22100;Dbxref=NCBI_GP:WJG81209.1;Name=WJG81209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526839.1;locus_tag=PUW38_22100;product=YjiK family protein;protein_id=WJG81209.1;transl_table=11 CP118116.1 Genbank pseudogene 4555965 4557075 . + . ID=gene-PUW38_22105;Name=PUW38_22105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22105;pseudo=true CP118116.1 Protein Homology CDS 4555965 4557075 . + 0 ID=cds-PUW38_22105;Parent=gene-PUW38_22105;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=PUW38_22105;product=IS3 family transposase;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4557331 4558206 . + . ID=gene-PUW38_22110;Name=PUW38_22110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22110;pseudo=true CP118116.1 Protein Homology CDS 4557331 4558206 . + 0 ID=cds-PUW38_22110;Parent=gene-PUW38_22110;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=PUW38_22110;product=HNH endonuclease;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4558686 4559402 . - . ID=gene-PUW38_22115;Name=PUW38_22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22115 CP118116.1 Protein Homology CDS 4558686 4559402 . - 0 ID=cds-WJG81210.1;Parent=gene-PUW38_22115;Dbxref=NCBI_GP:WJG81210.1;Name=WJG81210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=PUW38_22115;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WJG81210.1;transl_table=11 CP118116.1 Genbank gene 4559962 4561593 . - . ID=gene-PUW38_22120;Name=PUW38_22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22120 CP118116.1 Protein Homology CDS 4559962 4561593 . - 0 ID=cds-WJG81211.1;Parent=gene-PUW38_22120;Dbxref=NCBI_GP:WJG81211.1;Name=WJG81211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=PUW38_22120;product=class I SAM-dependent methyltransferase;protein_id=WJG81211.1;transl_table=11 CP118116.1 Genbank gene 4561598 4561855 . - . ID=gene-PUW38_22125;Name=PUW38_22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22125 CP118116.1 Protein Homology CDS 4561598 4561855 . - 0 ID=cds-WJG81212.1;Parent=gene-PUW38_22125;Dbxref=NCBI_GP:WJG81212.1;Name=WJG81212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=PUW38_22125;product=YjhX family toxin;protein_id=WJG81212.1;transl_table=11 CP118116.1 Genbank gene 4562343 4562951 . + . ID=gene-PUW38_22130;Name=PUW38_22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22130 CP118116.1 Protein Homology CDS 4562343 4562951 . + 0 ID=cds-WJG81213.1;Parent=gene-PUW38_22130;Dbxref=NCBI_GP:WJG81213.1;Name=WJG81213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=PUW38_22130;product=DUF1062 domain-containing protein;protein_id=WJG81213.1;transl_table=11 CP118116.1 Genbank pseudogene 4563303 4564189 . + . ID=gene-PUW38_22135;Name=PUW38_22135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22135;pseudo=true CP118116.1 Protein Homology CDS 4563303 4564189 . + 0 ID=cds-PUW38_22135;Parent=gene-PUW38_22135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=PUW38_22135;product=hypothetical protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4564436 4564855 . + . ID=gene-PUW38_22140;Name=PUW38_22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22140 CP118116.1 Protein Homology CDS 4564436 4564855 . + 0 ID=cds-WJG81214.1;Parent=gene-PUW38_22140;Dbxref=NCBI_GP:WJG81214.1;Name=WJG81214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=PUW38_22140;product=DUF302 domain-containing protein;protein_id=WJG81214.1;transl_table=11 CP118116.1 Genbank gene 4564872 4565537 . - . ID=gene-PUW38_22145;Name=PUW38_22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22145 CP118116.1 Protein Homology CDS 4564872 4565537 . - 0 ID=cds-WJG81215.1;Parent=gene-PUW38_22145;Dbxref=NCBI_GP:WJG81215.1;Name=WJG81215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588696.1;locus_tag=PUW38_22145;product=dienelactone hydrolase family protein;protein_id=WJG81215.1;transl_table=11 CP118116.1 Genbank gene 4565887 4566660 . + . ID=gene-PUW38_22150;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=PUW38_22150 CP118116.1 Protein Homology CDS 4565887 4566660 . + 0 ID=cds-WJG81216.1;Parent=gene-PUW38_22150;Dbxref=NCBI_GP:WJG81216.1;Name=WJG81216.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=PUW38_22150;product=Uxu operon transcriptional regulator;protein_id=WJG81216.1;transl_table=11 CP118116.1 Genbank gene 4566661 4567674 . - . ID=gene-PUW38_22155;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PUW38_22155 CP118116.1 Protein Homology CDS 4566661 4567674 . - 0 ID=cds-WJG81217.1;Parent=gene-PUW38_22155;Dbxref=NCBI_GP:WJG81217.1;Name=WJG81217.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=PUW38_22155;product=tryptophan--tRNA ligase;protein_id=WJG81217.1;transl_table=11 CP118116.1 Genbank gene 4568387 4568917 . + . ID=gene-PUW38_22160;Name=PUW38_22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22160 CP118116.1 Protein Homology CDS 4568387 4568917 . + 0 ID=cds-WJG81218.1;Parent=gene-PUW38_22160;Dbxref=NCBI_GP:WJG81218.1;Name=WJG81218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=PUW38_22160;product=Hcp family type VI secretion system effector;protein_id=WJG81218.1;transl_table=11 CP118116.1 Genbank pseudogene 4569156 4569891 . + . ID=gene-PUW38_22165;Name=PUW38_22165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22165;pseudo=true CP118116.1 Protein Homology CDS 4569156 4569891 . + 0 ID=cds-PUW38_22165;Parent=gene-PUW38_22165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=PUW38_22165;product=aspartate/glutamate racemase family protein;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4569897 4570805 . - . ID=gene-PUW38_22170;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=PUW38_22170 CP118116.1 Protein Homology CDS 4569897 4570805 . - 0 ID=cds-WJG81219.1;Parent=gene-PUW38_22170;Dbxref=NCBI_GP:WJG81219.1;Name=WJG81219.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=PUW38_22170;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WJG81219.1;transl_table=11 CP118116.1 Genbank gene 4570924 4572096 . - . ID=gene-PUW38_22175;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=PUW38_22175 CP118116.1 Protein Homology CDS 4570924 4572096 . - 0 ID=cds-WJG81220.1;Parent=gene-PUW38_22175;Dbxref=NCBI_GP:WJG81220.1;Name=WJG81220.1;Ontology_term=GO:0006508,GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=PUW38_22175;product=beta-aspartyl-peptidase;protein_id=WJG81220.1;transl_table=11 CP118116.1 Genbank gene 4572109 4572570 . - . ID=gene-PUW38_22180;Name=PUW38_22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22180 CP118116.1 Protein Homology CDS 4572109 4572570 . - 0 ID=cds-WJG81221.1;Parent=gene-PUW38_22180;Dbxref=NCBI_GP:WJG81221.1;Name=WJG81221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=PUW38_22180;product=YjiG family protein;protein_id=WJG81221.1;transl_table=11 CP118116.1 Genbank gene 4572567 4573238 . - . ID=gene-PUW38_22185;Name=PUW38_22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22185 CP118116.1 Protein Homology CDS 4572567 4573238 . - 0 ID=cds-WJG81222.1;Parent=gene-PUW38_22185;Dbxref=NCBI_GP:WJG81222.1;Name=WJG81222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068748.1;locus_tag=PUW38_22185;product=nucleoside recognition domain-containing protein;protein_id=WJG81222.1;transl_table=11 CP118116.1 Genbank pseudogene 4574111 4575294 . - . ID=gene-PUW38_22190;Name=PUW38_22190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22190;pseudo=true CP118116.1 Protein Homology CDS 4574111 4575294 . - 0 ID=cds-PUW38_22190;Parent=gene-PUW38_22190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=PUW38_22190;product=MFS transporter;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4575514 4576785 . - . ID=gene-PUW38_22195;Name=PUW38_22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22195 CP118116.1 Protein Homology CDS 4575514 4576785 . - 0 ID=cds-WJG81223.1;Parent=gene-PUW38_22195;Dbxref=NCBI_GP:WJG81223.1;Name=WJG81223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=PUW38_22195;product=DUF445 domain-containing protein;protein_id=WJG81223.1;transl_table=11 CP118116.1 Genbank gene 4576872 4578113 . - . ID=gene-PUW38_22200;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=PUW38_22200 CP118116.1 Protein Homology CDS 4576872 4578113 . - 0 ID=cds-WJG81224.1;Parent=gene-PUW38_22200;Dbxref=NCBI_GP:WJG81224.1;Name=WJG81224.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=PUW38_22200;product=multidrug efflux MFS transporter MdtM;protein_id=WJG81224.1;transl_table=11 CP118116.1 Genbank gene 4578592 4579545 . + . ID=gene-PUW38_22205;Name=PUW38_22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22205 CP118116.1 Protein Homology CDS 4578592 4579545 . + 0 ID=cds-WJG81225.1;Parent=gene-PUW38_22205;Dbxref=NCBI_GP:WJG81225.1;Name=WJG81225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=PUW38_22205;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG81225.1;transl_table=11 CP118116.1 Genbank pseudogene 4579726 4580169 . + . ID=gene-PUW38_22210;Name=PUW38_22210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22210;pseudo=true CP118116.1 Protein Homology CDS 4579726 4580169 . + 0 ID=cds-PUW38_22210;Parent=gene-PUW38_22210;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=PUW38_22210;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 CP118116.1 Genbank pseudogene 4580128 4581369 . - . ID=gene-PUW38_22215;Name=PUW38_22215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22215;pseudo=true CP118116.1 Protein Homology CDS 4580128 4581369 . - 0 ID=cds-PUW38_22215;Parent=gene-PUW38_22215;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461652.1;locus_tag=PUW38_22215;product=type I restriction endonuclease;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4581464 4582768 . - . ID=gene-PUW38_22220;Name=PUW38_22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22220 CP118116.1 Protein Homology CDS 4581464 4582768 . - 0 ID=cds-WJG81226.1;Parent=gene-PUW38_22220;Dbxref=NCBI_GP:WJG81226.1;Name=WJG81226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863532.1;locus_tag=PUW38_22220;product=type I restriction-modification protein specificity subunit;protein_id=WJG81226.1;transl_table=11 CP118116.1 Genbank gene 4582758 4584377 . - . ID=gene-PUW38_22225;Name=PUW38_22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22225 CP118116.1 Protein Homology CDS 4582758 4584377 . - 0 ID=cds-WJG81227.1;Parent=gene-PUW38_22225;Dbxref=NCBI_GP:WJG81227.1;Name=WJG81227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238256.1;locus_tag=PUW38_22225;product=class I SAM-dependent DNA methyltransferase;protein_id=WJG81227.1;transl_table=11 CP118116.1 Genbank pseudogene 4584441 4585607 . - . ID=gene-PUW38_22230;Name=PUW38_22230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22230;pseudo=true CP118116.1 Protein Homology CDS 4584441 4585607 . - 0 ID=cds-PUW38_22230;Parent=gene-PUW38_22230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800831.1;locus_tag=PUW38_22230;product=restriction endonuclease;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4585732 4585866 . + . ID=gene-PUW38_22235;Name=PUW38_22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22235 CP118116.1 Protein Homology CDS 4585732 4585866 . + 0 ID=cds-WJG81228.1;Parent=gene-PUW38_22235;Dbxref=NCBI_GP:WJG81228.1;Name=WJG81228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055725.1;locus_tag=PUW38_22235;product=hypothetical protein;protein_id=WJG81228.1;transl_table=11 CP118116.1 Genbank gene 4585898 4586644 . - . ID=gene-PUW38_22240;Name=PUW38_22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22240 CP118116.1 Protein Homology CDS 4585898 4586644 . - 0 ID=cds-WJG83315.1;Parent=gene-PUW38_22240;Dbxref=NCBI_GP:WJG83315.1;Name=WJG83315.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=PUW38_22240;product=N-6 DNA methylase;protein_id=WJG83315.1;transl_table=11 CP118116.1 Genbank gene 4587154 4587729 . - . ID=gene-PUW38_22245;Name=PUW38_22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22245 CP118116.1 Protein Homology CDS 4587154 4587729 . - 0 ID=cds-WJG83316.1;Parent=gene-PUW38_22245;Dbxref=NCBI_GP:WJG83316.1;Name=WJG83316.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539933.1;locus_tag=PUW38_22245;product=restriction endonuclease subunit S;protein_id=WJG83316.1;transl_table=11 CP118116.1 Genbank gene 4588342 4590183 . - . ID=gene-PUW38_22250;Name=PUW38_22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22250 CP118116.1 Protein Homology CDS 4588342 4590183 . - 0 ID=cds-WJG81229.1;Parent=gene-PUW38_22250;Dbxref=NCBI_GP:WJG81229.1;Name=WJG81229.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974638.1;locus_tag=PUW38_22250;product=3'-5' exonuclease;protein_id=WJG81229.1;transl_table=11 CP118116.1 Genbank gene 4590586 4590873 . + . ID=gene-PUW38_22255;Name=PUW38_22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22255 CP118116.1 Protein Homology CDS 4590586 4590873 . + 0 ID=cds-WJG81230.1;Parent=gene-PUW38_22255;Dbxref=NCBI_GP:WJG81230.1;Name=WJG81230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=PUW38_22255;product=BrnT family toxin;protein_id=WJG81230.1;transl_table=11 CP118116.1 Genbank gene 4590860 4591162 . + . ID=gene-PUW38_22260;Name=PUW38_22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22260 CP118116.1 Protein Homology CDS 4590860 4591162 . + 0 ID=cds-WJG81231.1;Parent=gene-PUW38_22260;Dbxref=NCBI_GP:WJG81231.1;Name=WJG81231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=PUW38_22260;product=BrnA antitoxin family protein;protein_id=WJG81231.1;transl_table=11 CP118116.1 Genbank gene 4591237 4592193 . - . ID=gene-PUW38_22265;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=PUW38_22265 CP118116.1 Protein Homology CDS 4591237 4592193 . - 0 ID=cds-WJG81232.1;Parent=gene-PUW38_22265;Dbxref=NCBI_GP:WJG81232.1;Name=WJG81232.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=PUW38_22265;product=GTPase;protein_id=WJG81232.1;transl_table=11 CP118116.1 Genbank gene 4592204 4592407 . - . ID=gene-PUW38_22270;Name=PUW38_22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22270 CP118116.1 Protein Homology CDS 4592204 4592407 . - 0 ID=cds-WJG81233.1;Parent=gene-PUW38_22270;Dbxref=NCBI_GP:WJG81233.1;Name=WJG81233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=PUW38_22270;product=YbdD/YjiX family protein;protein_id=WJG81233.1;transl_table=11 CP118116.1 Genbank gene 4592502 4594652 . - . ID=gene-PUW38_22275;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=PUW38_22275 CP118116.1 Protein Homology CDS 4592502 4594652 . - 0 ID=cds-WJG81234.1;Parent=gene-PUW38_22275;Dbxref=NCBI_GP:WJG81234.1;Name=WJG81234.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=PUW38_22275;product=pyruvate/proton symporter BtsT;protein_id=WJG81234.1;transl_table=11 CP118116.1 Genbank gene 4595019 4596680 . + . ID=gene-PUW38_22280;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=PUW38_22280 CP118116.1 Protein Homology CDS 4595019 4596680 . + 0 ID=cds-WJG81235.1;Parent=gene-PUW38_22280;Dbxref=NCBI_GP:WJG81235.1;Name=WJG81235.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=PUW38_22280;product=methyl-accepting chemotaxis protein;protein_id=WJG81235.1;transl_table=11 CP118116.1 Genbank gene 4597003 4599768 . + . ID=gene-PUW38_22285;Name=PUW38_22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22285 CP118116.1 Protein Homology CDS 4597003 4599768 . + 0 ID=cds-WJG81236.1;Parent=gene-PUW38_22285;Dbxref=NCBI_GP:WJG81236.1;Name=WJG81236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=PUW38_22285;product=sigma-54-dependent transcriptional regulator;protein_id=WJG81236.1;transl_table=11 CP118116.1 Genbank gene 4599870 4600292 . + . ID=gene-PUW38_22290;Name=PUW38_22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22290 CP118116.1 Protein Homology CDS 4599870 4600292 . + 0 ID=cds-WJG81237.1;Parent=gene-PUW38_22290;Dbxref=NCBI_GP:WJG81237.1;Name=WJG81237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=PUW38_22290;product=PTS sugar transporter subunit IIA;protein_id=WJG81237.1;transl_table=11 CP118116.1 Genbank gene 4600307 4600768 . + . ID=gene-PUW38_22295;Name=PUW38_22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22295 CP118116.1 Protein Homology CDS 4600307 4600768 . + 0 ID=cds-WJG81238.1;Parent=gene-PUW38_22295;Dbxref=NCBI_GP:WJG81238.1;Name=WJG81238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=PUW38_22295;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WJG81238.1;transl_table=11 CP118116.1 Genbank gene 4600794 4601573 . + . ID=gene-PUW38_22300;Name=PUW38_22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22300 CP118116.1 Protein Homology CDS 4600794 4601573 . + 0 ID=cds-WJG81239.1;Parent=gene-PUW38_22300;Dbxref=NCBI_GP:WJG81239.1;Name=WJG81239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=PUW38_22300;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WJG81239.1;transl_table=11 CP118116.1 Genbank gene 4601551 4602399 . + . ID=gene-PUW38_22305;Name=PUW38_22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22305 CP118116.1 Protein Homology CDS 4601551 4602399 . + 0 ID=cds-WJG81240.1;Parent=gene-PUW38_22305;Dbxref=NCBI_GP:WJG81240.1;Name=WJG81240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=PUW38_22305;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WJG81240.1;transl_table=11 CP118116.1 Genbank gene 4602412 4603470 . + . ID=gene-PUW38_22310;Name=PUW38_22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22310 CP118116.1 Protein Homology CDS 4602412 4603470 . + 0 ID=cds-WJG81241.1;Parent=gene-PUW38_22310;Dbxref=NCBI_GP:WJG81241.1;Name=WJG81241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=PUW38_22310;product=SIS domain-containing protein;protein_id=WJG81241.1;transl_table=11 CP118116.1 Genbank gene 4603488 4604498 . + . ID=gene-PUW38_22315;Name=PUW38_22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22315 CP118116.1 Protein Homology CDS 4603488 4604498 . + 0 ID=cds-WJG81242.1;Parent=gene-PUW38_22315;Dbxref=NCBI_GP:WJG81242.1;Name=WJG81242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=PUW38_22315;product=SIS domain-containing protein;protein_id=WJG81242.1;transl_table=11 CP118116.1 Genbank pseudogene 4604632 4606922 . - . ID=gene-PUW38_22320;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=pseudogene;locus_tag=PUW38_22320;pseudo=true CP118116.1 Protein Homology CDS 4604632 4606922 . - 0 ID=cds-PUW38_22320;Parent=gene-PUW38_22320;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465680.1;locus_tag=PUW38_22320;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4607205 4607666 . - . ID=gene-PUW38_22325;Name=PUW38_22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22325 CP118116.1 Protein Homology CDS 4607205 4607666 . - 0 ID=cds-WJG81243.1;Parent=gene-PUW38_22325;Dbxref=NCBI_GP:WJG81243.1;Name=WJG81243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=PUW38_22325;product=DUF2501 domain-containing protein;protein_id=WJG81243.1;transl_table=11 CP118116.1 Genbank gene 4607724 4608461 . - . ID=gene-PUW38_22330;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=PUW38_22330 CP118116.1 Protein Homology CDS 4607724 4608461 . - 0 ID=cds-WJG81244.1;Parent=gene-PUW38_22330;Dbxref=NCBI_GP:WJG81244.1;Name=WJG81244.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=PUW38_22330;product=DNA replication protein DnaC;protein_id=WJG81244.1;transl_table=11 CP118116.1 Genbank gene 4608464 4609003 . - . ID=gene-PUW38_22335;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=PUW38_22335 CP118116.1 Protein Homology CDS 4608464 4609003 . - 0 ID=cds-WJG81245.1;Parent=gene-PUW38_22335;Dbxref=NCBI_GP:WJG81245.1;Name=WJG81245.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=PUW38_22335;product=primosomal protein DnaT;protein_id=WJG81245.1;transl_table=11 CP118116.1 Genbank gene 4609096 4609569 . - . ID=gene-PUW38_22340;Name=PUW38_22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22340 CP118116.1 Protein Homology CDS 4609096 4609569 . - 0 ID=cds-WJG81246.1;Parent=gene-PUW38_22340;Dbxref=NCBI_GP:WJG81246.1;Name=WJG81246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=PUW38_22340;product=threonine/serine exporter;protein_id=WJG81246.1;transl_table=11 CP118116.1 Genbank gene 4609560 4610336 . - . ID=gene-PUW38_22345;Name=PUW38_22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22345 CP118116.1 Protein Homology CDS 4609560 4610336 . - 0 ID=cds-WJG81247.1;Parent=gene-PUW38_22345;Dbxref=NCBI_GP:WJG81247.1;Name=WJG81247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=PUW38_22345;product=threonine/serine exporter ThrE family protein;protein_id=WJG81247.1;transl_table=11 CP118116.1 Genbank gene 4611049 4611774 . + . ID=gene-PUW38_22350;Name=PUW38_22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22350 CP118116.1 Protein Homology CDS 4611049 4611774 . + 0 ID=cds-WJG81248.1;Parent=gene-PUW38_22350;Dbxref=NCBI_GP:WJG81248.1;Name=WJG81248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=PUW38_22350;product=response regulator transcription factor;protein_id=WJG81248.1;transl_table=11 CP118116.1 Genbank gene 4611735 4612409 . + . ID=gene-PUW38_22355;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=PUW38_22355 CP118116.1 Protein Homology CDS 4611735 4612409 . + 0 ID=cds-WJG81249.1;Parent=gene-PUW38_22355;Dbxref=NCBI_GP:WJG81249.1;Name=WJG81249.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=PUW38_22355;product=DNA-binding transcriptional activator BglJ;protein_id=WJG81249.1;transl_table=11 CP118116.1 Genbank gene 4612460 4612918 . - . ID=gene-PUW38_22360;Name=PUW38_22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22360 CP118116.1 Protein Homology CDS 4612460 4612918 . - 0 ID=cds-WJG81250.1;Parent=gene-PUW38_22360;Dbxref=NCBI_GP:WJG81250.1;Name=WJG81250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=PUW38_22360;product=YbaK/EbsC family protein;protein_id=WJG81250.1;transl_table=11 CP118116.1 Genbank gene 4613077 4613865 . - . ID=gene-PUW38_22365;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=PUW38_22365 CP118116.1 Protein Homology CDS 4613077 4613865 . - 0 ID=cds-WJG81251.1;Parent=gene-PUW38_22365;Dbxref=NCBI_GP:WJG81251.1;Name=WJG81251.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=PUW38_22365;product=siderophore-iron reductase FhuF;protein_id=WJG81251.1;transl_table=11 CP118116.1 Genbank gene 4613986 4615050 . - . ID=gene-PUW38_22370;Name=PUW38_22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22370 CP118116.1 Protein Homology CDS 4613986 4615050 . - 0 ID=cds-WJG81252.1;Parent=gene-PUW38_22370;Dbxref=NCBI_GP:WJG81252.1;Name=WJG81252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=PUW38_22370;product=GGDEF domain-containing protein;protein_id=WJG81252.1;transl_table=11 CP118116.1 Genbank gene 4615301 4615537 . + . ID=gene-PUW38_22375;Name=PUW38_22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22375 CP118116.1 Protein Homology CDS 4615301 4615537 . + 0 ID=cds-WJG81253.1;Parent=gene-PUW38_22375;Dbxref=NCBI_GP:WJG81253.1;Name=WJG81253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=PUW38_22375;product=DUF1435 domain-containing protein;protein_id=WJG81253.1;transl_table=11 CP118116.1 Genbank gene 4615569 4615655 . - . ID=gene-PUW38_22380;Name=PUW38_22380;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW38_22380 CP118116.1 tRNAscan-SE tRNA 4615569 4615655 . - . ID=rna-PUW38_22380;Parent=gene-PUW38_22380;anticodon=(pos:complement(4615619..4615621));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_22380;product=tRNA-Leu CP118116.1 tRNAscan-SE exon 4615569 4615655 . - . ID=exon-PUW38_22380-1;Parent=rna-PUW38_22380;anticodon=(pos:complement(4615619..4615621));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW38_22380;product=tRNA-Leu CP118116.1 Genbank gene 4615846 4616874 . - . ID=gene-PUW38_22385;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=PUW38_22385 CP118116.1 Protein Homology CDS 4615846 4616874 . - 0 ID=cds-WJG81254.1;Parent=gene-PUW38_22385;Dbxref=NCBI_GP:WJG81254.1;Name=WJG81254.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=PUW38_22385;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WJG81254.1;transl_table=11 CP118116.1 Genbank gene 4616977 4617414 . + . ID=gene-PUW38_22390;Name=PUW38_22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22390 CP118116.1 Protein Homology CDS 4616977 4617414 . + 0 ID=cds-WJG81255.1;Parent=gene-PUW38_22390;Dbxref=NCBI_GP:WJG81255.1;Name=WJG81255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=PUW38_22390;product=DNA polymerase III subunit psi;protein_id=WJG81255.1;transl_table=11 CP118116.1 Genbank gene 4617359 4617805 . + . ID=gene-PUW38_22395;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=PUW38_22395 CP118116.1 Protein Homology CDS 4617359 4617805 . + 0 ID=cds-WJG81256.1;Parent=gene-PUW38_22395;Dbxref=NCBI_GP:WJG81256.1;Name=WJG81256.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=PUW38_22395;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WJG81256.1;transl_table=11 CP118116.1 Genbank gene 4617827 4618504 . + . ID=gene-PUW38_22400;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=PUW38_22400 CP118116.1 Protein Homology CDS 4617827 4618504 . + 0 ID=cds-WJG83317.1;Parent=gene-PUW38_22400;Dbxref=NCBI_GP:WJG83317.1;Name=WJG83317.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=PUW38_22400;product=pyrimidine 5'-nucleotidase;protein_id=WJG83317.1;transl_table=11 CP118116.1 Genbank gene 4618596 4620185 . + . ID=gene-PUW38_22405;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=PUW38_22405 CP118116.1 Protein Homology CDS 4618596 4620185 . + 0 ID=cds-WJG81257.1;Parent=gene-PUW38_22405;Dbxref=NCBI_GP:WJG81257.1;Name=WJG81257.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=PUW38_22405;product=peptide chain release factor 3;protein_id=WJG81257.1;transl_table=11 CP118116.1 Genbank gene 4620587 4621204 . + . ID=gene-PUW38_22410;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PUW38_22410 CP118116.1 Protein Homology CDS 4620587 4621204 . + 0 ID=cds-WJG81258.1;Parent=gene-PUW38_22410;Dbxref=NCBI_GP:WJG81258.1;Name=WJG81258.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=PUW38_22410;product=molecular chaperone OsmY;protein_id=WJG81258.1;transl_table=11 CP118116.1 Genbank gene 4621333 4621494 . + . ID=gene-PUW38_22415;Name=PUW38_22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22415 CP118116.1 Protein Homology CDS 4621333 4621494 . + 0 ID=cds-WJG81259.1;Parent=gene-PUW38_22415;Dbxref=NCBI_GP:WJG81259.1;Name=WJG81259.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=PUW38_22415;product=DUF1328 domain-containing protein;protein_id=WJG81259.1;transl_table=11 CP118116.1 Genbank gene 4621618 4622691 . + . ID=gene-PUW38_22420;Name=PUW38_22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22420 CP118116.1 Protein Homology CDS 4621618 4622691 . + 0 ID=cds-WJG83318.1;Parent=gene-PUW38_22420;Dbxref=NCBI_GP:WJG83318.1;Name=WJG83318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=PUW38_22420;product=patatin family protein;protein_id=WJG83318.1;transl_table=11 CP118116.1 Genbank gene 4622688 4623461 . + . ID=gene-PUW38_22425;Name=PUW38_22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22425 CP118116.1 Protein Homology CDS 4622688 4623461 . + 0 ID=cds-WJG81260.1;Parent=gene-PUW38_22425;Dbxref=NCBI_GP:WJG81260.1;Name=WJG81260.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=PUW38_22425;product=metal-dependent hydrolase;protein_id=WJG81260.1;transl_table=11 CP118116.1 Genbank gene 4623494 4624357 . - . ID=gene-PUW38_22430;Name=PUW38_22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22430 CP118116.1 Protein Homology CDS 4623494 4624357 . - 0 ID=cds-WJG81261.1;Parent=gene-PUW38_22430;Dbxref=NCBI_GP:WJG81261.1;Name=WJG81261.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=PUW38_22430;product=YjjW family glycine radical enzyme activase;protein_id=WJG81261.1;transl_table=11 CP118116.1 Genbank gene 4624329 4625879 . - . ID=gene-PUW38_22435;Name=PUW38_22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22435 CP118116.1 Protein Homology CDS 4624329 4625879 . - 0 ID=cds-WJG81262.1;Parent=gene-PUW38_22435;Dbxref=NCBI_GP:WJG81262.1;Name=WJG81262.1;Ontology_term=GO:0008150,GO:0003824,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=PUW38_22435;product=YjjI family glycine radical enzyme;protein_id=WJG81262.1;transl_table=11 CP118116.1 Genbank gene 4626139 4626918 . + . ID=gene-PUW38_22440;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=PUW38_22440 CP118116.1 Protein Homology CDS 4626139 4626918 . + 0 ID=cds-WJG81263.1;Parent=gene-PUW38_22440;Dbxref=NCBI_GP:WJG81263.1;Name=WJG81263.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=PUW38_22440;product=deoxyribose-phosphate aldolase;protein_id=WJG81263.1;transl_table=11 CP118116.1 Genbank gene 4627042 4628364 . + . ID=gene-PUW38_22445;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=PUW38_22445 CP118116.1 Protein Homology CDS 4627042 4628364 . + 0 ID=cds-WJG81264.1;Parent=gene-PUW38_22445;Dbxref=NCBI_GP:WJG81264.1;Name=WJG81264.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=PUW38_22445;product=thymidine phosphorylase;protein_id=WJG81264.1;transl_table=11 CP118116.1 Genbank gene 4628416 4629639 . + . ID=gene-PUW38_22450;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=PUW38_22450 CP118116.1 Protein Homology CDS 4628416 4629639 . + 0 ID=cds-WJG81265.1;Parent=gene-PUW38_22450;Dbxref=NCBI_GP:WJG81265.1;Name=WJG81265.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=PUW38_22450;product=phosphopentomutase;protein_id=WJG81265.1;transl_table=11 CP118116.1 Genbank gene 4629849 4630568 . + . ID=gene-PUW38_22455;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=PUW38_22455 CP118116.1 Protein Homology CDS 4629849 4630568 . + 0 ID=cds-WJG81266.1;Parent=gene-PUW38_22455;Dbxref=NCBI_GP:WJG81266.1;Name=WJG81266.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=PUW38_22455;product=purine-nucleoside phosphorylase;protein_id=WJG81266.1;transl_table=11 CP118116.1 Genbank pseudogene 4630747 4632068 . + . ID=gene-PUW38_22460;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=pseudogene;locus_tag=PUW38_22460;pseudo=true CP118116.1 Protein Homology CDS 4630747 4632068 . + 0 ID=cds-PUW38_22460;Parent=gene-PUW38_22460;Note=frameshifted;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=PUW38_22460;product=type II toxin-antitoxin system HipA family toxin YjjJ;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4632073 4633089 . - . ID=gene-PUW38_22465;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=PUW38_22465 CP118116.1 Protein Homology CDS 4632073 4633089 . - 0 ID=cds-WJG81267.1;Parent=gene-PUW38_22465;Dbxref=NCBI_GP:WJG81267.1;Name=WJG81267.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=PUW38_22465;product=lipoate--protein ligase LplA;protein_id=WJG81267.1;transl_table=11 CP118116.1 Genbank gene 4633123 4633767 . - . ID=gene-PUW38_22470;Name=PUW38_22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22470 CP118116.1 Protein Homology CDS 4633123 4633767 . - 0 ID=cds-WJG81268.1;Parent=gene-PUW38_22470;Dbxref=NCBI_GP:WJG81268.1;Name=WJG81268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=PUW38_22470;product=YtjB family periplasmic protein;protein_id=WJG81268.1;transl_table=11 CP118116.1 Genbank gene 4633884 4634852 . + . ID=gene-PUW38_22475;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PUW38_22475 CP118116.1 Protein Homology CDS 4633884 4634852 . + 0 ID=cds-WJG81269.1;Parent=gene-PUW38_22475;Dbxref=NCBI_GP:WJG81269.1;Name=WJG81269.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=PUW38_22475;product=phosphoserine phosphatase;protein_id=WJG81269.1;transl_table=11 CP118116.1 Genbank gene 4634936 4636318 . + . ID=gene-PUW38_22480;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=PUW38_22480 CP118116.1 Protein Homology CDS 4634936 4636318 . + 0 ID=cds-WJG81270.1;Parent=gene-PUW38_22480;Dbxref=NCBI_GP:WJG81270.1;Name=WJG81270.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=PUW38_22480;product=DNA repair protein RadA;protein_id=WJG81270.1;transl_table=11 CP118116.1 Genbank pseudogene 4636469 4637700 . + . ID=gene-PUW38_22485;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=pseudogene;locus_tag=PUW38_22485;pseudo=true CP118116.1 Protein Homology CDS 4636469 4637700 . + 0 ID=cds-PUW38_22485;Parent=gene-PUW38_22485;Note=frameshifted;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=PUW38_22485;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4637818 4639485 . - . ID=gene-PUW38_22490;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=PUW38_22490 CP118116.1 Protein Homology CDS 4637818 4639485 . - 0 ID=cds-WJG81271.1;Parent=gene-PUW38_22490;Dbxref=NCBI_GP:WJG81271.1;Name=WJG81271.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=PUW38_22490;product=energy-dependent translational throttle protein EttA;protein_id=WJG81271.1;transl_table=11 CP118116.1 Genbank gene 4639694 4641631 . + . ID=gene-PUW38_22495;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=PUW38_22495 CP118116.1 Protein Homology CDS 4639694 4641631 . + 0 ID=cds-WJG81272.1;Parent=gene-PUW38_22495;Dbxref=NCBI_GP:WJG81272.1;Name=WJG81272.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=PUW38_22495;product=murein transglycosylase;protein_id=WJG81272.1;transl_table=11 CP118116.1 Genbank gene 4641689 4642015 . + . ID=gene-PUW38_22500;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=PUW38_22500 CP118116.1 Protein Homology CDS 4641689 4642015 . + 0 ID=cds-WJG81273.1;Parent=gene-PUW38_22500;Dbxref=NCBI_GP:WJG81273.1;Name=WJG81273.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=PUW38_22500;product=trp operon repressor;protein_id=WJG81273.1;transl_table=11 CP118116.1 Genbank gene 4642117 4642632 . - . ID=gene-PUW38_22505;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=PUW38_22505 CP118116.1 Protein Homology CDS 4642117 4642632 . - 0 ID=cds-WJG81274.1;Parent=gene-PUW38_22505;Dbxref=NCBI_GP:WJG81274.1;Name=WJG81274.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=PUW38_22505;product=inosine/xanthosine triphosphatase;protein_id=WJG81274.1;transl_table=11 CP118116.1 Genbank gene 4642681 4643328 . + . ID=gene-PUW38_22510;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=PUW38_22510 CP118116.1 Protein Homology CDS 4642681 4643328 . + 0 ID=cds-WJG81275.1;Parent=gene-PUW38_22510;Dbxref=NCBI_GP:WJG81275.1;Name=WJG81275.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=PUW38_22510;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WJG81275.1;transl_table=11 CP118116.1 Genbank gene 4643325 4644194 . - . ID=gene-PUW38_22515;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=PUW38_22515 CP118116.1 Protein Homology CDS 4643325 4644194 . - 0 ID=cds-WJG81276.1;Parent=gene-PUW38_22515;Dbxref=NCBI_GP:WJG81276.1;Name=WJG81276.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=PUW38_22515;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WJG81276.1;transl_table=11 CP118116.1 Genbank gene 4644406 4644879 . + . ID=gene-PUW38_22520;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=PUW38_22520 CP118116.1 Protein Homology CDS 4644406 4644879 . + 0 ID=cds-WJG81277.1;Parent=gene-PUW38_22520;Dbxref=NCBI_GP:WJG81277.1;Name=WJG81277.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=PUW38_22520;product=protein CreA;protein_id=WJG81277.1;transl_table=11 CP118116.1 Genbank gene 4644892 4645581 . + . ID=gene-PUW38_22525;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=PUW38_22525 CP118116.1 Protein Homology CDS 4644892 4645581 . + 0 ID=cds-WJG83319.1;Parent=gene-PUW38_22525;Dbxref=NCBI_GP:WJG83319.1;Name=WJG83319.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=PUW38_22525;product=two-component system response regulator CreB;protein_id=WJG83319.1;transl_table=11 CP118116.1 Genbank gene 4645581 4647005 . + . ID=gene-PUW38_22530;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=PUW38_22530 CP118116.1 Protein Homology CDS 4645581 4647005 . + 0 ID=cds-WJG81278.1;Parent=gene-PUW38_22530;Dbxref=NCBI_GP:WJG81278.1;Name=WJG81278.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=PUW38_22530;product=two-component system sensor histidine kinase CreC;protein_id=WJG81278.1;transl_table=11 CP118116.1 Genbank gene 4647063 4648412 . + . ID=gene-PUW38_22535;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=PUW38_22535 CP118116.1 Protein Homology CDS 4647063 4648412 . + 0 ID=cds-WJG81279.1;Parent=gene-PUW38_22535;Dbxref=NCBI_GP:WJG81279.1;Name=WJG81279.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=PUW38_22535;product=cell envelope integrity protein CreD;protein_id=WJG81279.1;transl_table=11 CP118116.1 Genbank pseudogene 4648470 4649517 . - . ID=gene-PUW38_22540;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=pseudogene;locus_tag=PUW38_22540;pseudo=true CP118116.1 Protein Homology CDS 4648470 4649517 . - 0 ID=cds-PUW38_22540;Parent=gene-PUW38_22540;Note=frameshifted;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=PUW38_22540;product=fimbrial major subunit SthE;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4649558 4650115 . - . ID=gene-PUW38_22545;Name=PUW38_22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22545 CP118116.1 Protein Homology CDS 4649558 4650115 . - 0 ID=cds-WJG81280.1;Parent=gene-PUW38_22545;Dbxref=NCBI_GP:WJG81280.1;Name=WJG81280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=PUW38_22545;product=fimbrial protein;protein_id=WJG81280.1;transl_table=11 CP118116.1 Genbank gene 4650133 4652670 . - . ID=gene-PUW38_22550;Name=PUW38_22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22550 CP118116.1 Protein Homology CDS 4650133 4652670 . - 0 ID=cds-WJG81281.1;Parent=gene-PUW38_22550;Dbxref=NCBI_GP:WJG81281.1;Name=WJG81281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=PUW38_22550;product=fimbrial outer membrane usher protein;protein_id=WJG81281.1;transl_table=11 CP118116.1 Genbank pseudogene 4652716 4653399 . - . ID=gene-PUW38_22555;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=pseudogene;locus_tag=PUW38_22555;pseudo=true CP118116.1 Protein Homology CDS 4652716 4653399 . - 0 ID=cds-PUW38_22555;Parent=gene-PUW38_22555;Note=internal stop;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=PUW38_22555;product=fimbrial biogenesis chaperone SthA;pseudo=true;transl_table=11 CP118116.1 Genbank gene 4653470 4654015 . - . ID=gene-PUW38_22560;Name=PUW38_22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22560 CP118116.1 Protein Homology CDS 4653470 4654015 . - 0 ID=cds-WJG81282.1;Parent=gene-PUW38_22560;Dbxref=NCBI_GP:WJG81282.1;Name=WJG81282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=PUW38_22560;product=fimbrial protein;protein_id=WJG81282.1;transl_table=11 CP118116.1 Genbank gene 4654354 4655025 . - . ID=gene-PUW38_22565;Name=PUW38_22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22565 CP118116.1 Protein Homology CDS 4654354 4655025 . - 0 ID=cds-WJG81283.1;Parent=gene-PUW38_22565;Dbxref=NCBI_GP:WJG81283.1;Name=WJG81283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=PUW38_22565;product=helix-turn-helix domain-containing protein;protein_id=WJG81283.1;transl_table=11 CP118116.1 Genbank gene 4655410 4655724 . - . ID=gene-PUW38_22570;Name=PUW38_22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22570 CP118116.1 Protein Homology CDS 4655410 4655724 . - 0 ID=cds-WJG81284.1;Parent=gene-PUW38_22570;Dbxref=NCBI_GP:WJG81284.1;Name=WJG81284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=PUW38_22570;product=hypothetical protein;protein_id=WJG81284.1;transl_table=11 CP118116.1 Genbank gene 4655991 4656707 . - . ID=gene-PUW38_22575;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=PUW38_22575 CP118116.1 Protein Homology CDS 4655991 4656707 . - 0 ID=cds-WJG81285.1;Parent=gene-PUW38_22575;Dbxref=NCBI_GP:WJG81285.1;Name=WJG81285.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=PUW38_22575;product=two-component system response regulator ArcA;protein_id=WJG81285.1;transl_table=11 CP118116.1 Genbank gene 4656803 4656943 . + . ID=gene-PUW38_22580;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=PUW38_22580 CP118116.1 Protein Homology CDS 4656803 4656943 . + 0 ID=cds-WJG81286.1;Parent=gene-PUW38_22580;Dbxref=NCBI_GP:WJG81286.1;Name=WJG81286.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=PUW38_22580;product=protein YjjY;protein_id=WJG81286.1;transl_table=11 CP118116.1 Genbank gene 4657343 4658029 . + . ID=gene-PUW38_22585;Name=PUW38_22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22585 CP118116.1 Protein Homology CDS 4657343 4658029 . + 0 ID=cds-WJG81287.1;Parent=gene-PUW38_22585;Dbxref=NCBI_GP:WJG81287.1;Name=WJG81287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=PUW38_22585;product=tRNA/rRNA methyltransferase;protein_id=WJG81287.1;transl_table=11 ##sequence-region CP118117.1 1 88336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=594 CP118117.1 Genbank region 1 88336 . + . ID=CP118117.1:1..88336;Dbxref=taxon:594;Is_circular=true;Name=unnamed;collection-date=2017-07-27;country=Eswatini;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Gallus gallus domesticus;plasmid-name=unnamed;serovar=Gallinarum;strain=Es_440297;sub-species=enterica CP118117.1 Genbank gene 154 834 . - . ID=gene-PUW38_22595;Name=PUW38_22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22595 CP118117.1 Protein Homology CDS 154 834 . - 0 ID=cds-WJG83367.1;Parent=gene-PUW38_22595;Dbxref=NCBI_GP:WJG83367.1;Name=WJG83367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490548.1;locus_tag=PUW38_22595;product=DNA methylase;protein_id=WJG83367.1;transl_table=11 CP118117.1 Genbank gene 997 1278 . + . ID=gene-PUW38_22600;Name=PUW38_22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22600 CP118117.1 Protein Homology CDS 997 1278 . + 0 ID=cds-WJG83368.1;Parent=gene-PUW38_22600;Dbxref=NCBI_GP:WJG83368.1;Name=WJG83368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134757.1;locus_tag=PUW38_22600;product=hypothetical protein;protein_id=WJG83368.1;transl_table=11 CP118117.1 Genbank gene 1216 1572 . - . ID=gene-PUW38_22605;Name=PUW38_22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22605 CP118117.1 Protein Homology CDS 1216 1572 . - 0 ID=cds-WJG83369.1;Parent=gene-PUW38_22605;Dbxref=NCBI_GP:WJG83369.1;Name=WJG83369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490547.1;locus_tag=PUW38_22605;product=hypothetical protein;protein_id=WJG83369.1;transl_table=11 CP118117.1 Genbank gene 1565 2035 . - . ID=gene-PUW38_22610;Name=PUW38_22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22610 CP118117.1 Protein Homology CDS 1565 2035 . - 0 ID=cds-WJG83370.1;Parent=gene-PUW38_22610;Dbxref=NCBI_GP:WJG83370.1;Name=WJG83370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490546.1;locus_tag=PUW38_22610;product=hypothetical protein;protein_id=WJG83370.1;transl_table=11 CP118117.1 Genbank gene 2546 2968 . + . ID=gene-PUW38_22615;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PUW38_22615 CP118117.1 Protein Homology CDS 2546 2968 . + 0 ID=cds-WJG83371.1;Parent=gene-PUW38_22615;Dbxref=NCBI_GP:WJG83371.1;Name=WJG83371.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490545.1;locus_tag=PUW38_22615;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WJG83371.1;transl_table=11 CP118117.1 Genbank pseudogene 2968 4242 . + . ID=gene-PUW38_22620;Name=PUW38_22620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22620;pseudo=true CP118117.1 Protein Homology CDS 2968 4242 . + 0 ID=cds-PUW38_22620;Parent=gene-PUW38_22620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490544.1;locus_tag=PUW38_22620;product=Y-family DNA polymerase;pseudo=true;transl_table=11 CP118117.1 Genbank gene 4324 5298 . - . ID=gene-PUW38_22625;Name=PUW38_22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22625 CP118117.1 Protein Homology CDS 4324 5298 . - 0 ID=cds-WJG83372.1;Parent=gene-PUW38_22625;Dbxref=NCBI_GP:WJG83372.1;Name=WJG83372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229774.1;locus_tag=PUW38_22625;product=ParB family protein;protein_id=WJG83372.1;transl_table=11 CP118117.1 Genbank gene 5298 6503 . - . ID=gene-PUW38_22630;Name=PUW38_22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22630 CP118117.1 Protein Homology CDS 5298 6503 . - 0 ID=cds-WJG83373.1;Parent=gene-PUW38_22630;Dbxref=NCBI_GP:WJG83373.1;Name=WJG83373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490542.1;locus_tag=PUW38_22630;product=AAA family ATPase;protein_id=WJG83373.1;transl_table=11 CP118117.1 Genbank gene 6918 7859 . + . ID=gene-PUW38_22635;Name=PUW38_22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22635 CP118117.1 Protein Homology CDS 6918 7859 . + 0 ID=cds-WJG83374.1;Parent=gene-PUW38_22635;Dbxref=NCBI_GP:WJG83374.1;Name=WJG83374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=PUW38_22635;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG83374.1;transl_table=11 CP118117.1 Genbank pseudogene 7856 8457 . - . ID=gene-PUW38_22640;Name=PUW38_22640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22640;pseudo=true CP118117.1 Protein Homology CDS 7856 8457 . - 0 ID=cds-PUW38_22640;Parent=gene-PUW38_22640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1;locus_tag=PUW38_22640;product=DUF2913 family protein;pseudo=true;transl_table=11 CP118117.1 Genbank gene 8514 8930 . - . ID=gene-PUW38_22645;Name=PUW38_22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22645 CP118117.1 Protein Homology CDS 8514 8930 . - 0 ID=cds-WJG83375.1;Parent=gene-PUW38_22645;Dbxref=NCBI_GP:WJG83375.1;Name=WJG83375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988947.1;locus_tag=PUW38_22645;product=hypothetical protein;protein_id=WJG83375.1;transl_table=11 CP118117.1 Genbank gene 9033 9449 . - . ID=gene-PUW38_22650;Name=PUW38_22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22650 CP118117.1 Protein Homology CDS 9033 9449 . - 0 ID=cds-WJG83413.1;Parent=gene-PUW38_22650;Dbxref=NCBI_GP:WJG83413.1;Name=WJG83413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490539.1;locus_tag=PUW38_22650;product=hypothetical protein;protein_id=WJG83413.1;transl_table=11 CP118117.1 Genbank pseudogene 9535 10648 . - . ID=gene-PUW38_22655;Name=PUW38_22655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22655;pseudo=true CP118117.1 Protein Homology CDS 9535 10648 . - 0 ID=cds-PUW38_22655;Parent=gene-PUW38_22655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490538.1;locus_tag=PUW38_22655;product=DNA-binding protein;pseudo=true;transl_table=11 CP118117.1 Genbank gene 10907 11395 . + . ID=gene-PUW38_22660;Name=PUW38_22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22660 CP118117.1 Protein Homology CDS 10907 11395 . + 0 ID=cds-WJG83376.1;Parent=gene-PUW38_22660;Dbxref=NCBI_GP:WJG83376.1;Name=WJG83376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490537.1;locus_tag=PUW38_22660;product=cytoplasmic protein;protein_id=WJG83376.1;transl_table=11 CP118117.1 Genbank gene 12050 12790 . + . ID=gene-PUW38_22665;Name=PUW38_22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22665 CP118117.1 Protein Homology CDS 12050 12790 . + 0 ID=cds-WJG83377.1;Parent=gene-PUW38_22665;Dbxref=NCBI_GP:WJG83377.1;Name=WJG83377.1;Ontology_term=GO:0004089;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490536.1;locus_tag=PUW38_22665;product=carbonic anhydrase family protein;protein_id=WJG83377.1;transl_table=11 CP118117.1 Genbank gene 12997 13557 . + . ID=gene-PUW38_22670;Name=PUW38_22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22670 CP118117.1 Protein Homology CDS 12997 13557 . + 0 ID=cds-WJG83378.1;Parent=gene-PUW38_22670;Dbxref=NCBI_GP:WJG83378.1;Name=WJG83378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490535.1;locus_tag=PUW38_22670;product=recombinase family protein;protein_id=WJG83378.1;transl_table=11 CP118117.1 Genbank gene 13541 15205 . + . ID=gene-PUW38_22675;Name=PUW38_22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22675 CP118117.1 Protein Homology CDS 13541 15205 . + 0 ID=cds-WJG83379.1;Parent=gene-PUW38_22675;Dbxref=NCBI_GP:WJG83379.1;Name=WJG83379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490534.1;locus_tag=PUW38_22675;product=IS481 family transposase;protein_id=WJG83379.1;transl_table=11 CP118117.1 Genbank gene 15138 16163 . + . ID=gene-PUW38_22680;Name=PUW38_22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22680 CP118117.1 Protein Homology CDS 15138 16163 . + 0 ID=cds-WJG83380.1;Parent=gene-PUW38_22680;Dbxref=NCBI_GP:WJG83380.1;Name=WJG83380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490533.1;locus_tag=PUW38_22680;product=ExeA family protein;protein_id=WJG83380.1;transl_table=11 CP118117.1 Genbank gene 16352 17389 . - . ID=gene-PUW38_22685;Name=PUW38_22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22685 CP118117.1 Protein Homology CDS 16352 17389 . - 0 ID=cds-WJG83381.1;Parent=gene-PUW38_22685;Dbxref=NCBI_GP:WJG83381.1;Name=WJG83381.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490532.1;locus_tag=PUW38_22685;product=IS630 family transposase;protein_id=WJG83381.1;transl_table=11 CP118117.1 Genbank gene 17996 18889 . + . ID=gene-PUW38_22690;Name=spvR;gbkey=Gene;gene=spvR;gene_biotype=protein_coding;locus_tag=PUW38_22690 CP118117.1 Protein Homology CDS 17996 18889 . + 0 ID=cds-WJG83414.1;Parent=gene-PUW38_22690;Dbxref=NCBI_GP:WJG83414.1;Name=WJG83414.1;gbkey=CDS;gene=spvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490531.1;locus_tag=PUW38_22690;product=virulence genes transcriptional activator SpvR;protein_id=WJG83414.1;transl_table=11 CP118117.1 Genbank gene 19063 19227 . + . ID=gene-PUW38_22695;Name=PUW38_22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22695 CP118117.1 Protein Homology CDS 19063 19227 . + 0 ID=cds-WJG83382.1;Parent=gene-PUW38_22695;Dbxref=NCBI_GP:WJG83382.1;Name=WJG83382.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576629.1;locus_tag=PUW38_22695;product=glycoside hydrolase family protein;protein_id=WJG83382.1;transl_table=11 CP118117.1 Genbank gene 19401 20168 . + . ID=gene-PUW38_22700;Name=spvA;gbkey=Gene;gene=spvA;gene_biotype=protein_coding;locus_tag=PUW38_22700 CP118117.1 Protein Homology CDS 19401 20168 . + 0 ID=cds-WJG83383.1;Parent=gene-PUW38_22700;Dbxref=NCBI_GP:WJG83383.1;Name=WJG83383.1;gbkey=CDS;gene=spvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490530.1;locus_tag=PUW38_22700;product=virulence protein SpvA;protein_id=WJG83383.1;transl_table=11 CP118117.1 Genbank gene 20131 20298 . + . ID=gene-PUW38_22705;Name=PUW38_22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22705 CP118117.1 GeneMarkS-2+ CDS 20131 20298 . + 0 ID=cds-WJG83415.1;Parent=gene-PUW38_22705;Dbxref=NCBI_GP:WJG83415.1;Name=WJG83415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_22705;product=hypothetical protein;protein_id=WJG83415.1;transl_table=11 CP118117.1 Genbank gene 20350 22131 . + . ID=gene-PUW38_22710;Name=spvB;gbkey=Gene;gene=spvB;gene_biotype=protein_coding;locus_tag=PUW38_22710 CP118117.1 Protein Homology CDS 20350 22131 . + 0 ID=cds-WJG83384.1;Parent=gene-PUW38_22710;Dbxref=NCBI_GP:WJG83384.1;Name=WJG83384.1;gbkey=CDS;gene=spvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490529.1;locus_tag=PUW38_22710;product=SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB;protein_id=WJG83384.1;transl_table=11 CP118117.1 Genbank gene 22412 23137 . + . ID=gene-PUW38_22715;Name=spvC;gbkey=Gene;gene=spvC;gene_biotype=protein_coding;locus_tag=PUW38_22715 CP118117.1 Protein Homology CDS 22412 23137 . + 0 ID=cds-WJG83385.1;Parent=gene-PUW38_22715;Dbxref=NCBI_GP:WJG83385.1;Name=WJG83385.1;gbkey=CDS;gene=spvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490528.1;locus_tag=PUW38_22715;product=type III secretion system effector phosphothreonine lyase SpvC;protein_id=WJG83385.1;transl_table=11 CP118117.1 Genbank gene 24193 24606 . - . ID=gene-PUW38_22720;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PUW38_22720 CP118117.1 Protein Homology CDS 24193 24606 . - 0 ID=cds-WJG83386.1;Parent=gene-PUW38_22720;Dbxref=NCBI_GP:WJG83386.1;Name=WJG83386.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064919.1;locus_tag=PUW38_22720;product=IS200/IS605 family transposase;protein_id=WJG83386.1;transl_table=11 CP118117.1 Genbank gene 24663 25013 . + . ID=gene-PUW38_22725;Name=PUW38_22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22725 CP118117.1 Protein Homology CDS 24663 25013 . + 0 ID=cds-WJG83387.1;Parent=gene-PUW38_22725;Dbxref=NCBI_GP:WJG83387.1;Name=WJG83387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490525.1;locus_tag=PUW38_22725;product=transposase;protein_id=WJG83387.1;transl_table=11 CP118117.1 Genbank pseudogene 25080 25630 . - . ID=gene-PUW38_22730;Name=PUW38_22730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22730;pseudo=true CP118117.1 Protein Homology CDS 25080 25630 . - 0 ID=cds-PUW38_22730;Parent=gene-PUW38_22730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490524.1;locus_tag=PUW38_22730;product=inverse autotransporter beta domain-containing protein;pseudo=true;transl_table=11 CP118117.1 Genbank gene 25519 25848 . - . ID=gene-PUW38_22735;Name=PUW38_22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22735 CP118117.1 GeneMarkS-2+ CDS 25519 25848 . - 0 ID=cds-WJG83388.1;Parent=gene-PUW38_22735;Dbxref=NCBI_GP:WJG83388.1;Name=WJG83388.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_22735;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WJG83388.1;transl_table=11 CP118117.1 Genbank pseudogene 26365 26827 . - . ID=gene-PUW38_22740;Name=PUW38_22740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22740;pseudo=true CP118117.1 Protein Homology CDS 26365 26827 . - 0 ID=cds-PUW38_22740;Parent=gene-PUW38_22740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490523.1;locus_tag=PUW38_22740;product=hypothetical protein;pseudo=true;transl_table=11 CP118117.1 Genbank gene 26821 27309 . - . ID=gene-PUW38_22745;Name=PUW38_22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22745 CP118117.1 Protein Homology CDS 26821 27309 . - 0 ID=cds-WJG83389.1;Parent=gene-PUW38_22745;Dbxref=NCBI_GP:WJG83389.1;Name=WJG83389.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075507.1;locus_tag=PUW38_22745;product=CaiF/GrlA family transcriptional regulator;protein_id=WJG83389.1;transl_table=11 CP118117.1 Genbank gene 27496 28047 . - . ID=gene-PUW38_22750;Name=PUW38_22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22750 CP118117.1 Protein Homology CDS 27496 28047 . - 0 ID=cds-WJG83390.1;Parent=gene-PUW38_22750;Dbxref=NCBI_GP:WJG83390.1;Name=WJG83390.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=PUW38_22750;product=EAL domain-containing protein;protein_id=WJG83390.1;transl_table=11 CP118117.1 Genbank gene 28056 28838 . - . ID=gene-PUW38_22755;Name=PUW38_22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22755 CP118117.1 Protein Homology CDS 28056 28838 . - 0 ID=cds-WJG83391.1;Parent=gene-PUW38_22755;Dbxref=NCBI_GP:WJG83391.1;Name=WJG83391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490521.1;locus_tag=PUW38_22755;product=site-specific integrase;protein_id=WJG83391.1;transl_table=11 CP118117.1 Genbank gene 28873 29394 . - . ID=gene-PUW38_22760;Name=PUW38_22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22760 CP118117.1 Protein Homology CDS 28873 29394 . - 0 ID=cds-WJG83392.1;Parent=gene-PUW38_22760;Dbxref=NCBI_GP:WJG83392.1;Name=WJG83392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490520.1;locus_tag=PUW38_22760;product=cytoplasmic protein;protein_id=WJG83392.1;transl_table=11 CP118117.1 Genbank gene 29391 29681 . - . ID=gene-PUW38_22765;Name=PUW38_22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22765 CP118117.1 Protein Homology CDS 29391 29681 . - 0 ID=cds-WJG83393.1;Parent=gene-PUW38_22765;Dbxref=NCBI_GP:WJG83393.1;Name=WJG83393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490519.1;locus_tag=PUW38_22765;product=cytoplasmic protein;protein_id=WJG83393.1;transl_table=11 CP118117.1 Genbank gene 29683 29988 . - . ID=gene-PUW38_22770;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=PUW38_22770 CP118117.1 Protein Homology CDS 29683 29988 . - 0 ID=cds-WJG83394.1;Parent=gene-PUW38_22770;Dbxref=NCBI_GP:WJG83394.1;Name=WJG83394.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490518.1;locus_tag=PUW38_22770;product=type II toxin-antitoxin system toxin CcdB;protein_id=WJG83394.1;transl_table=11 CP118117.1 Genbank gene 29990 30208 . - . ID=gene-PUW38_22775;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=PUW38_22775 CP118117.1 Protein Homology CDS 29990 30208 . - 0 ID=cds-WJG83395.1;Parent=gene-PUW38_22775;Dbxref=NCBI_GP:WJG83395.1;Name=WJG83395.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490517.1;locus_tag=PUW38_22775;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WJG83395.1;transl_table=11 CP118117.1 Genbank gene 30952 31182 . + . ID=gene-PUW38_22780;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=PUW38_22780 CP118117.1 Protein Homology CDS 30952 31182 . + 0 ID=cds-WJG83396.1;Parent=gene-PUW38_22780;Dbxref=NCBI_GP:WJG83396.1;Name=WJG83396.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=PUW38_22780;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WJG83396.1;transl_table=11 CP118117.1 Genbank gene 31179 31607 . + . ID=gene-PUW38_22785;Name=PUW38_22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22785 CP118117.1 Protein Homology CDS 31179 31607 . + 0 ID=cds-WJG83397.1;Parent=gene-PUW38_22785;Dbxref=NCBI_GP:WJG83397.1;Name=WJG83397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000812999.1;locus_tag=PUW38_22785;product=type II toxin-antitoxin system VapC family toxin;protein_id=WJG83397.1;transl_table=11 CP118117.1 Genbank gene 32177 33025 . - . ID=gene-PUW38_22790;Name=PUW38_22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22790 CP118117.1 Protein Homology CDS 32177 33025 . - 0 ID=cds-WJG83398.1;Parent=gene-PUW38_22790;Dbxref=NCBI_GP:WJG83398.1;Name=WJG83398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=PUW38_22790;product=SdiA-regulated domain-containing protein;protein_id=WJG83398.1;transl_table=11 CP118117.1 Genbank gene 33051 33212 . - . ID=gene-PUW38_22795;Name=PUW38_22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22795 CP118117.1 GeneMarkS-2+ CDS 33051 33212 . - 0 ID=cds-WJG83416.1;Parent=gene-PUW38_22795;Dbxref=NCBI_GP:WJG83416.1;Name=WJG83416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_22795;product=hypothetical protein;protein_id=WJG83416.1;transl_table=11 CP118117.1 Genbank gene 33473 33685 . - . ID=gene-PUW38_22800;Name=PUW38_22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22800 CP118117.1 Protein Homology CDS 33473 33685 . - 0 ID=cds-WJG83399.1;Parent=gene-PUW38_22800;Dbxref=NCBI_GP:WJG83399.1;Name=WJG83399.1;Ontology_term=GO:0006355,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063796.1;locus_tag=PUW38_22800;product=FaeA/PapI family transcriptional regulator;protein_id=WJG83399.1;transl_table=11 CP118117.1 Genbank gene 33758 34342 . - . ID=gene-PUW38_22805;Name=PUW38_22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22805 CP118117.1 Protein Homology CDS 33758 34342 . - 0 ID=cds-WJG83400.1;Parent=gene-PUW38_22805;Dbxref=NCBI_GP:WJG83400.1;Name=WJG83400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=PUW38_22805;product=hypothetical protein;protein_id=WJG83400.1;transl_table=11 CP118117.1 Genbank gene 34467 35180 . - . ID=gene-PUW38_22810;Name=PUW38_22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22810 CP118117.1 Protein Homology CDS 34467 35180 . - 0 ID=cds-WJG83401.1;Parent=gene-PUW38_22810;Dbxref=NCBI_GP:WJG83401.1;Name=WJG83401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801115.1;locus_tag=PUW38_22810;product=fimbrial protein;protein_id=WJG83401.1;transl_table=11 CP118117.1 Genbank gene 35180 35455 . - . ID=gene-PUW38_22815;Name=PUW38_22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22815 CP118117.1 Protein Homology CDS 35180 35455 . - 0 ID=cds-WJG83402.1;Parent=gene-PUW38_22815;Dbxref=NCBI_GP:WJG83402.1;Name=WJG83402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020576.1;locus_tag=PUW38_22815;product=hypothetical protein;protein_id=WJG83402.1;transl_table=11 CP118117.1 Genbank gene 35442 36206 . - . ID=gene-PUW38_22820;Name=PUW38_22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22820 CP118117.1 Protein Homology CDS 35442 36206 . - 0 ID=cds-WJG83403.1;Parent=gene-PUW38_22820;Dbxref=NCBI_GP:WJG83403.1;Name=WJG83403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000827659.1;locus_tag=PUW38_22820;product=fimbrial protein;protein_id=WJG83403.1;transl_table=11 CP118117.1 Genbank gene 36234 37031 . - . ID=gene-PUW38_22825;Name=faeH;gbkey=Gene;gene=faeH;gene_biotype=protein_coding;locus_tag=PUW38_22825 CP118117.1 Protein Homology CDS 36234 37031 . - 0 ID=cds-WJG83404.1;Parent=gene-PUW38_22825;Dbxref=NCBI_GP:WJG83404.1;Name=WJG83404.1;gbkey=CDS;gene=faeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704720.1;locus_tag=PUW38_22825;product=F4 (K88) fimbria minor subunit FaeH;protein_id=WJG83404.1;transl_table=11 CP118117.1 Genbank gene 37267 37539 . - . ID=gene-PUW38_22830;Name=PUW38_22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22830 CP118117.1 GeneMarkS-2+ CDS 37267 37539 . - 0 ID=cds-WJG83405.1;Parent=gene-PUW38_22830;Dbxref=NCBI_GP:WJG83405.1;Name=WJG83405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_22830;product=hypothetical protein;protein_id=WJG83405.1;transl_table=11 CP118117.1 Genbank gene 38998 39657 . + . ID=gene-PUW38_22835;Name=PUW38_22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22835 CP118117.1 Protein Homology CDS 38998 39657 . + 0 ID=cds-WJG83406.1;Parent=gene-PUW38_22835;Dbxref=NCBI_GP:WJG83406.1;Name=WJG83406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575507.1;locus_tag=PUW38_22835;product=fimbrial protein;protein_id=WJG83406.1;transl_table=11 CP118117.1 Genbank gene 39809 40540 . + . ID=gene-PUW38_22840;Name=PUW38_22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22840 CP118117.1 GeneMarkS-2+ CDS 39809 40540 . + 0 ID=cds-WJG83407.1;Parent=gene-PUW38_22840;Dbxref=NCBI_GP:WJG83407.1;Name=WJG83407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_22840;product=hypothetical protein;protein_id=WJG83407.1;transl_table=11 CP118117.1 Genbank gene 40707 40904 . + . ID=gene-PUW38_22845;Name=PUW38_22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22845 CP118117.1 Protein Homology CDS 40707 40904 . + 0 ID=cds-WJG83408.1;Parent=gene-PUW38_22845;Dbxref=NCBI_GP:WJG83408.1;Name=WJG83408.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=PUW38_22845;product=transposase;protein_id=WJG83408.1;transl_table=11 CP118117.1 Genbank pseudogene 41059 41273 . + . ID=gene-PUW38_22850;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=PUW38_22850;pseudo=true CP118117.1 Protein Homology CDS 41059 41273 . + 0 ID=cds-PUW38_22850;Parent=gene-PUW38_22850;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=PUW38_22850;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 CP118117.1 Genbank pseudogene 41265 41669 . + . ID=gene-PUW38_22855;Name=PUW38_22855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22855;pseudo=true CP118117.1 Protein Homology CDS 41265 41669 . + 0 ID=cds-PUW38_22855;Parent=gene-PUW38_22855;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=PUW38_22855;product=IS66 family transposase zinc-finger binding domain-containing protein;pseudo=true;transl_table=11 CP118117.1 Genbank gene 42463 43344 . - . ID=gene-PUW38_22860;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PUW38_22860 CP118117.1 Protein Homology CDS 42463 43344 . - 0 ID=cds-WJG83409.1;Parent=gene-PUW38_22860;Dbxref=NCBI_GP:WJG83409.1;Name=WJG83409.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=PUW38_22860;product=incFII family plasmid replication initiator RepA;protein_id=WJG83409.1;transl_table=11 CP118117.1 Genbank gene 43325 43402 . - . ID=gene-PUW38_22865;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=PUW38_22865 CP118117.1 Protein Homology CDS 43325 43402 . - 0 ID=cds-WJG83411.1;Parent=gene-PUW38_22865;Dbxref=NCBI_GP:WJG83411.1;Name=WJG83411.1;Ontology_term=GO:0006276,GO:0003674;gbkey=CDS;gene=tap;go_function=molecular_function|0003674||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490497.1;locus_tag=PUW38_22865;product=RepA leader peptide Tap;protein_id=WJG83411.1;transl_table=11 CP118117.1 Genbank gene 43650 43916 . - . ID=gene-PUW38_22870;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PUW38_22870 CP118117.1 Protein Homology CDS 43650 43916 . - 0 ID=cds-WJG83410.1;Parent=gene-PUW38_22870;Dbxref=NCBI_GP:WJG83410.1;Name=WJG83410.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490495.1;locus_tag=PUW38_22870;product=replication regulatory protein RepA;protein_id=WJG83410.1;transl_table=11 CP118117.1 Genbank pseudogene 44027 44594 . - . ID=gene-PUW38_22875;Name=PUW38_22875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22875;pseudo=true CP118117.1 Protein Homology CDS 44027 44594 . - 0 ID=cds-PUW38_22875;Parent=gene-PUW38_22875;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242133.1;locus_tag=PUW38_22875;product=phospholipase D family protein;pseudo=true;transl_table=11 CP118117.1 Genbank pseudogene 44781 44864 . - . ID=gene-PUW38_22880;Name=PUW38_22880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22880;pseudo=true CP118117.1 Protein Homology CDS 44781 44864 . - 0 ID=cds-PUW38_22880;Parent=gene-PUW38_22880;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490493.1;locus_tag=PUW38_22880;product=hypothetical protein;pseudo=true;transl_table=11 CP118117.1 Genbank gene 44981 45544 . - . ID=gene-PUW38_22885;Name=PUW38_22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22885 CP118117.1 Protein Homology CDS 44981 45544 . - 0 ID=cds-WJG83326.1;Parent=gene-PUW38_22885;Dbxref=NCBI_GP:WJG83326.1;Name=WJG83326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490594.1;locus_tag=PUW38_22885;product=fertility inhibition protein FinO;protein_id=WJG83326.1;transl_table=11 CP118117.1 Genbank gene 45599 46339 . - . ID=gene-PUW38_22890;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=PUW38_22890 CP118117.1 Protein Homology CDS 45599 46339 . - 0 ID=cds-WJG83327.1;Parent=gene-PUW38_22890;Dbxref=NCBI_GP:WJG83327.1;Name=WJG83327.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490593.1;locus_tag=PUW38_22890;product=conjugal transfer pilus acetylase TraX;protein_id=WJG83327.1;transl_table=11 CP118117.1 Genbank pseudogene 46359 51616 . - . ID=gene-PUW38_22895;Name=traI;gbkey=Gene;gene=traI;gene_biotype=pseudogene;locus_tag=PUW38_22895;pseudo=true CP118117.1 Protein Homology CDS 46359 51616 . - 0 ID=cds-PUW38_22895;Parent=gene-PUW38_22895;Note=frameshifted;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=PUW38_22895;product=conjugative transfer relaxase/helicase TraI;pseudo=true;transl_table=11 CP118117.1 Genbank gene 51616 53868 . - . ID=gene-PUW38_22900;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=PUW38_22900 CP118117.1 Protein Homology CDS 51616 53868 . - 0 ID=cds-WJG83328.1;Parent=gene-PUW38_22900;Dbxref=NCBI_GP:WJG83328.1;Name=WJG83328.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490588.1;locus_tag=PUW38_22900;product=type IV conjugative transfer system coupling protein TraD;protein_id=WJG83328.1;transl_table=11 CP118117.1 Genbank gene 54245 54976 . - . ID=gene-PUW38_22905;Name=PUW38_22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22905 CP118117.1 Protein Homology CDS 54245 54976 . - 0 ID=cds-WJG83329.1;Parent=gene-PUW38_22905;Dbxref=NCBI_GP:WJG83329.1;Name=WJG83329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=PUW38_22905;product=complement resistance protein TraT;protein_id=WJG83329.1;transl_table=11 CP118117.1 Genbank gene 55222 55704 . - . ID=gene-PUW38_22910;Name=PUW38_22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22910 CP118117.1 Protein Homology CDS 55222 55704 . - 0 ID=cds-WJG83330.1;Parent=gene-PUW38_22910;Dbxref=NCBI_GP:WJG83330.1;Name=WJG83330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787664.1;locus_tag=PUW38_22910;product=surface exclusion protein;protein_id=WJG83330.1;transl_table=11 CP118117.1 Genbank gene 55726 58548 . - . ID=gene-PUW38_22915;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=PUW38_22915 CP118117.1 Protein Homology CDS 55726 58548 . - 0 ID=cds-WJG83331.1;Parent=gene-PUW38_22915;Dbxref=NCBI_GP:WJG83331.1;Name=WJG83331.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007083.1;locus_tag=PUW38_22915;product=conjugal transfer mating pair stabilization protein TraG;protein_id=WJG83331.1;transl_table=11 CP118117.1 Genbank pseudogene 58545 59928 . - . ID=gene-PUW38_22920;Name=PUW38_22920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_22920;pseudo=true CP118117.1 Protein Homology CDS 58545 59928 . - 0 ID=cds-PUW38_22920;Parent=gene-PUW38_22920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490584.1;locus_tag=PUW38_22920;product=conjugal transfer protein TraH;pseudo=true;transl_table=11 CP118117.1 Genbank gene 59918 60466 . - . ID=gene-PUW38_22925;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=PUW38_22925 CP118117.1 Protein Homology CDS 59918 60466 . - 0 ID=cds-WJG83332.1;Parent=gene-PUW38_22925;Dbxref=NCBI_GP:WJG83332.1;Name=WJG83332.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490583.1;locus_tag=PUW38_22925;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WJG83332.1;transl_table=11 CP118117.1 Genbank gene 60453 60746 . - . ID=gene-PUW38_22930;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=PUW38_22930 CP118117.1 Protein Homology CDS 60453 60746 . - 0 ID=cds-WJG83333.1;Parent=gene-PUW38_22930;Dbxref=NCBI_GP:WJG83333.1;Name=WJG83333.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490582.1;locus_tag=PUW38_22930;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WJG83333.1;transl_table=11 CP118117.1 Genbank gene 60960 61703 . - . ID=gene-PUW38_22935;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=PUW38_22935 CP118117.1 Protein Homology CDS 60960 61703 . - 0 ID=cds-WJG83334.1;Parent=gene-PUW38_22935;Dbxref=NCBI_GP:WJG83334.1;Name=WJG83334.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490581.1;locus_tag=PUW38_22935;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WJG83334.1;transl_table=11 CP118117.1 Genbank gene 61716 61931 . - . ID=gene-PUW38_22940;Name=PUW38_22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22940 CP118117.1 Protein Homology CDS 61716 61931 . - 0 ID=cds-WJG83335.1;Parent=gene-PUW38_22940;Dbxref=NCBI_GP:WJG83335.1;Name=WJG83335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746544.1;locus_tag=PUW38_22940;product=conjugal transfer protein TrbE;protein_id=WJG83335.1;transl_table=11 CP118117.1 Genbank gene 61942 62418 . - . ID=gene-PUW38_22945;Name=PUW38_22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22945 CP118117.1 Protein Homology CDS 61942 62418 . - 0 ID=cds-WJG83336.1;Parent=gene-PUW38_22945;Dbxref=NCBI_GP:WJG83336.1;Name=WJG83336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746543.1;locus_tag=PUW38_22945;product=hypothetical protein;protein_id=WJG83336.1;transl_table=11 CP118117.1 Genbank gene 62429 64246 . - . ID=gene-PUW38_22950;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=PUW38_22950 CP118117.1 Protein Homology CDS 62429 64246 . - 0 ID=cds-WJG83337.1;Parent=gene-PUW38_22950;Dbxref=NCBI_GP:WJG83337.1;Name=WJG83337.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490579.1;locus_tag=PUW38_22950;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WJG83337.1;transl_table=11 CP118117.1 Genbank gene 64243 64662 . - . ID=gene-PUW38_22955;Name=PUW38_22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22955 CP118117.1 Protein Homology CDS 64243 64662 . - 0 ID=cds-WJG83338.1;Parent=gene-PUW38_22955;Dbxref=NCBI_GP:WJG83338.1;Name=WJG83338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229397.1;locus_tag=PUW38_22955;product=HNH endonuclease;protein_id=WJG83338.1;transl_table=11 CP118117.1 Genbank gene 64693 65331 . - . ID=gene-PUW38_22960;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=PUW38_22960 CP118117.1 Protein Homology CDS 64693 65331 . - 0 ID=cds-WJG83339.1;Parent=gene-PUW38_22960;Dbxref=NCBI_GP:WJG83339.1;Name=WJG83339.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490578.1;locus_tag=PUW38_22960;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WJG83339.1;transl_table=11 CP118117.1 Genbank gene 65316 65624 . - . ID=gene-PUW38_22965;Name=PUW38_22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22965 CP118117.1 Protein Homology CDS 65316 65624 . - 0 ID=cds-WJG83340.1;Parent=gene-PUW38_22965;Dbxref=NCBI_GP:WJG83340.1;Name=WJG83340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490577.1;locus_tag=PUW38_22965;product=hypothetical protein;protein_id=WJG83340.1;transl_table=11 CP118117.1 Genbank gene 65643 66635 . - . ID=gene-PUW38_22970;Name=PUW38_22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22970 CP118117.1 Protein Homology CDS 65643 66635 . - 0 ID=cds-WJG83341.1;Parent=gene-PUW38_22970;Dbxref=NCBI_GP:WJG83341.1;Name=WJG83341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=PUW38_22970;product=conjugal transfer pilus assembly protein TraU;protein_id=WJG83341.1;transl_table=11 CP118117.1 Genbank gene 66632 67264 . - . ID=gene-PUW38_22975;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=PUW38_22975 CP118117.1 Protein Homology CDS 66632 67264 . - 0 ID=cds-WJG83342.1;Parent=gene-PUW38_22975;Dbxref=NCBI_GP:WJG83342.1;Name=WJG83342.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=PUW38_22975;product=type-F conjugative transfer system protein TraW;protein_id=WJG83342.1;transl_table=11 CP118117.1 Genbank gene 67261 67647 . - . ID=gene-PUW38_22980;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=PUW38_22980 CP118117.1 Protein Homology CDS 67261 67647 . - 0 ID=cds-WJG83343.1;Parent=gene-PUW38_22980;Dbxref=NCBI_GP:WJG83343.1;Name=WJG83343.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=PUW38_22980;product=type-F conjugative transfer system protein TrbI;protein_id=WJG83343.1;transl_table=11 CP118117.1 Genbank pseudogene 67622 70269 . - . ID=gene-PUW38_22985;Name=traC;gbkey=Gene;gene=traC;gene_biotype=pseudogene;locus_tag=PUW38_22985;pseudo=true CP118117.1 Protein Homology CDS 67622 70269 . - 0 ID=cds-PUW38_22985;Parent=gene-PUW38_22985;Note=frameshifted;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490573.1;locus_tag=PUW38_22985;product=type IV secretion system protein TraC;pseudo=true;transl_table=11 CP118117.1 Genbank gene 70285 70668 . - . ID=gene-PUW38_22990;Name=PUW38_22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22990 CP118117.1 Protein Homology CDS 70285 70668 . - 0 ID=cds-WJG83344.1;Parent=gene-PUW38_22990;Dbxref=NCBI_GP:WJG83344.1;Name=WJG83344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870327.1;locus_tag=PUW38_22990;product=hypothetical protein;protein_id=WJG83344.1;transl_table=11 CP118117.1 Genbank gene 70665 71132 . - . ID=gene-PUW38_22995;Name=PUW38_22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22995 CP118117.1 Protein Homology CDS 70665 71132 . - 0 ID=cds-WJG83345.1;Parent=gene-PUW38_22995;Dbxref=NCBI_GP:WJG83345.1;Name=WJG83345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490572.1;locus_tag=PUW38_22995;product=hypothetical protein;protein_id=WJG83345.1;transl_table=11 CP118117.1 Genbank pseudogene 71125 71345 . - . ID=gene-PUW38_23000;Name=traR;gbkey=Gene;gene=traR;gene_biotype=pseudogene;locus_tag=PUW38_23000;pseudo=true CP118117.1 Protein Homology CDS 71125 71345 . - 0 ID=cds-PUW38_23000;Parent=gene-PUW38_23000;Note=frameshifted;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=PUW38_23000;product=conjugal transfer protein TraR;pseudo=true;transl_table=11 CP118117.1 Genbank gene 71480 71995 . - . ID=gene-PUW38_23005;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=PUW38_23005 CP118117.1 Protein Homology CDS 71480 71995 . - 0 ID=cds-WJG83346.1;Parent=gene-PUW38_23005;Dbxref=NCBI_GP:WJG83346.1;Name=WJG83346.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490570.1;locus_tag=PUW38_23005;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WJG83346.1;transl_table=11 CP118117.1 Genbank gene 71992 72216 . - . ID=gene-PUW38_23010;Name=PUW38_23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23010 CP118117.1 Protein Homology CDS 71992 72216 . - 0 ID=cds-WJG83347.1;Parent=gene-PUW38_23010;Dbxref=NCBI_GP:WJG83347.1;Name=WJG83347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490569.1;locus_tag=PUW38_23010;product=DUF2689 domain-containing protein;protein_id=WJG83347.1;transl_table=11 CP118117.1 Genbank gene 72194 72790 . - . ID=gene-PUW38_23015;Name=PUW38_23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23015 CP118117.1 Protein Homology CDS 72194 72790 . - 0 ID=cds-WJG83348.1;Parent=gene-PUW38_23015;Dbxref=NCBI_GP:WJG83348.1;Name=WJG83348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490568.1;locus_tag=PUW38_23015;product=conjugal transfer protein TraP;protein_id=WJG83348.1;transl_table=11 CP118117.1 Genbank pseudogene 72780 74199 . - . ID=gene-PUW38_23020;Name=PUW38_23020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_23020;pseudo=true CP118117.1 Protein Homology CDS 72780 74199 . - 0 ID=cds-PUW38_23020;Parent=gene-PUW38_23020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490567.1;locus_tag=PUW38_23020;product=conjugal transfer protein TraB;pseudo=true;transl_table=11 CP118117.1 Genbank gene 74199 74939 . - . ID=gene-PUW38_23025;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=PUW38_23025 CP118117.1 Protein Homology CDS 74199 74939 . - 0 ID=cds-WJG83349.1;Parent=gene-PUW38_23025;Dbxref=NCBI_GP:WJG83349.1;Name=WJG83349.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=PUW38_23025;product=type-F conjugative transfer system secretin TraK;protein_id=WJG83349.1;transl_table=11 CP118117.1 Genbank gene 74926 75492 . - . ID=gene-PUW38_23030;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=PUW38_23030 CP118117.1 Protein Homology CDS 74926 75492 . - 0 ID=cds-WJG83350.1;Parent=gene-PUW38_23030;Dbxref=NCBI_GP:WJG83350.1;Name=WJG83350.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=PUW38_23030;product=type IV conjugative transfer system protein TraE;protein_id=WJG83350.1;transl_table=11 CP118117.1 Genbank gene 75514 75825 . - . ID=gene-PUW38_23035;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=PUW38_23035 CP118117.1 Protein Homology CDS 75514 75825 . - 0 ID=cds-WJG83351.1;Parent=gene-PUW38_23035;Dbxref=NCBI_GP:WJG83351.1;Name=WJG83351.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=PUW38_23035;product=type IV conjugative transfer system protein TraL;protein_id=WJG83351.1;transl_table=11 CP118117.1 Genbank gene 75840 76202 . - . ID=gene-PUW38_23040;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=PUW38_23040 CP118117.1 Protein Homology CDS 75840 76202 . - 0 ID=cds-WJG83352.1;Parent=gene-PUW38_23040;Dbxref=NCBI_GP:WJG83352.1;Name=WJG83352.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490563.1;locus_tag=PUW38_23040;product=type IV conjugative transfer system pilin TraA;protein_id=WJG83352.1;transl_table=11 CP118117.1 Genbank gene 76244 76645 . - . ID=gene-PUW38_23045;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=PUW38_23045 CP118117.1 Protein Homology CDS 76244 76645 . - 0 ID=cds-WJG83353.1;Parent=gene-PUW38_23045;Dbxref=NCBI_GP:WJG83353.1;Name=WJG83353.1;gbkey=CDS;gene=traY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672631.1;locus_tag=PUW38_23045;product=conjugal transfer relaxosome protein TraY;protein_id=WJG83353.1;transl_table=11 CP118117.1 Genbank gene 76738 77427 . - . ID=gene-PUW38_23050;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=PUW38_23050 CP118117.1 Protein Homology CDS 76738 77427 . - 0 ID=cds-WJG83354.1;Parent=gene-PUW38_23050;Dbxref=NCBI_GP:WJG83354.1;Name=WJG83354.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746563.1;locus_tag=PUW38_23050;product=conjugal transfer transcriptional regulator TraJ;protein_id=WJG83354.1;transl_table=11 CP118117.1 Genbank gene 77629 78000 . - . ID=gene-PUW38_23055;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=PUW38_23055 CP118117.1 Protein Homology CDS 77629 78000 . - 0 ID=cds-WJG83355.1;Parent=gene-PUW38_23055;Dbxref=NCBI_GP:WJG83355.1;Name=WJG83355.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151569.1;locus_tag=PUW38_23055;product=relaxosome protein TraM;protein_id=WJG83355.1;transl_table=11 CP118117.1 Genbank gene 78423 78893 . + . ID=gene-PUW38_23060;Name=PUW38_23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23060 CP118117.1 Protein Homology CDS 78423 78893 . + 0 ID=cds-WJG83412.1;Parent=gene-PUW38_23060;Dbxref=NCBI_GP:WJG83412.1;Name=WJG83412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490559.1;locus_tag=PUW38_23060;product=transglycosylase SLT domain-containing protein;protein_id=WJG83412.1;transl_table=11 CP118117.1 Genbank pseudogene 79203 80021 . - . ID=gene-PUW38_23065;Name=PUW38_23065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_23065;pseudo=true CP118117.1 Protein Homology CDS 79203 80021 . - 0 ID=cds-PUW38_23065;Parent=gene-PUW38_23065;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=PUW38_23065;product=DUF932 domain-containing protein;pseudo=true;transl_table=11 CP118117.1 Genbank gene 80124 80282 . - . ID=gene-PUW38_23070;Name=PUW38_23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23070 CP118117.1 Protein Homology CDS 80124 80282 . - 0 ID=cds-WJG83356.1;Parent=gene-PUW38_23070;Dbxref=NCBI_GP:WJG83356.1;Name=WJG83356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001704449.1;locus_tag=PUW38_23070;product=hypothetical protein;protein_id=WJG83356.1;transl_table=11 CP118117.1 Genbank gene 80368 80496 . - . ID=gene-PUW38_23075;Name=PUW38_23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23075 CP118117.1 GeneMarkS-2+ CDS 80368 80496 . - 0 ID=cds-WJG83357.1;Parent=gene-PUW38_23075;Dbxref=NCBI_GP:WJG83357.1;Name=WJG83357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_23075;product=hypothetical protein;protein_id=WJG83357.1;transl_table=11 CP118117.1 Genbank pseudogene 80531 81187 . - . ID=gene-PUW38_23080;Name=PUW38_23080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_23080;pseudo=true CP118117.1 Protein Homology CDS 80531 81187 . - 0 ID=cds-PUW38_23080;Parent=gene-PUW38_23080;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490558.1;locus_tag=PUW38_23080;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 CP118117.1 Genbank pseudogene 81181 81315 . - . ID=gene-PUW38_23085;Name=PUW38_23085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_23085;pseudo=true CP118117.1 Protein Homology CDS 81181 81315 . - 0 ID=cds-PUW38_23085;Parent=gene-PUW38_23085;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490557.1;locus_tag=PUW38_23085;product=conjugation system SOS inhibitor PsiB family protein;pseudo=true;transl_table=11 CP118117.1 Genbank gene 81355 83352 . - . ID=gene-PUW38_23090;Name=PUW38_23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23090 CP118117.1 Protein Homology CDS 81355 83352 . - 0 ID=cds-WJG83358.1;Parent=gene-PUW38_23090;Dbxref=NCBI_GP:WJG83358.1;Name=WJG83358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490556.1;locus_tag=PUW38_23090;product=ParB/RepB/Spo0J family partition protein;protein_id=WJG83358.1;transl_table=11 CP118117.1 Genbank gene 83421 83663 . - . ID=gene-PUW38_23095;Name=PUW38_23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23095 CP118117.1 Protein Homology CDS 83421 83663 . - 0 ID=cds-WJG83359.1;Parent=gene-PUW38_23095;Dbxref=NCBI_GP:WJG83359.1;Name=WJG83359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490555.1;locus_tag=PUW38_23095;product=DUF905 domain-containing protein;protein_id=WJG83359.1;transl_table=11 CP118117.1 Genbank pseudogene 83718 84237 . - . ID=gene-PUW38_23100;Name=PUW38_23100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW38_23100;pseudo=true CP118117.1 Protein Homology CDS 83718 84237 . - 0 ID=cds-PUW38_23100;Parent=gene-PUW38_23100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490554.1;locus_tag=PUW38_23100;product=single-stranded DNA-binding protein SSB2;pseudo=true;transl_table=11 CP118117.1 Genbank gene 84831 85010 . - . ID=gene-PUW38_23105;Name=PUW38_23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23105 CP118117.1 GeneMarkS-2+ CDS 84831 85010 . - 0 ID=cds-WJG83360.1;Parent=gene-PUW38_23105;Dbxref=NCBI_GP:WJG83360.1;Name=WJG83360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW38_23105;product=hypothetical protein;protein_id=WJG83360.1;transl_table=11 CP118117.1 Genbank gene 84974 85297 . - . ID=gene-PUW38_23110;Name=PUW38_23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23110 CP118117.1 Protein Homology CDS 84974 85297 . - 0 ID=cds-WJG83361.1;Parent=gene-PUW38_23110;Dbxref=NCBI_GP:WJG83361.1;Name=WJG83361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490553.1;locus_tag=PUW38_23110;product=DNA polymerase III subunit theta;protein_id=WJG83361.1;transl_table=11 CP118117.1 Genbank gene 85533 85967 . - . ID=gene-PUW38_23115;Name=PUW38_23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23115 CP118117.1 Protein Homology CDS 85533 85967 . - 0 ID=cds-WJG83362.1;Parent=gene-PUW38_23115;Dbxref=NCBI_GP:WJG83362.1;Name=WJG83362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490552.1;locus_tag=PUW38_23115;product=DUF1380 family protein;protein_id=WJG83362.1;transl_table=11 CP118117.1 Genbank gene 86034 86468 . - . ID=gene-PUW38_23120;Name=PUW38_23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23120 CP118117.1 Protein Homology CDS 86034 86468 . - 0 ID=cds-WJG83363.1;Parent=gene-PUW38_23120;Dbxref=NCBI_GP:WJG83363.1;Name=WJG83363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490551.1;locus_tag=PUW38_23120;product=antirestriction protein;protein_id=WJG83363.1;transl_table=11 CP118117.1 Genbank gene 86964 87728 . - . ID=gene-PUW38_23125;Name=PUW38_23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23125 CP118117.1 Protein Homology CDS 86964 87728 . - 0 ID=cds-WJG83364.1;Parent=gene-PUW38_23125;Dbxref=NCBI_GP:WJG83364.1;Name=WJG83364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490550.1;locus_tag=PUW38_23125;product=hypothetical protein;protein_id=WJG83364.1;transl_table=11 CP118117.1 Genbank gene 87800 88213 . - . ID=gene-PUW38_23130;Name=PUW38_23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_23130 CP118117.1 Protein Homology CDS 87800 88213 . - 0 ID=cds-WJG83365.1;Parent=gene-PUW38_23130;Dbxref=NCBI_GP:WJG83365.1;Name=WJG83365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990115.1;locus_tag=PUW38_23130;product=DUF1380 family protein;protein_id=WJG83365.1;transl_table=11 CP118117.1 Genbank gene 88269 88490 . - . ID=gene-PUW38_22590;Name=PUW38_22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW38_22590 CP118117.1 Protein Homology CDS 88269 88490 . - 0 ID=cds-WJG83366.1;Parent=gene-PUW38_22590;Dbxref=NCBI_GP:WJG83366.1;Name=WJG83366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490549.1;locus_tag=PUW38_22590;product=hypothetical protein;protein_id=WJG83366.1;transl_table=11 ###