##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3031650v1 #!genome-build-accession NCBI_Assembly:GCA_030316505.1 #!annotation-date 02/14/2023 14:50:03 #!annotation-source NCBI ##sequence-region CP118122.1 1 4658201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=594 CP118122.1 Genbank region 1 4658201 . + . ID=CP118122.1:1..4658201;Dbxref=taxon:594;Is_circular=true;Name=ANONYMOUS;collection-date=2017-08-11;country=South Africa: Gauteng;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Gallus gallus domesticus;serovar=Gallinarum;strain=ZA_442695;sub-species=enterica CP118122.1 Genbank gene 80 145 . + . ID=gene-PUW34_00005;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=PUW34_00005 CP118122.1 Protein Homology CDS 80 145 . + 0 ID=cds-WJG99077.1;Parent=gene-PUW34_00005;Dbxref=NCBI_GP:WJG99077.1;Name=WJG99077.1;Ontology_term=GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=PUW34_00005;product=thr operon leader peptide;protein_id=WJG99077.1;transl_table=11 CP118122.1 cmsearch sequence_feature 81 201 . + . ID=id-CP118122.1:81..201;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118122.1 Genbank gene 227 2689 . + . ID=gene-PUW34_00010;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=PUW34_00010 CP118122.1 Protein Homology CDS 227 2689 . + 0 ID=cds-WJG97038.1;Parent=gene-PUW34_00010;Dbxref=NCBI_GP:WJG97038.1;Name=WJG97038.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=PUW34_00010;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WJG97038.1;transl_table=11 CP118122.1 Genbank gene 2691 3620 . + . ID=gene-PUW34_00015;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=PUW34_00015 CP118122.1 Protein Homology CDS 2691 3620 . + 0 ID=cds-WJG97039.1;Parent=gene-PUW34_00015;Dbxref=NCBI_GP:WJG97039.1;Name=WJG97039.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=PUW34_00015;product=homoserine kinase;protein_id=WJG97039.1;transl_table=11 CP118122.1 Genbank gene 3624 4910 . + . ID=gene-PUW34_00020;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=PUW34_00020 CP118122.1 Protein Homology CDS 3624 4910 . + 0 ID=cds-WJG97040.1;Parent=gene-PUW34_00020;Dbxref=NCBI_GP:WJG97040.1;Name=WJG97040.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=PUW34_00020;product=threonine synthase;protein_id=WJG97040.1;transl_table=11 CP118122.1 Genbank gene 5004 5777 . - . ID=gene-PUW34_00025;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=PUW34_00025 CP118122.1 Protein Homology CDS 5004 5777 . - 0 ID=cds-WJG97041.1;Parent=gene-PUW34_00025;Dbxref=NCBI_GP:WJG97041.1;Name=WJG97041.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=PUW34_00025;product=peroxide stress protein YaaA;protein_id=WJG97041.1;transl_table=11 CP118122.1 Genbank gene 5856 7286 . - . ID=gene-PUW34_00030;Name=PUW34_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00030 CP118122.1 Protein Homology CDS 5856 7286 . - 0 ID=cds-WJG97042.1;Parent=gene-PUW34_00030;Dbxref=NCBI_GP:WJG97042.1;Name=WJG97042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=PUW34_00030;product=sodium:alanine symporter family protein;protein_id=WJG97042.1;transl_table=11 CP118122.1 Genbank gene 7555 8508 . + . ID=gene-PUW34_00035;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PUW34_00035 CP118122.1 Protein Homology CDS 7555 8508 . + 0 ID=cds-WJG97043.1;Parent=gene-PUW34_00035;Dbxref=NCBI_GP:WJG97043.1;Name=WJG97043.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=PUW34_00035;product=transaldolase;protein_id=WJG97043.1;transl_table=11 CP118122.1 Genbank gene 8619 9209 . + . ID=gene-PUW34_00040;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=PUW34_00040 CP118122.1 Protein Homology CDS 8619 9209 . + 0 ID=cds-WJG97044.1;Parent=gene-PUW34_00040;Dbxref=NCBI_GP:WJG97044.1;Name=WJG97044.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=PUW34_00040;product=molybdopterin adenylyltransferase;protein_id=WJG97044.1;transl_table=11 CP118122.1 Genbank gene 9266 9832 . - . ID=gene-PUW34_00045;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=PUW34_00045 CP118122.1 Protein Homology CDS 9266 9832 . - 0 ID=cds-WJG97045.1;Parent=gene-PUW34_00045;Dbxref=NCBI_GP:WJG97045.1;Name=WJG97045.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=PUW34_00045;product=acetate uptake transporter;protein_id=WJG97045.1;transl_table=11 CP118122.1 Genbank pseudogene 9982 10695 . - . ID=gene-PUW34_00050;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=pseudogene;locus_tag=PUW34_00050;pseudo=true CP118122.1 Protein Homology CDS 9982 10695 . - 0 ID=cds-PUW34_00050;Parent=gene-PUW34_00050;Note=internal stop;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=PUW34_00050;product=acidic protein MsyB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 10731 11135 . - . ID=gene-PUW34_00055;Name=PUW34_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00055 CP118122.1 Protein Homology CDS 10731 11135 . - 0 ID=cds-WJG97046.1;Parent=gene-PUW34_00055;Dbxref=NCBI_GP:WJG97046.1;Name=WJG97046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=PUW34_00055;product=DUF2541 family protein;protein_id=WJG97046.1;transl_table=11 CP118122.1 Genbank gene 11483 13399 . + . ID=gene-PUW34_00060;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=PUW34_00060 CP118122.1 Protein Homology CDS 11483 13399 . + 0 ID=cds-WJG97047.1;Parent=gene-PUW34_00060;Dbxref=NCBI_GP:WJG97047.1;Name=WJG97047.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=PUW34_00060;product=molecular chaperone DnaK;protein_id=WJG97047.1;transl_table=11 CP118122.1 Genbank gene 13485 14624 . + . ID=gene-PUW34_00065;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=PUW34_00065 CP118122.1 Protein Homology CDS 13485 14624 . + 0 ID=cds-WJG97048.1;Parent=gene-PUW34_00065;Dbxref=NCBI_GP:WJG97048.1;Name=WJG97048.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=PUW34_00065;product=molecular chaperone DnaJ;protein_id=WJG97048.1;transl_table=11 CP118122.1 Genbank gene 14905 15852 . + . ID=gene-PUW34_00070;Name=PUW34_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00070 CP118122.1 Protein Homology CDS 14905 15852 . + 0 ID=cds-WJG97049.1;Parent=gene-PUW34_00070;Dbxref=NCBI_GP:WJG97049.1;Name=WJG97049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=PUW34_00070;product=LysR family transcriptional regulator;protein_id=WJG97049.1;transl_table=11 CP118122.1 Genbank gene 15979 16323 . + . ID=gene-PUW34_00075;Name=PUW34_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00075 CP118122.1 Protein Homology CDS 15979 16323 . + 0 ID=cds-WJG97050.1;Parent=gene-PUW34_00075;Dbxref=NCBI_GP:WJG97050.1;Name=WJG97050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=PUW34_00075;product=phage holin family protein;protein_id=WJG97050.1;transl_table=11 CP118122.1 Genbank gene 16384 16917 . - . ID=gene-PUW34_00080;Name=PUW34_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00080 CP118122.1 Protein Homology CDS 16384 16917 . - 0 ID=cds-WJG97051.1;Parent=gene-PUW34_00080;Dbxref=NCBI_GP:WJG97051.1;Name=WJG97051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=PUW34_00080;product=glycoside hydrolase family 108 protein;protein_id=WJG97051.1;transl_table=11 CP118122.1 Genbank gene 16934 17377 . - . ID=gene-PUW34_00085;Name=PUW34_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00085 CP118122.1 Protein Homology CDS 16934 17377 . - 0 ID=cds-WJG97052.1;Parent=gene-PUW34_00085;Dbxref=NCBI_GP:WJG97052.1;Name=WJG97052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=PUW34_00085;product=transcriptional regulator;protein_id=WJG97052.1;transl_table=11 CP118122.1 Genbank pseudogene 17758 19854 . + . ID=gene-PUW34_00090;Name=PUW34_00090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00090;pseudo=true CP118122.1 Protein Homology CDS 17758 19854 . + 0 ID=cds-PUW34_00090;Parent=gene-PUW34_00090;Note=frameshifted;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=PUW34_00090;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 19946 22942 . + . ID=gene-PUW34_00095;Name=PUW34_00095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00095;pseudo=true CP118122.1 Protein Homology CDS 19946 22942 . + 0 ID=cds-PUW34_00095;Parent=gene-PUW34_00095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=PUW34_00095;product=chitinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 23222 23926 . + . ID=gene-PUW34_00100;Name=PUW34_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00100 CP118122.1 Protein Homology CDS 23222 23926 . + 0 ID=cds-WJG97053.1;Parent=gene-PUW34_00100;Dbxref=NCBI_GP:WJG97053.1;Name=WJG97053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=PUW34_00100;product=helix-turn-helix domain-containing protein;protein_id=WJG97053.1;transl_table=11 CP118122.1 Genbank gene 24356 24898 . + . ID=gene-PUW34_00105;Name=PUW34_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00105 CP118122.1 Protein Homology CDS 24356 24898 . + 0 ID=cds-WJG97054.1;Parent=gene-PUW34_00105;Dbxref=NCBI_GP:WJG97054.1;Name=WJG97054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=PUW34_00105;product=fimbrial protein BcfA;protein_id=WJG97054.1;transl_table=11 CP118122.1 Genbank gene 24999 25685 . + . ID=gene-PUW34_00110;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=PUW34_00110 CP118122.1 Protein Homology CDS 24999 25685 . + 0 ID=cds-WJG97055.1;Parent=gene-PUW34_00110;Dbxref=NCBI_GP:WJG97055.1;Name=WJG97055.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=PUW34_00110;product=fimbrial biogenesis chaperone BcfB;protein_id=WJG97055.1;transl_table=11 CP118122.1 Genbank gene 25690 28311 . + . ID=gene-PUW34_00115;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=PUW34_00115 CP118122.1 Protein Homology CDS 25690 28311 . + 0 ID=cds-WJG97056.1;Parent=gene-PUW34_00115;Dbxref=NCBI_GP:WJG97056.1;Name=WJG97056.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=PUW34_00115;product=fimbrial usher BcfC;protein_id=WJG97056.1;transl_table=11 CP118122.1 Genbank gene 28312 29319 . + . ID=gene-PUW34_00120;Name=PUW34_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00120 CP118122.1 Protein Homology CDS 28312 29319 . + 0 ID=cds-WJG97057.1;Parent=gene-PUW34_00120;Dbxref=NCBI_GP:WJG97057.1;Name=WJG97057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=PUW34_00120;product=fimbrial protein BcfD;protein_id=WJG97057.1;transl_table=11 CP118122.1 Genbank gene 29320 29865 . + . ID=gene-PUW34_00125;Name=PUW34_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00125 CP118122.1 Protein Homology CDS 29320 29865 . + 0 ID=cds-WJG97058.1;Parent=gene-PUW34_00125;Dbxref=NCBI_GP:WJG97058.1;Name=WJG97058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=PUW34_00125;product=fimbrial protein BcfE;protein_id=WJG97058.1;transl_table=11 CP118122.1 Genbank gene 29881 30399 . + . ID=gene-PUW34_00130;Name=PUW34_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00130 CP118122.1 Protein Homology CDS 29881 30399 . + 0 ID=cds-WJG97059.1;Parent=gene-PUW34_00130;Dbxref=NCBI_GP:WJG97059.1;Name=WJG97059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=PUW34_00130;product=fimbrial protein BcfF;protein_id=WJG97059.1;transl_table=11 CP118122.1 Genbank gene 30365 31096 . + . ID=gene-PUW34_00135;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=PUW34_00135 CP118122.1 Protein Homology CDS 30365 31096 . + 0 ID=cds-WJG97060.1;Parent=gene-PUW34_00135;Dbxref=NCBI_GP:WJG97060.1;Name=WJG97060.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=PUW34_00135;product=fimbrial chaperone BcfG;protein_id=WJG97060.1;transl_table=11 CP118122.1 Genbank pseudogene 31160 32003 . + . ID=gene-PUW34_00140;Name=PUW34_00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00140;pseudo=true CP118122.1 Protein Homology CDS 31160 32003 . + 0 ID=cds-PUW34_00140;Parent=gene-PUW34_00140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=PUW34_00140;product=DsbA family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 32042 32329 . + . ID=gene-PUW34_00145;Name=PUW34_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00145 CP118122.1 Protein Homology CDS 32042 32329 . + 0 ID=cds-WJG97061.1;Parent=gene-PUW34_00145;Dbxref=NCBI_GP:WJG97061.1;Name=WJG97061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=PUW34_00145;product=hypothetical protein;protein_id=WJG97061.1;transl_table=11 CP118122.1 Genbank gene 32429 32878 . - . ID=gene-PUW34_00150;Name=PUW34_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00150 CP118122.1 Protein Homology CDS 32429 32878 . - 0 ID=cds-WJG97062.1;Parent=gene-PUW34_00150;Dbxref=NCBI_GP:WJG97062.1;Name=WJG97062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=PUW34_00150;product=transcriptional regulator;protein_id=WJG97062.1;transl_table=11 CP118122.1 Genbank gene 33248 34252 . + . ID=gene-PUW34_00155;Name=PUW34_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00155 CP118122.1 Protein Homology CDS 33248 34252 . + 0 ID=cds-WJG97063.1;Parent=gene-PUW34_00155;Dbxref=NCBI_GP:WJG97063.1;Name=WJG97063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=PUW34_00155;product=LysR family transcriptional regulator;protein_id=WJG97063.1;transl_table=11 CP118122.1 Genbank pseudogene 34260 34699 . - . ID=gene-PUW34_00160;Name=PUW34_00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00160;pseudo=true CP118122.1 Protein Homology CDS 34260 34699 . - 0 ID=cds-PUW34_00160;Parent=gene-PUW34_00160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=PUW34_00160;product=transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 35222 36940 . + . ID=gene-PUW34_00165;Name=PUW34_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00165 CP118122.1 Protein Homology CDS 35222 36940 . + 0 ID=cds-WJG97064.1;Parent=gene-PUW34_00165;Dbxref=NCBI_GP:WJG97064.1;Name=WJG97064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=PUW34_00165;product=aryl-sulfate sulfotransferase;protein_id=WJG97064.1;transl_table=11 CP118122.1 Genbank gene 36986 38557 . - . ID=gene-PUW34_00170;Name=PUW34_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00170 CP118122.1 Protein Homology CDS 36986 38557 . - 0 ID=cds-WJG97065.1;Parent=gene-PUW34_00170;Dbxref=NCBI_GP:WJG97065.1;Name=WJG97065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=PUW34_00170;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WJG97065.1;transl_table=11 CP118122.1 Genbank gene 38656 39417 . - . ID=gene-PUW34_00175;Name=PUW34_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00175 CP118122.1 Protein Homology CDS 38656 39417 . - 0 ID=cds-WJG97066.1;Parent=gene-PUW34_00175;Dbxref=NCBI_GP:WJG97066.1;Name=WJG97066.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=PUW34_00175;product=outer membrane protein OmpK;protein_id=WJG97066.1;transl_table=11 CP118122.1 Genbank pseudogene 40035 41502 . + . ID=gene-PUW34_00180;Name=PUW34_00180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00180;pseudo=true CP118122.1 Protein Homology CDS 40035 41502 . + 0 ID=cds-PUW34_00180;Parent=gene-PUW34_00180;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: protein motif:HMM:NF013080.2;locus_tag=PUW34_00180;product=sulfatase-like hydrolase/transferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 41601 42791 . + . ID=gene-PUW34_00185;Name=PUW34_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00185 CP118122.1 Protein Homology CDS 41601 42791 . + 0 ID=cds-WJG97067.1;Parent=gene-PUW34_00185;Dbxref=NCBI_GP:WJG97067.1;Name=WJG97067.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=PUW34_00185;product=anaerobic sulfatase maturase;protein_id=WJG97067.1;transl_table=11 CP118122.1 Genbank gene 42810 44063 . + . ID=gene-PUW34_00190;Name=PUW34_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00190 CP118122.1 Protein Homology CDS 42810 44063 . + 0 ID=cds-WJG97068.1;Parent=gene-PUW34_00190;Dbxref=NCBI_GP:WJG97068.1;Name=WJG97068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=PUW34_00190;product=cytoplasmic protein;protein_id=WJG97068.1;transl_table=11 CP118122.1 Genbank gene 44190 45905 . + . ID=gene-PUW34_00195;Name=PUW34_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00195 CP118122.1 Protein Homology CDS 44190 45905 . + 0 ID=cds-WJG97069.1;Parent=gene-PUW34_00195;Dbxref=NCBI_GP:WJG97069.1;Name=WJG97069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=PUW34_00195;product=aryl-sulfate sulfotransferase;protein_id=WJG97069.1;transl_table=11 CP118122.1 Genbank gene 46068 47234 . + . ID=gene-PUW34_00200;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=PUW34_00200 CP118122.1 Protein Homology CDS 46068 47234 . + 0 ID=cds-WJG97070.1;Parent=gene-PUW34_00200;Dbxref=NCBI_GP:WJG97070.1;Name=WJG97070.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=PUW34_00200;product=Na+/H+ antiporter NhaA;protein_id=WJG97070.1;transl_table=11 CP118122.1 Genbank gene 47296 48195 . + . ID=gene-PUW34_00205;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=PUW34_00205 CP118122.1 Protein Homology CDS 47296 48195 . + 0 ID=cds-WJG97071.1;Parent=gene-PUW34_00205;Dbxref=NCBI_GP:WJG97071.1;Name=WJG97071.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=PUW34_00205;product=transcriptional activator NhaR;protein_id=WJG97071.1;transl_table=11 CP118122.1 Genbank gene 48250 50289 . - . ID=gene-PUW34_00210;Name=PUW34_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00210 CP118122.1 Protein Homology CDS 48250 50289 . - 0 ID=cds-WJG97072.1;Parent=gene-PUW34_00210;Dbxref=NCBI_GP:WJG97072.1;Name=WJG97072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=PUW34_00210;product=glycoside hydrolase family 31 protein;protein_id=WJG97072.1;transl_table=11 CP118122.1 Genbank pseudogene 50329 51701 . - . ID=gene-PUW34_00215;Name=PUW34_00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00215;pseudo=true CP118122.1 Protein Homology CDS 50329 51701 . - 0 ID=cds-PUW34_00215;Parent=gene-PUW34_00215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=PUW34_00215;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 52157 52420 . - . ID=gene-PUW34_00220;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=PUW34_00220 CP118122.1 Protein Homology CDS 52157 52420 . - 0 ID=cds-WJG97073.1;Parent=gene-PUW34_00220;Dbxref=NCBI_GP:WJG97073.1;Name=WJG97073.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=PUW34_00220;product=30S ribosomal protein S20;protein_id=WJG97073.1;transl_table=11 CP118122.1 Genbank gene 52526 52741 . + . ID=gene-PUW34_00225;Name=PUW34_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00225 CP118122.1 Protein Homology CDS 52526 52741 . + 0 ID=cds-WJG97074.1;Parent=gene-PUW34_00225;Dbxref=NCBI_GP:WJG97074.1;Name=WJG97074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=PUW34_00225;product=YaaY family protein;protein_id=WJG97074.1;transl_table=11 CP118122.1 Genbank gene 52749 53687 . + . ID=gene-PUW34_00230;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=PUW34_00230 CP118122.1 Protein Homology CDS 52749 53687 . + 0 ID=cds-WJG97075.1;Parent=gene-PUW34_00230;Dbxref=NCBI_GP:WJG97075.1;Name=WJG97075.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=PUW34_00230;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WJG97075.1;transl_table=11 CP118122.1 Genbank gene 53732 56566 . + . ID=gene-PUW34_00235;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=PUW34_00235 CP118122.1 Protein Homology CDS 53732 56566 . + 0 ID=cds-WJG97076.1;Parent=gene-PUW34_00235;Dbxref=NCBI_GP:WJG97076.1;Name=WJG97076.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=PUW34_00235;product=isoleucine--tRNA ligase;protein_id=WJG97076.1;transl_table=11 CP118122.1 Genbank gene 56566 57066 . + . ID=gene-PUW34_00240;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=PUW34_00240 CP118122.1 Protein Homology CDS 56566 57066 . + 0 ID=cds-WJG97077.1;Parent=gene-PUW34_00240;Dbxref=NCBI_GP:WJG97077.1;Name=WJG97077.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=PUW34_00240;product=signal peptidase II;protein_id=WJG97077.1;transl_table=11 CP118122.1 Genbank gene 57221 57670 . + . ID=gene-PUW34_00245;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=PUW34_00245 CP118122.1 Protein Homology CDS 57221 57670 . + 0 ID=cds-WJG97078.1;Parent=gene-PUW34_00245;Dbxref=NCBI_GP:WJG97078.1;Name=WJG97078.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=PUW34_00245;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJG97078.1;transl_table=11 CP118122.1 Genbank gene 57673 58623 . + . ID=gene-PUW34_00250;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=PUW34_00250 CP118122.1 Protein Homology CDS 57673 58623 . + 0 ID=cds-WJG97079.1;Parent=gene-PUW34_00250;Dbxref=NCBI_GP:WJG97079.1;Name=WJG97079.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=PUW34_00250;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WJG97079.1;transl_table=11 CP118122.1 Genbank gene 58823 60025 . + . ID=gene-PUW34_00255;Name=PUW34_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00255 CP118122.1 Protein Homology CDS 58823 60025 . + 0 ID=cds-WJG97080.1;Parent=gene-PUW34_00255;Dbxref=NCBI_GP:WJG97080.1;Name=WJG97080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=PUW34_00255;product=nitrite reductase;protein_id=WJG97080.1;transl_table=11 CP118122.1 Genbank pseudogene 60041 60960 . + . ID=gene-PUW34_00260;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=pseudogene;locus_tag=PUW34_00260;pseudo=true CP118122.1 Protein Homology CDS 60041 60960 . + 0 ID=cds-PUW34_00260;Parent=gene-PUW34_00260;Note=frameshifted;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=PUW34_00260;product=ribonucleoside hydrolase RihC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 60982 61665 . - . ID=gene-PUW34_00265;Name=PUW34_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00265 CP118122.1 Protein Homology CDS 60982 61665 . - 0 ID=cds-WJG97081.1;Parent=gene-PUW34_00265;Dbxref=NCBI_GP:WJG97081.1;Name=WJG97081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=PUW34_00265;product=response regulator;protein_id=WJG97081.1;transl_table=11 CP118122.1 Genbank gene 61667 63286 . - . ID=gene-PUW34_00270;Name=PUW34_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00270 CP118122.1 Protein Homology CDS 61667 63286 . - 0 ID=cds-WJG99078.1;Parent=gene-PUW34_00270;Dbxref=NCBI_GP:WJG99078.1;Name=WJG99078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=PUW34_00270;product=sensor histidine kinase;protein_id=WJG99078.1;transl_table=11 CP118122.1 Genbank pseudogene 63421 64721 . - . ID=gene-PUW34_00275;Name=PUW34_00275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00275;pseudo=true CP118122.1 Protein Homology CDS 63421 64721 . - 0 ID=cds-PUW34_00275;Parent=gene-PUW34_00275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW34_00275;product=oxalacetate decarboxylase subunit beta;pseudo=true;transl_table=11 CP118122.1 Genbank gene 64734 66506 . - . ID=gene-PUW34_00280;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW34_00280 CP118122.1 Protein Homology CDS 64734 66506 . - 0 ID=cds-WJG97082.1;Parent=gene-PUW34_00280;Dbxref=NCBI_GP:WJG97082.1;Name=WJG97082.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW34_00280;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJG97082.1;transl_table=11 CP118122.1 Genbank gene 66523 66762 . - . ID=gene-PUW34_00285;Name=PUW34_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00285 CP118122.1 Protein Homology CDS 66523 66762 . - 0 ID=cds-WJG97083.1;Parent=gene-PUW34_00285;Dbxref=NCBI_GP:WJG97083.1;Name=WJG97083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=PUW34_00285;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJG97083.1;transl_table=11 CP118122.1 Genbank pseudogene 66921 68259 . - . ID=gene-PUW34_00290;Name=citS;gbkey=Gene;gene=citS;gene_biotype=pseudogene;locus_tag=PUW34_00290;pseudo=true CP118122.1 Protein Homology CDS 66921 68259 . - 0 ID=cds-PUW34_00290;Parent=gene-PUW34_00290;Note=frameshifted;gbkey=CDS;gene=citS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=PUW34_00290;product=citrate/sodium symporter CitS;pseudo=true;transl_table=11 CP118122.1 Genbank gene 68504 69547 . + . ID=gene-PUW34_00295;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PUW34_00295 CP118122.1 Protein Homology CDS 68504 69547 . + 0 ID=cds-WJG97084.1;Parent=gene-PUW34_00295;Dbxref=NCBI_GP:WJG97084.1;Name=WJG97084.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=PUW34_00295;product=[citrate (pro-3S)-lyase] ligase;protein_id=WJG97084.1;transl_table=11 CP118122.1 Genbank gene 69577 69870 . + . ID=gene-PUW34_00300;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PUW34_00300 CP118122.1 Protein Homology CDS 69577 69870 . + 0 ID=cds-WJG97085.1;Parent=gene-PUW34_00300;Dbxref=NCBI_GP:WJG97085.1;Name=WJG97085.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=PUW34_00300;product=citrate lyase acyl carrier protein;protein_id=WJG97085.1;transl_table=11 CP118122.1 Genbank gene 69867 70736 . + . ID=gene-PUW34_00305;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PUW34_00305 CP118122.1 Protein Homology CDS 69867 70736 . + 0 ID=cds-WJG97086.1;Parent=gene-PUW34_00305;Dbxref=NCBI_GP:WJG97086.1;Name=WJG97086.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=PUW34_00305;product=citrate (pro-3S)-lyase subunit beta;protein_id=WJG97086.1;transl_table=11 CP118122.1 Genbank gene 70747 72267 . + . ID=gene-PUW34_00310;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PUW34_00310 CP118122.1 Protein Homology CDS 70747 72267 . + 0 ID=cds-WJG97087.1;Parent=gene-PUW34_00310;Dbxref=NCBI_GP:WJG97087.1;Name=WJG97087.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=PUW34_00310;product=citrate lyase subunit alpha;protein_id=WJG97087.1;transl_table=11 CP118122.1 Genbank gene 72267 72818 . + . ID=gene-PUW34_00315;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PUW34_00315 CP118122.1 Protein Homology CDS 72267 72818 . + 0 ID=cds-WJG97088.1;Parent=gene-PUW34_00315;Dbxref=NCBI_GP:WJG97088.1;Name=WJG97088.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=PUW34_00315;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WJG97088.1;transl_table=11 CP118122.1 Genbank gene 72796 73704 . + . ID=gene-PUW34_00320;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PUW34_00320 CP118122.1 Protein Homology CDS 72796 73704 . + 0 ID=cds-WJG97089.1;Parent=gene-PUW34_00320;Dbxref=NCBI_GP:WJG97089.1;Name=WJG97089.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=citG;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=PUW34_00320;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WJG97089.1;transl_table=11 CP118122.1 Genbank gene 73884 74705 . + . ID=gene-PUW34_00325;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=PUW34_00325 CP118122.1 Protein Homology CDS 73884 74705 . + 0 ID=cds-WJG97090.1;Parent=gene-PUW34_00325;Dbxref=NCBI_GP:WJG97090.1;Name=WJG97090.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=PUW34_00325;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WJG97090.1;transl_table=11 CP118122.1 Genbank pseudogene 75568 76715 . + . ID=gene-PUW34_00330;Name=carA;gbkey=Gene;gene=carA;gene_biotype=pseudogene;locus_tag=PUW34_00330;pseudo=true CP118122.1 Protein Homology CDS 75568 76715 . + 0 ID=cds-PUW34_00330;Parent=gene-PUW34_00330;Note=frameshifted;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=PUW34_00330;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;pseudo=true;transl_table=11 CP118122.1 Genbank gene 76734 79961 . + . ID=gene-PUW34_00335;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=PUW34_00335 CP118122.1 Protein Homology CDS 76734 79961 . + 0 ID=cds-WJG97091.1;Parent=gene-PUW34_00335;Dbxref=NCBI_GP:WJG97091.1;Name=WJG97091.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=PUW34_00335;product=carbamoyl-phosphate synthase large subunit;protein_id=WJG97091.1;transl_table=11 CP118122.1 Genbank gene 80235 80630 . + . ID=gene-PUW34_00340;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=PUW34_00340 CP118122.1 Protein Homology CDS 80235 80630 . + 0 ID=cds-WJG97092.1;Parent=gene-PUW34_00340;Dbxref=NCBI_GP:WJG97092.1;Name=WJG97092.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=PUW34_00340;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WJG97092.1;transl_table=11 CP118122.1 Genbank gene 80708 81304 . - . ID=gene-PUW34_00345;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=PUW34_00345 CP118122.1 Protein Homology CDS 80708 81304 . - 0 ID=cds-WJG97093.1;Parent=gene-PUW34_00345;Dbxref=NCBI_GP:WJG97093.1;Name=WJG97093.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=PUW34_00345;product=carnitine operon protein CaiE;protein_id=WJG97093.1;transl_table=11 CP118122.1 Genbank gene 81414 82199 . - . ID=gene-PUW34_00350;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=PUW34_00350 CP118122.1 Protein Homology CDS 81414 82199 . - 0 ID=cds-WJG97094.1;Parent=gene-PUW34_00350;Dbxref=NCBI_GP:WJG97094.1;Name=WJG97094.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=PUW34_00350;product=crotonobetainyl-CoA hydratase;protein_id=WJG97094.1;transl_table=11 CP118122.1 Genbank pseudogene 82253 83806 . - . ID=gene-PUW34_00355;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=pseudogene;locus_tag=PUW34_00355;pseudo=true CP118122.1 Protein Homology CDS 82253 83806 . - 0 ID=cds-PUW34_00355;Parent=gene-PUW34_00355;Note=internal stop;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=PUW34_00355;product=crotonobetaine/carnitine-CoA ligase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 83869 85086 . - . ID=gene-PUW34_00360;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=PUW34_00360 CP118122.1 Protein Homology CDS 83869 85086 . - 0 ID=cds-WJG99079.1;Parent=gene-PUW34_00360;Dbxref=NCBI_GP:WJG99079.1;Name=WJG99079.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=PUW34_00360;product=L-carnitine CoA-transferase;protein_id=WJG99079.1;transl_table=11 CP118122.1 Genbank gene 85198 86340 . - . ID=gene-PUW34_00365;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=PUW34_00365 CP118122.1 Protein Homology CDS 85198 86340 . - 0 ID=cds-WJG97095.1;Parent=gene-PUW34_00365;Dbxref=NCBI_GP:WJG97095.1;Name=WJG97095.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=PUW34_00365;product=crotonobetainyl-CoA dehydrogenase;protein_id=WJG97095.1;transl_table=11 CP118122.1 Genbank gene 86375 87892 . - . ID=gene-PUW34_00370;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=PUW34_00370 CP118122.1 Protein Homology CDS 86375 87892 . - 0 ID=cds-WJG97096.1;Parent=gene-PUW34_00370;Dbxref=NCBI_GP:WJG97096.1;Name=WJG97096.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=PUW34_00370;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WJG97096.1;transl_table=11 CP118122.1 Genbank gene 88373 89143 . + . ID=gene-PUW34_00375;Name=PUW34_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00375 CP118122.1 Protein Homology CDS 88373 89143 . + 0 ID=cds-WJG97097.1;Parent=gene-PUW34_00375;Dbxref=NCBI_GP:WJG97097.1;Name=WJG97097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=PUW34_00375;product=electron transfer flavoprotein FixA;protein_id=WJG97097.1;transl_table=11 CP118122.1 Genbank gene 89159 90100 . + . ID=gene-PUW34_00380;Name=PUW34_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00380 CP118122.1 Protein Homology CDS 89159 90100 . + 0 ID=cds-WJG97098.1;Parent=gene-PUW34_00380;Dbxref=NCBI_GP:WJG97098.1;Name=WJG97098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=PUW34_00380;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WJG97098.1;transl_table=11 CP118122.1 Genbank gene 90150 91436 . + . ID=gene-PUW34_00385;Name=PUW34_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00385 CP118122.1 Protein Homology CDS 90150 91436 . + 0 ID=cds-WJG97099.1;Parent=gene-PUW34_00385;Dbxref=NCBI_GP:WJG97099.1;Name=WJG97099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=PUW34_00385;product=FAD-dependent oxidoreductase;protein_id=WJG97099.1;transl_table=11 CP118122.1 Genbank pseudogene 91433 91719 . + . ID=gene-PUW34_00390;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=pseudogene;locus_tag=PUW34_00390;pseudo=true CP118122.1 Protein Homology CDS 91433 91719 . + 0 ID=cds-PUW34_00390;Parent=gene-PUW34_00390;Note=frameshifted;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=PUW34_00390;product=ferredoxin-like protein FixX;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 91866 93205 . + . ID=gene-PUW34_00395;Name=PUW34_00395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00395;pseudo=true CP118122.1 Protein Homology CDS 91866 93205 . + 0 ID=cds-PUW34_00395;Parent=gene-PUW34_00395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746786.1;locus_tag=PUW34_00395;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 93294 93524 . + . ID=gene-PUW34_00400;Name=PUW34_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00400 CP118122.1 Protein Homology CDS 93294 93524 . + 0 ID=cds-WJG97100.1;Parent=gene-PUW34_00400;Dbxref=NCBI_GP:WJG97100.1;Name=WJG97100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=PUW34_00400;product=YgdI/YgdR family lipoprotein;protein_id=WJG97100.1;transl_table=11 CP118122.1 Genbank pseudogene 93816 94231 . + . ID=gene-PUW34_00405;Name=PUW34_00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00405;pseudo=true CP118122.1 Protein Homology CDS 93816 94231 . + 0 ID=cds-PUW34_00405;Parent=gene-PUW34_00405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=PUW34_00405;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 94455 94745 . - . ID=gene-PUW34_00410;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=PUW34_00410 CP118122.1 Protein Homology CDS 94455 94745 . - 0 ID=cds-WJG97101.1;Parent=gene-PUW34_00410;Dbxref=NCBI_GP:WJG97101.1;Name=WJG97101.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=PUW34_00410;product=DUF1471 family virulence protein SrfN;protein_id=WJG97101.1;transl_table=11 CP118122.1 Genbank gene 95643 97532 . + . ID=gene-PUW34_00415;Name=PUW34_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00415 CP118122.1 Protein Homology CDS 95643 97532 . + 0 ID=cds-WJG97102.1;Parent=gene-PUW34_00415;Dbxref=NCBI_GP:WJG97102.1;Name=WJG97102.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=PUW34_00415;product=sulfatase-like hydrolase/transferase;protein_id=WJG97102.1;transl_table=11 CP118122.1 Genbank gene 97939 98469 . + . ID=gene-PUW34_00420;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=PUW34_00420 CP118122.1 Protein Homology CDS 97939 98469 . + 0 ID=cds-WJG97103.1;Parent=gene-PUW34_00420;Dbxref=NCBI_GP:WJG97103.1;Name=WJG97103.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=PUW34_00420;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WJG97103.1;transl_table=11 CP118122.1 Genbank gene 98462 100330 . + . ID=gene-PUW34_00425;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=PUW34_00425 CP118122.1 Protein Homology CDS 98462 100330 . + 0 ID=cds-WJG97104.1;Parent=gene-PUW34_00425;Dbxref=NCBI_GP:WJG97104.1;Name=WJG97104.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=PUW34_00425;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WJG97104.1;transl_table=11 CP118122.1 Genbank gene 100529 101008 . + . ID=gene-PUW34_00430;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=PUW34_00430 CP118122.1 Protein Homology CDS 100529 101008 . + 0 ID=cds-WJG97105.1;Parent=gene-PUW34_00430;Dbxref=NCBI_GP:WJG97105.1;Name=WJG97105.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=PUW34_00430;product=type 3 dihydrofolate reductase;protein_id=WJG97105.1;transl_table=11 CP118122.1 Genbank gene 101114 101962 . - . ID=gene-PUW34_00435;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=PUW34_00435 CP118122.1 Protein Homology CDS 101114 101962 . - 0 ID=cds-WJG97106.1;Parent=gene-PUW34_00435;Dbxref=NCBI_GP:WJG97106.1;Name=WJG97106.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=PUW34_00435;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WJG97106.1;transl_table=11 CP118122.1 Genbank gene 101973 102350 . - . ID=gene-PUW34_00440;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=PUW34_00440 CP118122.1 Protein Homology CDS 101973 102350 . - 0 ID=cds-WJG97107.1;Parent=gene-PUW34_00440;Dbxref=NCBI_GP:WJG97107.1;Name=WJG97107.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=PUW34_00440;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WJG97107.1;transl_table=11 CP118122.1 Genbank gene 102353 103174 . - . ID=gene-PUW34_00445;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=PUW34_00445 CP118122.1 Protein Homology CDS 102353 103174 . - 0 ID=cds-WJG97108.1;Parent=gene-PUW34_00445;Dbxref=NCBI_GP:WJG97108.1;Name=WJG97108.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=PUW34_00445;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WJG97108.1;transl_table=11 CP118122.1 Genbank gene 103171 104160 . - . ID=gene-PUW34_00450;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=PUW34_00450 CP118122.1 Protein Homology CDS 103171 104160 . - 0 ID=cds-WJG97109.1;Parent=gene-PUW34_00450;Dbxref=NCBI_GP:WJG97109.1;Name=WJG97109.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=PUW34_00450;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WJG97109.1;transl_table=11 CP118122.1 Genbank gene 104160 105446 . - . ID=gene-PUW34_00455;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=PUW34_00455 CP118122.1 Protein Homology CDS 104160 105446 . - 0 ID=cds-WJG97110.1;Parent=gene-PUW34_00455;Dbxref=NCBI_GP:WJG97110.1;Name=WJG97110.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=PUW34_00455;product=peptidylprolyl isomerase SurA;protein_id=WJG97110.1;transl_table=11 CP118122.1 Genbank gene 105500 107860 . - . ID=gene-PUW34_00460;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=PUW34_00460 CP118122.1 Protein Homology CDS 105500 107860 . - 0 ID=cds-WJG97111.1;Parent=gene-PUW34_00460;Dbxref=NCBI_GP:WJG97111.1;Name=WJG97111.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=PUW34_00460;product=LPS assembly protein LptD;protein_id=WJG97111.1;transl_table=11 CP118122.1 Genbank gene 108114 108926 . + . ID=gene-PUW34_00465;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=PUW34_00465 CP118122.1 Protein Homology CDS 108114 108926 . + 0 ID=cds-WJG97112.1;Parent=gene-PUW34_00465;Dbxref=NCBI_GP:WJG97112.1;Name=WJG97112.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=PUW34_00465;product=co-chaperone DjlA;protein_id=WJG97112.1;transl_table=11 CP118122.1 Genbank gene 109021 109680 . - . ID=gene-PUW34_00470;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=PUW34_00470 CP118122.1 Protein Homology CDS 109021 109680 . - 0 ID=cds-WJG97113.1;Parent=gene-PUW34_00470;Dbxref=NCBI_GP:WJG97113.1;Name=WJG97113.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=PUW34_00470;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WJG97113.1;transl_table=11 CP118122.1 Genbank gene 109692 112598 . - . ID=gene-PUW34_00475;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=PUW34_00475 CP118122.1 Protein Homology CDS 109692 112598 . - 0 ID=cds-WJG97114.1;Parent=gene-PUW34_00475;Dbxref=NCBI_GP:WJG97114.1;Name=WJG97114.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=PUW34_00475;product=RNA polymerase-associated protein RapA;protein_id=WJG97114.1;transl_table=11 CP118122.1 Genbank pseudogene 112772 115122 . - . ID=gene-PUW34_00480;Name=polB;gbkey=Gene;gene=polB;gene_biotype=pseudogene;locus_tag=PUW34_00480;pseudo=true CP118122.1 Protein Homology CDS 112772 115122 . - 0 ID=cds-PUW34_00480;Parent=gene-PUW34_00480;Note=frameshifted;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=PUW34_00480;product=DNA polymerase II;pseudo=true;transl_table=11 CP118122.1 Genbank gene 115166 115786 . - . ID=gene-PUW34_00485;Name=PUW34_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00485 CP118122.1 Protein Homology CDS 115166 115786 . - 0 ID=cds-WJG97115.1;Parent=gene-PUW34_00485;Dbxref=NCBI_GP:WJG97115.1;Name=WJG97115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=PUW34_00485;product=YdcF family protein;protein_id=WJG97115.1;transl_table=11 CP118122.1 Genbank gene 116304 116723 . + . ID=gene-PUW34_00490;Name=PUW34_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00490 CP118122.1 Protein Homology CDS 116304 116723 . + 0 ID=cds-WJG97116.1;Parent=gene-PUW34_00490;Dbxref=NCBI_GP:WJG97116.1;Name=WJG97116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=PUW34_00490;product=DUF4751 family protein;protein_id=WJG97116.1;transl_table=11 CP118122.1 Genbank gene 116729 117424 . - . ID=gene-PUW34_00495;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PUW34_00495 CP118122.1 Protein Homology CDS 116729 117424 . - 0 ID=cds-WJG97117.1;Parent=gene-PUW34_00495;Dbxref=NCBI_GP:WJG97117.1;Name=WJG97117.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=PUW34_00495;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJG97117.1;transl_table=11 CP118122.1 Genbank gene 117565 119067 . - . ID=gene-PUW34_00500;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=PUW34_00500 CP118122.1 Protein Homology CDS 117565 119067 . - 0 ID=cds-WJG97118.1;Parent=gene-PUW34_00500;Dbxref=NCBI_GP:WJG97118.1;Name=WJG97118.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=PUW34_00500;product=L-arabinose isomerase;protein_id=WJG97118.1;transl_table=11 CP118122.1 Genbank gene 119078 120787 . - . ID=gene-PUW34_00505;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=PUW34_00505 CP118122.1 Protein Homology CDS 119078 120787 . - 0 ID=cds-WJG97119.1;Parent=gene-PUW34_00505;Dbxref=NCBI_GP:WJG97119.1;Name=WJG97119.1;Ontology_term=GO:0019568,GO:0008741;gbkey=CDS;gene=araB;go_function=ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=PUW34_00505;product=ribulokinase;protein_id=WJG97119.1;transl_table=11 CP118122.1 Genbank gene 121126 121971 . + . ID=gene-PUW34_00510;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=PUW34_00510 CP118122.1 Protein Homology CDS 121126 121971 . + 0 ID=cds-WJG97120.1;Parent=gene-PUW34_00510;Dbxref=NCBI_GP:WJG97120.1;Name=WJG97120.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=PUW34_00510;product=arabinose operon transcriptional regulator AraC;protein_id=WJG97120.1;transl_table=11 CP118122.1 Genbank gene 122090 122857 . + . ID=gene-PUW34_00515;Name=PUW34_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00515 CP118122.1 Protein Homology CDS 122090 122857 . + 0 ID=cds-WJG97121.1;Parent=gene-PUW34_00515;Dbxref=NCBI_GP:WJG97121.1;Name=WJG97121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=PUW34_00515;product=DedA family protein;protein_id=WJG97121.1;transl_table=11 CP118122.1 Genbank gene 122896 123603 . - . ID=gene-PUW34_00520;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=PUW34_00520 CP118122.1 Protein Homology CDS 122896 123603 . - 0 ID=cds-WJG97122.1;Parent=gene-PUW34_00520;Dbxref=NCBI_GP:WJG97122.1;Name=WJG97122.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=PUW34_00520;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WJG97122.1;transl_table=11 CP118122.1 Genbank gene 123587 125197 . - . ID=gene-PUW34_00525;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=PUW34_00525 CP118122.1 Protein Homology CDS 123587 125197 . - 0 ID=cds-WJG97123.1;Parent=gene-PUW34_00525;Dbxref=NCBI_GP:WJG97123.1;Name=WJG97123.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=PUW34_00525;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WJG97123.1;transl_table=11 CP118122.1 Genbank gene 125173 126156 . - . ID=gene-PUW34_00530;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=PUW34_00530 CP118122.1 Protein Homology CDS 125173 126156 . - 0 ID=cds-WJG97124.1;Parent=gene-PUW34_00530;Dbxref=NCBI_GP:WJG97124.1;Name=WJG97124.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=PUW34_00530;product=thiamine ABC transporter substrate binding subunit;protein_id=WJG97124.1;transl_table=11 CP118122.1 cmsearch riboswitch 126188 126287 . - . ID=id-CP118122.1:126188..126287;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118122.1 Genbank gene 126334 127992 . - . ID=gene-PUW34_00535;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=PUW34_00535 CP118122.1 Protein Homology CDS 126334 127992 . - 0 ID=cds-WJG97125.1;Parent=gene-PUW34_00535;Dbxref=NCBI_GP:WJG97125.1;Name=WJG97125.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=PUW34_00535;product=HTH-type transcriptional regulator SgrR;protein_id=WJG97125.1;transl_table=11 CP118122.1 Genbank gene 128085 128207 . + . ID=gene-PUW34_00540;Name=PUW34_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00540 CP118122.1 Protein Homology CDS 128085 128207 . + 0 ID=cds-WJG98884.1;Parent=gene-PUW34_00540;Dbxref=NCBI_GP:WJG98884.1;Name=WJG98884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=PUW34_00540;product=glucose uptake inhibitor SgrT;protein_id=WJG98884.1;transl_table=11 CP118122.1 Genbank gene 128527 128808 . + . ID=gene-PUW34_00545;Name=PUW34_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00545 CP118122.1 Protein Homology CDS 128527 128808 . + 0 ID=cds-WJG97126.1;Parent=gene-PUW34_00545;Dbxref=NCBI_GP:WJG97126.1;Name=WJG97126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264185.1;locus_tag=PUW34_00545;product=DUF5339 family protein;protein_id=WJG97126.1;transl_table=11 CP118122.1 Genbank gene 128862 129467 . - . ID=gene-PUW34_00550;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PUW34_00550 CP118122.1 Protein Homology CDS 128862 129467 . - 0 ID=cds-WJG97127.1;Parent=gene-PUW34_00550;Dbxref=NCBI_GP:WJG97127.1;Name=WJG97127.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=PUW34_00550;product=3-isopropylmalate dehydratase small subunit;protein_id=WJG97127.1;transl_table=11 CP118122.1 Genbank gene 129478 130878 . - . ID=gene-PUW34_00555;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PUW34_00555 CP118122.1 Protein Homology CDS 129478 130878 . - 0 ID=cds-WJG97128.1;Parent=gene-PUW34_00555;Dbxref=NCBI_GP:WJG97128.1;Name=WJG97128.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=PUW34_00555;product=3-isopropylmalate dehydratase large subunit;protein_id=WJG97128.1;transl_table=11 CP118122.1 Genbank gene 130881 131972 . - . ID=gene-PUW34_00560;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=PUW34_00560 CP118122.1 Protein Homology CDS 130881 131972 . - 0 ID=cds-WJG97129.1;Parent=gene-PUW34_00560;Dbxref=NCBI_GP:WJG97129.1;Name=WJG97129.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=PUW34_00560;product=3-isopropylmalate dehydrogenase;protein_id=WJG97129.1;transl_table=11 CP118122.1 Genbank gene 131972 133543 . - . ID=gene-PUW34_00565;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=PUW34_00565 CP118122.1 Protein Homology CDS 131972 133543 . - 0 ID=cds-WJG97130.1;Parent=gene-PUW34_00565;Dbxref=NCBI_GP:WJG97130.1;Name=WJG97130.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=PUW34_00565;product=2-isopropylmalate synthase;protein_id=WJG97130.1;transl_table=11 CP118122.1 Genbank gene 133631 133717 . - . ID=gene-PUW34_00570;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=PUW34_00570 CP118122.1 Protein Homology CDS 133631 133717 . - 0 ID=cds-WJG98885.1;Parent=gene-PUW34_00570;Dbxref=NCBI_GP:WJG98885.1;Name=WJG98885.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=PUW34_00570;product=leu operon leader peptide;protein_id=WJG98885.1;transl_table=11 CP118122.1 Genbank gene 134384 135328 . + . ID=gene-PUW34_00575;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=PUW34_00575 CP118122.1 Protein Homology CDS 134384 135328 . + 0 ID=cds-WJG97131.1;Parent=gene-PUW34_00575;Dbxref=NCBI_GP:WJG97131.1;Name=WJG97131.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=PUW34_00575;product=transcriptional regulator LeuO;protein_id=WJG97131.1;transl_table=11 CP118122.1 Genbank gene 135650 137374 . + . ID=gene-PUW34_00580;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=PUW34_00580 CP118122.1 Protein Homology CDS 135650 137374 . + 0 ID=cds-WJG97132.1;Parent=gene-PUW34_00580;Dbxref=NCBI_GP:WJG97132.1;Name=WJG97132.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=PUW34_00580;product=acetolactate synthase 3 large subunit;protein_id=WJG97132.1;transl_table=11 CP118122.1 Genbank gene 137377 137868 . + . ID=gene-PUW34_00585;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PUW34_00585 CP118122.1 Protein Homology CDS 137377 137868 . + 0 ID=cds-WJG98886.1;Parent=gene-PUW34_00585;Dbxref=NCBI_GP:WJG98886.1;Name=WJG98886.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=PUW34_00585;product=acetolactate synthase small subunit;protein_id=WJG98886.1;transl_table=11 CP118122.1 Genbank gene 138152 139156 . + . ID=gene-PUW34_00590;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=PUW34_00590 CP118122.1 Protein Homology CDS 138152 139156 . + 0 ID=cds-WJG97133.1;Parent=gene-PUW34_00590;Dbxref=NCBI_GP:WJG97133.1;Name=WJG97133.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=PUW34_00590;product=catabolite repressor/activator;protein_id=WJG97133.1;transl_table=11 CP118122.1 Genbank gene 139762 140220 . + . ID=gene-PUW34_00595;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=PUW34_00595 CP118122.1 Protein Homology CDS 139762 140220 . + 0 ID=cds-WJG97134.1;Parent=gene-PUW34_00595;Dbxref=NCBI_GP:WJG97134.1;Name=WJG97134.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=PUW34_00595;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WJG97134.1;transl_table=11 CP118122.1 Genbank gene 140222 141163 . + . ID=gene-PUW34_00600;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=PUW34_00600 CP118122.1 Protein Homology CDS 140222 141163 . + 0 ID=cds-WJG97135.1;Parent=gene-PUW34_00600;Dbxref=NCBI_GP:WJG97135.1;Name=WJG97135.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=PUW34_00600;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WJG97135.1;transl_table=11 CP118122.1 Genbank gene 141160 141525 . + . ID=gene-PUW34_00605;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=PUW34_00605 CP118122.1 Protein Homology CDS 141160 141525 . + 0 ID=cds-WJG97136.1;Parent=gene-PUW34_00605;Dbxref=NCBI_GP:WJG97136.1;Name=WJG97136.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=PUW34_00605;product=cell division protein FtsL;protein_id=WJG97136.1;transl_table=11 CP118122.1 Genbank gene 141541 143307 . + . ID=gene-PUW34_00610;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=PUW34_00610 CP118122.1 Protein Homology CDS 141541 143307 . + 0 ID=cds-WJG97137.1;Parent=gene-PUW34_00610;Dbxref=NCBI_GP:WJG97137.1;Name=WJG97137.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=PUW34_00610;product=peptidoglycan glycosyltransferase FtsI;protein_id=WJG97137.1;transl_table=11 CP118122.1 Genbank gene 143294 144781 . + . ID=gene-PUW34_00615;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=PUW34_00615 CP118122.1 Protein Homology CDS 143294 144781 . + 0 ID=cds-WJG97138.1;Parent=gene-PUW34_00615;Dbxref=NCBI_GP:WJG97138.1;Name=WJG97138.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=PUW34_00615;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WJG97138.1;transl_table=11 CP118122.1 Genbank gene 144778 146136 . + . ID=gene-PUW34_00620;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=PUW34_00620 CP118122.1 Protein Homology CDS 144778 146136 . + 0 ID=cds-WJG97139.1;Parent=gene-PUW34_00620;Dbxref=NCBI_GP:WJG97139.1;Name=WJG97139.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=PUW34_00620;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WJG97139.1;transl_table=11 CP118122.1 Genbank gene 146130 147212 . + . ID=gene-PUW34_00625;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=PUW34_00625 CP118122.1 Protein Homology CDS 146130 147212 . + 0 ID=cds-WJG97140.1;Parent=gene-PUW34_00625;Dbxref=NCBI_GP:WJG97140.1;Name=WJG97140.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=PUW34_00625;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WJG97140.1;transl_table=11 CP118122.1 Genbank gene 147215 148531 . + . ID=gene-PUW34_00630;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=PUW34_00630 CP118122.1 Protein Homology CDS 147215 148531 . + 0 ID=cds-WJG97141.1;Parent=gene-PUW34_00630;Dbxref=NCBI_GP:WJG97141.1;Name=WJG97141.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=PUW34_00630;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WJG97141.1;transl_table=11 CP118122.1 Genbank pseudogene 148531 149774 . + . ID=gene-PUW34_00635;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=pseudogene;locus_tag=PUW34_00635;pseudo=true CP118122.1 Protein Homology CDS 148531 149774 . + 0 ID=cds-PUW34_00635;Parent=gene-PUW34_00635;Note=frameshifted;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=PUW34_00635;product=cell division protein FtsW;pseudo=true;transl_table=11 CP118122.1 Genbank gene 149771 150838 . + . ID=gene-PUW34_00640;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=PUW34_00640 CP118122.1 Protein Homology CDS 149771 150838 . + 0 ID=cds-WJG97142.1;Parent=gene-PUW34_00640;Dbxref=NCBI_GP:WJG97142.1;Name=WJG97142.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=PUW34_00640;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WJG97142.1;transl_table=11 CP118122.1 Genbank gene 150957 152432 . + . ID=gene-PUW34_00645;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=PUW34_00645 CP118122.1 Protein Homology CDS 150957 152432 . + 0 ID=cds-WJG97143.1;Parent=gene-PUW34_00645;Dbxref=NCBI_GP:WJG97143.1;Name=WJG97143.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=PUW34_00645;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WJG97143.1;transl_table=11 CP118122.1 Genbank gene 152425 153345 . + . ID=gene-PUW34_00650;Name=PUW34_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00650 CP118122.1 Protein Homology CDS 152425 153345 . + 0 ID=cds-WJG97144.1;Parent=gene-PUW34_00650;Dbxref=NCBI_GP:WJG97144.1;Name=WJG97144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=PUW34_00650;product=D-alanine--D-alanine ligase;protein_id=WJG97144.1;transl_table=11 CP118122.1 Genbank gene 153347 154177 . + . ID=gene-PUW34_00655;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=PUW34_00655 CP118122.1 Protein Homology CDS 153347 154177 . + 0 ID=cds-WJG97145.1;Parent=gene-PUW34_00655;Dbxref=NCBI_GP:WJG97145.1;Name=WJG97145.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=PUW34_00655;product=cell division protein FtsQ;protein_id=WJG97145.1;transl_table=11 CP118122.1 Genbank gene 154174 155436 . + . ID=gene-PUW34_00660;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=PUW34_00660 CP118122.1 Protein Homology CDS 154174 155436 . + 0 ID=cds-WJG97146.1;Parent=gene-PUW34_00660;Dbxref=NCBI_GP:WJG97146.1;Name=WJG97146.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=PUW34_00660;product=cell division protein FtsA;protein_id=WJG97146.1;transl_table=11 CP118122.1 Genbank gene 155497 156648 . + . ID=gene-PUW34_00665;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=PUW34_00665 CP118122.1 Protein Homology CDS 155497 156648 . + 0 ID=cds-WJG97147.1;Parent=gene-PUW34_00665;Dbxref=NCBI_GP:WJG97147.1;Name=WJG97147.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=PUW34_00665;product=cell division protein FtsZ;protein_id=WJG97147.1;transl_table=11 CP118122.1 Genbank gene 156749 157666 . + . ID=gene-PUW34_00670;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=PUW34_00670 CP118122.1 Protein Homology CDS 156749 157666 . + 0 ID=cds-WJG97148.1;Parent=gene-PUW34_00670;Dbxref=NCBI_GP:WJG97148.1;Name=WJG97148.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=PUW34_00670;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WJG97148.1;transl_table=11 CP118122.1 Genbank gene 157945 158442 . + . ID=gene-PUW34_00675;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=PUW34_00675 CP118122.1 Protein Homology CDS 157945 158442 . + 0 ID=cds-WJG97149.1;Parent=gene-PUW34_00675;Dbxref=NCBI_GP:WJG97149.1;Name=WJG97149.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014335.1;locus_tag=PUW34_00675;product=secA translation cis-regulator SecM;protein_id=WJG97149.1;transl_table=11 CP118122.1 Genbank gene 158504 161209 . + . ID=gene-PUW34_00680;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=PUW34_00680 CP118122.1 Protein Homology CDS 158504 161209 . + 0 ID=cds-WJG97150.1;Parent=gene-PUW34_00680;Dbxref=NCBI_GP:WJG97150.1;Name=WJG97150.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=PUW34_00680;product=preprotein translocase subunit SecA;protein_id=WJG97150.1;transl_table=11 CP118122.1 Genbank gene 161361 161756 . + . ID=gene-PUW34_00685;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=PUW34_00685 CP118122.1 Protein Homology CDS 161361 161756 . + 0 ID=cds-WJG97151.1;Parent=gene-PUW34_00685;Dbxref=NCBI_GP:WJG97151.1;Name=WJG97151.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459142.1;locus_tag=PUW34_00685;product=8-oxo-dGTP diphosphatase MutT;protein_id=WJG97151.1;transl_table=11 CP118122.1 Genbank gene 161790 162779 . - . ID=gene-PUW34_00690;Name=PUW34_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00690 CP118122.1 Protein Homology CDS 161790 162779 . - 0 ID=cds-WJG97152.1;Parent=gene-PUW34_00690;Dbxref=NCBI_GP:WJG97152.1;Name=WJG97152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=PUW34_00690;product=aldo/keto reductase;protein_id=WJG97152.1;transl_table=11 CP118122.1 Genbank gene 162865 163806 . + . ID=gene-PUW34_00695;Name=PUW34_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00695 CP118122.1 Protein Homology CDS 162865 163806 . + 0 ID=cds-WJG97153.1;Parent=gene-PUW34_00695;Dbxref=NCBI_GP:WJG97153.1;Name=WJG97153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=PUW34_00695;product=LysR family transcriptional regulator;protein_id=WJG97153.1;transl_table=11 CP118122.1 Genbank gene 163803 163994 . - . ID=gene-PUW34_00700;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=PUW34_00700 CP118122.1 Protein Homology CDS 163803 163994 . - 0 ID=cds-WJG97154.1;Parent=gene-PUW34_00700;Dbxref=NCBI_GP:WJG97154.1;Name=WJG97154.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=PUW34_00700;product=DNA gyrase inhibitor YacG;protein_id=WJG97154.1;transl_table=11 CP118122.1 Genbank gene 164004 164747 . - . ID=gene-PUW34_00705;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=PUW34_00705 CP118122.1 Protein Homology CDS 164004 164747 . - 0 ID=cds-WJG97155.1;Parent=gene-PUW34_00705;Dbxref=NCBI_GP:WJG97155.1;Name=WJG97155.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=PUW34_00705;product=cell division protein ZapD;protein_id=WJG97155.1;transl_table=11 CP118122.1 Genbank gene 164747 165367 . - . ID=gene-PUW34_00710;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=PUW34_00710 CP118122.1 Protein Homology CDS 164747 165367 . - 0 ID=cds-WJG97156.1;Parent=gene-PUW34_00710;Dbxref=NCBI_GP:WJG97156.1;Name=WJG97156.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=PUW34_00710;product=dephospho-CoA kinase;protein_id=WJG97156.1;transl_table=11 CP118122.1 Genbank gene 165593 166636 . + . ID=gene-PUW34_00715;Name=PUW34_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00715 CP118122.1 Protein Homology CDS 165593 166636 . + 0 ID=cds-WJG97157.1;Parent=gene-PUW34_00715;Dbxref=NCBI_GP:WJG97157.1;Name=WJG97157.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=PUW34_00715;product=GMP reductase;protein_id=WJG97157.1;transl_table=11 CP118122.1 Genbank gene 166667 167869 . - . ID=gene-PUW34_00720;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=PUW34_00720 CP118122.1 Protein Homology CDS 166667 167869 . - 0 ID=cds-WJG97158.1;Parent=gene-PUW34_00720;Dbxref=NCBI_GP:WJG97158.1;Name=WJG97158.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=PUW34_00720;product=protein transport protein HofC;protein_id=WJG97158.1;transl_table=11 CP118122.1 Genbank gene 167898 169244 . - . ID=gene-PUW34_00725;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=PUW34_00725 CP118122.1 Protein Homology CDS 167898 169244 . - 0 ID=cds-WJG97159.1;Parent=gene-PUW34_00725;Dbxref=NCBI_GP:WJG97159.1;Name=WJG97159.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=PUW34_00725;product=type II secretion system protein GspE;protein_id=WJG97159.1;transl_table=11 CP118122.1 Genbank gene 169254 169691 . - . ID=gene-PUW34_00730;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=PUW34_00730 CP118122.1 Protein Homology CDS 169254 169691 . - 0 ID=cds-WJG97160.1;Parent=gene-PUW34_00730;Dbxref=NCBI_GP:WJG97160.1;Name=WJG97160.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=PUW34_00730;product=prepilin peptidase-dependent pilin;protein_id=WJG97160.1;transl_table=11 CP118122.1 Genbank gene 169913 170806 . - . ID=gene-PUW34_00735;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=PUW34_00735 CP118122.1 Protein Homology CDS 169913 170806 . - 0 ID=cds-WJG97161.1;Parent=gene-PUW34_00735;Dbxref=NCBI_GP:WJG97161.1;Name=WJG97161.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=PUW34_00735;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WJG97161.1;transl_table=11 CP118122.1 Genbank gene 170894 171457 . + . ID=gene-PUW34_00740;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=PUW34_00740 CP118122.1 Protein Homology CDS 170894 171457 . + 0 ID=cds-WJG97162.1;Parent=gene-PUW34_00740;Dbxref=NCBI_GP:WJG97162.1;Name=WJG97162.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=PUW34_00740;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WJG97162.1;transl_table=11 CP118122.1 Genbank gene 171454 172308 . + . ID=gene-PUW34_00745;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=PUW34_00745 CP118122.1 Protein Homology CDS 171454 172308 . + 0 ID=cds-WJG97163.1;Parent=gene-PUW34_00745;Dbxref=NCBI_GP:WJG97163.1;Name=WJG97163.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=PUW34_00745;product=beta-lactamase regulator AmpE;protein_id=WJG97163.1;transl_table=11 CP118122.1 Genbank gene 172400 173350 . - . ID=gene-PUW34_00750;Name=PUW34_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00750 CP118122.1 Protein Homology CDS 172400 173350 . - 0 ID=cds-WJG97164.1;Parent=gene-PUW34_00750;Dbxref=NCBI_GP:WJG97164.1;Name=WJG97164.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=PUW34_00750;product=family 43 glycosylhydrolase;protein_id=WJG97164.1;transl_table=11 CP118122.1 Genbank gene 173350 174756 . - . ID=gene-PUW34_00755;Name=PUW34_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00755 CP118122.1 Protein Homology CDS 173350 174756 . - 0 ID=cds-WJG97165.1;Parent=gene-PUW34_00755;Dbxref=NCBI_GP:WJG97165.1;Name=WJG97165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=PUW34_00755;product=MFS transporter;protein_id=WJG97165.1;transl_table=11 CP118122.1 Genbank gene 174920 176293 . - . ID=gene-PUW34_00760;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=PUW34_00760 CP118122.1 Protein Homology CDS 174920 176293 . - 0 ID=cds-WJG98887.1;Parent=gene-PUW34_00760;Dbxref=NCBI_GP:WJG98887.1;Name=WJG98887.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=PUW34_00760;product=aromatic amino acid transporter AroP;protein_id=WJG98887.1;transl_table=11 CP118122.1 Genbank gene 176856 177608 . + . ID=gene-PUW34_00765;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=PUW34_00765 CP118122.1 Protein Homology CDS 176856 177608 . + 0 ID=cds-WJG97166.1;Parent=gene-PUW34_00765;Dbxref=NCBI_GP:WJG97166.1;Name=WJG97166.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331770.1;locus_tag=PUW34_00765;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WJG97166.1;transl_table=11 CP118122.1 Genbank gene 177780 180443 . + . ID=gene-PUW34_00770;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=PUW34_00770 CP118122.1 Protein Homology CDS 177780 180443 . + 0 ID=cds-WJG97167.1;Parent=gene-PUW34_00770;Dbxref=NCBI_GP:WJG97167.1;Name=WJG97167.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=PUW34_00770;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WJG97167.1;transl_table=11 CP118122.1 Genbank gene 180458 182341 . + . ID=gene-PUW34_00775;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=PUW34_00775 CP118122.1 Protein Homology CDS 180458 182341 . + 0 ID=cds-WJG97168.1;Parent=gene-PUW34_00775;Dbxref=NCBI_GP:WJG97168.1;Name=WJG97168.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=PUW34_00775;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WJG97168.1;transl_table=11 CP118122.1 Genbank gene 182543 183967 . + . ID=gene-PUW34_00780;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PUW34_00780 CP118122.1 Protein Homology CDS 182543 183967 . + 0 ID=cds-WJG98888.1;Parent=gene-PUW34_00780;Dbxref=NCBI_GP:WJG98888.1;Name=WJG98888.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=PUW34_00780;product=dihydrolipoyl dehydrogenase;protein_id=WJG98888.1;transl_table=11 CP118122.1 Genbank gene 184256 184540 . + . ID=gene-PUW34_00785;Name=PUW34_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00785 CP118122.1 Protein Homology CDS 184256 184540 . + 0 ID=cds-WJG97169.1;Parent=gene-PUW34_00785;Dbxref=NCBI_GP:WJG97169.1;Name=WJG97169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=PUW34_00785;product=hypothetical protein;protein_id=WJG97169.1;transl_table=11 CP118122.1 Genbank gene 184578 185369 . - . ID=gene-PUW34_00790;Name=PUW34_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00790 CP118122.1 Protein Homology CDS 184578 185369 . - 0 ID=cds-WJG97170.1;Parent=gene-PUW34_00790;Dbxref=NCBI_GP:WJG97170.1;Name=WJG97170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=PUW34_00790;product=DUF2950 family protein;protein_id=WJG97170.1;transl_table=11 CP118122.1 Genbank gene 185382 187004 . - . ID=gene-PUW34_00795;Name=PUW34_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00795 CP118122.1 Protein Homology CDS 185382 187004 . - 0 ID=cds-WJG97171.1;Parent=gene-PUW34_00795;Dbxref=NCBI_GP:WJG97171.1;Name=WJG97171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=PUW34_00795;product=DUF3300 domain-containing protein;protein_id=WJG97171.1;transl_table=11 CP118122.1 Genbank gene 187393 189990 . + . ID=gene-PUW34_00800;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=PUW34_00800 CP118122.1 Protein Homology CDS 187393 189990 . + 0 ID=cds-WJG97172.1;Parent=gene-PUW34_00800;Dbxref=NCBI_GP:WJG97172.1;Name=WJG97172.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=PUW34_00800;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WJG97172.1;transl_table=11 CP118122.1 Genbank gene 190030 190494 . - . ID=gene-PUW34_00805;Name=PUW34_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00805 CP118122.1 Protein Homology CDS 190030 190494 . - 0 ID=cds-WJG97173.1;Parent=gene-PUW34_00805;Dbxref=NCBI_GP:WJG97173.1;Name=WJG97173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=PUW34_00805;product=hypothetical protein;protein_id=WJG97173.1;transl_table=11 CP118122.1 Genbank gene 190911 191234 . - . ID=gene-PUW34_00810;Name=PUW34_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00810 CP118122.1 Protein Homology CDS 190911 191234 . - 0 ID=cds-WJG97174.1;Parent=gene-PUW34_00810;Dbxref=NCBI_GP:WJG97174.1;Name=WJG97174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=PUW34_00810;product=phosphotyrosine protein phosphatase;protein_id=WJG97174.1;transl_table=11 CP118122.1 Genbank gene 191505 191867 . + . ID=gene-PUW34_00815;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=PUW34_00815 CP118122.1 Protein Homology CDS 191505 191867 . + 0 ID=cds-WJG97175.1;Parent=gene-PUW34_00815;Dbxref=NCBI_GP:WJG97175.1;Name=WJG97175.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=PUW34_00815;product=protein YacL;protein_id=WJG97175.1;transl_table=11 CP118122.1 Genbank gene 192102 193055 . + . ID=gene-PUW34_00820;Name=PUW34_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00820 CP118122.1 Protein Homology CDS 192102 193055 . + 0 ID=cds-WJG97176.1;Parent=gene-PUW34_00820;Dbxref=NCBI_GP:WJG97176.1;Name=WJG97176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=PUW34_00820;product=2-keto-3-deoxygluconate permease 1;protein_id=WJG97176.1;transl_table=11 CP118122.1 Genbank gene 193052 194323 . + . ID=gene-PUW34_00825;Name=PUW34_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00825 CP118122.1 Protein Homology CDS 193052 194323 . + 0 ID=cds-WJG97177.1;Parent=gene-PUW34_00825;Dbxref=NCBI_GP:WJG97177.1;Name=WJG97177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=PUW34_00825;product=D-threonate kinase;protein_id=WJG97177.1;transl_table=11 CP118122.1 Genbank gene 194313 195296 . + . ID=gene-PUW34_00830;Name=PUW34_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00830 CP118122.1 Protein Homology CDS 194313 195296 . + 0 ID=cds-WJG97178.1;Parent=gene-PUW34_00830;Dbxref=NCBI_GP:WJG97178.1;Name=WJG97178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=PUW34_00830;product=D-threonate 4-phosphate dehydrogenase;protein_id=WJG97178.1;transl_table=11 CP118122.1 Genbank gene 195306 196073 . + . ID=gene-PUW34_00835;Name=PUW34_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00835 CP118122.1 Protein Homology CDS 195306 196073 . + 0 ID=cds-WJG97179.1;Parent=gene-PUW34_00835;Dbxref=NCBI_GP:WJG97179.1;Name=WJG97179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=PUW34_00835;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG97179.1;transl_table=11 CP118122.1 Genbank gene 196103 196897 . - . ID=gene-PUW34_00840;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=PUW34_00840 CP118122.1 Protein Homology CDS 196103 196897 . - 0 ID=cds-WJG97180.1;Parent=gene-PUW34_00840;Dbxref=NCBI_GP:WJG97180.1;Name=WJG97180.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=PUW34_00840;product=adenosylmethionine decarboxylase;protein_id=WJG97180.1;transl_table=11 CP118122.1 Genbank gene 196918 197778 . - . ID=gene-PUW34_00845;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=PUW34_00845 CP118122.1 Protein Homology CDS 196918 197778 . - 0 ID=cds-WJG97181.1;Parent=gene-PUW34_00845;Dbxref=NCBI_GP:WJG97181.1;Name=WJG97181.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=PUW34_00845;product=polyamine aminopropyltransferase;protein_id=WJG97181.1;transl_table=11 CP118122.1 Genbank pseudogene 197885 198231 . - . ID=gene-PUW34_00850;Name=PUW34_00850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00850;pseudo=true CP118122.1 Protein Homology CDS 197885 198231 . - 0 ID=cds-PUW34_00850;Parent=gene-PUW34_00850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=PUW34_00850;product=YacC family pilotin-like protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 198433 200042 . + . ID=gene-PUW34_00855;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=pseudogene;locus_tag=PUW34_00855;pseudo=true CP118122.1 Protein Homology CDS 198433 200042 . + 0 ID=cds-PUW34_00855;Parent=gene-PUW34_00855;Note=frameshifted;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=PUW34_00855;product=multicopper oxidase CueO;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 200120 202510 . - . ID=gene-PUW34_00860;Name=PUW34_00860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00860;pseudo=true CP118122.1 Protein Homology CDS 200120 202510 . - 0 ID=cds-PUW34_00860;Parent=gene-PUW34_00860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=PUW34_00860;product=pyrroloquinoline quinone-dependent dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 202716 203252 . + . ID=gene-PUW34_00865;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=PUW34_00865 CP118122.1 Protein Homology CDS 202716 203252 . + 0 ID=cds-WJG97182.1;Parent=gene-PUW34_00865;Dbxref=NCBI_GP:WJG97182.1;Name=WJG97182.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=PUW34_00865;product=hypoxanthine phosphoribosyltransferase;protein_id=WJG97182.1;transl_table=11 CP118122.1 Genbank gene 203310 203972 . - . ID=gene-PUW34_00870;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=PUW34_00870 CP118122.1 Protein Homology CDS 203310 203972 . - 0 ID=cds-WJG97183.1;Parent=gene-PUW34_00870;Dbxref=NCBI_GP:WJG97183.1;Name=WJG97183.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=PUW34_00870;product=carbonate dehydratase;protein_id=WJG97183.1;transl_table=11 CP118122.1 Genbank gene 204081 205007 . + . ID=gene-PUW34_00875;Name=PUW34_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00875 CP118122.1 Protein Homology CDS 204081 205007 . + 0 ID=cds-WJG97184.1;Parent=gene-PUW34_00875;Dbxref=NCBI_GP:WJG97184.1;Name=WJG97184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=PUW34_00875;product=ABC transporter ATP-binding protein;protein_id=WJG97184.1;transl_table=11 CP118122.1 Genbank gene 205004 205774 . + . ID=gene-PUW34_00880;Name=PUW34_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00880 CP118122.1 Protein Homology CDS 205004 205774 . + 0 ID=cds-WJG97185.1;Parent=gene-PUW34_00880;Dbxref=NCBI_GP:WJG97185.1;Name=WJG97185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=PUW34_00880;product=ABC transporter permease;protein_id=WJG97185.1;transl_table=11 CP118122.1 Genbank gene 205894 206973 . - . ID=gene-PUW34_00885;Name=PUW34_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00885 CP118122.1 Protein Homology CDS 205894 206973 . - 0 ID=cds-WJG97186.1;Parent=gene-PUW34_00885;Dbxref=NCBI_GP:WJG97186.1;Name=WJG97186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=PUW34_00885;product=fimbrial protein;protein_id=WJG97186.1;transl_table=11 CP118122.1 Genbank pseudogene 206982 209528 . - . ID=gene-PUW34_00890;Name=PUW34_00890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00890;pseudo=true CP118122.1 Protein Homology CDS 206982 209528 . - 0 ID=cds-PUW34_00890;Parent=gene-PUW34_00890;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=PUW34_00890;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 209555 210238 . - . ID=gene-PUW34_00895;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=PUW34_00895 CP118122.1 Protein Homology CDS 209555 210238 . - 0 ID=cds-WJG97187.1;Parent=gene-PUW34_00895;Dbxref=NCBI_GP:WJG97187.1;Name=WJG97187.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=PUW34_00895;product=fimbrial biogenesis chaperone StiB;protein_id=WJG97187.1;transl_table=11 CP118122.1 Genbank gene 210286 210825 . - . ID=gene-PUW34_00900;Name=PUW34_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00900 CP118122.1 Protein Homology CDS 210286 210825 . - 0 ID=cds-WJG97188.1;Parent=gene-PUW34_00900;Dbxref=NCBI_GP:WJG97188.1;Name=WJG97188.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=PUW34_00900;product=fimbrial protein;protein_id=WJG97188.1;transl_table=11 CP118122.1 Genbank pseudogene 211194 211623 . + . ID=gene-PUW34_00905;Name=PUW34_00905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_00905;pseudo=true CP118122.1 Protein Homology CDS 211194 211623 . + 0 ID=cds-PUW34_00905;Parent=gene-PUW34_00905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=PUW34_00905;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 211685 212914 . + . ID=gene-PUW34_00910;Name=PUW34_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00910 CP118122.1 Protein Homology CDS 211685 212914 . + 0 ID=cds-WJG97189.1;Parent=gene-PUW34_00910;Dbxref=NCBI_GP:WJG97189.1;Name=WJG97189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=PUW34_00910;product=polysaccharide deacetylase family protein;protein_id=WJG97189.1;transl_table=11 CP118122.1 Genbank gene 212921 213301 . - . ID=gene-PUW34_00915;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=PUW34_00915 CP118122.1 Protein Homology CDS 212921 213301 . - 0 ID=cds-WJG97190.1;Parent=gene-PUW34_00915;Dbxref=NCBI_GP:WJG97190.1;Name=WJG97190.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=PUW34_00915;product=aspartate 1-decarboxylase;protein_id=WJG97190.1;transl_table=11 CP118122.1 Genbank pseudogene 213396 214249 . - . ID=gene-PUW34_00920;Name=panC;gbkey=Gene;gene=panC;gene_biotype=pseudogene;locus_tag=PUW34_00920;pseudo=true CP118122.1 Protein Homology CDS 213396 214249 . - 0 ID=cds-PUW34_00920;Parent=gene-PUW34_00920;Note=frameshifted;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=PUW34_00920;product=pantoate--beta-alanine ligase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 214375 215166 . - . ID=gene-PUW34_00925;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=PUW34_00925 CP118122.1 Protein Homology CDS 214375 215166 . - 0 ID=cds-WJG97191.1;Parent=gene-PUW34_00925;Dbxref=NCBI_GP:WJG97191.1;Name=WJG97191.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=PUW34_00925;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WJG97191.1;transl_table=11 CP118122.1 Genbank gene 215287 215766 . - . ID=gene-PUW34_00930;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=PUW34_00930 CP118122.1 Protein Homology CDS 215287 215766 . - 0 ID=cds-WJG97192.1;Parent=gene-PUW34_00930;Dbxref=NCBI_GP:WJG97192.1;Name=WJG97192.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=PUW34_00930;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WJG97192.1;transl_table=11 CP118122.1 Genbank gene 215763 217160 . - . ID=gene-PUW34_00935;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=PUW34_00935 CP118122.1 Protein Homology CDS 215763 217160 . - 0 ID=cds-WJG98889.1;Parent=gene-PUW34_00935;Dbxref=NCBI_GP:WJG98889.1;Name=WJG98889.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=PUW34_00935;product=polynucleotide adenylyltransferase PcnB;protein_id=WJG98889.1;transl_table=11 CP118122.1 Genbank gene 217322 218218 . - . ID=gene-PUW34_00940;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=PUW34_00940 CP118122.1 Protein Homology CDS 217322 218218 . - 0 ID=cds-WJG97193.1;Parent=gene-PUW34_00940;Dbxref=NCBI_GP:WJG97193.1;Name=WJG97193.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=PUW34_00940;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WJG97193.1;transl_table=11 CP118122.1 Genbank gene 218287 218742 . - . ID=gene-PUW34_00945;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=PUW34_00945 CP118122.1 Protein Homology CDS 218287 218742 . - 0 ID=cds-WJG97194.1;Parent=gene-PUW34_00945;Dbxref=NCBI_GP:WJG97194.1;Name=WJG97194.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=PUW34_00945;product=RNA polymerase-binding protein DksA;protein_id=WJG97194.1;transl_table=11 CP118122.1 Genbank gene 218919 219623 . - . ID=gene-PUW34_00950;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=PUW34_00950 CP118122.1 Protein Homology CDS 218919 219623 . - 0 ID=cds-WJG97195.1;Parent=gene-PUW34_00950;Dbxref=NCBI_GP:WJG97195.1;Name=WJG97195.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=PUW34_00950;product=DNA/RNA nuclease SfsA;protein_id=WJG97195.1;transl_table=11 CP118122.1 Genbank gene 219640 220170 . - . ID=gene-PUW34_00955;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=PUW34_00955 CP118122.1 Protein Homology CDS 219640 220170 . - 0 ID=cds-WJG97196.1;Parent=gene-PUW34_00955;Dbxref=NCBI_GP:WJG97196.1;Name=WJG97196.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=PUW34_00955;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WJG97196.1;transl_table=11 CP118122.1 Genbank gene 220243 222672 . + . ID=gene-PUW34_00960;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=PUW34_00960 CP118122.1 Protein Homology CDS 220243 222672 . + 0 ID=cds-WJG98890.1;Parent=gene-PUW34_00960;Dbxref=NCBI_GP:WJG98890.1;Name=WJG98890.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=PUW34_00960;product=ATP-dependent helicase HrpB;protein_id=WJG98890.1;transl_table=11 CP118122.1 Genbank gene 222813 225335 . + . ID=gene-PUW34_00965;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=PUW34_00965 CP118122.1 Protein Homology CDS 222813 225335 . + 0 ID=cds-WJG97197.1;Parent=gene-PUW34_00965;Dbxref=NCBI_GP:WJG97197.1;Name=WJG97197.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=PUW34_00965;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WJG97197.1;transl_table=11 CP118122.1 Genbank gene 225628 227817 . + . ID=gene-PUW34_00970;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=PUW34_00970 CP118122.1 Protein Homology CDS 225628 227817 . + 0 ID=cds-WJG97198.1;Parent=gene-PUW34_00970;Dbxref=NCBI_GP:WJG97198.1;Name=WJG97198.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=PUW34_00970;product=ferrichrome porin FhuA;protein_id=WJG97198.1;transl_table=11 CP118122.1 Genbank gene 227866 228663 . + . ID=gene-PUW34_00975;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=PUW34_00975 CP118122.1 Protein Homology CDS 227866 228663 . + 0 ID=cds-WJG97199.1;Parent=gene-PUW34_00975;Dbxref=NCBI_GP:WJG97199.1;Name=WJG97199.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=PUW34_00975;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WJG97199.1;transl_table=11 CP118122.1 Genbank gene 228663 229553 . + . ID=gene-PUW34_00980;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=PUW34_00980 CP118122.1 Protein Homology CDS 228663 229553 . + 0 ID=cds-WJG97200.1;Parent=gene-PUW34_00980;Dbxref=NCBI_GP:WJG97200.1;Name=WJG97200.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=PUW34_00980;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WJG97200.1;transl_table=11 CP118122.1 Genbank pseudogene 229568 231606 . + . ID=gene-PUW34_00985;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=pseudogene;locus_tag=PUW34_00985;pseudo=true CP118122.1 Protein Homology CDS 229568 231606 . + 0 ID=cds-PUW34_00985;Parent=gene-PUW34_00985;Note=frameshifted;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=PUW34_00985;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 232546 233106 . + . ID=gene-PUW34_00990;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=PUW34_00990 CP118122.1 Protein Homology CDS 232546 233106 . + 0 ID=cds-WJG97201.1;Parent=gene-PUW34_00990;Dbxref=NCBI_GP:WJG97201.1;Name=WJG97201.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=PUW34_00990;product=fimbrial major subunit StfA;protein_id=WJG97201.1;transl_table=11 CP118122.1 Genbank gene 233192 235849 . + . ID=gene-PUW34_00995;Name=PUW34_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_00995 CP118122.1 Protein Homology CDS 233192 235849 . + 0 ID=cds-WJG97202.1;Parent=gene-PUW34_00995;Dbxref=NCBI_GP:WJG97202.1;Name=WJG97202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=PUW34_00995;product=fimbrial biogenesis outer membrane usher protein;protein_id=WJG97202.1;transl_table=11 CP118122.1 Genbank gene 235867 236619 . + . ID=gene-PUW34_01000;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=PUW34_01000 CP118122.1 Protein Homology CDS 235867 236619 . + 0 ID=cds-WJG97203.1;Parent=gene-PUW34_01000;Dbxref=NCBI_GP:WJG97203.1;Name=WJG97203.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=PUW34_01000;product=fimbrial chaperone StfD;protein_id=WJG97203.1;transl_table=11 CP118122.1 Genbank gene 236638 237150 . + . ID=gene-PUW34_01005;Name=PUW34_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01005 CP118122.1 Protein Homology CDS 236638 237150 . + 0 ID=cds-WJG97204.1;Parent=gene-PUW34_01005;Dbxref=NCBI_GP:WJG97204.1;Name=WJG97204.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=PUW34_01005;product=fimbrial protein;protein_id=WJG97204.1;transl_table=11 CP118122.1 Genbank pseudogene 237147 237623 . + . ID=gene-PUW34_01010;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=pseudogene;locus_tag=PUW34_01010;pseudo=true CP118122.1 Protein Homology CDS 237147 237623 . + 0 ID=cds-PUW34_01010;Parent=gene-PUW34_01010;Note=internal stop;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=PUW34_01010;product=fimbrial minor subunit StfF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 237623 238153 . + . ID=gene-PUW34_01015;Name=PUW34_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01015 CP118122.1 Protein Homology CDS 237623 238153 . + 0 ID=cds-WJG97205.1;Parent=gene-PUW34_01015;Dbxref=NCBI_GP:WJG97205.1;Name=WJG97205.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=PUW34_01015;product=fimbrial protein;protein_id=WJG97205.1;transl_table=11 CP118122.1 Genbank pseudogene 238153 238994 . + . ID=gene-PUW34_01020;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=pseudogene;locus_tag=PUW34_01020;pseudo=true CP118122.1 Protein Homology CDS 238153 238994 . + 0 ID=cds-PUW34_01020;Parent=gene-PUW34_01020;Note=frameshifted%3B internal stop;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=PUW34_01020;product=fimbrial adhesin StfH;pseudo=true;transl_table=11 CP118122.1 Genbank gene 239101 240381 . - . ID=gene-PUW34_01025;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=PUW34_01025 CP118122.1 Protein Homology CDS 239101 240381 . - 0 ID=cds-WJG97206.1;Parent=gene-PUW34_01025;Dbxref=NCBI_GP:WJG97206.1;Name=WJG97206.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=PUW34_01025;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WJG97206.1;transl_table=11 CP118122.1 Genbank gene 240551 241972 . + . ID=gene-PUW34_01030;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=PUW34_01030 CP118122.1 Protein Homology CDS 240551 241972 . + 0 ID=cds-WJG97207.1;Parent=gene-PUW34_01030;Dbxref=NCBI_GP:WJG97207.1;Name=WJG97207.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=PUW34_01030;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WJG97207.1;transl_table=11 CP118122.1 Genbank gene 242054 242398 . + . ID=gene-PUW34_01035;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=PUW34_01035 CP118122.1 Protein Homology CDS 242054 242398 . + 0 ID=cds-WJG97208.1;Parent=gene-PUW34_01035;Dbxref=NCBI_GP:WJG97208.1;Name=WJG97208.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=PUW34_01035;product=iron-sulfur cluster insertion protein ErpA;protein_id=WJG97208.1;transl_table=11 CP118122.1 Genbank gene 242499 243122 . - . ID=gene-PUW34_01040;Name=PUW34_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01040 CP118122.1 Protein Homology CDS 242499 243122 . - 0 ID=cds-WJG97209.1;Parent=gene-PUW34_01040;Dbxref=NCBI_GP:WJG97209.1;Name=WJG97209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=PUW34_01040;product=TRIC cation channel family protein;protein_id=WJG97209.1;transl_table=11 CP118122.1 Genbank gene 243159 243959 . - . ID=gene-PUW34_01045;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=PUW34_01045 CP118122.1 Protein Homology CDS 243159 243959 . - 0 ID=cds-WJG97210.1;Parent=gene-PUW34_01045;Dbxref=NCBI_GP:WJG97210.1;Name=WJG97210.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=PUW34_01045;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WJG97210.1;transl_table=11 CP118122.1 Genbank gene 243952 244650 . - . ID=gene-PUW34_01050;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=PUW34_01050 CP118122.1 Protein Homology CDS 243952 244650 . - 0 ID=cds-WJG97211.1;Parent=gene-PUW34_01050;Dbxref=NCBI_GP:WJG97211.1;Name=WJG97211.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=PUW34_01050;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WJG97211.1;transl_table=11 CP118122.1 Genbank gene 244735 246252 . + . ID=gene-PUW34_01055;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=PUW34_01055 CP118122.1 Protein Homology CDS 244735 246252 . + 0 ID=cds-WJG97212.1;Parent=gene-PUW34_01055;Dbxref=NCBI_GP:WJG97212.1;Name=WJG97212.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=PUW34_01055;product=dGTPase;protein_id=WJG97212.1;transl_table=11 CP118122.1 Genbank gene 246382 247809 . + . ID=gene-PUW34_01060;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=PUW34_01060 CP118122.1 Protein Homology CDS 246382 247809 . + 0 ID=cds-WJG97213.1;Parent=gene-PUW34_01060;Dbxref=NCBI_GP:WJG97213.1;Name=WJG97213.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=PUW34_01060;product=serine endoprotease DegP;protein_id=WJG97213.1;transl_table=11 CP118122.1 Genbank gene 247962 249119 . + . ID=gene-PUW34_01065;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=PUW34_01065 CP118122.1 Protein Homology CDS 247962 249119 . + 0 ID=cds-WJG97214.1;Parent=gene-PUW34_01065;Dbxref=NCBI_GP:WJG97214.1;Name=WJG97214.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=PUW34_01065;product=DNA-binding transcriptional regulator CdaR;protein_id=WJG97214.1;transl_table=11 CP118122.1 Genbank gene 249208 249594 . - . ID=gene-PUW34_01070;Name=PUW34_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01070 CP118122.1 Protein Homology CDS 249208 249594 . - 0 ID=cds-WJG97215.1;Parent=gene-PUW34_01070;Dbxref=NCBI_GP:WJG97215.1;Name=WJG97215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=PUW34_01070;product=DUF3461 family protein;protein_id=WJG97215.1;transl_table=11 CP118122.1 Genbank gene 249841 251142 . + . ID=gene-PUW34_01075;Name=PUW34_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01075 CP118122.1 Protein Homology CDS 249841 251142 . + 0 ID=cds-WJG97216.1;Parent=gene-PUW34_01075;Dbxref=NCBI_GP:WJG97216.1;Name=WJG97216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=PUW34_01075;product=MFS transporter;protein_id=WJG97216.1;transl_table=11 CP118122.1 Genbank gene 251179 252003 . - . ID=gene-PUW34_01080;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=PUW34_01080 CP118122.1 Protein Homology CDS 251179 252003 . - 0 ID=cds-WJG97217.1;Parent=gene-PUW34_01080;Dbxref=NCBI_GP:WJG97217.1;Name=WJG97217.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=PUW34_01080;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WJG97217.1;transl_table=11 CP118122.1 Genbank gene 252033 254705 . - . ID=gene-PUW34_01085;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=PUW34_01085 CP118122.1 Protein Homology CDS 252033 254705 . - 0 ID=cds-WJG97218.1;Parent=gene-PUW34_01085;Dbxref=NCBI_GP:WJG97218.1;Name=WJG97218.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=PUW34_01085;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WJG97218.1;transl_table=11 CP118122.1 Genbank gene 254943 255737 . - . ID=gene-PUW34_01090;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=PUW34_01090 CP118122.1 Protein Homology CDS 254943 255737 . - 0 ID=cds-WJG97219.1;Parent=gene-PUW34_01090;Dbxref=NCBI_GP:WJG97219.1;Name=WJG97219.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=PUW34_01090;product=type I methionyl aminopeptidase;protein_id=WJG97219.1;transl_table=11 CP118122.1 Genbank gene 256188 256913 . + . ID=gene-PUW34_01095;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=PUW34_01095 CP118122.1 Protein Homology CDS 256188 256913 . + 0 ID=cds-WJG97220.1;Parent=gene-PUW34_01095;Dbxref=NCBI_GP:WJG97220.1;Name=WJG97220.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=PUW34_01095;product=30S ribosomal protein S2;protein_id=WJG97220.1;transl_table=11 CP118122.1 Genbank gene 257171 258022 . + . ID=gene-PUW34_01100;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=PUW34_01100 CP118122.1 Protein Homology CDS 257171 258022 . + 0 ID=cds-WJG97221.1;Parent=gene-PUW34_01100;Dbxref=NCBI_GP:WJG97221.1;Name=WJG97221.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=PUW34_01100;product=translation elongation factor Ts;protein_id=WJG97221.1;transl_table=11 CP118122.1 Genbank gene 258167 258892 . + . ID=gene-PUW34_01105;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=PUW34_01105 CP118122.1 Protein Homology CDS 258167 258892 . + 0 ID=cds-WJG97222.1;Parent=gene-PUW34_01105;Dbxref=NCBI_GP:WJG97222.1;Name=WJG97222.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=PUW34_01105;product=UMP kinase;protein_id=WJG97222.1;transl_table=11 CP118122.1 Genbank gene 259039 259596 . + . ID=gene-PUW34_01110;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=PUW34_01110 CP118122.1 Protein Homology CDS 259039 259596 . + 0 ID=cds-WJG97223.1;Parent=gene-PUW34_01110;Dbxref=NCBI_GP:WJG97223.1;Name=WJG97223.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=PUW34_01110;product=ribosome recycling factor;protein_id=WJG97223.1;transl_table=11 CP118122.1 Genbank gene 259738 260934 . + . ID=gene-PUW34_01115;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=PUW34_01115 CP118122.1 Protein Homology CDS 259738 260934 . + 0 ID=cds-WJG97224.1;Parent=gene-PUW34_01115;Dbxref=NCBI_GP:WJG97224.1;Name=WJG97224.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=PUW34_01115;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WJG97224.1;transl_table=11 CP118122.1 Genbank gene 261247 262005 . + . ID=gene-PUW34_01120;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=PUW34_01120 CP118122.1 Protein Homology CDS 261247 262005 . + 0 ID=cds-WJG97225.1;Parent=gene-PUW34_01120;Dbxref=NCBI_GP:WJG97225.1;Name=WJG97225.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=PUW34_01120;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WJG97225.1;transl_table=11 CP118122.1 Genbank gene 262018 262875 . + . ID=gene-PUW34_01125;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=PUW34_01125 CP118122.1 Protein Homology CDS 262018 262875 . + 0 ID=cds-WJG97226.1;Parent=gene-PUW34_01125;Dbxref=NCBI_GP:WJG97226.1;Name=WJG97226.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=PUW34_01125;product=phosphatidate cytidylyltransferase;protein_id=WJG97226.1;transl_table=11 CP118122.1 Genbank gene 262887 264239 . + . ID=gene-PUW34_01130;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=PUW34_01130 CP118122.1 Protein Homology CDS 262887 264239 . + 0 ID=cds-WJG97227.1;Parent=gene-PUW34_01130;Dbxref=NCBI_GP:WJG97227.1;Name=WJG97227.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=PUW34_01130;product=sigma E protease regulator RseP;protein_id=WJG97227.1;transl_table=11 CP118122.1 Genbank gene 264271 266703 . + . ID=gene-PUW34_01135;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=PUW34_01135 CP118122.1 Protein Homology CDS 264271 266703 . + 0 ID=cds-WJG97228.1;Parent=gene-PUW34_01135;Dbxref=NCBI_GP:WJG97228.1;Name=WJG97228.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=PUW34_01135;product=outer membrane protein assembly factor BamA;protein_id=WJG97228.1;transl_table=11 CP118122.1 Genbank gene 266826 267311 . + . ID=gene-PUW34_01140;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=PUW34_01140 CP118122.1 Protein Homology CDS 266826 267311 . + 0 ID=cds-WJG97229.1;Parent=gene-PUW34_01140;Dbxref=NCBI_GP:WJG97229.1;Name=WJG97229.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=PUW34_01140;product=molecular chaperone Skp;protein_id=WJG97229.1;transl_table=11 CP118122.1 Genbank gene 267315 268340 . + . ID=gene-PUW34_01145;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=PUW34_01145 CP118122.1 Protein Homology CDS 267315 268340 . + 0 ID=cds-WJG97230.1;Parent=gene-PUW34_01145;Dbxref=NCBI_GP:WJG97230.1;Name=WJG97230.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=PUW34_01145;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WJG97230.1;transl_table=11 CP118122.1 Genbank gene 268446 268901 . + . ID=gene-PUW34_01150;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=PUW34_01150 CP118122.1 Protein Homology CDS 268446 268901 . + 0 ID=cds-WJG97231.1;Parent=gene-PUW34_01150;Dbxref=NCBI_GP:WJG97231.1;Name=WJG97231.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=PUW34_01150;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WJG97231.1;transl_table=11 CP118122.1 Genbank gene 268905 269693 . + . ID=gene-PUW34_01155;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=PUW34_01155 CP118122.1 Protein Homology CDS 268905 269693 . + 0 ID=cds-WJG97232.1;Parent=gene-PUW34_01155;Dbxref=NCBI_GP:WJG97232.1;Name=WJG97232.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=PUW34_01155;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WJG97232.1;transl_table=11 CP118122.1 Genbank gene 269693 270841 . + . ID=gene-PUW34_01160;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=PUW34_01160 CP118122.1 Protein Homology CDS 269693 270841 . + 0 ID=cds-WJG97233.1;Parent=gene-PUW34_01160;Dbxref=NCBI_GP:WJG97233.1;Name=WJG97233.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=PUW34_01160;product=lipid-A-disaccharide synthase;protein_id=WJG97233.1;transl_table=11 CP118122.1 Genbank gene 270838 271434 . + . ID=gene-PUW34_01165;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=PUW34_01165 CP118122.1 Protein Homology CDS 270838 271434 . + 0 ID=cds-WJG97234.1;Parent=gene-PUW34_01165;Dbxref=NCBI_GP:WJG97234.1;Name=WJG97234.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=PUW34_01165;product=ribonuclease HII;protein_id=WJG97234.1;transl_table=11 CP118122.1 Genbank gene 271458 274940 . + . ID=gene-PUW34_01170;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=PUW34_01170 CP118122.1 Protein Homology CDS 271458 274940 . + 0 ID=cds-WJG97235.1;Parent=gene-PUW34_01170;Dbxref=NCBI_GP:WJG97235.1;Name=WJG97235.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=PUW34_01170;product=DNA polymerase III subunit alpha;protein_id=WJG97235.1;transl_table=11 CP118122.1 Genbank gene 274953 275912 . + . ID=gene-PUW34_01175;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=PUW34_01175 CP118122.1 Protein Homology CDS 274953 275912 . + 0 ID=cds-WJG97236.1;Parent=gene-PUW34_01175;Dbxref=NCBI_GP:WJG97236.1;Name=WJG97236.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=PUW34_01175;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WJG97236.1;transl_table=11 CP118122.1 Genbank gene 276141 277856 . + . ID=gene-PUW34_01180;Name=PUW34_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01180 CP118122.1 Protein Homology CDS 276141 277856 . + 0 ID=cds-WJG97237.1;Parent=gene-PUW34_01180;Dbxref=NCBI_GP:WJG97237.1;Name=WJG97237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007718136.1;locus_tag=PUW34_01180;product=PKD domain-containing protein;protein_id=WJG97237.1;transl_table=11 CP118122.1 Genbank gene 277932 280073 . + . ID=gene-PUW34_01185;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=PUW34_01185 CP118122.1 Protein Homology CDS 277932 280073 . + 0 ID=cds-WJG97238.1;Parent=gene-PUW34_01185;Dbxref=NCBI_GP:WJG97238.1;Name=WJG97238.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=PUW34_01185;product=lysine decarboxylase LdcC;protein_id=WJG97238.1;transl_table=11 CP118122.1 Genbank gene 280129 280518 . + . ID=gene-PUW34_01190;Name=PUW34_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01190 CP118122.1 Protein Homology CDS 280129 280518 . + 0 ID=cds-WJG97239.1;Parent=gene-PUW34_01190;Dbxref=NCBI_GP:WJG97239.1;Name=WJG97239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=PUW34_01190;product=VOC family protein;protein_id=WJG97239.1;transl_table=11 CP118122.1 Genbank gene 280581 281873 . + . ID=gene-PUW34_01195;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=PUW34_01195 CP118122.1 Protein Homology CDS 280581 281873 . + 0 ID=cds-WJG97240.1;Parent=gene-PUW34_01195;Dbxref=NCBI_GP:WJG97240.1;Name=WJG97240.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=PUW34_01195;product=tRNA lysidine(34) synthetase TilS;protein_id=WJG97240.1;transl_table=11 CP118122.1 Genbank gene 281957 282217 . - . ID=gene-PUW34_01200;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=PUW34_01200 CP118122.1 Protein Homology CDS 281957 282217 . - 0 ID=cds-WJG97241.1;Parent=gene-PUW34_01200;Dbxref=NCBI_GP:WJG97241.1;Name=WJG97241.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=PUW34_01200;product=Rho-binding antiterminator;protein_id=WJG97241.1;transl_table=11 CP118122.1 Genbank gene 282204 282404 . - . ID=gene-PUW34_01205;Name=PUW34_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01205 CP118122.1 Protein Homology CDS 282204 282404 . - 0 ID=cds-WJG97242.1;Parent=gene-PUW34_01205;Dbxref=NCBI_GP:WJG97242.1;Name=WJG97242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=PUW34_01205;product=YaeP family protein;protein_id=WJG97242.1;transl_table=11 CP118122.1 Genbank gene 282602 283147 . + . ID=gene-PUW34_01210;Name=PUW34_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01210 CP118122.1 Protein Homology CDS 282602 283147 . + 0 ID=cds-WJG97243.1;Parent=gene-PUW34_01210;Dbxref=NCBI_GP:WJG97243.1;Name=WJG97243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=PUW34_01210;product=YaeQ family protein;protein_id=WJG97243.1;transl_table=11 CP118122.1 Genbank gene 283144 283566 . + . ID=gene-PUW34_01215;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=PUW34_01215 CP118122.1 Protein Homology CDS 283144 283566 . + 0 ID=cds-WJG97244.1;Parent=gene-PUW34_01215;Dbxref=NCBI_GP:WJG97244.1;Name=WJG97244.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=PUW34_01215;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WJG97244.1;transl_table=11 CP118122.1 Genbank gene 283598 284299 . + . ID=gene-PUW34_01220;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=PUW34_01220 CP118122.1 Protein Homology CDS 283598 284299 . + 0 ID=cds-WJG97245.1;Parent=gene-PUW34_01220;Dbxref=NCBI_GP:WJG97245.1;Name=WJG97245.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=PUW34_01220;product=envelope stress response activation lipoprotein NlpE;protein_id=WJG97245.1;transl_table=11 CP118122.1 Genbank gene 284373 286091 . - . ID=gene-PUW34_01225;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=PUW34_01225 CP118122.1 Protein Homology CDS 284373 286091 . - 0 ID=cds-WJG97246.1;Parent=gene-PUW34_01225;Dbxref=NCBI_GP:WJG97246.1;Name=WJG97246.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=PUW34_01225;product=proline--tRNA ligase;protein_id=WJG97246.1;transl_table=11 CP118122.1 Genbank gene 286202 286909 . - . ID=gene-PUW34_01230;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=PUW34_01230 CP118122.1 Protein Homology CDS 286202 286909 . - 0 ID=cds-WJG97247.1;Parent=gene-PUW34_01230;Dbxref=NCBI_GP:WJG97247.1;Name=WJG97247.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=PUW34_01230;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WJG97247.1;transl_table=11 CP118122.1 Genbank gene 286906 287310 . - . ID=gene-PUW34_01235;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=PUW34_01235 CP118122.1 Protein Homology CDS 286906 287310 . - 0 ID=cds-WJG97248.1;Parent=gene-PUW34_01235;Dbxref=NCBI_GP:WJG97248.1;Name=WJG97248.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=PUW34_01235;product=Rcs stress response system protein RcsF;protein_id=WJG97248.1;transl_table=11 CP118122.1 Genbank gene 287429 288244 . - . ID=gene-PUW34_01240;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=PUW34_01240 CP118122.1 Protein Homology CDS 287429 288244 . - 0 ID=cds-WJG97249.1;Parent=gene-PUW34_01240;Dbxref=NCBI_GP:WJG97249.1;Name=WJG97249.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=PUW34_01240;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WJG97249.1;transl_table=11 CP118122.1 Genbank gene 288283 288936 . - . ID=gene-PUW34_01245;Name=PUW34_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01245 CP118122.1 Protein Homology CDS 288283 288936 . - 0 ID=cds-WJG97250.1;Parent=gene-PUW34_01245;Dbxref=NCBI_GP:WJG97250.1;Name=WJG97250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=PUW34_01245;product=methionine ABC transporter permease MetI;protein_id=WJG97250.1;transl_table=11 CP118122.1 Genbank gene 288929 289960 . - . ID=gene-PUW34_01250;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=PUW34_01250 CP118122.1 Protein Homology CDS 288929 289960 . - 0 ID=cds-WJG97251.1;Parent=gene-PUW34_01250;Dbxref=NCBI_GP:WJG97251.1;Name=WJG97251.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=PUW34_01250;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WJG97251.1;transl_table=11 CP118122.1 Genbank gene 290150 290716 . + . ID=gene-PUW34_01255;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=PUW34_01255 CP118122.1 Protein Homology CDS 290150 290716 . + 0 ID=cds-WJG97252.1;Parent=gene-PUW34_01255;Dbxref=NCBI_GP:WJG97252.1;Name=WJG97252.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=PUW34_01255;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WJG97252.1;transl_table=11 CP118122.1 Genbank gene 291084 292625 . + . ID=gene-PUW34_01260;Name=PUW34_01260;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_01260 CP118122.1 cmsearch rRNA 291084 292625 . + . ID=rna-PUW34_01260;Parent=gene-PUW34_01260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_01260;product=16S ribosomal RNA CP118122.1 cmsearch exon 291084 292625 . + . ID=exon-PUW34_01260-1;Parent=rna-PUW34_01260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_01260;product=16S ribosomal RNA CP118122.1 Genbank gene 292695 292771 . + . ID=gene-PUW34_01265;Name=PUW34_01265;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_01265 CP118122.1 tRNAscan-SE tRNA 292695 292771 . + . ID=rna-PUW34_01265;Parent=gene-PUW34_01265;anticodon=(pos:292729..292731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01265;product=tRNA-Ile CP118122.1 tRNAscan-SE exon 292695 292771 . + . ID=exon-PUW34_01265-1;Parent=rna-PUW34_01265;anticodon=(pos:292729..292731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01265;product=tRNA-Ile CP118122.1 Genbank gene 292883 292958 . + . ID=gene-PUW34_01270;Name=PUW34_01270;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_01270 CP118122.1 tRNAscan-SE tRNA 292883 292958 . + . ID=rna-PUW34_01270;Parent=gene-PUW34_01270;anticodon=(pos:292916..292918);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01270;product=tRNA-Ala CP118122.1 tRNAscan-SE exon 292883 292958 . + . ID=exon-PUW34_01270-1;Parent=rna-PUW34_01270;anticodon=(pos:292916..292918);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01270;product=tRNA-Ala CP118122.1 Genbank gene 293141 296129 . + . ID=gene-PUW34_01275;Name=PUW34_01275;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_01275 CP118122.1 cmsearch rRNA 293141 296129 . + . ID=rna-PUW34_01275;Parent=gene-PUW34_01275;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_01275;product=23S ribosomal RNA CP118122.1 cmsearch exon 293141 296129 . + . ID=exon-PUW34_01275-1;Parent=rna-PUW34_01275;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_01275;product=23S ribosomal RNA CP118122.1 Genbank gene 296326 296441 . + . ID=gene-PUW34_01280;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW34_01280 CP118122.1 cmsearch rRNA 296326 296441 . + . ID=rna-PUW34_01280;Parent=gene-PUW34_01280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_01280;product=5S ribosomal RNA CP118122.1 cmsearch exon 296326 296441 . + . ID=exon-PUW34_01280-1;Parent=rna-PUW34_01280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_01280;product=5S ribosomal RNA CP118122.1 Genbank gene 296633 296709 . + . ID=gene-PUW34_01285;Name=PUW34_01285;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_01285 CP118122.1 tRNAscan-SE tRNA 296633 296709 . + . ID=rna-PUW34_01285;Parent=gene-PUW34_01285;anticodon=(pos:296667..296669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01285;product=tRNA-Asp CP118122.1 tRNAscan-SE exon 296633 296709 . + . ID=exon-PUW34_01285-1;Parent=rna-PUW34_01285;anticodon=(pos:296667..296669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01285;product=tRNA-Asp CP118122.1 Genbank gene 296874 297677 . + . ID=gene-PUW34_01290;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=PUW34_01290 CP118122.1 Protein Homology CDS 296874 297677 . + 0 ID=cds-WJG97253.1;Parent=gene-PUW34_01290;Dbxref=NCBI_GP:WJG97253.1;Name=WJG97253.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=PUW34_01290;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WJG97253.1;transl_table=11 CP118122.1 Genbank gene 297698 298612 . - . ID=gene-PUW34_01295;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=PUW34_01295 CP118122.1 Protein Homology CDS 297698 298612 . - 0 ID=cds-WJG97254.1;Parent=gene-PUW34_01295;Dbxref=NCBI_GP:WJG97254.1;Name=WJG97254.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=PUW34_01295;product=DNA-binding transcriptional regulator YafC;protein_id=WJG97254.1;transl_table=11 CP118122.1 Genbank pseudogene 298717 299891 . + . ID=gene-PUW34_01300;Name=PUW34_01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01300;pseudo=true CP118122.1 Protein Homology CDS 298717 299891 . + 0 ID=cds-PUW34_01300;Parent=gene-PUW34_01300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=PUW34_01300;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 300022 300822 . + . ID=gene-PUW34_01305;Name=PUW34_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01305 CP118122.1 Protein Homology CDS 300022 300822 . + 0 ID=cds-WJG97255.1;Parent=gene-PUW34_01305;Dbxref=NCBI_GP:WJG97255.1;Name=WJG97255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=PUW34_01305;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WJG97255.1;transl_table=11 CP118122.1 Genbank gene 300900 301670 . + . ID=gene-PUW34_01310;Name=PUW34_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01310 CP118122.1 Protein Homology CDS 300900 301670 . + 0 ID=cds-WJG97256.1;Parent=gene-PUW34_01310;Dbxref=NCBI_GP:WJG97256.1;Name=WJG97256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=PUW34_01310;product=class I SAM-dependent methyltransferase;protein_id=WJG97256.1;transl_table=11 CP118122.1 Genbank gene 301726 303093 . - . ID=gene-PUW34_01315;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=PUW34_01315 CP118122.1 Protein Homology CDS 301726 303093 . - 0 ID=cds-WJG97257.1;Parent=gene-PUW34_01315;Dbxref=NCBI_GP:WJG97257.1;Name=WJG97257.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=PUW34_01315;product=murein transglycosylase D;protein_id=WJG97257.1;transl_table=11 CP118122.1 Genbank gene 303165 303920 . - . ID=gene-PUW34_01320;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=PUW34_01320 CP118122.1 Protein Homology CDS 303165 303920 . - 0 ID=cds-WJG97258.1;Parent=gene-PUW34_01320;Dbxref=NCBI_GP:WJG97258.1;Name=WJG97258.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=PUW34_01320;product=hydroxyacylglutathione hydrolase;protein_id=WJG97258.1;transl_table=11 CP118122.1 Genbank gene 303955 304677 . + . ID=gene-PUW34_01325;Name=PUW34_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01325 CP118122.1 Protein Homology CDS 303955 304677 . + 0 ID=cds-WJG97259.1;Parent=gene-PUW34_01325;Dbxref=NCBI_GP:WJG97259.1;Name=WJG97259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=PUW34_01325;product=class I SAM-dependent methyltransferase;protein_id=WJG97259.1;transl_table=11 CP118122.1 Genbank gene 304674 305141 . - . ID=gene-PUW34_01330;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=PUW34_01330 CP118122.1 Protein Homology CDS 304674 305141 . - 0 ID=cds-WJG97260.1;Parent=gene-PUW34_01330;Dbxref=NCBI_GP:WJG97260.1;Name=WJG97260.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=PUW34_01330;product=ribonuclease HI;protein_id=WJG97260.1;transl_table=11 CP118122.1 Genbank gene 305205 305936 . + . ID=gene-PUW34_01335;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=PUW34_01335 CP118122.1 Protein Homology CDS 305205 305936 . + 0 ID=cds-WJG97261.1;Parent=gene-PUW34_01335;Dbxref=NCBI_GP:WJG97261.1;Name=WJG97261.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=PUW34_01335;product=DNA polymerase III subunit epsilon;protein_id=WJG97261.1;transl_table=11 CP118122.1 Genbank gene 306070 306146 . + . ID=gene-PUW34_01340;Name=PUW34_01340;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_01340 CP118122.1 tRNAscan-SE tRNA 306070 306146 . + . ID=rna-PUW34_01340;Parent=gene-PUW34_01340;anticodon=(pos:306104..306106);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01340;product=tRNA-Asp CP118122.1 tRNAscan-SE exon 306070 306146 . + . ID=exon-PUW34_01340-1;Parent=rna-PUW34_01340;anticodon=(pos:306104..306106);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01340;product=tRNA-Asp CP118122.1 Genbank gene 306286 307131 . - . ID=gene-PUW34_01345;Name=PUW34_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01345 CP118122.1 Protein Homology CDS 306286 307131 . - 0 ID=cds-WJG97262.1;Parent=gene-PUW34_01345;Dbxref=NCBI_GP:WJG97262.1;Name=WJG97262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289296.1;locus_tag=PUW34_01345;product=DUF4942 domain-containing protein;protein_id=WJG97262.1;transl_table=11 CP118122.1 Genbank gene 307209 307403 . - . ID=gene-PUW34_01350;Name=PUW34_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01350 CP118122.1 Protein Homology CDS 307209 307403 . - 0 ID=cds-WJG97263.1;Parent=gene-PUW34_01350;Dbxref=NCBI_GP:WJG97263.1;Name=WJG97263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750277.1;locus_tag=PUW34_01350;product=DUF957 domain-containing protein;protein_id=WJG97263.1;transl_table=11 CP118122.1 Genbank gene 307429 307920 . - . ID=gene-PUW34_01355;Name=PUW34_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01355 CP118122.1 Protein Homology CDS 307429 307920 . - 0 ID=cds-WJG97264.1;Parent=gene-PUW34_01355;Dbxref=NCBI_GP:WJG97264.1;Name=WJG97264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392970.1;locus_tag=PUW34_01355;product=DUF5983 family protein;protein_id=WJG97264.1;transl_table=11 CP118122.1 Genbank gene 307868 308293 . - . ID=gene-PUW34_01360;Name=PUW34_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01360 CP118122.1 Protein Homology CDS 307868 308293 . - 0 ID=cds-WJG97265.1;Parent=gene-PUW34_01360;Dbxref=NCBI_GP:WJG97265.1;Name=WJG97265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166552.1;locus_tag=PUW34_01360;product=TA system toxin CbtA family protein;protein_id=WJG97265.1;transl_table=11 CP118122.1 Genbank gene 308352 308996 . - . ID=gene-PUW34_01365;Name=PUW34_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01365 CP118122.1 Protein Homology CDS 308352 308996 . - 0 ID=cds-WJG97266.1;Parent=gene-PUW34_01365;Dbxref=NCBI_GP:WJG97266.1;Name=WJG97266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086751.1;locus_tag=PUW34_01365;product=antitoxin of toxin-antitoxin stability system;protein_id=WJG97266.1;transl_table=11 CP118122.1 Genbank gene 308993 309364 . - . ID=gene-PUW34_01370;Name=PUW34_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01370 CP118122.1 Protein Homology CDS 308993 309364 . - 0 ID=cds-WJG97267.1;Parent=gene-PUW34_01370;Dbxref=NCBI_GP:WJG97267.1;Name=WJG97267.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158818.1;locus_tag=PUW34_01370;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WJG97267.1;transl_table=11 CP118122.1 Genbank gene 309336 309704 . - . ID=gene-PUW34_01375;Name=PUW34_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01375 CP118122.1 Protein Homology CDS 309336 309704 . - 0 ID=cds-WJG97268.1;Parent=gene-PUW34_01375;Dbxref=NCBI_GP:WJG97268.1;Name=WJG97268.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282843.1;locus_tag=PUW34_01375;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WJG97268.1;transl_table=11 CP118122.1 Genbank gene 309722 309943 . - . ID=gene-PUW34_01380;Name=PUW34_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01380 CP118122.1 Protein Homology CDS 309722 309943 . - 0 ID=cds-WJG97269.1;Parent=gene-PUW34_01380;Dbxref=NCBI_GP:WJG97269.1;Name=WJG97269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588435.1;locus_tag=PUW34_01380;product=DUF987 family protein;protein_id=WJG97269.1;transl_table=11 CP118122.1 Genbank gene 309940 310230 . - . ID=gene-PUW34_01385;Name=PUW34_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01385 CP118122.1 Protein Homology CDS 309940 310230 . - 0 ID=cds-WJG97270.1;Parent=gene-PUW34_01385;Dbxref=NCBI_GP:WJG97270.1;Name=WJG97270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001243218.1;locus_tag=PUW34_01385;product=hypothetical protein;protein_id=WJG97270.1;transl_table=11 CP118122.1 Genbank gene 310246 310725 . - . ID=gene-PUW34_01390;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PUW34_01390 CP118122.1 Protein Homology CDS 310246 310725 . - 0 ID=cds-WJG97271.1;Parent=gene-PUW34_01390;Dbxref=NCBI_GP:WJG97271.1;Name=WJG97271.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004109365.1;locus_tag=PUW34_01390;product=DNA repair protein RadC;protein_id=WJG97271.1;transl_table=11 CP118122.1 Genbank gene 310736 311194 . - . ID=gene-PUW34_01395;Name=PUW34_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01395 CP118122.1 Protein Homology CDS 310736 311194 . - 0 ID=cds-WJG97272.1;Parent=gene-PUW34_01395;Dbxref=NCBI_GP:WJG97272.1;Name=WJG97272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783821.1;locus_tag=PUW34_01395;product=antirestriction protein;protein_id=WJG97272.1;transl_table=11 CP118122.1 Genbank gene 311276 311659 . - . ID=gene-PUW34_01400;Name=PUW34_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01400 CP118122.1 Protein Homology CDS 311276 311659 . - 0 ID=cds-WJG97273.1;Parent=gene-PUW34_01400;Dbxref=NCBI_GP:WJG97273.1;Name=WJG97273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522007.1;locus_tag=PUW34_01400;product=hypothetical protein;protein_id=WJG97273.1;transl_table=11 CP118122.1 Genbank gene 312065 312883 . - . ID=gene-PUW34_01405;Name=PUW34_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01405 CP118122.1 Protein Homology CDS 312065 312883 . - 0 ID=cds-WJG97274.1;Parent=gene-PUW34_01405;Dbxref=NCBI_GP:WJG97274.1;Name=WJG97274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234406.1;locus_tag=PUW34_01405;product=DUF932 domain-containing protein;protein_id=WJG97274.1;transl_table=11 CP118122.1 Genbank gene 312989 313228 . - . ID=gene-PUW34_01410;Name=PUW34_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01410 CP118122.1 Protein Homology CDS 312989 313228 . - 0 ID=cds-WJG98891.1;Parent=gene-PUW34_01410;Dbxref=NCBI_GP:WJG98891.1;Name=WJG98891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374428.1;locus_tag=PUW34_01410;product=DUF905 family protein;protein_id=WJG98891.1;transl_table=11 CP118122.1 Genbank gene 313334 313747 . - . ID=gene-PUW34_01415;Name=PUW34_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01415 CP118122.1 Protein Homology CDS 313334 313747 . - 0 ID=cds-WJG97275.1;Parent=gene-PUW34_01415;Dbxref=NCBI_GP:WJG97275.1;Name=WJG97275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789534.1;locus_tag=PUW34_01415;product=hypothetical protein;protein_id=WJG97275.1;transl_table=11 CP118122.1 Genbank gene 314021 314560 . - . ID=gene-PUW34_01420;Name=PUW34_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01420 CP118122.1 Protein Homology CDS 314021 314560 . - 0 ID=cds-WJG97276.1;Parent=gene-PUW34_01420;Dbxref=NCBI_GP:WJG97276.1;Name=WJG97276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104019.1;locus_tag=PUW34_01420;product=DUF4339 domain-containing protein;protein_id=WJG97276.1;transl_table=11 CP118122.1 Genbank gene 314623 315075 . - . ID=gene-PUW34_01425;Name=PUW34_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01425 CP118122.1 Protein Homology CDS 314623 315075 . - 0 ID=cds-WJG97277.1;Parent=gene-PUW34_01425;Dbxref=NCBI_GP:WJG97277.1;Name=WJG97277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245672.1;locus_tag=PUW34_01425;product=hypothetical protein;protein_id=WJG97277.1;transl_table=11 CP118122.1 Genbank gene 315072 315524 . - . ID=gene-PUW34_01430;Name=PUW34_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01430 CP118122.1 Protein Homology CDS 315072 315524 . - 0 ID=cds-WJG97278.1;Parent=gene-PUW34_01430;Dbxref=NCBI_GP:WJG97278.1;Name=WJG97278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683446.1;locus_tag=PUW34_01430;product=hypothetical protein;protein_id=WJG97278.1;transl_table=11 CP118122.1 Genbank gene 315561 316127 . - . ID=gene-PUW34_01435;Name=PUW34_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01435 CP118122.1 Protein Homology CDS 315561 316127 . - 0 ID=cds-WJG97279.1;Parent=gene-PUW34_01435;Dbxref=NCBI_GP:WJG97279.1;Name=WJG97279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765651.1;locus_tag=PUW34_01435;product=hypothetical protein;protein_id=WJG97279.1;transl_table=11 CP118122.1 Genbank gene 316124 316837 . - . ID=gene-PUW34_01440;Name=PUW34_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01440 CP118122.1 Protein Homology CDS 316124 316837 . - 0 ID=cds-WJG97280.1;Parent=gene-PUW34_01440;Dbxref=NCBI_GP:WJG97280.1;Name=WJG97280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075759.1;locus_tag=PUW34_01440;product=WYL domain-containing protein;protein_id=WJG97280.1;transl_table=11 CP118122.1 Genbank pseudogene 317098 317973 . - . ID=gene-PUW34_01445;Name=PUW34_01445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01445;pseudo=true CP118122.1 Protein Homology CDS 317098 317973 . - 0 ID=cds-PUW34_01445;Parent=gene-PUW34_01445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165430.1;locus_tag=PUW34_01445;product=GTPase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 318511 318747 . + . ID=gene-PUW34_01450;Name=PUW34_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01450 CP118122.1 GeneMarkS-2+ CDS 318511 318747 . + 0 ID=cds-WJG97281.1;Parent=gene-PUW34_01450;Dbxref=NCBI_GP:WJG97281.1;Name=WJG97281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_01450;product=hypothetical protein;protein_id=WJG97281.1;transl_table=11 CP118122.1 Genbank gene 319320 320921 . + . ID=gene-PUW34_01455;Name=PUW34_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01455 CP118122.1 GeneMarkS-2+ CDS 319320 320921 . + 0 ID=cds-WJG99080.1;Parent=gene-PUW34_01455;Dbxref=NCBI_GP:WJG99080.1;Name=WJG99080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_01455;product=hypothetical protein;protein_id=WJG99080.1;transl_table=11 CP118122.1 Genbank gene 320909 321727 . + . ID=gene-PUW34_01460;Name=PUW34_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01460 CP118122.1 GeneMarkS-2+ CDS 320909 321727 . + 0 ID=cds-WJG97282.1;Parent=gene-PUW34_01460;Dbxref=NCBI_GP:WJG97282.1;Name=WJG97282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_01460;product=hypothetical protein;protein_id=WJG97282.1;transl_table=11 CP118122.1 Genbank gene 321835 322269 . + . ID=gene-PUW34_01465;Name=PUW34_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01465 CP118122.1 GeneMarkS-2+ CDS 321835 322269 . + 0 ID=cds-WJG97283.1;Parent=gene-PUW34_01465;Dbxref=NCBI_GP:WJG97283.1;Name=WJG97283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_01465;product=hypothetical protein;protein_id=WJG97283.1;transl_table=11 CP118122.1 Genbank pseudogene 322303 322608 . + . ID=gene-PUW34_01470;Name=PUW34_01470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01470;pseudo=true CP118122.1 Protein Homology CDS 322303 322608 . + 0 ID=cds-PUW34_01470;Parent=gene-PUW34_01470;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024486.2;locus_tag=PUW34_01470;product=AAA domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 322605 323165 . + . ID=gene-PUW34_01475;Name=PUW34_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01475 CP118122.1 Protein Homology CDS 322605 323165 . + 0 ID=cds-WJG97284.1;Parent=gene-PUW34_01475;Dbxref=NCBI_GP:WJG97284.1;Name=WJG97284.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024486.2;locus_tag=PUW34_01475;product=AAA domain-containing protein;protein_id=WJG97284.1;transl_table=11 CP118122.1 Genbank gene 323193 323993 . + . ID=gene-PUW34_01480;Name=PUW34_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01480 CP118122.1 Protein Homology CDS 323193 323993 . + 0 ID=cds-WJG97285.1;Parent=gene-PUW34_01480;Dbxref=NCBI_GP:WJG97285.1;Name=WJG97285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024487.2;locus_tag=PUW34_01480;product=AAA domain-containing protein;protein_id=WJG97285.1;transl_table=11 CP118122.1 Genbank gene 323990 325513 . + . ID=gene-PUW34_01485;Name=PUW34_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01485 CP118122.1 Protein Homology CDS 323990 325513 . + 0 ID=cds-WJG97286.1;Parent=gene-PUW34_01485;Dbxref=NCBI_GP:WJG97286.1;Name=WJG97286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631139.1;locus_tag=PUW34_01485;product=hypothetical protein;protein_id=WJG97286.1;transl_table=11 CP118122.1 Genbank gene 325831 327681 . - . ID=gene-PUW34_01490;Name=PUW34_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01490 CP118122.1 Protein Homology CDS 325831 327681 . - 0 ID=cds-WJG97287.1;Parent=gene-PUW34_01490;Dbxref=NCBI_GP:WJG97287.1;Name=WJG97287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556732.1;locus_tag=PUW34_01490;product=hypothetical protein;protein_id=WJG97287.1;transl_table=11 CP118122.1 Genbank gene 327785 328009 . + . ID=gene-PUW34_01495;Name=PUW34_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01495 CP118122.1 Protein Homology CDS 327785 328009 . + 0 ID=cds-WJG97288.1;Parent=gene-PUW34_01495;Dbxref=NCBI_GP:WJG97288.1;Name=WJG97288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532213.1;locus_tag=PUW34_01495;product=AlpA family phage regulatory protein;protein_id=WJG97288.1;transl_table=11 CP118122.1 Genbank gene 328034 329554 . + . ID=gene-PUW34_01500;Name=PUW34_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01500 CP118122.1 Protein Homology CDS 328034 329554 . + 0 ID=cds-WJG97289.1;Parent=gene-PUW34_01500;Dbxref=NCBI_GP:WJG97289.1;Name=WJG97289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778659.1;locus_tag=PUW34_01500;product=YfjI family protein;protein_id=WJG97289.1;transl_table=11 CP118122.1 Genbank pseudogene 329948 330403 . + . ID=gene-PUW34_01505;Name=PUW34_01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01505;pseudo=true CP118122.1 Protein Homology CDS 329948 330403 . + 0 ID=cds-PUW34_01505;Parent=gene-PUW34_01505;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023154.2;locus_tag=PUW34_01505;product=inovirus Gp2 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 330439 331203 . - . ID=gene-PUW34_01510;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=PUW34_01510 CP118122.1 Protein Homology CDS 330439 331203 . - 0 ID=cds-WJG97290.1;Parent=gene-PUW34_01510;Dbxref=NCBI_GP:WJG97290.1;Name=WJG97290.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806695.1;locus_tag=PUW34_01510;product=type VI secretion system-associated protein TagK;protein_id=WJG97290.1;transl_table=11 CP118122.1 Genbank pseudogene 331570 334369 . + . ID=gene-PUW34_01515;Name=PUW34_01515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01515;pseudo=true CP118122.1 Protein Homology CDS 331570 334369 . + 0 ID=cds-PUW34_01515;Parent=gene-PUW34_01515;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449788.1;locus_tag=PUW34_01515;product=AAA family ATPase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 334335 334700 . + . ID=gene-PUW34_01520;Name=PUW34_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01520 CP118122.1 Protein Homology CDS 334335 334700 . + 0 ID=cds-WJG97291.1;Parent=gene-PUW34_01520;Dbxref=NCBI_GP:WJG97291.1;Name=WJG97291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231281.1;locus_tag=PUW34_01520;product=hypothetical protein;protein_id=WJG97291.1;transl_table=11 CP118122.1 Genbank gene 335478 335798 . + . ID=gene-PUW34_01525;Name=PUW34_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01525 CP118122.1 Protein Homology CDS 335478 335798 . + 0 ID=cds-WJG97292.1;Parent=gene-PUW34_01525;Dbxref=NCBI_GP:WJG97292.1;Name=WJG97292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575643.1;locus_tag=PUW34_01525;product=Imm8 family immunity protein;protein_id=WJG97292.1;transl_table=11 CP118122.1 Genbank gene 335881 336015 . - . ID=gene-PUW34_01530;Name=PUW34_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01530 CP118122.1 Protein Homology CDS 335881 336015 . - 0 ID=cds-WJG97293.1;Parent=gene-PUW34_01530;Dbxref=NCBI_GP:WJG97293.1;Name=WJG97293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675090.1;locus_tag=PUW34_01530;product=hypothetical protein;protein_id=WJG97293.1;transl_table=11 CP118122.1 Genbank gene 336254 336370 . + . ID=gene-PUW34_01535;Name=PUW34_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01535 CP118122.1 Protein Homology CDS 336254 336370 . + 0 ID=cds-WJG97294.1;Parent=gene-PUW34_01535;Dbxref=NCBI_GP:WJG97294.1;Name=WJG97294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=PUW34_01535;product=hypothetical protein;protein_id=WJG97294.1;transl_table=11 CP118122.1 Genbank gene 336460 336693 . + . ID=gene-PUW34_01540;Name=PUW34_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01540 CP118122.1 GeneMarkS-2+ CDS 336460 336693 . + 0 ID=cds-WJG97295.1;Parent=gene-PUW34_01540;Dbxref=NCBI_GP:WJG97295.1;Name=WJG97295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_01540;product=hypothetical protein;protein_id=WJG97295.1;transl_table=11 CP118122.1 Genbank gene 337564 337962 . + . ID=gene-PUW34_01545;Name=PUW34_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01545 CP118122.1 Protein Homology CDS 337564 337962 . + 0 ID=cds-WJG97296.1;Parent=gene-PUW34_01545;Dbxref=NCBI_GP:WJG97296.1;Name=WJG97296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828181.1;locus_tag=PUW34_01545;product=sugar tyrosine-protein kinase;protein_id=WJG97296.1;transl_table=11 CP118122.1 Genbank gene 338348 338626 . + . ID=gene-PUW34_01550;Name=PUW34_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01550 CP118122.1 Protein Homology CDS 338348 338626 . + 0 ID=cds-WJG98892.1;Parent=gene-PUW34_01550;Dbxref=NCBI_GP:WJG98892.1;Name=WJG98892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=PUW34_01550;product=hypothetical protein;protein_id=WJG98892.1;transl_table=11 CP118122.1 Genbank gene 338758 339006 . - . ID=gene-PUW34_01555;Name=PUW34_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01555 CP118122.1 Protein Homology CDS 338758 339006 . - 0 ID=cds-WJG97297.1;Parent=gene-PUW34_01555;Dbxref=NCBI_GP:WJG97297.1;Name=WJG97297.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446753.1;locus_tag=PUW34_01555;product=SymE family type I addiction module toxin;protein_id=WJG97297.1;transl_table=11 CP118122.1 Genbank pseudogene 339059 339763 . + . ID=gene-PUW34_01560;Name=PUW34_01560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01560;pseudo=true CP118122.1 Protein Homology CDS 339059 339763 . + 0 ID=cds-PUW34_01560;Parent=gene-PUW34_01560;Note=frameshifted;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=PUW34_01560;product=integrase core domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 340385 340882 . + . ID=gene-PUW34_01565;Name=PUW34_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01565 CP118122.1 Protein Homology CDS 340385 340882 . + 0 ID=cds-WJG97298.1;Parent=gene-PUW34_01565;Dbxref=NCBI_GP:WJG97298.1;Name=WJG97298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789627.1;locus_tag=PUW34_01565;product=Saf-pilin pilus formation protein SafA;protein_id=WJG97298.1;transl_table=11 CP118122.1 Genbank gene 340957 341697 . + . ID=gene-PUW34_01570;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=PUW34_01570 CP118122.1 Protein Homology CDS 340957 341697 . + 0 ID=cds-WJG97299.1;Parent=gene-PUW34_01570;Dbxref=NCBI_GP:WJG97299.1;Name=WJG97299.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=PUW34_01570;product=pili assembly chaperone SafB;protein_id=WJG97299.1;transl_table=11 CP118122.1 Genbank pseudogene 341721 344202 . + . ID=gene-PUW34_01575;Name=PUW34_01575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01575;pseudo=true CP118122.1 Protein Homology CDS 341721 344202 . + 0 ID=cds-PUW34_01575;Parent=gene-PUW34_01575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=PUW34_01575;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 344224 344694 . + . ID=gene-PUW34_01580;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=PUW34_01580 CP118122.1 Protein Homology CDS 344224 344694 . + 0 ID=cds-WJG97300.1;Parent=gene-PUW34_01580;Dbxref=NCBI_GP:WJG97300.1;Name=WJG97300.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=PUW34_01580;product=AfaD family invasin;protein_id=WJG97300.1;transl_table=11 CP118122.1 Genbank pseudogene 345102 345922 . + . ID=gene-PUW34_01585;Name=PUW34_01585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01585;pseudo=true CP118122.1 Protein Homology CDS 345102 345922 . + 0 ID=cds-PUW34_01585;Parent=gene-PUW34_01585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=PUW34_01585;product=polysaccharide deacetylase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 346005 346245 . + . ID=gene-PUW34_01590;Name=PUW34_01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01590;pseudo=true CP118122.1 Protein Homology CDS 346005 346245 . + 0 ID=cds-PUW34_01590;Parent=gene-PUW34_01590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=PUW34_01590;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 346739 347680 . + . ID=gene-PUW34_01595;Name=PUW34_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01595 CP118122.1 Protein Homology CDS 346739 347680 . + 0 ID=cds-WJG97301.1;Parent=gene-PUW34_01595;Dbxref=NCBI_GP:WJG97301.1;Name=WJG97301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=PUW34_01595;product=LysR family transcriptional regulator;protein_id=WJG97301.1;transl_table=11 CP118122.1 Genbank gene 347797 348012 . + . ID=gene-PUW34_01600;Name=PUW34_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01600 CP118122.1 Protein Homology CDS 347797 348012 . + 0 ID=cds-WJG97302.1;Parent=gene-PUW34_01600;Dbxref=NCBI_GP:WJG97302.1;Name=WJG97302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=PUW34_01600;product=hypothetical protein;protein_id=WJG97302.1;transl_table=11 CP118122.1 Genbank gene 348016 348735 . - . ID=gene-PUW34_01605;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=PUW34_01605 CP118122.1 Protein Homology CDS 348016 348735 . - 0 ID=cds-WJG97303.1;Parent=gene-PUW34_01605;Dbxref=NCBI_GP:WJG97303.1;Name=WJG97303.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=PUW34_01605;product=adhesin/invasin protein PagN;protein_id=WJG97303.1;transl_table=11 CP118122.1 Genbank gene 349066 349473 . - . ID=gene-PUW34_01610;Name=PUW34_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01610 CP118122.1 Protein Homology CDS 349066 349473 . - 0 ID=cds-WJG97304.1;Parent=gene-PUW34_01610;Dbxref=NCBI_GP:WJG97304.1;Name=WJG97304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=PUW34_01610;product=Spy/CpxP family protein refolding chaperone;protein_id=WJG97304.1;transl_table=11 CP118122.1 Genbank gene 349844 350611 . - . ID=gene-PUW34_01615;Name=PUW34_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01615 CP118122.1 Protein Homology CDS 349844 350611 . - 0 ID=cds-WJG97305.1;Parent=gene-PUW34_01615;Dbxref=NCBI_GP:WJG97305.1;Name=WJG97305.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=PUW34_01615;product=amidohydrolase;protein_id=WJG97305.1;transl_table=11 CP118122.1 Genbank gene 350720 353164 . - . ID=gene-PUW34_01620;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=PUW34_01620 CP118122.1 Protein Homology CDS 350720 353164 . - 0 ID=cds-WJG97306.1;Parent=gene-PUW34_01620;Dbxref=NCBI_GP:WJG97306.1;Name=WJG97306.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=PUW34_01620;product=acyl-CoA dehydrogenase FadE;protein_id=WJG97306.1;transl_table=11 CP118122.1 Genbank pseudogene 353404 353981 . + . ID=gene-PUW34_01625;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=pseudogene;locus_tag=PUW34_01625;pseudo=true CP118122.1 Protein Homology CDS 353404 353981 . + 0 ID=cds-PUW34_01625;Parent=gene-PUW34_01625;Note=frameshifted;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=PUW34_01625;product=D-sedoheptulose 7-phosphate isomerase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 354194 354960 . + . ID=gene-PUW34_01630;Name=PUW34_01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01630;pseudo=true CP118122.1 Protein Homology CDS 354194 354960 . + 0 ID=cds-PUW34_01630;Parent=gene-PUW34_01630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=PUW34_01630;product=class II glutamine amidotransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 354931 355671 . - . ID=gene-PUW34_01635;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=PUW34_01635 CP118122.1 Protein Homology CDS 354931 355671 . - 0 ID=cds-WJG97307.1;Parent=gene-PUW34_01635;Dbxref=NCBI_GP:WJG97307.1;Name=WJG97307.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=PUW34_01635;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WJG97307.1;transl_table=11 CP118122.1 Genbank gene 355921 356976 . + . ID=gene-PUW34_01640;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=PUW34_01640 CP118122.1 Protein Homology CDS 355921 356976 . + 0 ID=cds-WJG97308.1;Parent=gene-PUW34_01640;Dbxref=NCBI_GP:WJG97308.1;Name=WJG97308.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=PUW34_01640;product=DNA polymerase IV;protein_id=WJG97308.1;transl_table=11 CP118122.1 Genbank gene 357195 358334 . + . ID=gene-PUW34_01645;Name=PUW34_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01645 CP118122.1 Protein Homology CDS 357195 358334 . + 0 ID=cds-WJG97309.1;Parent=gene-PUW34_01645;Dbxref=NCBI_GP:WJG97309.1;Name=WJG97309.1;Ontology_term=GO:0006415,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=PUW34_01645;product=RNA ligase RtcB family protein;protein_id=WJG97309.1;transl_table=11 CP118122.1 Genbank gene 358331 358945 . + . ID=gene-PUW34_01650;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=PUW34_01650 CP118122.1 Protein Homology CDS 358331 358945 . + 0 ID=cds-WJG97310.1;Parent=gene-PUW34_01650;Dbxref=NCBI_GP:WJG97310.1;Name=WJG97310.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=PUW34_01650;product=peptide chain release factor H;protein_id=WJG97310.1;transl_table=11 CP118122.1 Genbank gene 359100 360557 . - . ID=gene-PUW34_01655;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=PUW34_01655 CP118122.1 Protein Homology CDS 359100 360557 . - 0 ID=cds-WJG97311.1;Parent=gene-PUW34_01655;Dbxref=NCBI_GP:WJG97311.1;Name=WJG97311.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=PUW34_01655;product=cytosol nonspecific dipeptidase;protein_id=WJG97311.1;transl_table=11 CP118122.1 Genbank gene 360806 361264 . + . ID=gene-PUW34_01660;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=PUW34_01660 CP118122.1 Protein Homology CDS 360806 361264 . + 0 ID=cds-WJG97312.1;Parent=gene-PUW34_01660;Dbxref=NCBI_GP:WJG97312.1;Name=WJG97312.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=PUW34_01660;product=xanthine phosphoribosyltransferase;protein_id=WJG97312.1;transl_table=11 CP118122.1 Genbank gene 361353 362597 . + . ID=gene-PUW34_01665;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=PUW34_01665 CP118122.1 Protein Homology CDS 361353 362597 . + 0 ID=cds-WJG97313.1;Parent=gene-PUW34_01665;Dbxref=NCBI_GP:WJG97313.1;Name=WJG97313.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=PUW34_01665;product=esterase FrsA;protein_id=WJG97313.1;transl_table=11 CP118122.1 Genbank gene 362655 363056 . + . ID=gene-PUW34_01670;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=PUW34_01670 CP118122.1 Protein Homology CDS 362655 363056 . + 0 ID=cds-WJG97314.1;Parent=gene-PUW34_01670;Dbxref=NCBI_GP:WJG97314.1;Name=WJG97314.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=PUW34_01670;product=sigma factor-binding protein Crl;protein_id=WJG97314.1;transl_table=11 CP118122.1 Genbank pseudogene 363107 364159 . - . ID=gene-PUW34_01675;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=pseudogene;locus_tag=PUW34_01675;pseudo=true CP118122.1 Protein Homology CDS 363107 364159 . - 0 ID=cds-PUW34_01675;Parent=gene-PUW34_01675;Note=internal stop;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=PUW34_01675;product=phosphoporin PhoE;pseudo=true;transl_table=11 CP118122.1 Genbank gene 364442 365545 . + . ID=gene-PUW34_01680;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=PUW34_01680 CP118122.1 Protein Homology CDS 364442 365545 . + 0 ID=cds-WJG97315.1;Parent=gene-PUW34_01680;Dbxref=NCBI_GP:WJG97315.1;Name=WJG97315.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=PUW34_01680;product=glutamate 5-kinase;protein_id=WJG97315.1;transl_table=11 CP118122.1 Genbank gene 365557 366804 . + . ID=gene-PUW34_01685;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=PUW34_01685 CP118122.1 Protein Homology CDS 365557 366804 . + 0 ID=cds-WJG97316.1;Parent=gene-PUW34_01685;Dbxref=NCBI_GP:WJG97316.1;Name=WJG97316.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=PUW34_01685;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WJG97316.1;transl_table=11 CP118122.1 Genbank gene 366920 366995 . + . ID=gene-PUW34_01690;Name=PUW34_01690;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_01690 CP118122.1 tRNAscan-SE tRNA 366920 366995 . + . ID=rna-PUW34_01690;Parent=gene-PUW34_01690;anticodon=(pos:366953..366955);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01690;product=tRNA-Thr CP118122.1 tRNAscan-SE exon 366920 366995 . + . ID=exon-PUW34_01690-1;Parent=rna-PUW34_01690;anticodon=(pos:366953..366955);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_01690;product=tRNA-Thr CP118122.1 Genbank pseudogene 367159 367365 . + . ID=gene-PUW34_01695;Name=PUW34_01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01695;pseudo=true CP118122.1 Protein Homology CDS 367159 367365 . + 0 ID=cds-PUW34_01695;Parent=gene-PUW34_01695;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=PUW34_01695;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 367360 368066 . - . ID=gene-PUW34_01700;Name=PUW34_01700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01700;pseudo=true CP118122.1 Protein Homology CDS 367360 368066 . - 0 ID=cds-PUW34_01700;Parent=gene-PUW34_01700;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW34_01700;product=IS3 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 368133 368477 . + . ID=gene-PUW34_01705;Name=PUW34_01705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01705;pseudo=true CP118122.1 Protein Homology CDS 368133 368477 . + 0 ID=cds-PUW34_01705;Parent=gene-PUW34_01705;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=PUW34_01705;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 368467 368574 . + . ID=gene-PUW34_01710;Name=PUW34_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01710 CP118122.1 Protein Homology CDS 368467 368574 . + 0 ID=cds-WJG98893.1;Parent=gene-PUW34_01710;Dbxref=NCBI_GP:WJG98893.1;Name=WJG98893.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.2;locus_tag=PUW34_01710;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=WJG98893.1;transl_table=11 CP118122.1 Genbank gene 368684 369007 . + . ID=gene-PUW34_01715;Name=PUW34_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01715 CP118122.1 Protein Homology CDS 368684 369007 . + 0 ID=cds-WJG97317.1;Parent=gene-PUW34_01715;Dbxref=NCBI_GP:WJG97317.1;Name=WJG97317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=PUW34_01715;product=DUF1889 family protein;protein_id=WJG97317.1;transl_table=11 CP118122.1 Genbank gene 369349 370587 . + . ID=gene-PUW34_01720;Name=PUW34_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01720 CP118122.1 Protein Homology CDS 369349 370587 . + 0 ID=cds-WJG98894.1;Parent=gene-PUW34_01720;Dbxref=NCBI_GP:WJG98894.1;Name=WJG98894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=PUW34_01720;product=MFS transporter;protein_id=WJG98894.1;transl_table=11 CP118122.1 Genbank gene 370718 372139 . + . ID=gene-PUW34_01725;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PUW34_01725 CP118122.1 Protein Homology CDS 370718 372139 . + 0 ID=cds-WJG97318.1;Parent=gene-PUW34_01725;Dbxref=NCBI_GP:WJG97318.1;Name=WJG97318.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=PUW34_01725;product=3-isopropylmalate dehydratase large subunit;protein_id=WJG97318.1;transl_table=11 CP118122.1 Genbank gene 372141 372767 . + . ID=gene-PUW34_01730;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PUW34_01730 CP118122.1 Protein Homology CDS 372141 372767 . + 0 ID=cds-WJG97319.1;Parent=gene-PUW34_01730;Dbxref=NCBI_GP:WJG97319.1;Name=WJG97319.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=PUW34_01730;product=3-isopropylmalate dehydratase small subunit;protein_id=WJG97319.1;transl_table=11 CP118122.1 Genbank gene 372782 373660 . + . ID=gene-PUW34_01735;Name=PUW34_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01735 CP118122.1 Protein Homology CDS 372782 373660 . + 0 ID=cds-WJG97320.1;Parent=gene-PUW34_01735;Dbxref=NCBI_GP:WJG97320.1;Name=WJG97320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=PUW34_01735;product=fumarylacetoacetate hydrolase family protein;protein_id=WJG97320.1;transl_table=11 CP118122.1 Genbank gene 373660 374574 . + . ID=gene-PUW34_01740;Name=PUW34_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01740 CP118122.1 Protein Homology CDS 373660 374574 . + 0 ID=cds-WJG97321.1;Parent=gene-PUW34_01740;Dbxref=NCBI_GP:WJG97321.1;Name=WJG97321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=PUW34_01740;product=alpha/beta hydrolase;protein_id=WJG97321.1;transl_table=11 CP118122.1 Genbank gene 374608 375573 . + . ID=gene-PUW34_01745;Name=PUW34_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01745 CP118122.1 Protein Homology CDS 374608 375573 . + 0 ID=cds-WJG97322.1;Parent=gene-PUW34_01745;Dbxref=NCBI_GP:WJG97322.1;Name=WJG97322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=PUW34_01745;product=LysR family transcriptional regulator;protein_id=WJG97322.1;transl_table=11 CP118122.1 Genbank gene 375518 375790 . - . ID=gene-PUW34_01750;Name=PUW34_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01750 CP118122.1 Protein Homology CDS 375518 375790 . - 0 ID=cds-WJG97323.1;Parent=gene-PUW34_01750;Dbxref=NCBI_GP:WJG97323.1;Name=WJG97323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=PUW34_01750;product=cytoplasmic protein;protein_id=WJG97323.1;transl_table=11 CP118122.1 Genbank gene 376481 376879 . + . ID=gene-PUW34_01755;Name=PUW34_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01755 CP118122.1 Protein Homology CDS 376481 376879 . + 0 ID=cds-WJG97324.1;Parent=gene-PUW34_01755;Dbxref=NCBI_GP:WJG97324.1;Name=WJG97324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=PUW34_01755;product=outer membrane protein;protein_id=WJG97324.1;transl_table=11 CP118122.1 Genbank gene 376926 377684 . - . ID=gene-PUW34_01760;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=PUW34_01760 CP118122.1 Protein Homology CDS 376926 377684 . - 0 ID=cds-WJG97325.1;Parent=gene-PUW34_01760;Dbxref=NCBI_GP:WJG97325.1;Name=WJG97325.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=PUW34_01760;product=fimbrial biogenesis chaperone StbE;protein_id=WJG97325.1;transl_table=11 CP118122.1 Genbank gene 377650 378975 . - . ID=gene-PUW34_01765;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=PUW34_01765 CP118122.1 Protein Homology CDS 377650 378975 . - 0 ID=cds-WJG97326.1;Parent=gene-PUW34_01765;Dbxref=NCBI_GP:WJG97326.1;Name=WJG97326.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=PUW34_01765;product=fimbrial usher protein StbD;protein_id=WJG97326.1;transl_table=11 CP118122.1 Genbank pseudogene 378980 381541 . - . ID=gene-PUW34_01770;Name=PUW34_01770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01770;pseudo=true CP118122.1 Protein Homology CDS 378980 381541 . - 0 ID=cds-PUW34_01770;Parent=gene-PUW34_01770;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=PUW34_01770;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 381525 382286 . - . ID=gene-PUW34_01775;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=PUW34_01775 CP118122.1 Protein Homology CDS 381525 382286 . - 0 ID=cds-WJG97327.1;Parent=gene-PUW34_01775;Dbxref=NCBI_GP:WJG97327.1;Name=WJG97327.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=PUW34_01775;product=fimbrial biogenesis chaperone StbB;protein_id=WJG97327.1;transl_table=11 CP118122.1 Genbank gene 382348 382884 . - . ID=gene-PUW34_01780;Name=PUW34_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01780 CP118122.1 Protein Homology CDS 382348 382884 . - 0 ID=cds-WJG97328.1;Parent=gene-PUW34_01780;Dbxref=NCBI_GP:WJG97328.1;Name=WJG97328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=PUW34_01780;product=fimbrial protein;protein_id=WJG97328.1;transl_table=11 CP118122.1 Genbank gene 383547 383882 . + . ID=gene-PUW34_01785;Name=PUW34_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01785 CP118122.1 GeneMarkS-2+ CDS 383547 383882 . + 0 ID=cds-WJG97329.1;Parent=gene-PUW34_01785;Dbxref=NCBI_GP:WJG97329.1;Name=WJG97329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_01785;product=hypothetical protein;protein_id=WJG97329.1;transl_table=11 CP118122.1 Genbank gene 383885 384280 . + . ID=gene-PUW34_01790;Name=PUW34_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01790 CP118122.1 GeneMarkS-2+ CDS 383885 384280 . + 0 ID=cds-WJG97330.1;Parent=gene-PUW34_01790;Dbxref=NCBI_GP:WJG97330.1;Name=WJG97330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_01790;product=hypothetical protein;protein_id=WJG97330.1;transl_table=11 CP118122.1 Genbank gene 384253 384552 . + . ID=gene-PUW34_01795;Name=PUW34_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01795 CP118122.1 Protein Homology CDS 384253 384552 . + 0 ID=cds-WJG97331.1;Parent=gene-PUW34_01795;Dbxref=NCBI_GP:WJG97331.1;Name=WJG97331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=PUW34_01795;product=hypothetical protein;protein_id=WJG97331.1;transl_table=11 CP118122.1 Genbank gene 385054 386628 . + . ID=gene-PUW34_01800;Name=PUW34_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01800 CP118122.1 Protein Homology CDS 385054 386628 . + 0 ID=cds-WJG97332.1;Parent=gene-PUW34_01800;Dbxref=NCBI_GP:WJG97332.1;Name=WJG97332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=PUW34_01800;product=cyclic diguanylate phosphodiesterase;protein_id=WJG97332.1;transl_table=11 CP118122.1 Genbank pseudogene 386728 387470 . + . ID=gene-PUW34_01805;Name=PUW34_01805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01805;pseudo=true CP118122.1 Protein Homology CDS 386728 387470 . + 0 ID=cds-PUW34_01805;Parent=gene-PUW34_01805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=PUW34_01805;product=response regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 387443 387931 . + . ID=gene-PUW34_01810;Name=PUW34_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01810 CP118122.1 Protein Homology CDS 387443 387931 . + 0 ID=cds-WJG97333.1;Parent=gene-PUW34_01810;Dbxref=NCBI_GP:WJG97333.1;Name=WJG97333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=PUW34_01810;product=hypothetical protein;protein_id=WJG97333.1;transl_table=11 CP118122.1 Genbank gene 388331 388855 . + . ID=gene-PUW34_01815;Name=PUW34_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01815 CP118122.1 Protein Homology CDS 388331 388855 . + 0 ID=cds-WJG97334.1;Parent=gene-PUW34_01815;Dbxref=NCBI_GP:WJG97334.1;Name=WJG97334.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=PUW34_01815;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WJG97334.1;transl_table=11 CP118122.1 Genbank pseudogene 388999 389638 . + . ID=gene-PUW34_01820;Name=PUW34_01820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01820;pseudo=true CP118122.1 Protein Homology CDS 388999 389638 . + 0 ID=cds-PUW34_01820;Parent=gene-PUW34_01820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=PUW34_01820;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 389649 389873 . + . ID=gene-PUW34_01825;Name=PUW34_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01825 CP118122.1 Protein Homology CDS 389649 389873 . + 0 ID=cds-WJG97335.1;Parent=gene-PUW34_01825;Dbxref=NCBI_GP:WJG97335.1;Name=WJG97335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=PUW34_01825;product=hypothetical protein;protein_id=WJG97335.1;transl_table=11 CP118122.1 Genbank gene 389931 390290 . + . ID=gene-PUW34_01830;Name=PUW34_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01830 CP118122.1 Protein Homology CDS 389931 390290 . + 0 ID=cds-WJG97336.1;Parent=gene-PUW34_01830;Dbxref=NCBI_GP:WJG97336.1;Name=WJG97336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=PUW34_01830;product=DUF4156 domain-containing protein;protein_id=WJG97336.1;transl_table=11 CP118122.1 Genbank gene 390360 391817 . - . ID=gene-PUW34_01835;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=PUW34_01835 CP118122.1 Protein Homology CDS 390360 391817 . - 0 ID=cds-WJG97337.1;Parent=gene-PUW34_01835;Dbxref=NCBI_GP:WJG97337.1;Name=WJG97337.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=PUW34_01835;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WJG97337.1;transl_table=11 CP118122.1 Genbank gene 391834 395001 . - . ID=gene-PUW34_01840;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=PUW34_01840 CP118122.1 Protein Homology CDS 391834 395001 . - 0 ID=cds-WJG97338.1;Parent=gene-PUW34_01840;Dbxref=NCBI_GP:WJG97338.1;Name=WJG97338.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=PUW34_01840;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WJG97338.1;transl_table=11 CP118122.1 Genbank gene 394998 396224 . - . ID=gene-PUW34_01845;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=PUW34_01845 CP118122.1 Protein Homology CDS 394998 396224 . - 0 ID=cds-WJG97339.1;Parent=gene-PUW34_01845;Dbxref=NCBI_GP:WJG97339.1;Name=WJG97339.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=PUW34_01845;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WJG97339.1;transl_table=11 CP118122.1 Genbank pseudogene 396501 398803 . + . ID=gene-PUW34_01850;Name=golT;gbkey=Gene;gene=golT;gene_biotype=pseudogene;locus_tag=PUW34_01850;pseudo=true CP118122.1 Protein Homology CDS 396501 398803 . + 0 ID=cds-PUW34_01850;Parent=gene-PUW34_01850;Note=frameshifted;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083300.1;locus_tag=PUW34_01850;product=gold/copper-translocating P-type ATPase GolT;pseudo=true;transl_table=11 CP118122.1 Genbank gene 398800 399264 . + . ID=gene-PUW34_01855;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=PUW34_01855 CP118122.1 Protein Homology CDS 398800 399264 . + 0 ID=cds-WJG97340.1;Parent=gene-PUW34_01855;Dbxref=NCBI_GP:WJG97340.1;Name=WJG97340.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=PUW34_01855;product=Au(I) sensor transcriptional regulator GolS;protein_id=WJG97340.1;transl_table=11 CP118122.1 Genbank gene 399342 399536 . + . ID=gene-PUW34_01860;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=PUW34_01860 CP118122.1 Protein Homology CDS 399342 399536 . + 0 ID=cds-WJG97341.1;Parent=gene-PUW34_01860;Dbxref=NCBI_GP:WJG97341.1;Name=WJG97341.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=PUW34_01860;product=gold resistance metallochaperone GolB;protein_id=WJG97341.1;transl_table=11 CP118122.1 Genbank gene 399828 401081 . + . ID=gene-PUW34_01865;Name=PUW34_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01865 CP118122.1 Protein Homology CDS 399828 401081 . + 0 ID=cds-WJG97342.1;Parent=gene-PUW34_01865;Dbxref=NCBI_GP:WJG97342.1;Name=WJG97342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=PUW34_01865;product=MFS transporter;protein_id=WJG97342.1;transl_table=11 CP118122.1 Genbank pseudogene 401270 403223 . + . ID=gene-PUW34_01870;Name=PUW34_01870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01870;pseudo=true CP118122.1 Protein Homology CDS 401270 403223 . + 0 ID=cds-PUW34_01870;Parent=gene-PUW34_01870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=PUW34_01870;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 403233 406205 . + . ID=gene-PUW34_01875;Name=PUW34_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01875 CP118122.1 Protein Homology CDS 403233 406205 . + 0 ID=cds-WJG98895.1;Parent=gene-PUW34_01875;Dbxref=NCBI_GP:WJG98895.1;Name=WJG98895.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=PUW34_01875;product=type III restriction-modification system endonuclease;protein_id=WJG98895.1;transl_table=11 CP118122.1 Genbank gene 406482 406583 . + . ID=gene-PUW34_01880;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=PUW34_01880 CP118122.1 Protein Homology CDS 406482 406583 . + 0 ID=cds-WJG97343.1;Parent=gene-PUW34_01880;Dbxref=NCBI_GP:WJG97343.1;Name=WJG97343.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=PUW34_01880;product=small effector SsaA;protein_id=WJG97343.1;transl_table=11 CP118122.1 Genbank gene 406700 408103 . + . ID=gene-PUW34_01885;Name=PUW34_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01885 CP118122.1 Protein Homology CDS 406700 408103 . + 0 ID=cds-WJG97344.1;Parent=gene-PUW34_01885;Dbxref=NCBI_GP:WJG97344.1;Name=WJG97344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=PUW34_01885;product=cytochrome ubiquinol oxidase subunit I;protein_id=WJG97344.1;transl_table=11 CP118122.1 Genbank gene 408100 409110 . + . ID=gene-PUW34_01890;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PUW34_01890 CP118122.1 Protein Homology CDS 408100 409110 . + 0 ID=cds-WJG97345.1;Parent=gene-PUW34_01890;Dbxref=NCBI_GP:WJG97345.1;Name=WJG97345.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=PUW34_01890;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WJG97345.1;transl_table=11 CP118122.1 Genbank gene 409110 409241 . + . ID=gene-PUW34_01895;Name=PUW34_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01895 CP118122.1 Protein Homology CDS 409110 409241 . + 0 ID=cds-WJG97346.1;Parent=gene-PUW34_01895;Dbxref=NCBI_GP:WJG97346.1;Name=WJG97346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241460.1;locus_tag=PUW34_01895;product=DUF2474 domain-containing protein;protein_id=WJG97346.1;transl_table=11 CP118122.1 Genbank pseudogene 409448 410453 . + . ID=gene-PUW34_01900;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=pseudogene;locus_tag=PUW34_01900;pseudo=true CP118122.1 Protein Homology CDS 409448 410453 . + 0 ID=cds-PUW34_01900;Parent=gene-PUW34_01900;Note=frameshifted;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=PUW34_01900;product=ferrioxamine uptake transcriptional regulator FoxR;pseudo=true;transl_table=11 CP118122.1 Genbank gene 410599 412707 . + . ID=gene-PUW34_01905;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=PUW34_01905 CP118122.1 Protein Homology CDS 410599 412707 . + 0 ID=cds-WJG97347.1;Parent=gene-PUW34_01905;Dbxref=NCBI_GP:WJG97347.1;Name=WJG97347.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=PUW34_01905;product=ferrioxamine B receptor FoxA;protein_id=WJG97347.1;transl_table=11 CP118122.1 Genbank gene 412748 413380 . - . ID=gene-PUW34_01910;Name=PUW34_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01910 CP118122.1 Protein Homology CDS 412748 413380 . - 0 ID=cds-WJG97348.1;Parent=gene-PUW34_01910;Dbxref=NCBI_GP:WJG97348.1;Name=WJG97348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=PUW34_01910;product=LysE family transporter;protein_id=WJG97348.1;transl_table=11 CP118122.1 Genbank gene 413612 413887 . + . ID=gene-PUW34_01915;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=PUW34_01915 CP118122.1 Protein Homology CDS 413612 413887 . + 0 ID=cds-WJG97349.1;Parent=gene-PUW34_01915;Dbxref=NCBI_GP:WJG97349.1;Name=WJG97349.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=PUW34_01915;product=DUF1471 family periplasmic protein YahO;protein_id=WJG97349.1;transl_table=11 CP118122.1 Genbank gene 414023 415648 . - . ID=gene-PUW34_01920;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=PUW34_01920 CP118122.1 Protein Homology CDS 414023 415648 . - 0 ID=cds-WJG97350.1;Parent=gene-PUW34_01920;Dbxref=NCBI_GP:WJG97350.1;Name=WJG97350.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=PUW34_01920;product=propionate catabolism operon regulatory protein PrpR;protein_id=WJG97350.1;transl_table=11 CP118122.1 Genbank gene 415914 416801 . + . ID=gene-PUW34_01925;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=PUW34_01925 CP118122.1 Protein Homology CDS 415914 416801 . + 0 ID=cds-WJG97351.1;Parent=gene-PUW34_01925;Dbxref=NCBI_GP:WJG97351.1;Name=WJG97351.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=PUW34_01925;product=methylisocitrate lyase;protein_id=WJG97351.1;transl_table=11 CP118122.1 Genbank gene 416924 418093 . + . ID=gene-PUW34_01930;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=PUW34_01930 CP118122.1 Protein Homology CDS 416924 418093 . + 0 ID=cds-WJG97352.1;Parent=gene-PUW34_01930;Dbxref=NCBI_GP:WJG97352.1;Name=WJG97352.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=PUW34_01930;product=2-methylcitrate synthase;protein_id=WJG97352.1;transl_table=11 CP118122.1 Genbank gene 418131 419582 . + . ID=gene-PUW34_01935;Name=PUW34_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01935 CP118122.1 Protein Homology CDS 418131 419582 . + 0 ID=cds-WJG97353.1;Parent=gene-PUW34_01935;Dbxref=NCBI_GP:WJG97353.1;Name=WJG97353.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=PUW34_01935;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WJG97353.1;transl_table=11 CP118122.1 Genbank gene 419623 421509 . + . ID=gene-PUW34_01940;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=PUW34_01940 CP118122.1 Protein Homology CDS 419623 421509 . + 0 ID=cds-WJG97354.1;Parent=gene-PUW34_01940;Dbxref=NCBI_GP:WJG97354.1;Name=WJG97354.1;Ontology_term=GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=PUW34_01940;product=propionate--CoA ligase;protein_id=WJG97354.1;transl_table=11 CP118122.1 Genbank gene 421613 422587 . - . ID=gene-PUW34_01945;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=PUW34_01945 CP118122.1 Protein Homology CDS 421613 422587 . - 0 ID=cds-WJG97355.1;Parent=gene-PUW34_01945;Dbxref=NCBI_GP:WJG97355.1;Name=WJG97355.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=PUW34_01945;product=porphobilinogen synthase;protein_id=WJG97355.1;transl_table=11 CP118122.1 Genbank gene 423101 426115 . + . ID=gene-PUW34_01950;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=PUW34_01950 CP118122.1 Protein Homology CDS 423101 426115 . + 0 ID=cds-WJG97356.1;Parent=gene-PUW34_01950;Dbxref=NCBI_GP:WJG97356.1;Name=WJG97356.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556401.1;locus_tag=PUW34_01950;product=autotransporter adhesin EhaB;protein_id=WJG97356.1;transl_table=11 CP118122.1 Genbank gene 426201 426824 . + . ID=gene-PUW34_01955;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=PUW34_01955 CP118122.1 Protein Homology CDS 426201 426824 . + 0 ID=cds-WJG97357.1;Parent=gene-PUW34_01955;Dbxref=NCBI_GP:WJG97357.1;Name=WJG97357.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=PUW34_01955;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WJG97357.1;transl_table=11 CP118122.1 Genbank gene 426869 428026 . - . ID=gene-PUW34_01960;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=PUW34_01960 CP118122.1 Protein Homology CDS 426869 428026 . - 0 ID=cds-WJG97358.1;Parent=gene-PUW34_01960;Dbxref=NCBI_GP:WJG97358.1;Name=WJG97358.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=PUW34_01960;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WJG97358.1;transl_table=11 CP118122.1 Genbank gene 428373 429593 . + . ID=gene-PUW34_01965;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=PUW34_01965 CP118122.1 Protein Homology CDS 428373 429593 . + 0 ID=cds-WJG98896.1;Parent=gene-PUW34_01965;Dbxref=NCBI_GP:WJG98896.1;Name=WJG98896.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=PUW34_01965;product=peptide antibiotic transporter SbmA;protein_id=WJG98896.1;transl_table=11 CP118122.1 Genbank pseudogene 429743 430701 . + . ID=gene-PUW34_01970;Name=PUW34_01970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01970;pseudo=true CP118122.1 Protein Homology CDS 429743 430701 . + 0 ID=cds-PUW34_01970;Parent=gene-PUW34_01970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019379.2;locus_tag=PUW34_01970;product=DUF1615 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 430739 431047 . - . ID=gene-PUW34_01975;Name=PUW34_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01975 CP118122.1 Protein Homology CDS 430739 431047 . - 0 ID=cds-WJG97359.1;Parent=gene-PUW34_01975;Dbxref=NCBI_GP:WJG97359.1;Name=WJG97359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=PUW34_01975;product=YaiY family protein;protein_id=WJG97359.1;transl_table=11 CP118122.1 Genbank gene 431315 431530 . + . ID=gene-PUW34_01980;Name=PUW34_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01980 CP118122.1 Protein Homology CDS 431315 431530 . + 0 ID=cds-WJG97360.1;Parent=gene-PUW34_01980;Dbxref=NCBI_GP:WJG97360.1;Name=WJG97360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=PUW34_01980;product=DUF2754 family protein;protein_id=WJG97360.1;transl_table=11 CP118122.1 Genbank gene 431556 432650 . - . ID=gene-PUW34_01985;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=PUW34_01985 CP118122.1 Protein Homology CDS 431556 432650 . - 0 ID=cds-WJG97361.1;Parent=gene-PUW34_01985;Dbxref=NCBI_GP:WJG97361.1;Name=WJG97361.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=PUW34_01985;product=D-alanine--D-alanine ligase;protein_id=WJG97361.1;transl_table=11 CP118122.1 Genbank gene 432728 433441 . + . ID=gene-PUW34_01990;Name=PUW34_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_01990 CP118122.1 Protein Homology CDS 432728 433441 . + 0 ID=cds-WJG97362.1;Parent=gene-PUW34_01990;Dbxref=NCBI_GP:WJG97362.1;Name=WJG97362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=PUW34_01990;product=extensin family protein;protein_id=WJG97362.1;transl_table=11 CP118122.1 Genbank pseudogene 433610 434821 . + . ID=gene-PUW34_01995;Name=PUW34_01995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_01995;pseudo=true CP118122.1 Protein Homology CDS 433610 434821 . + 0 ID=cds-PUW34_01995;Parent=gene-PUW34_01995;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=PUW34_01995;product=multidrug efflux MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 435118 435378 . + . ID=gene-PUW34_02000;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=PUW34_02000 CP118122.1 Protein Homology CDS 435118 435378 . + 0 ID=cds-WJG97363.1;Parent=gene-PUW34_02000;Dbxref=NCBI_GP:WJG97363.1;Name=WJG97363.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=PUW34_02000;product=anti-adapter protein IraP;protein_id=WJG97363.1;transl_table=11 CP118122.1 Genbank gene 435727 436047 . + . ID=gene-PUW34_02005;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=PUW34_02005 CP118122.1 Protein Homology CDS 435727 436047 . + 0 ID=cds-WJG97364.1;Parent=gene-PUW34_02005;Dbxref=NCBI_GP:WJG97364.1;Name=WJG97364.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=PUW34_02005;product=phosphate starvation-inducible protein PsiF;protein_id=WJG97364.1;transl_table=11 CP118122.1 Genbank gene 436139 437251 . + . ID=gene-PUW34_02010;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=PUW34_02010 CP118122.1 Protein Homology CDS 436139 437251 . + 0 ID=cds-WJG97365.1;Parent=gene-PUW34_02010;Dbxref=NCBI_GP:WJG97365.1;Name=WJG97365.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=PUW34_02010;product=diguanylate cyclase AdrA;protein_id=WJG97365.1;transl_table=11 CP118122.1 Genbank gene 437266 438075 . - . ID=gene-PUW34_02015;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=PUW34_02015 CP118122.1 Protein Homology CDS 437266 438075 . - 0 ID=cds-WJG97366.1;Parent=gene-PUW34_02015;Dbxref=NCBI_GP:WJG97366.1;Name=WJG97366.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=PUW34_02015;product=pyrroline-5-carboxylate reductase;protein_id=WJG97366.1;transl_table=11 CP118122.1 Genbank pseudogene 438215 438370 . + . ID=gene-PUW34_02020;Name=PUW34_02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02020;pseudo=true CP118122.1 Protein Homology CDS 438215 438370 . + 0 ID=cds-PUW34_02020;Parent=gene-PUW34_02020;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=PUW34_02020;product=YaiI/YqxD family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 438597 439142 . + . ID=gene-PUW34_02025;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=PUW34_02025 CP118122.1 Protein Homology CDS 438597 439142 . + 0 ID=cds-WJG97367.1;Parent=gene-PUW34_02025;Dbxref=NCBI_GP:WJG97367.1;Name=WJG97367.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=PUW34_02025;product=shikimate kinase AroL;protein_id=WJG97367.1;transl_table=11 CP118122.1 Genbank gene 439169 439360 . + . ID=gene-PUW34_02030;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=PUW34_02030 CP118122.1 Protein Homology CDS 439169 439360 . + 0 ID=cds-WJG97368.1;Parent=gene-PUW34_02030;Dbxref=NCBI_GP:WJG97368.1;Name=WJG97368.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=PUW34_02030;product=protein YaiA;protein_id=WJG97368.1;transl_table=11 CP118122.1 Genbank gene 439611 440288 . + . ID=gene-PUW34_02035;Name=PUW34_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02035 CP118122.1 Protein Homology CDS 439611 440288 . + 0 ID=cds-WJG98897.1;Parent=gene-PUW34_02035;Dbxref=NCBI_GP:WJG98897.1;Name=WJG98897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=PUW34_02035;product=AroM family protein;protein_id=WJG98897.1;transl_table=11 CP118122.1 Genbank gene 440359 440643 . + . ID=gene-PUW34_02040;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=PUW34_02040 CP118122.1 Protein Homology CDS 440359 440643 . + 0 ID=cds-WJG97369.1;Parent=gene-PUW34_02040;Dbxref=NCBI_GP:WJG97369.1;Name=WJG97369.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=PUW34_02040;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WJG97369.1;transl_table=11 CP118122.1 Genbank gene 440681 441592 . - . ID=gene-PUW34_02045;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=PUW34_02045 CP118122.1 Protein Homology CDS 440681 441592 . - 0 ID=cds-WJG97370.1;Parent=gene-PUW34_02045;Dbxref=NCBI_GP:WJG97370.1;Name=WJG97370.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=PUW34_02045;product=recombination-associated protein RdgC;protein_id=WJG97370.1;transl_table=11 CP118122.1 Genbank gene 441718 442626 . + . ID=gene-PUW34_02050;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=PUW34_02050 CP118122.1 Protein Homology CDS 441718 442626 . + 0 ID=cds-WJG97371.1;Parent=gene-PUW34_02050;Dbxref=NCBI_GP:WJG97371.1;Name=WJG97371.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=PUW34_02050;product=fructokinase;protein_id=WJG97371.1;transl_table=11 CP118122.1 Genbank gene 442648 443820 . - . ID=gene-PUW34_02055;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=PUW34_02055 CP118122.1 Protein Homology CDS 442648 443820 . - 0 ID=cds-WJG97372.1;Parent=gene-PUW34_02055;Dbxref=NCBI_GP:WJG97372.1;Name=WJG97372.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=PUW34_02055;product=MFS transporter AraJ;protein_id=WJG97372.1;transl_table=11 CP118122.1 Genbank pseudogene 443993 447132 . - . ID=gene-PUW34_02060;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=pseudogene;locus_tag=PUW34_02060;pseudo=true CP118122.1 Protein Homology CDS 443993 447132 . - 0 ID=cds-PUW34_02060;Parent=gene-PUW34_02060;Note=frameshifted;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=PUW34_02060;product=exonuclease subunit SbcC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 447129 448331 . - . ID=gene-PUW34_02065;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=PUW34_02065 CP118122.1 Protein Homology CDS 447129 448331 . - 0 ID=cds-WJG97373.1;Parent=gene-PUW34_02065;Dbxref=NCBI_GP:WJG97373.1;Name=WJG97373.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=PUW34_02065;product=exonuclease subunit SbcD;protein_id=WJG97373.1;transl_table=11 CP118122.1 Genbank gene 448545 449234 . + . ID=gene-PUW34_02070;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=PUW34_02070 CP118122.1 Protein Homology CDS 448545 449234 . + 0 ID=cds-WJG97374.1;Parent=gene-PUW34_02070;Dbxref=NCBI_GP:WJG97374.1;Name=WJG97374.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=PUW34_02070;product=phosphate response regulator transcription factor PhoB;protein_id=WJG97374.1;transl_table=11 CP118122.1 Genbank gene 449304 450599 . + . ID=gene-PUW34_02075;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=PUW34_02075 CP118122.1 Protein Homology CDS 449304 450599 . + 0 ID=cds-WJG97375.1;Parent=gene-PUW34_02075;Dbxref=NCBI_GP:WJG97375.1;Name=WJG97375.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=PUW34_02075;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WJG97375.1;transl_table=11 CP118122.1 Genbank gene 451008 452327 . + . ID=gene-PUW34_02080;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PUW34_02080 CP118122.1 Protein Homology CDS 451008 452327 . + 0 ID=cds-WJG97376.1;Parent=gene-PUW34_02080;Dbxref=NCBI_GP:WJG97376.1;Name=WJG97376.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=PUW34_02080;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WJG97376.1;transl_table=11 CP118122.1 Genbank gene 452402 453772 . + . ID=gene-PUW34_02085;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=PUW34_02085 CP118122.1 Protein Homology CDS 452402 453772 . + 0 ID=cds-WJG98898.1;Parent=gene-PUW34_02085;Dbxref=NCBI_GP:WJG98898.1;Name=WJG98898.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=PUW34_02085;product=proline-specific permease ProY;protein_id=WJG98898.1;transl_table=11 CP118122.1 Genbank gene 453934 455751 . + . ID=gene-PUW34_02090;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=PUW34_02090 CP118122.1 Protein Homology CDS 453934 455751 . + 0 ID=cds-WJG97377.1;Parent=gene-PUW34_02090;Dbxref=NCBI_GP:WJG97377.1;Name=WJG97377.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=PUW34_02090;product=maltodextrin glucosidase;protein_id=WJG97377.1;transl_table=11 CP118122.1 Genbank gene 455823 456425 . - . ID=gene-PUW34_02095;Name=PUW34_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02095 CP118122.1 Protein Homology CDS 455823 456425 . - 0 ID=cds-WJG97378.1;Parent=gene-PUW34_02095;Dbxref=NCBI_GP:WJG97378.1;Name=WJG97378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=PUW34_02095;product=peroxiredoxin;protein_id=WJG97378.1;transl_table=11 CP118122.1 Genbank gene 456634 457215 . - . ID=gene-PUW34_02100;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=PUW34_02100 CP118122.1 Protein Homology CDS 456634 457215 . - 0 ID=cds-WJG97379.1;Parent=gene-PUW34_02100;Dbxref=NCBI_GP:WJG97379.1;Name=WJG97379.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=PUW34_02100;product=ACP phosphodiesterase;protein_id=WJG97379.1;transl_table=11 CP118122.1 Genbank gene 457309 458373 . + . ID=gene-PUW34_02105;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=PUW34_02105 CP118122.1 Protein Homology CDS 457309 458373 . + 0 ID=cds-WJG97380.1;Parent=gene-PUW34_02105;Dbxref=NCBI_GP:WJG97380.1;Name=WJG97380.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=PUW34_02105;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WJG97380.1;transl_table=11 CP118122.1 Genbank gene 458570 459697 . + . ID=gene-PUW34_02110;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=PUW34_02110 CP118122.1 Protein Homology CDS 458570 459697 . + 0 ID=cds-WJG97381.1;Parent=gene-PUW34_02110;Dbxref=NCBI_GP:WJG97381.1;Name=WJG97381.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=PUW34_02110;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WJG97381.1;transl_table=11 CP118122.1 Genbank gene 459720 460052 . + . ID=gene-PUW34_02115;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=PUW34_02115 CP118122.1 Protein Homology CDS 459720 460052 . + 0 ID=cds-WJG97382.1;Parent=gene-PUW34_02115;Dbxref=NCBI_GP:WJG97382.1;Name=WJG97382.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=PUW34_02115;product=preprotein translocase subunit YajC;protein_id=WJG97382.1;transl_table=11 CP118122.1 Genbank pseudogene 460080 461925 . + . ID=gene-PUW34_02120;Name=secD;gbkey=Gene;gene=secD;gene_biotype=pseudogene;locus_tag=PUW34_02120;pseudo=true CP118122.1 Protein Homology CDS 460080 461925 . + 0 ID=cds-PUW34_02120;Parent=gene-PUW34_02120;Note=frameshifted;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=PUW34_02120;product=protein translocase subunit SecD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 461936 462907 . + . ID=gene-PUW34_02125;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=PUW34_02125 CP118122.1 Protein Homology CDS 461936 462907 . + 0 ID=cds-WJG97383.1;Parent=gene-PUW34_02125;Dbxref=NCBI_GP:WJG97383.1;Name=WJG97383.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=PUW34_02125;product=protein translocase subunit SecF;protein_id=WJG97383.1;transl_table=11 CP118122.1 Genbank gene 463052 463417 . + . ID=gene-PUW34_02130;Name=PUW34_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02130 CP118122.1 Protein Homology CDS 463052 463417 . + 0 ID=cds-WJG97384.1;Parent=gene-PUW34_02130;Dbxref=NCBI_GP:WJG97384.1;Name=WJG97384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=PUW34_02130;product=VOC family protein;protein_id=WJG97384.1;transl_table=11 CP118122.1 Genbank gene 463443 464135 . + . ID=gene-PUW34_02135;Name=PUW34_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02135 CP118122.1 Protein Homology CDS 463443 464135 . + 0 ID=cds-WJG97385.1;Parent=gene-PUW34_02135;Dbxref=NCBI_GP:WJG97385.1;Name=WJG97385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=PUW34_02135;product=YafY family protein;protein_id=WJG97385.1;transl_table=11 CP118122.1 Genbank gene 464305 464652 . + . ID=gene-PUW34_02140;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=PUW34_02140 CP118122.1 Protein Homology CDS 464305 464652 . + 0 ID=cds-WJG97386.1;Parent=gene-PUW34_02140;Dbxref=NCBI_GP:WJG97386.1;Name=WJG97386.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=PUW34_02140;product=HNH nuclease YajD;protein_id=WJG97386.1;transl_table=11 CP118122.1 Genbank gene 465090 465197 . + . ID=gene-PUW34_02145;Name=PUW34_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02145 CP118122.1 Protein Homology CDS 465090 465197 . + 0 ID=cds-WJG97387.1;Parent=gene-PUW34_02145;Dbxref=NCBI_GP:WJG97387.1;Name=WJG97387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=PUW34_02145;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WJG97387.1;transl_table=11 CP118122.1 Genbank gene 465281 466144 . - . ID=gene-PUW34_02150;Name=PUW34_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02150 CP118122.1 Protein Homology CDS 465281 466144 . - 0 ID=cds-WJG97388.1;Parent=gene-PUW34_02150;Dbxref=NCBI_GP:WJG97388.1;Name=WJG97388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=PUW34_02150;product=nucleoside-specific channel-forming protein Tsx;protein_id=WJG97388.1;transl_table=11 CP118122.1 Genbank gene 466444 466983 . - . ID=gene-PUW34_02155;Name=PUW34_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02155 CP118122.1 Protein Homology CDS 466444 466983 . - 0 ID=cds-WJG97389.1;Parent=gene-PUW34_02155;Dbxref=NCBI_GP:WJG97389.1;Name=WJG97389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=PUW34_02155;product=DUF3251 domain-containing protein;protein_id=WJG97389.1;transl_table=11 CP118122.1 Genbank gene 467135 467584 . + . ID=gene-PUW34_02160;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=PUW34_02160 CP118122.1 Protein Homology CDS 467135 467584 . + 0 ID=cds-WJG97390.1;Parent=gene-PUW34_02160;Dbxref=NCBI_GP:WJG97390.1;Name=WJG97390.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=PUW34_02160;product=transcriptional regulator NrdR;protein_id=WJG97390.1;transl_table=11 CP118122.1 Genbank gene 467588 468691 . + . ID=gene-PUW34_02165;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=PUW34_02165 CP118122.1 Protein Homology CDS 467588 468691 . + 0 ID=cds-WJG97391.1;Parent=gene-PUW34_02165;Dbxref=NCBI_GP:WJG97391.1;Name=WJG97391.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=PUW34_02165;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WJG97391.1;transl_table=11 CP118122.1 Genbank gene 468780 469250 . + . ID=gene-PUW34_02170;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PUW34_02170 CP118122.1 Protein Homology CDS 468780 469250 . + 0 ID=cds-WJG97392.1;Parent=gene-PUW34_02170;Dbxref=NCBI_GP:WJG97392.1;Name=WJG97392.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=PUW34_02170;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WJG97392.1;transl_table=11 CP118122.1 Genbank gene 469271 469690 . + . ID=gene-PUW34_02175;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=PUW34_02175 CP118122.1 Protein Homology CDS 469271 469690 . + 0 ID=cds-WJG97393.1;Parent=gene-PUW34_02175;Dbxref=NCBI_GP:WJG97393.1;Name=WJG97393.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=PUW34_02175;product=transcription antitermination factor NusB;protein_id=WJG97393.1;transl_table=11 CP118122.1 Genbank gene 469769 470749 . + . ID=gene-PUW34_02180;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=PUW34_02180 CP118122.1 Protein Homology CDS 469769 470749 . + 0 ID=cds-WJG97394.1;Parent=gene-PUW34_02180;Dbxref=NCBI_GP:WJG97394.1;Name=WJG97394.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=PUW34_02180;product=thiamine-phosphate kinase;protein_id=WJG97394.1;transl_table=11 CP118122.1 Genbank gene 470727 471242 . + . ID=gene-PUW34_02185;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=PUW34_02185 CP118122.1 Protein Homology CDS 470727 471242 . + 0 ID=cds-WJG97395.1;Parent=gene-PUW34_02185;Dbxref=NCBI_GP:WJG97395.1;Name=WJG97395.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=PUW34_02185;product=phosphatidylglycerophosphatase A;protein_id=WJG97395.1;transl_table=11 CP118122.1 Genbank gene 471346 472320 . - . ID=gene-PUW34_02190;Name=PUW34_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02190 CP118122.1 Protein Homology CDS 471346 472320 . - 0 ID=cds-WJG97396.1;Parent=gene-PUW34_02190;Dbxref=NCBI_GP:WJG97396.1;Name=WJG97396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=PUW34_02190;product=aldo/keto reductase;protein_id=WJG97396.1;transl_table=11 CP118122.1 Genbank pseudogene 472377 474238 . - . ID=gene-PUW34_02195;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=pseudogene;locus_tag=PUW34_02195;pseudo=true CP118122.1 Protein Homology CDS 472377 474238 . - 0 ID=cds-PUW34_02195;Parent=gene-PUW34_02195;Note=frameshifted;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=PUW34_02195;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 474262 475161 . - . ID=gene-PUW34_02200;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=PUW34_02200 CP118122.1 Protein Homology CDS 474262 475161 . - 0 ID=cds-WJG97397.1;Parent=gene-PUW34_02200;Dbxref=NCBI_GP:WJG97397.1;Name=WJG97397.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=PUW34_02200;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WJG97397.1;transl_table=11 CP118122.1 Genbank gene 475162 475404 . - . ID=gene-PUW34_02205;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=PUW34_02205 CP118122.1 Protein Homology CDS 475162 475404 . - 0 ID=cds-WJG97398.1;Parent=gene-PUW34_02205;Dbxref=NCBI_GP:WJG97398.1;Name=WJG97398.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=PUW34_02205;product=exodeoxyribonuclease VII small subunit;protein_id=WJG97398.1;transl_table=11 CP118122.1 Genbank gene 475614 477062 . + . ID=gene-PUW34_02210;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=PUW34_02210 CP118122.1 Protein Homology CDS 475614 477062 . + 0 ID=cds-WJG97399.1;Parent=gene-PUW34_02210;Dbxref=NCBI_GP:WJG97399.1;Name=WJG97399.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=PUW34_02210;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WJG97399.1;transl_table=11 CP118122.1 Genbank gene 477106 477903 . - . ID=gene-PUW34_02215;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=PUW34_02215 CP118122.1 Protein Homology CDS 477106 477903 . - 0 ID=cds-WJG97400.1;Parent=gene-PUW34_02215;Dbxref=NCBI_GP:WJG97400.1;Name=WJG97400.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnV;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=PUW34_02215;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WJG97400.1;transl_table=11 CP118122.1 Genbank pseudogene 477897 478765 . - . ID=gene-PUW34_02220;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=pseudogene;locus_tag=PUW34_02220;pseudo=true CP118122.1 Protein Homology CDS 477897 478765 . - 0 ID=cds-PUW34_02220;Parent=gene-PUW34_02220;Note=frameshifted;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnU;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052714.1;locus_tag=PUW34_02220;product=2-aminoethylphosphonate ABC transporter permease subunit;pseudo=true;transl_table=11 CP118122.1 Genbank gene 478768 479877 . - . ID=gene-PUW34_02225;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=PUW34_02225 CP118122.1 Protein Homology CDS 478768 479877 . - 0 ID=cds-WJG97401.1;Parent=gene-PUW34_02225;Dbxref=NCBI_GP:WJG97401.1;Name=WJG97401.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=PUW34_02225;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WJG97401.1;transl_table=11 CP118122.1 Genbank gene 479883 480896 . - . ID=gene-PUW34_02230;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=PUW34_02230 CP118122.1 Protein Homology CDS 479883 480896 . - 0 ID=cds-WJG97402.1;Parent=gene-PUW34_02230;Dbxref=NCBI_GP:WJG97402.1;Name=WJG97402.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=PUW34_02230;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WJG97402.1;transl_table=11 CP118122.1 Genbank gene 481094 481813 . - . ID=gene-PUW34_02235;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=PUW34_02235 CP118122.1 Protein Homology CDS 481094 481813 . - 0 ID=cds-WJG97403.1;Parent=gene-PUW34_02235;Dbxref=NCBI_GP:WJG97403.1;Name=WJG97403.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=PUW34_02235;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WJG97403.1;transl_table=11 CP118122.1 Genbank gene 481953 483056 . + . ID=gene-PUW34_02240;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=PUW34_02240 CP118122.1 Protein Homology CDS 481953 483056 . + 0 ID=cds-WJG97404.1;Parent=gene-PUW34_02240;Dbxref=NCBI_GP:WJG97404.1;Name=WJG97404.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=PUW34_02240;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WJG97404.1;transl_table=11 CP118122.1 Genbank gene 483066 483875 . + . ID=gene-PUW34_02245;Name=PUW34_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02245 CP118122.1 Protein Homology CDS 483066 483875 . + 0 ID=cds-WJG98899.1;Parent=gene-PUW34_02245;Dbxref=NCBI_GP:WJG98899.1;Name=WJG98899.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=PUW34_02245;product=phosphonoacetaldehyde hydrolase;protein_id=WJG98899.1;transl_table=11 CP118122.1 Genbank gene 484018 484608 . - . ID=gene-PUW34_02250;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=PUW34_02250 CP118122.1 Protein Homology CDS 484018 484608 . - 0 ID=cds-WJG97405.1;Parent=gene-PUW34_02250;Dbxref=NCBI_GP:WJG97405.1;Name=WJG97405.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=PUW34_02250;product=protein deglycase YajL;protein_id=WJG97405.1;transl_table=11 CP118122.1 Genbank pseudogene 484571 485481 . - . ID=gene-PUW34_02255;Name=panE;gbkey=Gene;gene=panE;gene_biotype=pseudogene;locus_tag=PUW34_02255;pseudo=true CP118122.1 Protein Homology CDS 484571 485481 . - 0 ID=cds-PUW34_02255;Parent=gene-PUW34_02255;Note=frameshifted;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=PUW34_02255;product=2-dehydropantoate 2-reductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 485607 486098 . + . ID=gene-PUW34_02260;Name=PUW34_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02260 CP118122.1 Protein Homology CDS 485607 486098 . + 0 ID=cds-WJG97406.1;Parent=gene-PUW34_02260;Dbxref=NCBI_GP:WJG97406.1;Name=WJG97406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=PUW34_02260;product=YajQ family cyclic di-GMP-binding protein;protein_id=WJG97406.1;transl_table=11 CP118122.1 Genbank gene 486145 487509 . - . ID=gene-PUW34_02265;Name=PUW34_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02265 CP118122.1 Protein Homology CDS 486145 487509 . - 0 ID=cds-WJG97407.1;Parent=gene-PUW34_02265;Dbxref=NCBI_GP:WJG97407.1;Name=WJG97407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=PUW34_02265;product=MFS transporter;protein_id=WJG97407.1;transl_table=11 CP118122.1 Genbank pseudogene 488034 489544 . + . ID=gene-PUW34_02270;Name=PUW34_02270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02270;pseudo=true CP118122.1 Protein Homology CDS 488034 489544 . + 0 ID=cds-PUW34_02270;Parent=gene-PUW34_02270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=PUW34_02270;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 489556 491049 . + . ID=gene-PUW34_02275;Name=PUW34_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02275 CP118122.1 Protein Homology CDS 489556 491049 . + 0 ID=cds-WJG97408.1;Parent=gene-PUW34_02275;Dbxref=NCBI_GP:WJG97408.1;Name=WJG97408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=PUW34_02275;product=tetratricopeptide repeat protein;protein_id=WJG97408.1;transl_table=11 CP118122.1 Genbank gene 491131 492021 . - . ID=gene-PUW34_02280;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=PUW34_02280 CP118122.1 Protein Homology CDS 491131 492021 . - 0 ID=cds-WJG97409.1;Parent=gene-PUW34_02280;Dbxref=NCBI_GP:WJG97409.1;Name=WJG97409.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=PUW34_02280;product=heme o synthase;protein_id=WJG97409.1;transl_table=11 CP118122.1 Genbank gene 492033 492362 . - . ID=gene-PUW34_02285;Name=PUW34_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02285 CP118122.1 Protein Homology CDS 492033 492362 . - 0 ID=cds-WJG97410.1;Parent=gene-PUW34_02285;Dbxref=NCBI_GP:WJG97410.1;Name=WJG97410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=PUW34_02285;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WJG97410.1;transl_table=11 CP118122.1 Genbank gene 492362 492976 . - . ID=gene-PUW34_02290;Name=PUW34_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02290 CP118122.1 Protein Homology CDS 492362 492976 . - 0 ID=cds-WJG97411.1;Parent=gene-PUW34_02290;Dbxref=NCBI_GP:WJG97411.1;Name=WJG97411.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=PUW34_02290;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WJG97411.1;transl_table=11 CP118122.1 Genbank gene 492966 494957 . - . ID=gene-PUW34_02295;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=PUW34_02295 CP118122.1 Protein Homology CDS 492966 494957 . - 0 ID=cds-WJG97412.1;Parent=gene-PUW34_02295;Dbxref=NCBI_GP:WJG97412.1;Name=WJG97412.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=PUW34_02295;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WJG97412.1;transl_table=11 CP118122.1 Genbank pseudogene 494968 495923 . - . ID=gene-PUW34_02300;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=pseudogene;locus_tag=PUW34_02300;pseudo=true CP118122.1 Protein Homology CDS 494968 495923 . - 0 ID=cds-PUW34_02300;Parent=gene-PUW34_02300;Note=frameshifted;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=PUW34_02300;product=cytochrome o ubiquinol oxidase subunit II;pseudo=true;transl_table=11 CP118122.1 Genbank gene 496375 497850 . - . ID=gene-PUW34_02305;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=PUW34_02305 CP118122.1 Protein Homology CDS 496375 497850 . - 0 ID=cds-WJG97413.1;Parent=gene-PUW34_02305;Dbxref=NCBI_GP:WJG97413.1;Name=WJG97413.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=PUW34_02305;product=muropeptide MFS transporter AmpG;protein_id=WJG97413.1;transl_table=11 CP118122.1 Genbank gene 497894 498472 . - . ID=gene-PUW34_02310;Name=PUW34_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02310 CP118122.1 Protein Homology CDS 497894 498472 . - 0 ID=cds-WJG98900.1;Parent=gene-PUW34_02310;Dbxref=NCBI_GP:WJG98900.1;Name=WJG98900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=PUW34_02310;product=lipoprotein;protein_id=WJG98900.1;transl_table=11 CP118122.1 Genbank gene 498776 499093 . + . ID=gene-PUW34_02315;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=PUW34_02315 CP118122.1 Protein Homology CDS 498776 499093 . + 0 ID=cds-WJG97414.1;Parent=gene-PUW34_02315;Dbxref=NCBI_GP:WJG97414.1;Name=WJG97414.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=PUW34_02315;product=transcriptional regulator BolA;protein_id=WJG97414.1;transl_table=11 CP118122.1 Genbank gene 499440 500738 . + . ID=gene-PUW34_02320;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=PUW34_02320 CP118122.1 Protein Homology CDS 499440 500738 . + 0 ID=cds-WJG97415.1;Parent=gene-PUW34_02320;Dbxref=NCBI_GP:WJG97415.1;Name=WJG97415.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=PUW34_02320;product=trigger factor;protein_id=WJG97415.1;transl_table=11 CP118122.1 Genbank gene 500986 501609 . + . ID=gene-PUW34_02325;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=PUW34_02325 CP118122.1 Protein Homology CDS 500986 501609 . + 0 ID=cds-WJG97416.1;Parent=gene-PUW34_02325;Dbxref=NCBI_GP:WJG97416.1;Name=WJG97416.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=PUW34_02325;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WJG97416.1;transl_table=11 CP118122.1 Genbank gene 501861 503132 . + . ID=gene-PUW34_02330;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=PUW34_02330 CP118122.1 Protein Homology CDS 501861 503132 . + 0 ID=cds-WJG97417.1;Parent=gene-PUW34_02330;Dbxref=NCBI_GP:WJG97417.1;Name=WJG97417.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=PUW34_02330;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WJG97417.1;transl_table=11 CP118122.1 Genbank gene 503318 505672 . + . ID=gene-PUW34_02335;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=PUW34_02335 CP118122.1 Protein Homology CDS 503318 505672 . + 0 ID=cds-WJG97418.1;Parent=gene-PUW34_02335;Dbxref=NCBI_GP:WJG97418.1;Name=WJG97418.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=PUW34_02335;product=endopeptidase La;protein_id=WJG97418.1;transl_table=11 CP118122.1 Genbank gene 505863 506153 . + . ID=gene-PUW34_02340;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=PUW34_02340 CP118122.1 Protein Homology CDS 505863 506153 . + 0 ID=cds-WJG98901.1;Parent=gene-PUW34_02340;Dbxref=NCBI_GP:WJG98901.1;Name=WJG98901.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=PUW34_02340;product=DNA-binding protein HU-beta;protein_id=WJG98901.1;transl_table=11 CP118122.1 Genbank gene 506444 508315 . + . ID=gene-PUW34_02345;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=PUW34_02345 CP118122.1 Protein Homology CDS 506444 508315 . + 0 ID=cds-WJG97419.1;Parent=gene-PUW34_02345;Dbxref=NCBI_GP:WJG97419.1;Name=WJG97419.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=PUW34_02345;product=peptidylprolyl isomerase;protein_id=WJG97419.1;transl_table=11 CP118122.1 Genbank gene 508465 508839 . + . ID=gene-PUW34_02350;Name=PUW34_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02350 CP118122.1 Protein Homology CDS 508465 508839 . + 0 ID=cds-WJG97420.1;Parent=gene-PUW34_02350;Dbxref=NCBI_GP:WJG97420.1;Name=WJG97420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=PUW34_02350;product=helix-hairpin-helix domain-containing protein;protein_id=WJG97420.1;transl_table=11 CP118122.1 Genbank pseudogene 508943 509339 . + . ID=gene-PUW34_02355;Name=PUW34_02355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02355;pseudo=true CP118122.1 Protein Homology CDS 508943 509339 . + 0 ID=cds-PUW34_02355;Parent=gene-PUW34_02355;Note=frameshifted;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=PUW34_02355;product=YbgC/FadM family acyl-CoA thioesterase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 509445 510140 . - . ID=gene-PUW34_02360;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=PUW34_02360 CP118122.1 Protein Homology CDS 509445 510140 . - 0 ID=cds-WJG97421.1;Parent=gene-PUW34_02360;Dbxref=NCBI_GP:WJG97421.1;Name=WJG97421.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=PUW34_02360;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WJG97421.1;transl_table=11 CP118122.1 Genbank gene 510205 511905 . - . ID=gene-PUW34_02365;Name=PUW34_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02365 CP118122.1 Protein Homology CDS 510205 511905 . - 0 ID=cds-WJG97422.1;Parent=gene-PUW34_02365;Dbxref=NCBI_GP:WJG97422.1;Name=WJG97422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=PUW34_02365;product=SgrR family transcriptional regulator;protein_id=WJG97422.1;transl_table=11 CP118122.1 Genbank pseudogene 512006 512823 . + . ID=gene-PUW34_02370;Name=cof;gbkey=Gene;gene=cof;gene_biotype=pseudogene;locus_tag=PUW34_02370;pseudo=true CP118122.1 Protein Homology CDS 512006 512823 . + 0 ID=cds-PUW34_02370;Parent=gene-PUW34_02370;Note=frameshifted;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=PUW34_02370;product=HMP-PP phosphatase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 512873 513928 . - . ID=gene-PUW34_02375;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=PUW34_02375 CP118122.1 Protein Homology CDS 512873 513928 . - 0 ID=cds-WJG97423.1;Parent=gene-PUW34_02375;Dbxref=NCBI_GP:WJG97423.1;Name=WJG97423.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=PUW34_02375;product=cysteine desulfhydrase;protein_id=WJG97423.1;transl_table=11 CP118122.1 Genbank gene 514041 514499 . + . ID=gene-PUW34_02380;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=PUW34_02380 CP118122.1 Protein Homology CDS 514041 514499 . + 0 ID=cds-WJG97424.1;Parent=gene-PUW34_02380;Dbxref=NCBI_GP:WJG97424.1;Name=WJG97424.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=PUW34_02380;product=DNA-binding transcriptional regulator DecR;protein_id=WJG97424.1;transl_table=11 CP118122.1 Genbank gene 514540 516312 . + . ID=gene-PUW34_02385;Name=PUW34_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02385 CP118122.1 Protein Homology CDS 514540 516312 . + 0 ID=cds-WJG97425.1;Parent=gene-PUW34_02385;Dbxref=NCBI_GP:WJG97425.1;Name=WJG97425.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=PUW34_02385;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WJG97425.1;transl_table=11 CP118122.1 Genbank gene 516305 518086 . + . ID=gene-PUW34_02390;Name=PUW34_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02390 CP118122.1 Protein Homology CDS 516305 518086 . + 0 ID=cds-WJG97426.1;Parent=gene-PUW34_02390;Dbxref=NCBI_GP:WJG97426.1;Name=WJG97426.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=PUW34_02390;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WJG97426.1;transl_table=11 CP118122.1 Genbank gene 518299 518637 . + . ID=gene-PUW34_02395;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=PUW34_02395 CP118122.1 Protein Homology CDS 518299 518637 . + 0 ID=cds-WJG97427.1;Parent=gene-PUW34_02395;Dbxref=NCBI_GP:WJG97427.1;Name=WJG97427.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=PUW34_02395;product=P-II family nitrogen regulator;protein_id=WJG97427.1;transl_table=11 CP118122.1 Genbank gene 518669 519955 . + . ID=gene-PUW34_02400;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=PUW34_02400 CP118122.1 Protein Homology CDS 518669 519955 . + 0 ID=cds-WJG97428.1;Parent=gene-PUW34_02400;Dbxref=NCBI_GP:WJG97428.1;Name=WJG97428.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=PUW34_02400;product=ammonium transporter AmtB;protein_id=WJG97428.1;transl_table=11 CP118122.1 Genbank gene 520055 520915 . - . ID=gene-PUW34_02405;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=PUW34_02405 CP118122.1 Protein Homology CDS 520055 520915 . - 0 ID=cds-WJG97429.1;Parent=gene-PUW34_02405;Dbxref=NCBI_GP:WJG97429.1;Name=WJG97429.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=PUW34_02405;product=acyl-CoA thioesterase II;protein_id=WJG97429.1;transl_table=11 CP118122.1 Genbank gene 521130 521699 . + . ID=gene-PUW34_02410;Name=PUW34_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02410 CP118122.1 Protein Homology CDS 521130 521699 . + 0 ID=cds-WJG97430.1;Parent=gene-PUW34_02410;Dbxref=NCBI_GP:WJG97430.1;Name=WJG97430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=PUW34_02410;product=YbaY family lipoprotein;protein_id=WJG97430.1;transl_table=11 CP118122.1 Genbank gene 521732 522121 . - . ID=gene-PUW34_02415;Name=PUW34_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02415 CP118122.1 Protein Homology CDS 521732 522121 . - 0 ID=cds-WJG97431.1;Parent=gene-PUW34_02415;Dbxref=NCBI_GP:WJG97431.1;Name=WJG97431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=PUW34_02415;product=MGMT family protein;protein_id=WJG97431.1;transl_table=11 CP118122.1 Genbank gene 522206 522302 . + . ID=gene-PUW34_02420;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=PUW34_02420 CP118122.1 cmsearch SRP_RNA 522206 522302 . + . ID=rna-PUW34_02420;Parent=gene-PUW34_02420;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_02420;product=signal recognition particle sRNA small type CP118122.1 cmsearch exon 522206 522302 . + . ID=exon-PUW34_02420-1;Parent=rna-PUW34_02420;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_02420;product=signal recognition particle sRNA small type CP118122.1 Genbank gene 522352 523902 . - . ID=gene-PUW34_02425;Name=PUW34_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02425 CP118122.1 Protein Homology CDS 522352 523902 . - 0 ID=cds-WJG97432.1;Parent=gene-PUW34_02425;Dbxref=NCBI_GP:WJG97432.1;Name=WJG97432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=PUW34_02425;product=EAL domain-containing protein;protein_id=WJG97432.1;transl_table=11 CP118122.1 Genbank gene 524127 524387 . + . ID=gene-PUW34_02430;Name=PUW34_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02430 CP118122.1 Protein Homology CDS 524127 524387 . + 0 ID=cds-WJG97433.1;Parent=gene-PUW34_02430;Dbxref=NCBI_GP:WJG97433.1;Name=WJG97433.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=PUW34_02430;product=type B 50S ribosomal protein L31;protein_id=WJG97433.1;transl_table=11 CP118122.1 Genbank pseudogene 524393 524532 . + . ID=gene-PUW34_02435;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=pseudogene;locus_tag=PUW34_02435;pseudo=true CP118122.1 Protein Homology CDS 524393 524532 . + 0 ID=cds-PUW34_02435;Parent=gene-PUW34_02435;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=PUW34_02435;product=type B 50S ribosomal protein L36;pseudo=true;transl_table=11 CP118122.1 Genbank gene 524588 525058 . - . ID=gene-PUW34_02440;Name=PUW34_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02440 CP118122.1 Protein Homology CDS 524588 525058 . - 0 ID=cds-WJG97434.1;Parent=gene-PUW34_02440;Dbxref=NCBI_GP:WJG97434.1;Name=WJG97434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=PUW34_02440;product=YlaC family protein;protein_id=WJG97434.1;transl_table=11 CP118122.1 Genbank gene 525176 525727 . - . ID=gene-PUW34_02445;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=PUW34_02445 CP118122.1 Protein Homology CDS 525176 525727 . - 0 ID=cds-WJG97435.1;Parent=gene-PUW34_02445;Dbxref=NCBI_GP:WJG97435.1;Name=WJG97435.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=PUW34_02445;product=maltose O-acetyltransferase;protein_id=WJG97435.1;transl_table=11 CP118122.1 Genbank gene 525906 526124 . - . ID=gene-PUW34_02450;Name=PUW34_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02450 CP118122.1 Protein Homology CDS 525906 526124 . - 0 ID=cds-WJG97436.1;Parent=gene-PUW34_02450;Dbxref=NCBI_GP:WJG97436.1;Name=WJG97436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=PUW34_02450;product=HHA domain-containing protein;protein_id=WJG97436.1;transl_table=11 CP118122.1 Genbank gene 526152 526526 . - . ID=gene-PUW34_02455;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=PUW34_02455 CP118122.1 Protein Homology CDS 526152 526526 . - 0 ID=cds-WJG97437.1;Parent=gene-PUW34_02455;Dbxref=NCBI_GP:WJG97437.1;Name=WJG97437.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=PUW34_02455;product=Hha toxicity modulator TomB;protein_id=WJG97437.1;transl_table=11 CP118122.1 Genbank gene 527021 530170 . - . ID=gene-PUW34_02460;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=PUW34_02460 CP118122.1 Protein Homology CDS 527021 530170 . - 0 ID=cds-WJG97438.1;Parent=gene-PUW34_02460;Dbxref=NCBI_GP:WJG97438.1;Name=WJG97438.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=PUW34_02460;product=efflux RND transporter permease AcrB;protein_id=WJG97438.1;transl_table=11 CP118122.1 Genbank gene 530193 531386 . - . ID=gene-PUW34_02465;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=PUW34_02465 CP118122.1 Protein Homology CDS 530193 531386 . - 0 ID=cds-WJG97439.1;Parent=gene-PUW34_02465;Dbxref=NCBI_GP:WJG97439.1;Name=WJG97439.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=PUW34_02465;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WJG97439.1;transl_table=11 CP118122.1 Genbank gene 531528 532181 . + . ID=gene-PUW34_02470;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=PUW34_02470 CP118122.1 Protein Homology CDS 531528 532181 . + 0 ID=cds-WJG97440.1;Parent=gene-PUW34_02470;Dbxref=NCBI_GP:WJG97440.1;Name=WJG97440.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=PUW34_02470;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WJG97440.1;transl_table=11 CP118122.1 Genbank gene 532300 535662 . + . ID=gene-PUW34_02475;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=PUW34_02475 CP118122.1 Protein Homology CDS 532300 535662 . + 0 ID=cds-WJG97441.1;Parent=gene-PUW34_02475;Dbxref=NCBI_GP:WJG97441.1;Name=WJG97441.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=PUW34_02475;product=mechanosensitive channel MscK;protein_id=WJG97441.1;transl_table=11 CP118122.1 Genbank gene 535704 536639 . - . ID=gene-PUW34_02480;Name=PUW34_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02480 CP118122.1 Protein Homology CDS 535704 536639 . - 0 ID=cds-WJG97442.1;Parent=gene-PUW34_02480;Dbxref=NCBI_GP:WJG97442.1;Name=WJG97442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=PUW34_02480;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG97442.1;transl_table=11 CP118122.1 Genbank gene 536709 536876 . - . ID=gene-PUW34_02485;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=PUW34_02485 CP118122.1 Protein Homology CDS 536709 536876 . - 0 ID=cds-WJG97443.1;Parent=gene-PUW34_02485;Dbxref=NCBI_GP:WJG97443.1;Name=WJG97443.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=PUW34_02485;product=pleiotropic regulatory protein RsmS;protein_id=WJG97443.1;transl_table=11 CP118122.1 Genbank gene 536890 537417 . - . ID=gene-PUW34_02490;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=PUW34_02490 CP118122.1 Protein Homology CDS 536890 537417 . - 0 ID=cds-WJG97444.1;Parent=gene-PUW34_02490;Dbxref=NCBI_GP:WJG97444.1;Name=WJG97444.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=PUW34_02490;product=primosomal replication protein N'';protein_id=WJG97444.1;transl_table=11 CP118122.1 Genbank gene 537486 537863 . + . ID=gene-PUW34_02495;Name=PUW34_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02495 CP118122.1 Protein Homology CDS 537486 537863 . + 0 ID=cds-WJG97445.1;Parent=gene-PUW34_02495;Dbxref=NCBI_GP:WJG97445.1;Name=WJG97445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=PUW34_02495;product=DUF454 family protein;protein_id=WJG97445.1;transl_table=11 CP118122.1 Genbank gene 538016 538567 . + . ID=gene-PUW34_02500;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=PUW34_02500 CP118122.1 Protein Homology CDS 538016 538567 . + 0 ID=cds-WJG97446.1;Parent=gene-PUW34_02500;Dbxref=NCBI_GP:WJG97446.1;Name=WJG97446.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=PUW34_02500;product=adenine phosphoribosyltransferase;protein_id=WJG97446.1;transl_table=11 CP118122.1 Genbank gene 538681 540609 . + . ID=gene-PUW34_02505;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=PUW34_02505 CP118122.1 Protein Homology CDS 538681 540609 . + 0 ID=cds-WJG97447.1;Parent=gene-PUW34_02505;Dbxref=NCBI_GP:WJG97447.1;Name=WJG97447.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=PUW34_02505;product=DNA polymerase III subunit gamma/tau;protein_id=WJG97447.1;transl_table=11 CP118122.1 cmsearch sequence_feature 539942 540006 . + . ID=id-PUW34_02505;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_02505 CP118122.1 Genbank gene 540653 540982 . + . ID=gene-PUW34_02510;Name=PUW34_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02510 CP118122.1 Protein Homology CDS 540653 540982 . + 0 ID=cds-WJG97448.1;Parent=gene-PUW34_02510;Dbxref=NCBI_GP:WJG97448.1;Name=WJG97448.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=PUW34_02510;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WJG97448.1;transl_table=11 CP118122.1 Genbank gene 540982 541587 . + . ID=gene-PUW34_02515;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=PUW34_02515 CP118122.1 Protein Homology CDS 540982 541587 . + 0 ID=cds-WJG97449.1;Parent=gene-PUW34_02515;Dbxref=NCBI_GP:WJG97449.1;Name=WJG97449.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=PUW34_02515;product=recombination mediator RecR;protein_id=WJG97449.1;transl_table=11 CP118122.1 Genbank gene 541698 543572 . + . ID=gene-PUW34_02520;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=PUW34_02520 CP118122.1 Protein Homology CDS 541698 543572 . + 0 ID=cds-WJG97450.1;Parent=gene-PUW34_02520;Dbxref=NCBI_GP:WJG97450.1;Name=WJG97450.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=PUW34_02520;product=molecular chaperone HtpG;protein_id=WJG97450.1;transl_table=11 CP118122.1 Genbank gene 543930 544574 . + . ID=gene-PUW34_02525;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=PUW34_02525 CP118122.1 Protein Homology CDS 543930 544574 . + 0 ID=cds-WJG97451.1;Parent=gene-PUW34_02525;Dbxref=NCBI_GP:WJG97451.1;Name=WJG97451.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=PUW34_02525;product=adenylate kinase;protein_id=WJG97451.1;transl_table=11 CP118122.1 Genbank gene 544803 545765 . + . ID=gene-PUW34_02530;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=PUW34_02530 CP118122.1 Protein Homology CDS 544803 545765 . + 0 ID=cds-WJG97452.1;Parent=gene-PUW34_02530;Dbxref=NCBI_GP:WJG97452.1;Name=WJG97452.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=PUW34_02530;product=ferrochelatase;protein_id=WJG97452.1;transl_table=11 CP118122.1 Genbank pseudogene 545762 546707 . - . ID=gene-PUW34_02535;Name=aes;gbkey=Gene;gene=aes;gene_biotype=pseudogene;locus_tag=PUW34_02535;pseudo=true CP118122.1 Protein Homology CDS 545762 546707 . - 0 ID=cds-PUW34_02535;Parent=gene-PUW34_02535;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=PUW34_02535;product=acetyl esterase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 546860 548164 . + . ID=gene-PUW34_02540;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=PUW34_02540 CP118122.1 Protein Homology CDS 546860 548164 . + 0 ID=cds-WJG97453.1;Parent=gene-PUW34_02540;Dbxref=NCBI_GP:WJG97453.1;Name=WJG97453.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=PUW34_02540;product=inosine/guanosine kinase;protein_id=WJG97453.1;transl_table=11 CP118122.1 Genbank gene 548213 549889 . - . ID=gene-PUW34_02545;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=PUW34_02545 CP118122.1 Protein Homology CDS 548213 549889 . - 0 ID=cds-WJG97454.1;Parent=gene-PUW34_02545;Dbxref=NCBI_GP:WJG97454.1;Name=WJG97454.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=PUW34_02545;product=YbaL family putative K(+) efflux transporter;protein_id=WJG97454.1;transl_table=11 CP118122.1 Genbank gene 550104 551324 . - . ID=gene-PUW34_02550;Name=PUW34_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02550 CP118122.1 Protein Homology CDS 550104 551324 . - 0 ID=cds-WJG97455.1;Parent=gene-PUW34_02550;Dbxref=NCBI_GP:WJG97455.1;Name=WJG97455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=PUW34_02550;product=MFS transporter;protein_id=WJG97455.1;transl_table=11 CP118122.1 Genbank gene 551497 553149 . + . ID=gene-PUW34_02555;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=PUW34_02555 CP118122.1 Protein Homology CDS 551497 553149 . + 0 ID=cds-WJG97456.1;Parent=gene-PUW34_02555;Dbxref=NCBI_GP:WJG97456.1;Name=WJG97456.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=PUW34_02555;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WJG97456.1;transl_table=11 CP118122.1 Genbank gene 553266 553745 . - . ID=gene-PUW34_02560;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=PUW34_02560 CP118122.1 Protein Homology CDS 553266 553745 . - 0 ID=cds-WJG97457.1;Parent=gene-PUW34_02560;Dbxref=NCBI_GP:WJG97457.1;Name=WJG97457.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=PUW34_02560;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WJG97457.1;transl_table=11 CP118122.1 Genbank gene 553947 554741 . - . ID=gene-PUW34_02565;Name=PUW34_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02565 CP118122.1 Protein Homology CDS 553947 554741 . - 0 ID=cds-WJG97458.1;Parent=gene-PUW34_02565;Dbxref=NCBI_GP:WJG97458.1;Name=WJG97458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=PUW34_02565;product=TraB/GumN family protein;protein_id=WJG97458.1;transl_table=11 CP118122.1 Genbank gene 554827 555654 . - . ID=gene-PUW34_02570;Name=PUW34_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02570 CP118122.1 Protein Homology CDS 554827 555654 . - 0 ID=cds-WJG97459.1;Parent=gene-PUW34_02570;Dbxref=NCBI_GP:WJG97459.1;Name=WJG97459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=PUW34_02570;product=DUF1311 domain-containing protein;protein_id=WJG97459.1;transl_table=11 CP118122.1 Genbank gene 555808 558309 . - . ID=gene-PUW34_02575;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=PUW34_02575 CP118122.1 Protein Homology CDS 555808 558309 . - 0 ID=cds-WJG97460.1;Parent=gene-PUW34_02575;Dbxref=NCBI_GP:WJG97460.1;Name=WJG97460.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=PUW34_02575;product=copper-exporting P-type ATPase CopA;protein_id=WJG97460.1;transl_table=11 CP118122.1 Genbank gene 558419 558835 . + . ID=gene-PUW34_02580;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=PUW34_02580 CP118122.1 Protein Homology CDS 558419 558835 . + 0 ID=cds-WJG97461.1;Parent=gene-PUW34_02580;Dbxref=NCBI_GP:WJG97461.1;Name=WJG97461.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=PUW34_02580;product=Cu(I)-responsive transcriptional regulator;protein_id=WJG97461.1;transl_table=11 CP118122.1 Genbank gene 558836 559288 . - . ID=gene-PUW34_02585;Name=PUW34_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02585 CP118122.1 Protein Homology CDS 558836 559288 . - 0 ID=cds-WJG97462.1;Parent=gene-PUW34_02585;Dbxref=NCBI_GP:WJG97462.1;Name=WJG97462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=PUW34_02585;product=NfeD family protein;protein_id=WJG97462.1;transl_table=11 CP118122.1 Genbank gene 559285 560202 . - . ID=gene-PUW34_02590;Name=PUW34_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02590 CP118122.1 Protein Homology CDS 559285 560202 . - 0 ID=cds-WJG97463.1;Parent=gene-PUW34_02590;Dbxref=NCBI_GP:WJG97463.1;Name=WJG97463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=PUW34_02590;product=SPFH/Band 7/PHB domain protein;protein_id=WJG97463.1;transl_table=11 CP118122.1 Genbank gene 560350 561027 . + . ID=gene-PUW34_02595;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=PUW34_02595 CP118122.1 Protein Homology CDS 560350 561027 . + 0 ID=cds-WJG97464.1;Parent=gene-PUW34_02595;Dbxref=NCBI_GP:WJG97464.1;Name=WJG97464.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=PUW34_02595;product=iron ABC transporter ATP-binding protein FetA;protein_id=WJG97464.1;transl_table=11 CP118122.1 Genbank gene 561014 561793 . + . ID=gene-PUW34_02600;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=PUW34_02600 CP118122.1 Protein Homology CDS 561014 561793 . + 0 ID=cds-WJG97465.1;Parent=gene-PUW34_02600;Dbxref=NCBI_GP:WJG97465.1;Name=WJG97465.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=PUW34_02600;product=iron export ABC transporter permease subunit FetB;protein_id=WJG97465.1;transl_table=11 CP118122.1 Genbank pseudogene 561879 562733 . - . ID=gene-PUW34_02605;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=pseudogene;locus_tag=PUW34_02605;pseudo=true CP118122.1 Protein Homology CDS 561879 562733 . - 0 ID=cds-PUW34_02605;Parent=gene-PUW34_02605;Note=internal stop;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=PUW34_02605;product=chaperedoxin;pseudo=true;transl_table=11 CP118122.1 Genbank gene 562793 563563 . - . ID=gene-PUW34_02610;Name=PUW34_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02610 CP118122.1 Protein Homology CDS 562793 563563 . - 0 ID=cds-WJG97466.1;Parent=gene-PUW34_02610;Dbxref=NCBI_GP:WJG97466.1;Name=WJG97466.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=PUW34_02610;product=SDR family oxidoreductase;protein_id=WJG97466.1;transl_table=11 CP118122.1 Genbank gene 563718 564332 . - . ID=gene-PUW34_02615;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=PUW34_02615 CP118122.1 Protein Homology CDS 563718 564332 . - 0 ID=cds-WJG97467.1;Parent=gene-PUW34_02615;Dbxref=NCBI_GP:WJG97467.1;Name=WJG97467.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=PUW34_02615;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WJG97467.1;transl_table=11 CP118122.1 Genbank gene 564303 564989 . + . ID=gene-PUW34_02620;Name=PUW34_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02620 CP118122.1 Protein Homology CDS 564303 564989 . + 0 ID=cds-WJG97468.1;Parent=gene-PUW34_02620;Dbxref=NCBI_GP:WJG97468.1;Name=WJG97468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=PUW34_02620;product=ABC transporter ATP-binding protein;protein_id=WJG97468.1;transl_table=11 CP118122.1 Genbank pseudogene 564986 567400 . + . ID=gene-PUW34_02625;Name=PUW34_02625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02625;pseudo=true CP118122.1 Protein Homology CDS 564986 567400 . + 0 ID=cds-PUW34_02625;Parent=gene-PUW34_02625;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=PUW34_02625;product=ABC transporter permease;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 567586 568719 . + . ID=gene-PUW34_02630;Name=PUW34_02630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02630;pseudo=true CP118122.1 Protein Homology CDS 567586 568719 . + 0 ID=cds-PUW34_02630;Parent=gene-PUW34_02630;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=PUW34_02630;product=porin;pseudo=true;transl_table=11 CP118122.1 Genbank gene 568976 569806 . + . ID=gene-PUW34_02635;Name=PUW34_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02635 CP118122.1 Protein Homology CDS 568976 569806 . + 0 ID=cds-WJG97469.1;Parent=gene-PUW34_02635;Dbxref=NCBI_GP:WJG97469.1;Name=WJG97469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=PUW34_02635;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WJG97469.1;transl_table=11 CP118122.1 Genbank gene 569843 570859 . + . ID=gene-PUW34_02640;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=PUW34_02640 CP118122.1 Protein Homology CDS 569843 570859 . + 0 ID=cds-WJG97470.1;Parent=gene-PUW34_02640;Dbxref=NCBI_GP:WJG97470.1;Name=WJG97470.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=PUW34_02640;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WJG97470.1;transl_table=11 CP118122.1 Genbank gene 570852 571511 . + . ID=gene-PUW34_02645;Name=PUW34_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02645 CP118122.1 Protein Homology CDS 570852 571511 . + 0 ID=cds-WJG97471.1;Parent=gene-PUW34_02645;Dbxref=NCBI_GP:WJG97471.1;Name=WJG97471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=PUW34_02645;product=ABC transporter permease;protein_id=WJG97471.1;transl_table=11 CP118122.1 Genbank gene 571550 572644 . - . ID=gene-PUW34_02650;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=PUW34_02650 CP118122.1 Protein Homology CDS 571550 572644 . - 0 ID=cds-WJG97472.1;Parent=gene-PUW34_02650;Dbxref=NCBI_GP:WJG97472.1;Name=WJG97472.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=PUW34_02650;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WJG97472.1;transl_table=11 CP118122.1 Genbank pseudogene 572714 573639 . - . ID=gene-PUW34_02655;Name=allS;gbkey=Gene;gene=allS;gene_biotype=pseudogene;locus_tag=PUW34_02655;pseudo=true CP118122.1 Protein Homology CDS 572714 573639 . - 0 ID=cds-PUW34_02655;Parent=gene-PUW34_02655;Note=frameshifted;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=PUW34_02655;product=HTH-type transcriptional activator AllS;pseudo=true;transl_table=11 CP118122.1 Genbank gene 573865 574347 . + . ID=gene-PUW34_02660;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=PUW34_02660 CP118122.1 Protein Homology CDS 573865 574347 . + 0 ID=cds-WJG97473.1;Parent=gene-PUW34_02660;Dbxref=NCBI_GP:WJG97473.1;Name=WJG97473.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764660.1;locus_tag=PUW34_02660;product=ureidoglycolate lyase;protein_id=WJG97473.1;transl_table=11 CP118122.1 Genbank gene 574426 575244 . + . ID=gene-PUW34_02665;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=PUW34_02665 CP118122.1 Protein Homology CDS 574426 575244 . + 0 ID=cds-WJG97474.1;Parent=gene-PUW34_02665;Dbxref=NCBI_GP:WJG97474.1;Name=WJG97474.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=PUW34_02665;product=HTH-type transcriptional repressor AllR;protein_id=WJG97474.1;transl_table=11 CP118122.1 Genbank gene 575329 577110 . + . ID=gene-PUW34_02670;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=PUW34_02670 CP118122.1 Protein Homology CDS 575329 577110 . + 0 ID=cds-WJG97475.1;Parent=gene-PUW34_02670;Dbxref=NCBI_GP:WJG97475.1;Name=WJG97475.1;Ontology_term=GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=PUW34_02670;product=glyoxylate carboligase;protein_id=WJG97475.1;transl_table=11 CP118122.1 Genbank gene 577123 577899 . + . ID=gene-PUW34_02675;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=PUW34_02675 CP118122.1 Protein Homology CDS 577123 577899 . + 0 ID=cds-WJG97476.1;Parent=gene-PUW34_02675;Dbxref=NCBI_GP:WJG97476.1;Name=WJG97476.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=PUW34_02675;product=hydroxypyruvate isomerase;protein_id=WJG97476.1;transl_table=11 CP118122.1 Genbank gene 577999 578877 . + . ID=gene-PUW34_02680;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=PUW34_02680 CP118122.1 Protein Homology CDS 577999 578877 . + 0 ID=cds-WJG97477.1;Parent=gene-PUW34_02680;Dbxref=NCBI_GP:WJG97477.1;Name=WJG97477.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=PUW34_02680;product=2-hydroxy-3-oxopropionate reductase;protein_id=WJG97477.1;transl_table=11 CP118122.1 Genbank gene 578943 580190 . + . ID=gene-PUW34_02685;Name=PUW34_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02685 CP118122.1 Protein Homology CDS 578943 580190 . + 0 ID=cds-WJG97478.1;Parent=gene-PUW34_02685;Dbxref=NCBI_GP:WJG97478.1;Name=WJG97478.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=PUW34_02685;product=MFS transporter;protein_id=WJG97478.1;transl_table=11 CP118122.1 Genbank gene 580286 581740 . + . ID=gene-PUW34_02690;Name=PUW34_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02690 CP118122.1 Protein Homology CDS 580286 581740 . + 0 ID=cds-WJG97479.1;Parent=gene-PUW34_02690;Dbxref=NCBI_GP:WJG97479.1;Name=WJG97479.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=PUW34_02690;product=putative allantoin permease;protein_id=WJG97479.1;transl_table=11 CP118122.1 Genbank gene 581819 583180 . + . ID=gene-PUW34_02695;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=PUW34_02695 CP118122.1 Protein Homology CDS 581819 583180 . + 0 ID=cds-WJG97480.1;Parent=gene-PUW34_02695;Dbxref=NCBI_GP:WJG97480.1;Name=WJG97480.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=PUW34_02695;product=allantoinase AllB;protein_id=WJG97480.1;transl_table=11 CP118122.1 Genbank gene 583239 584537 . + . ID=gene-PUW34_02700;Name=PUW34_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02700 CP118122.1 Protein Homology CDS 583239 584537 . + 0 ID=cds-WJG97481.1;Parent=gene-PUW34_02700;Dbxref=NCBI_GP:WJG97481.1;Name=WJG97481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=PUW34_02700;product=uracil/xanthine transporter;protein_id=WJG97481.1;transl_table=11 CP118122.1 Genbank gene 584560 585708 . + . ID=gene-PUW34_02705;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=PUW34_02705 CP118122.1 Protein Homology CDS 584560 585708 . + 0 ID=cds-WJG98902.1;Parent=gene-PUW34_02705;Dbxref=NCBI_GP:WJG98902.1;Name=WJG98902.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=PUW34_02705;product=glycerate 3-kinase;protein_id=WJG98902.1;transl_table=11 CP118122.1 Genbank gene 585788 586573 . - . ID=gene-PUW34_02710;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=PUW34_02710 CP118122.1 Protein Homology CDS 585788 586573 . - 0 ID=cds-WJG97482.1;Parent=gene-PUW34_02710;Dbxref=NCBI_GP:WJG97482.1;Name=WJG97482.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=PUW34_02710;product=(S)-ureidoglycine aminohydrolase;protein_id=WJG97482.1;transl_table=11 CP118122.1 Genbank gene 586584 587819 . - . ID=gene-PUW34_02715;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=PUW34_02715 CP118122.1 Protein Homology CDS 586584 587819 . - 0 ID=cds-WJG97483.1;Parent=gene-PUW34_02715;Dbxref=NCBI_GP:WJG97483.1;Name=WJG97483.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=PUW34_02715;product=allantoate deiminase;protein_id=WJG97483.1;transl_table=11 CP118122.1 Genbank gene 587841 588890 . - . ID=gene-PUW34_02720;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=PUW34_02720 CP118122.1 Protein Homology CDS 587841 588890 . - 0 ID=cds-WJG97484.1;Parent=gene-PUW34_02720;Dbxref=NCBI_GP:WJG97484.1;Name=WJG97484.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=PUW34_02720;product=ureidoglycolate dehydrogenase;protein_id=WJG97484.1;transl_table=11 CP118122.1 Genbank pseudogene 589206 590870 . + . ID=gene-PUW34_02725;Name=PUW34_02725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02725;pseudo=true CP118122.1 Protein Homology CDS 589206 590870 . + 0 ID=cds-PUW34_02725;Parent=gene-PUW34_02725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=PUW34_02725;product=acyl-CoA synthetase FdrA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 590880 592139 . + . ID=gene-PUW34_02730;Name=PUW34_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02730 CP118122.1 Protein Homology CDS 590880 592139 . + 0 ID=cds-WJG97485.1;Parent=gene-PUW34_02730;Dbxref=NCBI_GP:WJG97485.1;Name=WJG97485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=PUW34_02730;product=DUF1116 domain-containing protein;protein_id=WJG97485.1;transl_table=11 CP118122.1 Genbank pseudogene 592151 592959 . + . ID=gene-PUW34_02735;Name=PUW34_02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02735;pseudo=true CP118122.1 Protein Homology CDS 592151 592959 . + 0 ID=cds-PUW34_02735;Parent=gene-PUW34_02735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=PUW34_02735;product=DUF2877 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 592963 593856 . + . ID=gene-PUW34_02740;Name=PUW34_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02740 CP118122.1 Protein Homology CDS 592963 593856 . + 0 ID=cds-WJG97486.1;Parent=gene-PUW34_02740;Dbxref=NCBI_GP:WJG97486.1;Name=WJG97486.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=PUW34_02740;product=carbamate kinase;protein_id=WJG97486.1;transl_table=11 CP118122.1 Genbank gene 593897 594964 . - . ID=gene-PUW34_02745;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=PUW34_02745 CP118122.1 Protein Homology CDS 593897 594964 . - 0 ID=cds-WJG97487.1;Parent=gene-PUW34_02745;Dbxref=NCBI_GP:WJG97487.1;Name=WJG97487.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=PUW34_02745;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WJG97487.1;transl_table=11 CP118122.1 Genbank gene 594961 595470 . - . ID=gene-PUW34_02750;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=PUW34_02750 CP118122.1 Protein Homology CDS 594961 595470 . - 0 ID=cds-WJG97488.1;Parent=gene-PUW34_02750;Dbxref=NCBI_GP:WJG97488.1;Name=WJG97488.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=PUW34_02750;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WJG97488.1;transl_table=11 CP118122.1 Genbank gene 595588 596310 . - . ID=gene-PUW34_02755;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=PUW34_02755 CP118122.1 Protein Homology CDS 595588 596310 . - 0 ID=cds-WJG97489.1;Parent=gene-PUW34_02755;Dbxref=NCBI_GP:WJG97489.1;Name=WJG97489.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=PUW34_02755;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WJG97489.1;transl_table=11 CP118122.1 Genbank gene 596313 596807 . - . ID=gene-PUW34_02760;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=PUW34_02760 CP118122.1 Protein Homology CDS 596313 596807 . - 0 ID=cds-WJG97490.1;Parent=gene-PUW34_02760;Dbxref=NCBI_GP:WJG97490.1;Name=WJG97490.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=PUW34_02760;product=peptidylprolyl isomerase B;protein_id=WJG97490.1;transl_table=11 CP118122.1 Genbank gene 596980 598365 . + . ID=gene-PUW34_02765;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=PUW34_02765 CP118122.1 Protein Homology CDS 596980 598365 . + 0 ID=cds-WJG97491.1;Parent=gene-PUW34_02765;Dbxref=NCBI_GP:WJG97491.1;Name=WJG97491.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=PUW34_02765;product=cysteine--tRNA ligase;protein_id=WJG97491.1;transl_table=11 CP118122.1 Genbank gene 598409 599233 . - . ID=gene-PUW34_02770;Name=PUW34_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02770 CP118122.1 Protein Homology CDS 598409 599233 . - 0 ID=cds-WJG97492.1;Parent=gene-PUW34_02770;Dbxref=NCBI_GP:WJG97492.1;Name=WJG97492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=PUW34_02770;product=DUF2145 domain-containing protein;protein_id=WJG97492.1;transl_table=11 CP118122.1 Genbank gene 599230 599667 . - . ID=gene-PUW34_02775;Name=PUW34_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02775 CP118122.1 Protein Homology CDS 599230 599667 . - 0 ID=cds-WJG97493.1;Parent=gene-PUW34_02775;Dbxref=NCBI_GP:WJG97493.1;Name=WJG97493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=PUW34_02775;product=STM0539 family protein;protein_id=WJG97493.1;transl_table=11 CP118122.1 Genbank gene 599660 600205 . - . ID=gene-PUW34_02780;Name=PUW34_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02780 CP118122.1 Protein Homology CDS 599660 600205 . - 0 ID=cds-WJG97494.1;Parent=gene-PUW34_02780;Dbxref=NCBI_GP:WJG97494.1;Name=WJG97494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=PUW34_02780;product=metal-dependent hydrolase;protein_id=WJG97494.1;transl_table=11 CP118122.1 Genbank gene 600289 600501 . - . ID=gene-PUW34_02785;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=PUW34_02785 CP118122.1 Protein Homology CDS 600289 600501 . - 0 ID=cds-WJG97495.1;Parent=gene-PUW34_02785;Dbxref=NCBI_GP:WJG97495.1;Name=WJG97495.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=PUW34_02785;product=ribosome-associated protein YbcJ;protein_id=WJG97495.1;transl_table=11 CP118122.1 Genbank gene 600503 601369 . - . ID=gene-PUW34_02790;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=PUW34_02790 CP118122.1 Protein Homology CDS 600503 601369 . - 0 ID=cds-WJG97496.1;Parent=gene-PUW34_02790;Dbxref=NCBI_GP:WJG97496.1;Name=WJG97496.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=PUW34_02790;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WJG97496.1;transl_table=11 CP118122.1 Genbank gene 601915 602472 . + . ID=gene-PUW34_02795;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=PUW34_02795 CP118122.1 Protein Homology CDS 601915 602472 . + 0 ID=cds-WJG97497.1;Parent=gene-PUW34_02795;Dbxref=NCBI_GP:WJG97497.1;Name=WJG97497.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=PUW34_02795;product=type 1 fimbrial protein subunit FimA;protein_id=WJG97497.1;transl_table=11 CP118122.1 Genbank gene 602546 603079 . + . ID=gene-PUW34_02800;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=PUW34_02800 CP118122.1 Protein Homology CDS 602546 603079 . + 0 ID=cds-WJG97498.1;Parent=gene-PUW34_02800;Dbxref=NCBI_GP:WJG97498.1;Name=WJG97498.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=PUW34_02800;product=type 1 fimbrial protein subunit FimI;protein_id=WJG97498.1;transl_table=11 CP118122.1 Genbank gene 603123 603815 . + . ID=gene-PUW34_02805;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=PUW34_02805 CP118122.1 Protein Homology CDS 603123 603815 . + 0 ID=cds-WJG97499.1;Parent=gene-PUW34_02805;Dbxref=NCBI_GP:WJG97499.1;Name=WJG97499.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=PUW34_02805;product=type 1 fimbria chaperone FimC;protein_id=WJG97499.1;transl_table=11 CP118122.1 Genbank pseudogene 603846 606456 . + . ID=gene-PUW34_02810;Name=PUW34_02810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02810;pseudo=true CP118122.1 Protein Homology CDS 603846 606456 . + 0 ID=cds-PUW34_02810;Parent=gene-PUW34_02810;Note=frameshifted;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=PUW34_02810;product=fimbrial biogenesis usher protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 606471 607478 . + . ID=gene-PUW34_02815;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=PUW34_02815 CP118122.1 Protein Homology CDS 606471 607478 . + 0 ID=cds-WJG97500.1;Parent=gene-PUW34_02815;Dbxref=NCBI_GP:WJG97500.1;Name=WJG97500.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=PUW34_02815;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WJG97500.1;transl_table=11 CP118122.1 Genbank gene 607488 608006 . + . ID=gene-PUW34_02820;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=PUW34_02820 CP118122.1 Protein Homology CDS 607488 608006 . + 0 ID=cds-WJG97501.1;Parent=gene-PUW34_02820;Dbxref=NCBI_GP:WJG97501.1;Name=WJG97501.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=PUW34_02820;product=fimbria assembly protein;protein_id=WJG97501.1;transl_table=11 CP118122.1 Genbank gene 608052 608684 . - . ID=gene-PUW34_02825;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=PUW34_02825 CP118122.1 Protein Homology CDS 608052 608684 . - 0 ID=cds-WJG97502.1;Parent=gene-PUW34_02825;Dbxref=NCBI_GP:WJG97502.1;Name=WJG97502.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=PUW34_02825;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WJG97502.1;transl_table=11 CP118122.1 Genbank pseudogene 609288 610006 . - . ID=gene-PUW34_02830;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=pseudogene;locus_tag=PUW34_02830;pseudo=true CP118122.1 Protein Homology CDS 609288 610006 . - 0 ID=cds-PUW34_02830;Parent=gene-PUW34_02830;Note=frameshifted;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=PUW34_02830;product=fimbria biosynthesis regulator FimY;pseudo=true;transl_table=11 CP118122.1 Genbank gene 610025 610336 . - . ID=gene-PUW34_02835;Name=PUW34_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02835 CP118122.1 Protein Homology CDS 610025 610336 . - 0 ID=cds-WJG97503.1;Parent=gene-PUW34_02835;Dbxref=NCBI_GP:WJG97503.1;Name=WJG97503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=PUW34_02835;product=diguanylate cyclase;protein_id=WJG97503.1;transl_table=11 CP118122.1 Genbank gene 610498 611094 . - . ID=gene-PUW34_02840;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=PUW34_02840 CP118122.1 Protein Homology CDS 610498 611094 . - 0 ID=cds-WJG97504.1;Parent=gene-PUW34_02840;Dbxref=NCBI_GP:WJG97504.1;Name=WJG97504.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=PUW34_02840;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WJG97504.1;transl_table=11 CP118122.1 Genbank gene 611349 611425 . + . ID=gene-PUW34_02845;Name=PUW34_02845;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_02845 CP118122.1 tRNAscan-SE tRNA 611349 611425 . + . ID=rna-PUW34_02845;Parent=gene-PUW34_02845;anticodon=(pos:611383..611385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_02845;product=tRNA-Arg CP118122.1 tRNAscan-SE exon 611349 611425 . + . ID=exon-PUW34_02845-1;Parent=rna-PUW34_02845;anticodon=(pos:611383..611385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_02845;product=tRNA-Arg CP118122.1 Genbank pseudogene 611452 611550 . - . ID=gene-PUW34_02850;Name=PUW34_02850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02850;pseudo=true CP118122.1 Protein Homology CDS 611452 611550 . - 0 ID=cds-PUW34_02850;Parent=gene-PUW34_02850;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012599930.1;locus_tag=PUW34_02850;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 611519 611912 . - . ID=gene-PUW34_02855;Name=PUW34_02855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02855;pseudo=true CP118122.1 Protein Homology CDS 611519 611912 . - 0 ID=cds-PUW34_02855;Parent=gene-PUW34_02855;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612139.1;locus_tag=PUW34_02855;product=IS3 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 611933 612186 . - . ID=gene-PUW34_02860;Name=PUW34_02860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02860;pseudo=true CP118122.1 Protein Homology CDS 611933 612186 . - 0 ID=cds-PUW34_02860;Parent=gene-PUW34_02860;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611921.1;locus_tag=PUW34_02860;product=transposase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 612573 614224 . - . ID=gene-PUW34_02865;Name=PUW34_02865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02865;pseudo=true CP118122.1 Protein Homology CDS 612573 614224 . - 0 ID=cds-PUW34_02865;Parent=gene-PUW34_02865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=PUW34_02865;product=DUF6056 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 614205 615131 . - . ID=gene-PUW34_02870;Name=PUW34_02870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02870;pseudo=true CP118122.1 Protein Homology CDS 614205 615131 . - 0 ID=cds-PUW34_02870;Parent=gene-PUW34_02870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=PUW34_02870;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 615128 615490 . - . ID=gene-PUW34_02875;Name=PUW34_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02875 CP118122.1 Protein Homology CDS 615128 615490 . - 0 ID=cds-WJG97505.1;Parent=gene-PUW34_02875;Dbxref=NCBI_GP:WJG97505.1;Name=WJG97505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=PUW34_02875;product=GtrA family protein;protein_id=WJG97505.1;transl_table=11 CP118122.1 Genbank gene 615913 616122 . - . ID=gene-PUW34_02880;Name=PUW34_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02880 CP118122.1 GeneMarkS-2+ CDS 615913 616122 . - 0 ID=cds-WJG97506.1;Parent=gene-PUW34_02880;Dbxref=NCBI_GP:WJG97506.1;Name=WJG97506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_02880;product=hypothetical protein;protein_id=WJG97506.1;transl_table=11 CP118122.1 Genbank pseudogene 616357 616731 . - . ID=gene-PUW34_02885;Name=PUW34_02885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02885;pseudo=true CP118122.1 Protein Homology CDS 616357 616731 . - 0 ID=cds-PUW34_02885;Parent=gene-PUW34_02885;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=PUW34_02885;product=ATP-binding protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 616741 616974 . + . ID=gene-PUW34_02890;Name=PUW34_02890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02890;pseudo=true CP118122.1 Protein Homology CDS 616741 616974 . + 0 ID=cds-PUW34_02890;Parent=gene-PUW34_02890;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436621.1;locus_tag=PUW34_02890;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP118122.1 Genbank gene 617025 617879 . - . ID=gene-PUW34_02895;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=PUW34_02895 CP118122.1 Protein Homology CDS 617025 617879 . - 0 ID=cds-WJG97507.1;Parent=gene-PUW34_02895;Dbxref=NCBI_GP:WJG97507.1;Name=WJG97507.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=PUW34_02895;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WJG97507.1;transl_table=11 CP118122.1 Genbank gene 618095 619420 . + . ID=gene-PUW34_02900;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=PUW34_02900 CP118122.1 Protein Homology CDS 618095 619420 . + 0 ID=cds-WJG97508.1;Parent=gene-PUW34_02900;Dbxref=NCBI_GP:WJG97508.1;Name=WJG97508.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=PUW34_02900;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WJG97508.1;transl_table=11 CP118122.1 Genbank gene 619577 619813 . + . ID=gene-PUW34_02905;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=PUW34_02905 CP118122.1 Protein Homology CDS 619577 619813 . + 0 ID=cds-WJG97509.1;Parent=gene-PUW34_02905;Dbxref=NCBI_GP:WJG97509.1;Name=WJG97509.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=PUW34_02905;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WJG97509.1;transl_table=11 CP118122.1 Genbank gene 619826 620386 . + . ID=gene-PUW34_02910;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=PUW34_02910 CP118122.1 Protein Homology CDS 619826 620386 . + 0 ID=cds-WJG97510.1;Parent=gene-PUW34_02910;Dbxref=NCBI_GP:WJG97510.1;Name=WJG97510.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=PUW34_02910;product=reactive chlorine resistance membrane protein RclC;protein_id=WJG97510.1;transl_table=11 CP118122.1 Genbank gene 620553 621728 . - . ID=gene-PUW34_02915;Name=PUW34_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02915 CP118122.1 Protein Homology CDS 620553 621728 . - 0 ID=cds-WJG97511.1;Parent=gene-PUW34_02915;Dbxref=NCBI_GP:WJG97511.1;Name=WJG97511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=PUW34_02915;product=DnaJ family molecular chaperone;protein_id=WJG97511.1;transl_table=11 CP118122.1 Genbank gene 622054 623448 . + . ID=gene-PUW34_02920;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=PUW34_02920 CP118122.1 Protein Homology CDS 622054 623448 . + 0 ID=cds-WJG97512.1;Parent=gene-PUW34_02920;Dbxref=NCBI_GP:WJG97512.1;Name=WJG97512.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=PUW34_02920;product=phenylalanine transporter;protein_id=WJG97512.1;transl_table=11 CP118122.1 Genbank gene 623490 624737 . - . ID=gene-PUW34_02925;Name=PUW34_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02925 CP118122.1 Protein Homology CDS 623490 624737 . - 0 ID=cds-WJG97513.1;Parent=gene-PUW34_02925;Dbxref=NCBI_GP:WJG97513.1;Name=WJG97513.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=PUW34_02925;product=mechanosensitive ion channel;protein_id=WJG97513.1;transl_table=11 CP118122.1 Genbank gene 625048 627018 . + . ID=gene-PUW34_02930;Name=PUW34_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02930 CP118122.1 Protein Homology CDS 625048 627018 . + 0 ID=cds-WJG97514.1;Parent=gene-PUW34_02930;Dbxref=NCBI_GP:WJG97514.1;Name=WJG97514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=PUW34_02930;product=autotransporter domain-containing protein;protein_id=WJG97514.1;transl_table=11 CP118122.1 Genbank gene 627285 627938 . - . ID=gene-PUW34_02935;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=PUW34_02935 CP118122.1 Protein Homology CDS 627285 627938 . - 0 ID=cds-WJG97515.1;Parent=gene-PUW34_02935;Dbxref=NCBI_GP:WJG97515.1;Name=WJG97515.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=PUW34_02935;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WJG97515.1;transl_table=11 CP118122.1 Genbank gene 628035 628403 . - . ID=gene-PUW34_02940;Name=PUW34_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02940 CP118122.1 Protein Homology CDS 628035 628403 . - 0 ID=cds-WJG97516.1;Parent=gene-PUW34_02940;Dbxref=NCBI_GP:WJG97516.1;Name=WJG97516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=PUW34_02940;product=MmcQ/YjbR family DNA-binding protein;protein_id=WJG97516.1;transl_table=11 CP118122.1 Genbank gene 628403 628984 . - . ID=gene-PUW34_02945;Name=PUW34_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02945 CP118122.1 Protein Homology CDS 628403 628984 . - 0 ID=cds-WJG97517.1;Parent=gene-PUW34_02945;Dbxref=NCBI_GP:WJG97517.1;Name=WJG97517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=PUW34_02945;product=TetR/AcrR family transcriptional regulator;protein_id=WJG97517.1;transl_table=11 CP118122.1 Genbank gene 629273 629614 . + . ID=gene-PUW34_02950;Name=PUW34_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02950 CP118122.1 Protein Homology CDS 629273 629614 . + 0 ID=cds-WJG97518.1;Parent=gene-PUW34_02950;Dbxref=NCBI_GP:WJG97518.1;Name=WJG97518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=PUW34_02950;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WJG97518.1;transl_table=11 CP118122.1 Genbank gene 629620 629868 . - . ID=gene-PUW34_02955;Name=PUW34_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02955 CP118122.1 Protein Homology CDS 629620 629868 . - 0 ID=cds-WJG97519.1;Parent=gene-PUW34_02955;Dbxref=NCBI_GP:WJG97519.1;Name=WJG97519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=PUW34_02955;product=DUF1158 family protein;protein_id=WJG97519.1;transl_table=11 CP118122.1 Genbank gene 629935 631053 . - . ID=gene-PUW34_02960;Name=PUW34_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02960 CP118122.1 Protein Homology CDS 629935 631053 . - 0 ID=cds-WJG97520.1;Parent=gene-PUW34_02960;Dbxref=NCBI_GP:WJG97520.1;Name=WJG97520.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=PUW34_02960;product=YbdK family carboxylate-amine ligase;protein_id=WJG97520.1;transl_table=11 CP118122.1 Genbank gene 631065 631769 . - . ID=gene-PUW34_02965;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=PUW34_02965 CP118122.1 Protein Homology CDS 631065 631769 . - 0 ID=cds-WJG97521.1;Parent=gene-PUW34_02965;Dbxref=NCBI_GP:WJG97521.1;Name=WJG97521.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=PUW34_02965;product=enterobactin synthase subunit EntD;protein_id=WJG97521.1;transl_table=11 CP118122.1 Genbank pseudogene 631815 634069 . - . ID=gene-PUW34_02970;Name=PUW34_02970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_02970;pseudo=true CP118122.1 Protein Homology CDS 631815 634069 . - 0 ID=cds-PUW34_02970;Parent=gene-PUW34_02970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=PUW34_02970;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 CP118122.1 Genbank gene 634256 635470 . + . ID=gene-PUW34_02975;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=PUW34_02975 CP118122.1 Protein Homology CDS 634256 635470 . + 0 ID=cds-WJG97522.1;Parent=gene-PUW34_02975;Dbxref=NCBI_GP:WJG97522.1;Name=WJG97522.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=PUW34_02975;product=enterochelin esterase;protein_id=WJG97522.1;transl_table=11 CP118122.1 Genbank gene 635501 635719 . + . ID=gene-PUW34_02980;Name=PUW34_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_02980 CP118122.1 Protein Homology CDS 635501 635719 . + 0 ID=cds-WJG97523.1;Parent=gene-PUW34_02980;Dbxref=NCBI_GP:WJG97523.1;Name=WJG97523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=PUW34_02980;product=MbtH family protein;protein_id=WJG97523.1;transl_table=11 CP118122.1 Genbank gene 635716 639600 . + . ID=gene-PUW34_02985;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=PUW34_02985 CP118122.1 Protein Homology CDS 635716 639600 . + 0 ID=cds-WJG97524.1;Parent=gene-PUW34_02985;Dbxref=NCBI_GP:WJG97524.1;Name=WJG97524.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=PUW34_02985;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WJG97524.1;transl_table=11 CP118122.1 Genbank gene 639850 640986 . + . ID=gene-PUW34_02990;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=PUW34_02990 CP118122.1 Protein Homology CDS 639850 640986 . + 0 ID=cds-WJG97525.1;Parent=gene-PUW34_02990;Dbxref=NCBI_GP:WJG97525.1;Name=WJG97525.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=PUW34_02990;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WJG97525.1;transl_table=11 CP118122.1 Genbank gene 641039 641833 . - . ID=gene-PUW34_02995;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=PUW34_02995 CP118122.1 Protein Homology CDS 641039 641833 . - 0 ID=cds-WJG97526.1;Parent=gene-PUW34_02995;Dbxref=NCBI_GP:WJG97526.1;Name=WJG97526.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=PUW34_02995;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WJG97526.1;transl_table=11 CP118122.1 Genbank gene 641830 642819 . - . ID=gene-PUW34_03000;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=PUW34_03000 CP118122.1 Protein Homology CDS 641830 642819 . - 0 ID=cds-WJG98903.1;Parent=gene-PUW34_03000;Dbxref=NCBI_GP:WJG98903.1;Name=WJG98903.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=PUW34_03000;product=iron-enterobactin ABC transporter permease;protein_id=WJG98903.1;transl_table=11 CP118122.1 Genbank gene 642819 643826 . - . ID=gene-PUW34_03005;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=PUW34_03005 CP118122.1 Protein Homology CDS 642819 643826 . - 0 ID=cds-WJG97527.1;Parent=gene-PUW34_03005;Dbxref=NCBI_GP:WJG97527.1;Name=WJG97527.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=PUW34_03005;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WJG97527.1;transl_table=11 CP118122.1 Genbank pseudogene 643937 645180 . + . ID=gene-PUW34_03010;Name=entS;gbkey=Gene;gene=entS;gene_biotype=pseudogene;locus_tag=PUW34_03010;pseudo=true CP118122.1 Protein Homology CDS 643937 645180 . + 0 ID=cds-PUW34_03010;Parent=gene-PUW34_03010;Note=frameshifted;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=PUW34_03010;product=enterobactin transporter EntS;pseudo=true;transl_table=11 CP118122.1 Genbank gene 645243 646199 . - . ID=gene-PUW34_03015;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=PUW34_03015 CP118122.1 Protein Homology CDS 645243 646199 . - 0 ID=cds-WJG97528.1;Parent=gene-PUW34_03015;Dbxref=NCBI_GP:WJG97528.1;Name=WJG97528.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=PUW34_03015;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WJG97528.1;transl_table=11 CP118122.1 Genbank gene 646508 647683 . + . ID=gene-PUW34_03020;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=PUW34_03020 CP118122.1 Protein Homology CDS 646508 647683 . + 0 ID=cds-WJG97529.1;Parent=gene-PUW34_03020;Dbxref=NCBI_GP:WJG97529.1;Name=WJG97529.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=PUW34_03020;product=isochorismate synthase EntC;protein_id=WJG97529.1;transl_table=11 CP118122.1 Genbank gene 647693 649276 . + . ID=gene-PUW34_03025;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=PUW34_03025 CP118122.1 Protein Homology CDS 647693 649276 . + 0 ID=cds-WJG98904.1;Parent=gene-PUW34_03025;Dbxref=NCBI_GP:WJG98904.1;Name=WJG98904.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222466.1;locus_tag=PUW34_03025;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WJG98904.1;transl_table=11 CP118122.1 Genbank gene 649317 650174 . + . ID=gene-PUW34_03030;Name=PUW34_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03030 CP118122.1 Protein Homology CDS 649317 650174 . + 0 ID=cds-WJG97530.1;Parent=gene-PUW34_03030;Dbxref=NCBI_GP:WJG97530.1;Name=WJG97530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=PUW34_03030;product=isochorismatase;protein_id=WJG97530.1;transl_table=11 CP118122.1 Genbank gene 650174 650929 . + . ID=gene-PUW34_03035;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=PUW34_03035 CP118122.1 Protein Homology CDS 650174 650929 . + 0 ID=cds-WJG97531.1;Parent=gene-PUW34_03035;Dbxref=NCBI_GP:WJG97531.1;Name=WJG97531.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=PUW34_03035;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WJG97531.1;transl_table=11 CP118122.1 Genbank gene 650932 651345 . + . ID=gene-PUW34_03040;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=PUW34_03040 CP118122.1 Protein Homology CDS 650932 651345 . + 0 ID=cds-WJG97532.1;Parent=gene-PUW34_03040;Dbxref=NCBI_GP:WJG97532.1;Name=WJG97532.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=PUW34_03040;product=proofreading thioesterase EntH;protein_id=WJG97532.1;transl_table=11 CP118122.1 Genbank gene 651527 653632 . + . ID=gene-PUW34_03045;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=PUW34_03045 CP118122.1 Protein Homology CDS 651527 653632 . + 0 ID=cds-WJG97533.1;Parent=gene-PUW34_03045;Dbxref=NCBI_GP:WJG97533.1;Name=WJG97533.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=PUW34_03045;product=pyruvate/proton symporter CstA;protein_id=WJG97533.1;transl_table=11 CP118122.1 Genbank gene 653696 653893 . + . ID=gene-PUW34_03050;Name=PUW34_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03050 CP118122.1 Protein Homology CDS 653696 653893 . + 0 ID=cds-WJG97534.1;Parent=gene-PUW34_03050;Dbxref=NCBI_GP:WJG97534.1;Name=WJG97534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=PUW34_03050;product=YbdD/YjiX family protein;protein_id=WJG97534.1;transl_table=11 CP118122.1 Genbank gene 653929 655017 . - . ID=gene-PUW34_03055;Name=PUW34_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03055 CP118122.1 Protein Homology CDS 653929 655017 . - 0 ID=cds-WJG97535.1;Parent=gene-PUW34_03055;Dbxref=NCBI_GP:WJG97535.1;Name=WJG97535.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=PUW34_03055;product=oxidoreductase;protein_id=WJG97535.1;transl_table=11 CP118122.1 Genbank gene 655144 656304 . + . ID=gene-PUW34_03060;Name=PUW34_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03060 CP118122.1 Protein Homology CDS 655144 656304 . + 0 ID=cds-WJG97536.1;Parent=gene-PUW34_03060;Dbxref=NCBI_GP:WJG97536.1;Name=WJG97536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=PUW34_03060;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WJG97536.1;transl_table=11 CP118122.1 Genbank gene 656305 656922 . - . ID=gene-PUW34_03065;Name=PUW34_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03065 CP118122.1 Protein Homology CDS 656305 656922 . - 0 ID=cds-WJG97537.1;Parent=gene-PUW34_03065;Dbxref=NCBI_GP:WJG97537.1;Name=WJG97537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=PUW34_03065;product=ParB/RepB/Spo0J family partition protein;protein_id=WJG97537.1;transl_table=11 CP118122.1 Genbank gene 656895 658130 . - . ID=gene-PUW34_03070;Name=PUW34_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03070 CP118122.1 Protein Homology CDS 656895 658130 . - 0 ID=cds-WJG97538.1;Parent=gene-PUW34_03070;Dbxref=NCBI_GP:WJG97538.1;Name=WJG97538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=PUW34_03070;product=phosphoadenosine phosphosulfate reductase;protein_id=WJG97538.1;transl_table=11 CP118122.1 Genbank gene 658296 659198 . - . ID=gene-PUW34_03075;Name=PUW34_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03075 CP118122.1 Protein Homology CDS 658296 659198 . - 0 ID=cds-WJG97539.1;Parent=gene-PUW34_03075;Dbxref=NCBI_GP:WJG97539.1;Name=WJG97539.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=PUW34_03075;product=LysR family transcriptional regulator;protein_id=WJG97539.1;transl_table=11 CP118122.1 Genbank gene 659515 660261 . - . ID=gene-PUW34_03080;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=PUW34_03080 CP118122.1 Protein Homology CDS 659515 660261 . - 0 ID=cds-WJG97540.1;Parent=gene-PUW34_03080;Dbxref=NCBI_GP:WJG97540.1;Name=WJG97540.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=PUW34_03080;product=thiol:disulfide interchange protein DsbG;protein_id=WJG97540.1;transl_table=11 CP118122.1 Genbank gene 660702 661265 . + . ID=gene-PUW34_03085;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=PUW34_03085 CP118122.1 Protein Homology CDS 660702 661265 . + 0 ID=cds-WJG97541.1;Parent=gene-PUW34_03085;Dbxref=NCBI_GP:WJG97541.1;Name=WJG97541.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=PUW34_03085;product=alkyl hydroperoxide reductase subunit C;protein_id=WJG97541.1;transl_table=11 CP118122.1 Genbank gene 661507 663072 . + . ID=gene-PUW34_03090;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=PUW34_03090 CP118122.1 Protein Homology CDS 661507 663072 . + 0 ID=cds-WJG97542.1;Parent=gene-PUW34_03090;Dbxref=NCBI_GP:WJG97542.1;Name=WJG97542.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=PUW34_03090;product=alkyl hydroperoxide reductase subunit F;protein_id=WJG97542.1;transl_table=11 CP118122.1 Genbank gene 663405 663965 . + . ID=gene-PUW34_03095;Name=PUW34_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03095 CP118122.1 Protein Homology CDS 663405 663965 . + 0 ID=cds-WJG97543.1;Parent=gene-PUW34_03095;Dbxref=NCBI_GP:WJG97543.1;Name=WJG97543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=PUW34_03095;product=molecular chaperone;protein_id=WJG97543.1;transl_table=11 CP118122.1 Genbank gene 663958 666237 . + . ID=gene-PUW34_03100;Name=PUW34_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03100 CP118122.1 Protein Homology CDS 663958 666237 . + 0 ID=cds-WJG97544.1;Parent=gene-PUW34_03100;Dbxref=NCBI_GP:WJG97544.1;Name=WJG97544.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=PUW34_03100;product=molybdopterin-dependent oxidoreductase;protein_id=WJG97544.1;transl_table=11 CP118122.1 Genbank gene 666234 666791 . + . ID=gene-PUW34_03105;Name=PUW34_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03105 CP118122.1 Protein Homology CDS 666234 666791 . + 0 ID=cds-WJG97545.1;Parent=gene-PUW34_03105;Dbxref=NCBI_GP:WJG97545.1;Name=WJG97545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=PUW34_03105;product=4Fe-4S dicluster domain-containing protein;protein_id=WJG97545.1;transl_table=11 CP118122.1 Genbank gene 666791 667558 . + . ID=gene-PUW34_03110;Name=PUW34_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03110 CP118122.1 Protein Homology CDS 666791 667558 . + 0 ID=cds-WJG97546.1;Parent=gene-PUW34_03110;Dbxref=NCBI_GP:WJG97546.1;Name=WJG97546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=PUW34_03110;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WJG97546.1;transl_table=11 CP118122.1 Genbank gene 667626 668054 . - . ID=gene-PUW34_03115;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=PUW34_03115 CP118122.1 Protein Homology CDS 667626 668054 . - 0 ID=cds-WJG97547.1;Parent=gene-PUW34_03115;Dbxref=NCBI_GP:WJG97547.1;Name=WJG97547.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=PUW34_03115;product=universal stress protein UspG;protein_id=WJG97547.1;transl_table=11 CP118122.1 Genbank gene 668277 669524 . + . ID=gene-PUW34_03120;Name=PUW34_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03120 CP118122.1 Protein Homology CDS 668277 669524 . + 0 ID=cds-WJG97548.1;Parent=gene-PUW34_03120;Dbxref=NCBI_GP:WJG97548.1;Name=WJG97548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=PUW34_03120;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WJG97548.1;transl_table=11 CP118122.1 Genbank gene 669607 670017 . - . ID=gene-PUW34_03125;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=PUW34_03125 CP118122.1 Protein Homology CDS 669607 670017 . - 0 ID=cds-WJG97549.1;Parent=gene-PUW34_03125;Dbxref=NCBI_GP:WJG97549.1;Name=WJG97549.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=PUW34_03125;product=nucleoside diphosphate kinase regulator;protein_id=WJG97549.1;transl_table=11 CP118122.1 Genbank gene 670252 671058 . - . ID=gene-PUW34_03130;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=PUW34_03130 CP118122.1 Protein Homology CDS 670252 671058 . - 0 ID=cds-WJG97550.1;Parent=gene-PUW34_03130;Dbxref=NCBI_GP:WJG97550.1;Name=WJG97550.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=PUW34_03130;product=ribonuclease I;protein_id=WJG97550.1;transl_table=11 CP118122.1 Genbank gene 671168 672631 . - . ID=gene-PUW34_03135;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=PUW34_03135 CP118122.1 Protein Homology CDS 671168 672631 . - 0 ID=cds-WJG97551.1;Parent=gene-PUW34_03135;Dbxref=NCBI_GP:WJG97551.1;Name=WJG97551.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=PUW34_03135;product=citrate/succinate antiporter CitT;protein_id=WJG97551.1;transl_table=11 CP118122.1 Genbank gene 672690 673565 . - . ID=gene-PUW34_03140;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PUW34_03140 CP118122.1 Protein Homology CDS 672690 673565 . - 0 ID=cds-WJG97552.1;Parent=gene-PUW34_03140;Dbxref=NCBI_GP:WJG97552.1;Name=WJG97552.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=PUW34_03140;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WJG97552.1;transl_table=11 CP118122.1 Genbank gene 673537 674088 . - . ID=gene-PUW34_03145;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PUW34_03145 CP118122.1 Protein Homology CDS 673537 674088 . - 0 ID=cds-WJG97553.1;Parent=gene-PUW34_03145;Dbxref=NCBI_GP:WJG97553.1;Name=WJG97553.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=PUW34_03145;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WJG97553.1;transl_table=11 CP118122.1 Genbank gene 674092 675621 . - . ID=gene-PUW34_03150;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PUW34_03150 CP118122.1 Protein Homology CDS 674092 675621 . - 0 ID=cds-WJG97554.1;Parent=gene-PUW34_03150;Dbxref=NCBI_GP:WJG97554.1;Name=WJG97554.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=PUW34_03150;product=citrate lyase subunit alpha;protein_id=WJG97554.1;transl_table=11 CP118122.1 Genbank gene 675631 676539 . - . ID=gene-PUW34_03155;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PUW34_03155 CP118122.1 Protein Homology CDS 675631 676539 . - 0 ID=cds-WJG97555.1;Parent=gene-PUW34_03155;Dbxref=NCBI_GP:WJG97555.1;Name=WJG97555.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=PUW34_03155;product=citrate (pro-3S)-lyase subunit beta;protein_id=WJG97555.1;transl_table=11 CP118122.1 Genbank gene 676536 676832 . - . ID=gene-PUW34_03160;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PUW34_03160 CP118122.1 Protein Homology CDS 676536 676832 . - 0 ID=cds-WJG97556.1;Parent=gene-PUW34_03160;Dbxref=NCBI_GP:WJG97556.1;Name=WJG97556.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=PUW34_03160;product=citrate lyase acyl carrier protein;protein_id=WJG97556.1;transl_table=11 CP118122.1 Genbank gene 676829 677905 . - . ID=gene-PUW34_03165;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PUW34_03165 CP118122.1 Protein Homology CDS 676829 677905 . - 0 ID=cds-WJG97557.1;Parent=gene-PUW34_03165;Dbxref=NCBI_GP:WJG97557.1;Name=WJG97557.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=PUW34_03165;product=[citrate (pro-3S)-lyase] ligase;protein_id=WJG97557.1;transl_table=11 CP118122.1 Genbank pseudogene 678290 679949 . + . ID=gene-PUW34_03170;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=pseudogene;locus_tag=PUW34_03170;pseudo=true CP118122.1 Protein Homology CDS 678290 679949 . + 0 ID=cds-PUW34_03170;Parent=gene-PUW34_03170;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=PUW34_03170;product=sensor histidine kinase DpiB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 679918 680598 . + . ID=gene-PUW34_03175;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=PUW34_03175 CP118122.1 Protein Homology CDS 679918 680598 . + 0 ID=cds-WJG97558.1;Parent=gene-PUW34_03175;Dbxref=NCBI_GP:WJG97558.1;Name=WJG97558.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=PUW34_03175;product=two-component response regulator DpiA;protein_id=WJG97558.1;transl_table=11 CP118122.1 Genbank gene 680652 682037 . - . ID=gene-PUW34_03180;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=PUW34_03180 CP118122.1 Protein Homology CDS 680652 682037 . - 0 ID=cds-WJG97559.1;Parent=gene-PUW34_03180;Dbxref=NCBI_GP:WJG97559.1;Name=WJG97559.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=PUW34_03180;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WJG97559.1;transl_table=11 CP118122.1 Genbank gene 682416 682988 . + . ID=gene-PUW34_03185;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=PUW34_03185 CP118122.1 Protein Homology CDS 682416 682988 . + 0 ID=cds-WJG98905.1;Parent=gene-PUW34_03185;Dbxref=NCBI_GP:WJG98905.1;Name=WJG98905.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=PUW34_03185;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WJG98905.1;transl_table=11 CP118122.1 Genbank gene 683176 683385 . + . ID=gene-PUW34_03190;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PUW34_03190 CP118122.1 Protein Homology CDS 683176 683385 . + 0 ID=cds-WJG97560.1;Parent=gene-PUW34_03190;Dbxref=NCBI_GP:WJG97560.1;Name=WJG97560.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=PUW34_03190;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WJG97560.1;transl_table=11 CP118122.1 Genbank gene 683443 683826 . - . ID=gene-PUW34_03195;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=PUW34_03195 CP118122.1 Protein Homology CDS 683443 683826 . - 0 ID=cds-WJG97561.1;Parent=gene-PUW34_03195;Dbxref=NCBI_GP:WJG97561.1;Name=WJG97561.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=PUW34_03195;product=fluoride efflux transporter CrcB;protein_id=WJG97561.1;transl_table=11 CP118122.1 Genbank gene 683917 684705 . + . ID=gene-PUW34_03200;Name=PUW34_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03200 CP118122.1 Protein Homology CDS 683917 684705 . + 0 ID=cds-WJG97562.1;Parent=gene-PUW34_03200;Dbxref=NCBI_GP:WJG97562.1;Name=WJG97562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=PUW34_03200;product=deaminated glutathione amidase;protein_id=WJG97562.1;transl_table=11 CP118122.1 Genbank gene 684834 685037 . + . ID=gene-PUW34_03205;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=PUW34_03205 CP118122.1 Protein Homology CDS 684834 685037 . + 0 ID=cds-WJG97563.1;Parent=gene-PUW34_03205;Dbxref=NCBI_GP:WJG97563.1;Name=WJG97563.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=PUW34_03205;product=twin-arginine translocase subunit TatE;protein_id=WJG97563.1;transl_table=11 CP118122.1 Genbank gene 685122 686087 . - . ID=gene-PUW34_03210;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=PUW34_03210 CP118122.1 Protein Homology CDS 685122 686087 . - 0 ID=cds-WJG97564.1;Parent=gene-PUW34_03210;Dbxref=NCBI_GP:WJG97564.1;Name=WJG97564.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=PUW34_03210;product=lipoyl synthase;protein_id=WJG97564.1;transl_table=11 CP118122.1 Genbank gene 686293 687246 . - . ID=gene-PUW34_03215;Name=PUW34_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03215 CP118122.1 Protein Homology CDS 686293 687246 . - 0 ID=cds-WJG97565.1;Parent=gene-PUW34_03215;Dbxref=NCBI_GP:WJG97565.1;Name=WJG97565.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=PUW34_03215;product=YbeF family transcriptional regulator;protein_id=WJG97565.1;transl_table=11 CP118122.1 Genbank gene 687548 688189 . - . ID=gene-PUW34_03220;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=PUW34_03220 CP118122.1 Protein Homology CDS 687548 688189 . - 0 ID=cds-WJG97566.1;Parent=gene-PUW34_03220;Dbxref=NCBI_GP:WJG97566.1;Name=WJG97566.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=PUW34_03220;product=lipoyl(octanoyl) transferase LipB;protein_id=WJG97566.1;transl_table=11 CP118122.1 Genbank gene 688289 688552 . - . ID=gene-PUW34_03225;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=PUW34_03225 CP118122.1 Protein Homology CDS 688289 688552 . - 0 ID=cds-WJG97567.1;Parent=gene-PUW34_03225;Dbxref=NCBI_GP:WJG97567.1;Name=WJG97567.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=PUW34_03225;product=DUF493 family protein YbeD;protein_id=WJG97567.1;transl_table=11 CP118122.1 Genbank pseudogene 688659 689869 . - . ID=gene-PUW34_03230;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=pseudogene;locus_tag=PUW34_03230;pseudo=true CP118122.1 Protein Homology CDS 688659 689869 . - 0 ID=cds-PUW34_03230;Parent=gene-PUW34_03230;Note=frameshifted;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=PUW34_03230;product=D-alanyl-D-alanine carboxypeptidase DacA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 690009 691142 . - . ID=gene-PUW34_03235;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=PUW34_03235 CP118122.1 Protein Homology CDS 690009 691142 . - 0 ID=cds-WJG97568.1;Parent=gene-PUW34_03235;Dbxref=NCBI_GP:WJG97568.1;Name=WJG97568.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=PUW34_03235;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WJG97568.1;transl_table=11 CP118122.1 Genbank gene 691153 692265 . - . ID=gene-PUW34_03240;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=PUW34_03240 CP118122.1 Protein Homology CDS 691153 692265 . - 0 ID=cds-WJG97569.1;Parent=gene-PUW34_03240;Dbxref=NCBI_GP:WJG97569.1;Name=WJG97569.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=PUW34_03240;product=peptidoglycan glycosyltransferase MrdB;protein_id=WJG97569.1;transl_table=11 CP118122.1 Genbank gene 692268 694169 . - . ID=gene-PUW34_03245;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=PUW34_03245 CP118122.1 Protein Homology CDS 692268 694169 . - 0 ID=cds-WJG97570.1;Parent=gene-PUW34_03245;Dbxref=NCBI_GP:WJG97570.1;Name=WJG97570.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=PUW34_03245;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WJG97570.1;transl_table=11 CP118122.1 Genbank gene 694200 694667 . - . ID=gene-PUW34_03250;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=PUW34_03250 CP118122.1 Protein Homology CDS 694200 694667 . - 0 ID=cds-WJG97571.1;Parent=gene-PUW34_03250;Dbxref=NCBI_GP:WJG97571.1;Name=WJG97571.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=PUW34_03250;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WJG97571.1;transl_table=11 CP118122.1 Genbank gene 694671 694988 . - . ID=gene-PUW34_03255;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=PUW34_03255 CP118122.1 Protein Homology CDS 694671 694988 . - 0 ID=cds-WJG97572.1;Parent=gene-PUW34_03255;Dbxref=NCBI_GP:WJG97572.1;Name=WJG97572.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=PUW34_03255;product=ribosome silencing factor;protein_id=WJG97572.1;transl_table=11 CP118122.1 Genbank gene 695317 695925 . - . ID=gene-PUW34_03260;Name=PUW34_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03260 CP118122.1 Protein Homology CDS 695317 695925 . - 0 ID=cds-WJG97573.1;Parent=gene-PUW34_03260;Dbxref=NCBI_GP:WJG97573.1;Name=WJG97573.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=PUW34_03260;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WJG97573.1;transl_table=11 CP118122.1 Genbank pseudogene 696022 697116 . + . ID=gene-PUW34_03265;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=pseudogene;locus_tag=PUW34_03265;pseudo=true CP118122.1 Protein Homology CDS 696022 697116 . + 0 ID=cds-PUW34_03265;Parent=gene-PUW34_03265;Note=internal stop;Ontology_term=GO:0009236,GO:0048472,GO:0005737;gbkey=CDS;gene=cobD;go_component=cytoplasm|0005737||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=PUW34_03265;product=threonine-phosphate decarboxylase CobD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 697091 697732 . - . ID=gene-PUW34_03270;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=PUW34_03270 CP118122.1 Protein Homology CDS 697091 697732 . - 0 ID=cds-WJG97574.1;Parent=gene-PUW34_03270;Dbxref=NCBI_GP:WJG97574.1;Name=WJG97574.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=PUW34_03270;product=nicotinate-nucleotide adenylyltransferase;protein_id=WJG97574.1;transl_table=11 CP118122.1 Genbank gene 697734 698765 . - . ID=gene-PUW34_03275;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=PUW34_03275 CP118122.1 Protein Homology CDS 697734 698765 . - 0 ID=cds-WJG97575.1;Parent=gene-PUW34_03275;Dbxref=NCBI_GP:WJG97575.1;Name=WJG97575.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=PUW34_03275;product=DNA polymerase III subunit delta;protein_id=WJG97575.1;transl_table=11 CP118122.1 Genbank gene 698765 699355 . - . ID=gene-PUW34_03280;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=PUW34_03280 CP118122.1 Protein Homology CDS 698765 699355 . - 0 ID=cds-WJG97576.1;Parent=gene-PUW34_03280;Dbxref=NCBI_GP:WJG97576.1;Name=WJG97576.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=PUW34_03280;product=LPS assembly lipoprotein LptE;protein_id=WJG97576.1;transl_table=11 CP118122.1 Genbank gene 699370 701952 . - . ID=gene-PUW34_03285;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=PUW34_03285 CP118122.1 Protein Homology CDS 699370 701952 . - 0 ID=cds-WJG97577.1;Parent=gene-PUW34_03285;Dbxref=NCBI_GP:WJG97577.1;Name=WJG97577.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=PUW34_03285;product=leucine--tRNA ligase;protein_id=WJG97577.1;transl_table=11 CP118122.1 Genbank pseudogene 702189 702529 . + . ID=gene-PUW34_03290;Name=PUW34_03290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_03290;pseudo=true CP118122.1 Protein Homology CDS 702189 702529 . + 0 ID=cds-PUW34_03290;Parent=gene-PUW34_03290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=PUW34_03290;product=UxaA family hydrolase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 702546 703718 . + . ID=gene-PUW34_03295;Name=PUW34_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03295 CP118122.1 Protein Homology CDS 702546 703718 . + 0 ID=cds-WJG97578.1;Parent=gene-PUW34_03295;Dbxref=NCBI_GP:WJG97578.1;Name=WJG97578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=PUW34_03295;product=UxaA family hydrolase;protein_id=WJG97578.1;transl_table=11 CP118122.1 Genbank gene 703768 704721 . + . ID=gene-PUW34_03300;Name=PUW34_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03300 CP118122.1 Protein Homology CDS 703768 704721 . + 0 ID=cds-WJG97579.1;Parent=gene-PUW34_03300;Dbxref=NCBI_GP:WJG97579.1;Name=WJG97579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=PUW34_03300;product=2-keto-3-deoxygluconate permease 2;protein_id=WJG97579.1;transl_table=11 CP118122.1 Genbank pseudogene 704789 706717 . + . ID=gene-PUW34_03305;Name=PUW34_03305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_03305;pseudo=true CP118122.1 Protein Homology CDS 704789 706717 . + 0 ID=cds-PUW34_03305;Parent=gene-PUW34_03305;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=PUW34_03305;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 706810 707283 . + . ID=gene-PUW34_03310;Name=PUW34_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03310 CP118122.1 Protein Homology CDS 706810 707283 . + 0 ID=cds-WJG97580.1;Parent=gene-PUW34_03310;Dbxref=NCBI_GP:WJG97580.1;Name=WJG97580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=PUW34_03310;product=zinc ribbon-containing protein;protein_id=WJG97580.1;transl_table=11 CP118122.1 Genbank gene 707322 708257 . - . ID=gene-PUW34_03315;Name=PUW34_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03315 CP118122.1 Protein Homology CDS 707322 708257 . - 0 ID=cds-WJG98906.1;Parent=gene-PUW34_03315;Dbxref=NCBI_GP:WJG98906.1;Name=WJG98906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=PUW34_03315;product=tetratricopeptide repeat protein;protein_id=WJG98906.1;transl_table=11 CP118122.1 Genbank gene 708442 709149 . + . ID=gene-PUW34_03320;Name=PUW34_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03320 CP118122.1 Protein Homology CDS 708442 709149 . + 0 ID=cds-WJG97581.1;Parent=gene-PUW34_03320;Dbxref=NCBI_GP:WJG97581.1;Name=WJG97581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=PUW34_03320;product=DUF1266 domain-containing protein;protein_id=WJG97581.1;transl_table=11 CP118122.1 Genbank gene 709146 710579 . + . ID=gene-PUW34_03325;Name=PUW34_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03325 CP118122.1 Protein Homology CDS 709146 710579 . + 0 ID=cds-WJG97582.1;Parent=gene-PUW34_03325;Dbxref=NCBI_GP:WJG97582.1;Name=WJG97582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=PUW34_03325;product=J domain-containing protein;protein_id=WJG97582.1;transl_table=11 CP118122.1 Genbank gene 710591 711286 . + . ID=gene-PUW34_03330;Name=PUW34_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03330 CP118122.1 Protein Homology CDS 710591 711286 . + 0 ID=cds-WJG97583.1;Parent=gene-PUW34_03330;Dbxref=NCBI_GP:WJG97583.1;Name=WJG97583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=PUW34_03330;product=DUF1266 domain-containing protein;protein_id=WJG97583.1;transl_table=11 CP118122.1 Genbank gene 711283 712755 . + . ID=gene-PUW34_03335;Name=PUW34_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03335 CP118122.1 Protein Homology CDS 711283 712755 . + 0 ID=cds-WJG97584.1;Parent=gene-PUW34_03335;Dbxref=NCBI_GP:WJG97584.1;Name=WJG97584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=PUW34_03335;product=J domain-containing protein;protein_id=WJG97584.1;transl_table=11 CP118122.1 Genbank gene 712777 714456 . - . ID=gene-PUW34_03340;Name=PUW34_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03340 CP118122.1 Protein Homology CDS 712777 714456 . - 0 ID=cds-WJG97585.1;Parent=gene-PUW34_03340;Dbxref=NCBI_GP:WJG97585.1;Name=WJG97585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=PUW34_03340;product=molecular chaperone HscC;protein_id=WJG97585.1;transl_table=11 CP118122.1 Genbank gene 714532 715770 . - . ID=gene-PUW34_03345;Name=PUW34_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03345 CP118122.1 Protein Homology CDS 714532 715770 . - 0 ID=cds-WJG97586.1;Parent=gene-PUW34_03345;Dbxref=NCBI_GP:WJG97586.1;Name=WJG97586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=PUW34_03345;product=hypothetical protein;protein_id=WJG97586.1;transl_table=11 CP118122.1 Genbank gene 715802 716737 . - . ID=gene-PUW34_03350;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=PUW34_03350 CP118122.1 Protein Homology CDS 715802 716737 . - 0 ID=cds-WJG97587.1;Parent=gene-PUW34_03350;Dbxref=NCBI_GP:WJG97587.1;Name=WJG97587.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=PUW34_03350;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WJG97587.1;transl_table=11 CP118122.1 Genbank gene 716854 717579 . - . ID=gene-PUW34_03355;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=PUW34_03355 CP118122.1 Protein Homology CDS 716854 717579 . - 0 ID=cds-WJG97588.1;Parent=gene-PUW34_03355;Dbxref=NCBI_GP:WJG97588.1;Name=WJG97588.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=PUW34_03355;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WJG97588.1;transl_table=11 CP118122.1 Genbank pseudogene 717579 718252 . - . ID=gene-PUW34_03360;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=pseudogene;locus_tag=PUW34_03360;pseudo=true CP118122.1 Protein Homology CDS 717579 718252 . - 0 ID=cds-PUW34_03360;Parent=gene-PUW34_03360;Note=frameshifted;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=PUW34_03360;product=glutamate/aspartate ABC transporter permease GltK;pseudo=true;transl_table=11 CP118122.1 Genbank gene 718252 718992 . - . ID=gene-PUW34_03365;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=PUW34_03365 CP118122.1 Protein Homology CDS 718252 718992 . - 0 ID=cds-WJG97589.1;Parent=gene-PUW34_03365;Dbxref=NCBI_GP:WJG97589.1;Name=WJG97589.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=PUW34_03365;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WJG97589.1;transl_table=11 CP118122.1 Genbank pseudogene 719152 720060 . - . ID=gene-PUW34_03370;Name=PUW34_03370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_03370;pseudo=true CP118122.1 Protein Homology CDS 719152 720060 . - 0 ID=cds-PUW34_03370;Parent=gene-PUW34_03370;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=PUW34_03370;product=amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 720415 721953 . - . ID=gene-PUW34_03375;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=PUW34_03375 CP118122.1 Protein Homology CDS 720415 721953 . - 0 ID=cds-WJG98907.1;Parent=gene-PUW34_03375;Dbxref=NCBI_GP:WJG98907.1;Name=WJG98907.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=PUW34_03375;product=apolipoprotein N-acyltransferase;protein_id=WJG98907.1;transl_table=11 CP118122.1 Genbank gene 721973 722851 . - . ID=gene-PUW34_03380;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=PUW34_03380 CP118122.1 Protein Homology CDS 721973 722851 . - 0 ID=cds-WJG97590.1;Parent=gene-PUW34_03380;Dbxref=NCBI_GP:WJG97590.1;Name=WJG97590.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=PUW34_03380;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WJG97590.1;transl_table=11 CP118122.1 Genbank gene 723009 723482 . - . ID=gene-PUW34_03385;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=PUW34_03385 CP118122.1 Protein Homology CDS 723009 723482 . - 0 ID=cds-WJG97591.1;Parent=gene-PUW34_03385;Dbxref=NCBI_GP:WJG97591.1;Name=WJG97591.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=PUW34_03385;product=rRNA maturation RNase YbeY;protein_id=WJG97591.1;transl_table=11 CP118122.1 Genbank gene 723479 724525 . - . ID=gene-PUW34_03390;Name=PUW34_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03390 CP118122.1 Protein Homology CDS 723479 724525 . - 0 ID=cds-WJG97592.1;Parent=gene-PUW34_03390;Dbxref=NCBI_GP:WJG97592.1;Name=WJG97592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=PUW34_03390;product=PhoH family protein;protein_id=WJG97592.1;transl_table=11 CP118122.1 Genbank gene 724730 726154 . - . ID=gene-PUW34_03395;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=PUW34_03395 CP118122.1 Protein Homology CDS 724730 726154 . - 0 ID=cds-WJG97593.1;Parent=gene-PUW34_03395;Dbxref=NCBI_GP:WJG97593.1;Name=WJG97593.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=PUW34_03395;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WJG97593.1;transl_table=11 CP118122.1 Genbank gene 726298 727473 . + . ID=gene-PUW34_03400;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=PUW34_03400 CP118122.1 Protein Homology CDS 726298 727473 . + 0 ID=cds-WJG97594.1;Parent=gene-PUW34_03400;Dbxref=NCBI_GP:WJG97594.1;Name=WJG97594.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=PUW34_03400;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WJG97594.1;transl_table=11 CP118122.1 Genbank gene 727540 728115 . - . ID=gene-PUW34_03405;Name=PUW34_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03405 CP118122.1 Protein Homology CDS 727540 728115 . - 0 ID=cds-WJG97595.1;Parent=gene-PUW34_03405;Dbxref=NCBI_GP:WJG97595.1;Name=WJG97595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=PUW34_03405;product=hypothetical protein;protein_id=WJG97595.1;transl_table=11 CP118122.1 Genbank gene 728251 728325 . - . ID=gene-PUW34_03410;Name=PUW34_03410;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_03410 CP118122.1 tRNAscan-SE tRNA 728251 728325 . - . ID=rna-PUW34_03410;Parent=gene-PUW34_03410;anticodon=(pos:complement(728291..728293));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03410;product=tRNA-Gln CP118122.1 tRNAscan-SE exon 728251 728325 . - . ID=exon-PUW34_03410-1;Parent=rna-PUW34_03410;anticodon=(pos:complement(728291..728293));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03410;product=tRNA-Gln CP118122.1 Genbank gene 728369 728443 . - . ID=gene-PUW34_03415;Name=PUW34_03415;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_03415 CP118122.1 tRNAscan-SE tRNA 728369 728443 . - . ID=rna-PUW34_03415;Parent=gene-PUW34_03415;anticodon=(pos:complement(728409..728411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03415;product=tRNA-Gln CP118122.1 tRNAscan-SE exon 728369 728443 . - . ID=exon-PUW34_03415-1;Parent=rna-PUW34_03415;anticodon=(pos:complement(728409..728411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03415;product=tRNA-Gln CP118122.1 Genbank gene 728492 728565 . - . ID=gene-PUW34_03420;Name=PUW34_03420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_03420 CP118122.1 tRNAscan-SE tRNA 728492 728565 . - . ID=rna-PUW34_03420;Parent=gene-PUW34_03420;anticodon=(pos:complement(728529..728531));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03420;product=tRNA-Met CP118122.1 tRNAscan-SE exon 728492 728565 . - . ID=exon-PUW34_03420-1;Parent=rna-PUW34_03420;anticodon=(pos:complement(728529..728531));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03420;product=tRNA-Met CP118122.1 Genbank gene 728581 728655 . - . ID=gene-PUW34_03425;Name=PUW34_03425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_03425 CP118122.1 tRNAscan-SE tRNA 728581 728655 . - . ID=rna-PUW34_03425;Parent=gene-PUW34_03425;anticodon=(pos:complement(728621..728623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03425;product=tRNA-Gln CP118122.1 tRNAscan-SE exon 728581 728655 . - . ID=exon-PUW34_03425-1;Parent=rna-PUW34_03425;anticodon=(pos:complement(728621..728623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03425;product=tRNA-Gln CP118122.1 Genbank gene 728679 728763 . - . ID=gene-PUW34_03430;Name=PUW34_03430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_03430 CP118122.1 tRNAscan-SE tRNA 728679 728763 . - . ID=rna-PUW34_03430;Parent=gene-PUW34_03430;anticodon=(pos:complement(728727..728729));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03430;product=tRNA-Leu CP118122.1 tRNAscan-SE exon 728679 728763 . - . ID=exon-PUW34_03430-1;Parent=rna-PUW34_03430;anticodon=(pos:complement(728727..728729));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03430;product=tRNA-Leu CP118122.1 Genbank gene 728772 728848 . - . ID=gene-PUW34_03435;Name=PUW34_03435;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_03435 CP118122.1 tRNAscan-SE tRNA 728772 728848 . - . ID=rna-PUW34_03435;Parent=gene-PUW34_03435;anticodon=(pos:complement(728812..728814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03435;product=tRNA-Met CP118122.1 tRNAscan-SE exon 728772 728848 . - . ID=exon-PUW34_03435-1;Parent=rna-PUW34_03435;anticodon=(pos:complement(728812..728814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03435;product=tRNA-Met CP118122.1 Genbank gene 729070 730734 . - . ID=gene-PUW34_03440;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=PUW34_03440 CP118122.1 Protein Homology CDS 729070 730734 . - 0 ID=cds-WJG97596.1;Parent=gene-PUW34_03440;Dbxref=NCBI_GP:WJG97596.1;Name=WJG97596.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=PUW34_03440;product=asparagine synthase B;protein_id=WJG97596.1;transl_table=11 CP118122.1 Genbank gene 731024 731776 . - . ID=gene-PUW34_03445;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=PUW34_03445 CP118122.1 Protein Homology CDS 731024 731776 . - 0 ID=cds-WJG97597.1;Parent=gene-PUW34_03445;Dbxref=NCBI_GP:WJG97597.1;Name=WJG97597.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=PUW34_03445;product=ribonucleotide monophosphatase NagD;protein_id=WJG97597.1;transl_table=11 CP118122.1 Genbank gene 731823 733043 . - . ID=gene-PUW34_03450;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=PUW34_03450 CP118122.1 Protein Homology CDS 731823 733043 . - 0 ID=cds-WJG97598.1;Parent=gene-PUW34_03450;Dbxref=NCBI_GP:WJG97598.1;Name=WJG97598.1;gbkey=CDS;gene=nagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=PUW34_03450;product=DNA-binding transcriptional regulator NagC;protein_id=WJG97598.1;transl_table=11 CP118122.1 Genbank gene 733048 734202 . - . ID=gene-PUW34_03455;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PUW34_03455 CP118122.1 Protein Homology CDS 733048 734202 . - 0 ID=cds-WJG97599.1;Parent=gene-PUW34_03455;Dbxref=NCBI_GP:WJG97599.1;Name=WJG97599.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=PUW34_03455;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WJG97599.1;transl_table=11 CP118122.1 Genbank gene 734261 735061 . - . ID=gene-PUW34_03460;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=PUW34_03460 CP118122.1 Protein Homology CDS 734261 735061 . - 0 ID=cds-WJG97600.1;Parent=gene-PUW34_03460;Dbxref=NCBI_GP:WJG97600.1;Name=WJG97600.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=PUW34_03460;product=glucosamine-6-phosphate deaminase;protein_id=WJG97600.1;transl_table=11 CP118122.1 Genbank gene 735387 737339 . + . ID=gene-PUW34_03465;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=PUW34_03465 CP118122.1 Protein Homology CDS 735387 737339 . + 0 ID=cds-WJG97601.1;Parent=gene-PUW34_03465;Dbxref=NCBI_GP:WJG97601.1;Name=WJG97601.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=PUW34_03465;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WJG97601.1;transl_table=11 CP118122.1 Genbank gene 737550 739217 . + . ID=gene-PUW34_03470;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=PUW34_03470 CP118122.1 Protein Homology CDS 737550 739217 . + 0 ID=cds-WJG97602.1;Parent=gene-PUW34_03470;Dbxref=NCBI_GP:WJG97602.1;Name=WJG97602.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=PUW34_03470;product=glutamine--tRNA ligase;protein_id=WJG97602.1;transl_table=11 CP118122.1 Genbank gene 739878 741284 . + . ID=gene-PUW34_03475;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=PUW34_03475 CP118122.1 Protein Homology CDS 739878 741284 . + 0 ID=cds-WJG97603.1;Parent=gene-PUW34_03475;Dbxref=NCBI_GP:WJG97603.1;Name=WJG97603.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=PUW34_03475;product=chitoporin;protein_id=WJG97603.1;transl_table=11 CP118122.1 Genbank gene 741334 741666 . + . ID=gene-PUW34_03480;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=PUW34_03480 CP118122.1 Protein Homology CDS 741334 741666 . + 0 ID=cds-WJG97604.1;Parent=gene-PUW34_03480;Dbxref=NCBI_GP:WJG97604.1;Name=WJG97604.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=PUW34_03480;product=ChiQ/YbfN family lipoprotein;protein_id=WJG97604.1;transl_table=11 CP118122.1 Genbank gene 741715 743019 . - . ID=gene-PUW34_03485;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=PUW34_03485 CP118122.1 Protein Homology CDS 741715 743019 . - 0 ID=cds-WJG97605.1;Parent=gene-PUW34_03485;Dbxref=NCBI_GP:WJG97605.1;Name=WJG97605.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=PUW34_03485;product=tricarballylate/proton symporter TcuC;protein_id=WJG97605.1;transl_table=11 CP118122.1 Genbank gene 743070 744209 . - . ID=gene-PUW34_03490;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=PUW34_03490 CP118122.1 Protein Homology CDS 743070 744209 . - 0 ID=cds-WJG97606.1;Parent=gene-PUW34_03490;Dbxref=NCBI_GP:WJG97606.1;Name=WJG97606.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=PUW34_03490;product=tricarballylate utilization protein TcuB;protein_id=WJG97606.1;transl_table=11 CP118122.1 Genbank gene 744196 745599 . - . ID=gene-PUW34_03495;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=PUW34_03495 CP118122.1 Protein Homology CDS 744196 745599 . - 0 ID=cds-WJG97607.1;Parent=gene-PUW34_03495;Dbxref=NCBI_GP:WJG97607.1;Name=WJG97607.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=PUW34_03495;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WJG97607.1;transl_table=11 CP118122.1 Genbank gene 745697 746623 . - . ID=gene-PUW34_03500;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=PUW34_03500 CP118122.1 Protein Homology CDS 745697 746623 . - 0 ID=cds-WJG97608.1;Parent=gene-PUW34_03500;Dbxref=NCBI_GP:WJG97608.1;Name=WJG97608.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=PUW34_03500;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WJG97608.1;transl_table=11 CP118122.1 Genbank gene 746738 747190 . - . ID=gene-PUW34_03505;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=PUW34_03505 CP118122.1 Protein Homology CDS 746738 747190 . - 0 ID=cds-WJG97609.1;Parent=gene-PUW34_03505;Dbxref=NCBI_GP:WJG97609.1;Name=WJG97609.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=PUW34_03505;product=ferric iron uptake transcriptional regulator;protein_id=WJG97609.1;transl_table=11 CP118122.1 Genbank pseudogene 747183 747268 . - . ID=gene-PUW34_03510;Name=PUW34_03510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_03510;pseudo=true CP118122.1 Protein Homology CDS 747183 747268 . - 0 ID=cds-PUW34_03510;Parent=gene-PUW34_03510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=PUW34_03510;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 CP118122.1 Genbank gene 747472 748002 . - . ID=gene-PUW34_03515;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=PUW34_03515 CP118122.1 Protein Homology CDS 747472 748002 . - 0 ID=cds-WJG97610.1;Parent=gene-PUW34_03515;Dbxref=NCBI_GP:WJG97610.1;Name=WJG97610.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=PUW34_03515;product=flavodoxin FldA;protein_id=WJG97610.1;transl_table=11 CP118122.1 Genbank gene 748153 748446 . - . ID=gene-PUW34_03520;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=PUW34_03520 CP118122.1 Protein Homology CDS 748153 748446 . - 0 ID=cds-WJG97611.1;Parent=gene-PUW34_03520;Dbxref=NCBI_GP:WJG97611.1;Name=WJG97611.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=PUW34_03520;product=LexA regulated protein;protein_id=WJG97611.1;transl_table=11 CP118122.1 Genbank gene 748580 749350 . - . ID=gene-PUW34_03525;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=PUW34_03525 CP118122.1 Protein Homology CDS 748580 749350 . - 0 ID=cds-WJG97612.1;Parent=gene-PUW34_03525;Dbxref=NCBI_GP:WJG97612.1;Name=WJG97612.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=PUW34_03525;product=esterase;protein_id=WJG97612.1;transl_table=11 CP118122.1 Genbank gene 749535 750077 . + . ID=gene-PUW34_03530;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=PUW34_03530 CP118122.1 Protein Homology CDS 749535 750077 . + 0 ID=cds-WJG97613.1;Parent=gene-PUW34_03530;Dbxref=NCBI_GP:WJG97613.1;Name=WJG97613.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=PUW34_03530;product=replication initiation negative regulator SeqA;protein_id=WJG97613.1;transl_table=11 CP118122.1 Genbank gene 750102 751742 . + . ID=gene-PUW34_03535;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=PUW34_03535 CP118122.1 Protein Homology CDS 750102 751742 . + 0 ID=cds-WJG97614.1;Parent=gene-PUW34_03535;Dbxref=NCBI_GP:WJG97614.1;Name=WJG97614.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=PUW34_03535;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WJG97614.1;transl_table=11 CP118122.1 Genbank gene 751857 752189 . - . ID=gene-PUW34_03540;Name=PUW34_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03540 CP118122.1 Protein Homology CDS 751857 752189 . - 0 ID=cds-WJG98908.1;Parent=gene-PUW34_03540;Dbxref=NCBI_GP:WJG98908.1;Name=WJG98908.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024304.2;locus_tag=PUW34_03540;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WJG98908.1;transl_table=11 CP118122.1 Genbank pseudogene 752198 752341 . - . ID=gene-PUW34_03545;Name=PUW34_03545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_03545;pseudo=true CP118122.1 Protein Homology CDS 752198 752341 . - 0 ID=cds-PUW34_03545;Parent=gene-PUW34_03545;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024304.2;locus_tag=PUW34_03545;product=pyridoxamine 5'-phosphate oxidase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 752406 753725 . - . ID=gene-PUW34_03550;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=PUW34_03550 CP118122.1 Protein Homology CDS 752406 753725 . - 0 ID=cds-WJG97615.1;Parent=gene-PUW34_03550;Dbxref=NCBI_GP:WJG97615.1;Name=WJG97615.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=PUW34_03550;product=putrescine-ornithine antiporter;protein_id=WJG97615.1;transl_table=11 CP118122.1 Genbank gene 753722 755920 . - . ID=gene-PUW34_03555;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=PUW34_03555 CP118122.1 Protein Homology CDS 753722 755920 . - 0 ID=cds-WJG97616.1;Parent=gene-PUW34_03555;Dbxref=NCBI_GP:WJG97616.1;Name=WJG97616.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=PUW34_03555;product=ornithine decarboxylase SpeF;protein_id=WJG97616.1;transl_table=11 CP118122.1 Genbank gene 756300 756404 . - . ID=gene-PUW34_03560;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=PUW34_03560 CP118122.1 Protein Homology CDS 756300 756404 . - 0 ID=cds-WJG97617.1;Parent=gene-PUW34_03560;Dbxref=NCBI_GP:WJG97617.1;Name=WJG97617.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=PUW34_03560;product=leader peptide SpeFL;protein_id=WJG97617.1;transl_table=11 CP118122.1 Genbank gene 756680 757357 . - . ID=gene-PUW34_03565;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=PUW34_03565 CP118122.1 Protein Homology CDS 756680 757357 . - 0 ID=cds-WJG97618.1;Parent=gene-PUW34_03565;Dbxref=NCBI_GP:WJG97618.1;Name=WJG97618.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=PUW34_03565;product=two-component system response regulator KdpE;protein_id=WJG97618.1;transl_table=11 CP118122.1 Genbank pseudogene 757354 760054 . - . ID=gene-PUW34_03570;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=pseudogene;locus_tag=PUW34_03570;pseudo=true CP118122.1 Protein Homology CDS 757354 760054 . - 0 ID=cds-PUW34_03570;Parent=gene-PUW34_03570;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=PUW34_03570;product=two-component system sensor histidine kinase KdpD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 760051 760635 . - . ID=gene-PUW34_03575;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=PUW34_03575 CP118122.1 Protein Homology CDS 760051 760635 . - 0 ID=cds-WJG98909.1;Parent=gene-PUW34_03575;Dbxref=NCBI_GP:WJG98909.1;Name=WJG98909.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=PUW34_03575;product=potassium-transporting ATPase subunit KdpC;protein_id=WJG98909.1;transl_table=11 CP118122.1 Genbank gene 760644 762701 . - . ID=gene-PUW34_03580;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=PUW34_03580 CP118122.1 Protein Homology CDS 760644 762701 . - 0 ID=cds-WJG97619.1;Parent=gene-PUW34_03580;Dbxref=NCBI_GP:WJG97619.1;Name=WJG97619.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088017.1;locus_tag=PUW34_03580;product=potassium-transporting ATPase subunit KdpB;protein_id=WJG97619.1;transl_table=11 CP118122.1 Genbank gene 762722 764401 . - . ID=gene-PUW34_03585;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=PUW34_03585 CP118122.1 Protein Homology CDS 762722 764401 . - 0 ID=cds-WJG97620.1;Parent=gene-PUW34_03585;Dbxref=NCBI_GP:WJG97620.1;Name=WJG97620.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=PUW34_03585;product=potassium-transporting ATPase subunit KdpA;protein_id=WJG97620.1;transl_table=11 CP118122.1 Genbank gene 764401 764490 . - . ID=gene-PUW34_03590;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=PUW34_03590 CP118122.1 Protein Homology CDS 764401 764490 . - 0 ID=cds-WJG97621.1;Parent=gene-PUW34_03590;Dbxref=NCBI_GP:WJG97621.1;Name=WJG97621.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=PUW34_03590;product=K(+)-transporting ATPase subunit F;protein_id=WJG97621.1;transl_table=11 CP118122.1 Genbank gene 764827 765033 . + . ID=gene-PUW34_03595;Name=PUW34_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03595 CP118122.1 Protein Homology CDS 764827 765033 . + 0 ID=cds-WJG97622.1;Parent=gene-PUW34_03595;Dbxref=NCBI_GP:WJG97622.1;Name=WJG97622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=PUW34_03595;product=YbfA family protein;protein_id=WJG97622.1;transl_table=11 CP118122.1 Genbank gene 765145 766566 . + . ID=gene-PUW34_03600;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=PUW34_03600 CP118122.1 Protein Homology CDS 765145 766566 . + 0 ID=cds-WJG97623.1;Parent=gene-PUW34_03600;Dbxref=NCBI_GP:WJG97623.1;Name=WJG97623.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=PUW34_03600;product=deoxyribodipyrimidine photo-lyase;protein_id=WJG97623.1;transl_table=11 CP118122.1 Genbank gene 766604 768085 . - . ID=gene-PUW34_03605;Name=PUW34_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03605 CP118122.1 Protein Homology CDS 766604 768085 . - 0 ID=cds-WJG97624.1;Parent=gene-PUW34_03605;Dbxref=NCBI_GP:WJG97624.1;Name=WJG97624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=PUW34_03605;product=MFS transporter;protein_id=WJG97624.1;transl_table=11 CP118122.1 Genbank gene 768414 769157 . + . ID=gene-PUW34_03610;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=PUW34_03610 CP118122.1 Protein Homology CDS 768414 769157 . + 0 ID=cds-WJG98910.1;Parent=gene-PUW34_03610;Dbxref=NCBI_GP:WJG98910.1;Name=WJG98910.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=PUW34_03610;product=radiation resistance protein YbgI;protein_id=WJG98910.1;transl_table=11 CP118122.1 Genbank gene 769173 769829 . + . ID=gene-PUW34_03615;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=PUW34_03615 CP118122.1 Protein Homology CDS 769173 769829 . + 0 ID=cds-WJG97625.1;Parent=gene-PUW34_03615;Dbxref=NCBI_GP:WJG97625.1;Name=WJG97625.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=PUW34_03615;product=5-oxoprolinase subunit PxpB;protein_id=WJG97625.1;transl_table=11 CP118122.1 Genbank gene 769823 770755 . + . ID=gene-PUW34_03620;Name=PUW34_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03620 CP118122.1 Protein Homology CDS 769823 770755 . + 0 ID=cds-WJG97626.1;Parent=gene-PUW34_03620;Dbxref=NCBI_GP:WJG97626.1;Name=WJG97626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=PUW34_03620;product=biotin-dependent carboxyltransferase family protein;protein_id=WJG97626.1;transl_table=11 CP118122.1 Genbank gene 770745 771479 . + . ID=gene-PUW34_03625;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=PUW34_03625 CP118122.1 Protein Homology CDS 770745 771479 . + 0 ID=cds-WJG97627.1;Parent=gene-PUW34_03625;Dbxref=NCBI_GP:WJG97627.1;Name=WJG97627.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=PUW34_03625;product=5-oxoprolinase subunit PxpA;protein_id=WJG97627.1;transl_table=11 CP118122.1 Genbank gene 771601 772392 . + . ID=gene-PUW34_03630;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=PUW34_03630 CP118122.1 Protein Homology CDS 771601 772392 . + 0 ID=cds-WJG97628.1;Parent=gene-PUW34_03630;Dbxref=NCBI_GP:WJG97628.1;Name=WJG97628.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=PUW34_03630;product=endonuclease VIII;protein_id=WJG97628.1;transl_table=11 CP118122.1 Genbank gene 772447 773493 . - . ID=gene-PUW34_03635;Name=PUW34_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03635 CP118122.1 Protein Homology CDS 772447 773493 . - 0 ID=cds-WJG97629.1;Parent=gene-PUW34_03635;Dbxref=NCBI_GP:WJG97629.1;Name=WJG97629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=PUW34_03635;product=AbrB family transcriptional regulator;protein_id=WJG97629.1;transl_table=11 CP118122.1 Genbank gene 773630 774913 . - . ID=gene-PUW34_03640;Name=PUW34_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03640 CP118122.1 Protein Homology CDS 773630 774913 . - 0 ID=cds-WJG97630.1;Parent=gene-PUW34_03640;Dbxref=NCBI_GP:WJG97630.1;Name=WJG97630.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=PUW34_03640;product=citrate synthase;protein_id=WJG97630.1;transl_table=11 CP118122.1 Genbank gene 775014 775259 . + . ID=gene-PUW34_03645;Name=PUW34_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03645 CP118122.1 GeneMarkS-2+ CDS 775014 775259 . + 0 ID=cds-WJG97631.1;Parent=gene-PUW34_03645;Dbxref=NCBI_GP:WJG97631.1;Name=WJG97631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_03645;product=hypothetical protein;protein_id=WJG97631.1;transl_table=11 CP118122.1 Genbank gene 775653 776057 . + . ID=gene-PUW34_03650;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=PUW34_03650 CP118122.1 Protein Homology CDS 775653 776057 . + 0 ID=cds-WJG97632.1;Parent=gene-PUW34_03650;Dbxref=NCBI_GP:WJG97632.1;Name=WJG97632.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=PUW34_03650;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WJG97632.1;transl_table=11 CP118122.1 Genbank gene 776051 776398 . + . ID=gene-PUW34_03655;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=PUW34_03655 CP118122.1 Protein Homology CDS 776051 776398 . + 0 ID=cds-WJG97633.1;Parent=gene-PUW34_03655;Dbxref=NCBI_GP:WJG97633.1;Name=WJG97633.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=PUW34_03655;product=succinate dehydrogenase membrane anchor subunit;protein_id=WJG97633.1;transl_table=11 CP118122.1 Genbank gene 776398 778164 . + . ID=gene-PUW34_03660;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=PUW34_03660 CP118122.1 Protein Homology CDS 776398 778164 . + 0 ID=cds-WJG97634.1;Parent=gene-PUW34_03660;Dbxref=NCBI_GP:WJG97634.1;Name=WJG97634.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=PUW34_03660;product=succinate dehydrogenase flavoprotein subunit;protein_id=WJG97634.1;transl_table=11 CP118122.1 Genbank gene 778181 778897 . + . ID=gene-PUW34_03665;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=PUW34_03665 CP118122.1 Protein Homology CDS 778181 778897 . + 0 ID=cds-WJG98911.1;Parent=gene-PUW34_03665;Dbxref=NCBI_GP:WJG98911.1;Name=WJG98911.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=PUW34_03665;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WJG98911.1;transl_table=11 CP118122.1 Genbank gene 779421 782222 . + . ID=gene-PUW34_03670;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=PUW34_03670 CP118122.1 Protein Homology CDS 779421 782222 . + 0 ID=cds-WJG97635.1;Parent=gene-PUW34_03670;Dbxref=NCBI_GP:WJG97635.1;Name=WJG97635.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=PUW34_03670;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WJG97635.1;transl_table=11 CP118122.1 Genbank gene 782237 783445 . + . ID=gene-PUW34_03675;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=PUW34_03675 CP118122.1 Protein Homology CDS 782237 783445 . + 0 ID=cds-WJG97636.1;Parent=gene-PUW34_03675;Dbxref=NCBI_GP:WJG97636.1;Name=WJG97636.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=PUW34_03675;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WJG97636.1;transl_table=11 CP118122.1 Genbank pseudogene 783587 784752 . + . ID=gene-PUW34_03680;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=pseudogene;locus_tag=PUW34_03680;pseudo=true CP118122.1 Protein Homology CDS 783587 784752 . + 0 ID=cds-PUW34_03680;Parent=gene-PUW34_03680;Note=frameshifted;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=PUW34_03680;product=ADP-forming succinate--CoA ligase subunit beta;pseudo=true;transl_table=11 CP118122.1 Genbank gene 784752 785621 . + . ID=gene-PUW34_03685;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=PUW34_03685 CP118122.1 Protein Homology CDS 784752 785621 . + 0 ID=cds-WJG97637.1;Parent=gene-PUW34_03685;Dbxref=NCBI_GP:WJG97637.1;Name=WJG97637.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=PUW34_03685;product=succinate--CoA ligase subunit alpha;protein_id=WJG97637.1;transl_table=11 CP118122.1 Genbank gene 787204 788772 . + . ID=gene-PUW34_03690;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=PUW34_03690 CP118122.1 Protein Homology CDS 787204 788772 . + 0 ID=cds-WJG98912.1;Parent=gene-PUW34_03690;Dbxref=NCBI_GP:WJG98912.1;Name=WJG98912.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=PUW34_03690;product=cytochrome ubiquinol oxidase subunit I;protein_id=WJG98912.1;transl_table=11 CP118122.1 Genbank gene 788788 789927 . + . ID=gene-PUW34_03695;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PUW34_03695 CP118122.1 Protein Homology CDS 788788 789927 . + 0 ID=cds-WJG97638.1;Parent=gene-PUW34_03695;Dbxref=NCBI_GP:WJG97638.1;Name=WJG97638.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=PUW34_03695;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WJG97638.1;transl_table=11 CP118122.1 Genbank gene 789942 790055 . + . ID=gene-PUW34_03700;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=PUW34_03700 CP118122.1 Protein Homology CDS 789942 790055 . + 0 ID=cds-WJG97639.1;Parent=gene-PUW34_03700;Dbxref=NCBI_GP:WJG97639.1;Name=WJG97639.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=PUW34_03700;product=cytochrome bd-I oxidase subunit CydX;protein_id=WJG97639.1;transl_table=11 CP118122.1 Genbank pseudogene 790055 790347 . + . ID=gene-PUW34_03705;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=pseudogene;locus_tag=PUW34_03705;pseudo=true CP118122.1 Protein Homology CDS 790055 790347 . + 0 ID=cds-PUW34_03705;Parent=gene-PUW34_03705;Note=frameshifted;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=PUW34_03705;product=cyd operon protein YbgE;pseudo=true;transl_table=11 CP118122.1 Genbank gene 790576 790980 . + . ID=gene-PUW34_03710;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=PUW34_03710 CP118122.1 Protein Homology CDS 790576 790980 . + 0 ID=cds-WJG97640.1;Parent=gene-PUW34_03710;Dbxref=NCBI_GP:WJG97640.1;Name=WJG97640.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=PUW34_03710;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WJG97640.1;transl_table=11 CP118122.1 Genbank gene 790977 791669 . + . ID=gene-PUW34_03715;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=PUW34_03715 CP118122.1 Protein Homology CDS 790977 791669 . + 0 ID=cds-WJG97641.1;Parent=gene-PUW34_03715;Dbxref=NCBI_GP:WJG97641.1;Name=WJG97641.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=PUW34_03715;product=Tol-Pal system protein TolQ;protein_id=WJG97641.1;transl_table=11 CP118122.1 Genbank gene 791673 792101 . + . ID=gene-PUW34_03720;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=PUW34_03720 CP118122.1 Protein Homology CDS 791673 792101 . + 0 ID=cds-WJG97642.1;Parent=gene-PUW34_03720;Dbxref=NCBI_GP:WJG97642.1;Name=WJG97642.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=PUW34_03720;product=colicin uptake protein TolR;protein_id=WJG97642.1;transl_table=11 CP118122.1 Genbank gene 792166 793476 . + . ID=gene-PUW34_03725;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=PUW34_03725 CP118122.1 Protein Homology CDS 792166 793476 . + 0 ID=cds-WJG97643.1;Parent=gene-PUW34_03725;Dbxref=NCBI_GP:WJG97643.1;Name=WJG97643.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=PUW34_03725;product=cell envelope integrity protein TolA;protein_id=WJG97643.1;transl_table=11 CP118122.1 Genbank pseudogene 793600 794891 . + . ID=gene-PUW34_03730;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=pseudogene;locus_tag=PUW34_03730;pseudo=true CP118122.1 Protein Homology CDS 793600 794891 . + 0 ID=cds-PUW34_03730;Parent=gene-PUW34_03730;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=PUW34_03730;product=Tol-Pal system beta propeller repeat protein TolB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 794926 795450 . + . ID=gene-PUW34_03735;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=PUW34_03735 CP118122.1 Protein Homology CDS 794926 795450 . + 0 ID=cds-WJG97644.1;Parent=gene-PUW34_03735;Dbxref=NCBI_GP:WJG97644.1;Name=WJG97644.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=PUW34_03735;product=peptidoglycan-associated lipoprotein Pal;protein_id=WJG97644.1;transl_table=11 CP118122.1 Genbank gene 795460 796248 . + . ID=gene-PUW34_03740;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=PUW34_03740 CP118122.1 Protein Homology CDS 795460 796248 . + 0 ID=cds-WJG97645.1;Parent=gene-PUW34_03740;Dbxref=NCBI_GP:WJG97645.1;Name=WJG97645.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=PUW34_03740;product=cell division protein CpoB;protein_id=WJG97645.1;transl_table=11 CP118122.1 Genbank gene 796413 796488 . + . ID=gene-PUW34_03745;Name=PUW34_03745;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_03745 CP118122.1 tRNAscan-SE tRNA 796413 796488 . + . ID=rna-PUW34_03745;Parent=gene-PUW34_03745;anticodon=(pos:796446..796448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03745;product=tRNA-Lys CP118122.1 tRNAscan-SE exon 796413 796488 . + . ID=exon-PUW34_03745-1;Parent=rna-PUW34_03745;anticodon=(pos:796446..796448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03745;product=tRNA-Lys CP118122.1 Genbank gene 796625 796700 . + . ID=gene-PUW34_03750;Name=PUW34_03750;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_03750 CP118122.1 tRNAscan-SE tRNA 796625 796700 . + . ID=rna-PUW34_03750;Parent=gene-PUW34_03750;anticodon=(pos:796658..796660);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03750;product=tRNA-Val CP118122.1 tRNAscan-SE exon 796625 796700 . + . ID=exon-PUW34_03750-1;Parent=rna-PUW34_03750;anticodon=(pos:796658..796660);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03750;product=tRNA-Val CP118122.1 Genbank gene 796704 796779 . + . ID=gene-PUW34_03755;Name=PUW34_03755;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_03755 CP118122.1 tRNAscan-SE tRNA 796704 796779 . + . ID=rna-PUW34_03755;Parent=gene-PUW34_03755;anticodon=(pos:796737..796739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03755;product=tRNA-Lys CP118122.1 tRNAscan-SE exon 796704 796779 . + . ID=exon-PUW34_03755-1;Parent=rna-PUW34_03755;anticodon=(pos:796737..796739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_03755;product=tRNA-Lys CP118122.1 Genbank gene 797198 798241 . + . ID=gene-PUW34_03760;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=PUW34_03760 CP118122.1 Protein Homology CDS 797198 798241 . + 0 ID=cds-WJG97646.1;Parent=gene-PUW34_03760;Dbxref=NCBI_GP:WJG97646.1;Name=WJG97646.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=PUW34_03760;product=quinolinate synthase NadA;protein_id=WJG97646.1;transl_table=11 CP118122.1 Genbank gene 798266 798985 . + . ID=gene-PUW34_03765;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=PUW34_03765 CP118122.1 Protein Homology CDS 798266 798985 . + 0 ID=cds-WJG97647.1;Parent=gene-PUW34_03765;Dbxref=NCBI_GP:WJG97647.1;Name=WJG97647.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=PUW34_03765;product=nicotinamide riboside transporter PnuC;protein_id=WJG97647.1;transl_table=11 CP118122.1 Genbank gene 798982 799920 . - . ID=gene-PUW34_03770;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=PUW34_03770 CP118122.1 Protein Homology CDS 798982 799920 . - 0 ID=cds-WJG97648.1;Parent=gene-PUW34_03770;Dbxref=NCBI_GP:WJG97648.1;Name=WJG97648.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=PUW34_03770;product=CDF family zinc transporter ZitB;protein_id=WJG97648.1;transl_table=11 CP118122.1 Genbank gene 800031 800417 . - . ID=gene-PUW34_03775;Name=PUW34_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03775 CP118122.1 Protein Homology CDS 800031 800417 . - 0 ID=cds-WJG97649.1;Parent=gene-PUW34_03775;Dbxref=NCBI_GP:WJG97649.1;Name=WJG97649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=PUW34_03775;product=YbgS-like family protein;protein_id=WJG97649.1;transl_table=11 CP118122.1 Genbank pseudogene 800737 801788 . + . ID=gene-PUW34_03780;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=pseudogene;locus_tag=PUW34_03780;pseudo=true CP118122.1 Protein Homology CDS 800737 801788 . + 0 ID=cds-PUW34_03780;Parent=gene-PUW34_03780;Note=frameshifted;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=PUW34_03780;product=3-deoxy-7-phosphoheptulonate synthase AroG;pseudo=true;transl_table=11 CP118122.1 Genbank gene 801882 802427 . - . ID=gene-PUW34_03785;Name=PUW34_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03785 CP118122.1 Protein Homology CDS 801882 802427 . - 0 ID=cds-WJG97650.1;Parent=gene-PUW34_03785;Dbxref=NCBI_GP:WJG97650.1;Name=WJG97650.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=PUW34_03785;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WJG97650.1;transl_table=11 CP118122.1 Genbank gene 802442 803287 . - . ID=gene-PUW34_03790;Name=PUW34_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03790 CP118122.1 Protein Homology CDS 802442 803287 . - 0 ID=cds-WJG97651.1;Parent=gene-PUW34_03790;Dbxref=NCBI_GP:WJG97651.1;Name=WJG97651.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=PUW34_03790;product=fumarate hydratase;protein_id=WJG97651.1;transl_table=11 CP118122.1 Genbank pseudogene 803417 804306 . + . ID=gene-PUW34_03795;Name=PUW34_03795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_03795;pseudo=true CP118122.1 Protein Homology CDS 803417 804306 . + 0 ID=cds-PUW34_03795;Parent=gene-PUW34_03795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=PUW34_03795;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 804307 805290 . - . ID=gene-PUW34_03800;Name=PUW34_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03800 CP118122.1 Protein Homology CDS 804307 805290 . - 0 ID=cds-WJG97652.1;Parent=gene-PUW34_03800;Dbxref=NCBI_GP:WJG97652.1;Name=WJG97652.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=PUW34_03800;product=LysR family transcriptional regulator;protein_id=WJG97652.1;transl_table=11 CP118122.1 Genbank gene 805513 806781 . + . ID=gene-PUW34_03805;Name=PUW34_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03805 CP118122.1 Protein Homology CDS 805513 806781 . + 0 ID=cds-WJG97653.1;Parent=gene-PUW34_03805;Dbxref=NCBI_GP:WJG97653.1;Name=WJG97653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=PUW34_03805;product=SLC13 family permease;protein_id=WJG97653.1;transl_table=11 CP118122.1 Genbank gene 806831 807070 . + . ID=gene-PUW34_03810;Name=PUW34_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03810 CP118122.1 Protein Homology CDS 806831 807070 . + 0 ID=cds-WJG97654.1;Parent=gene-PUW34_03810;Dbxref=NCBI_GP:WJG97654.1;Name=WJG97654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=PUW34_03810;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJG97654.1;transl_table=11 CP118122.1 Genbank gene 807087 808859 . + . ID=gene-PUW34_03815;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW34_03815 CP118122.1 Protein Homology CDS 807087 808859 . + 0 ID=cds-WJG97655.1;Parent=gene-PUW34_03815;Dbxref=NCBI_GP:WJG97655.1;Name=WJG97655.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW34_03815;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJG97655.1;transl_table=11 CP118122.1 Genbank gene 808872 810146 . + . ID=gene-PUW34_03820;Name=PUW34_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03820 CP118122.1 Protein Homology CDS 808872 810146 . + 0 ID=cds-WJG97656.1;Parent=gene-PUW34_03820;Dbxref=NCBI_GP:WJG97656.1;Name=WJG97656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW34_03820;product=oxalacetate decarboxylase subunit beta;protein_id=WJG97656.1;transl_table=11 CP118122.1 Genbank gene 810265 810963 . + . ID=gene-PUW34_03825;Name=PUW34_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03825 CP118122.1 Protein Homology CDS 810265 810963 . + 0 ID=cds-WJG97657.1;Parent=gene-PUW34_03825;Dbxref=NCBI_GP:WJG97657.1;Name=WJG97657.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=PUW34_03825;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WJG97657.1;transl_table=11 CP118122.1 Genbank gene 811343 812422 . + . ID=gene-PUW34_03830;Name=PUW34_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03830 CP118122.1 Protein Homology CDS 811343 812422 . + 0 ID=cds-WJG97658.1;Parent=gene-PUW34_03830;Dbxref=NCBI_GP:WJG97658.1;Name=WJG97658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=PUW34_03830;product=iron ABC transporter permease;protein_id=WJG97658.1;transl_table=11 CP118122.1 Genbank gene 812422 813198 . + . ID=gene-PUW34_03835;Name=PUW34_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03835 CP118122.1 Protein Homology CDS 812422 813198 . + 0 ID=cds-WJG97659.1;Parent=gene-PUW34_03835;Dbxref=NCBI_GP:WJG97659.1;Name=WJG97659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=PUW34_03835;product=ABC transporter ATP-binding protein;protein_id=WJG97659.1;transl_table=11 CP118122.1 Genbank gene 813289 814041 . - . ID=gene-PUW34_03840;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=PUW34_03840 CP118122.1 Protein Homology CDS 813289 814041 . - 0 ID=cds-WJG97660.1;Parent=gene-PUW34_03840;Dbxref=NCBI_GP:WJG97660.1;Name=WJG97660.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=PUW34_03840;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WJG97660.1;transl_table=11 CP118122.1 Genbank pseudogene 814265 815304 . - . ID=gene-PUW34_03845;Name=galM;gbkey=Gene;gene=galM;gene_biotype=pseudogene;locus_tag=PUW34_03845;pseudo=true CP118122.1 Protein Homology CDS 814265 815304 . - 0 ID=cds-PUW34_03845;Parent=gene-PUW34_03845;Note=frameshifted;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=PUW34_03845;product=galactose-1-epimerase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 815298 816446 . - . ID=gene-PUW34_03850;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=PUW34_03850 CP118122.1 Protein Homology CDS 815298 816446 . - 0 ID=cds-WJG97661.1;Parent=gene-PUW34_03850;Dbxref=NCBI_GP:WJG97661.1;Name=WJG97661.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=PUW34_03850;product=galactokinase;protein_id=WJG97661.1;transl_table=11 CP118122.1 Genbank pseudogene 816449 817494 . - . ID=gene-PUW34_03855;Name=galT;gbkey=Gene;gene=galT;gene_biotype=pseudogene;locus_tag=PUW34_03855;pseudo=true CP118122.1 Protein Homology CDS 816449 817494 . - 0 ID=cds-PUW34_03855;Parent=gene-PUW34_03855;Note=frameshifted;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=PUW34_03855;product=galactose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 817505 818521 . - . ID=gene-PUW34_03860;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=PUW34_03860 CP118122.1 Protein Homology CDS 817505 818521 . - 0 ID=cds-WJG97662.1;Parent=gene-PUW34_03860;Dbxref=NCBI_GP:WJG97662.1;Name=WJG97662.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=PUW34_03860;product=UDP-glucose 4-epimerase GalE;protein_id=WJG97662.1;transl_table=11 CP118122.1 Genbank gene 818744 819652 . - . ID=gene-PUW34_03865;Name=PUW34_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03865 CP118122.1 Protein Homology CDS 818744 819652 . - 0 ID=cds-WJG97663.1;Parent=gene-PUW34_03865;Dbxref=NCBI_GP:WJG97663.1;Name=WJG97663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=PUW34_03865;product=DUF2167 domain-containing protein;protein_id=WJG97663.1;transl_table=11 CP118122.1 Genbank pseudogene 819823 821297 . - . ID=gene-PUW34_03870;Name=modF;gbkey=Gene;gene=modF;gene_biotype=pseudogene;locus_tag=PUW34_03870;pseudo=true CP118122.1 Protein Homology CDS 819823 821297 . - 0 ID=cds-PUW34_03870;Parent=gene-PUW34_03870;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=PUW34_03870;product=molybdate ABC transporter ATP-binding protein ModF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 821365 822153 . - . ID=gene-PUW34_03875;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=PUW34_03875 CP118122.1 Protein Homology CDS 821365 822153 . - 0 ID=cds-WJG97664.1;Parent=gene-PUW34_03875;Dbxref=NCBI_GP:WJG97664.1;Name=WJG97664.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=PUW34_03875;product=molybdenum-dependent transcriptional regulator;protein_id=WJG97664.1;transl_table=11 CP118122.1 Genbank gene 822282 822431 . + . ID=gene-PUW34_03880;Name=PUW34_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03880 CP118122.1 Protein Homology CDS 822282 822431 . + 0 ID=cds-WJG97665.1;Parent=gene-PUW34_03880;Dbxref=NCBI_GP:WJG97665.1;Name=WJG97665.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=PUW34_03880;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WJG97665.1;transl_table=11 CP118122.1 Genbank gene 822598 823371 . + . ID=gene-PUW34_03885;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=PUW34_03885 CP118122.1 Protein Homology CDS 822598 823371 . + 0 ID=cds-WJG97666.1;Parent=gene-PUW34_03885;Dbxref=NCBI_GP:WJG97666.1;Name=WJG97666.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=PUW34_03885;product=molybdate ABC transporter substrate-binding protein;protein_id=WJG97666.1;transl_table=11 CP118122.1 Genbank gene 823371 824060 . + . ID=gene-PUW34_03890;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=PUW34_03890 CP118122.1 Protein Homology CDS 823371 824060 . + 0 ID=cds-WJG97667.1;Parent=gene-PUW34_03890;Dbxref=NCBI_GP:WJG97667.1;Name=WJG97667.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=PUW34_03890;product=molybdate ABC transporter permease subunit;protein_id=WJG97667.1;transl_table=11 CP118122.1 Genbank gene 824063 825121 . + . ID=gene-PUW34_03895;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=PUW34_03895 CP118122.1 Protein Homology CDS 824063 825121 . + 0 ID=cds-WJG97668.1;Parent=gene-PUW34_03895;Dbxref=NCBI_GP:WJG97668.1;Name=WJG97668.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=PUW34_03895;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WJG97668.1;transl_table=11 CP118122.1 Genbank gene 825122 825940 . - . ID=gene-PUW34_03900;Name=PUW34_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03900 CP118122.1 Protein Homology CDS 825122 825940 . - 0 ID=cds-WJG97669.1;Parent=gene-PUW34_03900;Dbxref=NCBI_GP:WJG97669.1;Name=WJG97669.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=PUW34_03900;product=pyridoxal phosphatase;protein_id=WJG97669.1;transl_table=11 CP118122.1 Genbank gene 826104 827099 . + . ID=gene-PUW34_03905;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=PUW34_03905 CP118122.1 Protein Homology CDS 826104 827099 . + 0 ID=cds-WJG97670.1;Parent=gene-PUW34_03905;Dbxref=NCBI_GP:WJG97670.1;Name=WJG97670.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=PUW34_03905;product=6-phosphogluconolactonase;protein_id=WJG97670.1;transl_table=11 CP118122.1 Genbank gene 827243 828559 . - . ID=gene-PUW34_03910;Name=PUW34_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03910 CP118122.1 Protein Homology CDS 827243 828559 . - 0 ID=cds-WJG97671.1;Parent=gene-PUW34_03910;Dbxref=NCBI_GP:WJG97671.1;Name=WJG97671.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=PUW34_03910;product=putative acyl-CoA thioester hydrolase;protein_id=WJG97671.1;transl_table=11 CP118122.1 Genbank pseudogene 828797 830019 . + . ID=gene-PUW34_03915;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=pseudogene;locus_tag=PUW34_03915;pseudo=true CP118122.1 Protein Homology CDS 828797 830019 . + 0 ID=cds-PUW34_03915;Parent=gene-PUW34_03915;Note=frameshifted;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=PUW34_03915;product=imidazolonepropionase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 830016 830957 . + . ID=gene-PUW34_03920;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=PUW34_03920 CP118122.1 Protein Homology CDS 830016 830957 . + 0 ID=cds-WJG97672.1;Parent=gene-PUW34_03920;Dbxref=NCBI_GP:WJG97672.1;Name=WJG97672.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=PUW34_03920;product=formimidoylglutamase;protein_id=WJG97672.1;transl_table=11 CP118122.1 Genbank gene 831002 831727 . + . ID=gene-PUW34_03925;Name=PUW34_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03925 CP118122.1 Protein Homology CDS 831002 831727 . + 0 ID=cds-WJG97673.1;Parent=gene-PUW34_03925;Dbxref=NCBI_GP:WJG97673.1;Name=WJG97673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=PUW34_03925;product=histidine utilization repressor;protein_id=WJG97673.1;transl_table=11 CP118122.1 Genbank gene 831924 833609 . + . ID=gene-PUW34_03930;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=PUW34_03930 CP118122.1 Protein Homology CDS 831924 833609 . + 0 ID=cds-WJG97674.1;Parent=gene-PUW34_03930;Dbxref=NCBI_GP:WJG97674.1;Name=WJG97674.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=PUW34_03930;product=urocanate hydratase;protein_id=WJG97674.1;transl_table=11 CP118122.1 Genbank gene 833611 835131 . + . ID=gene-PUW34_03935;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=PUW34_03935 CP118122.1 Protein Homology CDS 833611 835131 . + 0 ID=cds-WJG97675.1;Parent=gene-PUW34_03935;Dbxref=NCBI_GP:WJG97675.1;Name=WJG97675.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=PUW34_03935;product=histidine ammonia-lyase;protein_id=WJG97675.1;transl_table=11 CP118122.1 Genbank gene 835216 835692 . - . ID=gene-PUW34_03940;Name=PUW34_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03940 CP118122.1 Protein Homology CDS 835216 835692 . - 0 ID=cds-WJG97676.1;Parent=gene-PUW34_03940;Dbxref=NCBI_GP:WJG97676.1;Name=WJG97676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=PUW34_03940;product=kinase inhibitor;protein_id=WJG97676.1;transl_table=11 CP118122.1 Genbank gene 835750 837039 . - . ID=gene-PUW34_03945;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=PUW34_03945 CP118122.1 Protein Homology CDS 835750 837039 . - 0 ID=cds-WJG97677.1;Parent=gene-PUW34_03945;Dbxref=NCBI_GP:WJG97677.1;Name=WJG97677.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=PUW34_03945;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WJG97677.1;transl_table=11 CP118122.1 Genbank gene 837126 838166 . + . ID=gene-PUW34_03950;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=PUW34_03950 CP118122.1 Protein Homology CDS 837126 838166 . + 0 ID=cds-WJG97678.1;Parent=gene-PUW34_03950;Dbxref=NCBI_GP:WJG97678.1;Name=WJG97678.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=PUW34_03950;product=biotin synthase BioB;protein_id=WJG97678.1;transl_table=11 CP118122.1 Genbank gene 838163 839320 . + . ID=gene-PUW34_03955;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=PUW34_03955 CP118122.1 Protein Homology CDS 838163 839320 . + 0 ID=cds-WJG97679.1;Parent=gene-PUW34_03955;Dbxref=NCBI_GP:WJG97679.1;Name=WJG97679.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=PUW34_03955;product=8-amino-7-oxononanoate synthase;protein_id=WJG97679.1;transl_table=11 CP118122.1 Genbank gene 839304 840059 . + . ID=gene-PUW34_03960;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=PUW34_03960 CP118122.1 Protein Homology CDS 839304 840059 . + 0 ID=cds-WJG97680.1;Parent=gene-PUW34_03960;Dbxref=NCBI_GP:WJG97680.1;Name=WJG97680.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=PUW34_03960;product=malonyl-ACP O-methyltransferase BioC;protein_id=WJG97680.1;transl_table=11 CP118122.1 Genbank gene 840052 840738 . + . ID=gene-PUW34_03965;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PUW34_03965 CP118122.1 Protein Homology CDS 840052 840738 . + 0 ID=cds-WJG97681.1;Parent=gene-PUW34_03965;Dbxref=NCBI_GP:WJG97681.1;Name=WJG97681.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=PUW34_03965;product=dethiobiotin synthase;protein_id=WJG97681.1;transl_table=11 CP118122.1 Genbank gene 841388 843409 . + . ID=gene-PUW34_03970;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=PUW34_03970 CP118122.1 Protein Homology CDS 841388 843409 . + 0 ID=cds-WJG97682.1;Parent=gene-PUW34_03970;Dbxref=NCBI_GP:WJG97682.1;Name=WJG97682.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=PUW34_03970;product=excinuclease ABC subunit UvrB;protein_id=WJG97682.1;transl_table=11 CP118122.1 Genbank gene 843718 843891 . + . ID=gene-PUW34_03975;Name=PUW34_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_03975 CP118122.1 Protein Homology CDS 843718 843891 . + 0 ID=cds-WJG97683.1;Parent=gene-PUW34_03975;Dbxref=NCBI_GP:WJG97683.1;Name=WJG97683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=PUW34_03975;product=hypothetical protein;protein_id=WJG97683.1;transl_table=11 CP118122.1 Genbank pseudogene 843899 846167 . + . ID=gene-PUW34_03980;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=pseudogene;locus_tag=PUW34_03980;pseudo=true CP118122.1 Protein Homology CDS 843899 846167 . + 0 ID=cds-PUW34_03980;Parent=gene-PUW34_03980;Note=frameshifted;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=PUW34_03980;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;pseudo=true;transl_table=11 CP118122.1 Genbank gene 846259 847167 . - . ID=gene-PUW34_03985;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=PUW34_03985 CP118122.1 Protein Homology CDS 846259 847167 . - 0 ID=cds-WJG97684.1;Parent=gene-PUW34_03985;Dbxref=NCBI_GP:WJG97684.1;Name=WJG97684.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=PUW34_03985;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WJG97684.1;transl_table=11 CP118122.1 cmsearch riboswitch 847432 847576 . + . ID=id-CP118122.1:847432..847576;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118122.1 Genbank gene 847564 848553 . + . ID=gene-PUW34_03990;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=PUW34_03990 CP118122.1 Protein Homology CDS 847564 848553 . + 0 ID=cds-WJG97685.1;Parent=gene-PUW34_03990;Dbxref=NCBI_GP:WJG97685.1;Name=WJG97685.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=PUW34_03990;product=GTP 3'%2C8-cyclase MoaA;protein_id=WJG97685.1;transl_table=11 CP118122.1 Genbank gene 848575 849087 . + . ID=gene-PUW34_03995;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=PUW34_03995 CP118122.1 Protein Homology CDS 848575 849087 . + 0 ID=cds-WJG97686.1;Parent=gene-PUW34_03995;Dbxref=NCBI_GP:WJG97686.1;Name=WJG97686.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=PUW34_03995;product=molybdenum cofactor biosynthesis protein B;protein_id=WJG97686.1;transl_table=11 CP118122.1 Genbank gene 849090 849575 . + . ID=gene-PUW34_04000;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=PUW34_04000 CP118122.1 Protein Homology CDS 849090 849575 . + 0 ID=cds-WJG97687.1;Parent=gene-PUW34_04000;Dbxref=NCBI_GP:WJG97687.1;Name=WJG97687.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=PUW34_04000;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WJG97687.1;transl_table=11 CP118122.1 Genbank gene 849568 849813 . + . ID=gene-PUW34_04005;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=PUW34_04005 CP118122.1 Protein Homology CDS 849568 849813 . + 0 ID=cds-WJG97688.1;Parent=gene-PUW34_04005;Dbxref=NCBI_GP:WJG97688.1;Name=WJG97688.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=PUW34_04005;product=molybdopterin synthase sulfur carrier subunit;protein_id=WJG97688.1;transl_table=11 CP118122.1 Genbank gene 849815 850267 . + . ID=gene-PUW34_04010;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=PUW34_04010 CP118122.1 Protein Homology CDS 849815 850267 . + 0 ID=cds-WJG97689.1;Parent=gene-PUW34_04010;Dbxref=NCBI_GP:WJG97689.1;Name=WJG97689.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=PUW34_04010;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WJG97689.1;transl_table=11 CP118122.1 Genbank gene 850315 851019 . + . ID=gene-PUW34_04015;Name=PUW34_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04015 CP118122.1 Protein Homology CDS 850315 851019 . + 0 ID=cds-WJG97690.1;Parent=gene-PUW34_04015;Dbxref=NCBI_GP:WJG97690.1;Name=WJG97690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=PUW34_04015;product=Bax inhibitor-1/YccA family protein;protein_id=WJG97690.1;transl_table=11 CP118122.1 Genbank gene 851164 851871 . + . ID=gene-PUW34_04020;Name=PUW34_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04020 CP118122.1 Protein Homology CDS 851164 851871 . + 0 ID=cds-WJG97691.1;Parent=gene-PUW34_04020;Dbxref=NCBI_GP:WJG97691.1;Name=WJG97691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=PUW34_04020;product=Bax inhibitor-1 family protein;protein_id=WJG97691.1;transl_table=11 CP118122.1 Genbank gene 851895 852503 . + . ID=gene-PUW34_04025;Name=PUW34_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04025 CP118122.1 Protein Homology CDS 851895 852503 . + 0 ID=cds-WJG98913.1;Parent=gene-PUW34_04025;Dbxref=NCBI_GP:WJG98913.1;Name=WJG98913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=PUW34_04025;product=hypothetical protein;protein_id=WJG98913.1;transl_table=11 CP118122.1 Genbank gene 852511 853071 . + . ID=gene-PUW34_04030;Name=PUW34_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04030 CP118122.1 Protein Homology CDS 852511 853071 . + 0 ID=cds-WJG97692.1;Parent=gene-PUW34_04030;Dbxref=NCBI_GP:WJG97692.1;Name=WJG97692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=PUW34_04030;product=hypothetical protein;protein_id=WJG97692.1;transl_table=11 CP118122.1 Genbank gene 853074 854036 . - . ID=gene-PUW34_04035;Name=PUW34_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04035 CP118122.1 Protein Homology CDS 853074 854036 . - 0 ID=cds-WJG97693.1;Parent=gene-PUW34_04035;Dbxref=NCBI_GP:WJG97693.1;Name=WJG97693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=PUW34_04035;product=YbhN family protein;protein_id=WJG97693.1;transl_table=11 CP118122.1 Genbank gene 854036 855277 . - . ID=gene-PUW34_04040;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=PUW34_04040 CP118122.1 Protein Homology CDS 854036 855277 . - 0 ID=cds-WJG97694.1;Parent=gene-PUW34_04040;Dbxref=NCBI_GP:WJG97694.1;Name=WJG97694.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=PUW34_04040;product=cardiolipin synthase ClsB;protein_id=WJG97694.1;transl_table=11 CP118122.1 Genbank gene 855274 856032 . - . ID=gene-PUW34_04045;Name=PUW34_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04045 CP118122.1 Protein Homology CDS 855274 856032 . - 0 ID=cds-WJG97695.1;Parent=gene-PUW34_04045;Dbxref=NCBI_GP:WJG97695.1;Name=WJG97695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=PUW34_04045;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WJG97695.1;transl_table=11 CP118122.1 Genbank gene 856165 856575 . + . ID=gene-PUW34_04050;Name=PUW34_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04050 CP118122.1 Protein Homology CDS 856165 856575 . + 0 ID=cds-WJG97696.1;Parent=gene-PUW34_04050;Dbxref=NCBI_GP:WJG97696.1;Name=WJG97696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=PUW34_04050;product=YbhQ family protein;protein_id=WJG97696.1;transl_table=11 CP118122.1 Genbank gene 856537 857643 . - . ID=gene-PUW34_04055;Name=PUW34_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04055 CP118122.1 Protein Homology CDS 856537 857643 . - 0 ID=cds-WJG97697.1;Parent=gene-PUW34_04055;Dbxref=NCBI_GP:WJG97697.1;Name=WJG97697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=PUW34_04055;product=ABC transporter permease;protein_id=WJG97697.1;transl_table=11 CP118122.1 Genbank gene 857759 858889 . - . ID=gene-PUW34_04060;Name=PUW34_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04060 CP118122.1 Protein Homology CDS 857759 858889 . - 0 ID=cds-WJG97698.1;Parent=gene-PUW34_04060;Dbxref=NCBI_GP:WJG97698.1;Name=WJG97698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=PUW34_04060;product=ABC transporter permease;protein_id=WJG97698.1;transl_table=11 CP118122.1 Genbank gene 858882 860618 . - . ID=gene-PUW34_04065;Name=PUW34_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04065 CP118122.1 Protein Homology CDS 858882 860618 . - 0 ID=cds-WJG97699.1;Parent=gene-PUW34_04065;Dbxref=NCBI_GP:WJG97699.1;Name=WJG97699.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=PUW34_04065;product=ATP-binding cassette domain-containing protein;protein_id=WJG97699.1;transl_table=11 CP118122.1 Genbank pseudogene 860611 861605 . - . ID=gene-PUW34_04070;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=pseudogene;locus_tag=PUW34_04070;pseudo=true CP118122.1 Protein Homology CDS 860611 861605 . - 0 ID=cds-PUW34_04070;Parent=gene-PUW34_04070;Note=frameshifted;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=PUW34_04070;product=secretion protein HlyD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 861605 862279 . - . ID=gene-PUW34_04075;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=PUW34_04075 CP118122.1 Protein Homology CDS 861605 862279 . - 0 ID=cds-WJG97700.1;Parent=gene-PUW34_04075;Dbxref=NCBI_GP:WJG97700.1;Name=WJG97700.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=PUW34_04075;product=transcriptional regulator CecR;protein_id=WJG97700.1;transl_table=11 CP118122.1 Genbank gene 862508 863869 . + . ID=gene-PUW34_04080;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=PUW34_04080 CP118122.1 Protein Homology CDS 862508 863869 . + 0 ID=cds-WJG97701.1;Parent=gene-PUW34_04080;Dbxref=NCBI_GP:WJG97701.1;Name=WJG97701.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=PUW34_04080;product=ATP-dependent RNA helicase RhlE;protein_id=WJG97701.1;transl_table=11 CP118122.1 Genbank pseudogene 864077 866221 . + . ID=gene-PUW34_04085;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=pseudogene;locus_tag=PUW34_04085;pseudo=true CP118122.1 Protein Homology CDS 864077 866221 . + 0 ID=cds-PUW34_04085;Parent=gene-PUW34_04085;Note=internal stop;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=PUW34_04085;product=ATP-dependent DNA helicase DinG;pseudo=true;transl_table=11 CP118122.1 Genbank gene 866251 867225 . + . ID=gene-PUW34_04090;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=PUW34_04090 CP118122.1 Protein Homology CDS 866251 867225 . + 0 ID=cds-WJG97702.1;Parent=gene-PUW34_04090;Dbxref=NCBI_GP:WJG97702.1;Name=WJG97702.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=PUW34_04090;product=DNA-binding protein YbiB;protein_id=WJG97702.1;transl_table=11 CP118122.1 Genbank gene 867381 867641 . - . ID=gene-PUW34_04095;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=PUW34_04095 CP118122.1 Protein Homology CDS 867381 867641 . - 0 ID=cds-WJG97703.1;Parent=gene-PUW34_04095;Dbxref=NCBI_GP:WJG97703.1;Name=WJG97703.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=PUW34_04095;product=DUF1471 family protein YbiJ;protein_id=WJG97703.1;transl_table=11 CP118122.1 Genbank gene 867926 868192 . - . ID=gene-PUW34_04100;Name=PUW34_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04100 CP118122.1 Protein Homology CDS 867926 868192 . - 0 ID=cds-WJG97704.1;Parent=gene-PUW34_04100;Dbxref=NCBI_GP:WJG97704.1;Name=WJG97704.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=PUW34_04100;product=DksA/TraR family C4-type zinc finger protein;protein_id=WJG97704.1;transl_table=11 CP118122.1 Genbank pseudogene 868397 869322 . + . ID=gene-PUW34_04105;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=pseudogene;locus_tag=PUW34_04105;pseudo=true CP118122.1 Protein Homology CDS 868397 869322 . + 0 ID=cds-PUW34_04105;Parent=gene-PUW34_04105;Note=frameshifted;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=PUW34_04105;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 869319 871541 . - . ID=gene-PUW34_04110;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=PUW34_04110 CP118122.1 Protein Homology CDS 869319 871541 . - 0 ID=cds-WJG97705.1;Parent=gene-PUW34_04110;Dbxref=NCBI_GP:WJG97705.1;Name=WJG97705.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=PUW34_04110;product=mechanosensitive channel protein;protein_id=WJG97705.1;transl_table=11 CP118122.1 Genbank gene 871660 872382 . - . ID=gene-PUW34_04115;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=PUW34_04115 CP118122.1 Protein Homology CDS 871660 872382 . - 0 ID=cds-WJG97706.1;Parent=gene-PUW34_04115;Dbxref=NCBI_GP:WJG97706.1;Name=WJG97706.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=PUW34_04115;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WJG97706.1;transl_table=11 CP118122.1 Genbank gene 872379 873038 . - . ID=gene-PUW34_04120;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=PUW34_04120 CP118122.1 Protein Homology CDS 872379 873038 . - 0 ID=cds-WJG97707.1;Parent=gene-PUW34_04120;Dbxref=NCBI_GP:WJG97707.1;Name=WJG97707.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=PUW34_04120;product=glutamine ABC transporter permease GlnP;protein_id=WJG97707.1;transl_table=11 CP118122.1 Genbank pseudogene 873182 873927 . - . ID=gene-PUW34_04125;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=pseudogene;locus_tag=PUW34_04125;pseudo=true CP118122.1 Protein Homology CDS 873182 873927 . - 0 ID=cds-PUW34_04125;Parent=gene-PUW34_04125;Note=frameshifted;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=PUW34_04125;product=glutamine ABC transporter substrate-binding protein GlnH;pseudo=true;transl_table=11 CP118122.1 Genbank gene 874404 874907 . - . ID=gene-PUW34_04130;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=PUW34_04130 CP118122.1 Protein Homology CDS 874404 874907 . - 0 ID=cds-WJG97708.1;Parent=gene-PUW34_04130;Dbxref=NCBI_GP:WJG97708.1;Name=WJG97708.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=PUW34_04130;product=DNA starvation/stationary phase protection protein Dps;protein_id=WJG97708.1;transl_table=11 CP118122.1 Genbank pseudogene 875210 876096 . - . ID=gene-PUW34_04135;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=pseudogene;locus_tag=PUW34_04135;pseudo=true CP118122.1 Protein Homology CDS 875210 876096 . - 0 ID=cds-PUW34_04135;Parent=gene-PUW34_04135;Note=frameshifted;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=PUW34_04135;product=threonine/homoserine exporter RhtA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 876450 876965 . + . ID=gene-PUW34_04140;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=PUW34_04140 CP118122.1 Protein Homology CDS 876450 876965 . + 0 ID=cds-WJG97709.1;Parent=gene-PUW34_04140;Dbxref=NCBI_GP:WJG97709.1;Name=WJG97709.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=PUW34_04140;product=outer membrane protein OmpX;protein_id=WJG97709.1;transl_table=11 CP118122.1 Genbank gene 877028 878608 . - . ID=gene-PUW34_04145;Name=PUW34_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04145 CP118122.1 Protein Homology CDS 877028 878608 . - 0 ID=cds-WJG97710.1;Parent=gene-PUW34_04145;Dbxref=NCBI_GP:WJG97710.1;Name=WJG97710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=PUW34_04145;product=phosphoethanolamine transferase;protein_id=WJG97710.1;transl_table=11 CP118122.1 Genbank gene 878873 879001 . - . ID=gene-PUW34_04150;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=PUW34_04150 CP118122.1 Protein Homology CDS 878873 879001 . - 0 ID=cds-WJG97711.1;Parent=gene-PUW34_04150;Dbxref=NCBI_GP:WJG97711.1;Name=WJG97711.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=PUW34_04150;product=manganase accumulation protein MntS;protein_id=WJG97711.1;transl_table=11 CP118122.1 Genbank gene 879187 879660 . + . ID=gene-PUW34_04155;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=PUW34_04155 CP118122.1 Protein Homology CDS 879187 879660 . + 0 ID=cds-WJG97712.1;Parent=gene-PUW34_04155;Dbxref=NCBI_GP:WJG97712.1;Name=WJG97712.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=PUW34_04155;product=manganese-binding transcriptional regulator MntR;protein_id=WJG97712.1;transl_table=11 CP118122.1 Genbank pseudogene 879657 880768 . + . ID=gene-PUW34_04160;Name=PUW34_04160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04160;pseudo=true CP118122.1 Protein Homology CDS 879657 880768 . + 0 ID=cds-PUW34_04160;Parent=gene-PUW34_04160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=PUW34_04160;product=anion transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 880812 881732 . - . ID=gene-PUW34_04165;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=PUW34_04165 CP118122.1 Protein Homology CDS 880812 881732 . - 0 ID=cds-WJG97713.1;Parent=gene-PUW34_04165;Dbxref=NCBI_GP:WJG97713.1;Name=WJG97713.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=PUW34_04165;product=L%2CD-transpeptidase;protein_id=WJG97713.1;transl_table=11 CP118122.1 Genbank gene 881951 883543 . + . ID=gene-PUW34_04170;Name=PUW34_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04170 CP118122.1 Protein Homology CDS 881951 883543 . + 0 ID=cds-WJG97714.1;Parent=gene-PUW34_04170;Dbxref=NCBI_GP:WJG97714.1;Name=WJG97714.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=PUW34_04170;product=ABC-F family ATPase;protein_id=WJG97714.1;transl_table=11 CP118122.1 Genbank pseudogene 883943 884685 . + . ID=gene-PUW34_04175;Name=PUW34_04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04175;pseudo=true CP118122.1 Protein Homology CDS 883943 884685 . + 0 ID=cds-PUW34_04175;Parent=gene-PUW34_04175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=PUW34_04175;product=DUF4261 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 884714 885442 . - . ID=gene-PUW34_04180;Name=PUW34_04180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04180;pseudo=true CP118122.1 Protein Homology CDS 884714 885442 . - 0 ID=cds-PUW34_04180;Parent=gene-PUW34_04180;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=PUW34_04180;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 885638 886903 . - . ID=gene-PUW34_04185;Name=PUW34_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04185 CP118122.1 Protein Homology CDS 885638 886903 . - 0 ID=cds-WJG97715.1;Parent=gene-PUW34_04185;Dbxref=NCBI_GP:WJG97715.1;Name=WJG97715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=PUW34_04185;product=DUF1479 domain-containing protein;protein_id=WJG97715.1;transl_table=11 CP118122.1 Genbank gene 887165 887974 . + . ID=gene-PUW34_04190;Name=PUW34_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04190 CP118122.1 Protein Homology CDS 887165 887974 . + 0 ID=cds-WJG97716.1;Parent=gene-PUW34_04190;Dbxref=NCBI_GP:WJG97716.1;Name=WJG97716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=PUW34_04190;product=Cof-type HAD-IIB family hydrolase;protein_id=WJG97716.1;transl_table=11 CP118122.1 Genbank pseudogene 888052 890483 . - . ID=gene-PUW34_04195;Name=PUW34_04195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04195;pseudo=true CP118122.1 Protein Homology CDS 888052 890483 . - 0 ID=cds-PUW34_04195;Parent=gene-PUW34_04195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=PUW34_04195;product=glycyl radical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 890489 891388 . - . ID=gene-PUW34_04200;Name=PUW34_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04200 CP118122.1 Protein Homology CDS 890489 891388 . - 0 ID=cds-WJG97717.1;Parent=gene-PUW34_04200;Dbxref=NCBI_GP:WJG97717.1;Name=WJG97717.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=PUW34_04200;product=glycyl-radical enzyme activating protein;protein_id=WJG97717.1;transl_table=11 CP118122.1 Genbank gene 891666 892415 . - . ID=gene-PUW34_04205;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=PUW34_04205 CP118122.1 Protein Homology CDS 891666 892415 . - 0 ID=cds-WJG97718.1;Parent=gene-PUW34_04205;Dbxref=NCBI_GP:WJG97718.1;Name=WJG97718.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=PUW34_04205;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WJG97718.1;transl_table=11 CP118122.1 Genbank gene 892415 893650 . - . ID=gene-PUW34_04210;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=PUW34_04210 CP118122.1 Protein Homology CDS 892415 893650 . - 0 ID=cds-WJG97719.1;Parent=gene-PUW34_04210;Dbxref=NCBI_GP:WJG97719.1;Name=WJG97719.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=PUW34_04210;product=molybdopterin molybdotransferase MoeA;protein_id=WJG97719.1;transl_table=11 CP118122.1 Genbank gene 893853 894794 . + . ID=gene-PUW34_04215;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=PUW34_04215 CP118122.1 Protein Homology CDS 893853 894794 . + 0 ID=cds-WJG97720.1;Parent=gene-PUW34_04215;Dbxref=NCBI_GP:WJG97720.1;Name=WJG97720.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=PUW34_04215;product=beta-aspartyl-peptidase;protein_id=WJG97720.1;transl_table=11 CP118122.1 Genbank gene 894805 896676 . + . ID=gene-PUW34_04220;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=PUW34_04220 CP118122.1 Protein Homology CDS 894805 896676 . + 0 ID=cds-WJG97721.1;Parent=gene-PUW34_04220;Dbxref=NCBI_GP:WJG97721.1;Name=WJG97721.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=PUW34_04220;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WJG97721.1;transl_table=11 CP118122.1 Genbank pseudogene 896709 898246 . + . ID=gene-PUW34_04225;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=pseudogene;locus_tag=PUW34_04225;pseudo=true CP118122.1 Protein Homology CDS 896709 898246 . + 0 ID=cds-PUW34_04225;Parent=gene-PUW34_04225;Note=frameshifted;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=PUW34_04225;product=glutathione ABC transporter substrate-binding protein GsiB;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 898307 899226 . + . ID=gene-PUW34_04230;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=pseudogene;locus_tag=PUW34_04230;pseudo=true CP118122.1 Protein Homology CDS 898307 899226 . + 0 ID=cds-PUW34_04230;Parent=gene-PUW34_04230;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=PUW34_04230;product=glutathione ABC transporter permease GsiC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 899229 900140 . + . ID=gene-PUW34_04235;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=PUW34_04235 CP118122.1 Protein Homology CDS 899229 900140 . + 0 ID=cds-WJG97722.1;Parent=gene-PUW34_04235;Dbxref=NCBI_GP:WJG97722.1;Name=WJG97722.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=PUW34_04235;product=glutathione ABC transporter permease GsiD;protein_id=WJG97722.1;transl_table=11 CP118122.1 Genbank gene 900231 901556 . - . ID=gene-PUW34_04240;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=PUW34_04240 CP118122.1 Protein Homology CDS 900231 901556 . - 0 ID=cds-WJG97723.1;Parent=gene-PUW34_04240;Dbxref=NCBI_GP:WJG97723.1;Name=WJG97723.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=PUW34_04240;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WJG97723.1;transl_table=11 CP118122.1 Genbank gene 901787 902170 . + . ID=gene-PUW34_04245;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=PUW34_04245 CP118122.1 Protein Homology CDS 901787 902170 . + 0 ID=cds-WJG97724.1;Parent=gene-PUW34_04245;Dbxref=NCBI_GP:WJG97724.1;Name=WJG97724.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=PUW34_04245;product=biofilm formation regulator BssR;protein_id=WJG97724.1;transl_table=11 CP118122.1 Genbank pseudogene 902272 902518 . + . ID=gene-PUW34_04250;Name=PUW34_04250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04250;pseudo=true CP118122.1 Protein Homology CDS 902272 902518 . + 0 ID=cds-PUW34_04250;Parent=gene-PUW34_04250;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=PUW34_04250;product=IS4 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 902883 903398 . + . ID=gene-PUW34_04255;Name=PUW34_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04255 CP118122.1 Protein Homology CDS 902883 903398 . + 0 ID=cds-WJG97725.1;Parent=gene-PUW34_04255;Dbxref=NCBI_GP:WJG97725.1;Name=WJG97725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=PUW34_04255;product=CoA ester lyase;protein_id=WJG97725.1;transl_table=11 CP118122.1 Genbank gene 903316 904170 . + . ID=gene-PUW34_04260;Name=PUW34_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04260 CP118122.1 Protein Homology CDS 903316 904170 . + 0 ID=cds-WJG97726.1;Parent=gene-PUW34_04260;Dbxref=NCBI_GP:WJG97726.1;Name=WJG97726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459832.3;locus_tag=PUW34_04260;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WJG97726.1;transl_table=11 CP118122.1 Genbank gene 904181 905134 . + . ID=gene-PUW34_04265;Name=PUW34_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04265 CP118122.1 Protein Homology CDS 904181 905134 . + 0 ID=cds-WJG97727.1;Parent=gene-PUW34_04265;Dbxref=NCBI_GP:WJG97727.1;Name=WJG97727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=PUW34_04265;product=FAD-binding protein;protein_id=WJG97727.1;transl_table=11 CP118122.1 Genbank gene 905167 905364 . + . ID=gene-PUW34_04270;Name=PUW34_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04270 CP118122.1 GeneMarkS-2+ CDS 905167 905364 . + 0 ID=cds-WJG97728.1;Parent=gene-PUW34_04270;Dbxref=NCBI_GP:WJG97728.1;Name=WJG97728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_04270;product=hypothetical protein;protein_id=WJG97728.1;transl_table=11 CP118122.1 Genbank gene 905428 906591 . + . ID=gene-PUW34_04275;Name=PUW34_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04275 CP118122.1 Protein Homology CDS 905428 906591 . + 0 ID=cds-WJG97729.1;Parent=gene-PUW34_04275;Dbxref=NCBI_GP:WJG97729.1;Name=WJG97729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=PUW34_04275;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WJG97729.1;transl_table=11 CP118122.1 Genbank gene 907040 908725 . + . ID=gene-PUW34_04280;Name=PUW34_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04280 CP118122.1 Protein Homology CDS 907040 908725 . + 0 ID=cds-WJG97730.1;Parent=gene-PUW34_04280;Dbxref=NCBI_GP:WJG97730.1;Name=WJG97730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=PUW34_04280;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WJG97730.1;transl_table=11 CP118122.1 Genbank gene 908731 909621 . - . ID=gene-PUW34_04285;Name=PUW34_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04285 CP118122.1 Protein Homology CDS 908731 909621 . - 0 ID=cds-WJG97731.1;Parent=gene-PUW34_04285;Dbxref=NCBI_GP:WJG97731.1;Name=WJG97731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=PUW34_04285;product=LysR family transcriptional regulator;protein_id=WJG97731.1;transl_table=11 CP118122.1 Genbank gene 909883 910308 . - . ID=gene-PUW34_04290;Name=PUW34_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04290 CP118122.1 Protein Homology CDS 909883 910308 . - 0 ID=cds-WJG97732.1;Parent=gene-PUW34_04290;Dbxref=NCBI_GP:WJG97732.1;Name=WJG97732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=PUW34_04290;product=GntP family permease;protein_id=WJG97732.1;transl_table=11 CP118122.1 Genbank gene 910655 911152 . + . ID=gene-PUW34_04295;Name=PUW34_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04295 CP118122.1 Protein Homology CDS 910655 911152 . + 0 ID=cds-WJG98914.1;Parent=gene-PUW34_04295;Dbxref=NCBI_GP:WJG98914.1;Name=WJG98914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=PUW34_04295;product=PQQ-dependent sugar dehydrogenase;protein_id=WJG98914.1;transl_table=11 CP118122.1 Genbank gene 911173 911334 . + . ID=gene-PUW34_04300;Name=PUW34_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04300 CP118122.1 Protein Homology CDS 911173 911334 . + 0 ID=cds-WJG98915.1;Parent=gene-PUW34_04300;Dbxref=NCBI_GP:WJG98915.1;Name=WJG98915.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019607.2;locus_tag=PUW34_04300;product=PQQ-dependent sugar dehydrogenase;protein_id=WJG98915.1;transl_table=11 CP118122.1 Genbank gene 911331 911957 . - . ID=gene-PUW34_04305;Name=PUW34_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04305 CP118122.1 Protein Homology CDS 911331 911957 . - 0 ID=cds-WJG97733.1;Parent=gene-PUW34_04305;Dbxref=NCBI_GP:WJG97733.1;Name=WJG97733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=PUW34_04305;product=glutathione S-transferase family protein;protein_id=WJG97733.1;transl_table=11 CP118122.1 Genbank gene 912201 913403 . + . ID=gene-PUW34_04310;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=PUW34_04310 CP118122.1 Protein Homology CDS 912201 913403 . + 0 ID=cds-WJG97734.1;Parent=gene-PUW34_04310;Dbxref=NCBI_GP:WJG97734.1;Name=WJG97734.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=PUW34_04310;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WJG97734.1;transl_table=11 CP118122.1 Genbank gene 913448 914206 . - . ID=gene-PUW34_04315;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=PUW34_04315 CP118122.1 Protein Homology CDS 913448 914206 . - 0 ID=cds-WJG97735.1;Parent=gene-PUW34_04315;Dbxref=NCBI_GP:WJG97735.1;Name=WJG97735.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=PUW34_04315;product=DNA-binding transcriptional repressor DeoR;protein_id=WJG97735.1;transl_table=11 CP118122.1 Genbank gene 914278 914886 . - . ID=gene-PUW34_04320;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=PUW34_04320 CP118122.1 Protein Homology CDS 914278 914886 . - 0 ID=cds-WJG98916.1;Parent=gene-PUW34_04320;Dbxref=NCBI_GP:WJG98916.1;Name=WJG98916.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=PUW34_04320;product=undecaprenyl-diphosphate phosphatase;protein_id=WJG98916.1;transl_table=11 CP118122.1 Genbank gene 915199 916431 . + . ID=gene-PUW34_04325;Name=PUW34_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04325 CP118122.1 Protein Homology CDS 915199 916431 . + 0 ID=cds-WJG97736.1;Parent=gene-PUW34_04325;Dbxref=NCBI_GP:WJG97736.1;Name=WJG97736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=PUW34_04325;product=MFS transporter;protein_id=WJG97736.1;transl_table=11 CP118122.1 Genbank gene 916484 917299 . - . ID=gene-PUW34_04330;Name=PUW34_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04330 CP118122.1 Protein Homology CDS 916484 917299 . - 0 ID=cds-WJG97737.1;Parent=gene-PUW34_04330;Dbxref=NCBI_GP:WJG97737.1;Name=WJG97737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=PUW34_04330;product=Cof-type HAD-IIB family hydrolase;protein_id=WJG97737.1;transl_table=11 CP118122.1 Genbank gene 917296 918507 . - . ID=gene-PUW34_04335;Name=PUW34_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04335 CP118122.1 Protein Homology CDS 917296 918507 . - 0 ID=cds-WJG97738.1;Parent=gene-PUW34_04335;Dbxref=NCBI_GP:WJG97738.1;Name=WJG97738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=PUW34_04335;product=MFS transporter;protein_id=WJG97738.1;transl_table=11 CP118122.1 Genbank gene 918666 919286 . + . ID=gene-PUW34_04340;Name=PUW34_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04340 CP118122.1 Protein Homology CDS 918666 919286 . + 0 ID=cds-WJG97739.1;Parent=gene-PUW34_04340;Dbxref=NCBI_GP:WJG97739.1;Name=WJG97739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=PUW34_04340;product=TetR/AcrR family transcriptional regulator;protein_id=WJG97739.1;transl_table=11 CP118122.1 Genbank gene 919403 921088 . - . ID=gene-PUW34_04345;Name=PUW34_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04345 CP118122.1 Protein Homology CDS 919403 921088 . - 0 ID=cds-WJG97740.1;Parent=gene-PUW34_04345;Dbxref=NCBI_GP:WJG97740.1;Name=WJG97740.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=PUW34_04345;product=aspartate:alanine antiporter;protein_id=WJG97740.1;transl_table=11 CP118122.1 Genbank gene 921359 921736 . + . ID=gene-PUW34_04350;Name=PUW34_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04350 CP118122.1 Protein Homology CDS 921359 921736 . + 0 ID=cds-WJG97741.1;Parent=gene-PUW34_04350;Dbxref=NCBI_GP:WJG97741.1;Name=WJG97741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=PUW34_04350;product=inner membrane protein YbjM;protein_id=WJG97741.1;transl_table=11 CP118122.1 Genbank gene 921768 922031 . - . ID=gene-PUW34_04355;Name=PUW34_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04355 CP118122.1 Protein Homology CDS 921768 922031 . - 0 ID=cds-WJG97742.1;Parent=gene-PUW34_04355;Dbxref=NCBI_GP:WJG97742.1;Name=WJG97742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=PUW34_04355;product=GrxA family glutaredoxin;protein_id=WJG97742.1;transl_table=11 CP118122.1 Genbank gene 922201 922491 . + . ID=gene-PUW34_04360;Name=PUW34_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04360 CP118122.1 Protein Homology CDS 922201 922491 . + 0 ID=cds-WJG97743.1;Parent=gene-PUW34_04360;Dbxref=NCBI_GP:WJG97743.1;Name=WJG97743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=PUW34_04360;product=YbjC family protein;protein_id=WJG97743.1;transl_table=11 CP118122.1 Genbank gene 922475 923197 . + . ID=gene-PUW34_04365;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=PUW34_04365 CP118122.1 Protein Homology CDS 922475 923197 . + 0 ID=cds-WJG97744.1;Parent=gene-PUW34_04365;Dbxref=NCBI_GP:WJG97744.1;Name=WJG97744.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=PUW34_04365;product=nitroreductase NfsA;protein_id=WJG97744.1;transl_table=11 CP118122.1 Genbank gene 923255 924157 . + . ID=gene-PUW34_04370;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=PUW34_04370 CP118122.1 Protein Homology CDS 923255 924157 . + 0 ID=cds-WJG97745.1;Parent=gene-PUW34_04370;Dbxref=NCBI_GP:WJG97745.1;Name=WJG97745.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=PUW34_04370;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WJG97745.1;transl_table=11 CP118122.1 Genbank gene 924254 924730 . + . ID=gene-PUW34_04375;Name=PUW34_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04375 CP118122.1 Protein Homology CDS 924254 924730 . + 0 ID=cds-WJG97746.1;Parent=gene-PUW34_04375;Dbxref=NCBI_GP:WJG97746.1;Name=WJG97746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=PUW34_04375;product=YbjN domain-containing protein;protein_id=WJG97746.1;transl_table=11 CP118122.1 Genbank gene 925079 926191 . + . ID=gene-PUW34_04380;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=PUW34_04380 CP118122.1 Protein Homology CDS 925079 926191 . + 0 ID=cds-WJG98917.1;Parent=gene-PUW34_04380;Dbxref=NCBI_GP:WJG98917.1;Name=WJG98917.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=PUW34_04380;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WJG98917.1;transl_table=11 CP118122.1 Genbank gene 926279 927412 . + . ID=gene-PUW34_04385;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=PUW34_04385 CP118122.1 Protein Homology CDS 926279 927412 . + 0 ID=cds-WJG97747.1;Parent=gene-PUW34_04385;Dbxref=NCBI_GP:WJG97747.1;Name=WJG97747.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=PUW34_04385;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WJG97747.1;transl_table=11 CP118122.1 Genbank gene 927422 928375 . + . ID=gene-PUW34_04390;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=PUW34_04390 CP118122.1 Protein Homology CDS 927422 928375 . + 0 ID=cds-WJG97748.1;Parent=gene-PUW34_04390;Dbxref=NCBI_GP:WJG97748.1;Name=WJG97748.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=PUW34_04390;product=putrescine ABC transporter permease PotH;protein_id=WJG97748.1;transl_table=11 CP118122.1 Genbank gene 928372 929223 . + . ID=gene-PUW34_04395;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=PUW34_04395 CP118122.1 Protein Homology CDS 928372 929223 . + 0 ID=cds-WJG97749.1;Parent=gene-PUW34_04395;Dbxref=NCBI_GP:WJG97749.1;Name=WJG97749.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=PUW34_04395;product=putrescine ABC transporter permease PotI;protein_id=WJG97749.1;transl_table=11 CP118122.1 Genbank gene 929297 929770 . + . ID=gene-PUW34_04400;Name=PUW34_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04400 CP118122.1 Protein Homology CDS 929297 929770 . + 0 ID=cds-WJG98918.1;Parent=gene-PUW34_04400;Dbxref=NCBI_GP:WJG98918.1;Name=WJG98918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=PUW34_04400;product=YbjO family protein;protein_id=WJG98918.1;transl_table=11 CP118122.1 Genbank gene 929861 930940 . + . ID=gene-PUW34_04405;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=PUW34_04405 CP118122.1 Protein Homology CDS 929861 930940 . + 0 ID=cds-WJG98919.1;Parent=gene-PUW34_04405;Dbxref=NCBI_GP:WJG98919.1;Name=WJG98919.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=PUW34_04405;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WJG98919.1;transl_table=11 CP118122.1 Genbank gene 931235 932578 . + . ID=gene-PUW34_04410;Name=PUW34_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04410 CP118122.1 Protein Homology CDS 931235 932578 . + 0 ID=cds-WJG97750.1;Parent=gene-PUW34_04410;Dbxref=NCBI_GP:WJG97750.1;Name=WJG97750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=PUW34_04410;product=PTS sugar transporter subunit IIC;protein_id=WJG97750.1;transl_table=11 CP118122.1 Genbank gene 932608 932928 . + . ID=gene-PUW34_04415;Name=PUW34_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04415 CP118122.1 Protein Homology CDS 932608 932928 . + 0 ID=cds-WJG97751.1;Parent=gene-PUW34_04415;Dbxref=NCBI_GP:WJG97751.1;Name=WJG97751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=PUW34_04415;product=PTS sugar transporter subunit IIB;protein_id=WJG97751.1;transl_table=11 CP118122.1 Genbank pseudogene 932938 934424 . + . ID=gene-PUW34_04420;Name=PUW34_04420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04420;pseudo=true CP118122.1 Protein Homology CDS 932938 934424 . + 0 ID=cds-PUW34_04420;Parent=gene-PUW34_04420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=PUW34_04420;product=sulfatase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 934643 935374 . - . ID=gene-PUW34_04425;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PUW34_04425 CP118122.1 Protein Homology CDS 934643 935374 . - 0 ID=cds-WJG97752.1;Parent=gene-PUW34_04425;Dbxref=NCBI_GP:WJG97752.1;Name=WJG97752.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=PUW34_04425;product=ABC transporter substrate-binding protein ArtJ;protein_id=WJG97752.1;transl_table=11 CP118122.1 Genbank gene 935611 936279 . - . ID=gene-PUW34_04430;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=PUW34_04430 CP118122.1 Protein Homology CDS 935611 936279 . - 0 ID=cds-WJG97753.1;Parent=gene-PUW34_04430;Dbxref=NCBI_GP:WJG97753.1;Name=WJG97753.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=PUW34_04430;product=arginine ABC transporter permease ArtM;protein_id=WJG97753.1;transl_table=11 CP118122.1 Genbank gene 936279 936995 . - . ID=gene-PUW34_04435;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=PUW34_04435 CP118122.1 Protein Homology CDS 936279 936995 . - 0 ID=cds-WJG97754.1;Parent=gene-PUW34_04435;Dbxref=NCBI_GP:WJG97754.1;Name=WJG97754.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=PUW34_04435;product=arginine ABC transporter permease ArtQ;protein_id=WJG97754.1;transl_table=11 CP118122.1 Genbank gene 937002 937733 . - . ID=gene-PUW34_04440;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PUW34_04440 CP118122.1 Protein Homology CDS 937002 937733 . - 0 ID=cds-WJG97755.1;Parent=gene-PUW34_04440;Dbxref=NCBI_GP:WJG97755.1;Name=WJG97755.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=PUW34_04440;product=arginine ABC transporter substrate-binding protein;protein_id=WJG97755.1;transl_table=11 CP118122.1 Genbank gene 937751 938479 . - . ID=gene-PUW34_04445;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=PUW34_04445 CP118122.1 Protein Homology CDS 937751 938479 . - 0 ID=cds-WJG97756.1;Parent=gene-PUW34_04445;Dbxref=NCBI_GP:WJG97756.1;Name=WJG97756.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=PUW34_04445;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WJG97756.1;transl_table=11 CP118122.1 Genbank gene 938709 939224 . - . ID=gene-PUW34_04450;Name=PUW34_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04450 CP118122.1 Protein Homology CDS 938709 939224 . - 0 ID=cds-WJG97757.1;Parent=gene-PUW34_04450;Dbxref=NCBI_GP:WJG97757.1;Name=WJG97757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=PUW34_04450;product=lipoprotein;protein_id=WJG97757.1;transl_table=11 CP118122.1 Genbank gene 939352 939675 . + . ID=gene-PUW34_04455;Name=PUW34_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04455 CP118122.1 Protein Homology CDS 939352 939675 . + 0 ID=cds-WJG97758.1;Parent=gene-PUW34_04455;Dbxref=NCBI_GP:WJG97758.1;Name=WJG97758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=PUW34_04455;product=heavy metal-binding domain-containing protein;protein_id=WJG97758.1;transl_table=11 CP118122.1 Genbank gene 939672 940502 . + . ID=gene-PUW34_04460;Name=PUW34_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04460 CP118122.1 Protein Homology CDS 939672 940502 . + 0 ID=cds-WJG97759.1;Parent=gene-PUW34_04460;Dbxref=NCBI_GP:WJG97759.1;Name=WJG97759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=PUW34_04460;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WJG97759.1;transl_table=11 CP118122.1 Genbank gene 940499 941512 . - . ID=gene-PUW34_04465;Name=PUW34_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04465 CP118122.1 Protein Homology CDS 940499 941512 . - 0 ID=cds-WJG97760.1;Parent=gene-PUW34_04465;Dbxref=NCBI_GP:WJG97760.1;Name=WJG97760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=PUW34_04465;product=NAD(P)-dependent oxidoreductase;protein_id=WJG97760.1;transl_table=11 CP118122.1 Genbank pseudogene 941608 943040 . - . ID=gene-PUW34_04470;Name=PUW34_04470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04470;pseudo=true CP118122.1 Protein Homology CDS 941608 943040 . - 0 ID=cds-PUW34_04470;Parent=gene-PUW34_04470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=PUW34_04470;product=DUF2867 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 943051 944052 . - . ID=gene-PUW34_04475;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=PUW34_04475 CP118122.1 Protein Homology CDS 943051 944052 . - 0 ID=cds-WJG97761.1;Parent=gene-PUW34_04475;Dbxref=NCBI_GP:WJG97761.1;Name=WJG97761.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=PUW34_04475;product=low-specificity L-threonine aldolase;protein_id=WJG97761.1;transl_table=11 CP118122.1 Genbank gene 944091 945809 . - . ID=gene-PUW34_04480;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=PUW34_04480 CP118122.1 Protein Homology CDS 944091 945809 . - 0 ID=cds-WJG97762.1;Parent=gene-PUW34_04480;Dbxref=NCBI_GP:WJG97762.1;Name=WJG97762.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=PUW34_04480;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WJG97762.1;transl_table=11 CP118122.1 Genbank gene 945967 946935 . - . ID=gene-PUW34_04485;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=PUW34_04485 CP118122.1 Protein Homology CDS 945967 946935 . - 0 ID=cds-WJG98920.1;Parent=gene-PUW34_04485;Dbxref=NCBI_GP:WJG98920.1;Name=WJG98920.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=PUW34_04485;product=NADH oxidoreductase;protein_id=WJG98920.1;transl_table=11 CP118122.1 Genbank gene 946947 948599 . - . ID=gene-PUW34_04490;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=PUW34_04490 CP118122.1 Protein Homology CDS 946947 948599 . - 0 ID=cds-WJG97763.1;Parent=gene-PUW34_04490;Dbxref=NCBI_GP:WJG97763.1;Name=WJG97763.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=PUW34_04490;product=hydroxylamine reductase;protein_id=WJG97763.1;transl_table=11 CP118122.1 Genbank gene 948743 949642 . - . ID=gene-PUW34_04495;Name=PUW34_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04495 CP118122.1 Protein Homology CDS 948743 949642 . - 0 ID=cds-WJG97764.1;Parent=gene-PUW34_04495;Dbxref=NCBI_GP:WJG97764.1;Name=WJG97764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=PUW34_04495;product=lysine exporter LysO family protein;protein_id=WJG97764.1;transl_table=11 CP118122.1 Genbank gene 949844 951502 . + . ID=gene-PUW34_04500;Name=PUW34_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04500 CP118122.1 Protein Homology CDS 949844 951502 . + 0 ID=cds-WJG97765.1;Parent=gene-PUW34_04500;Dbxref=NCBI_GP:WJG97765.1;Name=WJG97765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=PUW34_04500;product=ATP-dependent endonuclease;protein_id=WJG97765.1;transl_table=11 CP118122.1 Genbank pseudogene 951499 952453 . - . ID=gene-PUW34_04505;Name=PUW34_04505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04505;pseudo=true CP118122.1 Protein Homology CDS 951499 952453 . - 0 ID=cds-PUW34_04505;Parent=gene-PUW34_04505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=PUW34_04505;product=VirK/YbjX family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 952599 953713 . + . ID=gene-PUW34_04510;Name=macA;gbkey=Gene;gene=macA;gene_biotype=pseudogene;locus_tag=PUW34_04510;pseudo=true CP118122.1 Protein Homology CDS 952599 953713 . + 0 ID=cds-PUW34_04510;Parent=gene-PUW34_04510;Note=frameshifted;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=PUW34_04510;product=macrolide transporter subunit MacA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 953710 955656 . + . ID=gene-PUW34_04515;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=PUW34_04515 CP118122.1 Protein Homology CDS 953710 955656 . + 0 ID=cds-WJG97766.1;Parent=gene-PUW34_04515;Dbxref=NCBI_GP:WJG97766.1;Name=WJG97766.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=macB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=PUW34_04515;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WJG97766.1;transl_table=11 CP118122.1 Genbank gene 955786 956007 . - . ID=gene-PUW34_04520;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=PUW34_04520 CP118122.1 Protein Homology CDS 955786 956007 . - 0 ID=cds-WJG97767.1;Parent=gene-PUW34_04520;Dbxref=NCBI_GP:WJG97767.1;Name=WJG97767.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=PUW34_04520;product=cold shock-like protein CspD;protein_id=WJG97767.1;transl_table=11 CP118122.1 Genbank gene 956158 956235 . + . ID=gene-PUW34_04525;Name=PUW34_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04525 CP118122.1 Protein Homology CDS 956158 956235 . + 0 ID=cds-WJG98921.1;Parent=gene-PUW34_04525;Dbxref=NCBI_GP:WJG98921.1;Name=WJG98921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=PUW34_04525;product=hypothetical protein;protein_id=WJG98921.1;transl_table=11 CP118122.1 Genbank gene 956331 956651 . + . ID=gene-PUW34_04530;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=PUW34_04530 CP118122.1 Protein Homology CDS 956331 956651 . + 0 ID=cds-WJG97768.1;Parent=gene-PUW34_04530;Dbxref=NCBI_GP:WJG97768.1;Name=WJG97768.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=PUW34_04530;product=ATP-dependent Clp protease adapter ClpS;protein_id=WJG97768.1;transl_table=11 CP118122.1 Genbank gene 956682 958958 . + . ID=gene-PUW34_04535;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=PUW34_04535 CP118122.1 Protein Homology CDS 956682 958958 . + 0 ID=cds-WJG97769.1;Parent=gene-PUW34_04535;Dbxref=NCBI_GP:WJG97769.1;Name=WJG97769.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=PUW34_04535;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WJG97769.1;transl_table=11 CP118122.1 Genbank gene 959171 959368 . - . ID=gene-PUW34_04540;Name=PUW34_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04540 CP118122.1 Protein Homology CDS 959171 959368 . - 0 ID=cds-WJG97770.1;Parent=gene-PUW34_04540;Dbxref=NCBI_GP:WJG97770.1;Name=WJG97770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=PUW34_04540;product=hypothetical protein;protein_id=WJG97770.1;transl_table=11 CP118122.1 Genbank gene 959530 959907 . - . ID=gene-PUW34_04545;Name=PUW34_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04545 CP118122.1 Protein Homology CDS 959530 959907 . - 0 ID=cds-WJG97771.1;Parent=gene-PUW34_04545;Dbxref=NCBI_GP:WJG97771.1;Name=WJG97771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535855.1;locus_tag=PUW34_04545;product=integrase;protein_id=WJG97771.1;transl_table=11 CP118122.1 Genbank gene 960338 960424 . - . ID=gene-PUW34_04550;Name=PUW34_04550;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_04550 CP118122.1 tRNAscan-SE tRNA 960338 960424 . - . ID=rna-PUW34_04550;Parent=gene-PUW34_04550;anticodon=(pos:complement(960388..960390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_04550;product=tRNA-Ser CP118122.1 tRNAscan-SE exon 960338 960424 . - . ID=exon-PUW34_04550-1;Parent=rna-PUW34_04550;anticodon=(pos:complement(960388..960390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_04550;product=tRNA-Ser CP118122.1 Genbank gene 960573 961250 . - . ID=gene-PUW34_04555;Name=PUW34_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04555 CP118122.1 Protein Homology CDS 960573 961250 . - 0 ID=cds-WJG97772.1;Parent=gene-PUW34_04555;Dbxref=NCBI_GP:WJG97772.1;Name=WJG97772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=PUW34_04555;product=hydrolase;protein_id=WJG97772.1;transl_table=11 CP118122.1 Genbank gene 961270 962130 . - . ID=gene-PUW34_04560;Name=PUW34_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04560 CP118122.1 Protein Homology CDS 961270 962130 . - 0 ID=cds-WJG97773.1;Parent=gene-PUW34_04560;Dbxref=NCBI_GP:WJG97773.1;Name=WJG97773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=PUW34_04560;product=pirin family protein;protein_id=WJG97773.1;transl_table=11 CP118122.1 Genbank gene 962239 963150 . + . ID=gene-PUW34_04565;Name=PUW34_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04565 CP118122.1 Protein Homology CDS 962239 963150 . + 0 ID=cds-WJG97774.1;Parent=gene-PUW34_04565;Dbxref=NCBI_GP:WJG97774.1;Name=WJG97774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=PUW34_04565;product=LysR family transcriptional regulator;protein_id=WJG97774.1;transl_table=11 CP118122.1 Genbank gene 963241 963459 . - . ID=gene-PUW34_04570;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=PUW34_04570 CP118122.1 Protein Homology CDS 963241 963459 . - 0 ID=cds-WJG97775.1;Parent=gene-PUW34_04570;Dbxref=NCBI_GP:WJG97775.1;Name=WJG97775.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=PUW34_04570;product=translation initiation factor IF-1;protein_id=WJG97775.1;transl_table=11 CP118122.1 Genbank gene 963387 963770 . - . ID=gene-PUW34_04575;Name=PUW34_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04575 CP118122.1 Protein Homology CDS 963387 963770 . - 0 ID=cds-WJG97776.1;Parent=gene-PUW34_04575;Dbxref=NCBI_GP:WJG97776.1;Name=WJG97776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459930.1;locus_tag=PUW34_04575;product=hypothetical protein;protein_id=WJG97776.1;transl_table=11 CP118122.1 Genbank gene 963771 964475 . - . ID=gene-PUW34_04580;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=PUW34_04580 CP118122.1 Protein Homology CDS 963771 964475 . - 0 ID=cds-WJG97777.1;Parent=gene-PUW34_04580;Dbxref=NCBI_GP:WJG97777.1;Name=WJG97777.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=PUW34_04580;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WJG97777.1;transl_table=11 CP118122.1 Genbank gene 964520 966241 . - . ID=gene-PUW34_04585;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=PUW34_04585 CP118122.1 Protein Homology CDS 964520 966241 . - 0 ID=cds-WJG97778.1;Parent=gene-PUW34_04585;Dbxref=NCBI_GP:WJG97778.1;Name=WJG97778.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=PUW34_04585;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WJG97778.1;transl_table=11 CP118122.1 Genbank gene 966242 968008 . - . ID=gene-PUW34_04590;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=PUW34_04590 CP118122.1 Protein Homology CDS 966242 968008 . - 0 ID=cds-WJG97779.1;Parent=gene-PUW34_04590;Dbxref=NCBI_GP:WJG97779.1;Name=WJG97779.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=PUW34_04590;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WJG97779.1;transl_table=11 CP118122.1 Genbank gene 968122 969090 . - . ID=gene-PUW34_04595;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=PUW34_04595 CP118122.1 Protein Homology CDS 968122 969090 . - 0 ID=cds-WJG97780.1;Parent=gene-PUW34_04595;Dbxref=NCBI_GP:WJG97780.1;Name=WJG97780.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=PUW34_04595;product=thioredoxin-disulfide reductase;protein_id=WJG97780.1;transl_table=11 CP118122.1 Genbank gene 969636 970130 . + . ID=gene-PUW34_04600;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=PUW34_04600 CP118122.1 Protein Homology CDS 969636 970130 . + 0 ID=cds-WJG97781.1;Parent=gene-PUW34_04600;Dbxref=NCBI_GP:WJG97781.1;Name=WJG97781.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=PUW34_04600;product=leucine-responsive transcriptional regulator Lrp;protein_id=WJG97781.1;transl_table=11 CP118122.1 Genbank gene 970265 974308 . + . ID=gene-PUW34_04605;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=PUW34_04605 CP118122.1 Protein Homology CDS 970265 974308 . + 0 ID=cds-WJG97782.1;Parent=gene-PUW34_04605;Dbxref=NCBI_GP:WJG97782.1;Name=WJG97782.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=PUW34_04605;product=DNA translocase FtsK;protein_id=WJG97782.1;transl_table=11 CP118122.1 Genbank gene 974451 975062 . + . ID=gene-PUW34_04610;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=PUW34_04610 CP118122.1 Protein Homology CDS 974451 975062 . + 0 ID=cds-WJG98922.1;Parent=gene-PUW34_04610;Dbxref=NCBI_GP:WJG98922.1;Name=WJG98922.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=PUW34_04610;product=outer membrane lipoprotein chaperone LolA;protein_id=WJG98922.1;transl_table=11 CP118122.1 Genbank gene 975072 976415 . + . ID=gene-PUW34_04615;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=PUW34_04615 CP118122.1 Protein Homology CDS 975072 976415 . + 0 ID=cds-WJG97783.1;Parent=gene-PUW34_04615;Dbxref=NCBI_GP:WJG97783.1;Name=WJG97783.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=PUW34_04615;product=replication-associated recombination protein RarA;protein_id=WJG97783.1;transl_table=11 CP118122.1 Genbank gene 976674 977966 . + . ID=gene-PUW34_04620;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=PUW34_04620 CP118122.1 Protein Homology CDS 976674 977966 . + 0 ID=cds-WJG97784.1;Parent=gene-PUW34_04620;Dbxref=NCBI_GP:WJG97784.1;Name=WJG97784.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=PUW34_04620;product=serine--tRNA ligase;protein_id=WJG97784.1;transl_table=11 CP118122.1 Genbank gene 978203 980647 . + . ID=gene-PUW34_04625;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=PUW34_04625 CP118122.1 Protein Homology CDS 978203 980647 . + 0 ID=cds-WJG97785.1;Parent=gene-PUW34_04625;Dbxref=NCBI_GP:WJG97785.1;Name=WJG97785.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=PUW34_04625;product=dimethylsulfoxide reductase subunit A;protein_id=WJG97785.1;transl_table=11 CP118122.1 Genbank gene 980658 981275 . + . ID=gene-PUW34_04630;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW34_04630 CP118122.1 Protein Homology CDS 980658 981275 . + 0 ID=cds-WJG97786.1;Parent=gene-PUW34_04630;Dbxref=NCBI_GP:WJG97786.1;Name=WJG97786.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PUW34_04630;product=dimethylsulfoxide reductase subunit B;protein_id=WJG97786.1;transl_table=11 CP118122.1 Genbank gene 981277 982140 . + . ID=gene-PUW34_04635;Name=PUW34_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04635 CP118122.1 Protein Homology CDS 981277 982140 . + 0 ID=cds-WJG97787.1;Parent=gene-PUW34_04635;Dbxref=NCBI_GP:WJG97787.1;Name=WJG97787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=PUW34_04635;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJG97787.1;transl_table=11 CP118122.1 Genbank gene 982490 983638 . + . ID=gene-PUW34_04640;Name=PUW34_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04640 CP118122.1 Protein Homology CDS 982490 983638 . + 0 ID=cds-WJG97788.1;Parent=gene-PUW34_04640;Dbxref=NCBI_GP:WJG97788.1;Name=WJG97788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=PUW34_04640;product=MFS transporter;protein_id=WJG97788.1;transl_table=11 CP118122.1 Genbank gene 983855 985276 . + . ID=gene-PUW34_04645;Name=PUW34_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04645 CP118122.1 Protein Homology CDS 983855 985276 . + 0 ID=cds-WJG97789.1;Parent=gene-PUW34_04645;Dbxref=NCBI_GP:WJG97789.1;Name=WJG97789.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=PUW34_04645;product=amino acid permease;protein_id=WJG97789.1;transl_table=11 CP118122.1 Genbank gene 985569 986366 . - . ID=gene-PUW34_04650;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=PUW34_04650 CP118122.1 Protein Homology CDS 985569 986366 . - 0 ID=cds-WJG97790.1;Parent=gene-PUW34_04650;Dbxref=NCBI_GP:WJG97790.1;Name=WJG97790.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=PUW34_04650;product=pyruvate formate lyase 1-activating protein;protein_id=WJG97790.1;transl_table=11 CP118122.1 Genbank gene 986485 986811 . - . ID=gene-PUW34_04655;Name=PUW34_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04655 CP118122.1 Protein Homology CDS 986485 986811 . - 0 ID=cds-WJG98923.1;Parent=gene-PUW34_04655;Dbxref=NCBI_GP:WJG98923.1;Name=WJG98923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=PUW34_04655;product=cytoplasmic protein;protein_id=WJG98923.1;transl_table=11 CP118122.1 Genbank gene 986941 987900 . + . ID=gene-PUW34_04660;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=PUW34_04660 CP118122.1 Protein Homology CDS 986941 987900 . + 0 ID=cds-WJG97791.1;Parent=gene-PUW34_04660;Dbxref=NCBI_GP:WJG97791.1;Name=WJG97791.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=PUW34_04660;product=SPI-2 type III secretion system effector SopD2;protein_id=WJG97791.1;transl_table=11 CP118122.1 Genbank pseudogene 987976 990256 . - . ID=gene-PUW34_04665;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=PUW34_04665;pseudo=true CP118122.1 Protein Homology CDS 987976 990256 . - 0 ID=cds-PUW34_04665;Parent=gene-PUW34_04665;Note=frameshifted;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=PUW34_04665;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 990316 991173 . - . ID=gene-PUW34_04670;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=PUW34_04670 CP118122.1 Protein Homology CDS 990316 991173 . - 0 ID=cds-WJG97792.1;Parent=gene-PUW34_04670;Dbxref=NCBI_GP:WJG97792.1;Name=WJG97792.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=PUW34_04670;product=formate transporter FocA;protein_id=WJG97792.1;transl_table=11 CP118122.1 Genbank gene 991578 993338 . - . ID=gene-PUW34_04675;Name=PUW34_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04675 CP118122.1 Protein Homology CDS 991578 993338 . - 0 ID=cds-WJG97793.1;Parent=gene-PUW34_04675;Dbxref=NCBI_GP:WJG97793.1;Name=WJG97793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=PUW34_04675;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WJG97793.1;transl_table=11 CP118122.1 Genbank gene 993475 994167 . + . ID=gene-PUW34_04680;Name=PUW34_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04680 CP118122.1 Protein Homology CDS 993475 994167 . + 0 ID=cds-WJG97794.1;Parent=gene-PUW34_04680;Dbxref=NCBI_GP:WJG97794.1;Name=WJG97794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=PUW34_04680;product=DUF421 domain-containing protein;protein_id=WJG97794.1;transl_table=11 CP118122.1 Genbank gene 994353 995441 . + . ID=gene-PUW34_04685;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=PUW34_04685 CP118122.1 Protein Homology CDS 994353 995441 . + 0 ID=cds-WJG97795.1;Parent=gene-PUW34_04685;Dbxref=NCBI_GP:WJG97795.1;Name=WJG97795.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=PUW34_04685;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WJG97795.1;transl_table=11 CP118122.1 Genbank gene 995512 996795 . + . ID=gene-PUW34_04690;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=PUW34_04690 CP118122.1 Protein Homology CDS 995512 996795 . + 0 ID=cds-WJG97796.1;Parent=gene-PUW34_04690;Dbxref=NCBI_GP:WJG97796.1;Name=WJG97796.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=PUW34_04690;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WJG97796.1;transl_table=11 CP118122.1 Genbank gene 996938 997699 . + . ID=gene-PUW34_04695;Name=PUW34_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04695 CP118122.1 Protein Homology CDS 996938 997699 . + 0 ID=cds-WJG97797.1;Parent=gene-PUW34_04695;Dbxref=NCBI_GP:WJG97797.1;Name=WJG97797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=PUW34_04695;product=M48 family metallopeptidase;protein_id=WJG97797.1;transl_table=11 CP118122.1 Genbank gene 997872 998555 . + . ID=gene-PUW34_04700;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=PUW34_04700 CP118122.1 Protein Homology CDS 997872 998555 . + 0 ID=cds-WJG97798.1;Parent=gene-PUW34_04700;Dbxref=NCBI_GP:WJG97798.1;Name=WJG97798.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=PUW34_04700;product=(d)CMP kinase;protein_id=WJG97798.1;transl_table=11 CP118122.1 Genbank gene 998669 1000342 . + . ID=gene-PUW34_04705;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=PUW34_04705 CP118122.1 Protein Homology CDS 998669 1000342 . + 0 ID=cds-WJG97799.1;Parent=gene-PUW34_04705;Dbxref=NCBI_GP:WJG97799.1;Name=WJG97799.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=PUW34_04705;product=30S ribosomal protein S1;protein_id=WJG97799.1;transl_table=11 CP118122.1 Genbank gene 1000498 1000782 . + . ID=gene-PUW34_04710;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=PUW34_04710 CP118122.1 Protein Homology CDS 1000498 1000782 . + 0 ID=cds-WJG97800.1;Parent=gene-PUW34_04710;Dbxref=NCBI_GP:WJG97800.1;Name=WJG97800.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=PUW34_04710;product=integration host factor subunit beta;protein_id=WJG97800.1;transl_table=11 CP118122.1 Genbank gene 1001012 1003276 . + . ID=gene-PUW34_04715;Name=PUW34_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04715 CP118122.1 Protein Homology CDS 1001012 1003276 . + 0 ID=cds-WJG97801.1;Parent=gene-PUW34_04715;Dbxref=NCBI_GP:WJG97801.1;Name=WJG97801.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=PUW34_04715;product=ComEC family protein;protein_id=WJG97801.1;transl_table=11 CP118122.1 Genbank gene 1003313 1005061 . + . ID=gene-PUW34_04720;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=PUW34_04720 CP118122.1 Protein Homology CDS 1003313 1005061 . + 0 ID=cds-WJG97802.1;Parent=gene-PUW34_04720;Dbxref=NCBI_GP:WJG97802.1;Name=WJG97802.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=PUW34_04720;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WJG97802.1;transl_table=11 CP118122.1 Genbank gene 1005058 1006035 . + . ID=gene-PUW34_04725;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=PUW34_04725 CP118122.1 Protein Homology CDS 1005058 1006035 . + 0 ID=cds-WJG97803.1;Parent=gene-PUW34_04725;Dbxref=NCBI_GP:WJG97803.1;Name=WJG97803.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=PUW34_04725;product=tetraacyldisaccharide 4'-kinase;protein_id=WJG97803.1;transl_table=11 CP118122.1 Genbank gene 1006084 1007310 . + . ID=gene-PUW34_04730;Name=PUW34_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04730 CP118122.1 Protein Homology CDS 1006084 1007310 . + 0 ID=cds-WJG98924.1;Parent=gene-PUW34_04730;Dbxref=NCBI_GP:WJG98924.1;Name=WJG98924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=PUW34_04730;product=winged helix-turn-helix domain-containing protein;protein_id=WJG98924.1;transl_table=11 CP118122.1 Genbank gene 1007362 1007544 . + . ID=gene-PUW34_04735;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=PUW34_04735 CP118122.1 Protein Homology CDS 1007362 1007544 . + 0 ID=cds-WJG97804.1;Parent=gene-PUW34_04735;Dbxref=NCBI_GP:WJG97804.1;Name=WJG97804.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=PUW34_04735;product=protein YcaR;protein_id=WJG97804.1;transl_table=11 CP118122.1 Genbank gene 1007541 1008287 . + . ID=gene-PUW34_04740;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=PUW34_04740 CP118122.1 Protein Homology CDS 1007541 1008287 . + 0 ID=cds-WJG97805.1;Parent=gene-PUW34_04740;Dbxref=NCBI_GP:WJG97805.1;Name=WJG97805.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=PUW34_04740;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WJG97805.1;transl_table=11 CP118122.1 Genbank gene 1008498 1009391 . + . ID=gene-PUW34_04745;Name=PUW34_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04745 CP118122.1 Protein Homology CDS 1008498 1009391 . + 0 ID=cds-WJG97806.1;Parent=gene-PUW34_04745;Dbxref=NCBI_GP:WJG97806.1;Name=WJG97806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=PUW34_04745;product=YcbJ family phosphotransferase;protein_id=WJG97806.1;transl_table=11 CP118122.1 Genbank gene 1009371 1010147 . - . ID=gene-PUW34_04750;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=PUW34_04750 CP118122.1 Protein Homology CDS 1009371 1010147 . - 0 ID=cds-WJG97807.1;Parent=gene-PUW34_04750;Dbxref=NCBI_GP:WJG97807.1;Name=WJG97807.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=PUW34_04750;product=envelope biogenesis factor ElyC;protein_id=WJG97807.1;transl_table=11 CP118122.1 Genbank gene 1010283 1011086 . + . ID=gene-PUW34_04755;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=PUW34_04755 CP118122.1 Protein Homology CDS 1010283 1011086 . + 0 ID=cds-WJG97808.1;Parent=gene-PUW34_04755;Dbxref=NCBI_GP:WJG97808.1;Name=WJG97808.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=PUW34_04755;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WJG97808.1;transl_table=11 CP118122.1 Genbank gene 1011079 1012401 . + . ID=gene-PUW34_04760;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=PUW34_04760 CP118122.1 Protein Homology CDS 1011079 1012401 . + 0 ID=cds-WJG97809.1;Parent=gene-PUW34_04760;Dbxref=NCBI_GP:WJG97809.1;Name=WJG97809.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=PUW34_04760;product=chromosome partition protein MukF;protein_id=WJG97809.1;transl_table=11 CP118122.1 Genbank gene 1012382 1013086 . + . ID=gene-PUW34_04765;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=PUW34_04765 CP118122.1 Protein Homology CDS 1012382 1013086 . + 0 ID=cds-WJG97810.1;Parent=gene-PUW34_04765;Dbxref=NCBI_GP:WJG97810.1;Name=WJG97810.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=PUW34_04765;product=chromosome partition protein MukE;protein_id=WJG97810.1;transl_table=11 CP118122.1 Genbank gene 1013086 1017552 . + . ID=gene-PUW34_04770;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=PUW34_04770 CP118122.1 Protein Homology CDS 1013086 1017552 . + 0 ID=cds-WJG97811.1;Parent=gene-PUW34_04770;Dbxref=NCBI_GP:WJG97811.1;Name=WJG97811.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=PUW34_04770;product=chromosome partition protein MukB;protein_id=WJG97811.1;transl_table=11 CP118122.1 Genbank gene 1017897 1019747 . + . ID=gene-PUW34_04775;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=PUW34_04775 CP118122.1 Protein Homology CDS 1017897 1019747 . + 0 ID=cds-WJG97812.1;Parent=gene-PUW34_04775;Dbxref=NCBI_GP:WJG97812.1;Name=WJG97812.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=PUW34_04775;product=L%2CD-transpeptidase;protein_id=WJG97812.1;transl_table=11 CP118122.1 Genbank gene 1020007 1020555 . + . ID=gene-PUW34_04780;Name=PUW34_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04780 CP118122.1 Protein Homology CDS 1020007 1020555 . + 0 ID=cds-WJG97813.1;Parent=gene-PUW34_04780;Dbxref=NCBI_GP:WJG97813.1;Name=WJG97813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=PUW34_04780;product=YcbK family protein;protein_id=WJG97813.1;transl_table=11 CP118122.1 Genbank gene 1020583 1021230 . + . ID=gene-PUW34_04785;Name=PUW34_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04785 CP118122.1 Protein Homology CDS 1020583 1021230 . + 0 ID=cds-WJG97814.1;Parent=gene-PUW34_04785;Dbxref=NCBI_GP:WJG97814.1;Name=WJG97814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=PUW34_04785;product=MBL fold metallo-hydrolase;protein_id=WJG97814.1;transl_table=11 CP118122.1 Genbank pseudogene 1021292 1022481 . - . ID=gene-PUW34_04790;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=pseudogene;locus_tag=PUW34_04790;pseudo=true CP118122.1 Protein Homology CDS 1021292 1022481 . - 0 ID=cds-PUW34_04790;Parent=gene-PUW34_04790;Note=frameshifted;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=PUW34_04790;product=aspartate transaminase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1022666 1023757 . - . ID=gene-PUW34_04795;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=PUW34_04795 CP118122.1 Protein Homology CDS 1022666 1023757 . - 0 ID=cds-WJG97815.1;Parent=gene-PUW34_04795;Dbxref=NCBI_GP:WJG97815.1;Name=WJG97815.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=PUW34_04795;product=porin OmpF;protein_id=WJG97815.1;transl_table=11 CP118122.1 Genbank gene 1024351 1025751 . - . ID=gene-PUW34_04800;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=PUW34_04800 CP118122.1 Protein Homology CDS 1024351 1025751 . - 0 ID=cds-WJG97816.1;Parent=gene-PUW34_04800;Dbxref=NCBI_GP:WJG97816.1;Name=WJG97816.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=PUW34_04800;product=asparagine--tRNA ligase;protein_id=WJG97816.1;transl_table=11 CP118122.1 Genbank gene 1025952 1026413 . - . ID=gene-PUW34_04805;Name=PUW34_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04805 CP118122.1 Protein Homology CDS 1025952 1026413 . - 0 ID=cds-WJG97817.1;Parent=gene-PUW34_04805;Dbxref=NCBI_GP:WJG97817.1;Name=WJG97817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=PUW34_04805;product=Lrp/AsnC family transcriptional regulator;protein_id=WJG97817.1;transl_table=11 CP118122.1 Genbank gene 1026731 1027945 . + . ID=gene-PUW34_04810;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=PUW34_04810 CP118122.1 Protein Homology CDS 1026731 1027945 . + 0 ID=cds-WJG97818.1;Parent=gene-PUW34_04810;Dbxref=NCBI_GP:WJG97818.1;Name=WJG97818.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=PUW34_04810;product=diaminopropionate ammonia-lyase;protein_id=WJG97818.1;transl_table=11 CP118122.1 Genbank gene 1028189 1029625 . + . ID=gene-PUW34_04815;Name=PUW34_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04815 CP118122.1 Protein Homology CDS 1028189 1029625 . + 0 ID=cds-WJG97819.1;Parent=gene-PUW34_04815;Dbxref=NCBI_GP:WJG97819.1;Name=WJG97819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459978.1;locus_tag=PUW34_04815;product=sodium:alanine symporter family protein;protein_id=WJG97819.1;transl_table=11 CP118122.1 Genbank gene 1029703 1030905 . - . ID=gene-PUW34_04820;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=PUW34_04820 CP118122.1 Protein Homology CDS 1029703 1030905 . - 0 ID=cds-WJG97820.1;Parent=gene-PUW34_04820;Dbxref=NCBI_GP:WJG97820.1;Name=WJG97820.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=PUW34_04820;product=nicotinate phosphoribosyltransferase;protein_id=WJG97820.1;transl_table=11 CP118122.1 Genbank gene 1031172 1033784 . + . ID=gene-PUW34_04825;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=PUW34_04825 CP118122.1 Protein Homology CDS 1031172 1033784 . + 0 ID=cds-WJG97821.1;Parent=gene-PUW34_04825;Dbxref=NCBI_GP:WJG97821.1;Name=WJG97821.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=PUW34_04825;product=aminopeptidase N;protein_id=WJG97821.1;transl_table=11 CP118122.1 Genbank gene 1033992 1035002 . + . ID=gene-PUW34_04830;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=PUW34_04830 CP118122.1 Protein Homology CDS 1033992 1035002 . + 0 ID=cds-WJG97822.1;Parent=gene-PUW34_04830;Dbxref=NCBI_GP:WJG97822.1;Name=WJG97822.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=PUW34_04830;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WJG97822.1;transl_table=11 CP118122.1 Genbank gene 1035168 1035710 . + . ID=gene-PUW34_04835;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=PUW34_04835 CP118122.1 Protein Homology CDS 1035168 1035710 . + 0 ID=cds-WJG97823.1;Parent=gene-PUW34_04835;Dbxref=NCBI_GP:WJG97823.1;Name=WJG97823.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=PUW34_04835;product=cell division protein ZapC;protein_id=WJG97823.1;transl_table=11 CP118122.1 Genbank pseudogene 1035707 1036815 . - . ID=gene-PUW34_04840;Name=PUW34_04840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04840;pseudo=true CP118122.1 Protein Homology CDS 1035707 1036815 . - 0 ID=cds-PUW34_04840;Parent=gene-PUW34_04840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=PUW34_04840;product=YcbX family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1036914 1039022 . + . ID=gene-PUW34_04845;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=PUW34_04845 CP118122.1 Protein Homology CDS 1036914 1039022 . + 0 ID=cds-WJG97824.1;Parent=gene-PUW34_04845;Dbxref=NCBI_GP:WJG97824.1;Name=WJG97824.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=PUW34_04845;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WJG97824.1;transl_table=11 CP118122.1 Genbank pseudogene 1039035 1040962 . + . ID=gene-PUW34_04850;Name=PUW34_04850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04850;pseudo=true CP118122.1 Protein Homology CDS 1039035 1040962 . + 0 ID=cds-PUW34_04850;Parent=gene-PUW34_04850;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226158.1;locus_tag=PUW34_04850;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1040955 1042208 . + . ID=gene-PUW34_04855;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=PUW34_04855 CP118122.1 Protein Homology CDS 1040955 1042208 . + 0 ID=cds-WJG97825.1;Parent=gene-PUW34_04855;Dbxref=NCBI_GP:WJG97825.1;Name=WJG97825.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=PUW34_04855;product=membrane integrity-associated transporter subunit PqiA;protein_id=WJG97825.1;transl_table=11 CP118122.1 Genbank gene 1042213 1043853 . + . ID=gene-PUW34_04860;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=PUW34_04860 CP118122.1 Protein Homology CDS 1042213 1043853 . + 0 ID=cds-WJG97826.1;Parent=gene-PUW34_04860;Dbxref=NCBI_GP:WJG97826.1;Name=WJG97826.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=PUW34_04860;product=intermembrane transport protein PqiB;protein_id=WJG97826.1;transl_table=11 CP118122.1 Genbank gene 1043850 1044413 . + . ID=gene-PUW34_04865;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=PUW34_04865 CP118122.1 Protein Homology CDS 1043850 1044413 . + 0 ID=cds-WJG97827.1;Parent=gene-PUW34_04865;Dbxref=NCBI_GP:WJG97827.1;Name=WJG97827.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=PUW34_04865;product=membrane integrity-associated transporter subunit PqiC;protein_id=WJG97827.1;transl_table=11 CP118122.1 Genbank gene 1044669 1044836 . + . ID=gene-PUW34_04870;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=PUW34_04870 CP118122.1 Protein Homology CDS 1044669 1044836 . + 0 ID=cds-WJG97828.1;Parent=gene-PUW34_04870;Dbxref=NCBI_GP:WJG97828.1;Name=WJG97828.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=PUW34_04870;product=ribosome modulation factor;protein_id=WJG97828.1;transl_table=11 CP118122.1 Genbank gene 1044936 1045454 . - . ID=gene-PUW34_04875;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=PUW34_04875 CP118122.1 Protein Homology CDS 1044936 1045454 . - 0 ID=cds-WJG97829.1;Parent=gene-PUW34_04875;Dbxref=NCBI_GP:WJG97829.1;Name=WJG97829.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=PUW34_04875;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WJG97829.1;transl_table=11 CP118122.1 Genbank gene 1045523 1047283 . - . ID=gene-PUW34_04880;Name=PUW34_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04880 CP118122.1 Protein Homology CDS 1045523 1047283 . - 0 ID=cds-WJG97830.1;Parent=gene-PUW34_04880;Dbxref=NCBI_GP:WJG97830.1;Name=WJG97830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=PUW34_04880;product=Lon protease family protein;protein_id=WJG97830.1;transl_table=11 CP118122.1 Genbank gene 1047469 1047921 . + . ID=gene-PUW34_04885;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=PUW34_04885 CP118122.1 Protein Homology CDS 1047469 1047921 . + 0 ID=cds-WJG97831.1;Parent=gene-PUW34_04885;Dbxref=NCBI_GP:WJG97831.1;Name=WJG97831.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=PUW34_04885;product=macrodomain Ter protein MatP;protein_id=WJG97831.1;transl_table=11 CP118122.1 Genbank gene 1047993 1049045 . - . ID=gene-PUW34_04890;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=PUW34_04890 CP118122.1 Protein Homology CDS 1047993 1049045 . - 0 ID=cds-WJG97832.1;Parent=gene-PUW34_04890;Dbxref=NCBI_GP:WJG97832.1;Name=WJG97832.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=PUW34_04890;product=porin OmpA;protein_id=WJG97832.1;transl_table=11 CP118122.1 Genbank gene 1049402 1049911 . - . ID=gene-PUW34_04895;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=PUW34_04895 CP118122.1 Protein Homology CDS 1049402 1049911 . - 0 ID=cds-WJG97833.1;Parent=gene-PUW34_04895;Dbxref=NCBI_GP:WJG97833.1;Name=WJG97833.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=PUW34_04895;product=cell division inhibitor SulA;protein_id=WJG97833.1;transl_table=11 CP118122.1 Genbank gene 1050128 1050733 . + . ID=gene-PUW34_04900;Name=PUW34_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04900 CP118122.1 Protein Homology CDS 1050128 1050733 . + 0 ID=cds-WJG97834.1;Parent=gene-PUW34_04900;Dbxref=NCBI_GP:WJG97834.1;Name=WJG97834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=PUW34_04900;product=TfoX/Sxy family DNA transformation protein;protein_id=WJG97834.1;transl_table=11 CP118122.1 Genbank gene 1050720 1052873 . - . ID=gene-PUW34_04905;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=PUW34_04905 CP118122.1 Protein Homology CDS 1050720 1052873 . - 0 ID=cds-WJG97835.1;Parent=gene-PUW34_04905;Dbxref=NCBI_GP:WJG97835.1;Name=WJG97835.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=PUW34_04905;product=YccS family putative transporter;protein_id=WJG97835.1;transl_table=11 CP118122.1 Genbank gene 1052892 1053338 . - . ID=gene-PUW34_04910;Name=PUW34_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04910 CP118122.1 Protein Homology CDS 1052892 1053338 . - 0 ID=cds-WJG97836.1;Parent=gene-PUW34_04910;Dbxref=NCBI_GP:WJG97836.1;Name=WJG97836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=PUW34_04910;product=YccF domain-containing protein;protein_id=WJG97836.1;transl_table=11 CP118122.1 Genbank gene 1053462 1055516 . + . ID=gene-PUW34_04915;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=PUW34_04915 CP118122.1 Protein Homology CDS 1053462 1055516 . + 0 ID=cds-WJG97837.1;Parent=gene-PUW34_04915;Dbxref=NCBI_GP:WJG97837.1;Name=WJG97837.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=PUW34_04915;product=DNA helicase IV;protein_id=WJG97837.1;transl_table=11 CP118122.1 Genbank gene 1055552 1056010 . - . ID=gene-PUW34_04920;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=PUW34_04920 CP118122.1 Protein Homology CDS 1055552 1056010 . - 0 ID=cds-WJG97838.1;Parent=gene-PUW34_04920;Dbxref=NCBI_GP:WJG97838.1;Name=WJG97838.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=PUW34_04920;product=methylglyoxal synthase;protein_id=WJG97838.1;transl_table=11 CP118122.1 Genbank pseudogene 1056105 1056440 . - . ID=gene-PUW34_04925;Name=PUW34_04925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_04925;pseudo=true CP118122.1 Protein Homology CDS 1056105 1056440 . - 0 ID=cds-PUW34_04925;Parent=gene-PUW34_04925;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021358.2;locus_tag=PUW34_04925;product=DUF2057 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1056383 1056766 . - . ID=gene-PUW34_04930;Name=PUW34_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04930 CP118122.1 Protein Homology CDS 1056383 1056766 . - 0 ID=cds-WJG97839.1;Parent=gene-PUW34_04930;Dbxref=NCBI_GP:WJG97839.1;Name=WJG97839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF002967.0;locus_tag=PUW34_04930;product=DUF2057 family protein;protein_id=WJG97839.1;transl_table=11 CP118122.1 Genbank gene 1056940 1057353 . + . ID=gene-PUW34_04935;Name=PUW34_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04935 CP118122.1 Protein Homology CDS 1056940 1057353 . + 0 ID=cds-WJG98925.1;Parent=gene-PUW34_04935;Dbxref=NCBI_GP:WJG98925.1;Name=WJG98925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=PUW34_04935;product=CoA-binding protein;protein_id=WJG98925.1;transl_table=11 CP118122.1 Genbank gene 1057398 1057715 . - . ID=gene-PUW34_04940;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=PUW34_04940 CP118122.1 Protein Homology CDS 1057398 1057715 . - 0 ID=cds-WJG97840.1;Parent=gene-PUW34_04940;Dbxref=NCBI_GP:WJG97840.1;Name=WJG97840.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=PUW34_04940;product=heat shock protein HspQ;protein_id=WJG97840.1;transl_table=11 CP118122.1 Genbank pseudogene 1057773 1058983 . - . ID=gene-PUW34_04945;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=pseudogene;locus_tag=PUW34_04945;pseudo=true CP118122.1 Protein Homology CDS 1057773 1058983 . - 0 ID=cds-PUW34_04945;Parent=gene-PUW34_04945;Note=frameshifted;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=PUW34_04945;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1059198 1059746 . + . ID=gene-PUW34_04950;Name=PUW34_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04950 CP118122.1 Protein Homology CDS 1059198 1059746 . + 0 ID=cds-WJG97841.1;Parent=gene-PUW34_04950;Dbxref=NCBI_GP:WJG97841.1;Name=WJG97841.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=PUW34_04950;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WJG97841.1;transl_table=11 CP118122.1 Genbank gene 1059772 1060551 . + . ID=gene-PUW34_04955;Name=PUW34_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04955 CP118122.1 Protein Homology CDS 1059772 1060551 . + 0 ID=cds-WJG97842.1;Parent=gene-PUW34_04955;Dbxref=NCBI_GP:WJG97842.1;Name=WJG97842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=PUW34_04955;product=AraC family transcriptional regulator;protein_id=WJG97842.1;transl_table=11 CP118122.1 Genbank gene 1060600 1060881 . + . ID=gene-PUW34_04960;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=PUW34_04960 CP118122.1 Protein Homology CDS 1060600 1060881 . + 0 ID=cds-WJG97843.1;Parent=gene-PUW34_04960;Dbxref=NCBI_GP:WJG97843.1;Name=WJG97843.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=PUW34_04960;product=acylphosphatase;protein_id=WJG97843.1;transl_table=11 CP118122.1 Genbank gene 1060878 1061207 . - . ID=gene-PUW34_04965;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=PUW34_04965 CP118122.1 Protein Homology CDS 1060878 1061207 . - 0 ID=cds-WJG97844.1;Parent=gene-PUW34_04965;Dbxref=NCBI_GP:WJG97844.1;Name=WJG97844.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=PUW34_04965;product=sulfurtransferase TusE;protein_id=WJG97844.1;transl_table=11 CP118122.1 Genbank gene 1061294 1061953 . - . ID=gene-PUW34_04970;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=PUW34_04970 CP118122.1 Protein Homology CDS 1061294 1061953 . - 0 ID=cds-WJG97845.1;Parent=gene-PUW34_04970;Dbxref=NCBI_GP:WJG97845.1;Name=WJG97845.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=PUW34_04970;product=FtsH protease modulator YccA;protein_id=WJG97845.1;transl_table=11 CP118122.1 Genbank gene 1062348 1062435 . + . ID=gene-PUW34_04975;Name=PUW34_04975;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_04975 CP118122.1 tRNAscan-SE tRNA 1062348 1062435 . + . ID=rna-PUW34_04975;Parent=gene-PUW34_04975;anticodon=(pos:1062382..1062384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_04975;product=tRNA-Ser CP118122.1 tRNAscan-SE exon 1062348 1062435 . + . ID=exon-PUW34_04975-1;Parent=rna-PUW34_04975;anticodon=(pos:1062382..1062384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_04975;product=tRNA-Ser CP118122.1 Genbank gene 1062572 1063252 . - . ID=gene-PUW34_04980;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=PUW34_04980 CP118122.1 Protein Homology CDS 1062572 1063252 . - 0 ID=cds-WJG97846.1;Parent=gene-PUW34_04980;Dbxref=NCBI_GP:WJG97846.1;Name=WJG97846.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=PUW34_04980;product=type III secretion system effector protease PipA;protein_id=WJG97846.1;transl_table=11 CP118122.1 Genbank gene 1063472 1064347 . - . ID=gene-PUW34_04985;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=PUW34_04985 CP118122.1 Protein Homology CDS 1063472 1064347 . - 0 ID=cds-WJG97847.1;Parent=gene-PUW34_04985;Dbxref=NCBI_GP:WJG97847.1;Name=WJG97847.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=PUW34_04985;product=SPI-2 type III secretion system effector PipB;protein_id=WJG97847.1;transl_table=11 CP118122.1 Genbank gene 1064565 1064885 . + . ID=gene-PUW34_04990;Name=PUW34_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_04990 CP118122.1 Protein Homology CDS 1064565 1064885 . + 0 ID=cds-WJG97848.1;Parent=gene-PUW34_04990;Dbxref=NCBI_GP:WJG97848.1;Name=WJG97848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=PUW34_04990;product=hypothetical protein;protein_id=WJG97848.1;transl_table=11 CP118122.1 Genbank gene 1064895 1065236 . - . ID=gene-PUW34_04995;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=PUW34_04995 CP118122.1 Protein Homology CDS 1064895 1065236 . - 0 ID=cds-WJG97849.1;Parent=gene-PUW34_04995;Dbxref=NCBI_GP:WJG97849.1;Name=WJG97849.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=PUW34_04995;product=type III secretion system chaperone SigE;protein_id=WJG97849.1;transl_table=11 CP118122.1 Genbank gene 1065253 1066938 . - . ID=gene-PUW34_05000;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=PUW34_05000 CP118122.1 Protein Homology CDS 1065253 1066938 . - 0 ID=cds-WJG98926.1;Parent=gene-PUW34_05000;Dbxref=NCBI_GP:WJG98926.1;Name=WJG98926.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=PUW34_05000;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WJG98926.1;transl_table=11 CP118122.1 Genbank gene 1067270 1067440 . + . ID=gene-PUW34_05005;Name=PUW34_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05005 CP118122.1 Protein Homology CDS 1067270 1067440 . + 0 ID=cds-WJG97850.1;Parent=gene-PUW34_05005;Dbxref=NCBI_GP:WJG97850.1;Name=WJG97850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=PUW34_05005;product=YlcI/YnfO family protein;protein_id=WJG97850.1;transl_table=11 CP118122.1 Genbank gene 1067441 1067551 . - . ID=gene-PUW34_05010;Name=PUW34_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05010 CP118122.1 Protein Homology CDS 1067441 1067551 . - 0 ID=cds-WJG97851.1;Parent=gene-PUW34_05010;Dbxref=NCBI_GP:WJG97851.1;Name=WJG97851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=PUW34_05010;product=hypothetical protein;protein_id=WJG97851.1;transl_table=11 CP118122.1 Genbank gene 1067660 1069129 . - . ID=gene-PUW34_05015;Name=PUW34_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05015 CP118122.1 Protein Homology CDS 1067660 1069129 . - 0 ID=cds-WJG97852.1;Parent=gene-PUW34_05015;Dbxref=NCBI_GP:WJG97852.1;Name=WJG97852.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=PUW34_05015;product=C69 family dipeptidase;protein_id=WJG97852.1;transl_table=11 CP118122.1 Genbank gene 1069302 1070666 . - . ID=gene-PUW34_05020;Name=PUW34_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05020 CP118122.1 Protein Homology CDS 1069302 1070666 . - 0 ID=cds-WJG97853.1;Parent=gene-PUW34_05020;Dbxref=NCBI_GP:WJG97853.1;Name=WJG97853.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=PUW34_05020;product=heavy metal sensor histidine kinase;protein_id=WJG97853.1;transl_table=11 CP118122.1 Genbank gene 1070659 1071339 . - . ID=gene-PUW34_05025;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=PUW34_05025 CP118122.1 Protein Homology CDS 1070659 1071339 . - 0 ID=cds-WJG97854.1;Parent=gene-PUW34_05025;Dbxref=NCBI_GP:WJG97854.1;Name=WJG97854.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=PUW34_05025;product=response regulator transcription factor HprR;protein_id=WJG97854.1;transl_table=11 CP118122.1 Genbank gene 1071475 1071885 . + . ID=gene-PUW34_05030;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=PUW34_05030 CP118122.1 Protein Homology CDS 1071475 1071885 . + 0 ID=cds-WJG97855.1;Parent=gene-PUW34_05030;Dbxref=NCBI_GP:WJG97855.1;Name=WJG97855.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=PUW34_05030;product=hydroxyisourate hydrolase;protein_id=WJG97855.1;transl_table=11 CP118122.1 Genbank gene 1072218 1072730 . - . ID=gene-PUW34_05035;Name=PUW34_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05035 CP118122.1 Protein Homology CDS 1072218 1072730 . - 0 ID=cds-WJG97856.1;Parent=gene-PUW34_05035;Dbxref=NCBI_GP:WJG97856.1;Name=WJG97856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=PUW34_05035;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WJG97856.1;transl_table=11 CP118122.1 Genbank gene 1072748 1074310 . - . ID=gene-PUW34_05040;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=PUW34_05040 CP118122.1 Protein Homology CDS 1072748 1074310 . - 0 ID=cds-WJG97857.1;Parent=gene-PUW34_05040;Dbxref=NCBI_GP:WJG97857.1;Name=WJG97857.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=PUW34_05040;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WJG97857.1;transl_table=11 CP118122.1 Genbank gene 1074528 1074968 . - . ID=gene-PUW34_05045;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=PUW34_05045 CP118122.1 Protein Homology CDS 1074528 1074968 . - 0 ID=cds-WJG97858.1;Parent=gene-PUW34_05045;Dbxref=NCBI_GP:WJG97858.1;Name=WJG97858.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=PUW34_05045;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WJG97858.1;transl_table=11 CP118122.1 Genbank gene 1075243 1076532 . + . ID=gene-PUW34_05050;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=PUW34_05050 CP118122.1 Protein Homology CDS 1075243 1076532 . + 0 ID=cds-WJG97859.1;Parent=gene-PUW34_05050;Dbxref=NCBI_GP:WJG97859.1;Name=WJG97859.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=PUW34_05050;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WJG97859.1;transl_table=11 CP118122.1 Genbank pseudogene 1076529 1077994 . + . ID=gene-PUW34_05055;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=pseudogene;locus_tag=PUW34_05055;pseudo=true CP118122.1 Protein Homology CDS 1076529 1077994 . + 0 ID=cds-PUW34_05055;Parent=gene-PUW34_05055;Note=frameshifted;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=PUW34_05055;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1077996 1078847 . + . ID=gene-PUW34_05060;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=PUW34_05060 CP118122.1 Protein Homology CDS 1077996 1078847 . + 0 ID=cds-WJG97860.1;Parent=gene-PUW34_05060;Dbxref=NCBI_GP:WJG97860.1;Name=WJG97860.1;Ontology_term=GO:0006725,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=PUW34_05060;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WJG97860.1;transl_table=11 CP118122.1 Genbank gene 1078857 1079237 . + . ID=gene-PUW34_05065;Name=PUW34_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05065 CP118122.1 Protein Homology CDS 1078857 1079237 . + 0 ID=cds-WJG97861.1;Parent=gene-PUW34_05065;Dbxref=NCBI_GP:WJG97861.1;Name=WJG97861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=PUW34_05065;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WJG97861.1;transl_table=11 CP118122.1 Genbank gene 1079380 1080183 . + . ID=gene-PUW34_05070;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=PUW34_05070 CP118122.1 Protein Homology CDS 1079380 1080183 . + 0 ID=cds-WJG97862.1;Parent=gene-PUW34_05070;Dbxref=NCBI_GP:WJG97862.1;Name=WJG97862.1;Ontology_term=GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=PUW34_05070;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=WJG97862.1;transl_table=11 CP118122.1 Genbank gene 1080194 1080985 . + . ID=gene-PUW34_05075;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=PUW34_05075 CP118122.1 Protein Homology CDS 1080194 1080985 . + 0 ID=cds-WJG97863.1;Parent=gene-PUW34_05075;Dbxref=NCBI_GP:WJG97863.1;Name=WJG97863.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=PUW34_05075;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WJG97863.1;transl_table=11 CP118122.1 Genbank gene 1081057 1082433 . + . ID=gene-PUW34_05080;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=PUW34_05080 CP118122.1 Protein Homology CDS 1081057 1082433 . + 0 ID=cds-WJG97864.1;Parent=gene-PUW34_05080;Dbxref=NCBI_GP:WJG97864.1;Name=WJG97864.1;Ontology_term=GO:0055085,GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=transmembrane transport|0055085||IEA,4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=PUW34_05080;product=4-hydroxyphenylacetate permease;protein_id=WJG97864.1;transl_table=11 CP118122.1 Genbank gene 1082443 1083339 . + . ID=gene-PUW34_05085;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=PUW34_05085 CP118122.1 Protein Homology CDS 1082443 1083339 . + 0 ID=cds-WJG97865.1;Parent=gene-PUW34_05085;Dbxref=NCBI_GP:WJG97865.1;Name=WJG97865.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=PUW34_05085;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WJG97865.1;transl_table=11 CP118122.1 Genbank gene 1083353 1084291 . + . ID=gene-PUW34_05090;Name=PUW34_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05090 CP118122.1 Protein Homology CDS 1083353 1084291 . + 0 ID=cds-WJG97866.1;Parent=gene-PUW34_05090;Dbxref=NCBI_GP:WJG97866.1;Name=WJG97866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=PUW34_05090;product=MBL fold metallo-hydrolase;protein_id=WJG97866.1;transl_table=11 CP118122.1 Genbank gene 1084699 1085061 . - . ID=gene-PUW34_05095;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=PUW34_05095 CP118122.1 Protein Homology CDS 1084699 1085061 . - 0 ID=cds-WJG97867.1;Parent=gene-PUW34_05095;Dbxref=NCBI_GP:WJG97867.1;Name=WJG97867.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=PUW34_05095;product=anti-adapter protein IraM;protein_id=WJG97867.1;transl_table=11 CP118122.1 Genbank gene 1085715 1086020 . - . ID=gene-PUW34_05100;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=PUW34_05100 CP118122.1 Protein Homology CDS 1085715 1086020 . - 0 ID=cds-WJG97868.1;Parent=gene-PUW34_05100;Dbxref=NCBI_GP:WJG97868.1;Name=WJG97868.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=PUW34_05100;product=chaperone modulator CbpM;protein_id=WJG97868.1;transl_table=11 CP118122.1 Genbank gene 1086020 1086940 . - . ID=gene-PUW34_05105;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=PUW34_05105 CP118122.1 Protein Homology CDS 1086020 1086940 . - 0 ID=cds-WJG97869.1;Parent=gene-PUW34_05105;Dbxref=NCBI_GP:WJG97869.1;Name=WJG97869.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=PUW34_05105;product=curved DNA-binding protein;protein_id=WJG97869.1;transl_table=11 CP118122.1 Genbank gene 1087176 1087538 . + . ID=gene-PUW34_05110;Name=PUW34_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05110 CP118122.1 Protein Homology CDS 1087176 1087538 . + 0 ID=cds-WJG97870.1;Parent=gene-PUW34_05110;Dbxref=NCBI_GP:WJG97870.1;Name=WJG97870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=PUW34_05110;product=copper resistance protein;protein_id=WJG97870.1;transl_table=11 CP118122.1 Genbank gene 1087587 1089473 . + . ID=gene-PUW34_05115;Name=PUW34_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05115 CP118122.1 Protein Homology CDS 1087587 1089473 . + 0 ID=cds-WJG97871.1;Parent=gene-PUW34_05115;Dbxref=NCBI_GP:WJG97871.1;Name=WJG97871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=PUW34_05115;product=protein-disulfide reductase DsbD family protein;protein_id=WJG97871.1;transl_table=11 CP118122.1 Genbank gene 1089470 1090093 . + . ID=gene-PUW34_05120;Name=PUW34_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05120 CP118122.1 Protein Homology CDS 1089470 1090093 . + 0 ID=cds-WJG97872.1;Parent=gene-PUW34_05120;Dbxref=NCBI_GP:WJG97872.1;Name=WJG97872.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=PUW34_05120;product=DsbA family protein;protein_id=WJG97872.1;transl_table=11 CP118122.1 Genbank pseudogene 1090083 1090587 . + . ID=gene-PUW34_05125;Name=PUW34_05125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05125;pseudo=true CP118122.1 Protein Homology CDS 1090083 1090587 . + 0 ID=cds-PUW34_05125;Parent=gene-PUW34_05125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=PUW34_05125;product=protein disulfide oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1090720 1091961 . + . ID=gene-PUW34_05130;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=PUW34_05130 CP118122.1 Protein Homology CDS 1090720 1091961 . + 0 ID=cds-WJG97873.1;Parent=gene-PUW34_05130;Dbxref=NCBI_GP:WJG97873.1;Name=WJG97873.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=PUW34_05130;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WJG97873.1;transl_table=11 CP118122.1 Genbank pseudogene 1091995 1092221 . - . ID=gene-PUW34_05135;Name=PUW34_05135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05135;pseudo=true CP118122.1 Protein Homology CDS 1091995 1092221 . - 0 ID=cds-PUW34_05135;Parent=gene-PUW34_05135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=PUW34_05135;product=YccJ family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1092242 1092838 . - . ID=gene-PUW34_05140;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=PUW34_05140 CP118122.1 Protein Homology CDS 1092242 1092838 . - 0 ID=cds-WJG97874.1;Parent=gene-PUW34_05140;Dbxref=NCBI_GP:WJG97874.1;Name=WJG97874.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=PUW34_05140;product=NAD(P)H:quinone oxidoreductase;protein_id=WJG97874.1;transl_table=11 CP118122.1 Genbank gene 1093223 1093390 . + . ID=gene-PUW34_05145;Name=PUW34_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05145 CP118122.1 Protein Homology CDS 1093223 1093390 . + 0 ID=cds-WJG97875.1;Parent=gene-PUW34_05145;Dbxref=NCBI_GP:WJG97875.1;Name=WJG97875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=PUW34_05145;product=general stress protein;protein_id=WJG97875.1;transl_table=11 CP118122.1 Genbank pseudogene 1093417 1093809 . + . ID=gene-PUW34_05150;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=pseudogene;locus_tag=PUW34_05150;pseudo=true CP118122.1 Protein Homology CDS 1093417 1093809 . + 0 ID=cds-PUW34_05150;Parent=gene-PUW34_05150;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=PUW34_05150;product=HTH-type transcriptional regulator RutR;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1093806 1094201 . - . ID=gene-PUW34_05155;Name=PUW34_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05155 CP118122.1 Protein Homology CDS 1093806 1094201 . - 0 ID=cds-WJG97876.1;Parent=gene-PUW34_05155;Dbxref=NCBI_GP:WJG97876.1;Name=WJG97876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=PUW34_05155;product=lysozyme inhibitor LprI family protein;protein_id=WJG97876.1;transl_table=11 CP118122.1 Genbank pseudogene 1094260 1098221 . - . ID=gene-PUW34_05160;Name=putA;gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=PUW34_05160;pseudo=true CP118122.1 Protein Homology CDS 1094260 1098221 . - 0 ID=cds-PUW34_05160;Parent=gene-PUW34_05160;Note=frameshifted;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=PUW34_05160;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1098643 1100151 . + . ID=gene-PUW34_05165;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=PUW34_05165 CP118122.1 Protein Homology CDS 1098643 1100151 . + 0 ID=cds-WJG97877.1;Parent=gene-PUW34_05165;Dbxref=NCBI_GP:WJG97877.1;Name=WJG97877.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=PUW34_05165;product=sodium/proline symporter PutP;protein_id=WJG97877.1;transl_table=11 CP118122.1 Genbank gene 1101043 1101831 . + . ID=gene-PUW34_05170;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=PUW34_05170 CP118122.1 Protein Homology CDS 1101043 1101831 . + 0 ID=cds-WJG97878.1;Parent=gene-PUW34_05170;Dbxref=NCBI_GP:WJG97878.1;Name=WJG97878.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=PUW34_05170;product=phosphate starvation-inducible protein PhoH;protein_id=WJG97878.1;transl_table=11 CP118122.1 Genbank gene 1101937 1102818 . - . ID=gene-PUW34_05175;Name=PUW34_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05175 CP118122.1 Protein Homology CDS 1101937 1102818 . - 0 ID=cds-WJG97879.1;Parent=gene-PUW34_05175;Dbxref=NCBI_GP:WJG97879.1;Name=WJG97879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=PUW34_05175;product=MurR/RpiR family transcriptional regulator;protein_id=WJG97879.1;transl_table=11 CP118122.1 Genbank gene 1103104 1104600 . - . ID=gene-PUW34_05180;Name=PUW34_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05180 CP118122.1 Protein Homology CDS 1103104 1104600 . - 0 ID=cds-WJG97880.1;Parent=gene-PUW34_05180;Dbxref=NCBI_GP:WJG97880.1;Name=WJG97880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=PUW34_05180;product=sodium:solute symporter;protein_id=WJG97880.1;transl_table=11 CP118122.1 Genbank gene 1104937 1105617 . - . ID=gene-PUW34_05185;Name=PUW34_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05185 CP118122.1 Protein Homology CDS 1104937 1105617 . - 0 ID=cds-WJG97881.1;Parent=gene-PUW34_05185;Dbxref=NCBI_GP:WJG97881.1;Name=WJG97881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=PUW34_05185;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WJG97881.1;transl_table=11 CP118122.1 Genbank pseudogene 1106123 1107274 . + . ID=gene-PUW34_05190;Name=PUW34_05190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05190;pseudo=true CP118122.1 Protein Homology CDS 1106123 1107274 . + 0 ID=cds-PUW34_05190;Parent=gene-PUW34_05190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=PUW34_05190;product=N-acetylneuraminate epimerase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1107320 1108012 . + . ID=gene-PUW34_05195;Name=PUW34_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05195 CP118122.1 Protein Homology CDS 1107320 1108012 . + 0 ID=cds-WJG97882.1;Parent=gene-PUW34_05195;Dbxref=NCBI_GP:WJG97882.1;Name=WJG97882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=PUW34_05195;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WJG97882.1;transl_table=11 CP118122.1 Genbank gene 1108295 1109575 . + . ID=gene-PUW34_05200;Name=PUW34_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05200 CP118122.1 Protein Homology CDS 1108295 1109575 . + 0 ID=cds-WJG97883.1;Parent=gene-PUW34_05200;Dbxref=NCBI_GP:WJG97883.1;Name=WJG97883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=PUW34_05200;product=MFS transporter;protein_id=WJG97883.1;transl_table=11 CP118122.1 Genbank pseudogene 1109586 1110692 . + . ID=gene-PUW34_05205;Name=PUW34_05205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05205;pseudo=true CP118122.1 Protein Homology CDS 1109586 1110692 . + 0 ID=cds-PUW34_05205;Parent=gene-PUW34_05205;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=PUW34_05205;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1110859 1111152 . - . ID=gene-PUW34_05210;Name=PUW34_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05210 CP118122.1 Protein Homology CDS 1110859 1111152 . - 0 ID=cds-WJG97884.1;Parent=gene-PUW34_05210;Dbxref=NCBI_GP:WJG97884.1;Name=WJG97884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=PUW34_05210;product=YciI family protein;protein_id=WJG97884.1;transl_table=11 CP118122.1 Genbank gene 1111183 1111401 . + . ID=gene-PUW34_05215;Name=PUW34_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05215 CP118122.1 Protein Homology CDS 1111183 1111401 . + 0 ID=cds-WJG97885.1;Parent=gene-PUW34_05215;Dbxref=NCBI_GP:WJG97885.1;Name=WJG97885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880618.1;locus_tag=PUW34_05215;product=hypothetical protein;protein_id=WJG97885.1;transl_table=11 CP118122.1 Genbank gene 1112002 1112460 . - . ID=gene-PUW34_05220;Name=PUW34_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05220 CP118122.1 Protein Homology CDS 1112002 1112460 . - 0 ID=cds-WJG97886.1;Parent=gene-PUW34_05220;Dbxref=NCBI_GP:WJG97886.1;Name=WJG97886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623372.1;locus_tag=PUW34_05220;product=DUF1311 domain-containing protein;protein_id=WJG97886.1;transl_table=11 CP118122.1 Genbank gene 1112584 1112955 . - . ID=gene-PUW34_05225;Name=PUW34_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05225 CP118122.1 Protein Homology CDS 1112584 1112955 . - 0 ID=cds-WJG97887.1;Parent=gene-PUW34_05225;Dbxref=NCBI_GP:WJG97887.1;Name=WJG97887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747240.1;locus_tag=PUW34_05225;product=hypothetical protein;protein_id=WJG97887.1;transl_table=11 CP118122.1 Genbank gene 1112964 1113287 . - . ID=gene-PUW34_05230;Name=PUW34_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05230 CP118122.1 GeneMarkS-2+ CDS 1112964 1113287 . - 0 ID=cds-WJG97888.1;Parent=gene-PUW34_05230;Dbxref=NCBI_GP:WJG97888.1;Name=WJG97888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_05230;product=DUF1311 domain-containing protein;protein_id=WJG97888.1;transl_table=11 CP118122.1 Genbank gene 1113423 1114295 . - . ID=gene-PUW34_05235;Name=PUW34_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05235 CP118122.1 Protein Homology CDS 1113423 1114295 . - 0 ID=cds-WJG97889.1;Parent=gene-PUW34_05235;Dbxref=NCBI_GP:WJG97889.1;Name=WJG97889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712141.1;locus_tag=PUW34_05235;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WJG97889.1;transl_table=11 CP118122.1 Genbank gene 1114328 1114807 . - . ID=gene-PUW34_05240;Name=PUW34_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05240 CP118122.1 Protein Homology CDS 1114328 1114807 . - 0 ID=cds-WJG97890.1;Parent=gene-PUW34_05240;Dbxref=NCBI_GP:WJG97890.1;Name=WJG97890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284963.1;locus_tag=PUW34_05240;product=Hcp family type VI secretion system effector;protein_id=WJG97890.1;transl_table=11 CP118122.1 Genbank gene 1114795 1116189 . - . ID=gene-PUW34_05245;Name=PUW34_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05245 CP118122.1 Protein Homology CDS 1114795 1116189 . - 0 ID=cds-WJG97891.1;Parent=gene-PUW34_05245;Dbxref=NCBI_GP:WJG97891.1;Name=WJG97891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076067.1;locus_tag=PUW34_05245;product=VasL domain-containing protein;protein_id=WJG97891.1;transl_table=11 CP118122.1 Genbank gene 1116200 1119661 . - . ID=gene-PUW34_05250;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=PUW34_05250 CP118122.1 Protein Homology CDS 1116200 1119661 . - 0 ID=cds-WJG98927.1;Parent=gene-PUW34_05250;Dbxref=NCBI_GP:WJG98927.1;Name=WJG98927.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914744.1;locus_tag=PUW34_05250;product=type VI secretion system membrane subunit TssM;protein_id=WJG98927.1;transl_table=11 CP118122.1 Genbank gene 1119740 1121125 . - . ID=gene-PUW34_05255;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=PUW34_05255 CP118122.1 Protein Homology CDS 1119740 1121125 . - 0 ID=cds-WJG98928.1;Parent=gene-PUW34_05255;Dbxref=NCBI_GP:WJG98928.1;Name=WJG98928.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752219.1;locus_tag=PUW34_05255;product=type VI secretion system protein TssA;protein_id=WJG98928.1;transl_table=11 CP118122.1 Genbank gene 1121154 1121891 . - . ID=gene-PUW34_05260;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=PUW34_05260 CP118122.1 Protein Homology CDS 1121154 1121891 . - 0 ID=cds-WJG97892.1;Parent=gene-PUW34_05260;Dbxref=NCBI_GP:WJG97892.1;Name=WJG97892.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089149.1;locus_tag=PUW34_05260;product=type VI secretion system-associated protein VasI;protein_id=WJG97892.1;transl_table=11 CP118122.1 Genbank gene 1121888 1124551 . - . ID=gene-PUW34_05265;Name=PUW34_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05265 CP118122.1 Protein Homology CDS 1121888 1124551 . - 0 ID=cds-WJG97893.1;Parent=gene-PUW34_05265;Dbxref=NCBI_GP:WJG97893.1;Name=WJG97893.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614299.1;locus_tag=PUW34_05265;product=AAA family ATPase;protein_id=WJG97893.1;transl_table=11 CP118122.1 Genbank gene 1124564 1125322 . - . ID=gene-PUW34_05270;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=PUW34_05270 CP118122.1 Protein Homology CDS 1124564 1125322 . - 0 ID=cds-WJG97894.1;Parent=gene-PUW34_05270;Dbxref=NCBI_GP:WJG97894.1;Name=WJG97894.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343977.1;locus_tag=PUW34_05270;product=type IVB secretion system protein IcmH/DotU;protein_id=WJG97894.1;transl_table=11 CP118122.1 Genbank gene 1125327 1126658 . - . ID=gene-PUW34_05275;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=PUW34_05275 CP118122.1 Protein Homology CDS 1125327 1126658 . - 0 ID=cds-WJG97895.1;Parent=gene-PUW34_05275;Dbxref=NCBI_GP:WJG97895.1;Name=WJG97895.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308252.1;locus_tag=PUW34_05275;product=type VI secretion system baseplate subunit TssK;protein_id=WJG97895.1;transl_table=11 CP118122.1 Genbank gene 1126661 1127194 . - . ID=gene-PUW34_05280;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=PUW34_05280 CP118122.1 Protein Homology CDS 1126661 1127194 . - 0 ID=cds-WJG97896.1;Parent=gene-PUW34_05280;Dbxref=NCBI_GP:WJG97896.1;Name=WJG97896.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001013424.1;locus_tag=PUW34_05280;product=type VI secretion system lipoprotein TssJ;protein_id=WJG97896.1;transl_table=11 CP118122.1 Genbank gene 1127191 1128477 . - . ID=gene-PUW34_05285;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=PUW34_05285 CP118122.1 Protein Homology CDS 1127191 1128477 . - 0 ID=cds-WJG97897.1;Parent=gene-PUW34_05285;Dbxref=NCBI_GP:WJG97897.1;Name=WJG97897.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=PUW34_05285;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WJG97897.1;transl_table=11 CP118122.1 Genbank gene 1128502 1129590 . - . ID=gene-PUW34_05290;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=PUW34_05290 CP118122.1 Protein Homology CDS 1128502 1129590 . - 0 ID=cds-WJG97898.1;Parent=gene-PUW34_05290;Dbxref=NCBI_GP:WJG97898.1;Name=WJG97898.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509052.1;locus_tag=PUW34_05290;product=type VI secretion system baseplate subunit TssG;protein_id=WJG97898.1;transl_table=11 CP118122.1 Genbank pseudogene 1129554 1131406 . - . ID=gene-PUW34_05295;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=pseudogene;locus_tag=PUW34_05295;pseudo=true CP118122.1 Protein Homology CDS 1129554 1131406 . - 0 ID=cds-PUW34_05295;Parent=gene-PUW34_05295;Note=frameshifted;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=PUW34_05295;product=type VI secretion system baseplate subunit TssF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1131411 1131827 . - . ID=gene-PUW34_05300;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=PUW34_05300 CP118122.1 Protein Homology CDS 1131411 1131827 . - 0 ID=cds-WJG97899.1;Parent=gene-PUW34_05300;Dbxref=NCBI_GP:WJG97899.1;Name=WJG97899.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686004.1;locus_tag=PUW34_05300;product=type VI secretion system baseplate subunit TssE;protein_id=WJG97899.1;transl_table=11 CP118122.1 Genbank gene 1131824 1133296 . - . ID=gene-PUW34_05305;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=PUW34_05305 CP118122.1 Protein Homology CDS 1131824 1133296 . - 0 ID=cds-WJG97900.1;Parent=gene-PUW34_05305;Dbxref=NCBI_GP:WJG97900.1;Name=WJG97900.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056998.1;locus_tag=PUW34_05305;product=type VI secretion system contractile sheath large subunit;protein_id=WJG97900.1;transl_table=11 CP118122.1 Genbank gene 1133587 1134090 . - . ID=gene-PUW34_05310;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=PUW34_05310 CP118122.1 Protein Homology CDS 1133587 1134090 . - 0 ID=cds-WJG97901.1;Parent=gene-PUW34_05310;Dbxref=NCBI_GP:WJG97901.1;Name=WJG97901.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=PUW34_05310;product=type VI secretion system contractile sheath small subunit;protein_id=WJG97901.1;transl_table=11 CP118122.1 Genbank gene 1134720 1135238 . + . ID=gene-PUW34_05315;Name=PUW34_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05315 CP118122.1 Protein Homology CDS 1134720 1135238 . + 0 ID=cds-WJG97902.1;Parent=gene-PUW34_05315;Dbxref=NCBI_GP:WJG97902.1;Name=WJG97902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=PUW34_05315;product=Hcp family type VI secretion system effector;protein_id=WJG97902.1;transl_table=11 CP118122.1 Genbank gene 1135460 1137571 . + . ID=gene-PUW34_05320;Name=PUW34_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05320 CP118122.1 Protein Homology CDS 1135460 1137571 . + 0 ID=cds-WJG97903.1;Parent=gene-PUW34_05320;Dbxref=NCBI_GP:WJG97903.1;Name=WJG97903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103445.1;locus_tag=PUW34_05320;product=type VI secretion system tip protein VgrG;protein_id=WJG97903.1;transl_table=11 CP118122.1 Genbank pseudogene 1137673 1141484 . + . ID=gene-PUW34_05325;Name=PUW34_05325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05325;pseudo=true CP118122.1 Protein Homology CDS 1137673 1141484 . + 0 ID=cds-PUW34_05325;Parent=gene-PUW34_05325;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530200.1;locus_tag=PUW34_05325;product=DUF6531 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1141488 1142069 . + . ID=gene-PUW34_05330;Name=PUW34_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05330 CP118122.1 GeneMarkS-2+ CDS 1141488 1142069 . + 0 ID=cds-WJG99081.1;Parent=gene-PUW34_05330;Dbxref=NCBI_GP:WJG99081.1;Name=WJG99081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_05330;product=hypothetical protein;protein_id=WJG99081.1;transl_table=11 CP118122.1 Genbank gene 1142080 1142466 . + . ID=gene-PUW34_05335;Name=PUW34_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05335 CP118122.1 Protein Homology CDS 1142080 1142466 . + 0 ID=cds-WJG97904.1;Parent=gene-PUW34_05335;Dbxref=NCBI_GP:WJG97904.1;Name=WJG97904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622532.1;locus_tag=PUW34_05335;product=hypothetical protein;protein_id=WJG97904.1;transl_table=11 CP118122.1 Genbank gene 1142885 1147042 . + . ID=gene-PUW34_05340;Name=PUW34_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05340 CP118122.1 Protein Homology CDS 1142885 1147042 . + 0 ID=cds-WJG97905.1;Parent=gene-PUW34_05340;Dbxref=NCBI_GP:WJG97905.1;Name=WJG97905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509054.1;locus_tag=PUW34_05340;product=RHS element core protein;protein_id=WJG97905.1;transl_table=11 CP118122.1 Genbank gene 1147570 1148130 . + . ID=gene-PUW34_05345;Name=PUW34_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05345 CP118122.1 Protein Homology CDS 1147570 1148130 . + 0 ID=cds-WJG98929.1;Parent=gene-PUW34_05345;Dbxref=NCBI_GP:WJG98929.1;Name=WJG98929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=PUW34_05345;product=hypothetical protein;protein_id=WJG98929.1;transl_table=11 CP118122.1 Genbank gene 1148260 1148649 . + . ID=gene-PUW34_05350;Name=PUW34_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05350 CP118122.1 Protein Homology CDS 1148260 1148649 . + 0 ID=cds-WJG97906.1;Parent=gene-PUW34_05350;Dbxref=NCBI_GP:WJG97906.1;Name=WJG97906.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=PUW34_05350;product=tetratricopeptide repeat protein;protein_id=WJG97906.1;transl_table=11 CP118122.1 Genbank gene 1148712 1148972 . + . ID=gene-PUW34_05355;Name=PUW34_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05355 CP118122.1 Protein Homology CDS 1148712 1148972 . + 0 ID=cds-WJG97907.1;Parent=gene-PUW34_05355;Dbxref=NCBI_GP:WJG97907.1;Name=WJG97907.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=PUW34_05355;product=hypothetical protein;protein_id=WJG97907.1;transl_table=11 CP118122.1 Genbank gene 1149030 1149161 . + . ID=gene-PUW34_05360;Name=PUW34_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05360 CP118122.1 GeneMarkS-2+ CDS 1149030 1149161 . + 0 ID=cds-WJG97908.1;Parent=gene-PUW34_05360;Dbxref=NCBI_GP:WJG97908.1;Name=WJG97908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_05360;product=hypothetical protein;protein_id=WJG97908.1;transl_table=11 CP118122.1 Genbank pseudogene 1149355 1150504 . + . ID=gene-PUW34_05365;Name=PUW34_05365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05365;pseudo=true CP118122.1 Protein Homology CDS 1149355 1150504 . + 0 ID=cds-PUW34_05365;Parent=gene-PUW34_05365;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW34_05365;product=IS3-like element IS1230B family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1150643 1151422 . - . ID=gene-PUW34_05370;Name=PUW34_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05370 CP118122.1 Protein Homology CDS 1150643 1151422 . - 0 ID=cds-WJG97909.1;Parent=gene-PUW34_05370;Dbxref=NCBI_GP:WJG97909.1;Name=WJG97909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686692.1;locus_tag=PUW34_05370;product=hypothetical protein;protein_id=WJG97909.1;transl_table=11 CP118122.1 Genbank gene 1151690 1151968 . + . ID=gene-PUW34_05375;Name=PUW34_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05375 CP118122.1 Protein Homology CDS 1151690 1151968 . + 0 ID=cds-WJG97910.1;Parent=gene-PUW34_05375;Dbxref=NCBI_GP:WJG97910.1;Name=WJG97910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675348.1;locus_tag=PUW34_05375;product=hypothetical protein;protein_id=WJG97910.1;transl_table=11 CP118122.1 Genbank gene 1151965 1152342 . + . ID=gene-PUW34_05380;Name=PUW34_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05380 CP118122.1 Protein Homology CDS 1151965 1152342 . + 0 ID=cds-WJG97911.1;Parent=gene-PUW34_05380;Dbxref=NCBI_GP:WJG97911.1;Name=WJG97911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574179.1;locus_tag=PUW34_05380;product=hypothetical protein;protein_id=WJG97911.1;transl_table=11 CP118122.1 Genbank gene 1152882 1153094 . + . ID=gene-PUW34_05385;Name=PUW34_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05385 CP118122.1 Protein Homology CDS 1152882 1153094 . + 0 ID=cds-WJG97912.1;Parent=gene-PUW34_05385;Dbxref=NCBI_GP:WJG97912.1;Name=WJG97912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=PUW34_05385;product=cold-shock protein;protein_id=WJG97912.1;transl_table=11 CP118122.1 Genbank gene 1153105 1153293 . + . ID=gene-PUW34_05390;Name=PUW34_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05390 CP118122.1 Protein Homology CDS 1153105 1153293 . + 0 ID=cds-WJG98930.1;Parent=gene-PUW34_05390;Dbxref=NCBI_GP:WJG98930.1;Name=WJG98930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=PUW34_05390;product=cold-shock protein;protein_id=WJG98930.1;transl_table=11 CP118122.1 Genbank gene 1153552 1154748 . - . ID=gene-PUW34_05395;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=PUW34_05395 CP118122.1 Protein Homology CDS 1153552 1154748 . - 0 ID=cds-WJG97913.1;Parent=gene-PUW34_05395;Dbxref=NCBI_GP:WJG97913.1;Name=WJG97913.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=PUW34_05395;product=porin OmpS1;protein_id=WJG97913.1;transl_table=11 CP118122.1 Genbank gene 1155397 1155708 . + . ID=gene-PUW34_05400;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=PUW34_05400 CP118122.1 Protein Homology CDS 1155397 1155708 . + 0 ID=cds-WJG97914.1;Parent=gene-PUW34_05400;Dbxref=NCBI_GP:WJG97914.1;Name=WJG97914.1;gbkey=CDS;gene=drpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107428.1;locus_tag=PUW34_05400;product=cell division protein DrpB;protein_id=WJG97914.1;transl_table=11 CP118122.1 Genbank gene 1155788 1156483 . + . ID=gene-PUW34_05405;Name=PUW34_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05405 CP118122.1 Protein Homology CDS 1155788 1156483 . + 0 ID=cds-WJG97915.1;Parent=gene-PUW34_05405;Dbxref=NCBI_GP:WJG97915.1;Name=WJG97915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=PUW34_05405;product=phosphohydrolase;protein_id=WJG97915.1;transl_table=11 CP118122.1 Genbank gene 1156557 1157987 . + . ID=gene-PUW34_05410;Name=PUW34_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05410 CP118122.1 Protein Homology CDS 1156557 1157987 . + 0 ID=cds-WJG97916.1;Parent=gene-PUW34_05410;Dbxref=NCBI_GP:WJG97916.1;Name=WJG97916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=PUW34_05410;product=DNA cytosine methyltransferase;protein_id=WJG97916.1;transl_table=11 CP118122.1 Genbank gene 1157968 1158438 . + . ID=gene-PUW34_05415;Name=PUW34_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05415 CP118122.1 Protein Homology CDS 1157968 1158438 . + 0 ID=cds-WJG97917.1;Parent=gene-PUW34_05415;Dbxref=NCBI_GP:WJG97917.1;Name=WJG97917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=PUW34_05415;product=very short patch repair endonuclease;protein_id=WJG97917.1;transl_table=11 CP118122.1 Genbank pseudogene 1158427 1159342 . - . ID=gene-PUW34_05420;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=pseudogene;locus_tag=PUW34_05420;pseudo=true CP118122.1 Protein Homology CDS 1158427 1159342 . - 0 ID=cds-PUW34_05420;Parent=gene-PUW34_05420;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=PUW34_05420;product=drug/metabolite exporter YedA;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1159512 1160428 . + . ID=gene-PUW34_05425;Name=PUW34_05425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05425;pseudo=true CP118122.1 Protein Homology CDS 1159512 1160428 . + 0 ID=cds-PUW34_05425;Parent=gene-PUW34_05425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=PUW34_05425;product=DUF808 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1160505 1160690 . + . ID=gene-PUW34_05430;Name=PUW34_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05430 CP118122.1 Protein Homology CDS 1160505 1160690 . + 0 ID=cds-WJG97918.1;Parent=gene-PUW34_05430;Dbxref=NCBI_GP:WJG97918.1;Name=WJG97918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=PUW34_05430;product=YodC family protein;protein_id=WJG97918.1;transl_table=11 CP118122.1 Genbank gene 1160855 1162567 . + . ID=gene-PUW34_05435;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=PUW34_05435 CP118122.1 Protein Homology CDS 1160855 1162567 . + 0 ID=cds-WJG97919.1;Parent=gene-PUW34_05435;Dbxref=NCBI_GP:WJG97919.1;Name=WJG97919.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=PUW34_05435;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WJG97919.1;transl_table=11 CP118122.1 Genbank gene 1162546 1163361 . - . ID=gene-PUW34_05440;Name=PUW34_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05440 CP118122.1 Protein Homology CDS 1162546 1163361 . - 0 ID=cds-WJG97920.1;Parent=gene-PUW34_05440;Dbxref=NCBI_GP:WJG97920.1;Name=WJG97920.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=PUW34_05440;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WJG97920.1;transl_table=11 CP118122.1 Genbank gene 1163671 1163898 . - . ID=gene-PUW34_05445;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=PUW34_05445 CP118122.1 Protein Homology CDS 1163671 1163898 . - 0 ID=cds-WJG97921.1;Parent=gene-PUW34_05445;Dbxref=NCBI_GP:WJG97921.1;Name=WJG97921.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=PUW34_05445;product=YodD family peroxide/acid resistance protein;protein_id=WJG97921.1;transl_table=11 CP118122.1 Genbank gene 1164027 1164221 . + . ID=gene-PUW34_05450;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=PUW34_05450 CP118122.1 Protein Homology CDS 1164027 1164221 . + 0 ID=cds-WJG97922.1;Parent=gene-PUW34_05450;Dbxref=NCBI_GP:WJG97922.1;Name=WJG97922.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=PUW34_05450;product=protein DsrB;protein_id=WJG97922.1;transl_table=11 CP118122.1 Genbank gene 1164260 1164883 . - . ID=gene-PUW34_05455;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=PUW34_05455 CP118122.1 Protein Homology CDS 1164260 1164883 . - 0 ID=cds-WJG97923.1;Parent=gene-PUW34_05455;Dbxref=NCBI_GP:WJG97923.1;Name=WJG97923.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=PUW34_05455;product=transcriptional regulator RcsA;protein_id=WJG97923.1;transl_table=11 CP118122.1 Genbank gene 1165165 1165959 . - . ID=gene-PUW34_05460;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=PUW34_05460 CP118122.1 Protein Homology CDS 1165165 1165959 . - 0 ID=cds-WJG97924.1;Parent=gene-PUW34_05460;Dbxref=NCBI_GP:WJG97924.1;Name=WJG97924.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=PUW34_05460;product=flagellar biosynthetic protein FliR;protein_id=WJG97924.1;transl_table=11 CP118122.1 Genbank gene 1165968 1166237 . - . ID=gene-PUW34_05465;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=PUW34_05465 CP118122.1 Protein Homology CDS 1165968 1166237 . - 0 ID=cds-WJG97925.1;Parent=gene-PUW34_05465;Dbxref=NCBI_GP:WJG97925.1;Name=WJG97925.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=PUW34_05465;product=flagellar biosynthesis protein FliQ;protein_id=WJG97925.1;transl_table=11 CP118122.1 Genbank gene 1166247 1166984 . - . ID=gene-PUW34_05470;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=PUW34_05470 CP118122.1 Protein Homology CDS 1166247 1166984 . - 0 ID=cds-WJG97926.1;Parent=gene-PUW34_05470;Dbxref=NCBI_GP:WJG97926.1;Name=WJG97926.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=PUW34_05470;product=flagellar type III secretion system pore protein FliP;protein_id=WJG97926.1;transl_table=11 CP118122.1 Genbank gene 1166984 1167361 . - . ID=gene-PUW34_05475;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=PUW34_05475 CP118122.1 Protein Homology CDS 1166984 1167361 . - 0 ID=cds-WJG97927.1;Parent=gene-PUW34_05475;Dbxref=NCBI_GP:WJG97927.1;Name=WJG97927.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=PUW34_05475;product=flagellar biosynthetic protein FliO;protein_id=WJG97927.1;transl_table=11 CP118122.1 Genbank gene 1167361 1167774 . - . ID=gene-PUW34_05480;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=PUW34_05480 CP118122.1 Protein Homology CDS 1167361 1167774 . - 0 ID=cds-WJG97928.1;Parent=gene-PUW34_05480;Dbxref=NCBI_GP:WJG97928.1;Name=WJG97928.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=PUW34_05480;product=flagellar motor switch protein FliN;protein_id=WJG97928.1;transl_table=11 CP118122.1 Genbank gene 1167771 1168775 . - . ID=gene-PUW34_05485;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=PUW34_05485 CP118122.1 Protein Homology CDS 1167771 1168775 . - 0 ID=cds-WJG97929.1;Parent=gene-PUW34_05485;Dbxref=NCBI_GP:WJG97929.1;Name=WJG97929.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=PUW34_05485;product=flagellar motor switch protein FliM;protein_id=WJG97929.1;transl_table=11 CP118122.1 Genbank gene 1168780 1169247 . - . ID=gene-PUW34_05490;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=PUW34_05490 CP118122.1 Protein Homology CDS 1168780 1169247 . - 0 ID=cds-WJG97930.1;Parent=gene-PUW34_05490;Dbxref=NCBI_GP:WJG97930.1;Name=WJG97930.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=PUW34_05490;product=flagellar basal body-associated protein FliL;protein_id=WJG97930.1;transl_table=11 CP118122.1 Genbank gene 1169352 1170569 . - . ID=gene-PUW34_05495;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=PUW34_05495 CP118122.1 Protein Homology CDS 1169352 1170569 . - 0 ID=cds-WJG97931.1;Parent=gene-PUW34_05495;Dbxref=NCBI_GP:WJG97931.1;Name=WJG97931.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=PUW34_05495;product=flagellar hook length control protein FliK;protein_id=WJG97931.1;transl_table=11 CP118122.1 Genbank gene 1170566 1171009 . - . ID=gene-PUW34_05500;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=PUW34_05500 CP118122.1 Protein Homology CDS 1170566 1171009 . - 0 ID=cds-WJG97932.1;Parent=gene-PUW34_05500;Dbxref=NCBI_GP:WJG97932.1;Name=WJG97932.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=PUW34_05500;product=flagellar export protein FliJ;protein_id=WJG97932.1;transl_table=11 CP118122.1 Genbank gene 1171031 1172401 . - . ID=gene-PUW34_05505;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=PUW34_05505 CP118122.1 Protein Homology CDS 1171031 1172401 . - 0 ID=cds-WJG97933.1;Parent=gene-PUW34_05505;Dbxref=NCBI_GP:WJG97933.1;Name=WJG97933.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=PUW34_05505;product=flagellar protein export ATPase FliI;protein_id=WJG97933.1;transl_table=11 CP118122.1 Genbank gene 1172401 1173108 . - . ID=gene-PUW34_05510;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=PUW34_05510 CP118122.1 Protein Homology CDS 1172401 1173108 . - 0 ID=cds-WJG97934.1;Parent=gene-PUW34_05510;Dbxref=NCBI_GP:WJG97934.1;Name=WJG97934.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=PUW34_05510;product=flagellar assembly protein FliH;protein_id=WJG97934.1;transl_table=11 CP118122.1 Genbank gene 1173101 1174096 . - . ID=gene-PUW34_05515;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=PUW34_05515 CP118122.1 Protein Homology CDS 1173101 1174096 . - 0 ID=cds-WJG97935.1;Parent=gene-PUW34_05515;Dbxref=NCBI_GP:WJG97935.1;Name=WJG97935.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=PUW34_05515;product=flagellar motor switch protein FliG;protein_id=WJG97935.1;transl_table=11 CP118122.1 Genbank gene 1174089 1175765 . - . ID=gene-PUW34_05520;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=PUW34_05520 CP118122.1 Protein Homology CDS 1174089 1175765 . - 0 ID=cds-WJG97936.1;Parent=gene-PUW34_05520;Dbxref=NCBI_GP:WJG97936.1;Name=WJG97936.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=PUW34_05520;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WJG97936.1;transl_table=11 CP118122.1 Genbank gene 1175982 1176296 . + . ID=gene-PUW34_05525;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=PUW34_05525 CP118122.1 Protein Homology CDS 1175982 1176296 . + 0 ID=cds-WJG97937.1;Parent=gene-PUW34_05525;Dbxref=NCBI_GP:WJG97937.1;Name=WJG97937.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=PUW34_05525;product=flagellar hook-basal body complex protein FliE;protein_id=WJG97937.1;transl_table=11 CP118122.1 Genbank gene 1176416 1176802 . - . ID=gene-PUW34_05530;Name=PUW34_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05530 CP118122.1 Protein Homology CDS 1176416 1176802 . - 0 ID=cds-WJG98931.1;Parent=gene-PUW34_05530;Dbxref=NCBI_GP:WJG98931.1;Name=WJG98931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=PUW34_05530;product=hypothetical protein;protein_id=WJG98931.1;transl_table=11 CP118122.1 Genbank gene 1177067 1177300 . - . ID=gene-PUW34_05535;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=PUW34_05535 CP118122.1 Protein Homology CDS 1177067 1177300 . - 0 ID=cds-WJG97938.1;Parent=gene-PUW34_05535;Dbxref=NCBI_GP:WJG97938.1;Name=WJG97938.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=PUW34_05535;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WJG97938.1;transl_table=11 CP118122.1 Genbank pseudogene 1177297 1178501 . - . ID=gene-PUW34_05540;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=pseudogene;locus_tag=PUW34_05540;pseudo=true CP118122.1 Protein Homology CDS 1177297 1178501 . - 0 ID=cds-PUW34_05540;Parent=gene-PUW34_05540;Note=frameshifted;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=PUW34_05540;product=selenium metabolism membrane protein YedE/FdhT;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1178687 1179088 . + . ID=gene-PUW34_05545;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=PUW34_05545 CP118122.1 Protein Homology CDS 1178687 1179088 . + 0 ID=cds-WJG98932.1;Parent=gene-PUW34_05545;Dbxref=NCBI_GP:WJG98932.1;Name=WJG98932.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754693.1;locus_tag=PUW34_05545;product=lipoprotein YedD;protein_id=WJG98932.1;transl_table=11 CP118122.1 Genbank pseudogene 1179128 1180611 . - . ID=gene-PUW34_05550;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=pseudogene;locus_tag=PUW34_05550;pseudo=true CP118122.1 Protein Homology CDS 1179128 1180611 . - 0 ID=cds-PUW34_05550;Parent=gene-PUW34_05550;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=PUW34_05550;product=alpha-amylase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1180683 1181051 . - . ID=gene-PUW34_05555;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=PUW34_05555 CP118122.1 Protein Homology CDS 1180683 1181051 . - 0 ID=cds-WJG97939.1;Parent=gene-PUW34_05555;Dbxref=NCBI_GP:WJG97939.1;Name=WJG97939.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=PUW34_05555;product=flagella biosynthesis regulatory protein FliT;protein_id=WJG97939.1;transl_table=11 CP118122.1 Genbank gene 1181051 1181458 . - . ID=gene-PUW34_05560;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=PUW34_05560 CP118122.1 Protein Homology CDS 1181051 1181458 . - 0 ID=cds-WJG97940.1;Parent=gene-PUW34_05560;Dbxref=NCBI_GP:WJG97940.1;Name=WJG97940.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=PUW34_05560;product=flagellar export chaperone FliS;protein_id=WJG97940.1;transl_table=11 CP118122.1 Genbank gene 1181473 1182879 . - . ID=gene-PUW34_05565;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=PUW34_05565 CP118122.1 Protein Homology CDS 1181473 1182879 . - 0 ID=cds-WJG97941.1;Parent=gene-PUW34_05565;Dbxref=NCBI_GP:WJG97941.1;Name=WJG97941.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=PUW34_05565;product=flagellar filament capping protein FliD;protein_id=WJG97941.1;transl_table=11 CP118122.1 Genbank gene 1182878 1183117 . + . ID=gene-PUW34_05570;Name=PUW34_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05570 CP118122.1 GeneMarkS-2+ CDS 1182878 1183117 . + 0 ID=cds-WJG97942.1;Parent=gene-PUW34_05570;Dbxref=NCBI_GP:WJG97942.1;Name=WJG97942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_05570;product=hypothetical protein;protein_id=WJG97942.1;transl_table=11 CP118122.1 Genbank gene 1183135 1184652 . + . ID=gene-PUW34_05575;Name=PUW34_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05575 CP118122.1 Protein Homology CDS 1183135 1184652 . + 0 ID=cds-WJG97943.1;Parent=gene-PUW34_05575;Dbxref=NCBI_GP:WJG97943.1;Name=WJG97943.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=PUW34_05575;product=flagellin;protein_id=WJG97943.1;transl_table=11 CP118122.1 Genbank gene 1184731 1185936 . + . ID=gene-PUW34_05580;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=PUW34_05580 CP118122.1 Protein Homology CDS 1184731 1185936 . + 0 ID=cds-WJG97944.1;Parent=gene-PUW34_05580;Dbxref=NCBI_GP:WJG97944.1;Name=WJG97944.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=PUW34_05580;product=flagellin lysine-N-methylase;protein_id=WJG97944.1;transl_table=11 CP118122.1 Genbank gene 1186133 1186852 . + . ID=gene-PUW34_05585;Name=PUW34_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05585 CP118122.1 Protein Homology CDS 1186133 1186852 . + 0 ID=cds-WJG97945.1;Parent=gene-PUW34_05585;Dbxref=NCBI_GP:WJG97945.1;Name=WJG97945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=PUW34_05585;product=RNA polymerase sigma factor FliA;protein_id=WJG97945.1;transl_table=11 CP118122.1 Genbank pseudogene 1186911 1187463 . + . ID=gene-PUW34_05590;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=pseudogene;locus_tag=PUW34_05590;pseudo=true CP118122.1 Protein Homology CDS 1186911 1187463 . + 0 ID=cds-PUW34_05590;Parent=gene-PUW34_05590;Note=frameshifted;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=PUW34_05590;product=flagella biosynthesis regulatory protein FliZ;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1187610 1188410 . + . ID=gene-PUW34_05595;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=PUW34_05595 CP118122.1 Protein Homology CDS 1187610 1188410 . + 0 ID=cds-WJG97946.1;Parent=gene-PUW34_05595;Dbxref=NCBI_GP:WJG97946.1;Name=WJG97946.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=PUW34_05595;product=cystine ABC transporter substrate-binding protein;protein_id=WJG97946.1;transl_table=11 CP118122.1 Genbank gene 1188564 1189550 . + . ID=gene-PUW34_05600;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=PUW34_05600 CP118122.1 Protein Homology CDS 1188564 1189550 . + 0 ID=cds-WJG97947.1;Parent=gene-PUW34_05600;Dbxref=NCBI_GP:WJG97947.1;Name=WJG97947.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=PUW34_05600;product=D-cysteine desulfhydrase;protein_id=WJG97947.1;transl_table=11 CP118122.1 Genbank gene 1189571 1190239 . + . ID=gene-PUW34_05605;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=PUW34_05605 CP118122.1 Protein Homology CDS 1189571 1190239 . + 0 ID=cds-WJG97948.1;Parent=gene-PUW34_05605;Dbxref=NCBI_GP:WJG97948.1;Name=WJG97948.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=PUW34_05605;product=cystine ABC transporter permease;protein_id=WJG97948.1;transl_table=11 CP118122.1 Genbank gene 1190236 1190988 . + . ID=gene-PUW34_05610;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=PUW34_05610 CP118122.1 Protein Homology CDS 1190236 1190988 . + 0 ID=cds-WJG97949.1;Parent=gene-PUW34_05610;Dbxref=NCBI_GP:WJG97949.1;Name=WJG97949.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=PUW34_05610;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WJG97949.1;transl_table=11 CP118122.1 Genbank gene 1191221 1191943 . + . ID=gene-PUW34_05615;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=PUW34_05615 CP118122.1 Protein Homology CDS 1191221 1191943 . + 0 ID=cds-WJG97950.1;Parent=gene-PUW34_05615;Dbxref=NCBI_GP:WJG97950.1;Name=WJG97950.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=PUW34_05615;product=transcriptional regulator SdiA;protein_id=WJG97950.1;transl_table=11 CP118122.1 Genbank gene 1192010 1192234 . - . ID=gene-PUW34_05620;Name=PUW34_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05620 CP118122.1 Protein Homology CDS 1192010 1192234 . - 0 ID=cds-WJG97951.1;Parent=gene-PUW34_05620;Dbxref=NCBI_GP:WJG97951.1;Name=WJG97951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=PUW34_05620;product=DUF2594 family protein;protein_id=WJG97951.1;transl_table=11 CP118122.1 Genbank pseudogene 1192231 1192384 . - . ID=gene-PUW34_05625;Name=PUW34_05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05625;pseudo=true CP118122.1 Protein Homology CDS 1192231 1192384 . - 0 ID=cds-PUW34_05625;Parent=gene-PUW34_05625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=PUW34_05625;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1192696 1193352 . + . ID=gene-PUW34_05630;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=PUW34_05630 CP118122.1 Protein Homology CDS 1192696 1193352 . + 0 ID=cds-WJG97952.1;Parent=gene-PUW34_05630;Dbxref=NCBI_GP:WJG97952.1;Name=WJG97952.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=PUW34_05630;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WJG97952.1;transl_table=11 CP118122.1 Genbank gene 1193349 1195181 . + . ID=gene-PUW34_05635;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=PUW34_05635 CP118122.1 Protein Homology CDS 1193349 1195181 . + 0 ID=cds-WJG97953.1;Parent=gene-PUW34_05635;Dbxref=NCBI_GP:WJG97953.1;Name=WJG97953.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=PUW34_05635;product=excinuclease ABC subunit UvrC;protein_id=WJG97953.1;transl_table=11 CP118122.1 Genbank gene 1195238 1195786 . + . ID=gene-PUW34_05640;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=PUW34_05640 CP118122.1 Protein Homology CDS 1195238 1195786 . + 0 ID=cds-WJG97954.1;Parent=gene-PUW34_05640;Dbxref=NCBI_GP:WJG97954.1;Name=WJG97954.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=PUW34_05640;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WJG97954.1;transl_table=11 CP118122.1 Genbank gene 1195938 1196013 . + . ID=gene-PUW34_05645;Name=PUW34_05645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_05645 CP118122.1 tRNAscan-SE tRNA 1195938 1196013 . + . ID=rna-PUW34_05645;Parent=gene-PUW34_05645;anticodon=(pos:1195971..1195973);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_05645;product=tRNA-Gly CP118122.1 tRNAscan-SE exon 1195938 1196013 . + . ID=exon-PUW34_05645-1;Parent=rna-PUW34_05645;anticodon=(pos:1195971..1195973);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_05645;product=tRNA-Gly CP118122.1 Genbank gene 1196065 1196138 . + . ID=gene-PUW34_05650;Name=PUW34_05650;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_05650 CP118122.1 tRNAscan-SE tRNA 1196065 1196138 . + . ID=rna-PUW34_05650;Parent=gene-PUW34_05650;anticodon=(pos:1196097..1196099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_05650;product=tRNA-Cys CP118122.1 tRNAscan-SE exon 1196065 1196138 . + . ID=exon-PUW34_05650-1;Parent=rna-PUW34_05650;anticodon=(pos:1196097..1196099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_05650;product=tRNA-Cys CP118122.1 Genbank gene 1196150 1196236 . + . ID=gene-PUW34_05655;Name=PUW34_05655;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_05655 CP118122.1 tRNAscan-SE tRNA 1196150 1196236 . + . ID=rna-PUW34_05655;Parent=gene-PUW34_05655;anticodon=(pos:1196184..1196186);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_05655;product=tRNA-Leu CP118122.1 tRNAscan-SE exon 1196150 1196236 . + . ID=exon-PUW34_05655-1;Parent=rna-PUW34_05655;anticodon=(pos:1196184..1196186);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_05655;product=tRNA-Leu CP118122.1 Genbank pseudogene 1196485 1196816 . + . ID=gene-PUW34_05660;Name=PUW34_05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05660;pseudo=true CP118122.1 Protein Homology CDS 1196485 1196816 . + 0 ID=cds-PUW34_05660;Parent=gene-PUW34_05660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=PUW34_05660;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1197030 1198469 . + . ID=gene-PUW34_05665;Name=PUW34_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05665 CP118122.1 Protein Homology CDS 1197030 1198469 . + 0 ID=cds-WJG97955.1;Parent=gene-PUW34_05665;Dbxref=NCBI_GP:WJG97955.1;Name=WJG97955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=PUW34_05665;product=SH3 domain-containing protein;protein_id=WJG97955.1;transl_table=11 CP118122.1 Genbank pseudogene 1198682 1199007 . + . ID=gene-PUW34_05670;Name=PUW34_05670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05670;pseudo=true CP118122.1 Protein Homology CDS 1198682 1199007 . + 0 ID=cds-PUW34_05670;Parent=gene-PUW34_05670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=PUW34_05670;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1199246 1199911 . + . ID=gene-PUW34_05675;Name=PUW34_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05675 CP118122.1 Protein Homology CDS 1199246 1199911 . + 0 ID=cds-WJG97956.1;Parent=gene-PUW34_05675;Dbxref=NCBI_GP:WJG97956.1;Name=WJG97956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=PUW34_05675;product=YecA family protein;protein_id=WJG97956.1;transl_table=11 CP118122.1 Genbank gene 1199986 1201206 . - . ID=gene-PUW34_05680;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=PUW34_05680 CP118122.1 Protein Homology CDS 1199986 1201206 . - 0 ID=cds-WJG97957.1;Parent=gene-PUW34_05680;Dbxref=NCBI_GP:WJG97957.1;Name=WJG97957.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=PUW34_05680;product=tyrosine transporter TyrP;protein_id=WJG97957.1;transl_table=11 CP118122.1 Genbank gene 1201433 1201672 . + . ID=gene-PUW34_05685;Name=PUW34_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05685 CP118122.1 Protein Homology CDS 1201433 1201672 . + 0 ID=cds-WJG97958.1;Parent=gene-PUW34_05685;Dbxref=NCBI_GP:WJG97958.1;Name=WJG97958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=PUW34_05685;product=YecH family protein;protein_id=WJG97958.1;transl_table=11 CP118122.1 Genbank gene 1201718 1202215 . - . ID=gene-PUW34_05690;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=PUW34_05690 CP118122.1 Protein Homology CDS 1201718 1202215 . - 0 ID=cds-WJG97959.1;Parent=gene-PUW34_05690;Dbxref=NCBI_GP:WJG97959.1;Name=WJG97959.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=PUW34_05690;product=non-heme ferritin;protein_id=WJG97959.1;transl_table=11 CP118122.1 Genbank gene 1202455 1202790 . - . ID=gene-PUW34_05695;Name=PUW34_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05695 CP118122.1 Protein Homology CDS 1202455 1202790 . - 0 ID=cds-WJG97960.1;Parent=gene-PUW34_05695;Dbxref=NCBI_GP:WJG97960.1;Name=WJG97960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=PUW34_05695;product=YecR-like lipofamily protein;protein_id=WJG97960.1;transl_table=11 CP118122.1 Genbank gene 1203046 1203684 . + . ID=gene-PUW34_05700;Name=PUW34_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05700 CP118122.1 Protein Homology CDS 1203046 1203684 . + 0 ID=cds-WJG97961.1;Parent=gene-PUW34_05700;Dbxref=NCBI_GP:WJG97961.1;Name=WJG97961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=PUW34_05700;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WJG97961.1;transl_table=11 CP118122.1 Genbank gene 1203863 1204366 . - . ID=gene-PUW34_05705;Name=PUW34_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05705 CP118122.1 Protein Homology CDS 1203863 1204366 . - 0 ID=cds-WJG97962.1;Parent=gene-PUW34_05705;Dbxref=NCBI_GP:WJG97962.1;Name=WJG97962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=PUW34_05705;product=non-heme ferritin-like protein;protein_id=WJG97962.1;transl_table=11 CP118122.1 Genbank gene 1204916 1205473 . + . ID=gene-PUW34_05710;Name=PUW34_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05710 CP118122.1 Protein Homology CDS 1204916 1205473 . + 0 ID=cds-WJG97963.1;Parent=gene-PUW34_05710;Dbxref=NCBI_GP:WJG97963.1;Name=WJG97963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=PUW34_05710;product=DJ-1/PfpI family protein;protein_id=WJG97963.1;transl_table=11 CP118122.1 Genbank pseudogene 1205702 1205884 . + . ID=gene-PUW34_05715;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=PUW34_05715;pseudo=true CP118122.1 Protein Homology CDS 1205702 1205884 . + 0 ID=cds-PUW34_05715;Parent=gene-PUW34_05715;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=PUW34_05715;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1206107 1206910 . + . ID=gene-PUW34_05720;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=PUW34_05720 CP118122.1 Protein Homology CDS 1206107 1206910 . + 0 ID=cds-WJG97964.1;Parent=gene-PUW34_05720;Dbxref=NCBI_GP:WJG97964.1;Name=WJG97964.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=PUW34_05720;product=trehalose-phosphatase;protein_id=WJG97964.1;transl_table=11 CP118122.1 Genbank gene 1206885 1208306 . + . ID=gene-PUW34_05725;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=PUW34_05725 CP118122.1 Protein Homology CDS 1206885 1208306 . + 0 ID=cds-WJG97965.1;Parent=gene-PUW34_05725;Dbxref=NCBI_GP:WJG97965.1;Name=WJG97965.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=PUW34_05725;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WJG97965.1;transl_table=11 CP118122.1 Genbank gene 1208324 1208752 . - . ID=gene-PUW34_05730;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=PUW34_05730 CP118122.1 Protein Homology CDS 1208324 1208752 . - 0 ID=cds-WJG97966.1;Parent=gene-PUW34_05730;Dbxref=NCBI_GP:WJG97966.1;Name=WJG97966.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=PUW34_05730;product=universal stress protein UspC;protein_id=WJG97966.1;transl_table=11 CP118122.1 Genbank gene 1208749 1208865 . - . ID=gene-PUW34_05735;Name=PUW34_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05735 CP118122.1 Protein Homology CDS 1208749 1208865 . - 0 ID=cds-WJG97967.1;Parent=gene-PUW34_05735;Dbxref=NCBI_GP:WJG97967.1;Name=WJG97967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=PUW34_05735;product=hypothetical protein;protein_id=WJG97967.1;transl_table=11 CP118122.1 Genbank gene 1209548 1209889 . + . ID=gene-PUW34_05740;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=PUW34_05740 CP118122.1 Protein Homology CDS 1209548 1209889 . + 0 ID=cds-WJG97968.1;Parent=gene-PUW34_05740;Dbxref=NCBI_GP:WJG97968.1;Name=WJG97968.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=PUW34_05740;product=flagellar transcriptional regulator FlhD;protein_id=WJG97968.1;transl_table=11 CP118122.1 Genbank gene 1209886 1210470 . + . ID=gene-PUW34_05745;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=PUW34_05745 CP118122.1 Protein Homology CDS 1209886 1210470 . + 0 ID=cds-WJG97969.1;Parent=gene-PUW34_05745;Dbxref=NCBI_GP:WJG97969.1;Name=WJG97969.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=PUW34_05745;product=flagellar transcriptional regulator FlhC;protein_id=WJG97969.1;transl_table=11 CP118122.1 Genbank gene 1210595 1211482 . + . ID=gene-PUW34_05750;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=PUW34_05750 CP118122.1 Protein Homology CDS 1210595 1211482 . + 0 ID=cds-WJG97970.1;Parent=gene-PUW34_05750;Dbxref=NCBI_GP:WJG97970.1;Name=WJG97970.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=PUW34_05750;product=flagellar motor stator protein MotA;protein_id=WJG97970.1;transl_table=11 CP118122.1 Genbank gene 1211479 1212408 . + . ID=gene-PUW34_05755;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=PUW34_05755 CP118122.1 Protein Homology CDS 1211479 1212408 . + 0 ID=cds-WJG97971.1;Parent=gene-PUW34_05755;Dbxref=NCBI_GP:WJG97971.1;Name=WJG97971.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=PUW34_05755;product=flagellar motor protein MotB;protein_id=WJG97971.1;transl_table=11 CP118122.1 Genbank gene 1212413 1214428 . + . ID=gene-PUW34_05760;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=PUW34_05760 CP118122.1 Protein Homology CDS 1212413 1214428 . + 0 ID=cds-WJG97972.1;Parent=gene-PUW34_05760;Dbxref=NCBI_GP:WJG97972.1;Name=WJG97972.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=PUW34_05760;product=chemotaxis protein CheA;protein_id=WJG97972.1;transl_table=11 CP118122.1 Genbank gene 1214449 1214952 . + . ID=gene-PUW34_05765;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=PUW34_05765 CP118122.1 Protein Homology CDS 1214449 1214952 . + 0 ID=cds-WJG97973.1;Parent=gene-PUW34_05765;Dbxref=NCBI_GP:WJG97973.1;Name=WJG97973.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=PUW34_05765;product=chemotaxis protein CheW;protein_id=WJG97973.1;transl_table=11 CP118122.1 Genbank pseudogene 1215189 1216848 . + . ID=gene-PUW34_05770;Name=tar;gbkey=Gene;gene=tar;gene_biotype=pseudogene;locus_tag=PUW34_05770;pseudo=true CP118122.1 Protein Homology CDS 1215189 1216848 . + 0 ID=cds-PUW34_05770;Parent=gene-PUW34_05770;Note=frameshifted;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=PUW34_05770;product=methyl-accepting chemotaxis protein II;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1217002 1217868 . + . ID=gene-PUW34_05775;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=PUW34_05775 CP118122.1 Protein Homology CDS 1217002 1217868 . + 0 ID=cds-WJG97974.1;Parent=gene-PUW34_05775;Dbxref=NCBI_GP:WJG97974.1;Name=WJG97974.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=PUW34_05775;product=protein-glutamate O-methyltransferase CheR;protein_id=WJG97974.1;transl_table=11 CP118122.1 Genbank gene 1217865 1218914 . + . ID=gene-PUW34_05780;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=PUW34_05780 CP118122.1 Protein Homology CDS 1217865 1218914 . + 0 ID=cds-WJG97975.1;Parent=gene-PUW34_05780;Dbxref=NCBI_GP:WJG97975.1;Name=WJG97975.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=PUW34_05780;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WJG97975.1;transl_table=11 CP118122.1 Genbank gene 1218932 1219321 . + . ID=gene-PUW34_05785;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=PUW34_05785 CP118122.1 Protein Homology CDS 1218932 1219321 . + 0 ID=cds-WJG97976.1;Parent=gene-PUW34_05785;Dbxref=NCBI_GP:WJG97976.1;Name=WJG97976.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=PUW34_05785;product=chemotaxis response regulator CheY;protein_id=WJG97976.1;transl_table=11 CP118122.1 Genbank pseudogene 1219332 1219975 . + . ID=gene-PUW34_05790;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=pseudogene;locus_tag=PUW34_05790;pseudo=true CP118122.1 Protein Homology CDS 1219332 1219975 . + 0 ID=cds-PUW34_05790;Parent=gene-PUW34_05790;Note=frameshifted;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=PUW34_05790;product=protein phosphatase CheZ;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1220169 1221123 . + . ID=gene-PUW34_05795;Name=PUW34_05795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05795;pseudo=true CP118122.1 Protein Homology CDS 1220169 1221123 . + 0 ID=cds-PUW34_05795;Parent=gene-PUW34_05795;Note=frameshifted;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=PUW34_05795;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1221116 1223194 . + . ID=gene-PUW34_05800;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=pseudogene;locus_tag=PUW34_05800;pseudo=true CP118122.1 Protein Homology CDS 1221116 1223194 . + 0 ID=cds-PUW34_05800;Parent=gene-PUW34_05800;Note=internal stop;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=PUW34_05800;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1223194 1223586 . + . ID=gene-PUW34_05805;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=protein_coding;locus_tag=PUW34_05805 CP118122.1 Protein Homology CDS 1223194 1223586 . + 0 ID=cds-WJG97977.1;Parent=gene-PUW34_05805;Dbxref=NCBI_GP:WJG97977.1;Name=WJG97977.1;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=PUW34_05805;product=flagellar protein FlhE;protein_id=WJG97977.1;transl_table=11 CP118122.1 Genbank gene 1223823 1224962 . + . ID=gene-PUW34_05810;Name=PUW34_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05810 CP118122.1 Protein Homology CDS 1223823 1224962 . + 0 ID=cds-WJG97978.1;Parent=gene-PUW34_05810;Dbxref=NCBI_GP:WJG97978.1;Name=WJG97978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=PUW34_05810;product=glycoside hydrolase family 105 protein;protein_id=WJG97978.1;transl_table=11 CP118122.1 Genbank pseudogene 1225016 1226886 . - . ID=gene-PUW34_05815;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=PUW34_05815;pseudo=true CP118122.1 Protein Homology CDS 1225016 1226886 . - 0 ID=cds-PUW34_05815;Parent=gene-PUW34_05815;Note=frameshifted;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=PUW34_05815;product=penicillin-binding protein 2;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1227075 1228808 . - . ID=gene-PUW34_05820;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=PUW34_05820 CP118122.1 Protein Homology CDS 1227075 1228808 . - 0 ID=cds-WJG97979.1;Parent=gene-PUW34_05820;Dbxref=NCBI_GP:WJG97979.1;Name=WJG97979.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=PUW34_05820;product=arginine--tRNA ligase;protein_id=WJG97979.1;transl_table=11 CP118122.1 Genbank gene 1229045 1229614 . + . ID=gene-PUW34_05825;Name=PUW34_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05825 CP118122.1 Protein Homology CDS 1229045 1229614 . + 0 ID=cds-WJG97980.1;Parent=gene-PUW34_05825;Dbxref=NCBI_GP:WJG97980.1;Name=WJG97980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=PUW34_05825;product=VOC family protein;protein_id=WJG97980.1;transl_table=11 CP118122.1 Genbank gene 1229634 1230380 . + . ID=gene-PUW34_05830;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=PUW34_05830 CP118122.1 Protein Homology CDS 1229634 1230380 . + 0 ID=cds-WJG97981.1;Parent=gene-PUW34_05830;Dbxref=NCBI_GP:WJG97981.1;Name=WJG97981.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=PUW34_05830;product=copper homeostasis protein CutC;protein_id=WJG97981.1;transl_table=11 CP118122.1 Genbank gene 1230616 1231587 . - . ID=gene-PUW34_05835;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=PUW34_05835 CP118122.1 Protein Homology CDS 1230616 1231587 . - 0 ID=cds-WJG97982.1;Parent=gene-PUW34_05835;Dbxref=NCBI_GP:WJG97982.1;Name=WJG97982.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=PUW34_05835;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WJG97982.1;transl_table=11 CP118122.1 Genbank gene 1231584 1232327 . - . ID=gene-PUW34_05840;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=PUW34_05840 CP118122.1 Protein Homology CDS 1231584 1232327 . - 0 ID=cds-WJG97983.1;Parent=gene-PUW34_05840;Dbxref=NCBI_GP:WJG97983.1;Name=WJG97983.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=PUW34_05840;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WJG97983.1;transl_table=11 CP118122.1 Genbank gene 1232368 1232763 . - . ID=gene-PUW34_05845;Name=PUW34_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05845 CP118122.1 Protein Homology CDS 1232368 1232763 . - 0 ID=cds-WJG97984.1;Parent=gene-PUW34_05845;Dbxref=NCBI_GP:WJG97984.1;Name=WJG97984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=PUW34_05845;product=MAPEG family protein;protein_id=WJG97984.1;transl_table=11 CP118122.1 Genbank gene 1232816 1233634 . - . ID=gene-PUW34_05850;Name=PUW34_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05850 CP118122.1 Protein Homology CDS 1232816 1233634 . - 0 ID=cds-WJG97985.1;Parent=gene-PUW34_05850;Dbxref=NCBI_GP:WJG97985.1;Name=WJG97985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=PUW34_05850;product=DUF72 domain-containing protein;protein_id=WJG97985.1;transl_table=11 CP118122.1 Genbank gene 1233631 1234197 . - . ID=gene-PUW34_05855;Name=PUW34_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05855 CP118122.1 Protein Homology CDS 1233631 1234197 . - 0 ID=cds-WJG97986.1;Parent=gene-PUW34_05855;Dbxref=NCBI_GP:WJG97986.1;Name=WJG97986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=PUW34_05855;product=hydrolase;protein_id=WJG97986.1;transl_table=11 CP118122.1 Genbank gene 1234522 1236294 . + . ID=gene-PUW34_05860;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=PUW34_05860 CP118122.1 Protein Homology CDS 1234522 1236294 . + 0 ID=cds-WJG97987.1;Parent=gene-PUW34_05860;Dbxref=NCBI_GP:WJG97987.1;Name=WJG97987.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=PUW34_05860;product=aspartate--tRNA ligase;protein_id=WJG97987.1;transl_table=11 CP118122.1 Genbank gene 1236397 1236849 . + . ID=gene-PUW34_05865;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=PUW34_05865 CP118122.1 Protein Homology CDS 1236397 1236849 . + 0 ID=cds-WJG97988.1;Parent=gene-PUW34_05865;Dbxref=NCBI_GP:WJG97988.1;Name=WJG97988.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=PUW34_05865;product=dihydroneopterin triphosphate diphosphatase;protein_id=WJG97988.1;transl_table=11 CP118122.1 Genbank gene 1236879 1237619 . + . ID=gene-PUW34_05870;Name=PUW34_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05870 CP118122.1 Protein Homology CDS 1236879 1237619 . + 0 ID=cds-WJG97989.1;Parent=gene-PUW34_05870;Dbxref=NCBI_GP:WJG97989.1;Name=WJG97989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=PUW34_05870;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WJG97989.1;transl_table=11 CP118122.1 Genbank gene 1237656 1238177 . + . ID=gene-PUW34_05875;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=PUW34_05875 CP118122.1 Protein Homology CDS 1237656 1238177 . + 0 ID=cds-WJG97990.1;Parent=gene-PUW34_05875;Dbxref=NCBI_GP:WJG97990.1;Name=WJG97990.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=PUW34_05875;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WJG97990.1;transl_table=11 CP118122.1 Genbank gene 1238179 1238778 . - . ID=gene-PUW34_05880;Name=PUW34_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05880 CP118122.1 Protein Homology CDS 1238179 1238778 . - 0 ID=cds-WJG97991.1;Parent=gene-PUW34_05880;Dbxref=NCBI_GP:WJG97991.1;Name=WJG97991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=PUW34_05880;product=YebB family permuted papain-like enzyme;protein_id=WJG97991.1;transl_table=11 CP118122.1 Genbank gene 1238987 1239679 . + . ID=gene-PUW34_05885;Name=PUW34_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05885 CP118122.1 Protein Homology CDS 1238987 1239679 . + 0 ID=cds-WJG97992.1;Parent=gene-PUW34_05885;Dbxref=NCBI_GP:WJG97992.1;Name=WJG97992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=PUW34_05885;product=hypothetical protein;protein_id=WJG97992.1;transl_table=11 CP118122.1 Genbank gene 1240039 1240650 . + . ID=gene-PUW34_05890;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=PUW34_05890 CP118122.1 Protein Homology CDS 1240039 1240650 . + 0 ID=cds-WJG97993.1;Parent=gene-PUW34_05890;Dbxref=NCBI_GP:WJG97993.1;Name=WJG97993.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=PUW34_05890;product=Holliday junction branch migration protein RuvA;protein_id=WJG97993.1;transl_table=11 CP118122.1 Genbank gene 1240659 1241669 . + . ID=gene-PUW34_05895;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=PUW34_05895 CP118122.1 Protein Homology CDS 1240659 1241669 . + 0 ID=cds-WJG97994.1;Parent=gene-PUW34_05895;Dbxref=NCBI_GP:WJG97994.1;Name=WJG97994.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=PUW34_05895;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WJG97994.1;transl_table=11 CP118122.1 Genbank gene 1241748 1242533 . - . ID=gene-PUW34_05900;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=PUW34_05900 CP118122.1 Protein Homology CDS 1241748 1242533 . - 0 ID=cds-WJG97995.1;Parent=gene-PUW34_05900;Dbxref=NCBI_GP:WJG97995.1;Name=WJG97995.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=PUW34_05900;product=zinc ABC transporter permease subunit ZnuB;protein_id=WJG97995.1;transl_table=11 CP118122.1 Genbank pseudogene 1242530 1243284 . - . ID=gene-PUW34_05905;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=pseudogene;locus_tag=PUW34_05905;pseudo=true CP118122.1 Protein Homology CDS 1242530 1243284 . - 0 ID=cds-PUW34_05905;Parent=gene-PUW34_05905;Note=frameshifted;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=PUW34_05905;product=zinc ABC transporter ATP-binding protein ZnuC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1243363 1244307 . + . ID=gene-PUW34_05910;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=PUW34_05910 CP118122.1 Protein Homology CDS 1243363 1244307 . + 0 ID=cds-WJG97996.1;Parent=gene-PUW34_05910;Dbxref=NCBI_GP:WJG97996.1;Name=WJG97996.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=PUW34_05910;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WJG97996.1;transl_table=11 CP118122.1 Genbank gene 1244323 1245642 . + . ID=gene-PUW34_05915;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=PUW34_05915 CP118122.1 Protein Homology CDS 1244323 1245642 . + 0 ID=cds-WJG97997.1;Parent=gene-PUW34_05915;Dbxref=NCBI_GP:WJG97997.1;Name=WJG97997.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=PUW34_05915;product=murein DD-endopeptidase MepM;protein_id=WJG97997.1;transl_table=11 CP118122.1 Genbank gene 1245759 1246730 . + . ID=gene-PUW34_05920;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=PUW34_05920 CP118122.1 Protein Homology CDS 1245759 1246730 . + 0 ID=cds-WJG97998.1;Parent=gene-PUW34_05920;Dbxref=NCBI_GP:WJG97998.1;Name=WJG97998.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=PUW34_05920;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WJG97998.1;transl_table=11 CP118122.1 Genbank pseudogene 1246803 1248244 . - . ID=gene-PUW34_05925;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=pseudogene;locus_tag=PUW34_05925;pseudo=true CP118122.1 Protein Homology CDS 1246803 1248244 . - 0 ID=cds-PUW34_05925;Parent=gene-PUW34_05925;Note=frameshifted;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=PUW34_05925;product=pyruvate kinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1248368 1249237 . - . ID=gene-PUW34_05930;Name=PUW34_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05930 CP118122.1 Protein Homology CDS 1248368 1249237 . - 0 ID=cds-WJG97999.1;Parent=gene-PUW34_05930;Dbxref=NCBI_GP:WJG97999.1;Name=WJG97999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=PUW34_05930;product=MurR/RpiR family transcriptional regulator;protein_id=WJG97999.1;transl_table=11 CP118122.1 Genbank gene 1249335 1249469 . + . ID=gene-PUW34_05935;Name=PUW34_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05935 CP118122.1 GeneMarkS-2+ CDS 1249335 1249469 . + 0 ID=cds-WJG98000.1;Parent=gene-PUW34_05935;Dbxref=NCBI_GP:WJG98000.1;Name=WJG98000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_05935;product=hypothetical protein;protein_id=WJG98000.1;transl_table=11 CP118122.1 Genbank gene 1249578 1251053 . + . ID=gene-PUW34_05940;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=PUW34_05940 CP118122.1 Protein Homology CDS 1249578 1251053 . + 0 ID=cds-WJG98001.1;Parent=gene-PUW34_05940;Dbxref=NCBI_GP:WJG98001.1;Name=WJG98001.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=PUW34_05940;product=glucose-6-phosphate dehydrogenase;protein_id=WJG98001.1;transl_table=11 CP118122.1 Genbank gene 1251288 1253099 . + . ID=gene-PUW34_05945;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=PUW34_05945 CP118122.1 Protein Homology CDS 1251288 1253099 . + 0 ID=cds-WJG98002.1;Parent=gene-PUW34_05945;Dbxref=NCBI_GP:WJG98002.1;Name=WJG98002.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=PUW34_05945;product=phosphogluconate dehydratase;protein_id=WJG98002.1;transl_table=11 CP118122.1 Genbank gene 1253137 1253778 . + . ID=gene-PUW34_05950;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=PUW34_05950 CP118122.1 Protein Homology CDS 1253137 1253778 . + 0 ID=cds-WJG98003.1;Parent=gene-PUW34_05950;Dbxref=NCBI_GP:WJG98003.1;Name=WJG98003.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=PUW34_05950;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WJG98003.1;transl_table=11 CP118122.1 Genbank gene 1253878 1255056 . - . ID=gene-PUW34_05955;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=PUW34_05955 CP118122.1 Protein Homology CDS 1253878 1255056 . - 0 ID=cds-WJG98004.1;Parent=gene-PUW34_05955;Dbxref=NCBI_GP:WJG98004.1;Name=WJG98004.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=PUW34_05955;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WJG98004.1;transl_table=11 CP118122.1 Genbank gene 1255187 1255477 . + . ID=gene-PUW34_05960;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=PUW34_05960 CP118122.1 Protein Homology CDS 1255187 1255477 . + 0 ID=cds-WJG98005.1;Parent=gene-PUW34_05960;Dbxref=NCBI_GP:WJG98005.1;Name=WJG98005.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=PUW34_05960;product=DNA damage-inducible protein YebG;protein_id=WJG98005.1;transl_table=11 CP118122.1 Genbank gene 1255545 1255898 . + . ID=gene-PUW34_05965;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=PUW34_05965 CP118122.1 Protein Homology CDS 1255545 1255898 . + 0 ID=cds-WJG98006.1;Parent=gene-PUW34_05965;Dbxref=NCBI_GP:WJG98006.1;Name=WJG98006.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=PUW34_05965;product=protein YebF;protein_id=WJG98006.1;transl_table=11 CP118122.1 Genbank pseudogene 1255992 1256650 . + . ID=gene-PUW34_05970;Name=PUW34_05970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_05970;pseudo=true CP118122.1 Protein Homology CDS 1255992 1256650 . + 0 ID=cds-PUW34_05970;Parent=gene-PUW34_05970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=PUW34_05970;product=tellurite resistance TerB family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1256863 1258914 . + . ID=gene-PUW34_05975;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=PUW34_05975 CP118122.1 Protein Homology CDS 1256863 1258914 . + 0 ID=cds-WJG98007.1;Parent=gene-PUW34_05975;Dbxref=NCBI_GP:WJG98007.1;Name=WJG98007.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=PUW34_05975;product=oligopeptidase B;protein_id=WJG98007.1;transl_table=11 CP118122.1 Genbank gene 1258951 1259649 . - . ID=gene-PUW34_05980;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=PUW34_05980 CP118122.1 Protein Homology CDS 1258951 1259649 . - 0 ID=cds-WJG98008.1;Parent=gene-PUW34_05980;Dbxref=NCBI_GP:WJG98008.1;Name=WJG98008.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=PUW34_05980;product=exodeoxyribonuclease X;protein_id=WJG98008.1;transl_table=11 CP118122.1 Genbank gene 1259673 1260329 . - . ID=gene-PUW34_05985;Name=PUW34_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05985 CP118122.1 Protein Homology CDS 1259673 1260329 . - 0 ID=cds-WJG98009.1;Parent=gene-PUW34_05985;Dbxref=NCBI_GP:WJG98009.1;Name=WJG98009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=PUW34_05985;product=carbon-nitrogen hydrolase family protein;protein_id=WJG98009.1;transl_table=11 CP118122.1 Genbank gene 1260437 1260667 . - . ID=gene-PUW34_05990;Name=PUW34_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_05990 CP118122.1 Protein Homology CDS 1260437 1260667 . - 0 ID=cds-WJG98010.1;Parent=gene-PUW34_05990;Dbxref=NCBI_GP:WJG98010.1;Name=WJG98010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=PUW34_05990;product=DNA polymerase III subunit theta;protein_id=WJG98010.1;transl_table=11 CP118122.1 Genbank gene 1260805 1261179 . + . ID=gene-PUW34_05995;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=PUW34_05995 CP118122.1 Protein Homology CDS 1260805 1261179 . + 0 ID=cds-WJG98011.1;Parent=gene-PUW34_05995;Dbxref=NCBI_GP:WJG98011.1;Name=WJG98011.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=PUW34_05995;product=CopC domain-containing protein YobA;protein_id=WJG98011.1;transl_table=11 CP118122.1 Genbank gene 1261180 1262055 . + . ID=gene-PUW34_06000;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=PUW34_06000 CP118122.1 Protein Homology CDS 1261180 1262055 . + 0 ID=cds-WJG98012.1;Parent=gene-PUW34_06000;Dbxref=NCBI_GP:WJG98012.1;Name=WJG98012.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=PUW34_06000;product=copper homeostasis membrane protein CopD;protein_id=WJG98012.1;transl_table=11 CP118122.1 Genbank gene 1262072 1262425 . + . ID=gene-PUW34_06005;Name=PUW34_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06005 CP118122.1 Protein Homology CDS 1262072 1262425 . + 0 ID=cds-WJG98013.1;Parent=gene-PUW34_06005;Dbxref=NCBI_GP:WJG98013.1;Name=WJG98013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=PUW34_06005;product=YebY family protein;protein_id=WJG98013.1;transl_table=11 CP118122.1 Genbank gene 1262808 1263887 . - . ID=gene-PUW34_06010;Name=PUW34_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06010 CP118122.1 Protein Homology CDS 1262808 1263887 . - 0 ID=cds-WJG98014.1;Parent=gene-PUW34_06010;Dbxref=NCBI_GP:WJG98014.1;Name=WJG98014.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=PUW34_06010;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WJG98014.1;transl_table=11 CP118122.1 Genbank gene 1263862 1264140 . - . ID=gene-PUW34_06015;Name=PUW34_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06015 CP118122.1 Protein Homology CDS 1263862 1264140 . - 0 ID=cds-WJG98015.1;Parent=gene-PUW34_06015;Dbxref=NCBI_GP:WJG98015.1;Name=WJG98015.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575998.1;locus_tag=PUW34_06015;product=excisionase;protein_id=WJG98015.1;transl_table=11 CP118122.1 Genbank gene 1264201 1264629 . - . ID=gene-PUW34_06020;Name=PUW34_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06020 CP118122.1 Protein Homology CDS 1264201 1264629 . - 0 ID=cds-WJG98016.1;Parent=gene-PUW34_06020;Dbxref=NCBI_GP:WJG98016.1;Name=WJG98016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743304.1;locus_tag=PUW34_06020;product=hypothetical protein;protein_id=WJG98016.1;transl_table=11 CP118122.1 Genbank gene 1264728 1264913 . - . ID=gene-PUW34_06025;Name=PUW34_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06025 CP118122.1 Protein Homology CDS 1264728 1264913 . - 0 ID=cds-WJG98017.1;Parent=gene-PUW34_06025;Dbxref=NCBI_GP:WJG98017.1;Name=WJG98017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280163.1;locus_tag=PUW34_06025;product=DUF1187 family protein;protein_id=WJG98017.1;transl_table=11 CP118122.1 Genbank gene 1264960 1265790 . - . ID=gene-PUW34_06030;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=PUW34_06030 CP118122.1 Protein Homology CDS 1264960 1265790 . - 0 ID=cds-WJG98933.1;Parent=gene-PUW34_06030;Dbxref=NCBI_GP:WJG98933.1;Name=WJG98933.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126028.1;locus_tag=PUW34_06030;product=recombination protein RecT;protein_id=WJG98933.1;transl_table=11 CP118122.1 Genbank gene 1265783 1268473 . - . ID=gene-PUW34_06035;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=PUW34_06035 CP118122.1 Protein Homology CDS 1265783 1268473 . - 0 ID=cds-WJG98018.1;Parent=gene-PUW34_06035;Dbxref=NCBI_GP:WJG98018.1;Name=WJG98018.1;Ontology_term=GO:0090305,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' exodeoxyribonuclease activity|0051908||IEA;go_process=nucleic acid phosphodiester bond hydrolysis|0090305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=PUW34_06035;product=exodeoxyribonuclease VIII;protein_id=WJG98018.1;transl_table=11 CP118122.1 Genbank gene 1268614 1268949 . - . ID=gene-PUW34_06040;Name=PUW34_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06040 CP118122.1 Protein Homology CDS 1268614 1268949 . - 0 ID=cds-WJG98019.1;Parent=gene-PUW34_06040;Dbxref=NCBI_GP:WJG98019.1;Name=WJG98019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799630.1;locus_tag=PUW34_06040;product=hypothetical protein;protein_id=WJG98019.1;transl_table=11 CP118122.1 Genbank gene 1269025 1269231 . - . ID=gene-PUW34_06045;Name=PUW34_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06045 CP118122.1 Protein Homology CDS 1269025 1269231 . - 0 ID=cds-WJG98020.1;Parent=gene-PUW34_06045;Dbxref=NCBI_GP:WJG98020.1;Name=WJG98020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=PUW34_06045;product=cell division inhibitor protein;protein_id=WJG98020.1;transl_table=11 CP118122.1 Genbank gene 1269235 1269510 . - . ID=gene-PUW34_06050;Name=PUW34_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06050 CP118122.1 Protein Homology CDS 1269235 1269510 . - 0 ID=cds-WJG98021.1;Parent=gene-PUW34_06050;Dbxref=NCBI_GP:WJG98021.1;Name=WJG98021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103933.1;locus_tag=PUW34_06050;product=hypothetical protein;protein_id=WJG98021.1;transl_table=11 CP118122.1 Genbank gene 1269845 1270075 . + . ID=gene-PUW34_06055;Name=PUW34_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06055 CP118122.1 GeneMarkS-2+ CDS 1269845 1270075 . + 0 ID=cds-WJG98022.1;Parent=gene-PUW34_06055;Dbxref=NCBI_GP:WJG98022.1;Name=WJG98022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_06055;product=hypothetical protein;protein_id=WJG98022.1;transl_table=11 CP118122.1 Genbank gene 1270516 1270914 . - . ID=gene-PUW34_06060;Name=PUW34_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06060 CP118122.1 Protein Homology CDS 1270516 1270914 . - 0 ID=cds-WJG98023.1;Parent=gene-PUW34_06060;Dbxref=NCBI_GP:WJG98023.1;Name=WJG98023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574209.1;locus_tag=PUW34_06060;product=helix-turn-helix domain-containing protein;protein_id=WJG98023.1;transl_table=11 CP118122.1 Genbank gene 1271013 1271267 . + . ID=gene-PUW34_06065;Name=PUW34_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06065 CP118122.1 Protein Homology CDS 1271013 1271267 . + 0 ID=cds-WJG98024.1;Parent=gene-PUW34_06065;Dbxref=NCBI_GP:WJG98024.1;Name=WJG98024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462799.1;locus_tag=PUW34_06065;product=helix-turn-helix transcriptional regulator;protein_id=WJG98024.1;transl_table=11 CP118122.1 Genbank gene 1271254 1271748 . + . ID=gene-PUW34_06070;Name=PUW34_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06070 CP118122.1 Protein Homology CDS 1271254 1271748 . + 0 ID=cds-WJG98025.1;Parent=gene-PUW34_06070;Dbxref=NCBI_GP:WJG98025.1;Name=WJG98025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533160.1;locus_tag=PUW34_06070;product=toxin YdaT family protein;protein_id=WJG98025.1;transl_table=11 CP118122.1 Genbank gene 1271795 1272793 . + . ID=gene-PUW34_06075;Name=PUW34_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06075 CP118122.1 Protein Homology CDS 1271795 1272793 . + 0 ID=cds-WJG98026.1;Parent=gene-PUW34_06075;Dbxref=NCBI_GP:WJG98026.1;Name=WJG98026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729543.1;locus_tag=PUW34_06075;product=DUF1376 domain-containing protein;protein_id=WJG98026.1;transl_table=11 CP118122.1 Genbank gene 1272705 1273247 . + . ID=gene-PUW34_06080;Name=PUW34_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06080 CP118122.1 Protein Homology CDS 1272705 1273247 . + 0 ID=cds-WJG98027.1;Parent=gene-PUW34_06080;Dbxref=NCBI_GP:WJG98027.1;Name=WJG98027.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307798.1;locus_tag=PUW34_06080;product=replication protein P;protein_id=WJG98027.1;transl_table=11 CP118122.1 Genbank gene 1273260 1273655 . + . ID=gene-PUW34_06085;Name=PUW34_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06085 CP118122.1 Protein Homology CDS 1273260 1273655 . + 0 ID=cds-WJG98028.1;Parent=gene-PUW34_06085;Dbxref=NCBI_GP:WJG98028.1;Name=WJG98028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=PUW34_06085;product=DUF977 family protein;protein_id=WJG98028.1;transl_table=11 CP118122.1 Genbank gene 1273942 1275072 . - . ID=gene-PUW34_06090;Name=PUW34_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06090 CP118122.1 Protein Homology CDS 1273942 1275072 . - 0 ID=cds-WJG98029.1;Parent=gene-PUW34_06090;Dbxref=NCBI_GP:WJG98029.1;Name=WJG98029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=PUW34_06090;product=GGDEF domain-containing protein;protein_id=WJG98029.1;transl_table=11 CP118122.1 Genbank gene 1275469 1277448 . + . ID=gene-PUW34_06095;Name=PUW34_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06095 CP118122.1 Protein Homology CDS 1275469 1277448 . + 0 ID=cds-WJG98030.1;Parent=gene-PUW34_06095;Dbxref=NCBI_GP:WJG98030.1;Name=WJG98030.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078314.1;locus_tag=PUW34_06095;product=alkyl sulfatase dimerization domain-containing protein;protein_id=WJG98030.1;transl_table=11 CP118122.1 Genbank gene 1277767 1277865 . + . ID=gene-PUW34_06100;Name=PUW34_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06100 CP118122.1 Protein Homology CDS 1277767 1277865 . + 0 ID=cds-WJG98934.1;Parent=gene-PUW34_06100;Dbxref=NCBI_GP:WJG98934.1;Name=WJG98934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=PUW34_06100;product=hypothetical protein;protein_id=WJG98934.1;transl_table=11 CP118122.1 Genbank gene 1278167 1278385 . + . ID=gene-PUW34_06105;Name=PUW34_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06105 CP118122.1 Protein Homology CDS 1278167 1278385 . + 0 ID=cds-WJG98031.1;Parent=gene-PUW34_06105;Dbxref=NCBI_GP:WJG98031.1;Name=WJG98031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524708.1;locus_tag=PUW34_06105;product=hypothetical protein;protein_id=WJG98031.1;transl_table=11 CP118122.1 Genbank gene 1278449 1279048 . + . ID=gene-PUW34_06110;Name=PUW34_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06110 CP118122.1 Protein Homology CDS 1278449 1279048 . + 0 ID=cds-WJG98032.1;Parent=gene-PUW34_06110;Dbxref=NCBI_GP:WJG98032.1;Name=WJG98032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=PUW34_06110;product=DUF1367 family protein;protein_id=WJG98032.1;transl_table=11 CP118122.1 Genbank gene 1279051 1279272 . + . ID=gene-PUW34_06115;Name=PUW34_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06115 CP118122.1 Protein Homology CDS 1279051 1279272 . + 0 ID=cds-WJG98935.1;Parent=gene-PUW34_06115;Dbxref=NCBI_GP:WJG98935.1;Name=WJG98935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096570.1;locus_tag=PUW34_06115;product=recombination protein NinG;protein_id=WJG98935.1;transl_table=11 CP118122.1 Genbank pseudogene 1279269 1279405 . + . ID=gene-PUW34_06120;Name=PUW34_06120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06120;pseudo=true CP118122.1 Protein Homology CDS 1279269 1279405 . + 0 ID=cds-PUW34_06120;Parent=gene-PUW34_06120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971070.1;locus_tag=PUW34_06120;product=YlcG family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1279402 1280091 . + . ID=gene-PUW34_06125;Name=PUW34_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06125 CP118122.1 Protein Homology CDS 1279402 1280091 . + 0 ID=cds-WJG98033.1;Parent=gene-PUW34_06125;Dbxref=NCBI_GP:WJG98033.1;Name=WJG98033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151283.1;locus_tag=PUW34_06125;product=bacteriophage antitermination protein Q;protein_id=WJG98033.1;transl_table=11 CP118122.1 Genbank gene 1280185 1280712 . + . ID=gene-PUW34_06130;Name=PUW34_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06130 CP118122.1 Protein Homology CDS 1280185 1280712 . + 0 ID=cds-WJG98034.1;Parent=gene-PUW34_06130;Dbxref=NCBI_GP:WJG98034.1;Name=WJG98034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971762.1;locus_tag=PUW34_06130;product=hypothetical protein;protein_id=WJG98034.1;transl_table=11 CP118122.1 Genbank gene 1281086 1281535 . - . ID=gene-PUW34_06135;Name=PUW34_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06135 CP118122.1 Protein Homology CDS 1281086 1281535 . - 0 ID=cds-WJG98035.1;Parent=gene-PUW34_06135;Dbxref=NCBI_GP:WJG98035.1;Name=WJG98035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460000.1;locus_tag=PUW34_06135;product=hypothetical protein;protein_id=WJG98035.1;transl_table=11 CP118122.1 Genbank gene 1281896 1282582 . - . ID=gene-PUW34_06140;Name=gtgA;gbkey=Gene;gene=gtgA;gene_biotype=protein_coding;locus_tag=PUW34_06140 CP118122.1 Protein Homology CDS 1281896 1282582 . - 0 ID=cds-WJG98036.1;Parent=gene-PUW34_06140;Dbxref=NCBI_GP:WJG98036.1;Name=WJG98036.1;gbkey=CDS;gene=gtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461550.1;locus_tag=PUW34_06140;product=type III secretion system effector protease GtgA;protein_id=WJG98036.1;transl_table=11 CP118122.1 Genbank gene 1282858 1283187 . + . ID=gene-PUW34_06145;Name=PUW34_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06145 CP118122.1 Protein Homology CDS 1282858 1283187 . + 0 ID=cds-WJG98936.1;Parent=gene-PUW34_06145;Dbxref=NCBI_GP:WJG98936.1;Name=WJG98936.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461549.1;locus_tag=PUW34_06145;product=phage holin%2C lambda family;protein_id=WJG98936.1;transl_table=11 CP118122.1 Genbank gene 1283171 1283623 . + . ID=gene-PUW34_06150;Name=PUW34_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06150 CP118122.1 Protein Homology CDS 1283171 1283623 . + 0 ID=cds-WJG98037.1;Parent=gene-PUW34_06150;Dbxref=NCBI_GP:WJG98037.1;Name=WJG98037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460003.1;locus_tag=PUW34_06150;product=lysozyme;protein_id=WJG98037.1;transl_table=11 CP118122.1 Genbank gene 1283641 1284120 . + . ID=gene-PUW34_06155;Name=PUW34_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06155 CP118122.1 Protein Homology CDS 1283641 1284120 . + 0 ID=cds-WJG98038.1;Parent=gene-PUW34_06155;Dbxref=NCBI_GP:WJG98038.1;Name=WJG98038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460004.1;locus_tag=PUW34_06155;product=lysis protein;protein_id=WJG98038.1;transl_table=11 CP118122.1 Genbank pseudogene 1284328 1284860 . + . ID=gene-PUW34_06160;Name=PUW34_06160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06160;pseudo=true CP118122.1 Protein Homology CDS 1284328 1284860 . + 0 ID=cds-PUW34_06160;Parent=gene-PUW34_06160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460005.1;locus_tag=PUW34_06160;product=DUF1441 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1284817 1286955 . + . ID=gene-PUW34_06165;Name=PUW34_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06165 CP118122.1 Protein Homology CDS 1284817 1286955 . + 0 ID=cds-WJG98937.1;Parent=gene-PUW34_06165;Dbxref=NCBI_GP:WJG98937.1;Name=WJG98937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460006.1;locus_tag=PUW34_06165;product=phage terminase large subunit family protein;protein_id=WJG98937.1;transl_table=11 CP118122.1 Genbank gene 1286952 1287158 . + . ID=gene-PUW34_06170;Name=PUW34_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06170 CP118122.1 Protein Homology CDS 1286952 1287158 . + 0 ID=cds-WJG98039.1;Parent=gene-PUW34_06170;Dbxref=NCBI_GP:WJG98039.1;Name=WJG98039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196190.1;locus_tag=PUW34_06170;product=primosomal replication protein PriB/PriC domain protein;protein_id=WJG98039.1;transl_table=11 CP118122.1 Genbank gene 1287155 1288702 . + . ID=gene-PUW34_06175;Name=PUW34_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06175 CP118122.1 Protein Homology CDS 1287155 1288702 . + 0 ID=cds-WJG98040.1;Parent=gene-PUW34_06175;Dbxref=NCBI_GP:WJG98040.1;Name=WJG98040.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009205.1;locus_tag=PUW34_06175;product=phage portal protein;protein_id=WJG98040.1;transl_table=11 CP118122.1 Genbank pseudogene 1288626 1290706 . + . ID=gene-PUW34_06180;Name=PUW34_06180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06180;pseudo=true CP118122.1 Protein Homology CDS 1288626 1290706 . + 0 ID=cds-PUW34_06180;Parent=gene-PUW34_06180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460008.1;locus_tag=PUW34_06180;product=Clp protease ClpP;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1290797 1291120 . + . ID=gene-PUW34_06185;Name=PUW34_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06185 CP118122.1 Protein Homology CDS 1290797 1291120 . + 0 ID=cds-WJG98041.1;Parent=gene-PUW34_06185;Dbxref=NCBI_GP:WJG98041.1;Name=WJG98041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460009.1;locus_tag=PUW34_06185;product=DUF2190 family protein;protein_id=WJG98041.1;transl_table=11 CP118122.1 Genbank gene 1291113 1291412 . + . ID=gene-PUW34_06190;Name=PUW34_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06190 CP118122.1 Protein Homology CDS 1291113 1291412 . + 0 ID=cds-WJG98042.1;Parent=gene-PUW34_06190;Dbxref=NCBI_GP:WJG98042.1;Name=WJG98042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460010.1;locus_tag=PUW34_06190;product=ATP-binding protein;protein_id=WJG98042.1;transl_table=11 CP118122.1 Genbank gene 1291393 1291959 . + . ID=gene-PUW34_06195;Name=PUW34_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06195 CP118122.1 Protein Homology CDS 1291393 1291959 . + 0 ID=cds-WJG98043.1;Parent=gene-PUW34_06195;Dbxref=NCBI_GP:WJG98043.1;Name=WJG98043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460011.1;locus_tag=PUW34_06195;product=phage tail protein;protein_id=WJG98043.1;transl_table=11 CP118122.1 Genbank gene 1291956 1292357 . + . ID=gene-PUW34_06200;Name=PUW34_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06200 CP118122.1 Protein Homology CDS 1291956 1292357 . + 0 ID=cds-WJG98044.1;Parent=gene-PUW34_06200;Dbxref=NCBI_GP:WJG98044.1;Name=WJG98044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460012.1;locus_tag=PUW34_06200;product=phage minor tail U family protein;protein_id=WJG98044.1;transl_table=11 CP118122.1 Genbank gene 1292369 1293118 . + . ID=gene-PUW34_06205;Name=PUW34_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06205 CP118122.1 Protein Homology CDS 1292369 1293118 . + 0 ID=cds-WJG98045.1;Parent=gene-PUW34_06205;Dbxref=NCBI_GP:WJG98045.1;Name=WJG98045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460013.1;locus_tag=PUW34_06205;product=phage tail protein;protein_id=WJG98045.1;transl_table=11 CP118122.1 Genbank gene 1293164 1293562 . + . ID=gene-PUW34_06210;Name=PUW34_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06210 CP118122.1 Protein Homology CDS 1293164 1293562 . + 0 ID=cds-WJG98046.1;Parent=gene-PUW34_06210;Dbxref=NCBI_GP:WJG98046.1;Name=WJG98046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460014.1;locus_tag=PUW34_06210;product=phage minor tail protein G;protein_id=WJG98046.1;transl_table=11 CP118122.1 Genbank gene 1293559 1293888 . + . ID=gene-PUW34_06215;Name=PUW34_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06215 CP118122.1 Protein Homology CDS 1293559 1293888 . + 0 ID=cds-WJG98938.1;Parent=gene-PUW34_06215;Dbxref=NCBI_GP:WJG98938.1;Name=WJG98938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460015.1;locus_tag=PUW34_06215;product=phage tail assembly protein T;protein_id=WJG98938.1;transl_table=11 CP118122.1 Genbank pseudogene 1293968 1296954 . + . ID=gene-PUW34_06220;Name=PUW34_06220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06220;pseudo=true CP118122.1 Protein Homology CDS 1293968 1296954 . + 0 ID=cds-PUW34_06220;Parent=gene-PUW34_06220;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460016.1;locus_tag=PUW34_06220;product=phage tail tape measure protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1296951 1297283 . + . ID=gene-PUW34_06225;Name=PUW34_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06225 CP118122.1 Protein Homology CDS 1296951 1297283 . + 0 ID=cds-WJG98047.1;Parent=gene-PUW34_06225;Dbxref=NCBI_GP:WJG98047.1;Name=WJG98047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460017.1;locus_tag=PUW34_06225;product=phage tail protein;protein_id=WJG98047.1;transl_table=11 CP118122.1 Genbank gene 1297382 1297879 . + . ID=gene-PUW34_06230;Name=PUW34_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06230 CP118122.1 Protein Homology CDS 1297382 1297879 . + 0 ID=cds-WJG98048.1;Parent=gene-PUW34_06230;Dbxref=NCBI_GP:WJG98048.1;Name=WJG98048.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410972.1;locus_tag=PUW34_06230;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WJG98048.1;transl_table=11 CP118122.1 Genbank gene 1297996 1298529 . - . ID=gene-PUW34_06235;Name=sodC1;gbkey=Gene;gene=sodC1;gene_biotype=protein_coding;gene_synonym=sodCI;locus_tag=PUW34_06235 CP118122.1 Protein Homology CDS 1297996 1298529 . - 0 ID=cds-WJG98049.1;Parent=gene-PUW34_06235;Dbxref=NCBI_GP:WJG98049.1;Name=WJG98049.1;gbkey=CDS;gene=sodC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460019.1;locus_tag=PUW34_06235;product=superoxide dismutase [Cu-Zn] SodC1;protein_id=WJG98049.1;transl_table=11 CP118122.1 Genbank gene 1298619 1299314 . + . ID=gene-PUW34_06240;Name=PUW34_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06240 CP118122.1 Protein Homology CDS 1298619 1299314 . + 0 ID=cds-WJG98050.1;Parent=gene-PUW34_06240;Dbxref=NCBI_GP:WJG98050.1;Name=WJG98050.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460020.1;locus_tag=PUW34_06240;product=phage minor tail protein L;protein_id=WJG98050.1;transl_table=11 CP118122.1 Genbank gene 1299324 1300055 . + . ID=gene-PUW34_06245;Name=PUW34_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06245 CP118122.1 Protein Homology CDS 1299324 1300055 . + 0 ID=cds-WJG98051.1;Parent=gene-PUW34_06245;Dbxref=NCBI_GP:WJG98051.1;Name=WJG98051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606352.1;locus_tag=PUW34_06245;product=C40 family peptidase;protein_id=WJG98051.1;transl_table=11 CP118122.1 Genbank gene 1299959 1300663 . + . ID=gene-PUW34_06250;Name=PUW34_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06250 CP118122.1 Protein Homology CDS 1299959 1300663 . + 0 ID=cds-WJG98052.1;Parent=gene-PUW34_06250;Dbxref=NCBI_GP:WJG98052.1;Name=WJG98052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460022.1;locus_tag=PUW34_06250;product=tail assembly protein;protein_id=WJG98052.1;transl_table=11 CP118122.1 Genbank pseudogene 1300735 1303186 . + . ID=gene-PUW34_06255;Name=PUW34_06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06255;pseudo=true CP118122.1 Protein Homology CDS 1300735 1303186 . + 0 ID=cds-PUW34_06255;Parent=gene-PUW34_06255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=PUW34_06255;product=host specificity protein J;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1303256 1303438 . + . ID=gene-PUW34_06260;Name=PUW34_06260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06260;pseudo=true CP118122.1 Protein Homology CDS 1303256 1303438 . + 0 ID=cds-PUW34_06260;Parent=gene-PUW34_06260;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020885.2;locus_tag=PUW34_06260;product=DUF1983 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1303496 1304089 . + . ID=gene-PUW34_06265;Name=PUW34_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06265 CP118122.1 Protein Homology CDS 1303496 1304089 . + 0 ID=cds-WJG98939.1;Parent=gene-PUW34_06265;Dbxref=NCBI_GP:WJG98939.1;Name=WJG98939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023837.2;locus_tag=PUW34_06265;product=hypothetical protein;protein_id=WJG98939.1;transl_table=11 CP118122.1 Genbank gene 1304134 1304370 . + . ID=gene-PUW34_06270;Name=PUW34_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06270 CP118122.1 Protein Homology CDS 1304134 1304370 . + 0 ID=cds-WJG98053.1;Parent=gene-PUW34_06270;Dbxref=NCBI_GP:WJG98053.1;Name=WJG98053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533254.1;locus_tag=PUW34_06270;product=hypothetical protein;protein_id=WJG98053.1;transl_table=11 CP118122.1 Genbank pseudogene 1304424 1306391 . + . ID=gene-PUW34_06275;Name=PUW34_06275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06275;pseudo=true CP118122.1 Protein Homology CDS 1304424 1306391 . + 0 ID=cds-PUW34_06275;Parent=gene-PUW34_06275;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=PUW34_06275;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1306391 1306960 . + . ID=gene-PUW34_06280;Name=PUW34_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06280 CP118122.1 Protein Homology CDS 1306391 1306960 . + 0 ID=cds-WJG98054.1;Parent=gene-PUW34_06280;Dbxref=NCBI_GP:WJG98054.1;Name=WJG98054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143180.1;locus_tag=PUW34_06280;product=tail fiber assembly protein;protein_id=WJG98054.1;transl_table=11 CP118122.1 Genbank gene 1307162 1307884 . - . ID=gene-PUW34_06285;Name=sopE;gbkey=Gene;gene=sopE;gene_biotype=protein_coding;locus_tag=PUW34_06285 CP118122.1 Protein Homology CDS 1307162 1307884 . - 0 ID=cds-WJG98055.1;Parent=gene-PUW34_06285;Dbxref=NCBI_GP:WJG98055.1;Name=WJG98055.1;gbkey=CDS;gene=sopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161707.1;locus_tag=PUW34_06285;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE;protein_id=WJG98055.1;transl_table=11 CP118122.1 Genbank pseudogene 1308094 1308335 . + . ID=gene-PUW34_06290;Name=PUW34_06290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06290;pseudo=true CP118122.1 Protein Homology CDS 1308094 1308335 . + 0 ID=cds-PUW34_06290;Parent=gene-PUW34_06290;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239587.1;locus_tag=PUW34_06290;product=recombinase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1308364 1309164 . - . ID=gene-PUW34_06295;Name=PUW34_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06295 CP118122.1 Protein Homology CDS 1308364 1309164 . - 0 ID=cds-WJG98056.1;Parent=gene-PUW34_06295;Dbxref=NCBI_GP:WJG98056.1;Name=WJG98056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586172.1;locus_tag=PUW34_06295;product=hypothetical protein;protein_id=WJG98056.1;transl_table=11 CP118122.1 Genbank pseudogene 1310109 1311031 . - . ID=gene-PUW34_06300;Name=PUW34_06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06300;pseudo=true CP118122.1 Protein Homology CDS 1310109 1311031 . - 0 ID=cds-PUW34_06300;Parent=gene-PUW34_06300;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=PUW34_06300;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1311295 1311756 . - . ID=gene-PUW34_06305;Name=PUW34_06305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06305;pseudo=true CP118122.1 Protein Homology CDS 1311295 1311756 . - 0 ID=cds-PUW34_06305;Parent=gene-PUW34_06305;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023715.1;locus_tag=PUW34_06305;product=DNA breaking-rejoining protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1311745 1311936 . + . ID=gene-PUW34_06310;Name=PUW34_06310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06310;pseudo=true CP118122.1 Protein Homology CDS 1311745 1311936 . + 0 ID=cds-PUW34_06310;Parent=gene-PUW34_06310;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=PUW34_06310;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1311990 1312521 . + . ID=gene-PUW34_06315;Name=PUW34_06315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06315;pseudo=true CP118122.1 Protein Homology CDS 1311990 1312521 . + 0 ID=cds-PUW34_06315;Parent=gene-PUW34_06315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=PUW34_06315;product=DUF2514 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1312778 1312945 . - . ID=gene-PUW34_06320;Name=PUW34_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06320 CP118122.1 Protein Homology CDS 1312778 1312945 . - 0 ID=cds-WJG98057.1;Parent=gene-PUW34_06320;Dbxref=NCBI_GP:WJG98057.1;Name=WJG98057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=PUW34_06320;product=lytic enzyme;protein_id=WJG98057.1;transl_table=11 CP118122.1 Genbank gene 1313009 1313197 . - . ID=gene-PUW34_06325;Name=PUW34_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06325 CP118122.1 Protein Homology CDS 1313009 1313197 . - 0 ID=cds-WJG98058.1;Parent=gene-PUW34_06325;Dbxref=NCBI_GP:WJG98058.1;Name=WJG98058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=PUW34_06325;product=hypothetical protein;protein_id=WJG98058.1;transl_table=11 CP118122.1 Genbank gene 1313252 1313743 . + . ID=gene-PUW34_06330;Name=PUW34_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06330 CP118122.1 Protein Homology CDS 1313252 1313743 . + 0 ID=cds-WJG98059.1;Parent=gene-PUW34_06330;Dbxref=NCBI_GP:WJG98059.1;Name=WJG98059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=PUW34_06330;product=DUF1441 family protein;protein_id=WJG98059.1;transl_table=11 CP118122.1 Genbank pseudogene 1313730 1314297 . + . ID=gene-PUW34_06335;Name=PUW34_06335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06335;pseudo=true CP118122.1 Protein Homology CDS 1313730 1314297 . + 0 ID=cds-PUW34_06335;Parent=gene-PUW34_06335;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=PUW34_06335;product=phage terminase large subunit family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1314296 1315526 . + . ID=gene-PUW34_06340;Name=PUW34_06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06340;pseudo=true CP118122.1 Protein Homology CDS 1314296 1315526 . + 0 ID=cds-PUW34_06340;Parent=gene-PUW34_06340;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=PUW34_06340;product=tail fiber protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1315536 1315823 . + . ID=gene-PUW34_06345;Name=PUW34_06345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06345;pseudo=true CP118122.1 Protein Homology CDS 1315536 1315823 . + 0 ID=cds-PUW34_06345;Parent=gene-PUW34_06345;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013798.2;locus_tag=PUW34_06345;product=macro domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1315836 1316347 . + . ID=gene-PUW34_06350;Name=PUW34_06350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06350;pseudo=true CP118122.1 Protein Homology CDS 1315836 1316347 . + 0 ID=cds-PUW34_06350;Parent=gene-PUW34_06350;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=PUW34_06350;product=tail fiber assembly protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1316444 1316644 . - . ID=gene-PUW34_06355;Name=PUW34_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06355 CP118122.1 Protein Homology CDS 1316444 1316644 . - 0 ID=cds-WJG98060.1;Parent=gene-PUW34_06355;Dbxref=NCBI_GP:WJG98060.1;Name=WJG98060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=PUW34_06355;product=PagK family vesicle-borne virulence factor;protein_id=WJG98060.1;transl_table=11 CP118122.1 Genbank pseudogene 1317034 1317214 . - . ID=gene-PUW34_06360;Name=PUW34_06360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06360;pseudo=true CP118122.1 Protein Homology CDS 1317034 1317214 . - 0 ID=cds-PUW34_06360;Parent=gene-PUW34_06360;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=PUW34_06360;product=IS3 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1317214 1317339 . + . ID=gene-PUW34_06365;Name=PUW34_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06365 CP118122.1 Protein Homology CDS 1317214 1317339 . + 0 ID=cds-WJG98061.1;Parent=gene-PUW34_06365;Dbxref=NCBI_GP:WJG98061.1;Name=WJG98061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=PUW34_06365;product=arsenic transporter;protein_id=WJG98061.1;transl_table=11 CP118122.1 Genbank gene 1317853 1317999 . - . ID=gene-PUW34_06370;Name=PUW34_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06370 CP118122.1 Protein Homology CDS 1317853 1317999 . - 0 ID=cds-WJG98062.1;Parent=gene-PUW34_06370;Dbxref=NCBI_GP:WJG98062.1;Name=WJG98062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537204.1;locus_tag=PUW34_06370;product=hypothetical protein;protein_id=WJG98062.1;transl_table=11 CP118122.1 Genbank gene 1317993 1318160 . + . ID=gene-PUW34_06375;Name=PUW34_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06375 CP118122.1 Protein Homology CDS 1317993 1318160 . + 0 ID=cds-WJG98063.1;Parent=gene-PUW34_06375;Dbxref=NCBI_GP:WJG98063.1;Name=WJG98063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014814.2;locus_tag=PUW34_06375;product=helix-turn-helix domain-containing protein;protein_id=WJG98063.1;transl_table=11 CP118122.1 Genbank gene 1318487 1319101 . - . ID=gene-PUW34_06380;Name=PUW34_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06380 CP118122.1 Protein Homology CDS 1318487 1319101 . - 0 ID=cds-WJG98064.1;Parent=gene-PUW34_06380;Dbxref=NCBI_GP:WJG98064.1;Name=WJG98064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=PUW34_06380;product=disulfide bond formation protein B;protein_id=WJG98064.1;transl_table=11 CP118122.1 Genbank gene 1319111 1319269 . - . ID=gene-PUW34_06385;Name=PUW34_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06385 CP118122.1 Protein Homology CDS 1319111 1319269 . - 0 ID=cds-WJG98065.1;Parent=gene-PUW34_06385;Dbxref=NCBI_GP:WJG98065.1;Name=WJG98065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=PUW34_06385;product=DUF5993 family protein;protein_id=WJG98065.1;transl_table=11 CP118122.1 Genbank gene 1319402 1320316 . - . ID=gene-PUW34_06390;Name=PUW34_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06390 CP118122.1 Protein Homology CDS 1319402 1320316 . - 0 ID=cds-WJG98066.1;Parent=gene-PUW34_06390;Dbxref=NCBI_GP:WJG98066.1;Name=WJG98066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=PUW34_06390;product=DMT family transporter;protein_id=WJG98066.1;transl_table=11 CP118122.1 Genbank pseudogene 1321567 1322033 . - . ID=gene-PUW34_06395;Name=PUW34_06395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06395;pseudo=true CP118122.1 Protein Homology CDS 1321567 1322033 . - 0 ID=cds-PUW34_06395;Parent=gene-PUW34_06395;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=PUW34_06395;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1322103 1323310 . + . ID=gene-PUW34_06400;Name=PUW34_06400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06400;pseudo=true CP118122.1 Protein Homology CDS 1322103 1323310 . + 0 ID=cds-PUW34_06400;Parent=gene-PUW34_06400;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=PUW34_06400;product=IS256 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1323456 1323596 . - . ID=gene-PUW34_06405;Name=PUW34_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06405 CP118122.1 Protein Homology CDS 1323456 1323596 . - 0 ID=cds-WJG98067.1;Parent=gene-PUW34_06405;Dbxref=NCBI_GP:WJG98067.1;Name=WJG98067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=PUW34_06405;product=hypothetical protein;protein_id=WJG98067.1;transl_table=11 CP118122.1 Genbank gene 1323762 1324031 . - . ID=gene-PUW34_06410;Name=PUW34_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06410 CP118122.1 Protein Homology CDS 1323762 1324031 . - 0 ID=cds-WJG98068.1;Parent=gene-PUW34_06410;Dbxref=NCBI_GP:WJG98068.1;Name=WJG98068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=PUW34_06410;product=hypothetical protein;protein_id=WJG98068.1;transl_table=11 CP118122.1 Genbank gene 1324404 1324823 . + . ID=gene-PUW34_06415;Name=PUW34_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06415 CP118122.1 Protein Homology CDS 1324404 1324823 . + 0 ID=cds-WJG98069.1;Parent=gene-PUW34_06415;Dbxref=NCBI_GP:WJG98069.1;Name=WJG98069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=PUW34_06415;product=GNAT family N-acetyltransferase;protein_id=WJG98069.1;transl_table=11 CP118122.1 Genbank gene 1325196 1325672 . - . ID=gene-PUW34_06420;Name=PUW34_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06420 CP118122.1 Protein Homology CDS 1325196 1325672 . - 0 ID=cds-WJG98070.1;Parent=gene-PUW34_06420;Dbxref=NCBI_GP:WJG98070.1;Name=WJG98070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=PUW34_06420;product=hypothetical protein;protein_id=WJG98070.1;transl_table=11 CP118122.1 Genbank gene 1326002 1326397 . - . ID=gene-PUW34_06425;Name=PUW34_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06425 CP118122.1 Protein Homology CDS 1326002 1326397 . - 0 ID=cds-WJG98071.1;Parent=gene-PUW34_06425;Dbxref=NCBI_GP:WJG98071.1;Name=WJG98071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=PUW34_06425;product=DUF1398 domain-containing protein;protein_id=WJG98071.1;transl_table=11 CP118122.1 Genbank gene 1327081 1327803 . + . ID=gene-PUW34_06430;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=PUW34_06430 CP118122.1 Protein Homology CDS 1327081 1327803 . + 0 ID=cds-WJG98072.1;Parent=gene-PUW34_06430;Dbxref=NCBI_GP:WJG98072.1;Name=WJG98072.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=PUW34_06430;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WJG98072.1;transl_table=11 CP118122.1 Genbank gene 1328088 1328252 . + . ID=gene-PUW34_06435;Name=PUW34_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06435 CP118122.1 Protein Homology CDS 1328088 1328252 . + 0 ID=cds-WJG98073.1;Parent=gene-PUW34_06435;Dbxref=NCBI_GP:WJG98073.1;Name=WJG98073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=PUW34_06435;product=hypothetical protein;protein_id=WJG98073.1;transl_table=11 CP118122.1 Genbank gene 1328476 1329126 . + . ID=gene-PUW34_06440;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=PUW34_06440 CP118122.1 Protein Homology CDS 1328476 1329126 . + 0 ID=cds-WJG98074.1;Parent=gene-PUW34_06440;Dbxref=NCBI_GP:WJG98074.1;Name=WJG98074.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=PUW34_06440;product=protein-serine/threonine phosphatase;protein_id=WJG98074.1;transl_table=11 CP118122.1 Genbank gene 1329145 1329336 . - . ID=gene-PUW34_06445;Name=PUW34_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06445 CP118122.1 Protein Homology CDS 1329145 1329336 . - 0 ID=cds-WJG98075.1;Parent=gene-PUW34_06445;Dbxref=NCBI_GP:WJG98075.1;Name=WJG98075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=PUW34_06445;product=YebW family protein;protein_id=WJG98075.1;transl_table=11 CP118122.1 Genbank gene 1329447 1329683 . - . ID=gene-PUW34_06450;Name=PUW34_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06450 CP118122.1 Protein Homology CDS 1329447 1329683 . - 0 ID=cds-WJG98940.1;Parent=gene-PUW34_06450;Dbxref=NCBI_GP:WJG98940.1;Name=WJG98940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=PUW34_06450;product=YebV family protein;protein_id=WJG98940.1;transl_table=11 CP118122.1 Genbank gene 1329801 1331240 . - . ID=gene-PUW34_06455;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=PUW34_06455 CP118122.1 Protein Homology CDS 1329801 1331240 . - 0 ID=cds-WJG98076.1;Parent=gene-PUW34_06455;Dbxref=NCBI_GP:WJG98076.1;Name=WJG98076.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=PUW34_06455;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WJG98076.1;transl_table=11 CP118122.1 Genbank pseudogene 1331318 1333950 . - . ID=gene-PUW34_06460;Name=PUW34_06460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06460;pseudo=true CP118122.1 Protein Homology CDS 1331318 1333950 . - 0 ID=cds-PUW34_06460;Parent=gene-PUW34_06460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=PUW34_06460;product=MlaD family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1333919 1335202 . - . ID=gene-PUW34_06465;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=PUW34_06465 CP118122.1 Protein Homology CDS 1333919 1335202 . - 0 ID=cds-WJG98077.1;Parent=gene-PUW34_06465;Dbxref=NCBI_GP:WJG98077.1;Name=WJG98077.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=PUW34_06465;product=membrane integrity lipid transport subunit YebS;protein_id=WJG98077.1;transl_table=11 CP118122.1 Genbank gene 1335331 1335828 . + . ID=gene-PUW34_06470;Name=PUW34_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06470 CP118122.1 Protein Homology CDS 1335331 1335828 . + 0 ID=cds-WJG98078.1;Parent=gene-PUW34_06470;Dbxref=NCBI_GP:WJG98078.1;Name=WJG98078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=PUW34_06470;product=GAF domain-containing protein;protein_id=WJG98078.1;transl_table=11 CP118122.1 Genbank gene 1335926 1336612 . + . ID=gene-PUW34_06475;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=PUW34_06475 CP118122.1 Protein Homology CDS 1335926 1336612 . + 0 ID=cds-WJG98079.1;Parent=gene-PUW34_06475;Dbxref=NCBI_GP:WJG98079.1;Name=WJG98079.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=PUW34_06475;product=RNA chaperone ProQ;protein_id=WJG98079.1;transl_table=11 CP118122.1 Genbank pseudogene 1336632 1338679 . + . ID=gene-PUW34_06480;Name=prc;gbkey=Gene;gene=prc;gene_biotype=pseudogene;locus_tag=PUW34_06480;pseudo=true CP118122.1 Protein Homology CDS 1336632 1338679 . + 0 ID=cds-PUW34_06480;Parent=gene-PUW34_06480;Note=frameshifted;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=PUW34_06480;product=carboxy terminal-processing peptidase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1338872 1339753 . + . ID=gene-PUW34_06485;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=PUW34_06485 CP118122.1 Protein Homology CDS 1338872 1339753 . + 0 ID=cds-WJG98080.1;Parent=gene-PUW34_06485;Dbxref=NCBI_GP:WJG98080.1;Name=WJG98080.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=PUW34_06485;product=protease HtpX;protein_id=WJG98080.1;transl_table=11 CP118122.1 Genbank pseudogene 1339801 1341052 . - . ID=gene-PUW34_06490;Name=PUW34_06490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06490;pseudo=true CP118122.1 Protein Homology CDS 1339801 1341052 . - 0 ID=cds-PUW34_06490;Parent=gene-PUW34_06490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=PUW34_06490;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1341228 1342018 . + . ID=gene-PUW34_06495;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=pseudogene;locus_tag=PUW34_06495;pseudo=true CP118122.1 Protein Homology CDS 1341228 1342018 . + 0 ID=cds-PUW34_06495;Parent=gene-PUW34_06495;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=PUW34_06495;product=DNA-binding transcriptional regulator KdgR;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1342230 1342469 . - . ID=gene-PUW34_06500;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=PUW34_06500 CP118122.1 Protein Homology CDS 1342230 1342469 . - 0 ID=cds-WJG98081.1;Parent=gene-PUW34_06500;Dbxref=NCBI_GP:WJG98081.1;Name=WJG98081.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=PUW34_06500;product=invasion protein YobH;protein_id=WJG98081.1;transl_table=11 CP118122.1 Genbank gene 1342627 1342770 . + . ID=gene-PUW34_06505;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=PUW34_06505 CP118122.1 Protein Homology CDS 1342627 1342770 . + 0 ID=cds-WJG98082.1;Parent=gene-PUW34_06505;Dbxref=NCBI_GP:WJG98082.1;Name=WJG98082.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=PUW34_06505;product=PhoP/PhoQ regulator MgrB;protein_id=WJG98082.1;transl_table=11 CP118122.1 Genbank gene 1342841 1343128 . + . ID=gene-PUW34_06510;Name=PUW34_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06510 CP118122.1 Protein Homology CDS 1342841 1343128 . + 0 ID=cds-WJG98083.1;Parent=gene-PUW34_06510;Dbxref=NCBI_GP:WJG98083.1;Name=WJG98083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=PUW34_06510;product=YebO family protein;protein_id=WJG98083.1;transl_table=11 CP118122.1 Genbank gene 1343776 1343919 . + . ID=gene-PUW34_06515;Name=PUW34_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06515 CP118122.1 Protein Homology CDS 1343776 1343919 . + 0 ID=cds-WJG98084.1;Parent=gene-PUW34_06515;Dbxref=NCBI_GP:WJG98084.1;Name=WJG98084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=PUW34_06515;product=DUF2627 domain-containing protein;protein_id=WJG98084.1;transl_table=11 CP118122.1 Genbank gene 1343932 1344141 . + . ID=gene-PUW34_06520;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PUW34_06520 CP118122.1 Protein Homology CDS 1343932 1344141 . + 0 ID=cds-WJG98085.1;Parent=gene-PUW34_06520;Dbxref=NCBI_GP:WJG98085.1;Name=WJG98085.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=PUW34_06520;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WJG98085.1;transl_table=11 CP118122.1 Genbank pseudogene 1344361 1346105 . + . ID=gene-PUW34_06525;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=pseudogene;locus_tag=PUW34_06525;pseudo=true CP118122.1 Protein Homology CDS 1344361 1346105 . + 0 ID=cds-PUW34_06525;Parent=gene-PUW34_06525;Note=frameshifted;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=PUW34_06525;product=peptidoglycan glycosyltransferase FtsI;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1346171 1346979 . + . ID=gene-PUW34_06530;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=pseudogene;locus_tag=PUW34_06530;pseudo=true CP118122.1 Protein Homology CDS 1346171 1346979 . + 0 ID=cds-PUW34_06530;Parent=gene-PUW34_06530;Note=frameshifted;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=PUW34_06530;product=23S rRNA (guanine(745)-N(1))-methyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1346976 1347542 . - . ID=gene-PUW34_06535;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=PUW34_06535 CP118122.1 Protein Homology CDS 1346976 1347542 . - 0 ID=cds-WJG98086.1;Parent=gene-PUW34_06535;Dbxref=NCBI_GP:WJG98086.1;Name=WJG98086.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=PUW34_06535;product=manganese efflux pump MntP;protein_id=WJG98086.1;transl_table=11 CP118122.1 cmsearch riboswitch 1347654 1347755 . - . ID=id-CP118122.1:1347654..1347755;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118122.1 Genbank pseudogene 1347952 1348410 . - . ID=gene-PUW34_06540;Name=PUW34_06540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06540;pseudo=true CP118122.1 Protein Homology CDS 1347952 1348410 . - 0 ID=cds-PUW34_06540;Parent=gene-PUW34_06540;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=PUW34_06540;product=DUF986 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1348469 1349320 . - . ID=gene-PUW34_06545;Name=PUW34_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06545 CP118122.1 Protein Homology CDS 1348469 1349320 . - 0 ID=cds-WJG98087.1;Parent=gene-PUW34_06545;Dbxref=NCBI_GP:WJG98087.1;Name=WJG98087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=PUW34_06545;product=PTS mannose transporter subunit IID;protein_id=WJG98087.1;transl_table=11 CP118122.1 Genbank gene 1349333 1350133 . - . ID=gene-PUW34_06550;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=PUW34_06550 CP118122.1 Protein Homology CDS 1349333 1350133 . - 0 ID=cds-WJG98088.1;Parent=gene-PUW34_06550;Dbxref=NCBI_GP:WJG98088.1;Name=WJG98088.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=PUW34_06550;product=PTS mannose transporter subunit IIC;protein_id=WJG98088.1;transl_table=11 CP118122.1 Genbank gene 1350186 1351154 . - . ID=gene-PUW34_06555;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=PUW34_06555 CP118122.1 Protein Homology CDS 1350186 1351154 . - 0 ID=cds-WJG98089.1;Parent=gene-PUW34_06555;Dbxref=NCBI_GP:WJG98089.1;Name=WJG98089.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=PUW34_06555;product=PTS mannose transporter subunit IIAB;protein_id=WJG98089.1;transl_table=11 CP118122.1 Genbank gene 1351627 1353186 . + . ID=gene-PUW34_06560;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=PUW34_06560 CP118122.1 Protein Homology CDS 1351627 1353186 . + 0 ID=cds-WJG98090.1;Parent=gene-PUW34_06560;Dbxref=NCBI_GP:WJG98090.1;Name=WJG98090.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=PUW34_06560;product=CNNM family cation transport protein YoaE;protein_id=WJG98090.1;transl_table=11 CP118122.1 Genbank gene 1353208 1354809 . - . ID=gene-PUW34_06565;Name=PUW34_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06565 CP118122.1 Protein Homology CDS 1353208 1354809 . - 0 ID=cds-WJG98091.1;Parent=gene-PUW34_06565;Dbxref=NCBI_GP:WJG98091.1;Name=WJG98091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=PUW34_06565;product=cyclic diguanylate phosphodiesterase;protein_id=WJG98091.1;transl_table=11 CP118122.1 Genbank gene 1354947 1356311 . - . ID=gene-PUW34_06570;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=PUW34_06570 CP118122.1 Protein Homology CDS 1354947 1356311 . - 0 ID=cds-WJG98092.1;Parent=gene-PUW34_06570;Dbxref=NCBI_GP:WJG98092.1;Name=WJG98092.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=PUW34_06570;product=L-serine ammonia-lyase;protein_id=WJG98092.1;transl_table=11 CP118122.1 Genbank gene 1356575 1357153 . - . ID=gene-PUW34_06575;Name=PUW34_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06575 CP118122.1 Protein Homology CDS 1356575 1357153 . - 0 ID=cds-WJG98093.1;Parent=gene-PUW34_06575;Dbxref=NCBI_GP:WJG98093.1;Name=WJG98093.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=PUW34_06575;product=CoA pyrophosphatase;protein_id=WJG98093.1;transl_table=11 CP118122.1 Genbank pseudogene 1357157 1358520 . - . ID=gene-PUW34_06580;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=pseudogene;locus_tag=PUW34_06580;pseudo=true CP118122.1 Protein Homology CDS 1357157 1358520 . - 0 ID=cds-PUW34_06580;Parent=gene-PUW34_06580;Note=frameshifted;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=PUW34_06580;product=aminodeoxychorismate synthase component 1;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1358601 1358780 . + . ID=gene-PUW34_06585;Name=PUW34_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06585 CP118122.1 Protein Homology CDS 1358601 1358780 . + 0 ID=cds-WJG98094.1;Parent=gene-PUW34_06585;Dbxref=NCBI_GP:WJG98094.1;Name=WJG98094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=PUW34_06585;product=YoaH family protein;protein_id=WJG98094.1;transl_table=11 CP118122.1 Genbank gene 1358786 1359130 . - . ID=gene-PUW34_06590;Name=PUW34_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06590 CP118122.1 Protein Homology CDS 1358786 1359130 . - 0 ID=cds-WJG98095.1;Parent=gene-PUW34_06590;Dbxref=NCBI_GP:WJG98095.1;Name=WJG98095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=PUW34_06590;product=RidA family protein;protein_id=WJG98095.1;transl_table=11 CP118122.1 Genbank pseudogene 1359261 1361170 . + . ID=gene-PUW34_06595;Name=PUW34_06595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06595;pseudo=true CP118122.1 Protein Homology CDS 1359261 1361170 . + 0 ID=cds-PUW34_06595;Parent=gene-PUW34_06595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=PUW34_06595;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1361228 1361923 . + . ID=gene-PUW34_06600;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=PUW34_06600 CP118122.1 Protein Homology CDS 1361228 1361923 . + 0 ID=cds-WJG98096.1;Parent=gene-PUW34_06600;Dbxref=NCBI_GP:WJG98096.1;Name=WJG98096.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=PUW34_06600;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WJG98096.1;transl_table=11 CP118122.1 Genbank gene 1361995 1362576 . + . ID=gene-PUW34_06605;Name=PUW34_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06605 CP118122.1 Protein Homology CDS 1361995 1362576 . + 0 ID=cds-WJG98097.1;Parent=gene-PUW34_06605;Dbxref=NCBI_GP:WJG98097.1;Name=WJG98097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=PUW34_06605;product=Slp family lipoprotein;protein_id=WJG98097.1;transl_table=11 CP118122.1 Genbank gene 1362781 1364466 . + . ID=gene-PUW34_06610;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=PUW34_06610 CP118122.1 Protein Homology CDS 1362781 1364466 . + 0 ID=cds-WJG98098.1;Parent=gene-PUW34_06610;Dbxref=NCBI_GP:WJG98098.1;Name=WJG98098.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=PUW34_06610;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WJG98098.1;transl_table=11 CP118122.1 Genbank gene 1364539 1365666 . + . ID=gene-PUW34_06615;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=PUW34_06615 CP118122.1 Protein Homology CDS 1364539 1365666 . + 0 ID=cds-WJG98099.1;Parent=gene-PUW34_06615;Dbxref=NCBI_GP:WJG98099.1;Name=WJG98099.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=PUW34_06615;product=ribonuclease D;protein_id=WJG98099.1;transl_table=11 CP118122.1 Genbank gene 1365788 1366054 . - . ID=gene-PUW34_06620;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=PUW34_06620 CP118122.1 Protein Homology CDS 1365788 1366054 . - 0 ID=cds-WJG98100.1;Parent=gene-PUW34_06620;Dbxref=NCBI_GP:WJG98100.1;Name=WJG98100.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=PUW34_06620;product=cell division topological specificity factor MinE;protein_id=WJG98100.1;transl_table=11 CP118122.1 Genbank gene 1366058 1366870 . - . ID=gene-PUW34_06625;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=PUW34_06625 CP118122.1 Protein Homology CDS 1366058 1366870 . - 0 ID=cds-WJG98101.1;Parent=gene-PUW34_06625;Dbxref=NCBI_GP:WJG98101.1;Name=WJG98101.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=PUW34_06625;product=septum site-determining protein MinD;protein_id=WJG98101.1;transl_table=11 CP118122.1 Genbank gene 1366894 1367601 . - . ID=gene-PUW34_06630;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=PUW34_06630 CP118122.1 Protein Homology CDS 1366894 1367601 . - 0 ID=cds-WJG98102.1;Parent=gene-PUW34_06630;Dbxref=NCBI_GP:WJG98102.1;Name=WJG98102.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=PUW34_06630;product=septum site-determining protein MinC;protein_id=WJG98102.1;transl_table=11 CP118122.1 Genbank gene 1367727 1368020 . + . ID=gene-PUW34_06635;Name=PUW34_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06635 CP118122.1 Protein Homology CDS 1367727 1368020 . + 0 ID=cds-WJG98103.1;Parent=gene-PUW34_06635;Dbxref=NCBI_GP:WJG98103.1;Name=WJG98103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667868.1;locus_tag=PUW34_06635;product=YcgL domain-containing protein;protein_id=WJG98103.1;transl_table=11 CP118122.1 Genbank pseudogene 1368070 1368728 . + . ID=gene-PUW34_06640;Name=PUW34_06640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06640;pseudo=true CP118122.1 Protein Homology CDS 1368070 1368728 . + 0 ID=cds-PUW34_06640;Parent=gene-PUW34_06640;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=PUW34_06640;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1368821 1369267 . + . ID=gene-PUW34_06645;Name=PUW34_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06645 CP118122.1 Protein Homology CDS 1368821 1369267 . + 0 ID=cds-WJG98104.1;Parent=gene-PUW34_06645;Dbxref=NCBI_GP:WJG98104.1;Name=WJG98104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=PUW34_06645;product=YcgN family cysteine cluster protein;protein_id=WJG98104.1;transl_table=11 CP118122.1 Genbank gene 1369619 1369756 . + . ID=gene-PUW34_06650;Name=PUW34_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06650 CP118122.1 Protein Homology CDS 1369619 1369756 . + 0 ID=cds-WJG98105.1;Parent=gene-PUW34_06650;Dbxref=NCBI_GP:WJG98105.1;Name=WJG98105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=PUW34_06650;product=hypothetical protein;protein_id=WJG98105.1;transl_table=11 CP118122.1 Genbank gene 1369948 1370121 . + . ID=gene-PUW34_06655;Name=PUW34_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06655 CP118122.1 Protein Homology CDS 1369948 1370121 . + 0 ID=cds-WJG98106.1;Parent=gene-PUW34_06655;Dbxref=NCBI_GP:WJG98106.1;Name=WJG98106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=PUW34_06655;product=addiction module toxin%2C GnsA/GnsB family;protein_id=WJG98106.1;transl_table=11 CP118122.1 Genbank gene 1370193 1370534 . - . ID=gene-PUW34_06660;Name=PUW34_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06660 CP118122.1 Protein Homology CDS 1370193 1370534 . - 0 ID=cds-WJG98107.1;Parent=gene-PUW34_06660;Dbxref=NCBI_GP:WJG98107.1;Name=WJG98107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=PUW34_06660;product=DUF1971 domain-containing protein;protein_id=WJG98107.1;transl_table=11 CP118122.1 Genbank gene 1370643 1371173 . - . ID=gene-PUW34_06665;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=PUW34_06665 CP118122.1 Protein Homology CDS 1370643 1371173 . - 0 ID=cds-WJG98108.1;Parent=gene-PUW34_06665;Dbxref=NCBI_GP:WJG98108.1;Name=WJG98108.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=PUW34_06665;product=disulfide bond formation protein DsbB;protein_id=WJG98108.1;transl_table=11 CP118122.1 Genbank gene 1371315 1372859 . - . ID=gene-PUW34_06670;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=PUW34_06670 CP118122.1 Protein Homology CDS 1371315 1372859 . - 0 ID=cds-WJG98109.1;Parent=gene-PUW34_06670;Dbxref=NCBI_GP:WJG98109.1;Name=WJG98109.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaB;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=PUW34_06670;product=Na(+)/H(+) antiporter NhaB;protein_id=WJG98109.1;transl_table=11 CP118122.1 Genbank gene 1373079 1373798 . + . ID=gene-PUW34_06675;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=PUW34_06675 CP118122.1 Protein Homology CDS 1373079 1373798 . + 0 ID=cds-WJG98110.1;Parent=gene-PUW34_06675;Dbxref=NCBI_GP:WJG98110.1;Name=WJG98110.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=PUW34_06675;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WJG98110.1;transl_table=11 CP118122.1 Genbank gene 1373845 1375377 . - . ID=gene-PUW34_06680;Name=PUW34_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06680 CP118122.1 Protein Homology CDS 1373845 1375377 . - 0 ID=cds-WJG98111.1;Parent=gene-PUW34_06680;Dbxref=NCBI_GP:WJG98111.1;Name=WJG98111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=PUW34_06680;product=SpoVR family protein;protein_id=WJG98111.1;transl_table=11 CP118122.1 Genbank pseudogene 1375700 1376996 . + . ID=gene-PUW34_06685;Name=PUW34_06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06685;pseudo=true CP118122.1 Protein Homology CDS 1375700 1376996 . + 0 ID=cds-PUW34_06685;Parent=gene-PUW34_06685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=PUW34_06685;product=D-amino acid dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1377010 1378080 . + . ID=gene-PUW34_06690;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=PUW34_06690 CP118122.1 Protein Homology CDS 1377010 1378080 . + 0 ID=cds-WJG98112.1;Parent=gene-PUW34_06690;Dbxref=NCBI_GP:WJG98112.1;Name=WJG98112.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=PUW34_06690;product=catabolic alanine racemase DadX;protein_id=WJG98112.1;transl_table=11 CP118122.1 Genbank gene 1378143 1379876 . - . ID=gene-PUW34_06695;Name=PUW34_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06695 CP118122.1 Protein Homology CDS 1378143 1379876 . - 0 ID=cds-WJG98113.1;Parent=gene-PUW34_06695;Dbxref=NCBI_GP:WJG98113.1;Name=WJG98113.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=PUW34_06695;product=potassium/proton antiporter;protein_id=WJG98113.1;transl_table=11 CP118122.1 Genbank gene 1379973 1380887 . - . ID=gene-PUW34_06700;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=PUW34_06700 CP118122.1 Protein Homology CDS 1379973 1380887 . - 0 ID=cds-WJG98114.1;Parent=gene-PUW34_06700;Dbxref=NCBI_GP:WJG98114.1;Name=WJG98114.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=PUW34_06700;product=muramoyltetrapeptide carboxypeptidase;protein_id=WJG98114.1;transl_table=11 CP118122.1 Genbank gene 1381058 1381669 . + . ID=gene-PUW34_06705;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=PUW34_06705 CP118122.1 Protein Homology CDS 1381058 1381669 . + 0 ID=cds-WJG98115.1;Parent=gene-PUW34_06705;Dbxref=NCBI_GP:WJG98115.1;Name=WJG98115.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=PUW34_06705;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WJG98115.1;transl_table=11 CP118122.1 Genbank gene 1381683 1382417 . - . ID=gene-PUW34_06710;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=PUW34_06710 CP118122.1 Protein Homology CDS 1381683 1382417 . - 0 ID=cds-WJG98116.1;Parent=gene-PUW34_06710;Dbxref=NCBI_GP:WJG98116.1;Name=WJG98116.1;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=PUW34_06710;product=flagellar brake protein YcgR;protein_id=WJG98116.1;transl_table=11 CP118122.1 Genbank gene 1382586 1382840 . + . ID=gene-PUW34_06715;Name=PUW34_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06715 CP118122.1 Protein Homology CDS 1382586 1382840 . + 0 ID=cds-WJG98117.1;Parent=gene-PUW34_06715;Dbxref=NCBI_GP:WJG98117.1;Name=WJG98117.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=PUW34_06715;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WJG98117.1;transl_table=11 CP118122.1 Genbank gene 1382903 1384615 . - . ID=gene-PUW34_06720;Name=PUW34_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06720 CP118122.1 Protein Homology CDS 1382903 1384615 . - 0 ID=cds-WJG98941.1;Parent=gene-PUW34_06720;Dbxref=NCBI_GP:WJG98941.1;Name=WJG98941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=PUW34_06720;product=alpha%2Calpha-trehalase;protein_id=WJG98941.1;transl_table=11 CP118122.1 Genbank gene 1384829 1386103 . - . ID=gene-PUW34_06725;Name=PUW34_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06725 CP118122.1 Protein Homology CDS 1384829 1386103 . - 0 ID=cds-WJG98118.1;Parent=gene-PUW34_06725;Dbxref=NCBI_GP:WJG98118.1;Name=WJG98118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=PUW34_06725;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WJG98118.1;transl_table=11 CP118122.1 Genbank gene 1386498 1386587 . - . ID=gene-PUW34_06730;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=PUW34_06730 CP118122.1 Protein Homology CDS 1386498 1386587 . - 0 ID=cds-WJG98119.1;Parent=gene-PUW34_06730;Dbxref=NCBI_GP:WJG98119.1;Name=WJG98119.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=PUW34_06730;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WJG98119.1;transl_table=11 CP118122.1 Genbank pseudogene 1386600 1387735 . - . ID=gene-PUW34_06735;Name=appB;gbkey=Gene;gene=appB;gene_biotype=pseudogene;locus_tag=PUW34_06735;pseudo=true CP118122.1 Protein Homology CDS 1386600 1387735 . - 0 ID=cds-PUW34_06735;Parent=gene-PUW34_06735;Note=frameshifted;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=PUW34_06735;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1387747 1389291 . - . ID=gene-PUW34_06740;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=PUW34_06740 CP118122.1 Protein Homology CDS 1387747 1389291 . - 0 ID=cds-WJG98120.1;Parent=gene-PUW34_06740;Dbxref=NCBI_GP:WJG98120.1;Name=WJG98120.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=PUW34_06740;product=cytochrome bd-II oxidase subunit 1;protein_id=WJG98120.1;transl_table=11 CP118122.1 Genbank pseudogene 1389366 1390214 . - . ID=gene-PUW34_06745;Name=PUW34_06745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06745;pseudo=true CP118122.1 Protein Homology CDS 1389366 1390214 . - 0 ID=cds-PUW34_06745;Parent=gene-PUW34_06745;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=PUW34_06745;product=hydrogenase expression/formation protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1390211 1390615 . - . ID=gene-PUW34_06750;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=PUW34_06750 CP118122.1 Protein Homology CDS 1390211 1390615 . - 0 ID=cds-WJG98121.1;Parent=gene-PUW34_06750;Dbxref=NCBI_GP:WJG98121.1;Name=WJG98121.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=PUW34_06750;product=hydrogenase-1 operon protein HyaE;protein_id=WJG98121.1;transl_table=11 CP118122.1 Genbank gene 1390605 1391201 . - . ID=gene-PUW34_06755;Name=PUW34_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06755 CP118122.1 Protein Homology CDS 1390605 1391201 . - 0 ID=cds-WJG98122.1;Parent=gene-PUW34_06755;Dbxref=NCBI_GP:WJG98122.1;Name=WJG98122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=PUW34_06755;product=hydrogenase 1 maturation protease;protein_id=WJG98122.1;transl_table=11 CP118122.1 Genbank pseudogene 1391198 1391928 . - . ID=gene-PUW34_06760;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=pseudogene;locus_tag=PUW34_06760;pseudo=true CP118122.1 Protein Homology CDS 1391198 1391928 . - 0 ID=cds-PUW34_06760;Parent=gene-PUW34_06760;Note=frameshifted;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=PUW34_06760;product=Ni/Fe-hydrogenase b-type cytochrome subunit;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1391947 1393740 . - . ID=gene-PUW34_06765;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=PUW34_06765 CP118122.1 Protein Homology CDS 1391947 1393740 . - 0 ID=cds-WJG98123.1;Parent=gene-PUW34_06765;Dbxref=NCBI_GP:WJG98123.1;Name=WJG98123.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=PUW34_06765;product=Ni/Fe-hydrogenase large subunit;protein_id=WJG98123.1;transl_table=11 CP118122.1 Genbank gene 1393737 1394855 . - . ID=gene-PUW34_06770;Name=PUW34_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06770 CP118122.1 Protein Homology CDS 1393737 1394855 . - 0 ID=cds-WJG98124.1;Parent=gene-PUW34_06770;Dbxref=NCBI_GP:WJG98124.1;Name=WJG98124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=PUW34_06770;product=hydrogenase 1 small subunit;protein_id=WJG98124.1;transl_table=11 CP118122.1 Genbank gene 1395770 1396222 . - . ID=gene-PUW34_06775;Name=PUW34_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06775 CP118122.1 Protein Homology CDS 1395770 1396222 . - 0 ID=cds-WJG98125.1;Parent=gene-PUW34_06775;Dbxref=NCBI_GP:WJG98125.1;Name=WJG98125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=PUW34_06775;product=hypothetical protein;protein_id=WJG98125.1;transl_table=11 CP118122.1 Genbank gene 1396261 1396881 . - . ID=gene-PUW34_06780;Name=PUW34_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06780 CP118122.1 Protein Homology CDS 1396261 1396881 . - 0 ID=cds-WJG98126.1;Parent=gene-PUW34_06780;Dbxref=NCBI_GP:WJG98126.1;Name=WJG98126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=PUW34_06780;product=hypothetical protein;protein_id=WJG98126.1;transl_table=11 CP118122.1 Genbank gene 1397640 1398731 . - . ID=gene-PUW34_06785;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=PUW34_06785 CP118122.1 Protein Homology CDS 1397640 1398731 . - 0 ID=cds-WJG98127.1;Parent=gene-PUW34_06785;Dbxref=NCBI_GP:WJG98127.1;Name=WJG98127.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=PUW34_06785;product=redox-regulated ATPase YchF;protein_id=WJG98127.1;transl_table=11 CP118122.1 Genbank gene 1398848 1399432 . - . ID=gene-PUW34_06790;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=PUW34_06790 CP118122.1 Protein Homology CDS 1398848 1399432 . - 0 ID=cds-WJG98128.1;Parent=gene-PUW34_06790;Dbxref=NCBI_GP:WJG98128.1;Name=WJG98128.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=PUW34_06790;product=aminoacyl-tRNA hydrolase;protein_id=WJG98128.1;transl_table=11 CP118122.1 Genbank gene 1399708 1399986 . + . ID=gene-PUW34_06795;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=PUW34_06795 CP118122.1 Protein Homology CDS 1399708 1399986 . + 0 ID=cds-WJG98129.1;Parent=gene-PUW34_06795;Dbxref=NCBI_GP:WJG98129.1;Name=WJG98129.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=PUW34_06795;product=stress-induced protein YchH;protein_id=WJG98129.1;transl_table=11 CP118122.1 Genbank gene 1400031 1401716 . - . ID=gene-PUW34_06800;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=PUW34_06800 CP118122.1 Protein Homology CDS 1400031 1401716 . - 0 ID=cds-WJG98130.1;Parent=gene-PUW34_06800;Dbxref=NCBI_GP:WJG98130.1;Name=WJG98130.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=PUW34_06800;product=C4-dicarboxylic acid transporter DauA;protein_id=WJG98130.1;transl_table=11 CP118122.1 Genbank gene 1401841 1402788 . - . ID=gene-PUW34_06805;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=PUW34_06805 CP118122.1 Protein Homology CDS 1401841 1402788 . - 0 ID=cds-WJG98131.1;Parent=gene-PUW34_06805;Dbxref=NCBI_GP:WJG98131.1;Name=WJG98131.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=PUW34_06805;product=ribose-phosphate diphosphokinase;protein_id=WJG98131.1;transl_table=11 CP118122.1 Genbank gene 1403054 1403905 . - . ID=gene-PUW34_06810;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=PUW34_06810 CP118122.1 Protein Homology CDS 1403054 1403905 . - 0 ID=cds-WJG98132.1;Parent=gene-PUW34_06810;Dbxref=NCBI_GP:WJG98132.1;Name=WJG98132.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=PUW34_06810;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WJG98132.1;transl_table=11 CP118122.1 Genbank gene 1403902 1404525 . - . ID=gene-PUW34_06815;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=PUW34_06815 CP118122.1 Protein Homology CDS 1403902 1404525 . - 0 ID=cds-WJG98133.1;Parent=gene-PUW34_06815;Dbxref=NCBI_GP:WJG98133.1;Name=WJG98133.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=PUW34_06815;product=lipoprotein insertase outer membrane protein LolB;protein_id=WJG98133.1;transl_table=11 CP118122.1 Genbank gene 1404839 1406095 . + . ID=gene-PUW34_06820;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=PUW34_06820 CP118122.1 Protein Homology CDS 1404839 1406095 . + 0 ID=cds-WJG98134.1;Parent=gene-PUW34_06820;Dbxref=NCBI_GP:WJG98134.1;Name=WJG98134.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=PUW34_06820;product=glutamyl-tRNA reductase;protein_id=WJG98134.1;transl_table=11 CP118122.1 Genbank gene 1406136 1407218 . + . ID=gene-PUW34_06825;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=PUW34_06825 CP118122.1 Protein Homology CDS 1406136 1407218 . + 0 ID=cds-WJG98135.1;Parent=gene-PUW34_06825;Dbxref=NCBI_GP:WJG98135.1;Name=WJG98135.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=PUW34_06825;product=peptide chain release factor 1;protein_id=WJG98135.1;transl_table=11 CP118122.1 Genbank gene 1407218 1408051 . + . ID=gene-PUW34_06830;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=PUW34_06830 CP118122.1 Protein Homology CDS 1407218 1408051 . + 0 ID=cds-WJG98136.1;Parent=gene-PUW34_06830;Dbxref=NCBI_GP:WJG98136.1;Name=WJG98136.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=PUW34_06830;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WJG98136.1;transl_table=11 CP118122.1 Genbank gene 1408048 1408437 . + . ID=gene-PUW34_06835;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=PUW34_06835 CP118122.1 Protein Homology CDS 1408048 1408437 . + 0 ID=cds-WJG98137.1;Parent=gene-PUW34_06835;Dbxref=NCBI_GP:WJG98137.1;Name=WJG98137.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=PUW34_06835;product=invasion regulator SirB2;protein_id=WJG98137.1;transl_table=11 CP118122.1 Genbank gene 1408441 1409250 . + . ID=gene-PUW34_06840;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=PUW34_06840 CP118122.1 Protein Homology CDS 1408441 1409250 . + 0 ID=cds-WJG98138.1;Parent=gene-PUW34_06840;Dbxref=NCBI_GP:WJG98138.1;Name=WJG98138.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=PUW34_06840;product=invasion regulator SirB1;protein_id=WJG98138.1;transl_table=11 CP118122.1 Genbank pseudogene 1409288 1410141 . + . ID=gene-PUW34_06845;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=pseudogene;locus_tag=PUW34_06845;pseudo=true CP118122.1 Protein Homology CDS 1409288 1410141 . + 0 ID=cds-PUW34_06845;Parent=gene-PUW34_06845;Note=frameshifted;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=PUW34_06845;product=3-deoxy-8-phosphooctulonate synthase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1410195 1411295 . - . ID=gene-PUW34_06850;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=PUW34_06850 CP118122.1 Protein Homology CDS 1410195 1411295 . - 0 ID=cds-WJG98139.1;Parent=gene-PUW34_06850;Dbxref=NCBI_GP:WJG98139.1;Name=WJG98139.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=PUW34_06850;product=sodium-potassium/proton antiporter ChaA;protein_id=WJG98139.1;transl_table=11 CP118122.1 Genbank gene 1411562 1411792 . + . ID=gene-PUW34_06855;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=PUW34_06855 CP118122.1 Protein Homology CDS 1411562 1411792 . + 0 ID=cds-WJG98140.1;Parent=gene-PUW34_06855;Dbxref=NCBI_GP:WJG98140.1;Name=WJG98140.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=PUW34_06855;product=putative cation transport regulator ChaB;protein_id=WJG98140.1;transl_table=11 CP118122.1 Genbank gene 1411872 1412225 . - . ID=gene-PUW34_06860;Name=PUW34_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06860 CP118122.1 Protein Homology CDS 1411872 1412225 . - 0 ID=cds-WJG98141.1;Parent=gene-PUW34_06860;Dbxref=NCBI_GP:WJG98141.1;Name=WJG98141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=PUW34_06860;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WJG98141.1;transl_table=11 CP118122.1 Genbank gene 1412402 1413826 . + . ID=gene-PUW34_06865;Name=PUW34_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06865 CP118122.1 Protein Homology CDS 1412402 1413826 . + 0 ID=cds-WJG98142.1;Parent=gene-PUW34_06865;Dbxref=NCBI_GP:WJG98142.1;Name=WJG98142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=PUW34_06865;product=YchO/YchP family invasin;protein_id=WJG98142.1;transl_table=11 CP118122.1 Genbank gene 1413827 1414477 . - . ID=gene-PUW34_06870;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=PUW34_06870 CP118122.1 Protein Homology CDS 1413827 1414477 . - 0 ID=cds-WJG98143.1;Parent=gene-PUW34_06870;Dbxref=NCBI_GP:WJG98143.1;Name=WJG98143.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=PUW34_06870;product=two-component system response regulator NarL;protein_id=WJG98143.1;transl_table=11 CP118122.1 Genbank gene 1414470 1416266 . - . ID=gene-PUW34_06875;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=PUW34_06875 CP118122.1 Protein Homology CDS 1414470 1416266 . - 0 ID=cds-WJG98144.1;Parent=gene-PUW34_06875;Dbxref=NCBI_GP:WJG98144.1;Name=WJG98144.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=PUW34_06875;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WJG98144.1;transl_table=11 CP118122.1 Genbank gene 1416607 1418004 . + . ID=gene-PUW34_06880;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=PUW34_06880 CP118122.1 Protein Homology CDS 1416607 1418004 . + 0 ID=cds-WJG98145.1;Parent=gene-PUW34_06880;Dbxref=NCBI_GP:WJG98145.1;Name=WJG98145.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=PUW34_06880;product=nitrate transporter NarK;protein_id=WJG98145.1;transl_table=11 CP118122.1 Genbank gene 1418392 1422135 . + . ID=gene-PUW34_06885;Name=PUW34_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06885 CP118122.1 Protein Homology CDS 1418392 1422135 . + 0 ID=cds-WJG98146.1;Parent=gene-PUW34_06885;Dbxref=NCBI_GP:WJG98146.1;Name=WJG98146.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=PUW34_06885;product=nitrate reductase subunit alpha;protein_id=WJG98146.1;transl_table=11 CP118122.1 Genbank gene 1422132 1423670 . + . ID=gene-PUW34_06890;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PUW34_06890 CP118122.1 Protein Homology CDS 1422132 1423670 . + 0 ID=cds-WJG98147.1;Parent=gene-PUW34_06890;Dbxref=NCBI_GP:WJG98147.1;Name=WJG98147.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=PUW34_06890;product=nitrate reductase subunit beta;protein_id=WJG98147.1;transl_table=11 CP118122.1 Genbank gene 1423667 1424377 . + . ID=gene-PUW34_06895;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=PUW34_06895 CP118122.1 Protein Homology CDS 1423667 1424377 . + 0 ID=cds-WJG98148.1;Parent=gene-PUW34_06895;Dbxref=NCBI_GP:WJG98148.1;Name=WJG98148.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=PUW34_06895;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WJG98148.1;transl_table=11 CP118122.1 Genbank gene 1424377 1425054 . + . ID=gene-PUW34_06900;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PUW34_06900 CP118122.1 Protein Homology CDS 1424377 1425054 . + 0 ID=cds-WJG98149.1;Parent=gene-PUW34_06900;Dbxref=NCBI_GP:WJG98149.1;Name=WJG98149.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=PUW34_06900;product=respiratory nitrate reductase subunit gamma;protein_id=WJG98149.1;transl_table=11 CP118122.1 Genbank pseudogene 1425296 1426823 . + . ID=gene-PUW34_06905;Name=PUW34_06905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_06905;pseudo=true CP118122.1 Protein Homology CDS 1425296 1426823 . + 0 ID=cds-PUW34_06905;Parent=gene-PUW34_06905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=PUW34_06905;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1426926 1427057 . - . ID=gene-PUW34_06910;Name=PUW34_06910;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW34_06910 CP118122.1 cmsearch ncRNA 1426926 1427057 . - . ID=rna-PUW34_06910;Parent=gene-PUW34_06910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06910;product=RtT sRNA CP118122.1 cmsearch exon 1426926 1427057 . - . ID=exon-PUW34_06910-1;Parent=rna-PUW34_06910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06910;product=RtT sRNA CP118122.1 Genbank gene 1427101 1427231 . - . ID=gene-PUW34_06915;Name=PUW34_06915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW34_06915 CP118122.1 cmsearch ncRNA 1427101 1427231 . - . ID=rna-PUW34_06915;Parent=gene-PUW34_06915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06915;product=RtT sRNA CP118122.1 cmsearch exon 1427101 1427231 . - . ID=exon-PUW34_06915-1;Parent=rna-PUW34_06915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06915;product=RtT sRNA CP118122.1 Genbank gene 1427275 1427406 . - . ID=gene-PUW34_06920;Name=PUW34_06920;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW34_06920 CP118122.1 cmsearch ncRNA 1427275 1427406 . - . ID=rna-PUW34_06920;Parent=gene-PUW34_06920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06920;product=RtT sRNA CP118122.1 cmsearch exon 1427275 1427406 . - . ID=exon-PUW34_06920-1;Parent=rna-PUW34_06920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06920;product=RtT sRNA CP118122.1 Genbank gene 1427450 1427581 . - . ID=gene-PUW34_06925;Name=PUW34_06925;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW34_06925 CP118122.1 cmsearch ncRNA 1427450 1427581 . - . ID=rna-PUW34_06925;Parent=gene-PUW34_06925;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06925;product=RtT sRNA CP118122.1 cmsearch exon 1427450 1427581 . - . ID=exon-PUW34_06925-1;Parent=rna-PUW34_06925;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06925;product=RtT sRNA CP118122.1 Genbank gene 1427625 1427709 . - . ID=gene-PUW34_06930;Name=PUW34_06930;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_06930 CP118122.1 tRNAscan-SE tRNA 1427625 1427709 . - . ID=rna-PUW34_06930;Parent=gene-PUW34_06930;anticodon=(pos:complement(1427673..1427675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_06930;product=tRNA-Tyr CP118122.1 tRNAscan-SE exon 1427625 1427709 . - . ID=exon-PUW34_06930-1;Parent=rna-PUW34_06930;anticodon=(pos:complement(1427673..1427675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_06930;product=tRNA-Tyr CP118122.1 Genbank gene 1427738 1427879 . - . ID=gene-PUW34_06935;Name=PUW34_06935;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW34_06935 CP118122.1 cmsearch ncRNA 1427738 1427879 . - . ID=rna-PUW34_06935;Parent=gene-PUW34_06935;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06935;product=RtT sRNA CP118122.1 cmsearch exon 1427738 1427879 . - . ID=exon-PUW34_06935-1;Parent=rna-PUW34_06935;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_06935;product=RtT sRNA CP118122.1 Genbank gene 1428050 1428892 . - . ID=gene-PUW34_06940;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=PUW34_06940 CP118122.1 Protein Homology CDS 1428050 1428892 . - 0 ID=cds-WJG98150.1;Parent=gene-PUW34_06940;Dbxref=NCBI_GP:WJG98150.1;Name=WJG98150.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=PUW34_06940;product=formyltetrahydrofolate deformylase;protein_id=WJG98150.1;transl_table=11 CP118122.1 Genbank gene 1428943 1429401 . - . ID=gene-PUW34_06945;Name=PUW34_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06945 CP118122.1 Protein Homology CDS 1428943 1429401 . - 0 ID=cds-WJG98151.1;Parent=gene-PUW34_06945;Dbxref=NCBI_GP:WJG98151.1;Name=WJG98151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=PUW34_06945;product=YchJ family protein;protein_id=WJG98151.1;transl_table=11 CP118122.1 Genbank gene 1429512 1430417 . + . ID=gene-PUW34_06950;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=PUW34_06950 CP118122.1 Protein Homology CDS 1429512 1430417 . + 0 ID=cds-WJG98152.1;Parent=gene-PUW34_06950;Dbxref=NCBI_GP:WJG98152.1;Name=WJG98152.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=PUW34_06950;product=patatin-like phospholipase RssA;protein_id=WJG98152.1;transl_table=11 CP118122.1 Genbank gene 1430508 1431521 . + . ID=gene-PUW34_06955;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=PUW34_06955 CP118122.1 Protein Homology CDS 1430508 1431521 . + 0 ID=cds-WJG98153.1;Parent=gene-PUW34_06955;Dbxref=NCBI_GP:WJG98153.1;Name=WJG98153.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=PUW34_06955;product=two-component system response regulator RssB;protein_id=WJG98153.1;transl_table=11 CP118122.1 Genbank gene 1431724 1432632 . + . ID=gene-PUW34_06960;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=PUW34_06960 CP118122.1 Protein Homology CDS 1431724 1432632 . + 0 ID=cds-WJG98154.1;Parent=gene-PUW34_06960;Dbxref=NCBI_GP:WJG98154.1;Name=WJG98154.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=PUW34_06960;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WJG98154.1;transl_table=11 CP118122.1 Genbank gene 1432763 1433176 . - . ID=gene-PUW34_06965;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=PUW34_06965 CP118122.1 Protein Homology CDS 1432763 1433176 . - 0 ID=cds-WJG98155.1;Parent=gene-PUW34_06965;Dbxref=NCBI_GP:WJG98155.1;Name=WJG98155.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=PUW34_06965;product=DNA-binding transcriptional regulator H-NS;protein_id=WJG98155.1;transl_table=11 CP118122.1 Genbank gene 1433839 1434456 . + . ID=gene-PUW34_06970;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=PUW34_06970 CP118122.1 Protein Homology CDS 1433839 1434456 . + 0 ID=cds-WJG98156.1;Parent=gene-PUW34_06970;Dbxref=NCBI_GP:WJG98156.1;Name=WJG98156.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=PUW34_06970;product=thymidine kinase;protein_id=WJG98156.1;transl_table=11 CP118122.1 Genbank pseudogene 1434653 1437330 . - . ID=gene-PUW34_06975;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=pseudogene;gene_synonym=adhC;locus_tag=PUW34_06975;pseudo=true CP118122.1 Protein Homology CDS 1434653 1437330 . - 0 ID=cds-PUW34_06975;Parent=gene-PUW34_06975;Note=frameshifted;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=PUW34_06975;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1437807 1438454 . + . ID=gene-PUW34_06980;Name=PUW34_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_06980 CP118122.1 Protein Homology CDS 1437807 1438454 . + 0 ID=cds-WJG98157.1;Parent=gene-PUW34_06980;Dbxref=NCBI_GP:WJG98157.1;Name=WJG98157.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=PUW34_06980;product=YchE family NAAT transporter;protein_id=WJG98157.1;transl_table=11 CP118122.1 Genbank gene 1439208 1440839 . + . ID=gene-PUW34_06985;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=PUW34_06985 CP118122.1 Protein Homology CDS 1439208 1440839 . + 0 ID=cds-WJG98158.1;Parent=gene-PUW34_06985;Dbxref=NCBI_GP:WJG98158.1;Name=WJG98158.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=PUW34_06985;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WJG98158.1;transl_table=11 CP118122.1 Genbank gene 1440961 1441881 . + . ID=gene-PUW34_06990;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=PUW34_06990 CP118122.1 Protein Homology CDS 1440961 1441881 . + 0 ID=cds-WJG98159.1;Parent=gene-PUW34_06990;Dbxref=NCBI_GP:WJG98159.1;Name=WJG98159.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=PUW34_06990;product=oligopeptide ABC transporter permease OppB;protein_id=WJG98159.1;transl_table=11 CP118122.1 Genbank gene 1441896 1442804 . + . ID=gene-PUW34_06995;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=PUW34_06995 CP118122.1 Protein Homology CDS 1441896 1442804 . + 0 ID=cds-WJG98160.1;Parent=gene-PUW34_06995;Dbxref=NCBI_GP:WJG98160.1;Name=WJG98160.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=PUW34_06995;product=oligopeptide ABC transporter permease OppC;protein_id=WJG98160.1;transl_table=11 CP118122.1 Genbank gene 1442816 1443823 . + . ID=gene-PUW34_07000;Name=PUW34_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07000 CP118122.1 Protein Homology CDS 1442816 1443823 . + 0 ID=cds-WJG98161.1;Parent=gene-PUW34_07000;Dbxref=NCBI_GP:WJG98161.1;Name=WJG98161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=PUW34_07000;product=ABC transporter ATP-binding protein;protein_id=WJG98161.1;transl_table=11 CP118122.1 Genbank gene 1443820 1444824 . + . ID=gene-PUW34_07005;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=PUW34_07005 CP118122.1 Protein Homology CDS 1443820 1444824 . + 0 ID=cds-WJG98162.1;Parent=gene-PUW34_07005;Dbxref=NCBI_GP:WJG98162.1;Name=WJG98162.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=PUW34_07005;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WJG98162.1;transl_table=11 CP118122.1 Genbank gene 1444872 1445708 . + . ID=gene-PUW34_07010;Name=PUW34_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07010 CP118122.1 Protein Homology CDS 1444872 1445708 . + 0 ID=cds-WJG98163.1;Parent=gene-PUW34_07010;Dbxref=NCBI_GP:WJG98163.1;Name=WJG98163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=PUW34_07010;product=ion transporter;protein_id=WJG98163.1;transl_table=11 CP118122.1 Genbank gene 1445756 1446085 . - . ID=gene-PUW34_07015;Name=PUW34_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07015 CP118122.1 Protein Homology CDS 1445756 1446085 . - 0 ID=cds-WJG98942.1;Parent=gene-PUW34_07015;Dbxref=NCBI_GP:WJG98942.1;Name=WJG98942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=PUW34_07015;product=HI1450 family dsDNA-mimic protein;protein_id=WJG98942.1;transl_table=11 CP118122.1 Genbank gene 1446119 1447579 . - . ID=gene-PUW34_07020;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=PUW34_07020 CP118122.1 Protein Homology CDS 1446119 1447579 . - 0 ID=cds-WJG98164.1;Parent=gene-PUW34_07020;Dbxref=NCBI_GP:WJG98164.1;Name=WJG98164.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=PUW34_07020;product=cardiolipin synthase;protein_id=WJG98164.1;transl_table=11 CP118122.1 Genbank gene 1447722 1447895 . + . ID=gene-PUW34_07025;Name=PUW34_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07025 CP118122.1 Protein Homology CDS 1447722 1447895 . + 0 ID=cds-WJG98165.1;Parent=gene-PUW34_07025;Dbxref=NCBI_GP:WJG98165.1;Name=WJG98165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=PUW34_07025;product=YciY family protein;protein_id=WJG98165.1;transl_table=11 CP118122.1 Genbank gene 1447939 1448235 . - . ID=gene-PUW34_07030;Name=PUW34_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07030 CP118122.1 Protein Homology CDS 1447939 1448235 . - 0 ID=cds-WJG98166.1;Parent=gene-PUW34_07030;Dbxref=NCBI_GP:WJG98166.1;Name=WJG98166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=PUW34_07030;product=YciI family protein;protein_id=WJG98166.1;transl_table=11 CP118122.1 Genbank gene 1448459 1449187 . + . ID=gene-PUW34_07035;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=PUW34_07035 CP118122.1 Protein Homology CDS 1448459 1449187 . + 0 ID=cds-WJG98943.1;Parent=gene-PUW34_07035;Dbxref=NCBI_GP:WJG98943.1;Name=WJG98943.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=PUW34_07035;product=TonB system transport protein TonB;protein_id=WJG98943.1;transl_table=11 CP118122.1 Genbank gene 1449246 1449647 . - . ID=gene-PUW34_07040;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=PUW34_07040 CP118122.1 Protein Homology CDS 1449246 1449647 . - 0 ID=cds-WJG98167.1;Parent=gene-PUW34_07040;Dbxref=NCBI_GP:WJG98167.1;Name=WJG98167.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=PUW34_07040;product=acyl-CoA thioester hydrolase YciA;protein_id=WJG98167.1;transl_table=11 CP118122.1 Genbank gene 1449808 1450347 . - . ID=gene-PUW34_07045;Name=PUW34_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07045 CP118122.1 Protein Homology CDS 1449808 1450347 . - 0 ID=cds-WJG98168.1;Parent=gene-PUW34_07045;Dbxref=NCBI_GP:WJG98168.1;Name=WJG98168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=PUW34_07045;product=septation protein A;protein_id=WJG98168.1;transl_table=11 CP118122.1 Genbank gene 1450404 1451147 . - . ID=gene-PUW34_07050;Name=PUW34_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07050 CP118122.1 Protein Homology CDS 1450404 1451147 . - 0 ID=cds-WJG98169.1;Parent=gene-PUW34_07050;Dbxref=NCBI_GP:WJG98169.1;Name=WJG98169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=PUW34_07050;product=YciC family protein;protein_id=WJG98169.1;transl_table=11 CP118122.1 Genbank gene 1451173 1451577 . - . ID=gene-PUW34_07055;Name=PUW34_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07055 CP118122.1 Protein Homology CDS 1451173 1451577 . - 0 ID=cds-WJG98170.1;Parent=gene-PUW34_07055;Dbxref=NCBI_GP:WJG98170.1;Name=WJG98170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=PUW34_07055;product=YkgJ family cysteine cluster protein;protein_id=WJG98170.1;transl_table=11 CP118122.1 Genbank gene 1451915 1452553 . + . ID=gene-PUW34_07060;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=PUW34_07060 CP118122.1 Protein Homology CDS 1451915 1452553 . + 0 ID=cds-WJG98171.1;Parent=gene-PUW34_07060;Dbxref=NCBI_GP:WJG98171.1;Name=WJG98171.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=PUW34_07060;product=outer membrane protein OmpW;protein_id=WJG98171.1;transl_table=11 CP118122.1 Genbank gene 1452635 1453513 . - . ID=gene-PUW34_07065;Name=PUW34_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07065 CP118122.1 Protein Homology CDS 1452635 1453513 . - 0 ID=cds-WJG98172.1;Parent=gene-PUW34_07065;Dbxref=NCBI_GP:WJG98172.1;Name=WJG98172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=PUW34_07065;product=manganese catalase family protein;protein_id=WJG98172.1;transl_table=11 CP118122.1 Genbank gene 1453533 1454039 . - . ID=gene-PUW34_07070;Name=PUW34_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07070 CP118122.1 Protein Homology CDS 1453533 1454039 . - 0 ID=cds-WJG98173.1;Parent=gene-PUW34_07070;Dbxref=NCBI_GP:WJG98173.1;Name=WJG98173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=PUW34_07070;product=ferritin-like domain-containing protein;protein_id=WJG98173.1;transl_table=11 CP118122.1 Genbank gene 1454113 1454616 . - . ID=gene-PUW34_07075;Name=PUW34_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07075 CP118122.1 Protein Homology CDS 1454113 1454616 . - 0 ID=cds-WJG98174.1;Parent=gene-PUW34_07075;Dbxref=NCBI_GP:WJG98174.1;Name=WJG98174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=PUW34_07075;product=ferritin-like domain-containing protein;protein_id=WJG98174.1;transl_table=11 CP118122.1 Genbank gene 1454706 1454888 . - . ID=gene-PUW34_07080;Name=PUW34_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07080 CP118122.1 Protein Homology CDS 1454706 1454888 . - 0 ID=cds-WJG98175.1;Parent=gene-PUW34_07080;Dbxref=NCBI_GP:WJG98175.1;Name=WJG98175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=PUW34_07080;product=general stress protein;protein_id=WJG98175.1;transl_table=11 CP118122.1 Genbank gene 1455368 1456174 . - . ID=gene-PUW34_07085;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=PUW34_07085 CP118122.1 Protein Homology CDS 1455368 1456174 . - 0 ID=cds-WJG98176.1;Parent=gene-PUW34_07085;Dbxref=NCBI_GP:WJG98176.1;Name=WJG98176.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=PUW34_07085;product=tryptophan synthase subunit alpha;protein_id=WJG98176.1;transl_table=11 CP118122.1 Genbank gene 1456174 1457367 . - . ID=gene-PUW34_07090;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=PUW34_07090 CP118122.1 Protein Homology CDS 1456174 1457367 . - 0 ID=cds-WJG98177.1;Parent=gene-PUW34_07090;Dbxref=NCBI_GP:WJG98177.1;Name=WJG98177.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=PUW34_07090;product=tryptophan synthase subunit beta;protein_id=WJG98177.1;transl_table=11 CP118122.1 Genbank gene 1457377 1458735 . - . ID=gene-PUW34_07095;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=PUW34_07095 CP118122.1 Protein Homology CDS 1457377 1458735 . - 0 ID=cds-WJG98178.1;Parent=gene-PUW34_07095;Dbxref=NCBI_GP:WJG98178.1;Name=WJG98178.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=PUW34_07095;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WJG98178.1;transl_table=11 CP118122.1 Genbank gene 1458739 1460334 . - . ID=gene-PUW34_07100;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=PUW34_07100 CP118122.1 Protein Homology CDS 1458739 1460334 . - 0 ID=cds-WJG98179.1;Parent=gene-PUW34_07100;Dbxref=NCBI_GP:WJG98179.1;Name=WJG98179.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=PUW34_07100;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WJG98179.1;transl_table=11 CP118122.1 Genbank gene 1460334 1461896 . - . ID=gene-PUW34_07105;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=PUW34_07105 CP118122.1 Protein Homology CDS 1460334 1461896 . - 0 ID=cds-WJG98180.1;Parent=gene-PUW34_07105;Dbxref=NCBI_GP:WJG98180.1;Name=WJG98180.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=PUW34_07105;product=anthranilate synthase component I;protein_id=WJG98180.1;transl_table=11 CP118122.1 cmsearch sequence_feature 1461919 1462014 . - . ID=id-CP118122.1:1461919..1462014;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118122.1 Genbank gene 1461991 1462035 . - . ID=gene-PUW34_07110;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=PUW34_07110 CP118122.1 Protein Homology CDS 1461991 1462035 . - 0 ID=cds-WJG98944.1;Parent=gene-PUW34_07110;Dbxref=NCBI_GP:WJG98944.1;Name=WJG98944.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=PUW34_07110;product=trp operon leader peptide;protein_id=WJG98944.1;transl_table=11 CP118122.1 Genbank gene 1462157 1463038 . + . ID=gene-PUW34_07115;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=PUW34_07115 CP118122.1 Protein Homology CDS 1462157 1463038 . + 0 ID=cds-WJG98181.1;Parent=gene-PUW34_07115;Dbxref=NCBI_GP:WJG98181.1;Name=WJG98181.1;gbkey=CDS;gene=rnm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=PUW34_07115;product=RNase AM;protein_id=WJG98181.1;transl_table=11 CP118122.1 Genbank gene 1463046 1463666 . + . ID=gene-PUW34_07120;Name=PUW34_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07120 CP118122.1 Protein Homology CDS 1463046 1463666 . + 0 ID=cds-WJG98182.1;Parent=gene-PUW34_07120;Dbxref=NCBI_GP:WJG98182.1;Name=WJG98182.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=PUW34_07120;product=L-threonylcarbamoyladenylate synthase;protein_id=WJG98182.1;transl_table=11 CP118122.1 Genbank gene 1463767 1464642 . + . ID=gene-PUW34_07125;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=PUW34_07125 CP118122.1 Protein Homology CDS 1463767 1464642 . + 0 ID=cds-WJG98183.1;Parent=gene-PUW34_07125;Dbxref=NCBI_GP:WJG98183.1;Name=WJG98183.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=PUW34_07125;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WJG98183.1;transl_table=11 CP118122.1 Genbank pseudogene 1464729 1465319 . - . ID=gene-PUW34_07130;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=pseudogene;locus_tag=PUW34_07130;pseudo=true CP118122.1 Protein Homology CDS 1464729 1465319 . - 0 ID=cds-PUW34_07130;Parent=gene-PUW34_07130;Note=internal stop;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=PUW34_07130;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1465316 1466077 . - . ID=gene-PUW34_07135;Name=PUW34_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07135 CP118122.1 Protein Homology CDS 1465316 1466077 . - 0 ID=cds-WJG98184.1;Parent=gene-PUW34_07135;Dbxref=NCBI_GP:WJG98184.1;Name=WJG98184.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=PUW34_07135;product=YciK family oxidoreductase;protein_id=WJG98184.1;transl_table=11 CP118122.1 Genbank gene 1466314 1467360 . + . ID=gene-PUW34_07140;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=PUW34_07140 CP118122.1 Protein Homology CDS 1466314 1467360 . + 0 ID=cds-WJG98185.1;Parent=gene-PUW34_07140;Dbxref=NCBI_GP:WJG98185.1;Name=WJG98185.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=PUW34_07140;product=protease SohB;protein_id=WJG98185.1;transl_table=11 CP118122.1 Genbank gene 1467402 1467653 . - . ID=gene-PUW34_07145;Name=PUW34_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07145 CP118122.1 Protein Homology CDS 1467402 1467653 . - 0 ID=cds-WJG98186.1;Parent=gene-PUW34_07145;Dbxref=NCBI_GP:WJG98186.1;Name=WJG98186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=PUW34_07145;product=YciN family protein;protein_id=WJG98186.1;transl_table=11 CP118122.1 Genbank gene 1468056 1470653 . + . ID=gene-PUW34_07150;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=PUW34_07150 CP118122.1 Protein Homology CDS 1468056 1470653 . + 0 ID=cds-WJG98187.1;Parent=gene-PUW34_07150;Dbxref=NCBI_GP:WJG98187.1;Name=WJG98187.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=PUW34_07150;product=type I DNA topoisomerase;protein_id=WJG98187.1;transl_table=11 CP118122.1 Genbank gene 1471064 1472038 . + . ID=gene-PUW34_07155;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=PUW34_07155 CP118122.1 Protein Homology CDS 1471064 1472038 . + 0 ID=cds-WJG98188.1;Parent=gene-PUW34_07155;Dbxref=NCBI_GP:WJG98188.1;Name=WJG98188.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=PUW34_07155;product=HTH-type transcriptional regulator CysB;protein_id=WJG98188.1;transl_table=11 CP118122.1 Genbank gene 1472319 1472459 . + . ID=gene-PUW34_07160;Name=PUW34_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07160 CP118122.1 Protein Homology CDS 1472319 1472459 . + 0 ID=cds-WJG98945.1;Parent=gene-PUW34_07160;Dbxref=NCBI_GP:WJG98945.1;Name=WJG98945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=PUW34_07160;product=YmiA family putative membrane protein;protein_id=WJG98945.1;transl_table=11 CP118122.1 Genbank gene 1472460 1472630 . + . ID=gene-PUW34_07165;Name=PUW34_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07165 CP118122.1 Protein Homology CDS 1472460 1472630 . + 0 ID=cds-WJG98189.1;Parent=gene-PUW34_07165;Dbxref=NCBI_GP:WJG98189.1;Name=WJG98189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=PUW34_07165;product=hypothetical protein;protein_id=WJG98189.1;transl_table=11 CP118122.1 Genbank gene 1472740 1472832 . + . ID=gene-PUW34_07170;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=PUW34_07170 CP118122.1 Protein Homology CDS 1472740 1472832 . + 0 ID=cds-WJG98190.1;Parent=gene-PUW34_07170;Dbxref=NCBI_GP:WJG98190.1;Name=WJG98190.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096370.1;locus_tag=PUW34_07170;product=small membrane protein YmiC;protein_id=WJG98190.1;transl_table=11 CP118122.1 Genbank gene 1473015 1475690 . + . ID=gene-PUW34_07175;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=PUW34_07175 CP118122.1 Protein Homology CDS 1473015 1475690 . + 0 ID=cds-WJG98191.1;Parent=gene-PUW34_07175;Dbxref=NCBI_GP:WJG98191.1;Name=WJG98191.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=PUW34_07175;product=aconitate hydratase AcnA;protein_id=WJG98191.1;transl_table=11 CP118122.1 Genbank gene 1475746 1476336 . - . ID=gene-PUW34_07180;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=PUW34_07180 CP118122.1 Protein Homology CDS 1475746 1476336 . - 0 ID=cds-WJG98192.1;Parent=gene-PUW34_07180;Dbxref=NCBI_GP:WJG98192.1;Name=WJG98192.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=PUW34_07180;product=GTP cyclohydrolase II;protein_id=WJG98192.1;transl_table=11 CP118122.1 Genbank gene 1476532 1477296 . + . ID=gene-PUW34_07185;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=PUW34_07185 CP118122.1 Protein Homology CDS 1476532 1477296 . + 0 ID=cds-WJG98193.1;Parent=gene-PUW34_07185;Dbxref=NCBI_GP:WJG98193.1;Name=WJG98193.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=PUW34_07185;product=phosphatidylglycerophosphatase B;protein_id=WJG98193.1;transl_table=11 CP118122.1 Genbank gene 1477445 1477753 . + . ID=gene-PUW34_07190;Name=PUW34_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07190 CP118122.1 Protein Homology CDS 1477445 1477753 . + 0 ID=cds-WJG98194.1;Parent=gene-PUW34_07190;Dbxref=NCBI_GP:WJG98194.1;Name=WJG98194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=PUW34_07190;product=LapA family protein;protein_id=WJG98194.1;transl_table=11 CP118122.1 Genbank gene 1477760 1478929 . + . ID=gene-PUW34_07195;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=PUW34_07195 CP118122.1 Protein Homology CDS 1477760 1478929 . + 0 ID=cds-WJG98195.1;Parent=gene-PUW34_07195;Dbxref=NCBI_GP:WJG98195.1;Name=WJG98195.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=PUW34_07195;product=lipopolysaccharide assembly protein LapB;protein_id=WJG98195.1;transl_table=11 CP118122.1 Genbank gene 1479120 1479857 . + . ID=gene-PUW34_07200;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=PUW34_07200 CP118122.1 Protein Homology CDS 1479120 1479857 . + 0 ID=cds-WJG98196.1;Parent=gene-PUW34_07200;Dbxref=NCBI_GP:WJG98196.1;Name=WJG98196.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=PUW34_07200;product=orotidine-5'-phosphate decarboxylase;protein_id=WJG98196.1;transl_table=11 CP118122.1 Genbank gene 1479857 1480183 . + . ID=gene-PUW34_07205;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=PUW34_07205 CP118122.1 Protein Homology CDS 1479857 1480183 . + 0 ID=cds-WJG98197.1;Parent=gene-PUW34_07205;Dbxref=NCBI_GP:WJG98197.1;Name=WJG98197.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=PUW34_07205;product=stress response translation initiation inhibitor YciH;protein_id=WJG98197.1;transl_table=11 CP118122.1 Genbank gene 1480303 1480521 . - . ID=gene-PUW34_07210;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=PUW34_07210 CP118122.1 Protein Homology CDS 1480303 1480521 . - 0 ID=cds-WJG98198.1;Parent=gene-PUW34_07210;Dbxref=NCBI_GP:WJG98198.1;Name=WJG98198.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=PUW34_07210;product=osmotically-inducible lipoprotein OsmB;protein_id=WJG98198.1;transl_table=11 CP118122.1 Genbank pseudogene 1480780 1481531 . - . ID=gene-PUW34_07215;Name=PUW34_07215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07215;pseudo=true CP118122.1 Protein Homology CDS 1480780 1481531 . - 0 ID=cds-PUW34_07215;Parent=gene-PUW34_07215;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=PUW34_07215;product=DNA-binding transcriptional regulator YciT;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1481618 1481797 . - . ID=gene-PUW34_07220;Name=PUW34_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07220 CP118122.1 Protein Homology CDS 1481618 1481797 . - 0 ID=cds-WJG98199.1;Parent=gene-PUW34_07220;Dbxref=NCBI_GP:WJG98199.1;Name=WJG98199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=PUW34_07220;product=hypothetical protein;protein_id=WJG98199.1;transl_table=11 CP118122.1 Genbank gene 1481919 1483901 . - . ID=gene-PUW34_07225;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=PUW34_07225 CP118122.1 Protein Homology CDS 1481919 1483901 . - 0 ID=cds-WJG98200.1;Parent=gene-PUW34_07225;Dbxref=NCBI_GP:WJG98200.1;Name=WJG98200.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=PUW34_07225;product=cyclic di-GMP phosphodiesterase;protein_id=WJG98200.1;transl_table=11 CP118122.1 Genbank gene 1484163 1486097 . - . ID=gene-PUW34_07230;Name=PUW34_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07230 CP118122.1 Protein Homology CDS 1484163 1486097 . - 0 ID=cds-WJG98201.1;Parent=gene-PUW34_07230;Dbxref=NCBI_GP:WJG98201.1;Name=WJG98201.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=PUW34_07230;product=exoribonuclease II;protein_id=WJG98201.1;transl_table=11 CP118122.1 Genbank pseudogene 1486342 1487323 . - . ID=gene-PUW34_07235;Name=PUW34_07235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07235;pseudo=true CP118122.1 Protein Homology CDS 1486342 1487323 . - 0 ID=cds-PUW34_07235;Parent=gene-PUW34_07235;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=PUW34_07235;product=CMD domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1487523 1488311 . - . ID=gene-PUW34_07240;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=PUW34_07240 CP118122.1 Protein Homology CDS 1487523 1488311 . - 0 ID=cds-WJG98202.1;Parent=gene-PUW34_07240;Dbxref=NCBI_GP:WJG98202.1;Name=WJG98202.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=PUW34_07240;product=enoyl-ACP reductase FabI;protein_id=WJG98202.1;transl_table=11 CP118122.1 Genbank pseudogene 1488429 1488727 . - . ID=gene-PUW34_07245;Name=PUW34_07245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07245;pseudo=true CP118122.1 Protein Homology CDS 1488429 1488727 . - 0 ID=cds-PUW34_07245;Parent=gene-PUW34_07245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=PUW34_07245;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1488702 1488881 . - . ID=gene-PUW34_07250;Name=PUW34_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07250 CP118122.1 Protein Homology CDS 1488702 1488881 . - 0 ID=cds-WJG98203.1;Parent=gene-PUW34_07250;Dbxref=NCBI_GP:WJG98203.1;Name=WJG98203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=PUW34_07250;product=hypothetical protein;protein_id=WJG98203.1;transl_table=11 CP118122.1 Genbank pseudogene 1488916 1490287 . + . ID=gene-PUW34_07255;Name=steC;gbkey=Gene;gene=steC;gene_biotype=pseudogene;locus_tag=PUW34_07255;pseudo=true CP118122.1 Protein Homology CDS 1488916 1490287 . + 0 ID=cds-PUW34_07255;Parent=gene-PUW34_07255;Note=frameshifted;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=PUW34_07255;product=SPI-2 type III secretion system effector kinase SteC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1490755 1491462 . + . ID=gene-PUW34_07260;Name=PUW34_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07260 CP118122.1 Protein Homology CDS 1490755 1491462 . + 0 ID=cds-WJG98204.1;Parent=gene-PUW34_07260;Dbxref=NCBI_GP:WJG98204.1;Name=WJG98204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=PUW34_07260;product=EAL domain-containing protein;protein_id=WJG98204.1;transl_table=11 CP118122.1 Genbank gene 1491478 1492284 . - . ID=gene-PUW34_07265;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=PUW34_07265 CP118122.1 Protein Homology CDS 1491478 1492284 . - 0 ID=cds-WJG98205.1;Parent=gene-PUW34_07265;Dbxref=NCBI_GP:WJG98205.1;Name=WJG98205.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=PUW34_07265;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WJG98205.1;transl_table=11 CP118122.1 Genbank gene 1492286 1493278 . - . ID=gene-PUW34_07270;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=PUW34_07270 CP118122.1 Protein Homology CDS 1492286 1493278 . - 0 ID=cds-WJG98206.1;Parent=gene-PUW34_07270;Dbxref=NCBI_GP:WJG98206.1;Name=WJG98206.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=PUW34_07270;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WJG98206.1;transl_table=11 CP118122.1 Genbank gene 1493278 1494168 . - . ID=gene-PUW34_07275;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=PUW34_07275 CP118122.1 Protein Homology CDS 1493278 1494168 . - 0 ID=cds-WJG98207.1;Parent=gene-PUW34_07275;Dbxref=NCBI_GP:WJG98207.1;Name=WJG98207.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=PUW34_07275;product=peptide ABC transporter permease SapC;protein_id=WJG98207.1;transl_table=11 CP118122.1 Genbank gene 1494155 1495120 . - . ID=gene-PUW34_07280;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=PUW34_07280 CP118122.1 Protein Homology CDS 1494155 1495120 . - 0 ID=cds-WJG98208.1;Parent=gene-PUW34_07280;Dbxref=NCBI_GP:WJG98208.1;Name=WJG98208.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=PUW34_07280;product=peptide ABC transporter permease SapB;protein_id=WJG98208.1;transl_table=11 CP118122.1 Genbank gene 1495117 1496766 . - . ID=gene-PUW34_07285;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=PUW34_07285 CP118122.1 Protein Homology CDS 1495117 1496766 . - 0 ID=cds-WJG98209.1;Parent=gene-PUW34_07285;Dbxref=NCBI_GP:WJG98209.1;Name=WJG98209.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=PUW34_07285;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WJG98209.1;transl_table=11 CP118122.1 Genbank pseudogene 1496878 1497857 . - . ID=gene-PUW34_07290;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=pseudogene;locus_tag=PUW34_07290;pseudo=true CP118122.1 Protein Homology CDS 1496878 1497857 . - 0 ID=cds-PUW34_07290;Parent=gene-PUW34_07290;Note=frameshifted;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=PUW34_07290;product=phage shock protein operon transcriptional activator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1498028 1498696 . + . ID=gene-PUW34_07295;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=PUW34_07295 CP118122.1 Protein Homology CDS 1498028 1498696 . + 0 ID=cds-WJG98210.1;Parent=gene-PUW34_07295;Dbxref=NCBI_GP:WJG98210.1;Name=WJG98210.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=PUW34_07295;product=phage shock protein PspA;protein_id=WJG98210.1;transl_table=11 CP118122.1 Genbank gene 1498756 1498980 . + . ID=gene-PUW34_07300;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=PUW34_07300 CP118122.1 Protein Homology CDS 1498756 1498980 . + 0 ID=cds-WJG98211.1;Parent=gene-PUW34_07300;Dbxref=NCBI_GP:WJG98211.1;Name=WJG98211.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=PUW34_07300;product=envelope stress response membrane protein PspB;protein_id=WJG98211.1;transl_table=11 CP118122.1 Genbank gene 1498980 1499339 . + . ID=gene-PUW34_07305;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=PUW34_07305 CP118122.1 Protein Homology CDS 1498980 1499339 . + 0 ID=cds-WJG98212.1;Parent=gene-PUW34_07305;Dbxref=NCBI_GP:WJG98212.1;Name=WJG98212.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=PUW34_07305;product=envelope stress response membrane protein PspC;protein_id=WJG98212.1;transl_table=11 CP118122.1 Genbank gene 1499362 1499580 . + . ID=gene-PUW34_07310;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=PUW34_07310 CP118122.1 Protein Homology CDS 1499362 1499580 . + 0 ID=cds-WJG98213.1;Parent=gene-PUW34_07310;Dbxref=NCBI_GP:WJG98213.1;Name=WJG98213.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=PUW34_07310;product=phage shock protein PspD;protein_id=WJG98213.1;transl_table=11 CP118122.1 Genbank gene 1499656 1499970 . + . ID=gene-PUW34_07315;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=PUW34_07315 CP118122.1 Protein Homology CDS 1499656 1499970 . + 0 ID=cds-WJG98214.1;Parent=gene-PUW34_07315;Dbxref=NCBI_GP:WJG98214.1;Name=WJG98214.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=PUW34_07315;product=thiosulfate sulfurtransferase PspE;protein_id=WJG98214.1;transl_table=11 CP118122.1 Genbank pseudogene 1500119 1501515 . + . ID=gene-PUW34_07320;Name=PUW34_07320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07320;pseudo=true CP118122.1 Protein Homology CDS 1500119 1501515 . + 0 ID=cds-PUW34_07320;Parent=gene-PUW34_07320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=PUW34_07320;product=YcjX family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1501512 1502573 . + . ID=gene-PUW34_07325;Name=PUW34_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07325 CP118122.1 Protein Homology CDS 1501512 1502573 . + 0 ID=cds-WJG98215.1;Parent=gene-PUW34_07325;Dbxref=NCBI_GP:WJG98215.1;Name=WJG98215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=PUW34_07325;product=YcjF family protein;protein_id=WJG98215.1;transl_table=11 CP118122.1 Genbank gene 1502721 1504262 . + . ID=gene-PUW34_07330;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=PUW34_07330 CP118122.1 Protein Homology CDS 1502721 1504262 . + 0 ID=cds-WJG98216.1;Parent=gene-PUW34_07330;Dbxref=NCBI_GP:WJG98216.1;Name=WJG98216.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=PUW34_07330;product=transcriptional regulator TyrR;protein_id=WJG98216.1;transl_table=11 CP118122.1 Genbank gene 1504352 1504858 . - . ID=gene-PUW34_07335;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=PUW34_07335 CP118122.1 Protein Homology CDS 1504352 1504858 . - 0 ID=cds-WJG98217.1;Parent=gene-PUW34_07335;Dbxref=NCBI_GP:WJG98217.1;Name=WJG98217.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=PUW34_07335;product=thiol peroxidase;protein_id=WJG98217.1;transl_table=11 CP118122.1 Genbank pseudogene 1504974 1505938 . + . ID=gene-PUW34_07340;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=pseudogene;locus_tag=PUW34_07340;pseudo=true CP118122.1 Protein Homology CDS 1504974 1505938 . + 0 ID=cds-PUW34_07340;Parent=gene-PUW34_07340;Note=frameshifted;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=PUW34_07340;product=L-Ala-D/L-Glu epimerase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1505913 1506641 . - . ID=gene-PUW34_07345;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=PUW34_07345 CP118122.1 Protein Homology CDS 1505913 1506641 . - 0 ID=cds-WJG98218.1;Parent=gene-PUW34_07345;Dbxref=NCBI_GP:WJG98218.1;Name=WJG98218.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=PUW34_07345;product=murein tripeptide amidase MpaA;protein_id=WJG98218.1;transl_table=11 CP118122.1 Genbank gene 1506831 1508444 . + . ID=gene-PUW34_07350;Name=PUW34_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07350 CP118122.1 Protein Homology CDS 1506831 1508444 . + 0 ID=cds-WJG98219.1;Parent=gene-PUW34_07350;Dbxref=NCBI_GP:WJG98219.1;Name=WJG98219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=PUW34_07350;product=peptide ABC transporter substrate-binding protein;protein_id=WJG98219.1;transl_table=11 CP118122.1 Genbank pseudogene 1508541 1509469 . - . ID=gene-PUW34_07355;Name=PUW34_07355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07355;pseudo=true CP118122.1 Protein Homology CDS 1508541 1509469 . - 0 ID=cds-PUW34_07355;Parent=gene-PUW34_07355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=PUW34_07355;product=aromatic alcohol reductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1509588 1510493 . + . ID=gene-PUW34_07360;Name=PUW34_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07360 CP118122.1 Protein Homology CDS 1509588 1510493 . + 0 ID=cds-WJG98220.1;Parent=gene-PUW34_07360;Dbxref=NCBI_GP:WJG98220.1;Name=WJG98220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=PUW34_07360;product=LysR family transcriptional regulator;protein_id=WJG98220.1;transl_table=11 CP118122.1 Genbank pseudogene 1510769 1511637 . + . ID=gene-PUW34_07365;Name=PUW34_07365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07365;pseudo=true CP118122.1 Protein Homology CDS 1510769 1511637 . + 0 ID=cds-PUW34_07365;Parent=gene-PUW34_07365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=PUW34_07365;product=aldo/keto reductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1511728 1512441 . - . ID=gene-PUW34_07370;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=PUW34_07370 CP118122.1 Protein Homology CDS 1511728 1512441 . - 0 ID=cds-WJG98221.1;Parent=gene-PUW34_07370;Dbxref=NCBI_GP:WJG98221.1;Name=WJG98221.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=PUW34_07370;product=SDR family oxidoreductase;protein_id=WJG98221.1;transl_table=11 CP118122.1 Genbank gene 1512519 1513109 . + . ID=gene-PUW34_07375;Name=PUW34_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07375 CP118122.1 Protein Homology CDS 1512519 1513109 . + 0 ID=cds-WJG98222.1;Parent=gene-PUW34_07375;Dbxref=NCBI_GP:WJG98222.1;Name=WJG98222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=PUW34_07375;product=TetR/AcrR family transcriptional regulator;protein_id=WJG98222.1;transl_table=11 CP118122.1 Genbank gene 1513238 1513474 . + . ID=gene-PUW34_07380;Name=PUW34_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07380 CP118122.1 Protein Homology CDS 1513238 1513474 . + 0 ID=cds-WJG98223.1;Parent=gene-PUW34_07380;Dbxref=NCBI_GP:WJG98223.1;Name=WJG98223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=PUW34_07380;product=YgdI/YgdR family lipoprotein;protein_id=WJG98223.1;transl_table=11 CP118122.1 Genbank gene 1513688 1514797 . - . ID=gene-PUW34_07385;Name=PUW34_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07385 CP118122.1 Protein Homology CDS 1513688 1514797 . - 0 ID=cds-WJG98946.1;Parent=gene-PUW34_07385;Dbxref=NCBI_GP:WJG98946.1;Name=WJG98946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=PUW34_07385;product=hypothetical protein;protein_id=WJG98946.1;transl_table=11 CP118122.1 Genbank gene 1515189 1516046 . - . ID=gene-PUW34_07390;Name=PUW34_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07390 CP118122.1 Protein Homology CDS 1515189 1516046 . - 0 ID=cds-WJG98224.1;Parent=gene-PUW34_07390;Dbxref=NCBI_GP:WJG98224.1;Name=WJG98224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=PUW34_07390;product=GyrI-like domain-containing protein;protein_id=WJG98224.1;transl_table=11 CP118122.1 Genbank pseudogene 1516340 1517184 . + . ID=gene-PUW34_07395;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=pseudogene;locus_tag=PUW34_07395;pseudo=true CP118122.1 Protein Homology CDS 1516340 1517184 . + 0 ID=cds-PUW34_07395;Parent=gene-PUW34_07395;Note=frameshifted;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=PUW34_07395;product=two-partner-like secretion system exoprotein ZirU;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1517259 1519234 . + . ID=gene-PUW34_07400;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=pseudogene;locus_tag=PUW34_07400;pseudo=true CP118122.1 Protein Homology CDS 1517259 1519234 . + 0 ID=cds-PUW34_07400;Parent=gene-PUW34_07400;Note=frameshifted;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=PUW34_07400;product=two-partner secretion translocator ZirT;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1519255 1520085 . + . ID=gene-PUW34_07405;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=PUW34_07405 CP118122.1 Protein Homology CDS 1519255 1520085 . + 0 ID=cds-WJG98225.1;Parent=gene-PUW34_07405;Dbxref=NCBI_GP:WJG98225.1;Name=WJG98225.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=PUW34_07405;product=two-partner-like secretion system exoprotein ZirS;protein_id=WJG98225.1;transl_table=11 CP118122.1 Genbank pseudogene 1520184 1520546 . + . ID=gene-PUW34_07410;Name=PUW34_07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07410;pseudo=true CP118122.1 Protein Homology CDS 1520184 1520546 . + 0 ID=cds-PUW34_07410;Parent=gene-PUW34_07410;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=PUW34_07410;product=peroxiredoxin;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1520473 1521183 . - . ID=gene-PUW34_07415;Name=PUW34_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07415 CP118122.1 Protein Homology CDS 1520473 1521183 . - 0 ID=cds-WJG98226.1;Parent=gene-PUW34_07415;Dbxref=NCBI_GP:WJG98226.1;Name=WJG98226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=PUW34_07415;product=B3/4 domain-containing protein;protein_id=WJG98226.1;transl_table=11 CP118122.1 Genbank gene 1521227 1521829 . + . ID=gene-PUW34_07420;Name=PUW34_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07420 CP118122.1 Protein Homology CDS 1521227 1521829 . + 0 ID=cds-WJG98227.1;Parent=gene-PUW34_07420;Dbxref=NCBI_GP:WJG98227.1;Name=WJG98227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=PUW34_07420;product=helix-turn-helix domain-containing protein;protein_id=WJG98227.1;transl_table=11 CP118122.1 Genbank gene 1521911 1522942 . - . ID=gene-PUW34_07425;Name=PUW34_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07425 CP118122.1 Protein Homology CDS 1521911 1522942 . - 0 ID=cds-WJG98228.1;Parent=gene-PUW34_07425;Dbxref=NCBI_GP:WJG98228.1;Name=WJG98228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=PUW34_07425;product=mechanosensitive ion channel family protein;protein_id=WJG98228.1;transl_table=11 CP118122.1 Genbank gene 1523181 1523435 . + . ID=gene-PUW34_07430;Name=PUW34_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07430 CP118122.1 Protein Homology CDS 1523181 1523435 . + 0 ID=cds-WJG98229.1;Parent=gene-PUW34_07430;Dbxref=NCBI_GP:WJG98229.1;Name=WJG98229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=PUW34_07430;product=DUF2534 family protein;protein_id=WJG98229.1;transl_table=11 CP118122.1 Genbank gene 1523490 1524437 . - . ID=gene-PUW34_07435;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=PUW34_07435 CP118122.1 Protein Homology CDS 1523490 1524437 . - 0 ID=cds-WJG98230.1;Parent=gene-PUW34_07435;Dbxref=NCBI_GP:WJG98230.1;Name=WJG98230.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=PUW34_07435;product=universal stress protein UspE;protein_id=WJG98230.1;transl_table=11 CP118122.1 Genbank pseudogene 1524588 1525339 . - . ID=gene-PUW34_07440;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=pseudogene;locus_tag=PUW34_07440;pseudo=true CP118122.1 Protein Homology CDS 1524588 1525339 . - 0 ID=cds-PUW34_07440;Parent=gene-PUW34_07440;Note=frameshifted;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=PUW34_07440;product=fumarate/nitrate reduction transcriptional regulator Fnr;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1525535 1526050 . - . ID=gene-PUW34_07445;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=PUW34_07445 CP118122.1 Protein Homology CDS 1525535 1526050 . - 0 ID=cds-WJG98231.1;Parent=gene-PUW34_07445;Dbxref=NCBI_GP:WJG98231.1;Name=WJG98231.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=PUW34_07445;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WJG98231.1;transl_table=11 CP118122.1 Genbank gene 1526308 1526871 . + . ID=gene-PUW34_07450;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=PUW34_07450 CP118122.1 Protein Homology CDS 1526308 1526871 . + 0 ID=cds-WJG98232.1;Parent=gene-PUW34_07450;Dbxref=NCBI_GP:WJG98232.1;Name=WJG98232.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=PUW34_07450;product=DNA endonuclease SmrA;protein_id=WJG98232.1;transl_table=11 CP118122.1 Genbank gene 1527282 1528436 . + . ID=gene-PUW34_07455;Name=PUW34_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07455 CP118122.1 Protein Homology CDS 1527282 1528436 . + 0 ID=cds-WJG98233.1;Parent=gene-PUW34_07455;Dbxref=NCBI_GP:WJG98233.1;Name=WJG98233.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=PUW34_07455;product=methyl-accepting chemotaxis protein;protein_id=WJG98233.1;transl_table=11 CP118122.1 Genbank gene 1528591 1529565 . + . ID=gene-PUW34_07460;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=PUW34_07460 CP118122.1 Protein Homology CDS 1528591 1529565 . + 0 ID=cds-WJG98947.1;Parent=gene-PUW34_07460;Dbxref=NCBI_GP:WJG98947.1;Name=WJG98947.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=PUW34_07460;product=zinc transporter ZntB;protein_id=WJG98947.1;transl_table=11 CP118122.1 Genbank gene 1529840 1530022 . + . ID=gene-PUW34_07465;Name=PUW34_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07465 CP118122.1 Protein Homology CDS 1529840 1530022 . + 0 ID=cds-WJG98234.1;Parent=gene-PUW34_07465;Dbxref=NCBI_GP:WJG98234.1;Name=WJG98234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=PUW34_07465;product=hypothetical protein;protein_id=WJG98234.1;transl_table=11 CP118122.1 Genbank gene 1530051 1531424 . + . ID=gene-PUW34_07470;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=PUW34_07470 CP118122.1 Protein Homology CDS 1530051 1531424 . + 0 ID=cds-WJG98235.1;Parent=gene-PUW34_07470;Dbxref=NCBI_GP:WJG98235.1;Name=WJG98235.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=PUW34_07470;product=ATP-dependent RNA helicase DbpA;protein_id=WJG98235.1;transl_table=11 CP118122.1 Genbank gene 1531468 1532403 . - . ID=gene-PUW34_07475;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=PUW34_07475 CP118122.1 Protein Homology CDS 1531468 1532403 . - 0 ID=cds-WJG98236.1;Parent=gene-PUW34_07475;Dbxref=NCBI_GP:WJG98236.1;Name=WJG98236.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=PUW34_07475;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WJG98236.1;transl_table=11 CP118122.1 Genbank pseudogene 1532455 1532658 . - . ID=gene-PUW34_07480;Name=PUW34_07480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07480;pseudo=true CP118122.1 Protein Homology CDS 1532455 1532658 . - 0 ID=cds-PUW34_07480;Parent=gene-PUW34_07480;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=PUW34_07480;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1532759 1533097 . + . ID=gene-PUW34_07485;Name=PUW34_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07485 CP118122.1 Protein Homology CDS 1532759 1533097 . + 0 ID=cds-WJG98237.1;Parent=gene-PUW34_07485;Dbxref=NCBI_GP:WJG98237.1;Name=WJG98237.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=PUW34_07485;product=SMR family transporter;protein_id=WJG98237.1;transl_table=11 CP118122.1 Genbank gene 1533147 1533581 . - . ID=gene-PUW34_07490;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=PUW34_07490 CP118122.1 Protein Homology CDS 1533147 1533581 . - 0 ID=cds-WJG98238.1;Parent=gene-PUW34_07490;Dbxref=NCBI_GP:WJG98238.1;Name=WJG98238.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=PUW34_07490;product=universal stress protein UspF;protein_id=WJG98238.1;transl_table=11 CP118122.1 Genbank pseudogene 1534062 1537587 . - . ID=gene-PUW34_07495;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=pseudogene;locus_tag=PUW34_07495;pseudo=true CP118122.1 Protein Homology CDS 1534062 1537587 . - 0 ID=cds-PUW34_07495;Parent=gene-PUW34_07495;Note=frameshifted;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=PUW34_07495;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1537648 1537947 . - . ID=gene-PUW34_07500;Name=PUW34_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07500 CP118122.1 Protein Homology CDS 1537648 1537947 . - 0 ID=cds-WJG98239.1;Parent=gene-PUW34_07500;Dbxref=NCBI_GP:WJG98239.1;Name=WJG98239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=PUW34_07500;product=reverse transcriptase;protein_id=WJG98239.1;transl_table=11 CP118122.1 Genbank gene 1537863 1538129 . + . ID=gene-PUW34_07505;Name=PUW34_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07505 CP118122.1 Protein Homology CDS 1537863 1538129 . + 0 ID=cds-WJG98240.1;Parent=gene-PUW34_07505;Dbxref=NCBI_GP:WJG98240.1;Name=WJG98240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=PUW34_07505;product=DUF333 domain-containing protein;protein_id=WJG98240.1;transl_table=11 CP118122.1 Genbank gene 1538173 1538583 . - . ID=gene-PUW34_07510;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=PUW34_07510 CP118122.1 Protein Homology CDS 1538173 1538583 . - 0 ID=cds-WJG98241.1;Parent=gene-PUW34_07510;Dbxref=NCBI_GP:WJG98241.1;Name=WJG98241.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=PUW34_07510;product=heat shock protein HslJ;protein_id=WJG98241.1;transl_table=11 CP118122.1 Genbank gene 1538694 1539683 . - . ID=gene-PUW34_07515;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=PUW34_07515 CP118122.1 Protein Homology CDS 1538694 1539683 . - 0 ID=cds-WJG98242.1;Parent=gene-PUW34_07515;Dbxref=NCBI_GP:WJG98242.1;Name=WJG98242.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=PUW34_07515;product=D-lactate dehydrogenase;protein_id=WJG98242.1;transl_table=11 CP118122.1 Genbank gene 1539923 1542559 . + . ID=gene-PUW34_07520;Name=PUW34_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07520 CP118122.1 Protein Homology CDS 1539923 1542559 . + 0 ID=cds-WJG98243.1;Parent=gene-PUW34_07520;Dbxref=NCBI_GP:WJG98243.1;Name=WJG98243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=PUW34_07520;product=YdbH family protein;protein_id=WJG98243.1;transl_table=11 CP118122.1 Genbank gene 1542559 1542750 . + . ID=gene-PUW34_07525;Name=PUW34_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07525 CP118122.1 Protein Homology CDS 1542559 1542750 . + 0 ID=cds-WJG98244.1;Parent=gene-PUW34_07525;Dbxref=NCBI_GP:WJG98244.1;Name=WJG98244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=PUW34_07525;product=YnbE family lipoprotein;protein_id=WJG98244.1;transl_table=11 CP118122.1 Genbank gene 1542758 1543081 . + . ID=gene-PUW34_07530;Name=PUW34_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07530 CP118122.1 Protein Homology CDS 1542758 1543081 . + 0 ID=cds-WJG98245.1;Parent=gene-PUW34_07530;Dbxref=NCBI_GP:WJG98245.1;Name=WJG98245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=PUW34_07530;product=YdbL family protein;protein_id=WJG98245.1;transl_table=11 CP118122.1 Genbank gene 1543224 1543673 . + . ID=gene-PUW34_07535;Name=PUW34_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07535 CP118122.1 Protein Homology CDS 1543224 1543673 . + 0 ID=cds-WJG98246.1;Parent=gene-PUW34_07535;Dbxref=NCBI_GP:WJG98246.1;Name=WJG98246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=PUW34_07535;product=GFA family protein;protein_id=WJG98246.1;transl_table=11 CP118122.1 Genbank gene 1543670 1544275 . - . ID=gene-PUW34_07540;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=PUW34_07540 CP118122.1 Protein Homology CDS 1543670 1544275 . - 0 ID=cds-WJG98247.1;Parent=gene-PUW34_07540;Dbxref=NCBI_GP:WJG98247.1;Name=WJG98247.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=PUW34_07540;product=FMN-dependent NADH-azoreductase;protein_id=WJG98247.1;transl_table=11 CP118122.1 Genbank pseudogene 1544476 1548375 . + . ID=gene-PUW34_07545;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=pseudogene;locus_tag=PUW34_07545;pseudo=true CP118122.1 Protein Homology CDS 1544476 1548375 . + 0 ID=cds-PUW34_07545;Parent=gene-PUW34_07545;Note=frameshifted;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=PUW34_07545;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1548439 1549239 . + . ID=gene-PUW34_07550;Name=PUW34_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07550 CP118122.1 Protein Homology CDS 1548439 1549239 . + 0 ID=cds-WJG98248.1;Parent=gene-PUW34_07550;Dbxref=NCBI_GP:WJG98248.1;Name=WJG98248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=PUW34_07550;product=YdcF family protein;protein_id=WJG98248.1;transl_table=11 CP118122.1 Genbank gene 1549356 1549886 . + . ID=gene-PUW34_07555;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=PUW34_07555 CP118122.1 Protein Homology CDS 1549356 1549886 . + 0 ID=cds-WJG98249.1;Parent=gene-PUW34_07555;Dbxref=NCBI_GP:WJG98249.1;Name=WJG98249.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=PUW34_07555;product=cytochrome b561;protein_id=WJG98249.1;transl_table=11 CP118122.1 Genbank gene 1550157 1550819 . - . ID=gene-PUW34_07560;Name=PUW34_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07560 CP118122.1 Protein Homology CDS 1550157 1550819 . - 0 ID=cds-WJG98250.1;Parent=gene-PUW34_07560;Dbxref=NCBI_GP:WJG98250.1;Name=WJG98250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=PUW34_07560;product=class I SAM-dependent methyltransferase;protein_id=WJG98250.1;transl_table=11 CP118122.1 Genbank gene 1551283 1552833 . - . ID=gene-PUW34_07565;Name=PUW34_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07565 CP118122.1 Protein Homology CDS 1551283 1552833 . - 0 ID=cds-WJG98251.1;Parent=gene-PUW34_07565;Dbxref=NCBI_GP:WJG98251.1;Name=WJG98251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=PUW34_07565;product=glycosyltransferase family 39 protein;protein_id=WJG98251.1;transl_table=11 CP118122.1 Genbank gene 1552970 1553650 . - . ID=gene-PUW34_07570;Name=PUW34_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07570 CP118122.1 Protein Homology CDS 1552970 1553650 . - 0 ID=cds-WJG98252.1;Parent=gene-PUW34_07570;Dbxref=NCBI_GP:WJG98252.1;Name=WJG98252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=PUW34_07570;product=amino acid ABC transporter permease;protein_id=WJG98252.1;transl_table=11 CP118122.1 Genbank gene 1553663 1554379 . - . ID=gene-PUW34_07575;Name=PUW34_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07575 CP118122.1 Protein Homology CDS 1553663 1554379 . - 0 ID=cds-WJG98253.1;Parent=gene-PUW34_07575;Dbxref=NCBI_GP:WJG98253.1;Name=WJG98253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196339.1;locus_tag=PUW34_07575;product=amino acid ABC transporter ATP-binding protein;protein_id=WJG98253.1;transl_table=11 CP118122.1 Genbank gene 1554404 1555051 . - . ID=gene-PUW34_07580;Name=PUW34_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07580 CP118122.1 Protein Homology CDS 1554404 1555051 . - 0 ID=cds-WJG98254.1;Parent=gene-PUW34_07580;Dbxref=NCBI_GP:WJG98254.1;Name=WJG98254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=PUW34_07580;product=amino acid ABC transporter permease;protein_id=WJG98254.1;transl_table=11 CP118122.1 Genbank gene 1555058 1555819 . - . ID=gene-PUW34_07585;Name=PUW34_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07585 CP118122.1 Protein Homology CDS 1555058 1555819 . - 0 ID=cds-WJG98255.1;Parent=gene-PUW34_07585;Dbxref=NCBI_GP:WJG98255.1;Name=WJG98255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=PUW34_07585;product=transporter substrate-binding domain-containing protein;protein_id=WJG98255.1;transl_table=11 CP118122.1 Genbank gene 1556727 1557071 . + . ID=gene-PUW34_07590;Name=PUW34_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07590 CP118122.1 Protein Homology CDS 1556727 1557071 . + 0 ID=cds-WJG98256.1;Parent=gene-PUW34_07590;Dbxref=NCBI_GP:WJG98256.1;Name=WJG98256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=PUW34_07590;product=DUF1294 domain-containing protein;protein_id=WJG98256.1;transl_table=11 CP118122.1 Genbank gene 1557192 1558418 . - . ID=gene-PUW34_07595;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=PUW34_07595 CP118122.1 Protein Homology CDS 1557192 1558418 . - 0 ID=cds-WJG98257.1;Parent=gene-PUW34_07595;Dbxref=NCBI_GP:WJG98257.1;Name=WJG98257.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=PUW34_07595;product=SPI-2 type III secretion system effector SseJ;protein_id=WJG98257.1;transl_table=11 CP118122.1 Genbank gene 1558844 1559560 . + . ID=gene-PUW34_07600;Name=PUW34_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07600 CP118122.1 Protein Homology CDS 1558844 1559560 . + 0 ID=cds-WJG98258.1;Parent=gene-PUW34_07600;Dbxref=NCBI_GP:WJG98258.1;Name=WJG98258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=PUW34_07600;product=hypothetical protein;protein_id=WJG98258.1;transl_table=11 CP118122.1 Genbank gene 1559689 1560090 . - . ID=gene-PUW34_07605;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=PUW34_07605 CP118122.1 Protein Homology CDS 1559689 1560090 . - 0 ID=cds-WJG98259.1;Parent=gene-PUW34_07605;Dbxref=NCBI_GP:WJG98259.1;Name=WJG98259.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=PUW34_07605;product=type III secretion system effector SteB;protein_id=WJG98259.1;transl_table=11 CP118122.1 Genbank gene 1560613 1560888 . + . ID=gene-PUW34_07610;Name=PUW34_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07610 CP118122.1 Protein Homology CDS 1560613 1560888 . + 0 ID=cds-WJG98260.1;Parent=gene-PUW34_07610;Dbxref=NCBI_GP:WJG98260.1;Name=WJG98260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=PUW34_07610;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WJG98260.1;transl_table=11 CP118122.1 Genbank gene 1560920 1562038 . + . ID=gene-PUW34_07615;Name=PUW34_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07615 CP118122.1 Protein Homology CDS 1560920 1562038 . + 0 ID=cds-WJG98261.1;Parent=gene-PUW34_07615;Dbxref=NCBI_GP:WJG98261.1;Name=WJG98261.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=PUW34_07615;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WJG98261.1;transl_table=11 CP118122.1 Genbank gene 1562207 1563832 . + . ID=gene-PUW34_07620;Name=PUW34_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07620 CP118122.1 Protein Homology CDS 1562207 1563832 . + 0 ID=cds-WJG98262.1;Parent=gene-PUW34_07620;Dbxref=NCBI_GP:WJG98262.1;Name=WJG98262.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=PUW34_07620;product=methyl-accepting chemotaxis protein;protein_id=WJG98262.1;transl_table=11 CP118122.1 Genbank gene 1563893 1564816 . - . ID=gene-PUW34_07625;Name=PUW34_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07625 CP118122.1 Protein Homology CDS 1563893 1564816 . - 0 ID=cds-WJG98263.1;Parent=gene-PUW34_07625;Dbxref=NCBI_GP:WJG98263.1;Name=WJG98263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=PUW34_07625;product=LysR substrate-binding domain-containing protein;protein_id=WJG98263.1;transl_table=11 CP118122.1 Genbank gene 1565109 1566452 . + . ID=gene-PUW34_07630;Name=PUW34_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07630 CP118122.1 Protein Homology CDS 1565109 1566452 . + 0 ID=cds-WJG98264.1;Parent=gene-PUW34_07630;Dbxref=NCBI_GP:WJG98264.1;Name=WJG98264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=PUW34_07630;product=VOC family protein;protein_id=WJG98264.1;transl_table=11 CP118122.1 Genbank gene 1566501 1568009 . + . ID=gene-PUW34_07635;Name=PUW34_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07635 CP118122.1 Protein Homology CDS 1566501 1568009 . + 0 ID=cds-WJG98265.1;Parent=gene-PUW34_07635;Dbxref=NCBI_GP:WJG98265.1;Name=WJG98265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=PUW34_07635;product=carboxylesterase/lipase family protein;protein_id=WJG98265.1;transl_table=11 CP118122.1 Genbank gene 1568229 1569884 . + . ID=gene-PUW34_07640;Name=PUW34_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07640 CP118122.1 Protein Homology CDS 1568229 1569884 . + 0 ID=cds-WJG98266.1;Parent=gene-PUW34_07640;Dbxref=NCBI_GP:WJG98266.1;Name=WJG98266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=PUW34_07640;product=glucan biosynthesis protein;protein_id=WJG98266.1;transl_table=11 CP118122.1 Genbank gene 1570080 1570655 . + . ID=gene-PUW34_07645;Name=PUW34_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07645 CP118122.1 Protein Homology CDS 1570080 1570655 . + 0 ID=cds-WJG98267.1;Parent=gene-PUW34_07645;Dbxref=NCBI_GP:WJG98267.1;Name=WJG98267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=PUW34_07645;product=YceI family protein;protein_id=WJG98267.1;transl_table=11 CP118122.1 Genbank gene 1570833 1571552 . - . ID=gene-PUW34_07650;Name=PUW34_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07650 CP118122.1 Protein Homology CDS 1570833 1571552 . - 0 ID=cds-WJG98268.1;Parent=gene-PUW34_07650;Dbxref=NCBI_GP:WJG98268.1;Name=WJG98268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=PUW34_07650;product=FadR/GntR family transcriptional regulator;protein_id=WJG98268.1;transl_table=11 CP118122.1 Genbank gene 1571641 1572732 . - . ID=gene-PUW34_07655;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=PUW34_07655 CP118122.1 Protein Homology CDS 1571641 1572732 . - 0 ID=cds-WJG98948.1;Parent=gene-PUW34_07655;Dbxref=NCBI_GP:WJG98948.1;Name=WJG98948.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=PUW34_07655;product=L-idonate 5-dehydrogenase;protein_id=WJG98948.1;transl_table=11 CP118122.1 Genbank gene 1572701 1574062 . - . ID=gene-PUW34_07660;Name=PUW34_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07660 CP118122.1 Protein Homology CDS 1572701 1574062 . - 0 ID=cds-WJG98949.1;Parent=gene-PUW34_07660;Dbxref=NCBI_GP:WJG98949.1;Name=WJG98949.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=PUW34_07660;product=MFS transporter;protein_id=WJG98949.1;transl_table=11 CP118122.1 Genbank gene 1574146 1574913 . - . ID=gene-PUW34_07665;Name=PUW34_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07665 CP118122.1 Protein Homology CDS 1574146 1574913 . - 0 ID=cds-WJG98269.1;Parent=gene-PUW34_07665;Dbxref=NCBI_GP:WJG98269.1;Name=WJG98269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=PUW34_07665;product=SDR family oxidoreductase;protein_id=WJG98269.1;transl_table=11 CP118122.1 Genbank gene 1575250 1576503 . + . ID=gene-PUW34_07670;Name=PUW34_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07670 CP118122.1 Protein Homology CDS 1575250 1576503 . + 0 ID=cds-WJG98270.1;Parent=gene-PUW34_07670;Dbxref=NCBI_GP:WJG98270.1;Name=WJG98270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=PUW34_07670;product=enolase C-terminal domain-like protein;protein_id=WJG98270.1;transl_table=11 CP118122.1 Genbank gene 1576644 1577081 . - . ID=gene-PUW34_07675;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=PUW34_07675 CP118122.1 Protein Homology CDS 1576644 1577081 . - 0 ID=cds-WJG98271.1;Parent=gene-PUW34_07675;Dbxref=NCBI_GP:WJG98271.1;Name=WJG98271.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=PUW34_07675;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WJG98271.1;transl_table=11 CP118122.1 Genbank gene 1577081 1577872 . - . ID=gene-PUW34_07680;Name=PUW34_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07680 CP118122.1 Protein Homology CDS 1577081 1577872 . - 0 ID=cds-WJG98272.1;Parent=gene-PUW34_07680;Dbxref=NCBI_GP:WJG98272.1;Name=WJG98272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=PUW34_07680;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG98272.1;transl_table=11 CP118122.1 Genbank gene 1577888 1578520 . - . ID=gene-PUW34_07685;Name=PUW34_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07685 CP118122.1 Protein Homology CDS 1577888 1578520 . - 0 ID=cds-WJG98273.1;Parent=gene-PUW34_07685;Dbxref=NCBI_GP:WJG98273.1;Name=WJG98273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=PUW34_07685;product=ribulose-phosphate 3 epimerase family protein;protein_id=WJG98273.1;transl_table=11 CP118122.1 Genbank gene 1578532 1578969 . - . ID=gene-PUW34_07690;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=PUW34_07690 CP118122.1 Protein Homology CDS 1578532 1578969 . - 0 ID=cds-WJG98274.1;Parent=gene-PUW34_07690;Dbxref=NCBI_GP:WJG98274.1;Name=WJG98274.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=PUW34_07690;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WJG98274.1;transl_table=11 CP118122.1 Genbank gene 1579101 1579907 . - . ID=gene-PUW34_07695;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=PUW34_07695 CP118122.1 Protein Homology CDS 1579101 1579907 . - 0 ID=cds-WJG98275.1;Parent=gene-PUW34_07695;Dbxref=NCBI_GP:WJG98275.1;Name=WJG98275.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=PUW34_07695;product=BtpA family protein SgcQ;protein_id=WJG98275.1;transl_table=11 CP118122.1 Genbank gene 1579921 1581234 . - . ID=gene-PUW34_07700;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=PUW34_07700 CP118122.1 Protein Homology CDS 1579921 1581234 . - 0 ID=cds-WJG98276.1;Parent=gene-PUW34_07700;Dbxref=NCBI_GP:WJG98276.1;Name=WJG98276.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=PUW34_07700;product=PTS sugar transporter subunit IIC SgcC;protein_id=WJG98276.1;transl_table=11 CP118122.1 Genbank gene 1581245 1581526 . - . ID=gene-PUW34_07705;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=PUW34_07705 CP118122.1 Protein Homology CDS 1581245 1581526 . - 0 ID=cds-WJG98277.1;Parent=gene-PUW34_07705;Dbxref=NCBI_GP:WJG98277.1;Name=WJG98277.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=PUW34_07705;product=PTS sugar transporter subunit IIB SgcB;protein_id=WJG98277.1;transl_table=11 CP118122.1 Genbank gene 1581523 1582641 . - . ID=gene-PUW34_07710;Name=PUW34_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07710 CP118122.1 Protein Homology CDS 1581523 1582641 . - 0 ID=cds-WJG98278.1;Parent=gene-PUW34_07710;Dbxref=NCBI_GP:WJG98278.1;Name=WJG98278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=PUW34_07710;product=M42 family metallopeptidase;protein_id=WJG98278.1;transl_table=11 CP118122.1 Genbank gene 1582858 1583397 . + . ID=gene-PUW34_07715;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=PUW34_07715 CP118122.1 Protein Homology CDS 1582858 1583397 . + 0 ID=cds-WJG98279.1;Parent=gene-PUW34_07715;Dbxref=NCBI_GP:WJG98279.1;Name=WJG98279.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=PUW34_07715;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WJG98279.1;transl_table=11 CP118122.1 Genbank gene 1583394 1584374 . - . ID=gene-PUW34_07720;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=PUW34_07720 CP118122.1 Protein Homology CDS 1583394 1584374 . - 0 ID=cds-WJG98280.1;Parent=gene-PUW34_07720;Dbxref=NCBI_GP:WJG98280.1;Name=WJG98280.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=PUW34_07720;product=YdcK family protein;protein_id=WJG98280.1;transl_table=11 CP118122.1 Genbank gene 1584481 1585494 . + . ID=gene-PUW34_07725;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=PUW34_07725 CP118122.1 Protein Homology CDS 1584481 1585494 . + 0 ID=cds-WJG98281.1;Parent=gene-PUW34_07725;Dbxref=NCBI_GP:WJG98281.1;Name=WJG98281.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=PUW34_07725;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WJG98281.1;transl_table=11 CP118122.1 Genbank gene 1585481 1586077 . + . ID=gene-PUW34_07730;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=PUW34_07730 CP118122.1 Protein Homology CDS 1585481 1586077 . + 0 ID=cds-WJG98282.1;Parent=gene-PUW34_07730;Dbxref=NCBI_GP:WJG98282.1;Name=WJG98282.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=PUW34_07730;product=tellurite resistance methyltransferase TehB;protein_id=WJG98282.1;transl_table=11 CP118122.1 Genbank gene 1586233 1586901 . + . ID=gene-PUW34_07735;Name=PUW34_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07735 CP118122.1 Protein Homology CDS 1586233 1586901 . + 0 ID=cds-WJG98283.1;Parent=gene-PUW34_07735;Dbxref=NCBI_GP:WJG98283.1;Name=WJG98283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=PUW34_07735;product=DUF3313 domain-containing protein;protein_id=WJG98283.1;transl_table=11 CP118122.1 Genbank gene 1586955 1588133 . - . ID=gene-PUW34_07740;Name=PUW34_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07740 CP118122.1 Protein Homology CDS 1586955 1588133 . - 0 ID=cds-WJG98284.1;Parent=gene-PUW34_07740;Dbxref=NCBI_GP:WJG98284.1;Name=WJG98284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=PUW34_07740;product=benzoate/H(+) symporter BenE family transporter;protein_id=WJG98284.1;transl_table=11 CP118122.1 Genbank gene 1588225 1588761 . + . ID=gene-PUW34_07745;Name=PUW34_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07745 CP118122.1 Protein Homology CDS 1588225 1588761 . + 0 ID=cds-WJG98285.1;Parent=gene-PUW34_07745;Dbxref=NCBI_GP:WJG98285.1;Name=WJG98285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369539.1;locus_tag=PUW34_07745;product=XRE family transcriptional regulator;protein_id=WJG98285.1;transl_table=11 CP118122.1 Genbank gene 1588840 1590804 . + . ID=gene-PUW34_07750;Name=PUW34_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07750 CP118122.1 Protein Homology CDS 1588840 1590804 . + 0 ID=cds-WJG98286.1;Parent=gene-PUW34_07750;Dbxref=NCBI_GP:WJG98286.1;Name=WJG98286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=PUW34_07750;product=U32 family peptidase;protein_id=WJG98286.1;transl_table=11 CP118122.1 Genbank gene 1590805 1591035 . - . ID=gene-PUW34_07755;Name=PUW34_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07755 CP118122.1 Protein Homology CDS 1590805 1591035 . - 0 ID=cds-WJG98950.1;Parent=gene-PUW34_07755;Dbxref=NCBI_GP:WJG98950.1;Name=WJG98950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=PUW34_07755;product=DUF2554 family protein;protein_id=WJG98950.1;transl_table=11 CP118122.1 Genbank pseudogene 1591309 1592257 . - . ID=gene-PUW34_07760;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=pseudogene;locus_tag=PUW34_07760;pseudo=true CP118122.1 Protein Homology CDS 1591309 1592257 . - 0 ID=cds-PUW34_07760;Parent=gene-PUW34_07760;Note=frameshifted;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=PUW34_07760;product=SPI-2 type III secretion system effector SifB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1592794 1593192 . + . ID=gene-PUW34_07765;Name=PUW34_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07765 CP118122.1 Protein Homology CDS 1592794 1593192 . + 0 ID=cds-WJG98287.1;Parent=gene-PUW34_07765;Dbxref=NCBI_GP:WJG98287.1;Name=WJG98287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=PUW34_07765;product=D-alanyl-D-alanine dipeptidase;protein_id=WJG98287.1;transl_table=11 CP118122.1 Genbank gene 1593225 1593455 . + . ID=gene-PUW34_07770;Name=PUW34_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07770 CP118122.1 Protein Homology CDS 1593225 1593455 . + 0 ID=cds-WJG98288.1;Parent=gene-PUW34_07770;Dbxref=NCBI_GP:WJG98288.1;Name=WJG98288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=PUW34_07770;product=hypothetical protein;protein_id=WJG98288.1;transl_table=11 CP118122.1 Genbank gene 1593714 1594484 . + . ID=gene-PUW34_07775;Name=PUW34_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07775 CP118122.1 Protein Homology CDS 1593714 1594484 . + 0 ID=cds-WJG98289.1;Parent=gene-PUW34_07775;Dbxref=NCBI_GP:WJG98289.1;Name=WJG98289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=PUW34_07775;product=M15 family metallopeptidase;protein_id=WJG98289.1;transl_table=11 CP118122.1 Genbank gene 1594620 1596044 . + . ID=gene-PUW34_07780;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=PUW34_07780 CP118122.1 Protein Homology CDS 1594620 1596044 . + 0 ID=cds-WJG98290.1;Parent=gene-PUW34_07780;Dbxref=NCBI_GP:WJG98290.1;Name=WJG98290.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=PUW34_07780;product=GntR family transcriptional regulator YdcR;protein_id=WJG98290.1;transl_table=11 CP118122.1 Genbank gene 1596159 1597604 . + . ID=gene-PUW34_07785;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=PUW34_07785 CP118122.1 Protein Homology CDS 1596159 1597604 . + 0 ID=cds-WJG98291.1;Parent=gene-PUW34_07785;Dbxref=NCBI_GP:WJG98291.1;Name=WJG98291.1;Ontology_term=GO:0009447,GO:0019145;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase activity|0019145||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=PUW34_07785;product=aminobutyraldehyde dehydrogenase;protein_id=WJG98291.1;transl_table=11 CP118122.1 Genbank gene 1597709 1597804 . - . ID=gene-PUW34_07790;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=PUW34_07790 CP118122.1 Protein Homology CDS 1597709 1597804 . - 0 ID=cds-WJG98292.1;Parent=gene-PUW34_07790;Dbxref=NCBI_GP:WJG98292.1;Name=WJG98292.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=PUW34_07790;product=stress response membrane protein YncL;protein_id=WJG98292.1;transl_table=11 CP118122.1 Genbank gene 1598003 1598176 . + . ID=gene-PUW34_07795;Name=PUW34_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07795 CP118122.1 Protein Homology CDS 1598003 1598176 . + 0 ID=cds-WJG98951.1;Parent=gene-PUW34_07795;Dbxref=NCBI_GP:WJG98951.1;Name=WJG98951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=PUW34_07795;product=GhoT/OrtT family toxin;protein_id=WJG98951.1;transl_table=11 CP118122.1 Genbank gene 1598221 1600365 . - . ID=gene-PUW34_07800;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=PUW34_07800 CP118122.1 Protein Homology CDS 1598221 1600365 . - 0 ID=cds-WJG98293.1;Parent=gene-PUW34_07800;Dbxref=NCBI_GP:WJG98293.1;Name=WJG98293.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=PUW34_07800;product=virulence-associated effector SrfC;protein_id=WJG98293.1;transl_table=11 CP118122.1 Genbank pseudogene 1600362 1602158 . - . ID=gene-PUW34_07805;Name=PUW34_07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07805;pseudo=true CP118122.1 Protein Homology CDS 1600362 1602158 . - 0 ID=cds-PUW34_07805;Parent=gene-PUW34_07805;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW34_07805;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1602160 1603038 . + . ID=gene-PUW34_07810;Name=PUW34_07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07810;pseudo=true CP118122.1 Protein Homology CDS 1602160 1603038 . + 0 ID=cds-PUW34_07810;Parent=gene-PUW34_07810;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW34_07810;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1603031 1603384 . - . ID=gene-PUW34_07815;Name=PUW34_07815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07815;pseudo=true CP118122.1 Protein Homology CDS 1603031 1603384 . - 0 ID=cds-PUW34_07815;Parent=gene-PUW34_07815;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW34_07815;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1603389 1604714 . - . ID=gene-PUW34_07820;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=PUW34_07820 CP118122.1 Protein Homology CDS 1603389 1604714 . - 0 ID=cds-WJG98294.1;Parent=gene-PUW34_07820;Dbxref=NCBI_GP:WJG98294.1;Name=WJG98294.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=PUW34_07820;product=virulence-associated effector SrfA;protein_id=WJG98294.1;transl_table=11 CP118122.1 Genbank gene 1604938 1605171 . + . ID=gene-PUW34_07825;Name=PUW34_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07825 CP118122.1 Protein Homology CDS 1604938 1605171 . + 0 ID=cds-WJG98295.1;Parent=gene-PUW34_07825;Dbxref=NCBI_GP:WJG98295.1;Name=WJG98295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=PUW34_07825;product=YdcY family protein;protein_id=WJG98295.1;transl_table=11 CP118122.1 Genbank gene 1605176 1605625 . - . ID=gene-PUW34_07830;Name=PUW34_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07830 CP118122.1 Protein Homology CDS 1605176 1605625 . - 0 ID=cds-WJG98296.1;Parent=gene-PUW34_07830;Dbxref=NCBI_GP:WJG98296.1;Name=WJG98296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=PUW34_07830;product=DMT family transporter;protein_id=WJG98296.1;transl_table=11 CP118122.1 Genbank gene 1605625 1606140 . - . ID=gene-PUW34_07835;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=PUW34_07835 CP118122.1 Protein Homology CDS 1605625 1606140 . - 0 ID=cds-WJG98297.1;Parent=gene-PUW34_07835;Dbxref=NCBI_GP:WJG98297.1;Name=WJG98297.1;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=PUW34_07835;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WJG98297.1;transl_table=11 CP118122.1 Genbank pseudogene 1606352 1607388 . + . ID=gene-PUW34_07840;Name=PUW34_07840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07840;pseudo=true CP118122.1 Protein Homology CDS 1606352 1607388 . + 0 ID=cds-PUW34_07840;Parent=gene-PUW34_07840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=PUW34_07840;product=NADP-dependent oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1607722 1608387 . + . ID=gene-PUW34_07845;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=PUW34_07845 CP118122.1 Protein Homology CDS 1607722 1608387 . + 0 ID=cds-WJG98298.1;Parent=gene-PUW34_07845;Dbxref=NCBI_GP:WJG98298.1;Name=WJG98298.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=PUW34_07845;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WJG98298.1;transl_table=11 CP118122.1 Genbank pseudogene 1608443 1610562 . - . ID=gene-PUW34_07850;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=pseudogene;locus_tag=PUW34_07850;pseudo=true CP118122.1 Protein Homology CDS 1608443 1610562 . - 0 ID=cds-PUW34_07850;Parent=gene-PUW34_07850;Note=frameshifted;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=PUW34_07850;product=TonB-dependent receptor PqqU;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1610826 1611891 . + . ID=gene-PUW34_07855;Name=PUW34_07855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07855;pseudo=true CP118122.1 Protein Homology CDS 1610826 1611891 . + 0 ID=cds-PUW34_07855;Parent=gene-PUW34_07855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=PUW34_07855;product=YncE family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1611845 1611997 . + . ID=gene-PUW34_07860;Name=PUW34_07860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_07860;pseudo=true CP118122.1 Protein Homology CDS 1611845 1611997 . + 0 ID=cds-PUW34_07860;Parent=gene-PUW34_07860;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=PUW34_07860;product=YgdI/YgdR family lipoprotein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1612074 1613567 . - . ID=gene-PUW34_07865;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=PUW34_07865 CP118122.1 Protein Homology CDS 1612074 1613567 . - 0 ID=cds-WJG98299.1;Parent=gene-PUW34_07865;Dbxref=NCBI_GP:WJG98299.1;Name=WJG98299.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=PUW34_07865;product=L-asparagine permease;protein_id=WJG98299.1;transl_table=11 CP118122.1 Genbank gene 1614080 1614712 . + . ID=gene-PUW34_07870;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=PUW34_07870 CP118122.1 Protein Homology CDS 1614080 1614712 . + 0 ID=cds-WJG98300.1;Parent=gene-PUW34_07870;Dbxref=NCBI_GP:WJG98300.1;Name=WJG98300.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=PUW34_07870;product=type III secretion system effector SteA;protein_id=WJG98300.1;transl_table=11 CP118122.1 Genbank gene 1614996 1615841 . + . ID=gene-PUW34_07875;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=PUW34_07875 CP118122.1 Protein Homology CDS 1614996 1615841 . + 0 ID=cds-WJG98301.1;Parent=gene-PUW34_07875;Dbxref=NCBI_GP:WJG98301.1;Name=WJG98301.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=PUW34_07875;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WJG98301.1;transl_table=11 CP118122.1 Genbank gene 1615877 1616770 . - . ID=gene-PUW34_07880;Name=PUW34_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07880 CP118122.1 Protein Homology CDS 1615877 1616770 . - 0 ID=cds-WJG98302.1;Parent=gene-PUW34_07880;Dbxref=NCBI_GP:WJG98302.1;Name=WJG98302.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=PUW34_07880;product=PhzF family isomerase;protein_id=WJG98302.1;transl_table=11 CP118122.1 Genbank gene 1616876 1617556 . - . ID=gene-PUW34_07885;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PUW34_07885 CP118122.1 Protein Homology CDS 1616876 1617556 . - 0 ID=cds-WJG98303.1;Parent=gene-PUW34_07885;Dbxref=NCBI_GP:WJG98303.1;Name=WJG98303.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=PUW34_07885;product=respiratory nitrate reductase subunit gamma;protein_id=WJG98303.1;transl_table=11 CP118122.1 Genbank gene 1617553 1618248 . - . ID=gene-PUW34_07890;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=PUW34_07890 CP118122.1 Protein Homology CDS 1617553 1618248 . - 0 ID=cds-WJG98304.1;Parent=gene-PUW34_07890;Dbxref=NCBI_GP:WJG98304.1;Name=WJG98304.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=PUW34_07890;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WJG98304.1;transl_table=11 CP118122.1 Genbank gene 1618248 1619792 . - . ID=gene-PUW34_07895;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PUW34_07895 CP118122.1 Protein Homology CDS 1618248 1619792 . - 0 ID=cds-WJG98305.1;Parent=gene-PUW34_07895;Dbxref=NCBI_GP:WJG98305.1;Name=WJG98305.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=PUW34_07895;product=nitrate reductase subunit beta;protein_id=WJG98305.1;transl_table=11 CP118122.1 Genbank gene 1619789 1623529 . - . ID=gene-PUW34_07900;Name=PUW34_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07900 CP118122.1 Protein Homology CDS 1619789 1623529 . - 0 ID=cds-WJG98306.1;Parent=gene-PUW34_07900;Dbxref=NCBI_GP:WJG98306.1;Name=WJG98306.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=PUW34_07900;product=nitrate reductase subunit alpha;protein_id=WJG98306.1;transl_table=11 CP118122.1 Genbank gene 1623621 1625009 . - . ID=gene-PUW34_07905;Name=PUW34_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07905 CP118122.1 Protein Homology CDS 1623621 1625009 . - 0 ID=cds-WJG98307.1;Parent=gene-PUW34_07905;Dbxref=NCBI_GP:WJG98307.1;Name=WJG98307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=PUW34_07905;product=NarK family nitrate/nitrite MFS transporter;protein_id=WJG98307.1;transl_table=11 CP118122.1 Genbank gene 1625224 1625802 . - . ID=gene-PUW34_07910;Name=PUW34_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07910 CP118122.1 Protein Homology CDS 1625224 1625802 . - 0 ID=cds-WJG98308.1;Parent=gene-PUW34_07910;Dbxref=NCBI_GP:WJG98308.1;Name=WJG98308.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=PUW34_07910;product=TetR family transcriptional regulator;protein_id=WJG98308.1;transl_table=11 CP118122.1 Genbank gene 1625920 1627407 . + . ID=gene-PUW34_07915;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=PUW34_07915 CP118122.1 Protein Homology CDS 1625920 1627407 . + 0 ID=cds-WJG98309.1;Parent=gene-PUW34_07915;Dbxref=NCBI_GP:WJG98309.1;Name=WJG98309.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=PUW34_07915;product=methyl viologen efflux MFS transporter SmvA;protein_id=WJG98309.1;transl_table=11 CP118122.1 Genbank gene 1627432 1627812 . - . ID=gene-PUW34_07920;Name=PUW34_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07920 CP118122.1 Protein Homology CDS 1627432 1627812 . - 0 ID=cds-WJG98952.1;Parent=gene-PUW34_07920;Dbxref=NCBI_GP:WJG98952.1;Name=WJG98952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=PUW34_07920;product=GFA family protein;protein_id=WJG98952.1;transl_table=11 CP118122.1 Genbank gene 1627956 1629044 . - . ID=gene-PUW34_07925;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=PUW34_07925 CP118122.1 Protein Homology CDS 1627956 1629044 . - 0 ID=cds-WJG98310.1;Parent=gene-PUW34_07925;Dbxref=NCBI_GP:WJG98310.1;Name=WJG98310.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=PUW34_07925;product=porin OmpD;protein_id=WJG98310.1;transl_table=11 CP118122.1 Genbank gene 1629568 1630449 . - . ID=gene-PUW34_07930;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=PUW34_07930 CP118122.1 Protein Homology CDS 1629568 1630449 . - 0 ID=cds-WJG98311.1;Parent=gene-PUW34_07930;Dbxref=NCBI_GP:WJG98311.1;Name=WJG98311.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=PUW34_07930;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WJG98311.1;transl_table=11 CP118122.1 Genbank gene 1630727 1633774 . + . ID=gene-PUW34_07935;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PUW34_07935 CP118122.1 Protein Homology CDS 1630727 1633774 . + 0 ID=cds-WJG98312.1;Parent=gene-PUW34_07935;Dbxref=NCBI_GP:WJG98312.1;Name=WJG98312.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=PUW34_07935;product=formate dehydrogenase-N subunit alpha;protein_id=WJG98312.1;transl_except=(pos:1631312..1631314%2Caa:Sec);transl_table=11 CP118122.1 Genbank gene 1633788 1634672 . + . ID=gene-PUW34_07940;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PUW34_07940 CP118122.1 Protein Homology CDS 1633788 1634672 . + 0 ID=cds-WJG98313.1;Parent=gene-PUW34_07940;Dbxref=NCBI_GP:WJG98313.1;Name=WJG98313.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=PUW34_07940;product=formate dehydrogenase subunit beta;protein_id=WJG98313.1;transl_table=11 CP118122.1 Genbank gene 1634665 1635321 . + . ID=gene-PUW34_07945;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=PUW34_07945 CP118122.1 Protein Homology CDS 1634665 1635321 . + 0 ID=cds-WJG98314.1;Parent=gene-PUW34_07945;Dbxref=NCBI_GP:WJG98314.1;Name=WJG98314.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=PUW34_07945;product=formate dehydrogenase-N subunit gamma;protein_id=WJG98314.1;transl_table=11 CP118122.1 Genbank gene 1635412 1636413 . - . ID=gene-PUW34_07950;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=PUW34_07950 CP118122.1 Protein Homology CDS 1635412 1636413 . - 0 ID=cds-WJG98315.1;Parent=gene-PUW34_07950;Dbxref=NCBI_GP:WJG98315.1;Name=WJG98315.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=PUW34_07950;product=alcohol dehydrogenase AdhP;protein_id=WJG98315.1;transl_table=11 CP118122.1 Genbank gene 1636695 1638392 . - . ID=gene-PUW34_07955;Name=PUW34_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07955 CP118122.1 Protein Homology CDS 1636695 1638392 . - 0 ID=cds-WJG98316.1;Parent=gene-PUW34_07955;Dbxref=NCBI_GP:WJG98316.1;Name=WJG98316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=PUW34_07955;product=NAD-dependent malic enzyme;protein_id=WJG98316.1;transl_table=11 CP118122.1 Genbank gene 1638569 1638712 . - . ID=gene-PUW34_07960;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=PUW34_07960 CP118122.1 Protein Homology CDS 1638569 1638712 . - 0 ID=cds-WJG98317.1;Parent=gene-PUW34_07960;Dbxref=NCBI_GP:WJG98317.1;Name=WJG98317.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=PUW34_07960;product=stationary-phase-induced ribosome-associated protein;protein_id=WJG98317.1;transl_table=11 CP118122.1 Genbank gene 1638807 1639022 . - . ID=gene-PUW34_07965;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=PUW34_07965 CP118122.1 Protein Homology CDS 1638807 1639022 . - 0 ID=cds-WJG98318.1;Parent=gene-PUW34_07965;Dbxref=NCBI_GP:WJG98318.1;Name=WJG98318.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=PUW34_07965;product=biofilm-dependent modulation protein;protein_id=WJG98318.1;transl_table=11 CP118122.1 Genbank gene 1639535 1639966 . + . ID=gene-PUW34_07970;Name=PUW34_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07970 CP118122.1 Protein Homology CDS 1639535 1639966 . + 0 ID=cds-WJG98319.1;Parent=gene-PUW34_07970;Dbxref=NCBI_GP:WJG98319.1;Name=WJG98319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=PUW34_07970;product=OsmC family protein;protein_id=WJG98319.1;transl_table=11 CP118122.1 Genbank gene 1640316 1640645 . + . ID=gene-PUW34_07975;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=PUW34_07975 CP118122.1 Protein Homology CDS 1640316 1640645 . + 0 ID=cds-WJG98320.1;Parent=gene-PUW34_07975;Dbxref=NCBI_GP:WJG98320.1;Name=WJG98320.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=PUW34_07975;product=acid-activated periplasmic chaperone HdeB;protein_id=WJG98320.1;transl_table=11 CP118122.1 Genbank gene 1640788 1641573 . + . ID=gene-PUW34_07980;Name=PUW34_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_07980 CP118122.1 Protein Homology CDS 1640788 1641573 . + 0 ID=cds-WJG98321.1;Parent=gene-PUW34_07980;Dbxref=NCBI_GP:WJG98321.1;Name=WJG98321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=PUW34_07980;product=OBAP family protein;protein_id=WJG98321.1;transl_table=11 CP118122.1 Genbank gene 1641797 1643485 . + . ID=gene-PUW34_07985;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=PUW34_07985 CP118122.1 Protein Homology CDS 1641797 1643485 . + 0 ID=cds-WJG98322.1;Parent=gene-PUW34_07985;Dbxref=NCBI_GP:WJG98322.1;Name=WJG98322.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944943.1;locus_tag=PUW34_07985;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WJG98322.1;transl_table=11 CP118122.1 Genbank pseudogene 1643482 1646010 . + . ID=gene-PUW34_07990;Name=treY;gbkey=Gene;gene=treY;gene_biotype=pseudogene;locus_tag=PUW34_07990;pseudo=true CP118122.1 Protein Homology CDS 1643482 1646010 . + 0 ID=cds-PUW34_07990;Parent=gene-PUW34_07990;Note=frameshifted;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=PUW34_07990;product=malto-oligosyltrehalose synthase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1646067 1648142 . + . ID=gene-PUW34_07995;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PUW34_07995 CP118122.1 Protein Homology CDS 1646067 1648142 . + 0 ID=cds-WJG98323.1;Parent=gene-PUW34_07995;Dbxref=NCBI_GP:WJG98323.1;Name=WJG98323.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=PUW34_07995;product=glycogen debranching protein GlgX;protein_id=WJG98323.1;transl_table=11 CP118122.1 Genbank gene 1648255 1649457 . - . ID=gene-PUW34_08000;Name=PUW34_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08000 CP118122.1 Protein Homology CDS 1648255 1649457 . - 0 ID=cds-WJG98324.1;Parent=gene-PUW34_08000;Dbxref=NCBI_GP:WJG98324.1;Name=WJG98324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=PUW34_08000;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WJG98324.1;transl_table=11 CP118122.1 Genbank pseudogene 1649470 1649760 . - . ID=gene-PUW34_08005;Name=PUW34_08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08005;pseudo=true CP118122.1 Protein Homology CDS 1649470 1649760 . - 0 ID=cds-PUW34_08005;Parent=gene-PUW34_08005;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=PUW34_08005;product=Na+/H+ antiporter NhaC family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1649760 1650338 . - . ID=gene-PUW34_08010;Name=PUW34_08010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08010;pseudo=true CP118122.1 Protein Homology CDS 1649760 1650338 . - 0 ID=cds-PUW34_08010;Parent=gene-PUW34_08010;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=PUW34_08010;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1650568 1650849 . + . ID=gene-PUW34_08015;Name=PUW34_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08015 CP118122.1 Protein Homology CDS 1650568 1650849 . + 0 ID=cds-WJG98325.1;Parent=gene-PUW34_08015;Dbxref=NCBI_GP:WJG98325.1;Name=WJG98325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742002.1;locus_tag=PUW34_08015;product=hypothetical protein;protein_id=WJG98325.1;transl_table=11 CP118122.1 Genbank pseudogene 1651138 1651305 . - . ID=gene-PUW34_08020;Name=PUW34_08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08020;pseudo=true CP118122.1 Protein Homology CDS 1651138 1651305 . - 0 ID=cds-PUW34_08020;Parent=gene-PUW34_08020;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=PUW34_08020;product=DUF1493 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1651305 1651721 . + . ID=gene-PUW34_08025;Name=PUW34_08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08025;pseudo=true CP118122.1 Protein Homology CDS 1651305 1651721 . + 0 ID=cds-PUW34_08025;Parent=gene-PUW34_08025;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=PUW34_08025;product=PhoPQ-activated protein PqaA family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1651718 1652308 . + . ID=gene-PUW34_08030;Name=PUW34_08030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08030;pseudo=true CP118122.1 Protein Homology CDS 1651718 1652308 . + 0 ID=cds-PUW34_08030;Parent=gene-PUW34_08030;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=PUW34_08030;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1652283 1653308 . + . ID=gene-PUW34_08035;Name=PUW34_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08035 CP118122.1 Protein Homology CDS 1652283 1653308 . + 0 ID=cds-WJG98326.1;Parent=gene-PUW34_08035;Dbxref=NCBI_GP:WJG98326.1;Name=WJG98326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=PUW34_08035;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WJG98326.1;transl_table=11 CP118122.1 Genbank gene 1653367 1654158 . - . ID=gene-PUW34_08040;Name=PUW34_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08040 CP118122.1 Protein Homology CDS 1653367 1654158 . - 0 ID=cds-WJG98327.1;Parent=gene-PUW34_08040;Dbxref=NCBI_GP:WJG98327.1;Name=WJG98327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=PUW34_08040;product=FadR/GntR family transcriptional regulator;protein_id=WJG98327.1;transl_table=11 CP118122.1 Genbank gene 1654204 1655295 . - . ID=gene-PUW34_08045;Name=PUW34_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08045 CP118122.1 Protein Homology CDS 1654204 1655295 . - 0 ID=cds-WJG98328.1;Parent=gene-PUW34_08045;Dbxref=NCBI_GP:WJG98328.1;Name=WJG98328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=PUW34_08045;product=linear amide C-N hydrolase;protein_id=WJG98328.1;transl_table=11 CP118122.1 Genbank gene 1655723 1656826 . + . ID=gene-PUW34_08050;Name=PUW34_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08050 CP118122.1 Protein Homology CDS 1655723 1656826 . + 0 ID=cds-WJG98329.1;Parent=gene-PUW34_08050;Dbxref=NCBI_GP:WJG98329.1;Name=WJG98329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=PUW34_08050;product=hydrogenase small subunit;protein_id=WJG98329.1;transl_table=11 CP118122.1 Genbank gene 1656829 1658631 . + . ID=gene-PUW34_08055;Name=PUW34_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08055 CP118122.1 Protein Homology CDS 1656829 1658631 . + 0 ID=cds-WJG98330.1;Parent=gene-PUW34_08055;Dbxref=NCBI_GP:WJG98330.1;Name=WJG98330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=PUW34_08055;product=nickel-dependent hydrogenase large subunit;protein_id=WJG98330.1;transl_table=11 CP118122.1 Genbank gene 1658582 1659325 . + . ID=gene-PUW34_08060;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=PUW34_08060 CP118122.1 Protein Homology CDS 1658582 1659325 . + 0 ID=cds-WJG98331.1;Parent=gene-PUW34_08060;Dbxref=NCBI_GP:WJG98331.1;Name=WJG98331.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=PUW34_08060;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WJG98331.1;transl_table=11 CP118122.1 Genbank gene 1659331 1659939 . + . ID=gene-PUW34_08065;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=PUW34_08065 CP118122.1 Protein Homology CDS 1659331 1659939 . + 0 ID=cds-WJG98332.1;Parent=gene-PUW34_08065;Dbxref=NCBI_GP:WJG98332.1;Name=WJG98332.1;Ontology_term=GO:0051604,GO:0004190,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=PUW34_08065;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WJG98332.1;transl_table=11 CP118122.1 Genbank gene 1659939 1660238 . + . ID=gene-PUW34_08070;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=PUW34_08070 CP118122.1 Protein Homology CDS 1659939 1660238 . + 0 ID=cds-WJG98333.1;Parent=gene-PUW34_08070;Dbxref=NCBI_GP:WJG98333.1;Name=WJG98333.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=PUW34_08070;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WJG98333.1;transl_table=11 CP118122.1 Genbank gene 1660235 1660645 . + . ID=gene-PUW34_08075;Name=PUW34_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08075 CP118122.1 Protein Homology CDS 1660235 1660645 . + 0 ID=cds-WJG98334.1;Parent=gene-PUW34_08075;Dbxref=NCBI_GP:WJG98334.1;Name=WJG98334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=PUW34_08075;product=hydrogenase;protein_id=WJG98334.1;transl_table=11 CP118122.1 Genbank gene 1660663 1661724 . + . ID=gene-PUW34_08080;Name=PUW34_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08080 CP118122.1 Protein Homology CDS 1660663 1661724 . + 0 ID=cds-WJG98335.1;Parent=gene-PUW34_08080;Dbxref=NCBI_GP:WJG98335.1;Name=WJG98335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=PUW34_08080;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WJG98335.1;transl_table=11 CP118122.1 Genbank gene 1661712 1662599 . + . ID=gene-PUW34_08085;Name=PUW34_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08085 CP118122.1 Protein Homology CDS 1661712 1662599 . + 0 ID=cds-WJG98336.1;Parent=gene-PUW34_08085;Dbxref=NCBI_GP:WJG98336.1;Name=WJG98336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=PUW34_08085;product=ATP/GTP-binding protein;protein_id=WJG98336.1;transl_table=11 CP118122.1 Genbank gene 1662612 1662953 . + . ID=gene-PUW34_08090;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW34_08090 CP118122.1 Protein Homology CDS 1662612 1662953 . + 0 ID=cds-WJG98337.1;Parent=gene-PUW34_08090;Dbxref=NCBI_GP:WJG98337.1;Name=WJG98337.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=PUW34_08090;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJG98337.1;transl_table=11 CP118122.1 Genbank gene 1663094 1664212 . - . ID=gene-PUW34_08095;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=PUW34_08095 CP118122.1 Protein Homology CDS 1663094 1664212 . - 0 ID=cds-WJG98338.1;Parent=gene-PUW34_08095;Dbxref=NCBI_GP:WJG98338.1;Name=WJG98338.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=PUW34_08095;product=porin OmpC;protein_id=WJG98338.1;transl_table=11 CP118122.1 Genbank gene 1664929 1665471 . + . ID=gene-PUW34_08100;Name=PUW34_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08100 CP118122.1 Protein Homology CDS 1664929 1665471 . + 0 ID=cds-WJG98339.1;Parent=gene-PUW34_08100;Dbxref=NCBI_GP:WJG98339.1;Name=WJG98339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=PUW34_08100;product=nuclear transport factor 2 family protein;protein_id=WJG98339.1;transl_table=11 CP118122.1 Genbank pseudogene 1665527 1666442 . - . ID=gene-PUW34_08105;Name=PUW34_08105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08105;pseudo=true CP118122.1 Protein Homology CDS 1665527 1666442 . - 0 ID=cds-PUW34_08105;Parent=gene-PUW34_08105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=PUW34_08105;product=bestrophin family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1666697 1667056 . - . ID=gene-PUW34_08110;Name=PUW34_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08110 CP118122.1 Protein Homology CDS 1666697 1667056 . - 0 ID=cds-WJG98340.1;Parent=gene-PUW34_08110;Dbxref=NCBI_GP:WJG98340.1;Name=WJG98340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=PUW34_08110;product=DUF4186 domain-containing protein;protein_id=WJG98340.1;transl_table=11 CP118122.1 Genbank gene 1667056 1667982 . - . ID=gene-PUW34_08115;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=PUW34_08115 CP118122.1 Protein Homology CDS 1667056 1667982 . - 0 ID=cds-WJG98341.1;Parent=gene-PUW34_08115;Dbxref=NCBI_GP:WJG98341.1;Name=WJG98341.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=PUW34_08115;product=glutaminase B;protein_id=WJG98341.1;transl_table=11 CP118122.1 Genbank gene 1668055 1669443 . - . ID=gene-PUW34_08120;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=PUW34_08120 CP118122.1 Protein Homology CDS 1668055 1669443 . - 0 ID=cds-WJG98342.1;Parent=gene-PUW34_08120;Dbxref=NCBI_GP:WJG98342.1;Name=WJG98342.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=PUW34_08120;product=succinate-semialdehyde dehydrogenase;protein_id=WJG98342.1;transl_table=11 CP118122.1 Genbank gene 1669546 1670418 . + . ID=gene-PUW34_08125;Name=PUW34_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08125 CP118122.1 Protein Homology CDS 1669546 1670418 . + 0 ID=cds-WJG98343.1;Parent=gene-PUW34_08125;Dbxref=NCBI_GP:WJG98343.1;Name=WJG98343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=PUW34_08125;product=LysR substrate-binding domain-containing protein;protein_id=WJG98343.1;transl_table=11 CP118122.1 Genbank gene 1670534 1671724 . + . ID=gene-PUW34_08130;Name=PUW34_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08130 CP118122.1 Protein Homology CDS 1670534 1671724 . + 0 ID=cds-WJG98344.1;Parent=gene-PUW34_08130;Dbxref=NCBI_GP:WJG98344.1;Name=WJG98344.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=PUW34_08130;product=sugar transporter;protein_id=WJG98344.1;transl_table=11 CP118122.1 Genbank gene 1671771 1672436 . - . ID=gene-PUW34_08135;Name=PUW34_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08135 CP118122.1 Protein Homology CDS 1671771 1672436 . - 0 ID=cds-WJG98345.1;Parent=gene-PUW34_08135;Dbxref=NCBI_GP:WJG98345.1;Name=WJG98345.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=PUW34_08135;product=MarC family NAAT transporter;protein_id=WJG98345.1;transl_table=11 CP118122.1 Genbank gene 1672695 1673129 . + . ID=gene-PUW34_08140;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=PUW34_08140 CP118122.1 Protein Homology CDS 1672695 1673129 . + 0 ID=cds-WJG98346.1;Parent=gene-PUW34_08140;Dbxref=NCBI_GP:WJG98346.1;Name=WJG98346.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=PUW34_08140;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WJG98346.1;transl_table=11 CP118122.1 Genbank gene 1673149 1673532 . + . ID=gene-PUW34_08145;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=PUW34_08145 CP118122.1 Protein Homology CDS 1673149 1673532 . + 0 ID=cds-WJG98347.1;Parent=gene-PUW34_08145;Dbxref=NCBI_GP:WJG98347.1;Name=WJG98347.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=PUW34_08145;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WJG98347.1;transl_table=11 CP118122.1 Genbank gene 1673561 1673776 . + . ID=gene-PUW34_08150;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=PUW34_08150 CP118122.1 Protein Homology CDS 1673561 1673776 . + 0 ID=cds-WJG98348.1;Parent=gene-PUW34_08150;Dbxref=NCBI_GP:WJG98348.1;Name=WJG98348.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=PUW34_08150;product=multiple antibiotic resistance protein MarB;protein_id=WJG98348.1;transl_table=11 CP118122.1 Genbank gene 1673895 1674797 . - . ID=gene-PUW34_08155;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=PUW34_08155 CP118122.1 Protein Homology CDS 1673895 1674797 . - 0 ID=cds-WJG98349.1;Parent=gene-PUW34_08155;Dbxref=NCBI_GP:WJG98349.1;Name=WJG98349.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=PUW34_08155;product=O-acetylserine/cysteine exporter;protein_id=WJG98349.1;transl_table=11 CP118122.1 Genbank pseudogene 1675025 1676214 . + . ID=gene-PUW34_08160;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=pseudogene;locus_tag=PUW34_08160;pseudo=true CP118122.1 Protein Homology CDS 1675025 1676214 . + 0 ID=cds-PUW34_08160;Parent=gene-PUW34_08160;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=PUW34_08160;product=efflux MFS transporter YdeE;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1676461 1676556 . + . ID=gene-PUW34_08165;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=PUW34_08165 CP118122.1 Protein Homology CDS 1676461 1676556 . + 0 ID=cds-WJG98350.1;Parent=gene-PUW34_08165;Dbxref=NCBI_GP:WJG98350.1;Name=WJG98350.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=PUW34_08165;product=protein MgtS;protein_id=WJG98350.1;transl_table=11 CP118122.1 Genbank gene 1676904 1677296 . - . ID=gene-PUW34_08170;Name=PUW34_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08170 CP118122.1 Protein Homology CDS 1676904 1677296 . - 0 ID=cds-WJG98351.1;Parent=gene-PUW34_08170;Dbxref=NCBI_GP:WJG98351.1;Name=WJG98351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=PUW34_08170;product=YdeI family stress tolerance OB fold protein;protein_id=WJG98351.1;transl_table=11 CP118122.1 Genbank gene 1677724 1678251 . + . ID=gene-PUW34_08175;Name=PUW34_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08175 CP118122.1 Protein Homology CDS 1677724 1678251 . + 0 ID=cds-WJG98352.1;Parent=gene-PUW34_08175;Dbxref=NCBI_GP:WJG98352.1;Name=WJG98352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=PUW34_08175;product=2-oxo-tetronate isomerase;protein_id=WJG98352.1;transl_table=11 CP118122.1 Genbank gene 1678371 1678553 . - . ID=gene-PUW34_08180;Name=PUW34_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08180 CP118122.1 Protein Homology CDS 1678371 1678553 . - 0 ID=cds-WJG98353.1;Parent=gene-PUW34_08180;Dbxref=NCBI_GP:WJG98353.1;Name=WJG98353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=PUW34_08180;product=general stress protein;protein_id=WJG98353.1;transl_table=11 CP118122.1 Genbank pseudogene 1678897 1680938 . - . ID=gene-PUW34_08185;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=pseudogene;locus_tag=PUW34_08185;pseudo=true CP118122.1 Protein Homology CDS 1678897 1680938 . - 0 ID=cds-PUW34_08185;Parent=gene-PUW34_08185;Note=frameshifted;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=PUW34_08185;product=peptidyl-dipeptidase Dcp;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1681077 1681823 . + . ID=gene-PUW34_08190;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=PUW34_08190 CP118122.1 Protein Homology CDS 1681077 1681823 . + 0 ID=cds-WJG98354.1;Parent=gene-PUW34_08190;Dbxref=NCBI_GP:WJG98354.1;Name=WJG98354.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=PUW34_08190;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WJG98354.1;transl_table=11 CP118122.1 Genbank gene 1681953 1682639 . + . ID=gene-PUW34_08195;Name=PUW34_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08195 CP118122.1 Protein Homology CDS 1681953 1682639 . + 0 ID=cds-WJG98355.1;Parent=gene-PUW34_08195;Dbxref=NCBI_GP:WJG98355.1;Name=WJG98355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=PUW34_08195;product=GntR family transcriptional regulator;protein_id=WJG98355.1;transl_table=11 CP118122.1 Genbank gene 1682821 1683024 . + . ID=gene-PUW34_08200;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=PUW34_08200 CP118122.1 Protein Homology CDS 1682821 1683024 . + 0 ID=cds-WJG98356.1;Parent=gene-PUW34_08200;Dbxref=NCBI_GP:WJG98356.1;Name=WJG98356.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=PUW34_08200;product=putative selenium delivery protein YdfZ;protein_id=WJG98356.1;transl_table=11 CP118122.1 Genbank gene 1683091 1684020 . - . ID=gene-PUW34_08205;Name=PUW34_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08205 CP118122.1 Protein Homology CDS 1683091 1684020 . - 0 ID=cds-WJG98953.1;Parent=gene-PUW34_08205;Dbxref=NCBI_GP:WJG98953.1;Name=WJG98953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019736.2;locus_tag=PUW34_08205;product=mannitol dehydrogenase family protein;protein_id=WJG98953.1;transl_table=11 CP118122.1 Genbank gene 1684049 1684558 . - . ID=gene-PUW34_08210;Name=PUW34_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08210 CP118122.1 Protein Homology CDS 1684049 1684558 . - 0 ID=cds-WJG98357.1;Parent=gene-PUW34_08210;Dbxref=NCBI_GP:WJG98357.1;Name=WJG98357.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013403.2;locus_tag=PUW34_08210;product=hypothetical protein;protein_id=WJG98357.1;transl_table=11 CP118122.1 Genbank pseudogene 1684702 1686081 . - . ID=gene-PUW34_08215;Name=PUW34_08215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08215;pseudo=true CP118122.1 Protein Homology CDS 1684702 1686081 . - 0 ID=cds-PUW34_08215;Parent=gene-PUW34_08215;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=PUW34_08215;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1686135 1687154 . - . ID=gene-PUW34_08220;Name=PUW34_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08220 CP118122.1 Protein Homology CDS 1686135 1687154 . - 0 ID=cds-WJG98358.1;Parent=gene-PUW34_08220;Dbxref=NCBI_GP:WJG98358.1;Name=WJG98358.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=PUW34_08220;product=Zn-dependent oxidoreductase;protein_id=WJG98358.1;transl_table=11 CP118122.1 Genbank gene 1687165 1688379 . - . ID=gene-PUW34_08225;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=PUW34_08225 CP118122.1 Protein Homology CDS 1687165 1688379 . - 0 ID=cds-WJG98359.1;Parent=gene-PUW34_08225;Dbxref=NCBI_GP:WJG98359.1;Name=WJG98359.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=PUW34_08225;product=starvation-sensing protein RspA;protein_id=WJG98359.1;transl_table=11 CP118122.1 Genbank gene 1688501 1688827 . - . ID=gene-PUW34_08230;Name=PUW34_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08230 CP118122.1 Protein Homology CDS 1688501 1688827 . - 0 ID=cds-WJG98360.1;Parent=gene-PUW34_08230;Dbxref=NCBI_GP:WJG98360.1;Name=WJG98360.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=PUW34_08230;product=YnfA family protein;protein_id=WJG98360.1;transl_table=11 CP118122.1 Genbank gene 1688979 1689320 . + . ID=gene-PUW34_08235;Name=PUW34_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08235 CP118122.1 Protein Homology CDS 1688979 1689320 . + 0 ID=cds-WJG98361.1;Parent=gene-PUW34_08235;Dbxref=NCBI_GP:WJG98361.1;Name=WJG98361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=PUW34_08235;product=DUF1283 family protein;protein_id=WJG98361.1;transl_table=11 CP118122.1 Genbank gene 1689356 1689916 . + . ID=gene-PUW34_08240;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=PUW34_08240 CP118122.1 Protein Homology CDS 1689356 1689916 . + 0 ID=cds-WJG98362.1;Parent=gene-PUW34_08240;Dbxref=NCBI_GP:WJG98362.1;Name=WJG98362.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=PUW34_08240;product=spermidine N1-acetyltransferase;protein_id=WJG98362.1;transl_table=11 CP118122.1 Genbank gene 1689957 1690667 . - . ID=gene-PUW34_08245;Name=PUW34_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08245 CP118122.1 Protein Homology CDS 1689957 1690667 . - 0 ID=cds-WJG98363.1;Parent=gene-PUW34_08245;Dbxref=NCBI_GP:WJG98363.1;Name=WJG98363.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=PUW34_08245;product=YnfC family lipoprotein;protein_id=WJG98363.1;transl_table=11 CP118122.1 Genbank gene 1690771 1691079 . + . ID=gene-PUW34_08250;Name=PUW34_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08250 CP118122.1 Protein Homology CDS 1690771 1691079 . + 0 ID=cds-WJG98364.1;Parent=gene-PUW34_08250;Dbxref=NCBI_GP:WJG98364.1;Name=WJG98364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=PUW34_08250;product=DUF1161 domain-containing protein;protein_id=WJG98364.1;transl_table=11 CP118122.1 Genbank pseudogene 1691233 1693421 . + . ID=gene-PUW34_08255;Name=PUW34_08255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08255;pseudo=true CP118122.1 Protein Homology CDS 1691233 1693421 . + 0 ID=cds-PUW34_08255;Parent=gene-PUW34_08255;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460459.1;locus_tag=PUW34_08255;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1693520 1695955 . + . ID=gene-PUW34_08260;Name=PUW34_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08260 CP118122.1 Protein Homology CDS 1693520 1695955 . + 0 ID=cds-WJG98365.1;Parent=gene-PUW34_08260;Dbxref=NCBI_GP:WJG98365.1;Name=WJG98365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=PUW34_08260;product=dimethyl sulfoxide reductase subunit A;protein_id=WJG98365.1;transl_table=11 CP118122.1 Genbank pseudogene 1695966 1696582 . + . ID=gene-PUW34_08265;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=PUW34_08265;pseudo=true CP118122.1 Protein Homology CDS 1695966 1696582 . + 0 ID=cds-PUW34_08265;Parent=gene-PUW34_08265;Note=frameshifted;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PUW34_08265;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1696584 1697441 . + . ID=gene-PUW34_08270;Name=PUW34_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08270 CP118122.1 Protein Homology CDS 1696584 1697441 . + 0 ID=cds-WJG98366.1;Parent=gene-PUW34_08270;Dbxref=NCBI_GP:WJG98366.1;Name=WJG98366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=PUW34_08270;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJG98366.1;transl_table=11 CP118122.1 Genbank gene 1697484 1698098 . + . ID=gene-PUW34_08275;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=PUW34_08275 CP118122.1 Protein Homology CDS 1697484 1698098 . + 0 ID=cds-WJG98367.1;Parent=gene-PUW34_08275;Dbxref=NCBI_GP:WJG98367.1;Name=WJG98367.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=PUW34_08275;product=Tat proofreading chaperone DmsD;protein_id=WJG98367.1;transl_table=11 CP118122.1 Genbank gene 1698403 1699080 . + . ID=gene-PUW34_08280;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PUW34_08280 CP118122.1 Protein Homology CDS 1698403 1699080 . + 0 ID=cds-WJG98368.1;Parent=gene-PUW34_08280;Dbxref=NCBI_GP:WJG98368.1;Name=WJG98368.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=PUW34_08280;product=osmoprotectant ABC transporter permease OsmY;protein_id=WJG98368.1;transl_table=11 CP118122.1 Genbank gene 1699142 1700044 . + . ID=gene-PUW34_08285;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=PUW34_08285 CP118122.1 Protein Homology CDS 1699142 1700044 . + 0 ID=cds-WJG98369.1;Parent=gene-PUW34_08285;Dbxref=NCBI_GP:WJG98369.1;Name=WJG98369.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=PUW34_08285;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WJG98369.1;transl_table=11 CP118122.1 Genbank gene 1700054 1700701 . + . ID=gene-PUW34_08290;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=PUW34_08290 CP118122.1 Protein Homology CDS 1700054 1700701 . + 0 ID=cds-WJG98370.1;Parent=gene-PUW34_08290;Dbxref=NCBI_GP:WJG98370.1;Name=WJG98370.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=PUW34_08290;product=osmoprotectant ABC transporter permease OsmW;protein_id=WJG98370.1;transl_table=11 CP118122.1 Genbank gene 1700701 1701849 . + . ID=gene-PUW34_08295;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=PUW34_08295 CP118122.1 Protein Homology CDS 1700701 1701849 . + 0 ID=cds-WJG98371.1;Parent=gene-PUW34_08295;Dbxref=NCBI_GP:WJG98371.1;Name=WJG98371.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=PUW34_08295;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WJG98371.1;transl_table=11 CP118122.1 Genbank pseudogene 1701985 1703273 . + . ID=gene-PUW34_08300;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=pseudogene;locus_tag=PUW34_08300;pseudo=true CP118122.1 Protein Homology CDS 1701985 1703273 . + 0 ID=cds-PUW34_08300;Parent=gene-PUW34_08300;Note=frameshifted;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=PUW34_08300;product=voltage-gated ClC-type chloride channel ClcB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1703229 1703924 . - . ID=gene-PUW34_08305;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PUW34_08305 CP118122.1 Protein Homology CDS 1703229 1703924 . - 0 ID=cds-WJG98372.1;Parent=gene-PUW34_08305;Dbxref=NCBI_GP:WJG98372.1;Name=WJG98372.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=PUW34_08305;product=dethiobiotin synthase;protein_id=WJG98372.1;transl_table=11 CP118122.1 Genbank gene 1704050 1705270 . - . ID=gene-PUW34_08310;Name=PUW34_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08310 CP118122.1 Protein Homology CDS 1704050 1705270 . - 0 ID=cds-WJG98373.1;Parent=gene-PUW34_08310;Dbxref=NCBI_GP:WJG98373.1;Name=WJG98373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=PUW34_08310;product=ROK family transcriptional regulator;protein_id=WJG98373.1;transl_table=11 CP118122.1 Genbank gene 1705398 1706297 . - . ID=gene-PUW34_08315;Name=PUW34_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08315 CP118122.1 Protein Homology CDS 1705398 1706297 . - 0 ID=cds-WJG98374.1;Parent=gene-PUW34_08315;Dbxref=NCBI_GP:WJG98374.1;Name=WJG98374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=PUW34_08315;product=LysR family transcriptional regulator;protein_id=WJG98374.1;transl_table=11 CP118122.1 Genbank pseudogene 1706417 1707670 . + . ID=gene-PUW34_08320;Name=PUW34_08320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08320;pseudo=true CP118122.1 Protein Homology CDS 1706417 1707670 . + 0 ID=cds-PUW34_08320;Parent=gene-PUW34_08320;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=PUW34_08320;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1707737 1707829 . - . ID=gene-PUW34_08325;Name=PUW34_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08325 CP118122.1 Protein Homology CDS 1707737 1707829 . - 0 ID=cds-WJG98375.1;Parent=gene-PUW34_08325;Dbxref=NCBI_GP:WJG98375.1;Name=WJG98375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=PUW34_08325;product=KPN_01571 family protein;protein_id=WJG98375.1;transl_table=11 CP118122.1 Genbank pseudogene 1708101 1708217 . + . ID=gene-PUW34_08330;Name=PUW34_08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08330;pseudo=true CP118122.1 Protein Homology CDS 1708101 1708217 . + 0 ID=cds-PUW34_08330;Parent=gene-PUW34_08330;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033636.1;locus_tag=PUW34_08330;product=acid-shock protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1708216 1708312 . + . ID=gene-PUW34_08335;Name=PUW34_08335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08335;pseudo=true CP118122.1 Protein Homology CDS 1708216 1708312 . + 1 ID=cds-PUW34_08335;Parent=gene-PUW34_08335;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018135.2;locus_tag=PUW34_08335;product=acid-shock protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1708581 1709000 . + . ID=gene-PUW34_08340;Name=PUW34_08340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08340;pseudo=true CP118122.1 Protein Homology CDS 1708581 1709000 . + 0 ID=cds-PUW34_08340;Parent=gene-PUW34_08340;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=PUW34_08340;product=serine protease;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1709205 1710239 . + . ID=gene-PUW34_08345;Name=PUW34_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08345 CP118122.1 Protein Homology CDS 1709205 1710239 . + 0 ID=cds-WJG98376.1;Parent=gene-PUW34_08345;Dbxref=NCBI_GP:WJG98376.1;Name=WJG98376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=PUW34_08345;product=AI-2E family transporter;protein_id=WJG98376.1;transl_table=11 CP118122.1 Genbank gene 1710414 1711802 . - . ID=gene-PUW34_08350;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=PUW34_08350 CP118122.1 Protein Homology CDS 1710414 1711802 . - 0 ID=cds-WJG98377.1;Parent=gene-PUW34_08350;Dbxref=NCBI_GP:WJG98377.1;Name=WJG98377.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=PUW34_08350;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WJG98377.1;transl_table=11 CP118122.1 Genbank gene 1711813 1713342 . - . ID=gene-PUW34_08355;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=PUW34_08355 CP118122.1 Protein Homology CDS 1711813 1713342 . - 0 ID=cds-WJG98378.1;Parent=gene-PUW34_08355;Dbxref=NCBI_GP:WJG98378.1;Name=WJG98378.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=PUW34_08355;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WJG98378.1;transl_table=11 CP118122.1 Genbank pseudogene 1713793 1713872 . + . ID=gene-PUW34_08360;Name=PUW34_08360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08360;pseudo=true CP118122.1 Protein Homology CDS 1713793 1713872 . + 0 ID=cds-PUW34_08360;Parent=gene-PUW34_08360;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226730.1;locus_tag=PUW34_08360;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1713869 1714813 . + . ID=gene-PUW34_08365;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=PUW34_08365 CP118122.1 Protein Homology CDS 1713869 1714813 . + 0 ID=cds-WJG98379.1;Parent=gene-PUW34_08365;Dbxref=NCBI_GP:WJG98379.1;Name=WJG98379.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=PUW34_08365;product=DUF1471 family protein YdgH;protein_id=WJG98379.1;transl_table=11 CP118122.1 Genbank gene 1715112 1716494 . + . ID=gene-PUW34_08370;Name=PUW34_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08370 CP118122.1 Protein Homology CDS 1715112 1716494 . + 0 ID=cds-WJG98380.1;Parent=gene-PUW34_08370;Dbxref=NCBI_GP:WJG98380.1;Name=WJG98380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=PUW34_08370;product=amino acid permease;protein_id=WJG98380.1;transl_table=11 CP118122.1 Genbank gene 1716556 1716891 . - . ID=gene-PUW34_08375;Name=PUW34_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08375 CP118122.1 Protein Homology CDS 1716556 1716891 . - 0 ID=cds-WJG98381.1;Parent=gene-PUW34_08375;Dbxref=NCBI_GP:WJG98381.1;Name=WJG98381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=PUW34_08375;product=GlpM family protein;protein_id=WJG98381.1;transl_table=11 CP118122.1 Genbank gene 1717018 1717749 . + . ID=gene-PUW34_08380;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=PUW34_08380 CP118122.1 Protein Homology CDS 1717018 1717749 . + 0 ID=cds-WJG98382.1;Parent=gene-PUW34_08380;Dbxref=NCBI_GP:WJG98382.1;Name=WJG98382.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=PUW34_08380;product=two-component system response regulator RstA;protein_id=WJG98382.1;transl_table=11 CP118122.1 Genbank gene 1718229 1719374 . + . ID=gene-PUW34_08385;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=PUW34_08385 CP118122.1 Protein Homology CDS 1718229 1719374 . + 0 ID=cds-WJG98383.1;Parent=gene-PUW34_08385;Dbxref=NCBI_GP:WJG98383.1;Name=WJG98383.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=PUW34_08385;product=porin OmpS2;protein_id=WJG98383.1;transl_table=11 CP118122.1 Genbank pseudogene 1719527 1721233 . + . ID=gene-PUW34_08390;Name=PUW34_08390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08390;pseudo=true CP118122.1 Protein Homology CDS 1719527 1721233 . + 0 ID=cds-PUW34_08390;Parent=gene-PUW34_08390;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=PUW34_08390;product=amidohydrolase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1721344 1722645 . + . ID=gene-PUW34_08395;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=PUW34_08395 CP118122.1 Protein Homology CDS 1721344 1722645 . + 0 ID=cds-WJG98384.1;Parent=gene-PUW34_08395;Dbxref=NCBI_GP:WJG98384.1;Name=WJG98384.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=PUW34_08395;product=two-component system sensor histidine kinase RstB;protein_id=WJG98384.1;transl_table=11 CP118122.1 Genbank gene 1722721 1723650 . + . ID=gene-PUW34_08400;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=PUW34_08400 CP118122.1 Protein Homology CDS 1722721 1723650 . + 0 ID=cds-WJG98954.1;Parent=gene-PUW34_08400;Dbxref=NCBI_GP:WJG98954.1;Name=WJG98954.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=PUW34_08400;product=DNA replication terminus site-binding protein;protein_id=WJG98954.1;transl_table=11 CP118122.1 Genbank gene 1723647 1725050 . - . ID=gene-PUW34_08405;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=PUW34_08405 CP118122.1 Protein Homology CDS 1723647 1725050 . - 0 ID=cds-WJG98385.1;Parent=gene-PUW34_08405;Dbxref=NCBI_GP:WJG98385.1;Name=WJG98385.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=PUW34_08405;product=class II fumarate hydratase;protein_id=WJG98385.1;transl_table=11 CP118122.1 Genbank gene 1725218 1726864 . - . ID=gene-PUW34_08410;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=PUW34_08410 CP118122.1 Protein Homology CDS 1725218 1726864 . - 0 ID=cds-WJG98386.1;Parent=gene-PUW34_08410;Dbxref=NCBI_GP:WJG98386.1;Name=WJG98386.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=PUW34_08410;product=class I fumarate hydratase;protein_id=WJG98386.1;transl_table=11 CP118122.1 Genbank gene 1727064 1728239 . + . ID=gene-PUW34_08415;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=PUW34_08415 CP118122.1 Protein Homology CDS 1727064 1728239 . + 0 ID=cds-WJG98387.1;Parent=gene-PUW34_08415;Dbxref=NCBI_GP:WJG98387.1;Name=WJG98387.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=PUW34_08415;product=mannose-6-phosphate isomerase;protein_id=WJG98387.1;transl_table=11 CP118122.1 Genbank gene 1728342 1729850 . + . ID=gene-PUW34_08420;Name=PUW34_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08420 CP118122.1 Protein Homology CDS 1728342 1729850 . + 0 ID=cds-WJG98388.1;Parent=gene-PUW34_08420;Dbxref=NCBI_GP:WJG98388.1;Name=WJG98388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=PUW34_08420;product=YdgA family protein;protein_id=WJG98388.1;transl_table=11 CP118122.1 Genbank pseudogene 1729969 1730189 . + . ID=gene-PUW34_08425;Name=PUW34_08425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08425;pseudo=true CP118122.1 Protein Homology CDS 1729969 1730189 . + 0 ID=cds-PUW34_08425;Parent=gene-PUW34_08425;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=PUW34_08425;product=glucose PTS transporter subunit EIIB;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1730199 1730330 . + . ID=gene-PUW34_08430;Name=PUW34_08430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08430;pseudo=true CP118122.1 Protein Homology CDS 1730199 1730330 . + 0 ID=cds-PUW34_08430;Parent=gene-PUW34_08430;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=PUW34_08430;product=transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1730555 1731556 . + . ID=gene-PUW34_08435;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=PUW34_08435 CP118122.1 Protein Homology CDS 1730555 1731556 . + 0 ID=cds-WJG98389.1;Parent=gene-PUW34_08435;Dbxref=NCBI_GP:WJG98389.1;Name=WJG98389.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=PUW34_08435;product=adenosine deaminase;protein_id=WJG98389.1;transl_table=11 CP118122.1 Genbank gene 1731631 1732671 . - . ID=gene-PUW34_08440;Name=PUW34_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08440 CP118122.1 Protein Homology CDS 1731631 1732671 . - 0 ID=cds-WJG98390.1;Parent=gene-PUW34_08440;Dbxref=NCBI_GP:WJG98390.1;Name=WJG98390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=PUW34_08440;product=oxidoreductase;protein_id=WJG98390.1;transl_table=11 CP118122.1 Genbank gene 1732879 1733004 . + . ID=gene-PUW34_08445;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=PUW34_08445 CP118122.1 Protein Homology CDS 1732879 1733004 . + 0 ID=cds-WJG98391.1;Parent=gene-PUW34_08445;Dbxref=NCBI_GP:WJG98391.1;Name=WJG98391.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=PUW34_08445;product=division septum protein Blr;protein_id=WJG98391.1;transl_table=11 CP118122.1 Genbank gene 1733302 1733517 . + . ID=gene-PUW34_08450;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=PUW34_08450 CP118122.1 Protein Homology CDS 1733302 1733517 . + 0 ID=cds-WJG98392.1;Parent=gene-PUW34_08450;Dbxref=NCBI_GP:WJG98392.1;Name=WJG98392.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=PUW34_08450;product=transcription modulator YdgT;protein_id=WJG98392.1;transl_table=11 CP118122.1 Genbank gene 1733606 1734046 . + . ID=gene-PUW34_08455;Name=PUW34_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08455 CP118122.1 Protein Homology CDS 1733606 1734046 . + 0 ID=cds-WJG98393.1;Parent=gene-PUW34_08455;Dbxref=NCBI_GP:WJG98393.1;Name=WJG98393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=PUW34_08455;product=DUF2569 domain-containing protein;protein_id=WJG98393.1;transl_table=11 CP118122.1 Genbank gene 1734123 1734704 . + . ID=gene-PUW34_08460;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=PUW34_08460 CP118122.1 Protein Homology CDS 1734123 1734704 . + 0 ID=cds-WJG98394.1;Parent=gene-PUW34_08460;Dbxref=NCBI_GP:WJG98394.1;Name=WJG98394.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=PUW34_08460;product=electron transport complex subunit RsxA;protein_id=WJG98394.1;transl_table=11 CP118122.1 Genbank gene 1734704 1735282 . + . ID=gene-PUW34_08465;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=PUW34_08465 CP118122.1 Protein Homology CDS 1734704 1735282 . + 0 ID=cds-WJG98395.1;Parent=gene-PUW34_08465;Dbxref=NCBI_GP:WJG98395.1;Name=WJG98395.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=PUW34_08465;product=electron transport complex subunit RsxB;protein_id=WJG98395.1;transl_table=11 CP118122.1 Genbank gene 1735275 1737296 . + . ID=gene-PUW34_08470;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=PUW34_08470 CP118122.1 Protein Homology CDS 1735275 1737296 . + 0 ID=cds-WJG98396.1;Parent=gene-PUW34_08470;Dbxref=NCBI_GP:WJG98396.1;Name=WJG98396.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=PUW34_08470;product=electron transport complex subunit RsxC;protein_id=WJG98396.1;transl_table=11 CP118122.1 Genbank gene 1737296 1738354 . + . ID=gene-PUW34_08475;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=PUW34_08475 CP118122.1 Protein Homology CDS 1737296 1738354 . + 0 ID=cds-WJG98397.1;Parent=gene-PUW34_08475;Dbxref=NCBI_GP:WJG98397.1;Name=WJG98397.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=PUW34_08475;product=electron transport complex subunit RsxD;protein_id=WJG98397.1;transl_table=11 CP118122.1 Genbank gene 1738358 1738978 . + . ID=gene-PUW34_08480;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=PUW34_08480 CP118122.1 Protein Homology CDS 1738358 1738978 . + 0 ID=cds-WJG98398.1;Parent=gene-PUW34_08480;Dbxref=NCBI_GP:WJG98398.1;Name=WJG98398.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=PUW34_08480;product=electron transport complex subunit RsxG;protein_id=WJG98398.1;transl_table=11 CP118122.1 Genbank gene 1738981 1739673 . + . ID=gene-PUW34_08485;Name=PUW34_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08485 CP118122.1 Protein Homology CDS 1738981 1739673 . + 0 ID=cds-WJG98399.1;Parent=gene-PUW34_08485;Dbxref=NCBI_GP:WJG98399.1;Name=WJG98399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=PUW34_08485;product=electron transport complex subunit E;protein_id=WJG98399.1;transl_table=11 CP118122.1 Genbank gene 1739673 1740308 . + . ID=gene-PUW34_08490;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=PUW34_08490 CP118122.1 Protein Homology CDS 1739673 1740308 . + 0 ID=cds-WJG98400.1;Parent=gene-PUW34_08490;Dbxref=NCBI_GP:WJG98400.1;Name=WJG98400.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=PUW34_08490;product=endonuclease III;protein_id=WJG98400.1;transl_table=11 CP118122.1 Genbank pseudogene 1740909 1742413 . + . ID=gene-PUW34_08495;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=pseudogene;locus_tag=PUW34_08495;pseudo=true CP118122.1 Protein Homology CDS 1740909 1742413 . + 0 ID=cds-PUW34_08495;Parent=gene-PUW34_08495;Note=frameshifted;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=PUW34_08495;product=dipeptide/tripeptide permease DtpA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1742517 1743122 . + . ID=gene-PUW34_08500;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=PUW34_08500 CP118122.1 Protein Homology CDS 1742517 1743122 . + 0 ID=cds-WJG98401.1;Parent=gene-PUW34_08500;Dbxref=NCBI_GP:WJG98401.1;Name=WJG98401.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=PUW34_08500;product=glutathione transferase GstA;protein_id=WJG98401.1;transl_table=11 CP118122.1 Genbank gene 1743181 1744041 . - . ID=gene-PUW34_08505;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=PUW34_08505 CP118122.1 Protein Homology CDS 1743181 1744041 . - 0 ID=cds-WJG98402.1;Parent=gene-PUW34_08505;Dbxref=NCBI_GP:WJG98402.1;Name=WJG98402.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=PUW34_08505;product=pyridoxal kinase PdxY;protein_id=WJG98402.1;transl_table=11 CP118122.1 Genbank gene 1744100 1745374 . - . ID=gene-PUW34_08510;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=PUW34_08510 CP118122.1 Protein Homology CDS 1744100 1745374 . - 0 ID=cds-WJG98403.1;Parent=gene-PUW34_08510;Dbxref=NCBI_GP:WJG98403.1;Name=WJG98403.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=PUW34_08510;product=tyrosine--tRNA ligase;protein_id=WJG98403.1;transl_table=11 CP118122.1 Genbank gene 1745501 1746157 . - . ID=gene-PUW34_08515;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=PUW34_08515 CP118122.1 Protein Homology CDS 1745501 1746157 . - 0 ID=cds-WJG98404.1;Parent=gene-PUW34_08515;Dbxref=NCBI_GP:WJG98404.1;Name=WJG98404.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=PUW34_08515;product=pyridoxamine 5'-phosphate oxidase;protein_id=WJG98404.1;transl_table=11 CP118122.1 Genbank gene 1746216 1746545 . - . ID=gene-PUW34_08520;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=PUW34_08520 CP118122.1 Protein Homology CDS 1746216 1746545 . - 0 ID=cds-WJG98405.1;Parent=gene-PUW34_08520;Dbxref=NCBI_GP:WJG98405.1;Name=WJG98405.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=PUW34_08520;product=C-type lysozyme inhibitor;protein_id=WJG98405.1;transl_table=11 CP118122.1 Genbank gene 1746633 1747754 . - . ID=gene-PUW34_08525;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=PUW34_08525 CP118122.1 Protein Homology CDS 1746633 1747754 . - 0 ID=cds-WJG98406.1;Parent=gene-PUW34_08525;Dbxref=NCBI_GP:WJG98406.1;Name=WJG98406.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=PUW34_08525;product=anhydro-N-acetylmuramic acid kinase;protein_id=WJG98406.1;transl_table=11 CP118122.1 Genbank gene 1748026 1748493 . + . ID=gene-PUW34_08530;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=PUW34_08530 CP118122.1 Protein Homology CDS 1748026 1748493 . + 0 ID=cds-WJG98407.1;Parent=gene-PUW34_08530;Dbxref=NCBI_GP:WJG98407.1;Name=WJG98407.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=PUW34_08530;product=outer membrane lipoprotein SlyB;protein_id=WJG98407.1;transl_table=11 CP118122.1 Genbank gene 1748541 1748981 . - . ID=gene-PUW34_08535;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=PUW34_08535 CP118122.1 Protein Homology CDS 1748541 1748981 . - 0 ID=cds-WJG98408.1;Parent=gene-PUW34_08535;Dbxref=NCBI_GP:WJG98408.1;Name=WJG98408.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=PUW34_08535;product=transcriptional regulator SlyA;protein_id=WJG98408.1;transl_table=11 CP118122.1 Genbank gene 1749176 1749412 . + . ID=gene-PUW34_08540;Name=PUW34_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08540 CP118122.1 Protein Homology CDS 1749176 1749412 . + 0 ID=cds-WJG98409.1;Parent=gene-PUW34_08540;Dbxref=NCBI_GP:WJG98409.1;Name=WJG98409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=PUW34_08540;product=DUF1656 domain-containing protein;protein_id=WJG98409.1;transl_table=11 CP118122.1 Genbank gene 1749415 1750275 . + . ID=gene-PUW34_08545;Name=PUW34_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08545 CP118122.1 Protein Homology CDS 1749415 1750275 . + 0 ID=cds-WJG98410.1;Parent=gene-PUW34_08545;Dbxref=NCBI_GP:WJG98410.1;Name=WJG98410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=PUW34_08545;product=HlyD family secretion protein;protein_id=WJG98410.1;transl_table=11 CP118122.1 Genbank gene 1750275 1752314 . + . ID=gene-PUW34_08550;Name=PUW34_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08550 CP118122.1 Protein Homology CDS 1750275 1752314 . + 0 ID=cds-WJG98411.1;Parent=gene-PUW34_08550;Dbxref=NCBI_GP:WJG98411.1;Name=WJG98411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=PUW34_08550;product=FUSC family protein;protein_id=WJG98411.1;transl_table=11 CP118122.1 Genbank gene 1752290 1752811 . - . ID=gene-PUW34_08555;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=PUW34_08555 CP118122.1 Protein Homology CDS 1752290 1752811 . - 0 ID=cds-WJG98412.1;Parent=gene-PUW34_08555;Dbxref=NCBI_GP:WJG98412.1;Name=WJG98412.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=PUW34_08555;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WJG98412.1;transl_table=11 CP118122.1 Genbank pseudogene 1752891 1753787 . - . ID=gene-PUW34_08560;Name=PUW34_08560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08560;pseudo=true CP118122.1 Protein Homology CDS 1752891 1753787 . - 0 ID=cds-PUW34_08560;Parent=gene-PUW34_08560;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=PUW34_08560;product=aldo/keto reductase family oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1753838 1754077 . - . ID=gene-PUW34_08565;Name=PUW34_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08565 CP118122.1 Protein Homology CDS 1753838 1754077 . - 0 ID=cds-WJG98413.1;Parent=gene-PUW34_08565;Dbxref=NCBI_GP:WJG98413.1;Name=WJG98413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=PUW34_08565;product=DUF1289 domain-containing protein;protein_id=WJG98413.1;transl_table=11 CP118122.1 Genbank gene 1754180 1754779 . + . ID=gene-PUW34_08570;Name=PUW34_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08570 CP118122.1 Protein Homology CDS 1754180 1754779 . + 0 ID=cds-WJG98414.1;Parent=gene-PUW34_08570;Dbxref=NCBI_GP:WJG98414.1;Name=WJG98414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=PUW34_08570;product=TetR/AcrR family transcriptional regulator;protein_id=WJG98414.1;transl_table=11 CP118122.1 Genbank pseudogene 1754838 1755934 . + . ID=gene-PUW34_08575;Name=PUW34_08575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08575;pseudo=true CP118122.1 Protein Homology CDS 1754838 1755934 . + 0 ID=cds-PUW34_08575;Parent=gene-PUW34_08575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=PUW34_08575;product=alkene reductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1756003 1756410 . + . ID=gene-PUW34_08580;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=PUW34_08580 CP118122.1 Protein Homology CDS 1756003 1756410 . + 0 ID=cds-WJG98415.1;Parent=gene-PUW34_08580;Dbxref=NCBI_GP:WJG98415.1;Name=WJG98415.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=PUW34_08580;product=lactoylglutathione lyase;protein_id=WJG98415.1;transl_table=11 CP118122.1 Genbank pseudogene 1756511 1757157 . + . ID=gene-PUW34_08585;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=pseudogene;locus_tag=PUW34_08585;pseudo=true CP118122.1 Protein Homology CDS 1756511 1757157 . + 0 ID=cds-PUW34_08585;Parent=gene-PUW34_08585;Note=frameshifted;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=PUW34_08585;product=ribonuclease T;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1757235 1757582 . - . ID=gene-PUW34_08590;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=PUW34_08590 CP118122.1 Protein Homology CDS 1757235 1757582 . - 0 ID=cds-WJG98416.1;Parent=gene-PUW34_08590;Dbxref=NCBI_GP:WJG98416.1;Name=WJG98416.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=PUW34_08590;product=monothiol glutaredoxin 4;protein_id=WJG98416.1;transl_table=11 CP118122.1 Genbank gene 1757918 1758739 . + . ID=gene-PUW34_08595;Name=PUW34_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08595 CP118122.1 Protein Homology CDS 1757918 1758739 . + 0 ID=cds-WJG98417.1;Parent=gene-PUW34_08595;Dbxref=NCBI_GP:WJG98417.1;Name=WJG98417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=PUW34_08595;product=C40 family peptidase;protein_id=WJG98417.1;transl_table=11 CP118122.1 Genbank gene 1758866 1759447 . + . ID=gene-PUW34_08600;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=PUW34_08600 CP118122.1 Protein Homology CDS 1758866 1759447 . + 0 ID=cds-WJG98418.1;Parent=gene-PUW34_08600;Dbxref=NCBI_GP:WJG98418.1;Name=WJG98418.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=PUW34_08600;product=superoxide dismutase [Fe];protein_id=WJG98418.1;transl_table=11 CP118122.1 Genbank gene 1759530 1759619 . - . ID=gene-PUW34_08605;Name=PUW34_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08605 CP118122.1 Protein Homology CDS 1759530 1759619 . - 0 ID=cds-WJG98419.1;Parent=gene-PUW34_08605;Dbxref=NCBI_GP:WJG98419.1;Name=WJG98419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=PUW34_08605;product=YnhF family membrane protein;protein_id=WJG98419.1;transl_table=11 CP118122.1 Genbank gene 1759915 1760940 . + . ID=gene-PUW34_08610;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=PUW34_08610 CP118122.1 Protein Homology CDS 1759915 1760940 . + 0 ID=cds-WJG98420.1;Parent=gene-PUW34_08610;Dbxref=NCBI_GP:WJG98420.1;Name=WJG98420.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=PUW34_08610;product=HTH-type transcriptional repressor PurR;protein_id=WJG98420.1;transl_table=11 CP118122.1 Genbank gene 1760937 1761869 . - . ID=gene-PUW34_08615;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=PUW34_08615 CP118122.1 Protein Homology CDS 1760937 1761869 . - 0 ID=cds-WJG98421.1;Parent=gene-PUW34_08615;Dbxref=NCBI_GP:WJG98421.1;Name=WJG98421.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=PUW34_08615;product=DNA-binding transcriptional activator PunR;protein_id=WJG98421.1;transl_table=11 CP118122.1 Genbank gene 1761982 1763187 . + . ID=gene-PUW34_08620;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=PUW34_08620 CP118122.1 Protein Homology CDS 1761982 1763187 . + 0 ID=cds-WJG98422.1;Parent=gene-PUW34_08620;Dbxref=NCBI_GP:WJG98422.1;Name=WJG98422.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=PUW34_08620;product=purine nucleoside transporter PunC;protein_id=WJG98422.1;transl_table=11 CP118122.1 Genbank gene 1763477 1764625 . + . ID=gene-PUW34_08625;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=PUW34_08625 CP118122.1 Protein Homology CDS 1763477 1764625 . + 0 ID=cds-WJG98423.1;Parent=gene-PUW34_08625;Dbxref=NCBI_GP:WJG98423.1;Name=WJG98423.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=PUW34_08625;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WJG98423.1;transl_table=11 CP118122.1 Genbank gene 1764667 1765308 . - . ID=gene-PUW34_08630;Name=PUW34_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08630 CP118122.1 Protein Homology CDS 1764667 1765308 . - 0 ID=cds-WJG98424.1;Parent=gene-PUW34_08630;Dbxref=NCBI_GP:WJG98424.1;Name=WJG98424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=PUW34_08630;product=riboflavin synthase;protein_id=WJG98424.1;transl_table=11 CP118122.1 Genbank pseudogene 1765525 1766897 . + . ID=gene-PUW34_08635;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=pseudogene;locus_tag=PUW34_08635;pseudo=true CP118122.1 Protein Homology CDS 1765525 1766897 . + 0 ID=cds-PUW34_08635;Parent=gene-PUW34_08635;Note=frameshifted;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=PUW34_08635;product=multidrug efflux MATE transporter MdtK;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1767049 1767125 . + . ID=gene-PUW34_08640;Name=PUW34_08640;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_08640 CP118122.1 tRNAscan-SE tRNA 1767049 1767125 . + . ID=rna-PUW34_08640;Parent=gene-PUW34_08640;anticodon=(pos:1767083..1767085);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_08640;product=tRNA-Val CP118122.1 tRNAscan-SE exon 1767049 1767125 . + . ID=exon-PUW34_08640-1;Parent=rna-PUW34_08640;anticodon=(pos:1767083..1767085);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_08640;product=tRNA-Val CP118122.1 Genbank gene 1767136 1767212 . + . ID=gene-PUW34_08645;Name=PUW34_08645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_08645 CP118122.1 tRNAscan-SE tRNA 1767136 1767212 . + . ID=rna-PUW34_08645;Parent=gene-PUW34_08645;anticodon=(pos:1767170..1767172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_08645;product=tRNA-Val CP118122.1 tRNAscan-SE exon 1767136 1767212 . + . ID=exon-PUW34_08645-1;Parent=rna-PUW34_08645;anticodon=(pos:1767170..1767172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_08645;product=tRNA-Val CP118122.1 Genbank gene 1767370 1768428 . - . ID=gene-PUW34_08650;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=PUW34_08650 CP118122.1 Protein Homology CDS 1767370 1768428 . - 0 ID=cds-WJG98425.1;Parent=gene-PUW34_08650;Dbxref=NCBI_GP:WJG98425.1;Name=WJG98425.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=PUW34_08650;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WJG98425.1;transl_table=11 CP118122.1 Genbank gene 1768425 1769204 . - . ID=gene-PUW34_08655;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=PUW34_08655 CP118122.1 Protein Homology CDS 1768425 1769204 . - 0 ID=cds-WJG98426.1;Parent=gene-PUW34_08655;Dbxref=NCBI_GP:WJG98426.1;Name=WJG98426.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=PUW34_08655;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WJG98426.1;transl_table=11 CP118122.1 Genbank gene 1769205 1769471 . - . ID=gene-PUW34_08660;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=PUW34_08660 CP118122.1 Protein Homology CDS 1769205 1769471 . - 0 ID=cds-WJG98427.1;Parent=gene-PUW34_08660;Dbxref=NCBI_GP:WJG98427.1;Name=WJG98427.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=PUW34_08660;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WJG98427.1;transl_table=11 CP118122.1 Genbank gene 1769468 1770115 . - . ID=gene-PUW34_08665;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=PUW34_08665 CP118122.1 Protein Homology CDS 1769468 1770115 . - 0 ID=cds-WJG98428.1;Parent=gene-PUW34_08665;Dbxref=NCBI_GP:WJG98428.1;Name=WJG98428.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=PUW34_08665;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WJG98428.1;transl_table=11 CP118122.1 Genbank gene 1770183 1771151 . - . ID=gene-PUW34_08670;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=PUW34_08670 CP118122.1 Protein Homology CDS 1770183 1771151 . - 0 ID=cds-WJG98429.1;Parent=gene-PUW34_08670;Dbxref=NCBI_GP:WJG98429.1;Name=WJG98429.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=PUW34_08670;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WJG98429.1;transl_table=11 CP118122.1 Genbank gene 1771132 1771506 . - . ID=gene-PUW34_08675;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=PUW34_08675 CP118122.1 Protein Homology CDS 1771132 1771506 . - 0 ID=cds-WJG98430.1;Parent=gene-PUW34_08675;Dbxref=NCBI_GP:WJG98430.1;Name=WJG98430.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=PUW34_08675;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WJG98430.1;transl_table=11 CP118122.1 Genbank gene 1771487 1771864 . - . ID=gene-PUW34_08680;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=PUW34_08680 CP118122.1 Protein Homology CDS 1771487 1771864 . - 0 ID=cds-WJG98955.1;Parent=gene-PUW34_08680;Dbxref=NCBI_GP:WJG98955.1;Name=WJG98955.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=PUW34_08680;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WJG98955.1;transl_table=11 CP118122.1 Genbank gene 1771867 1773168 . - . ID=gene-PUW34_08685;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=PUW34_08685 CP118122.1 Protein Homology CDS 1771867 1773168 . - 0 ID=cds-WJG98431.1;Parent=gene-PUW34_08685;Dbxref=NCBI_GP:WJG98431.1;Name=WJG98431.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=PUW34_08685;product=SctN family type III secretion system ATPase SsaN;protein_id=WJG98431.1;transl_table=11 CP118122.1 Genbank gene 1773158 1775203 . - . ID=gene-PUW34_08690;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=PUW34_08690 CP118122.1 Protein Homology CDS 1773158 1775203 . - 0 ID=cds-WJG98432.1;Parent=gene-PUW34_08690;Dbxref=NCBI_GP:WJG98432.1;Name=WJG98432.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=PUW34_08690;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WJG98432.1;transl_table=11 CP118122.1 Genbank gene 1775188 1775556 . - . ID=gene-PUW34_08695;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=PUW34_08695 CP118122.1 Protein Homology CDS 1775188 1775556 . - 0 ID=cds-WJG98433.1;Parent=gene-PUW34_08695;Dbxref=NCBI_GP:WJG98433.1;Name=WJG98433.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=PUW34_08695;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WJG98433.1;transl_table=11 CP118122.1 Genbank gene 1775614 1776630 . - . ID=gene-PUW34_08700;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=PUW34_08700 CP118122.1 Protein Homology CDS 1775614 1776630 . - 0 ID=cds-WJG98434.1;Parent=gene-PUW34_08700;Dbxref=NCBI_GP:WJG98434.1;Name=WJG98434.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=PUW34_08700;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WJG98434.1;transl_table=11 CP118122.1 Genbank gene 1776596 1777270 . - . ID=gene-PUW34_08705;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=PUW34_08705 CP118122.1 Protein Homology CDS 1776596 1777270 . - 0 ID=cds-WJG98435.1;Parent=gene-PUW34_08705;Dbxref=NCBI_GP:WJG98435.1;Name=WJG98435.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=PUW34_08705;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WJG98435.1;transl_table=11 CP118122.1 Genbank gene 1777267 1777815 . - . ID=gene-PUW34_08710;Name=PUW34_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08710 CP118122.1 Protein Homology CDS 1777267 1777815 . - 0 ID=cds-WJG98956.1;Parent=gene-PUW34_08710;Dbxref=NCBI_GP:WJG98956.1;Name=WJG98956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=PUW34_08710;product=type III secretion system domain-containing protein;protein_id=WJG98956.1;transl_table=11 CP118122.1 Genbank gene 1777823 1778581 . - . ID=gene-PUW34_08715;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=PUW34_08715 CP118122.1 Protein Homology CDS 1777823 1778581 . - 0 ID=cds-WJG98436.1;Parent=gene-PUW34_08715;Dbxref=NCBI_GP:WJG98436.1;Name=WJG98436.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=PUW34_08715;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WJG98436.1;transl_table=11 CP118122.1 Genbank gene 1778578 1778826 . - . ID=gene-PUW34_08720;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=PUW34_08720 CP118122.1 Protein Homology CDS 1778578 1778826 . - 0 ID=cds-WJG98957.1;Parent=gene-PUW34_08720;Dbxref=NCBI_GP:WJG98957.1;Name=WJG98957.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460373.1;locus_tag=PUW34_08720;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WJG98957.1;transl_table=11 CP118122.1 Genbank gene 1778838 1779128 . - . ID=gene-PUW34_08725;Name=PUW34_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08725 CP118122.1 Protein Homology CDS 1778838 1779128 . - 0 ID=cds-WJG98437.1;Parent=gene-PUW34_08725;Dbxref=NCBI_GP:WJG98437.1;Name=WJG98437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=PUW34_08725;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WJG98437.1;transl_table=11 CP118122.1 Genbank gene 1779106 1779321 . - . ID=gene-PUW34_08730;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=PUW34_08730 CP118122.1 Protein Homology CDS 1779106 1779321 . - 0 ID=cds-WJG98438.1;Parent=gene-PUW34_08730;Dbxref=NCBI_GP:WJG98438.1;Name=WJG98438.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=PUW34_08730;product=type III secretion system needle filament protein SsaG;protein_id=WJG98438.1;transl_table=11 CP118122.1 Genbank gene 1779415 1780104 . - . ID=gene-PUW34_08735;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=PUW34_08735 CP118122.1 Protein Homology CDS 1779415 1780104 . - 0 ID=cds-WJG98439.1;Parent=gene-PUW34_08735;Dbxref=NCBI_GP:WJG98439.1;Name=WJG98439.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=PUW34_08735;product=pathogenicity island 2 effector protein SseG;protein_id=WJG98439.1;transl_table=11 CP118122.1 Genbank gene 1780101 1780883 . - . ID=gene-PUW34_08740;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=PUW34_08740 CP118122.1 Protein Homology CDS 1780101 1780883 . - 0 ID=cds-WJG98440.1;Parent=gene-PUW34_08740;Dbxref=NCBI_GP:WJG98440.1;Name=WJG98440.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=PUW34_08740;product=type III secretion systems effector SseF;protein_id=WJG98440.1;transl_table=11 CP118122.1 Genbank gene 1780899 1781333 . - . ID=gene-PUW34_08745;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=PUW34_08745 CP118122.1 Protein Homology CDS 1780899 1781333 . - 0 ID=cds-WJG98441.1;Parent=gene-PUW34_08745;Dbxref=NCBI_GP:WJG98441.1;Name=WJG98441.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=PUW34_08745;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WJG98441.1;transl_table=11 CP118122.1 Genbank gene 1781385 1781801 . - . ID=gene-PUW34_08750;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=PUW34_08750 CP118122.1 Protein Homology CDS 1781385 1781801 . - 0 ID=cds-WJG98442.1;Parent=gene-PUW34_08750;Dbxref=NCBI_GP:WJG98442.1;Name=WJG98442.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=PUW34_08750;product=LcrR family type III secretion system chaperone SseE;protein_id=WJG98442.1;transl_table=11 CP118122.1 Genbank gene 1781804 1782391 . - . ID=gene-PUW34_08755;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=PUW34_08755 CP118122.1 Protein Homology CDS 1781804 1782391 . - 0 ID=cds-WJG98443.1;Parent=gene-PUW34_08755;Dbxref=NCBI_GP:WJG98443.1;Name=WJG98443.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=PUW34_08755;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WJG98443.1;transl_table=11 CP118122.1 Genbank gene 1782407 1783861 . - . ID=gene-PUW34_08760;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=PUW34_08760 CP118122.1 Protein Homology CDS 1782407 1783861 . - 0 ID=cds-WJG98444.1;Parent=gene-PUW34_08760;Dbxref=NCBI_GP:WJG98444.1;Name=WJG98444.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=PUW34_08760;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WJG98444.1;transl_table=11 CP118122.1 Genbank gene 1783864 1784337 . - . ID=gene-PUW34_08765;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=PUW34_08765 CP118122.1 Protein Homology CDS 1783864 1784337 . - 0 ID=cds-WJG98445.1;Parent=gene-PUW34_08765;Dbxref=NCBI_GP:WJG98445.1;Name=WJG98445.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=PUW34_08765;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WJG98445.1;transl_table=11 CP118122.1 Genbank pseudogene 1784334 1784923 . - . ID=gene-PUW34_08770;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=pseudogene;locus_tag=PUW34_08770;pseudo=true CP118122.1 Protein Homology CDS 1784334 1784923 . - 0 ID=cds-PUW34_08770;Parent=gene-PUW34_08770;Note=frameshifted;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=PUW34_08770;product=SPI-2 type III secretion system translocon protein SseB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1784930 1785256 . - . ID=gene-PUW34_08775;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PUW34_08775 CP118122.1 Protein Homology CDS 1784930 1785256 . - 0 ID=cds-WJG98958.1;Parent=gene-PUW34_08775;Dbxref=NCBI_GP:WJG98958.1;Name=WJG98958.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=PUW34_08775;product=SPI-2 type III secretion system chaperone SseA;protein_id=WJG98958.1;transl_table=11 CP118122.1 Genbank gene 1785459 1785701 . - . ID=gene-PUW34_08780;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=PUW34_08780 CP118122.1 Protein Homology CDS 1785459 1785701 . - 0 ID=cds-WJG98446.1;Parent=gene-PUW34_08780;Dbxref=NCBI_GP:WJG98446.1;Name=WJG98446.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=PUW34_08780;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WJG98446.1;transl_table=11 CP118122.1 Genbank gene 1785709 1786920 . - . ID=gene-PUW34_08785;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=PUW34_08785 CP118122.1 Protein Homology CDS 1785709 1786920 . - 0 ID=cds-WJG98447.1;Parent=gene-PUW34_08785;Dbxref=NCBI_GP:WJG98447.1;Name=WJG98447.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=PUW34_08785;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WJG98447.1;transl_table=11 CP118122.1 Genbank gene 1786901 1788394 . - . ID=gene-PUW34_08790;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=PUW34_08790 CP118122.1 Protein Homology CDS 1786901 1788394 . - 0 ID=cds-WJG98448.1;Parent=gene-PUW34_08790;Dbxref=NCBI_GP:WJG98448.1;Name=WJG98448.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=PUW34_08790;product=SPI-2 type III secretion system protein SpiA;protein_id=WJG98448.1;transl_table=11 CP118122.1 Genbank gene 1788396 1788797 . - . ID=gene-PUW34_08795;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=PUW34_08795 CP118122.1 Protein Homology CDS 1788396 1788797 . - 0 ID=cds-WJG98449.1;Parent=gene-PUW34_08795;Dbxref=NCBI_GP:WJG98449.1;Name=WJG98449.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=PUW34_08795;product=SPI-2 type III secretion system protein SpiC;protein_id=WJG98449.1;transl_table=11 CP118122.1 Genbank gene 1789198 1791960 . + . ID=gene-PUW34_08800;Name=PUW34_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08800 CP118122.1 Protein Homology CDS 1789198 1791960 . + 0 ID=cds-WJG98450.1;Parent=gene-PUW34_08800;Dbxref=NCBI_GP:WJG98450.1;Name=WJG98450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=PUW34_08800;product=two component system sensor kinase;protein_id=WJG98450.1;transl_table=11 CP118122.1 Genbank gene 1791991 1792629 . + . ID=gene-PUW34_08805;Name=PUW34_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08805 CP118122.1 Protein Homology CDS 1791991 1792629 . + 0 ID=cds-WJG98451.1;Parent=gene-PUW34_08805;Dbxref=NCBI_GP:WJG98451.1;Name=WJG98451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=PUW34_08805;product=two component system response regulator;protein_id=WJG98451.1;transl_table=11 CP118122.1 Genbank gene 1792808 1793536 . + . ID=gene-PUW34_08810;Name=PUW34_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08810 CP118122.1 Protein Homology CDS 1792808 1793536 . + 0 ID=cds-WJG98452.1;Parent=gene-PUW34_08810;Dbxref=NCBI_GP:WJG98452.1;Name=WJG98452.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=PUW34_08810;product=MerR family transcriptional regulator;protein_id=WJG98452.1;transl_table=11 CP118122.1 Genbank gene 1793709 1794668 . + . ID=gene-PUW34_08815;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=PUW34_08815 CP118122.1 Protein Homology CDS 1793709 1794668 . + 0 ID=cds-WJG98453.1;Parent=gene-PUW34_08815;Dbxref=NCBI_GP:WJG98453.1;Name=WJG98453.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=PUW34_08815;product=transcriptional regulator MlrB;protein_id=WJG98453.1;transl_table=11 CP118122.1 Genbank gene 1794790 1795002 . - . ID=gene-PUW34_08820;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=PUW34_08820 CP118122.1 Protein Homology CDS 1794790 1795002 . - 0 ID=cds-WJG98454.1;Parent=gene-PUW34_08820;Dbxref=NCBI_GP:WJG98454.1;Name=WJG98454.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=PUW34_08820;product=fumarate hydratase FumD;protein_id=WJG98454.1;transl_table=11 CP118122.1 Genbank gene 1795100 1795720 . - . ID=gene-PUW34_08825;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=PUW34_08825 CP118122.1 Protein Homology CDS 1795100 1795720 . - 0 ID=cds-WJG98455.1;Parent=gene-PUW34_08825;Dbxref=NCBI_GP:WJG98455.1;Name=WJG98455.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=PUW34_08825;product=tetrathionate respiration response regulator TtrR;protein_id=WJG98455.1;transl_table=11 CP118122.1 Genbank gene 1795695 1797473 . - . ID=gene-PUW34_08830;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=PUW34_08830 CP118122.1 Protein Homology CDS 1795695 1797473 . - 0 ID=cds-WJG98456.1;Parent=gene-PUW34_08830;Dbxref=NCBI_GP:WJG98456.1;Name=WJG98456.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=PUW34_08830;product=tetrathionate respiration histidine kinase TtrS;protein_id=WJG98456.1;transl_table=11 CP118122.1 Genbank pseudogene 1797637 1798390 . + . ID=gene-PUW34_08835;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=pseudogene;locus_tag=PUW34_08835;pseudo=true CP118122.1 Protein Homology CDS 1797637 1798390 . + 0 ID=cds-PUW34_08835;Parent=gene-PUW34_08835;Note=frameshifted;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460350.1;locus_tag=PUW34_08835;product=tetrathionate reductase subunit TtrB;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1798391 1799408 . + . ID=gene-PUW34_08840;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=pseudogene;locus_tag=PUW34_08840;pseudo=true CP118122.1 Protein Homology CDS 1798391 1799408 . + 0 ID=cds-PUW34_08840;Parent=gene-PUW34_08840;Note=frameshifted;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=PUW34_08840;product=tetrathionate reductase subunit TtrC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1799401 1802463 . + . ID=gene-PUW34_08845;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=PUW34_08845 CP118122.1 Protein Homology CDS 1799401 1802463 . + 0 ID=cds-WJG98457.1;Parent=gene-PUW34_08845;Dbxref=NCBI_GP:WJG98457.1;Name=WJG98457.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=PUW34_08845;product=tetrathionate reductase subunit TtrA;protein_id=WJG98457.1;transl_table=11 CP118122.1 Genbank gene 1802786 1804012 . + . ID=gene-PUW34_08850;Name=PUW34_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08850 CP118122.1 Protein Homology CDS 1802786 1804012 . + 0 ID=cds-WJG98458.1;Parent=gene-PUW34_08850;Dbxref=NCBI_GP:WJG98458.1;Name=WJG98458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=PUW34_08850;product=PfkB family carbohydrate kinase;protein_id=WJG98458.1;transl_table=11 CP118122.1 Genbank pseudogene 1804024 1804761 . + . ID=gene-PUW34_08855;Name=PUW34_08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08855;pseudo=true CP118122.1 Protein Homology CDS 1804024 1804761 . + 0 ID=cds-PUW34_08855;Parent=gene-PUW34_08855;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=PUW34_08855;product=glutamine amidotransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1804821 1805714 . + . ID=gene-PUW34_08860;Name=PUW34_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08860 CP118122.1 Protein Homology CDS 1804821 1805714 . + 0 ID=cds-WJG98459.1;Parent=gene-PUW34_08860;Dbxref=NCBI_GP:WJG98459.1;Name=WJG98459.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=PUW34_08860;product=proline iminopeptidase-family hydrolase;protein_id=WJG98459.1;transl_table=11 CP118122.1 Genbank gene 1805736 1807079 . + . ID=gene-PUW34_08865;Name=PUW34_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08865 CP118122.1 Protein Homology CDS 1805736 1807079 . + 0 ID=cds-WJG98460.1;Parent=gene-PUW34_08865;Dbxref=NCBI_GP:WJG98460.1;Name=WJG98460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=PUW34_08865;product=APC family permease;protein_id=WJG98460.1;transl_table=11 CP118122.1 Genbank pseudogene 1807481 1808892 . + . ID=gene-PUW34_08870;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=pseudogene;locus_tag=PUW34_08870;pseudo=true CP118122.1 Protein Homology CDS 1807481 1808892 . + 0 ID=cds-PUW34_08870;Parent=gene-PUW34_08870;Note=frameshifted;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=PUW34_08870;product=pyruvate kinase PykF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1809202 1809438 . + . ID=gene-PUW34_08875;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=PUW34_08875 CP118122.1 Protein Homology CDS 1809202 1809438 . + 0 ID=cds-WJG98461.1;Parent=gene-PUW34_08875;Dbxref=NCBI_GP:WJG98461.1;Name=WJG98461.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=PUW34_08875;product=murein lipoprotein Lpp;protein_id=WJG98461.1;transl_table=11 CP118122.1 Genbank gene 1809521 1809763 . + . ID=gene-PUW34_08880;Name=PUW34_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08880 CP118122.1 Protein Homology CDS 1809521 1809763 . + 0 ID=cds-WJG98462.1;Parent=gene-PUW34_08880;Dbxref=NCBI_GP:WJG98462.1;Name=WJG98462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082333.1;locus_tag=PUW34_08880;product=major outer membrane lipoprotein;protein_id=WJG98462.1;transl_table=11 CP118122.1 Genbank pseudogene 1809829 1810830 . - . ID=gene-PUW34_08885;Name=PUW34_08885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08885;pseudo=true CP118122.1 Protein Homology CDS 1809829 1810830 . - 0 ID=cds-PUW34_08885;Parent=gene-PUW34_08885;Note=internal stop;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=PUW34_08885;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1810985 1811401 . - . ID=gene-PUW34_08890;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=PUW34_08890 CP118122.1 Protein Homology CDS 1810985 1811401 . - 0 ID=cds-WJG98463.1;Parent=gene-PUW34_08890;Dbxref=NCBI_GP:WJG98463.1;Name=WJG98463.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=PUW34_08890;product=cysteine desulfuration protein SufE;protein_id=WJG98463.1;transl_table=11 CP118122.1 Genbank gene 1811414 1812634 . - . ID=gene-PUW34_08895;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=PUW34_08895 CP118122.1 Protein Homology CDS 1811414 1812634 . - 0 ID=cds-WJG98464.1;Parent=gene-PUW34_08895;Dbxref=NCBI_GP:WJG98464.1;Name=WJG98464.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=PUW34_08895;product=cysteine desulfurase SufS;protein_id=WJG98464.1;transl_table=11 CP118122.1 Genbank gene 1812631 1813902 . - . ID=gene-PUW34_08900;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=PUW34_08900 CP118122.1 Protein Homology CDS 1812631 1813902 . - 0 ID=cds-WJG98465.1;Parent=gene-PUW34_08900;Dbxref=NCBI_GP:WJG98465.1;Name=WJG98465.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=PUW34_08900;product=Fe-S cluster assembly protein SufD;protein_id=WJG98465.1;transl_table=11 CP118122.1 Genbank gene 1813877 1814623 . - . ID=gene-PUW34_08905;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=PUW34_08905 CP118122.1 Protein Homology CDS 1813877 1814623 . - 0 ID=cds-WJG98466.1;Parent=gene-PUW34_08905;Dbxref=NCBI_GP:WJG98466.1;Name=WJG98466.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=PUW34_08905;product=Fe-S cluster assembly ATPase SufC;protein_id=WJG98466.1;transl_table=11 CP118122.1 Genbank gene 1814640 1816127 . - . ID=gene-PUW34_08910;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=PUW34_08910 CP118122.1 Protein Homology CDS 1814640 1816127 . - 0 ID=cds-WJG98467.1;Parent=gene-PUW34_08910;Dbxref=NCBI_GP:WJG98467.1;Name=WJG98467.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=PUW34_08910;product=Fe-S cluster assembly protein SufB;protein_id=WJG98467.1;transl_table=11 CP118122.1 Genbank gene 1816136 1816504 . - . ID=gene-PUW34_08915;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=PUW34_08915 CP118122.1 Protein Homology CDS 1816136 1816504 . - 0 ID=cds-WJG98468.1;Parent=gene-PUW34_08915;Dbxref=NCBI_GP:WJG98468.1;Name=WJG98468.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=PUW34_08915;product=Fe-S cluster assembly scaffold SufA;protein_id=WJG98468.1;transl_table=11 CP118122.1 Genbank gene 1816931 1818277 . + . ID=gene-PUW34_08920;Name=PUW34_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08920 CP118122.1 Protein Homology CDS 1816931 1818277 . + 0 ID=cds-WJG98469.1;Parent=gene-PUW34_08920;Dbxref=NCBI_GP:WJG98469.1;Name=WJG98469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=PUW34_08920;product=L-cystine transporter;protein_id=WJG98469.1;transl_table=11 CP118122.1 Genbank gene 1818565 1818753 . - . ID=gene-PUW34_08925;Name=PUW34_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08925 CP118122.1 Protein Homology CDS 1818565 1818753 . - 0 ID=cds-WJG98470.1;Parent=gene-PUW34_08925;Dbxref=NCBI_GP:WJG98470.1;Name=WJG98470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=PUW34_08925;product=YdiH family protein;protein_id=WJG98470.1;transl_table=11 CP118122.1 Genbank gene 1818852 1819262 . - . ID=gene-PUW34_08930;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=PUW34_08930 CP118122.1 Protein Homology CDS 1818852 1819262 . - 0 ID=cds-WJG98471.1;Parent=gene-PUW34_08930;Dbxref=NCBI_GP:WJG98471.1;Name=WJG98471.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=PUW34_08930;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WJG98471.1;transl_table=11 CP118122.1 Genbank gene 1819259 1822315 . - . ID=gene-PUW34_08935;Name=PUW34_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08935 CP118122.1 Protein Homology CDS 1819259 1822315 . - 0 ID=cds-WJG98472.1;Parent=gene-PUW34_08935;Dbxref=NCBI_GP:WJG98472.1;Name=WJG98472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=PUW34_08935;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WJG98472.1;transl_table=11 CP118122.1 Genbank gene 1822580 1823698 . + . ID=gene-PUW34_08940;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=PUW34_08940 CP118122.1 Protein Homology CDS 1822580 1823698 . + 0 ID=cds-WJG98473.1;Parent=gene-PUW34_08940;Dbxref=NCBI_GP:WJG98473.1;Name=WJG98473.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=PUW34_08940;product=AI-2E family transporter YdiK;protein_id=WJG98473.1;transl_table=11 CP118122.1 Genbank gene 1823881 1823988 . + . ID=gene-PUW34_08945;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=PUW34_08945 CP118122.1 cmsearch antisense_RNA 1823881 1823988 . + . ID=rna-PUW34_08945;Parent=gene-PUW34_08945;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_08945;product=antisense sRNA RprA CP118122.1 cmsearch exon 1823881 1823988 . + . ID=exon-PUW34_08945-1;Parent=rna-PUW34_08945;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_08945;product=antisense sRNA RprA CP118122.1 Genbank gene 1824156 1824515 . + . ID=gene-PUW34_08950;Name=PUW34_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08950 CP118122.1 Protein Homology CDS 1824156 1824515 . + 0 ID=cds-WJG98474.1;Parent=gene-PUW34_08950;Dbxref=NCBI_GP:WJG98474.1;Name=WJG98474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=PUW34_08950;product=YdiL family protein;protein_id=WJG98474.1;transl_table=11 CP118122.1 Genbank gene 1824656 1825867 . + . ID=gene-PUW34_08955;Name=PUW34_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08955 CP118122.1 Protein Homology CDS 1824656 1825867 . + 0 ID=cds-WJG98475.1;Parent=gene-PUW34_08955;Dbxref=NCBI_GP:WJG98475.1;Name=WJG98475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=PUW34_08955;product=MFS transporter;protein_id=WJG98475.1;transl_table=11 CP118122.1 Genbank gene 1826231 1827466 . + . ID=gene-PUW34_08960;Name=PUW34_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08960 CP118122.1 Protein Homology CDS 1826231 1827466 . + 0 ID=cds-WJG98476.1;Parent=gene-PUW34_08960;Dbxref=NCBI_GP:WJG98476.1;Name=WJG98476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=PUW34_08960;product=MFS transporter;protein_id=WJG98476.1;transl_table=11 CP118122.1 Genbank pseudogene 1827533 1828398 . + . ID=gene-PUW34_08965;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=pseudogene;locus_tag=PUW34_08965;pseudo=true CP118122.1 Protein Homology CDS 1827533 1828398 . + 0 ID=cds-PUW34_08965;Parent=gene-PUW34_08965;Note=frameshifted;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=PUW34_08965;product=quinate/shikimate dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1828443 1829201 . + . ID=gene-PUW34_08970;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=PUW34_08970 CP118122.1 Protein Homology CDS 1828443 1829201 . + 0 ID=cds-WJG98477.1;Parent=gene-PUW34_08970;Dbxref=NCBI_GP:WJG98477.1;Name=WJG98477.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=PUW34_08970;product=type I 3-dehydroquinate dehydratase;protein_id=WJG98477.1;transl_table=11 CP118122.1 Genbank gene 1829355 1830950 . + . ID=gene-PUW34_08975;Name=PUW34_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08975 CP118122.1 Protein Homology CDS 1829355 1830950 . + 0 ID=cds-WJG98478.1;Parent=gene-PUW34_08975;Dbxref=NCBI_GP:WJG98478.1;Name=WJG98478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=PUW34_08975;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WJG98478.1;transl_table=11 CP118122.1 Genbank gene 1830964 1832115 . + . ID=gene-PUW34_08980;Name=PUW34_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08980 CP118122.1 Protein Homology CDS 1830964 1832115 . + 0 ID=cds-WJG98479.1;Parent=gene-PUW34_08980;Dbxref=NCBI_GP:WJG98479.1;Name=WJG98479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=PUW34_08980;product=acyl-CoA dehydrogenase;protein_id=WJG98479.1;transl_table=11 CP118122.1 Genbank gene 1832191 1833081 . - . ID=gene-PUW34_08985;Name=PUW34_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08985 CP118122.1 Protein Homology CDS 1832191 1833081 . - 0 ID=cds-WJG98480.1;Parent=gene-PUW34_08985;Dbxref=NCBI_GP:WJG98480.1;Name=WJG98480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=PUW34_08985;product=AraC family transcriptional regulator;protein_id=WJG98480.1;transl_table=11 CP118122.1 Genbank pseudogene 1833544 1834308 . + . ID=gene-PUW34_08990;Name=PUW34_08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_08990;pseudo=true CP118122.1 Protein Homology CDS 1833544 1834308 . + 0 ID=cds-PUW34_08990;Parent=gene-PUW34_08990;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=PUW34_08990;product=electron transfer flavoprotein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1834330 1835265 . + . ID=gene-PUW34_08995;Name=PUW34_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_08995 CP118122.1 Protein Homology CDS 1834330 1835265 . + 0 ID=cds-WJG98481.1;Parent=gene-PUW34_08995;Dbxref=NCBI_GP:WJG98481.1;Name=WJG98481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=PUW34_08995;product=electron transfer flavoprotein subunit alpha;protein_id=WJG98481.1;transl_table=11 CP118122.1 Genbank gene 1835322 1836605 . + . ID=gene-PUW34_09000;Name=PUW34_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09000 CP118122.1 Protein Homology CDS 1835322 1836605 . + 0 ID=cds-WJG98482.1;Parent=gene-PUW34_09000;Dbxref=NCBI_GP:WJG98482.1;Name=WJG98482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=PUW34_09000;product=FAD-dependent oxidoreductase;protein_id=WJG98482.1;transl_table=11 CP118122.1 Genbank gene 1836602 1836895 . + . ID=gene-PUW34_09005;Name=PUW34_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09005 CP118122.1 Protein Homology CDS 1836602 1836895 . + 0 ID=cds-WJG98483.1;Parent=gene-PUW34_09005;Dbxref=NCBI_GP:WJG98483.1;Name=WJG98483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=PUW34_09005;product=ferredoxin family protein;protein_id=WJG98483.1;transl_table=11 CP118122.1 Genbank gene 1837133 1838773 . + . ID=gene-PUW34_09010;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=PUW34_09010 CP118122.1 Protein Homology CDS 1837133 1838773 . + 0 ID=cds-WJG98484.1;Parent=gene-PUW34_09010;Dbxref=NCBI_GP:WJG98484.1;Name=WJG98484.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=PUW34_09010;product=medium-chain fatty-acid--CoA ligase;protein_id=WJG98484.1;transl_table=11 CP118122.1 Genbank gene 1838815 1841193 . - . ID=gene-PUW34_09015;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=PUW34_09015 CP118122.1 Protein Homology CDS 1838815 1841193 . - 0 ID=cds-WJG98485.1;Parent=gene-PUW34_09015;Dbxref=NCBI_GP:WJG98485.1;Name=WJG98485.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=PUW34_09015;product=phosphoenolpyruvate synthase;protein_id=WJG98485.1;transl_table=11 CP118122.1 Genbank gene 1841529 1842362 . + . ID=gene-PUW34_09020;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=PUW34_09020 CP118122.1 Protein Homology CDS 1841529 1842362 . + 0 ID=cds-WJG98486.1;Parent=gene-PUW34_09020;Dbxref=NCBI_GP:WJG98486.1;Name=WJG98486.1;gbkey=CDS;gene=ppsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=PUW34_09020;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WJG98486.1;transl_table=11 CP118122.1 Genbank gene 1842518 1843564 . + . ID=gene-PUW34_09025;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=PUW34_09025 CP118122.1 Protein Homology CDS 1842518 1843564 . + 0 ID=cds-WJG98487.1;Parent=gene-PUW34_09025;Dbxref=NCBI_GP:WJG98487.1;Name=WJG98487.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=PUW34_09025;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WJG98487.1;transl_table=11 CP118122.1 Genbank gene 1843721 1843912 . + . ID=gene-PUW34_09030;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=PUW34_09030 CP118122.1 Protein Homology CDS 1843721 1843912 . + 0 ID=cds-WJG98959.1;Parent=gene-PUW34_09030;Dbxref=NCBI_GP:WJG98959.1;Name=WJG98959.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=PUW34_09030;product=hemin uptake protein HemP;protein_id=WJG98959.1;transl_table=11 CP118122.1 Genbank pseudogene 1843947 1845381 . - . ID=gene-PUW34_09035;Name=selO;gbkey=Gene;gene=selO;gene_biotype=pseudogene;locus_tag=PUW34_09035;pseudo=true CP118122.1 Protein Homology CDS 1843947 1845381 . - 0 ID=cds-PUW34_09035;Parent=gene-PUW34_09035;Note=frameshifted;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,protein adenylyltransferase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=PUW34_09035;product=protein adenylyltransferase SelO;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1845432 1846145 . - . ID=gene-PUW34_09040;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=PUW34_09040 CP118122.1 Protein Homology CDS 1845432 1846145 . - 0 ID=cds-WJG98488.1;Parent=gene-PUW34_09040;Dbxref=NCBI_GP:WJG98488.1;Name=WJG98488.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=PUW34_09040;product=anti-FlhDC factor YdiV;protein_id=WJG98488.1;transl_table=11 CP118122.1 Genbank gene 1846459 1846923 . - . ID=gene-PUW34_09045;Name=PUW34_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09045 CP118122.1 Protein Homology CDS 1846459 1846923 . - 0 ID=cds-WJG98489.1;Parent=gene-PUW34_09045;Dbxref=NCBI_GP:WJG98489.1;Name=WJG98489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=PUW34_09045;product=NlpC/P60 family protein;protein_id=WJG98489.1;transl_table=11 CP118122.1 Genbank gene 1847000 1847749 . - . ID=gene-PUW34_09050;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=PUW34_09050 CP118122.1 Protein Homology CDS 1847000 1847749 . - 0 ID=cds-WJG98490.1;Parent=gene-PUW34_09050;Dbxref=NCBI_GP:WJG98490.1;Name=WJG98490.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=PUW34_09050;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WJG98490.1;transl_table=11 CP118122.1 Genbank pseudogene 1847749 1848299 . - . ID=gene-PUW34_09055;Name=PUW34_09055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09055;pseudo=true CP118122.1 Protein Homology CDS 1847749 1848299 . - 0 ID=cds-PUW34_09055;Parent=gene-PUW34_09055;Note=frameshifted;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=PUW34_09055;product=glutathione peroxidase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1848391 1849371 . - . ID=gene-PUW34_09060;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=PUW34_09060 CP118122.1 Protein Homology CDS 1848391 1849371 . - 0 ID=cds-WJG98491.1;Parent=gene-PUW34_09060;Dbxref=NCBI_GP:WJG98491.1;Name=WJG98491.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=PUW34_09060;product=vitamin B12 ABC transporter permease BtuC;protein_id=WJG98491.1;transl_table=11 CP118122.1 Genbank gene 1849574 1849873 . - . ID=gene-PUW34_09065;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=PUW34_09065 CP118122.1 Protein Homology CDS 1849574 1849873 . - 0 ID=cds-WJG98492.1;Parent=gene-PUW34_09065;Dbxref=NCBI_GP:WJG98492.1;Name=WJG98492.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=PUW34_09065;product=integration host factor subunit alpha;protein_id=WJG98492.1;transl_table=11 CP118122.1 Genbank gene 1849878 1852265 . - . ID=gene-PUW34_09070;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=PUW34_09070 CP118122.1 Protein Homology CDS 1849878 1852265 . - 0 ID=cds-WJG98493.1;Parent=gene-PUW34_09070;Dbxref=NCBI_GP:WJG98493.1;Name=WJG98493.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=PUW34_09070;product=phenylalanine--tRNA ligase subunit beta;protein_id=WJG98493.1;transl_table=11 CP118122.1 Genbank gene 1852281 1853264 . - . ID=gene-PUW34_09075;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=PUW34_09075 CP118122.1 Protein Homology CDS 1852281 1853264 . - 0 ID=cds-WJG98494.1;Parent=gene-PUW34_09075;Dbxref=NCBI_GP:WJG98494.1;Name=WJG98494.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=PUW34_09075;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WJG98494.1;transl_table=11 CP118122.1 cmsearch sequence_feature 1853327 1853450 . - . ID=id-CP118122.1:1853327..1853450;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118122.1 Genbank gene 1853401 1853445 . - . ID=gene-PUW34_09080;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=PUW34_09080 CP118122.1 Protein Homology CDS 1853401 1853445 . - 0 ID=cds-WJG98960.1;Parent=gene-PUW34_09080;Dbxref=NCBI_GP:WJG98960.1;Name=WJG98960.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=PUW34_09080;product=pheST operon leader peptide PheM;protein_id=WJG98960.1;transl_table=11 CP118122.1 Genbank gene 1853566 1853922 . - . ID=gene-PUW34_09085;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=PUW34_09085 CP118122.1 Protein Homology CDS 1853566 1853922 . - 0 ID=cds-WJG98495.1;Parent=gene-PUW34_09085;Dbxref=NCBI_GP:WJG98495.1;Name=WJG98495.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=PUW34_09085;product=50S ribosomal protein L20;protein_id=WJG98495.1;transl_table=11 CP118122.1 Genbank gene 1853973 1854170 . - . ID=gene-PUW34_09090;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=PUW34_09090 CP118122.1 Protein Homology CDS 1853973 1854170 . - 0 ID=cds-WJG98496.1;Parent=gene-PUW34_09090;Dbxref=NCBI_GP:WJG98496.1;Name=WJG98496.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=PUW34_09090;product=50S ribosomal protein L35;protein_id=WJG98496.1;transl_table=11 CP118122.1 Genbank gene 1854266 1854808 . - . ID=gene-PUW34_09095;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=PUW34_09095 CP118122.1 Protein Homology CDS 1854266 1854808 . - 0 ID=cds-WJG98961.1;Parent=gene-PUW34_09095;Dbxref=NCBI_GP:WJG98961.1;Name=WJG98961.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=PUW34_09095;product=translation initiation factor IF-3;protein_id=WJG98961.1;transl_table=11 CP118122.1 Genbank gene 1854812 1856740 . - . ID=gene-PUW34_09100;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=PUW34_09100 CP118122.1 Protein Homology CDS 1854812 1856740 . - 0 ID=cds-WJG98497.1;Parent=gene-PUW34_09100;Dbxref=NCBI_GP:WJG98497.1;Name=WJG98497.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=PUW34_09100;product=threonine--tRNA ligase;protein_id=WJG98497.1;transl_table=11 CP118122.1 Genbank gene 1857652 1858875 . + . ID=gene-PUW34_09105;Name=PUW34_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09105 CP118122.1 Protein Homology CDS 1857652 1858875 . + 0 ID=cds-WJG98498.1;Parent=gene-PUW34_09105;Dbxref=NCBI_GP:WJG98498.1;Name=WJG98498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=PUW34_09105;product=O-antigen polymerase;protein_id=WJG98498.1;transl_table=11 CP118122.1 Genbank pseudogene 1859182 1859387 . - . ID=gene-PUW34_09110;Name=PUW34_09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09110;pseudo=true CP118122.1 Protein Homology CDS 1859182 1859387 . - 0 ID=cds-PUW34_09110;Parent=gene-PUW34_09110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=PUW34_09110;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1859560 1860414 . - . ID=gene-PUW34_09115;Name=PUW34_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09115 CP118122.1 Protein Homology CDS 1859560 1860414 . - 0 ID=cds-WJG98499.1;Parent=gene-PUW34_09115;Dbxref=NCBI_GP:WJG98499.1;Name=WJG98499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=PUW34_09115;product=DNA/RNA non-specific endonuclease;protein_id=WJG98499.1;transl_table=11 CP118122.1 Genbank pseudogene 1860435 1860724 . - . ID=gene-PUW34_09120;Name=PUW34_09120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09120;pseudo=true CP118122.1 Protein Homology CDS 1860435 1860724 . - 0 ID=cds-PUW34_09120;Parent=gene-PUW34_09120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=PUW34_09120;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1860867 1861826 . + . ID=gene-PUW34_09125;Name=PUW34_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09125 CP118122.1 Protein Homology CDS 1860867 1861826 . + 0 ID=cds-WJG98500.1;Parent=gene-PUW34_09125;Dbxref=NCBI_GP:WJG98500.1;Name=WJG98500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=PUW34_09125;product=lipid A deacylase LpxR family protein;protein_id=WJG98500.1;transl_table=11 CP118122.1 Genbank gene 1861875 1862633 . - . ID=gene-PUW34_09130;Name=PUW34_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09130 CP118122.1 Protein Homology CDS 1861875 1862633 . - 0 ID=cds-WJG98501.1;Parent=gene-PUW34_09130;Dbxref=NCBI_GP:WJG98501.1;Name=WJG98501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=PUW34_09130;product=YdiY family protein;protein_id=WJG98501.1;transl_table=11 CP118122.1 Genbank gene 1862922 1863854 . + . ID=gene-PUW34_09135;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=PUW34_09135 CP118122.1 Protein Homology CDS 1862922 1863854 . + 0 ID=cds-WJG98502.1;Parent=gene-PUW34_09135;Dbxref=NCBI_GP:WJG98502.1;Name=WJG98502.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=PUW34_09135;product=6-phosphofructokinase II;protein_id=WJG98502.1;transl_table=11 CP118122.1 Genbank gene 1863950 1864240 . + . ID=gene-PUW34_09140;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=PUW34_09140 CP118122.1 Protein Homology CDS 1863950 1864240 . + 0 ID=cds-WJG98503.1;Parent=gene-PUW34_09140;Dbxref=NCBI_GP:WJG98503.1;Name=WJG98503.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=PUW34_09140;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WJG98503.1;transl_table=11 CP118122.1 Genbank gene 1864347 1865207 . + . ID=gene-PUW34_09145;Name=PUW34_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09145 CP118122.1 Protein Homology CDS 1864347 1865207 . + 0 ID=cds-WJG98504.1;Parent=gene-PUW34_09145;Dbxref=NCBI_GP:WJG98504.1;Name=WJG98504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=PUW34_09145;product=fructosamine kinase family protein;protein_id=WJG98504.1;transl_table=11 CP118122.1 Genbank gene 1865250 1865786 . - . ID=gene-PUW34_09150;Name=PUW34_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09150 CP118122.1 Protein Homology CDS 1865250 1865786 . - 0 ID=cds-WJG98505.1;Parent=gene-PUW34_09150;Dbxref=NCBI_GP:WJG98505.1;Name=WJG98505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=PUW34_09150;product=YniB family protein;protein_id=WJG98505.1;transl_table=11 CP118122.1 Genbank gene 1865935 1866603 . + . ID=gene-PUW34_09155;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=PUW34_09155 CP118122.1 Protein Homology CDS 1865935 1866603 . + 0 ID=cds-WJG98506.1;Parent=gene-PUW34_09155;Dbxref=NCBI_GP:WJG98506.1;Name=WJG98506.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=PUW34_09155;product=hexitol phosphatase HxpB;protein_id=WJG98506.1;transl_table=11 CP118122.1 Genbank gene 1866741 1867340 . + . ID=gene-PUW34_09160;Name=PUW34_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09160 CP118122.1 Protein Homology CDS 1866741 1867340 . + 0 ID=cds-WJG98507.1;Parent=gene-PUW34_09160;Dbxref=NCBI_GP:WJG98507.1;Name=WJG98507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=PUW34_09160;product=metal-dependent hydrolase;protein_id=WJG98507.1;transl_table=11 CP118122.1 Genbank gene 1867477 1868868 . + . ID=gene-PUW34_09165;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=PUW34_09165 CP118122.1 Protein Homology CDS 1867477 1868868 . + 0 ID=cds-WJG98508.1;Parent=gene-PUW34_09165;Dbxref=NCBI_GP:WJG98508.1;Name=WJG98508.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=PUW34_09165;product=cystine/sulfocysteine:cation symporter;protein_id=WJG98508.1;transl_table=11 CP118122.1 Genbank gene 1868971 1869213 . - . ID=gene-PUW34_09170;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=PUW34_09170 CP118122.1 Protein Homology CDS 1868971 1869213 . - 0 ID=cds-WJG98509.1;Parent=gene-PUW34_09170;Dbxref=NCBI_GP:WJG98509.1;Name=WJG98509.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=PUW34_09170;product=cell division activator CedA;protein_id=WJG98509.1;transl_table=11 CP118122.1 Genbank gene 1869578 1871830 . + . ID=gene-PUW34_09175;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=PUW34_09175 CP118122.1 Protein Homology CDS 1869578 1871830 . + 0 ID=cds-WJG98510.1;Parent=gene-PUW34_09175;Dbxref=NCBI_GP:WJG98510.1;Name=WJG98510.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=PUW34_09175;product=catalase HPII;protein_id=WJG98510.1;transl_table=11 CP118122.1 Genbank gene 1871874 1872632 . - . ID=gene-PUW34_09180;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=PUW34_09180 CP118122.1 Protein Homology CDS 1871874 1872632 . - 0 ID=cds-WJG98511.1;Parent=gene-PUW34_09180;Dbxref=NCBI_GP:WJG98511.1;Name=WJG98511.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=PUW34_09180;product=chitin disaccharide deacetylase;protein_id=WJG98511.1;transl_table=11 CP118122.1 Genbank gene 1872645 1874000 . - . ID=gene-PUW34_09185;Name=PUW34_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09185 CP118122.1 Protein Homology CDS 1872645 1874000 . - 0 ID=cds-WJG98512.1;Parent=gene-PUW34_09185;Dbxref=NCBI_GP:WJG98512.1;Name=WJG98512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=PUW34_09185;product=6-phospho-beta-glucosidase;protein_id=WJG98512.1;transl_table=11 CP118122.1 Genbank gene 1874125 1874967 . - . ID=gene-PUW34_09190;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=PUW34_09190 CP118122.1 Protein Homology CDS 1874125 1874967 . - 0 ID=cds-WJG98513.1;Parent=gene-PUW34_09190;Dbxref=NCBI_GP:WJG98513.1;Name=WJG98513.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=PUW34_09190;product=transcriptional regulator ChbR;protein_id=WJG98513.1;transl_table=11 CP118122.1 Genbank gene 1874978 1875325 . - . ID=gene-PUW34_09195;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=PUW34_09195 CP118122.1 Protein Homology CDS 1874978 1875325 . - 0 ID=cds-WJG98514.1;Parent=gene-PUW34_09195;Dbxref=NCBI_GP:WJG98514.1;Name=WJG98514.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=PUW34_09195;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WJG98514.1;transl_table=11 CP118122.1 Genbank gene 1875376 1876734 . - . ID=gene-PUW34_09200;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=PUW34_09200 CP118122.1 Protein Homology CDS 1875376 1876734 . - 0 ID=cds-WJG98515.1;Parent=gene-PUW34_09200;Dbxref=NCBI_GP:WJG98515.1;Name=WJG98515.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=PUW34_09200;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WJG98515.1;transl_table=11 CP118122.1 Genbank gene 1876817 1877137 . - . ID=gene-PUW34_09205;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=PUW34_09205 CP118122.1 Protein Homology CDS 1876817 1877137 . - 0 ID=cds-WJG98516.1;Parent=gene-PUW34_09205;Dbxref=NCBI_GP:WJG98516.1;Name=WJG98516.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=PUW34_09205;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WJG98516.1;transl_table=11 CP118122.1 Genbank gene 1877438 1877779 . - . ID=gene-PUW34_09210;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=PUW34_09210 CP118122.1 Protein Homology CDS 1877438 1877779 . - 0 ID=cds-WJG98517.1;Parent=gene-PUW34_09210;Dbxref=NCBI_GP:WJG98517.1;Name=WJG98517.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=PUW34_09210;product=osmotically-inducible lipoprotein OsmE;protein_id=WJG98517.1;transl_table=11 CP118122.1 Genbank gene 1877998 1878825 . + . ID=gene-PUW34_09215;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=PUW34_09215 CP118122.1 Protein Homology CDS 1877998 1878825 . + 0 ID=cds-WJG98518.1;Parent=gene-PUW34_09215;Dbxref=NCBI_GP:WJG98518.1;Name=WJG98518.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=PUW34_09215;product=ammonia-dependent NAD(+) synthetase;protein_id=WJG98518.1;transl_table=11 CP118122.1 Genbank gene 1878946 1879827 . + . ID=gene-PUW34_09220;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=PUW34_09220 CP118122.1 Protein Homology CDS 1878946 1879827 . + 0 ID=cds-WJG98519.1;Parent=gene-PUW34_09220;Dbxref=NCBI_GP:WJG98519.1;Name=WJG98519.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=PUW34_09220;product=excinuclease Cho;protein_id=WJG98519.1;transl_table=11 CP118122.1 Genbank gene 1879902 1880387 . - . ID=gene-PUW34_09225;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=PUW34_09225 CP118122.1 Protein Homology CDS 1879902 1880387 . - 0 ID=cds-WJG98520.1;Parent=gene-PUW34_09225;Dbxref=NCBI_GP:WJG98520.1;Name=WJG98520.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=PUW34_09225;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WJG98520.1;transl_table=11 CP118122.1 Genbank gene 1880723 1881691 . - . ID=gene-PUW34_09230;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=PUW34_09230 CP118122.1 Protein Homology CDS 1880723 1881691 . - 0 ID=cds-WJG98521.1;Parent=gene-PUW34_09230;Dbxref=NCBI_GP:WJG98521.1;Name=WJG98521.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=PUW34_09230;product=succinylglutamate desuccinylase;protein_id=WJG98521.1;transl_table=11 CP118122.1 Genbank gene 1881684 1883027 . - . ID=gene-PUW34_09235;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=PUW34_09235 CP118122.1 Protein Homology CDS 1881684 1883027 . - 0 ID=cds-WJG98522.1;Parent=gene-PUW34_09235;Dbxref=NCBI_GP:WJG98522.1;Name=WJG98522.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=PUW34_09235;product=N-succinylarginine dihydrolase;protein_id=WJG98522.1;transl_table=11 CP118122.1 Genbank gene 1883024 1884502 . - . ID=gene-PUW34_09240;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=PUW34_09240 CP118122.1 Protein Homology CDS 1883024 1884502 . - 0 ID=cds-WJG98523.1;Parent=gene-PUW34_09240;Dbxref=NCBI_GP:WJG98523.1;Name=WJG98523.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=PUW34_09240;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WJG98523.1;transl_table=11 CP118122.1 Genbank pseudogene 1884499 1884927 . - . ID=gene-PUW34_09245;Name=PUW34_09245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09245;pseudo=true CP118122.1 Protein Homology CDS 1884499 1884927 . - 0 ID=cds-PUW34_09245;Parent=gene-PUW34_09245;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=PUW34_09245;product=arginine N-succinyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1884951 1886177 . - . ID=gene-PUW34_09250;Name=PUW34_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09250 CP118122.1 Protein Homology CDS 1884951 1886177 . - 0 ID=cds-WJG98524.1;Parent=gene-PUW34_09250;Dbxref=NCBI_GP:WJG98524.1;Name=WJG98524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=PUW34_09250;product=aspartate aminotransferase family protein;protein_id=WJG98524.1;transl_table=11 CP118122.1 Genbank gene 1886623 1887429 . + . ID=gene-PUW34_09255;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=PUW34_09255 CP118122.1 Protein Homology CDS 1886623 1887429 . + 0 ID=cds-WJG98525.1;Parent=gene-PUW34_09255;Dbxref=NCBI_GP:WJG98525.1;Name=WJG98525.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=PUW34_09255;product=exodeoxyribonuclease III;protein_id=WJG98525.1;transl_table=11 CP118122.1 Genbank gene 1887502 1887918 . + . ID=gene-PUW34_09260;Name=PUW34_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09260 CP118122.1 Protein Homology CDS 1887502 1887918 . + 0 ID=cds-WJG98526.1;Parent=gene-PUW34_09260;Dbxref=NCBI_GP:WJG98526.1;Name=WJG98526.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=PUW34_09260;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WJG98526.1;transl_table=11 CP118122.1 Genbank gene 1887878 1888153 . - . ID=gene-PUW34_09265;Name=PUW34_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09265 CP118122.1 Protein Homology CDS 1887878 1888153 . - 0 ID=cds-WJG98527.1;Parent=gene-PUW34_09265;Dbxref=NCBI_GP:WJG98527.1;Name=WJG98527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=PUW34_09265;product=YnjH family protein;protein_id=WJG98527.1;transl_table=11 CP118122.1 Genbank pseudogene 1888392 1889735 . + . ID=gene-PUW34_09270;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=pseudogene;locus_tag=PUW34_09270;pseudo=true CP118122.1 Protein Homology CDS 1888392 1889735 . + 0 ID=cds-PUW34_09270;Parent=gene-PUW34_09270;Note=internal stop;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=PUW34_09270;product=NADP-specific glutamate dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1889765 1891713 . - . ID=gene-PUW34_09275;Name=topB;gbkey=Gene;gene=topB;gene_biotype=pseudogene;locus_tag=PUW34_09275;pseudo=true CP118122.1 Protein Homology CDS 1889765 1891713 . - 0 ID=cds-PUW34_09275;Parent=gene-PUW34_09275;Note=frameshifted;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=PUW34_09275;product=DNA topoisomerase III;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1891718 1892761 . - . ID=gene-PUW34_09280;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=PUW34_09280 CP118122.1 Protein Homology CDS 1891718 1892761 . - 0 ID=cds-WJG98528.1;Parent=gene-PUW34_09280;Dbxref=NCBI_GP:WJG98528.1;Name=WJG98528.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=PUW34_09280;product=selenide%2C water dikinase SelD;protein_id=WJG98528.1;transl_table=11 CP118122.1 Genbank gene 1892879 1893430 . - . ID=gene-PUW34_09285;Name=PUW34_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09285 CP118122.1 Protein Homology CDS 1892879 1893430 . - 0 ID=cds-WJG98529.1;Parent=gene-PUW34_09285;Dbxref=NCBI_GP:WJG98529.1;Name=WJG98529.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=PUW34_09285;product=NAD(P)H nitroreductase;protein_id=WJG98529.1;transl_table=11 CP118122.1 Genbank gene 1893604 1895460 . + . ID=gene-PUW34_09290;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=PUW34_09290 CP118122.1 Protein Homology CDS 1893604 1895460 . + 0 ID=cds-WJG98530.1;Parent=gene-PUW34_09290;Dbxref=NCBI_GP:WJG98530.1;Name=WJG98530.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=PUW34_09290;product=signal peptide peptidase SppA;protein_id=WJG98530.1;transl_table=11 CP118122.1 Genbank gene 1895556 1896572 . + . ID=gene-PUW34_09295;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=PUW34_09295 CP118122.1 Protein Homology CDS 1895556 1896572 . + 0 ID=cds-WJG98531.1;Parent=gene-PUW34_09295;Dbxref=NCBI_GP:WJG98531.1;Name=WJG98531.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=PUW34_09295;product=asparaginase;protein_id=WJG98531.1;transl_table=11 CP118122.1 Genbank gene 1896599 1897255 . + . ID=gene-PUW34_09300;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=PUW34_09300 CP118122.1 Protein Homology CDS 1896599 1897255 . + 0 ID=cds-WJG98532.1;Parent=gene-PUW34_09300;Dbxref=NCBI_GP:WJG98532.1;Name=WJG98532.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=PUW34_09300;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WJG98532.1;transl_table=11 CP118122.1 Genbank gene 1897358 1897759 . - . ID=gene-PUW34_09305;Name=PUW34_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09305 CP118122.1 Protein Homology CDS 1897358 1897759 . - 0 ID=cds-WJG98962.1;Parent=gene-PUW34_09305;Dbxref=NCBI_GP:WJG98962.1;Name=WJG98962.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=PUW34_09305;product=MFS transporter;protein_id=WJG98962.1;transl_table=11 CP118122.1 Genbank gene 1897702 1898715 . - . ID=gene-PUW34_09310;Name=PUW34_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09310 CP118122.1 Protein Homology CDS 1897702 1898715 . - 0 ID=cds-WJG98533.1;Parent=gene-PUW34_09310;Dbxref=NCBI_GP:WJG98533.1;Name=WJG98533.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PUW34_09310;product=MFS transporter;protein_id=WJG98533.1;transl_table=11 CP118122.1 Genbank gene 1898851 1899609 . - . ID=gene-PUW34_09315;Name=PUW34_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09315 CP118122.1 Protein Homology CDS 1898851 1899609 . - 0 ID=cds-WJG98534.1;Parent=gene-PUW34_09315;Dbxref=NCBI_GP:WJG98534.1;Name=WJG98534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=PUW34_09315;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG98534.1;transl_table=11 CP118122.1 Genbank gene 1899739 1900722 . - . ID=gene-PUW34_09320;Name=PUW34_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09320 CP118122.1 Protein Homology CDS 1899739 1900722 . - 0 ID=cds-WJG98535.1;Parent=gene-PUW34_09320;Dbxref=NCBI_GP:WJG98535.1;Name=WJG98535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=PUW34_09320;product=aldo/keto reductase;protein_id=WJG98535.1;transl_table=11 CP118122.1 Genbank pseudogene 1900732 1901678 . - . ID=gene-PUW34_09325;Name=PUW34_09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09325;pseudo=true CP118122.1 Protein Homology CDS 1900732 1901678 . - 0 ID=cds-PUW34_09325;Parent=gene-PUW34_09325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226390.1;locus_tag=PUW34_09325;product=sugar kinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1901683 1902519 . - . ID=gene-PUW34_09330;Name=PUW34_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09330 CP118122.1 Protein Homology CDS 1901683 1902519 . - 0 ID=cds-WJG98536.1;Parent=gene-PUW34_09330;Dbxref=NCBI_GP:WJG98536.1;Name=WJG98536.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=PUW34_09330;product=ketose-bisphosphate aldolase;protein_id=WJG98536.1;transl_table=11 CP118122.1 Genbank pseudogene 1902541 1903585 . - . ID=gene-PUW34_09335;Name=PUW34_09335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09335;pseudo=true CP118122.1 Protein Homology CDS 1902541 1903585 . - 0 ID=cds-PUW34_09335;Parent=gene-PUW34_09335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=PUW34_09335;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1903596 1904975 . - . ID=gene-PUW34_09340;Name=PUW34_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09340 CP118122.1 Protein Homology CDS 1903596 1904975 . - 0 ID=cds-WJG98537.1;Parent=gene-PUW34_09340;Dbxref=NCBI_GP:WJG98537.1;Name=WJG98537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=PUW34_09340;product=MFS transporter;protein_id=WJG98537.1;transl_table=11 CP118122.1 Genbank gene 1905002 1906078 . - . ID=gene-PUW34_09345;Name=PUW34_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09345 CP118122.1 Protein Homology CDS 1905002 1906078 . - 0 ID=cds-WJG98538.1;Parent=gene-PUW34_09345;Dbxref=NCBI_GP:WJG98538.1;Name=WJG98538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=PUW34_09345;product=zinc-binding dehydrogenase;protein_id=WJG98538.1;transl_table=11 CP118122.1 Genbank pseudogene 1906374 1906796 . + . ID=gene-PUW34_09350;Name=PUW34_09350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09350;pseudo=true CP118122.1 Protein Homology CDS 1906374 1906796 . + 0 ID=cds-PUW34_09350;Parent=gene-PUW34_09350;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892855.1;locus_tag=PUW34_09350;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1906972 1907250 . - . ID=gene-PUW34_09355;Name=PUW34_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09355 CP118122.1 Protein Homology CDS 1906972 1907250 . - 0 ID=cds-WJG98539.1;Parent=gene-PUW34_09355;Dbxref=NCBI_GP:WJG98539.1;Name=WJG98539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=PUW34_09355;product=YeaC family protein;protein_id=WJG98539.1;transl_table=11 CP118122.1 Genbank gene 1907292 1907705 . - . ID=gene-PUW34_09360;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=PUW34_09360 CP118122.1 Protein Homology CDS 1907292 1907705 . - 0 ID=cds-WJG98540.1;Parent=gene-PUW34_09360;Dbxref=NCBI_GP:WJG98540.1;Name=WJG98540.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=PUW34_09360;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WJG98540.1;transl_table=11 CP118122.1 Genbank gene 1908047 1909042 . + . ID=gene-PUW34_09365;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=PUW34_09365 CP118122.1 Protein Homology CDS 1908047 1909042 . + 0 ID=cds-WJG98541.1;Parent=gene-PUW34_09365;Dbxref=NCBI_GP:WJG98541.1;Name=WJG98541.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=PUW34_09365;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WJG98541.1;transl_table=11 CP118122.1 Genbank gene 1909371 1910255 . + . ID=gene-PUW34_09370;Name=PUW34_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09370 CP118122.1 Protein Homology CDS 1909371 1910255 . + 0 ID=cds-WJG98542.1;Parent=gene-PUW34_09370;Dbxref=NCBI_GP:WJG98542.1;Name=WJG98542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=PUW34_09370;product=D-hexose-6-phosphate mutarotase;protein_id=WJG98542.1;transl_table=11 CP118122.1 Genbank gene 1910354 1911211 . - . ID=gene-PUW34_09375;Name=PUW34_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09375 CP118122.1 Protein Homology CDS 1910354 1911211 . - 0 ID=cds-WJG98963.1;Parent=gene-PUW34_09375;Dbxref=NCBI_GP:WJG98963.1;Name=WJG98963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=PUW34_09375;product=aldo/keto reductase;protein_id=WJG98963.1;transl_table=11 CP118122.1 Genbank pseudogene 1911308 1912504 . - . ID=gene-PUW34_09380;Name=PUW34_09380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09380;pseudo=true CP118122.1 Protein Homology CDS 1911308 1912504 . - 0 ID=cds-PUW34_09380;Parent=gene-PUW34_09380;Note=frameshifted;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=PUW34_09380;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 1912733 1912978 . + . ID=gene-PUW34_09385;Name=PUW34_09385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09385;pseudo=true CP118122.1 Protein Homology CDS 1912733 1912978 . + 0 ID=cds-PUW34_09385;Parent=gene-PUW34_09385;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=PUW34_09385;product=diguanylate cyclase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1913028 1913546 . + . ID=gene-PUW34_09390;Name=PUW34_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09390 CP118122.1 Protein Homology CDS 1913028 1913546 . + 0 ID=cds-WJG98964.1;Parent=gene-PUW34_09390;Dbxref=NCBI_GP:WJG98964.1;Name=WJG98964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=PUW34_09390;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WJG98964.1;transl_table=11 CP118122.1 Genbank gene 1913543 1913650 . - . ID=gene-PUW34_09395;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=PUW34_09395 CP118122.1 Protein Homology CDS 1913543 1913650 . - 0 ID=cds-WJG98543.1;Parent=gene-PUW34_09395;Dbxref=NCBI_GP:WJG98543.1;Name=WJG98543.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=PUW34_09395;product=small membrane protein YoaI;protein_id=WJG98543.1;transl_table=11 CP118122.1 Genbank gene 1913856 1914302 . + . ID=gene-PUW34_09400;Name=PUW34_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09400 CP118122.1 Protein Homology CDS 1913856 1914302 . + 0 ID=cds-WJG98544.1;Parent=gene-PUW34_09400;Dbxref=NCBI_GP:WJG98544.1;Name=WJG98544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=PUW34_09400;product=DUF441 domain-containing protein;protein_id=WJG98544.1;transl_table=11 CP118122.1 Genbank gene 1914282 1915076 . - . ID=gene-PUW34_09405;Name=PUW34_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09405 CP118122.1 Protein Homology CDS 1914282 1915076 . - 0 ID=cds-WJG98545.1;Parent=gene-PUW34_09405;Dbxref=NCBI_GP:WJG98545.1;Name=WJG98545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=PUW34_09405;product=helix-turn-helix transcriptional regulator;protein_id=WJG98545.1;transl_table=11 CP118122.1 Genbank gene 1915177 1916361 . + . ID=gene-PUW34_09410;Name=PUW34_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09410 CP118122.1 Protein Homology CDS 1915177 1916361 . + 0 ID=cds-WJG98546.1;Parent=gene-PUW34_09410;Dbxref=NCBI_GP:WJG98546.1;Name=WJG98546.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=PUW34_09410;product=CynX/NimT family MFS transporter;protein_id=WJG98546.1;transl_table=11 CP118122.1 Genbank gene 1916480 1916827 . + . ID=gene-PUW34_09415;Name=PUW34_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09415 CP118122.1 Protein Homology CDS 1916480 1916827 . + 0 ID=cds-WJG98547.1;Parent=gene-PUW34_09415;Dbxref=NCBI_GP:WJG98547.1;Name=WJG98547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=PUW34_09415;product=DUF488 domain-containing protein;protein_id=WJG98547.1;transl_table=11 CP118122.1 Genbank gene 1916813 1917124 . - . ID=gene-PUW34_09420;Name=PUW34_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09420 CP118122.1 Protein Homology CDS 1916813 1917124 . - 0 ID=cds-WJG98548.1;Parent=gene-PUW34_09420;Dbxref=NCBI_GP:WJG98548.1;Name=WJG98548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=PUW34_09420;product=hypothetical protein;protein_id=WJG98548.1;transl_table=11 CP118122.1 Genbank gene 1917193 1917444 . - . ID=gene-PUW34_09425;Name=PUW34_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09425 CP118122.1 Protein Homology CDS 1917193 1917444 . - 0 ID=cds-WJG98549.1;Parent=gene-PUW34_09425;Dbxref=NCBI_GP:WJG98549.1;Name=WJG98549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=PUW34_09425;product=DUF333 domain-containing protein;protein_id=WJG98549.1;transl_table=11 CP118122.1 Genbank gene 1917640 1917738 . + . ID=gene-PUW34_09430;Name=PUW34_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09430 CP118122.1 Protein Homology CDS 1917640 1917738 . + 0 ID=cds-WJG98550.1;Parent=gene-PUW34_09430;Dbxref=NCBI_GP:WJG98550.1;Name=WJG98550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=PUW34_09430;product=YoaK family small membrane protein;protein_id=WJG98550.1;transl_table=11 CP118122.1 Genbank gene 1917877 1918125 . - . ID=gene-PUW34_09435;Name=PUW34_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09435 CP118122.1 Protein Homology CDS 1917877 1918125 . - 0 ID=cds-WJG98551.1;Parent=gene-PUW34_09435;Dbxref=NCBI_GP:WJG98551.1;Name=WJG98551.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=PUW34_09435;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WJG98551.1;transl_table=11 CP118122.1 Genbank gene 1918439 1919080 . - . ID=gene-PUW34_09440;Name=PUW34_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09440 CP118122.1 Protein Homology CDS 1918439 1919080 . - 0 ID=cds-WJG98552.1;Parent=gene-PUW34_09440;Dbxref=NCBI_GP:WJG98552.1;Name=WJG98552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=PUW34_09440;product=hypothetical protein;protein_id=WJG98552.1;transl_table=11 CP118122.1 Genbank gene 1919310 1919492 . - . ID=gene-PUW34_09445;Name=PUW34_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09445 CP118122.1 Protein Homology CDS 1919310 1919492 . - 0 ID=cds-WJG98553.1;Parent=gene-PUW34_09445;Dbxref=NCBI_GP:WJG98553.1;Name=WJG98553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=PUW34_09445;product=DUF1869 domain-containing protein;protein_id=WJG98553.1;transl_table=11 CP118122.1 Genbank gene 1919495 1919857 . - . ID=gene-PUW34_09450;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=PUW34_09450 CP118122.1 Protein Homology CDS 1919495 1919857 . - 0 ID=cds-WJG98554.1;Parent=gene-PUW34_09450;Dbxref=NCBI_GP:WJG98554.1;Name=WJG98554.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=PUW34_09450;product=DUF1971 domain-containing protein YeaR;protein_id=WJG98554.1;transl_table=11 CP118122.1 Genbank gene 1920030 1920668 . - . ID=gene-PUW34_09455;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=PUW34_09455 CP118122.1 Protein Homology CDS 1920030 1920668 . - 0 ID=cds-WJG98555.1;Parent=gene-PUW34_09455;Dbxref=NCBI_GP:WJG98555.1;Name=WJG98555.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=PUW34_09455;product=leucine efflux protein LeuE;protein_id=WJG98555.1;transl_table=11 CP118122.1 Genbank gene 1920865 1921410 . - . ID=gene-PUW34_09460;Name=PUW34_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09460 CP118122.1 Protein Homology CDS 1920865 1921410 . - 0 ID=cds-WJG98556.1;Parent=gene-PUW34_09460;Dbxref=NCBI_GP:WJG98556.1;Name=WJG98556.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=PUW34_09460;product=chorismate mutase;protein_id=WJG98556.1;transl_table=11 CP118122.1 Genbank pseudogene 1921493 1921647 . + . ID=gene-PUW34_09465;Name=PUW34_09465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09465;pseudo=true CP118122.1 Protein Homology CDS 1921493 1921647 . + 0 ID=cds-PUW34_09465;Parent=gene-PUW34_09465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=PUW34_09465;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1921726 1921974 . + . ID=gene-PUW34_09470;Name=PUW34_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09470 CP118122.1 Protein Homology CDS 1921726 1921974 . + 0 ID=cds-WJG98557.1;Parent=gene-PUW34_09470;Dbxref=NCBI_GP:WJG98557.1;Name=WJG98557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=PUW34_09470;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WJG98557.1;transl_table=11 CP118122.1 Genbank gene 1922228 1923076 . - . ID=gene-PUW34_09475;Name=PUW34_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09475 CP118122.1 Protein Homology CDS 1922228 1923076 . - 0 ID=cds-WJG98558.1;Parent=gene-PUW34_09475;Dbxref=NCBI_GP:WJG98558.1;Name=WJG98558.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=PUW34_09475;product=MerR family transcriptional regulator;protein_id=WJG98558.1;transl_table=11 CP118122.1 Genbank gene 1923145 1923738 . - . ID=gene-PUW34_09480;Name=PUW34_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09480 CP118122.1 Protein Homology CDS 1923145 1923738 . - 0 ID=cds-WJG98965.1;Parent=gene-PUW34_09480;Dbxref=NCBI_GP:WJG98965.1;Name=WJG98965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=PUW34_09480;product=helix-turn-helix transcriptional regulator;protein_id=WJG98965.1;transl_table=11 CP118122.1 Genbank gene 1923883 1924671 . - . ID=gene-PUW34_09485;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=PUW34_09485 CP118122.1 Protein Homology CDS 1923883 1924671 . - 0 ID=cds-WJG98559.1;Parent=gene-PUW34_09485;Dbxref=NCBI_GP:WJG98559.1;Name=WJG98559.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=PUW34_09485;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WJG98559.1;transl_table=11 CP118122.1 Genbank pseudogene 1924780 1925426 . - . ID=gene-PUW34_09490;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=pseudogene;locus_tag=PUW34_09490;pseudo=true CP118122.1 Protein Homology CDS 1924780 1925426 . - 0 ID=cds-PUW34_09490;Parent=gene-PUW34_09490;Note=frameshifted;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=PUW34_09490;product=metal-binding protein ZinT;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1925538 1925614 . - . ID=gene-PUW34_09495;Name=PUW34_09495;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_09495 CP118122.1 tRNAscan-SE tRNA 1925538 1925614 . - . ID=rna-PUW34_09495;Parent=gene-PUW34_09495;anticodon=(pos:complement(1925578..1925580));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_09495;product=tRNA-Arg CP118122.1 tRNAscan-SE exon 1925538 1925614 . - . ID=exon-PUW34_09495-1;Parent=rna-PUW34_09495;anticodon=(pos:complement(1925578..1925580));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_09495;product=tRNA-Arg CP118122.1 Genbank gene 1925623 1925949 . - . ID=gene-PUW34_09500;Name=PUW34_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09500 CP118122.1 Protein Homology CDS 1925623 1925949 . - 0 ID=cds-WJG98560.1;Parent=gene-PUW34_09500;Dbxref=NCBI_GP:WJG98560.1;Name=WJG98560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=PUW34_09500;product=four-helix bundle copper-binding protein;protein_id=WJG98560.1;transl_table=11 CP118122.1 Genbank pseudogene 1926143 1927275 . + . ID=gene-PUW34_09505;Name=PUW34_09505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09505;pseudo=true CP118122.1 Protein Homology CDS 1926143 1927275 . + 0 ID=cds-PUW34_09505;Parent=gene-PUW34_09505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=PUW34_09505;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1927356 1927946 . - . ID=gene-PUW34_09510;Name=PUW34_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09510 CP118122.1 Protein Homology CDS 1927356 1927946 . - 0 ID=cds-WJG98561.1;Parent=gene-PUW34_09510;Dbxref=NCBI_GP:WJG98561.1;Name=WJG98561.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=PUW34_09510;product=ATP-binding cassette domain-containing protein;protein_id=WJG98561.1;transl_table=11 CP118122.1 Genbank gene 1927940 1928737 . - . ID=gene-PUW34_09515;Name=PUW34_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09515 CP118122.1 Protein Homology CDS 1927940 1928737 . - 0 ID=cds-WJG98562.1;Parent=gene-PUW34_09515;Dbxref=NCBI_GP:WJG98562.1;Name=WJG98562.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=PUW34_09515;product=ATP-binding cassette domain-containing protein;protein_id=WJG98562.1;transl_table=11 CP118122.1 Genbank gene 1928731 1929543 . - . ID=gene-PUW34_09520;Name=PUW34_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09520 CP118122.1 Protein Homology CDS 1928731 1929543 . - 0 ID=cds-WJG98563.1;Parent=gene-PUW34_09520;Dbxref=NCBI_GP:WJG98563.1;Name=WJG98563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=PUW34_09520;product=ABC transporter permease;protein_id=WJG98563.1;transl_table=11 CP118122.1 Genbank gene 1929533 1930507 . - . ID=gene-PUW34_09525;Name=PUW34_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09525 CP118122.1 Protein Homology CDS 1929533 1930507 . - 0 ID=cds-WJG98966.1;Parent=gene-PUW34_09525;Dbxref=NCBI_GP:WJG98966.1;Name=WJG98966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=PUW34_09525;product=ABC transporter permease;protein_id=WJG98966.1;transl_table=11 CP118122.1 Genbank pseudogene 1930507 1932140 . - . ID=gene-PUW34_09530;Name=PUW34_09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09530;pseudo=true CP118122.1 Protein Homology CDS 1930507 1932140 . - 0 ID=cds-PUW34_09530;Parent=gene-PUW34_09530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=PUW34_09530;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1932822 1933136 . + . ID=gene-PUW34_09535;Name=PUW34_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09535 CP118122.1 Protein Homology CDS 1932822 1933136 . + 0 ID=cds-WJG98564.1;Parent=gene-PUW34_09535;Dbxref=NCBI_GP:WJG98564.1;Name=WJG98564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=PUW34_09535;product=TRL-like family protein;protein_id=WJG98564.1;transl_table=11 CP118122.1 Genbank gene 1933285 1933815 . + . ID=gene-PUW34_09540;Name=PUW34_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09540 CP118122.1 Protein Homology CDS 1933285 1933815 . + 0 ID=cds-WJG98565.1;Parent=gene-PUW34_09540;Dbxref=NCBI_GP:WJG98565.1;Name=WJG98565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=PUW34_09540;product=cytochrome b;protein_id=WJG98565.1;transl_table=11 CP118122.1 Genbank gene 1933898 1934941 . - . ID=gene-PUW34_09545;Name=PUW34_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09545 CP118122.1 Protein Homology CDS 1933898 1934941 . - 0 ID=cds-WJG98566.1;Parent=gene-PUW34_09545;Dbxref=NCBI_GP:WJG98566.1;Name=WJG98566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=PUW34_09545;product=exo-alpha-sialidase;protein_id=WJG98566.1;transl_table=11 CP118122.1 Genbank gene 1935280 1935747 . - . ID=gene-PUW34_09550;Name=PUW34_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09550 CP118122.1 Protein Homology CDS 1935280 1935747 . - 0 ID=cds-WJG98967.1;Parent=gene-PUW34_09550;Dbxref=NCBI_GP:WJG98967.1;Name=WJG98967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=PUW34_09550;product=Hsp20 family protein;protein_id=WJG98967.1;transl_table=11 CP118122.1 Genbank gene 1935900 1936172 . - . ID=gene-PUW34_09555;Name=PUW34_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09555 CP118122.1 Protein Homology CDS 1935900 1936172 . - 0 ID=cds-WJG98567.1;Parent=gene-PUW34_09555;Dbxref=NCBI_GP:WJG98567.1;Name=WJG98567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=PUW34_09555;product=hypothetical protein;protein_id=WJG98567.1;transl_table=11 CP118122.1 Genbank gene 1936874 1937218 . + . ID=gene-PUW34_09560;Name=PUW34_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09560 CP118122.1 Protein Homology CDS 1936874 1937218 . + 0 ID=cds-WJG98568.1;Parent=gene-PUW34_09560;Dbxref=NCBI_GP:WJG98568.1;Name=WJG98568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=PUW34_09560;product=c-type lysozyme inhibitor;protein_id=WJG98568.1;transl_table=11 CP118122.1 Genbank gene 1937973 1938049 . - . ID=gene-PUW34_09565;Name=PUW34_09565;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_09565 CP118122.1 tRNAscan-SE tRNA 1937973 1938049 . - . ID=rna-PUW34_09565;Parent=gene-PUW34_09565;anticodon=(pos:complement(1938013..1938015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_09565;product=tRNA-Arg CP118122.1 tRNAscan-SE exon 1937973 1938049 . - . ID=exon-PUW34_09565-1;Parent=rna-PUW34_09565;anticodon=(pos:complement(1938013..1938015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_09565;product=tRNA-Arg CP118122.1 Genbank gene 1938440 1938997 . - . ID=gene-PUW34_09570;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=PUW34_09570 CP118122.1 Protein Homology CDS 1938440 1938997 . - 0 ID=cds-WJG98569.1;Parent=gene-PUW34_09570;Dbxref=NCBI_GP:WJG98569.1;Name=WJG98569.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=PUW34_09570;product=virulence membrane protein PagC;protein_id=WJG98569.1;transl_table=11 CP118122.1 Genbank gene 1939809 1940072 . + . ID=gene-PUW34_09575;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=PUW34_09575 CP118122.1 Protein Homology CDS 1939809 1940072 . + 0 ID=cds-WJG98570.1;Parent=gene-PUW34_09575;Dbxref=NCBI_GP:WJG98570.1;Name=WJG98570.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=PUW34_09575;product=virulence protein PagD;protein_id=WJG98570.1;transl_table=11 CP118122.1 Genbank pseudogene 1940204 1940405 . + . ID=gene-PUW34_09580;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=pseudogene;locus_tag=PUW34_09580;pseudo=true CP118122.1 Protein Homology CDS 1940204 1940405 . + 0 ID=cds-PUW34_09580;Parent=gene-PUW34_09580;Note=frameshifted;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=PUW34_09580;product=cold shock-like protein CspF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1940819 1941340 . + . ID=gene-PUW34_09585;Name=PUW34_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09585 CP118122.1 Protein Homology CDS 1940819 1941340 . + 0 ID=cds-WJG98571.1;Parent=gene-PUW34_09585;Dbxref=NCBI_GP:WJG98571.1;Name=WJG98571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=PUW34_09585;product=RICIN domain-containing protein;protein_id=WJG98571.1;transl_table=11 CP118122.1 Genbank gene 1941531 1941770 . + . ID=gene-PUW34_09590;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=PUW34_09590 CP118122.1 Protein Homology CDS 1941531 1941770 . + 0 ID=cds-WJG98572.1;Parent=gene-PUW34_09590;Dbxref=NCBI_GP:WJG98572.1;Name=WJG98572.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=PUW34_09590;product=virulence protein MsgA;protein_id=WJG98572.1;transl_table=11 CP118122.1 Genbank pseudogene 1942260 1943049 . + . ID=gene-PUW34_09595;Name=PUW34_09595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09595;pseudo=true CP118122.1 Protein Homology CDS 1942260 1943049 . + 0 ID=cds-PUW34_09595;Parent=gene-PUW34_09595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=PUW34_09595;product=lipoprotein EnvF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1944037 1945161 . - . ID=gene-PUW34_09600;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=PUW34_09600 CP118122.1 Protein Homology CDS 1944037 1945161 . - 0 ID=cds-WJG98573.1;Parent=gene-PUW34_09600;Dbxref=NCBI_GP:WJG98573.1;Name=WJG98573.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=PUW34_09600;product=type III secretion system effector SopF;protein_id=WJG98573.1;transl_table=11 CP118122.1 Genbank gene 1945622 1946872 . - . ID=gene-PUW34_09605;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=PUW34_09605 CP118122.1 Protein Homology CDS 1945622 1946872 . - 0 ID=cds-WJG98574.1;Parent=gene-PUW34_09605;Dbxref=NCBI_GP:WJG98574.1;Name=WJG98574.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=PUW34_09605;product=NADP-dependent isocitrate dehydrogenase;protein_id=WJG98574.1;transl_table=11 CP118122.1 Genbank gene 1947044 1947709 . + . ID=gene-PUW34_09610;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=PUW34_09610 CP118122.1 Protein Homology CDS 1947044 1947709 . + 0 ID=cds-WJG98575.1;Parent=gene-PUW34_09610;Dbxref=NCBI_GP:WJG98575.1;Name=WJG98575.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=PUW34_09610;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WJG98575.1;transl_table=11 CP118122.1 Genbank gene 1947706 1948035 . + . ID=gene-PUW34_09615;Name=PUW34_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09615 CP118122.1 Protein Homology CDS 1947706 1948035 . + 0 ID=cds-WJG98576.1;Parent=gene-PUW34_09615;Dbxref=NCBI_GP:WJG98576.1;Name=WJG98576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=PUW34_09615;product=hypothetical protein;protein_id=WJG98576.1;transl_table=11 CP118122.1 Genbank gene 1948047 1948508 . + . ID=gene-PUW34_09620;Name=PUW34_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09620 CP118122.1 Protein Homology CDS 1948047 1948508 . + 0 ID=cds-WJG98577.1;Parent=gene-PUW34_09620;Dbxref=NCBI_GP:WJG98577.1;Name=WJG98577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=PUW34_09620;product=NUDIX hydrolase;protein_id=WJG98577.1;transl_table=11 CP118122.1 Genbank gene 1948562 1949668 . + . ID=gene-PUW34_09625;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=PUW34_09625 CP118122.1 Protein Homology CDS 1948562 1949668 . + 0 ID=cds-WJG98578.1;Parent=gene-PUW34_09625;Dbxref=NCBI_GP:WJG98578.1;Name=WJG98578.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=PUW34_09625;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WJG98578.1;transl_table=11 CP118122.1 Genbank gene 1949755 1950396 . + . ID=gene-PUW34_09630;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=PUW34_09630 CP118122.1 Protein Homology CDS 1949755 1950396 . + 0 ID=cds-WJG98579.1;Parent=gene-PUW34_09630;Dbxref=NCBI_GP:WJG98579.1;Name=WJG98579.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=PUW34_09630;product=high frequency lysogenization protein HflD;protein_id=WJG98579.1;transl_table=11 CP118122.1 Genbank gene 1950400 1951770 . + . ID=gene-PUW34_09635;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=PUW34_09635 CP118122.1 Protein Homology CDS 1950400 1951770 . + 0 ID=cds-WJG98580.1;Parent=gene-PUW34_09635;Dbxref=NCBI_GP:WJG98580.1;Name=WJG98580.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=PUW34_09635;product=adenylosuccinate lyase;protein_id=WJG98580.1;transl_table=11 CP118122.1 Genbank gene 1951897 1952568 . + . ID=gene-PUW34_09640;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=PUW34_09640 CP118122.1 Protein Homology CDS 1951897 1952568 . + 0 ID=cds-WJG98968.1;Parent=gene-PUW34_09640;Dbxref=NCBI_GP:WJG98968.1;Name=WJG98968.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=PUW34_09640;product=two-component system response regulator PhoP;protein_id=WJG98968.1;transl_table=11 CP118122.1 Genbank pseudogene 1952568 1954030 . + . ID=gene-PUW34_09645;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=pseudogene;locus_tag=PUW34_09645;pseudo=true CP118122.1 Protein Homology CDS 1952568 1954030 . + 0 ID=cds-PUW34_09645;Parent=gene-PUW34_09645;Note=frameshifted;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=PUW34_09645;product=two-component system sensor histidine kinase PhoQ;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1954111 1955232 . + . ID=gene-PUW34_09650;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=PUW34_09650 CP118122.1 Protein Homology CDS 1954111 1955232 . + 0 ID=cds-WJG98581.1;Parent=gene-PUW34_09650;Dbxref=NCBI_GP:WJG98581.1;Name=WJG98581.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=PUW34_09650;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WJG98581.1;transl_table=11 CP118122.1 Genbank gene 1955272 1956606 . - . ID=gene-PUW34_09655;Name=PUW34_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09655 CP118122.1 Protein Homology CDS 1955272 1956606 . - 0 ID=cds-WJG98582.1;Parent=gene-PUW34_09655;Dbxref=NCBI_GP:WJG98582.1;Name=WJG98582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=PUW34_09655;product=hypothetical protein;protein_id=WJG98582.1;transl_table=11 CP118122.1 Genbank gene 1956610 1957839 . - . ID=gene-PUW34_09660;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=PUW34_09660 CP118122.1 Protein Homology CDS 1956610 1957839 . - 0 ID=cds-WJG98583.1;Parent=gene-PUW34_09660;Dbxref=NCBI_GP:WJG98583.1;Name=WJG98583.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=PUW34_09660;product=peptidase T;protein_id=WJG98583.1;transl_table=11 CP118122.1 Genbank gene 1958090 1959226 . + . ID=gene-PUW34_09665;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=PUW34_09665 CP118122.1 Protein Homology CDS 1958090 1959226 . + 0 ID=cds-WJG98584.1;Parent=gene-PUW34_09665;Dbxref=NCBI_GP:WJG98584.1;Name=WJG98584.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=PUW34_09665;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WJG98584.1;transl_table=11 CP118122.1 Genbank gene 1959210 1960073 . + . ID=gene-PUW34_09670;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=PUW34_09670 CP118122.1 Protein Homology CDS 1959210 1960073 . + 0 ID=cds-WJG98585.1;Parent=gene-PUW34_09670;Dbxref=NCBI_GP:WJG98585.1;Name=WJG98585.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=PUW34_09670;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WJG98585.1;transl_table=11 CP118122.1 Genbank gene 1960402 1961412 . + . ID=gene-PUW34_09675;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=PUW34_09675 CP118122.1 Protein Homology CDS 1960402 1961412 . + 0 ID=cds-WJG98586.1;Parent=gene-PUW34_09675;Dbxref=NCBI_GP:WJG98586.1;Name=WJG98586.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=PUW34_09675;product=SPI-2 type III secretion system effector SifA;protein_id=WJG98586.1;transl_table=11 CP118122.1 Genbank gene 1961503 1961673 . + . ID=gene-PUW34_09680;Name=PUW34_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09680 CP118122.1 GeneMarkS-2+ CDS 1961503 1961673 . + 0 ID=cds-WJG98587.1;Parent=gene-PUW34_09680;Dbxref=NCBI_GP:WJG98587.1;Name=WJG98587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_09680;product=hypothetical protein;protein_id=WJG98587.1;transl_table=11 CP118122.1 Genbank gene 1961729 1962508 . + . ID=gene-PUW34_09685;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=PUW34_09685 CP118122.1 Protein Homology CDS 1961729 1962508 . + 0 ID=cds-WJG98588.1;Parent=gene-PUW34_09685;Dbxref=NCBI_GP:WJG98588.1;Name=WJG98588.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=PUW34_09685;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WJG98588.1;transl_table=11 CP118122.1 Genbank gene 1962533 1963579 . + . ID=gene-PUW34_09690;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=PUW34_09690 CP118122.1 Protein Homology CDS 1962533 1963579 . + 0 ID=cds-WJG98589.1;Parent=gene-PUW34_09690;Dbxref=NCBI_GP:WJG98589.1;Name=WJG98589.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=PUW34_09690;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WJG98589.1;transl_table=11 CP118122.1 Genbank gene 1963661 1964482 . - . ID=gene-PUW34_09695;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=PUW34_09695 CP118122.1 Protein Homology CDS 1963661 1964482 . - 0 ID=cds-WJG98590.1;Parent=gene-PUW34_09695;Dbxref=NCBI_GP:WJG98590.1;Name=WJG98590.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=PUW34_09695;product=NAD-dependent protein deacylase;protein_id=WJG98590.1;transl_table=11 CP118122.1 Genbank gene 1964501 1965412 . - . ID=gene-PUW34_09700;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=PUW34_09700 CP118122.1 Protein Homology CDS 1964501 1965412 . - 0 ID=cds-WJG98591.1;Parent=gene-PUW34_09700;Dbxref=NCBI_GP:WJG98591.1;Name=WJG98591.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=PUW34_09700;product=N-acetylglucosamine kinase;protein_id=WJG98591.1;transl_table=11 CP118122.1 Genbank gene 1965441 1966685 . - . ID=gene-PUW34_09705;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=PUW34_09705 CP118122.1 Protein Homology CDS 1965441 1966685 . - 0 ID=cds-WJG98592.1;Parent=gene-PUW34_09705;Dbxref=NCBI_GP:WJG98592.1;Name=WJG98592.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=PUW34_09705;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WJG98592.1;transl_table=11 CP118122.1 Genbank gene 1966685 1967386 . - . ID=gene-PUW34_09710;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=PUW34_09710 CP118122.1 Protein Homology CDS 1966685 1967386 . - 0 ID=cds-WJG98593.1;Parent=gene-PUW34_09710;Dbxref=NCBI_GP:WJG98593.1;Name=WJG98593.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=PUW34_09710;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WJG98593.1;transl_table=11 CP118122.1 Genbank gene 1967379 1968578 . - . ID=gene-PUW34_09715;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=PUW34_09715 CP118122.1 Protein Homology CDS 1967379 1968578 . - 0 ID=cds-WJG98594.1;Parent=gene-PUW34_09715;Dbxref=NCBI_GP:WJG98594.1;Name=WJG98594.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=PUW34_09715;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WJG98594.1;transl_table=11 CP118122.1 Genbank gene 1968916 1972362 . + . ID=gene-PUW34_09720;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=PUW34_09720 CP118122.1 Protein Homology CDS 1968916 1972362 . + 0 ID=cds-WJG98595.1;Parent=gene-PUW34_09720;Dbxref=NCBI_GP:WJG98595.1;Name=WJG98595.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=PUW34_09720;product=transcription-repair coupling factor;protein_id=WJG98595.1;transl_table=11 CP118122.1 Genbank pseudogene 1972510 1973474 . + . ID=gene-PUW34_09725;Name=PUW34_09725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09725;pseudo=true CP118122.1 Protein Homology CDS 1972510 1973474 . + 0 ID=cds-PUW34_09725;Parent=gene-PUW34_09725;Note=frameshifted;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=PUW34_09725;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1973571 1973828 . - . ID=gene-PUW34_09730;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ycfR;locus_tag=PUW34_09730 CP118122.1 Protein Homology CDS 1973571 1973828 . - 0 ID=cds-WJG98596.1;Parent=gene-PUW34_09730;Dbxref=NCBI_GP:WJG98596.1;Name=WJG98596.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=PUW34_09730;product=multiple stress resistance protein BhsA;protein_id=WJG98596.1;transl_table=11 CP118122.1 Genbank gene 1974070 1974705 . + . ID=gene-PUW34_09735;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=PUW34_09735 CP118122.1 Protein Homology CDS 1974070 1974705 . + 0 ID=cds-WJG98597.1;Parent=gene-PUW34_09735;Dbxref=NCBI_GP:WJG98597.1;Name=WJG98597.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=PUW34_09735;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WJG98597.1;transl_table=11 CP118122.1 Genbank pseudogene 1974779 1975295 . - . ID=gene-PUW34_09740;Name=PUW34_09740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09740;pseudo=true CP118122.1 Protein Homology CDS 1974779 1975295 . - 0 ID=cds-PUW34_09740;Parent=gene-PUW34_09740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=PUW34_09740;product=glycine zipper 2TM domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 1975474 1976778 . - . ID=gene-PUW34_09745;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=PUW34_09745 CP118122.1 Protein Homology CDS 1975474 1976778 . - 0 ID=cds-WJG98598.1;Parent=gene-PUW34_09745;Dbxref=NCBI_GP:WJG98598.1;Name=WJG98598.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=PUW34_09745;product=NADH-quinone dehydrogenase;protein_id=WJG98598.1;transl_table=11 CP118122.1 Genbank gene 1977033 1977575 . - . ID=gene-PUW34_09750;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=PUW34_09750 CP118122.1 Protein Homology CDS 1977033 1977575 . - 0 ID=cds-WJG98599.1;Parent=gene-PUW34_09750;Dbxref=NCBI_GP:WJG98599.1;Name=WJG98599.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=PUW34_09750;product=alpha/beta hydrolase YcfP;protein_id=WJG98599.1;transl_table=11 CP118122.1 Genbank gene 1977600 1978625 . - . ID=gene-PUW34_09755;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=PUW34_09755 CP118122.1 Protein Homology CDS 1977600 1978625 . - 0 ID=cds-WJG98600.1;Parent=gene-PUW34_09755;Dbxref=NCBI_GP:WJG98600.1;Name=WJG98600.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=PUW34_09755;product=beta-N-acetylhexosaminidase;protein_id=WJG98600.1;transl_table=11 CP118122.1 Genbank gene 1978636 1979460 . - . ID=gene-PUW34_09760;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=PUW34_09760 CP118122.1 Protein Homology CDS 1978636 1979460 . - 0 ID=cds-WJG98601.1;Parent=gene-PUW34_09760;Dbxref=NCBI_GP:WJG98601.1;Name=WJG98601.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=PUW34_09760;product=thiamine kinase;protein_id=WJG98601.1;transl_table=11 CP118122.1 Genbank gene 1979441 1980079 . - . ID=gene-PUW34_09765;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=PUW34_09765 CP118122.1 Protein Homology CDS 1979441 1980079 . - 0 ID=cds-WJG98602.1;Parent=gene-PUW34_09765;Dbxref=NCBI_GP:WJG98602.1;Name=WJG98602.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=PUW34_09765;product=penicillin-binding protein activator LpoB;protein_id=WJG98602.1;transl_table=11 CP118122.1 Genbank gene 1980093 1980467 . - . ID=gene-PUW34_09770;Name=PUW34_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09770 CP118122.1 Protein Homology CDS 1980093 1980467 . - 0 ID=cds-WJG98603.1;Parent=gene-PUW34_09770;Dbxref=NCBI_GP:WJG98603.1;Name=WJG98603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=PUW34_09770;product=YcfL family protein;protein_id=WJG98603.1;transl_table=11 CP118122.1 Genbank gene 1980470 1980829 . - . ID=gene-PUW34_09775;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=PUW34_09775 CP118122.1 Protein Homology CDS 1980470 1980829 . - 0 ID=cds-WJG98604.1;Parent=gene-PUW34_09775;Dbxref=NCBI_GP:WJG98604.1;Name=WJG98604.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=PUW34_09775;product=purine nucleoside phosphoramidase;protein_id=WJG98604.1;transl_table=11 CP118122.1 Genbank gene 1981171 1983345 . + . ID=gene-PUW34_09780;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=PUW34_09780 CP118122.1 Protein Homology CDS 1981171 1983345 . + 0 ID=cds-WJG98605.1;Parent=gene-PUW34_09780;Dbxref=NCBI_GP:WJG98605.1;Name=WJG98605.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=PUW34_09780;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WJG98605.1;transl_table=11 CP118122.1 Genbank gene 1983430 1984863 . - . ID=gene-PUW34_09785;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=PUW34_09785 CP118122.1 Protein Homology CDS 1983430 1984863 . - 0 ID=cds-WJG98606.1;Parent=gene-PUW34_09785;Dbxref=NCBI_GP:WJG98606.1;Name=WJG98606.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=PUW34_09785;product=PTS glucose transporter subunit IIBC;protein_id=WJG98606.1;transl_table=11 CP118122.1 Genbank gene 1985158 1985955 . - . ID=gene-PUW34_09790;Name=PUW34_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09790 CP118122.1 Protein Homology CDS 1985158 1985955 . - 0 ID=cds-WJG98607.1;Parent=gene-PUW34_09790;Dbxref=NCBI_GP:WJG98607.1;Name=WJG98607.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=PUW34_09790;product=metal-dependent hydrolase;protein_id=WJG98607.1;transl_table=11 CP118122.1 Genbank gene 1985966 1986970 . - . ID=gene-PUW34_09795;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=PUW34_09795 CP118122.1 Protein Homology CDS 1985966 1986970 . - 0 ID=cds-WJG98608.1;Parent=gene-PUW34_09795;Dbxref=NCBI_GP:WJG98608.1;Name=WJG98608.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=PUW34_09795;product=DNA polymerase III subunit delta';protein_id=WJG98608.1;transl_table=11 CP118122.1 Genbank gene 1986967 1987608 . - . ID=gene-PUW34_09800;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=PUW34_09800 CP118122.1 Protein Homology CDS 1986967 1987608 . - 0 ID=cds-WJG98609.1;Parent=gene-PUW34_09800;Dbxref=NCBI_GP:WJG98609.1;Name=WJG98609.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=PUW34_09800;product=dTMP kinase;protein_id=WJG98609.1;transl_table=11 CP118122.1 Genbank gene 1987598 1988620 . - . ID=gene-PUW34_09805;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=PUW34_09805 CP118122.1 Protein Homology CDS 1987598 1988620 . - 0 ID=cds-WJG98610.1;Parent=gene-PUW34_09805;Dbxref=NCBI_GP:WJG98610.1;Name=WJG98610.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=PUW34_09805;product=cell division protein YceG;protein_id=WJG98610.1;transl_table=11 CP118122.1 Genbank gene 1988623 1989432 . - . ID=gene-PUW34_09810;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=PUW34_09810 CP118122.1 Protein Homology CDS 1988623 1989432 . - 0 ID=cds-WJG98611.1;Parent=gene-PUW34_09810;Dbxref=NCBI_GP:WJG98611.1;Name=WJG98611.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=PUW34_09810;product=aminodeoxychorismate lyase;protein_id=WJG98611.1;transl_table=11 CP118122.1 Genbank gene 1989556 1990797 . - . ID=gene-PUW34_09815;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=PUW34_09815 CP118122.1 Protein Homology CDS 1989556 1990797 . - 0 ID=cds-WJG98612.1;Parent=gene-PUW34_09815;Dbxref=NCBI_GP:WJG98612.1;Name=WJG98612.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=PUW34_09815;product=beta-ketoacyl-ACP synthase II;protein_id=WJG98612.1;transl_table=11 CP118122.1 Genbank gene 1990883 1991119 . - . ID=gene-PUW34_09820;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=PUW34_09820 CP118122.1 Protein Homology CDS 1990883 1991119 . - 0 ID=cds-WJG98613.1;Parent=gene-PUW34_09820;Dbxref=NCBI_GP:WJG98613.1;Name=WJG98613.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=PUW34_09820;product=acyl carrier protein;protein_id=WJG98613.1;transl_table=11 CP118122.1 Genbank gene 1991275 1992009 . - . ID=gene-PUW34_09825;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PUW34_09825 CP118122.1 Protein Homology CDS 1991275 1992009 . - 0 ID=cds-WJG98614.1;Parent=gene-PUW34_09825;Dbxref=NCBI_GP:WJG98614.1;Name=WJG98614.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=PUW34_09825;product=3-oxoacyl-ACP reductase FabG;protein_id=WJG98614.1;transl_table=11 CP118122.1 Genbank gene 1992022 1992951 . - . ID=gene-PUW34_09830;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=PUW34_09830 CP118122.1 Protein Homology CDS 1992022 1992951 . - 0 ID=cds-WJG98615.1;Parent=gene-PUW34_09830;Dbxref=NCBI_GP:WJG98615.1;Name=WJG98615.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=PUW34_09830;product=ACP S-malonyltransferase;protein_id=WJG98615.1;transl_table=11 CP118122.1 Genbank gene 1992967 1993920 . - . ID=gene-PUW34_09835;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=PUW34_09835 CP118122.1 Protein Homology CDS 1992967 1993920 . - 0 ID=cds-WJG98616.1;Parent=gene-PUW34_09835;Dbxref=NCBI_GP:WJG98616.1;Name=WJG98616.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=PUW34_09835;product=beta-ketoacyl-ACP synthase III;protein_id=WJG98616.1;transl_table=11 CP118122.1 Genbank gene 1994000 1995079 . - . ID=gene-PUW34_09840;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=PUW34_09840 CP118122.1 Protein Homology CDS 1994000 1995079 . - 0 ID=cds-WJG98617.1;Parent=gene-PUW34_09840;Dbxref=NCBI_GP:WJG98617.1;Name=WJG98617.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=PUW34_09840;product=phosphate acyltransferase PlsX;protein_id=WJG98617.1;transl_table=11 CP118122.1 Genbank gene 1995213 1995386 . - . ID=gene-PUW34_09845;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=PUW34_09845 CP118122.1 Protein Homology CDS 1995213 1995386 . - 0 ID=cds-WJG98618.1;Parent=gene-PUW34_09845;Dbxref=NCBI_GP:WJG98618.1;Name=WJG98618.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=PUW34_09845;product=50S ribosomal protein L32;protein_id=WJG98618.1;transl_table=11 CP118122.1 Genbank gene 1995438 1995959 . - . ID=gene-PUW34_09850;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=PUW34_09850 CP118122.1 Protein Homology CDS 1995438 1995959 . - 0 ID=cds-WJG98619.1;Parent=gene-PUW34_09850;Dbxref=NCBI_GP:WJG98619.1;Name=WJG98619.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=PUW34_09850;product=23S rRNA accumulation protein YceD;protein_id=WJG98619.1;transl_table=11 CP118122.1 Genbank gene 1996157 1996741 . + . ID=gene-PUW34_09855;Name=PUW34_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09855 CP118122.1 Protein Homology CDS 1996157 1996741 . + 0 ID=cds-WJG98620.1;Parent=gene-PUW34_09855;Dbxref=NCBI_GP:WJG98620.1;Name=WJG98620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=PUW34_09855;product=Maf family protein;protein_id=WJG98620.1;transl_table=11 CP118122.1 Genbank gene 1996812 1997036 . - . ID=gene-PUW34_09860;Name=PUW34_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09860 CP118122.1 GeneMarkS-2+ CDS 1996812 1997036 . - 0 ID=cds-WJG98621.1;Parent=gene-PUW34_09860;Dbxref=NCBI_GP:WJG98621.1;Name=WJG98621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_09860;product=hypothetical protein;protein_id=WJG98621.1;transl_table=11 CP118122.1 Genbank gene 1997239 1997982 . - . ID=gene-PUW34_09865;Name=PUW34_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09865 CP118122.1 Protein Homology CDS 1997239 1997982 . - 0 ID=cds-WJG98969.1;Parent=gene-PUW34_09865;Dbxref=NCBI_GP:WJG98969.1;Name=WJG98969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=PUW34_09865;product=DUF3053 domain-containing protein;protein_id=WJG98969.1;transl_table=11 CP118122.1 Genbank gene 1998138 1999097 . - . ID=gene-PUW34_09870;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=PUW34_09870 CP118122.1 Protein Homology CDS 1998138 1999097 . - 0 ID=cds-WJG98622.1;Parent=gene-PUW34_09870;Dbxref=NCBI_GP:WJG98622.1;Name=WJG98622.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=PUW34_09870;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WJG98622.1;transl_table=11 CP118122.1 Genbank pseudogene 1999671 2002876 . + . ID=gene-PUW34_09875;Name=rne;gbkey=Gene;gene=rne;gene_biotype=pseudogene;locus_tag=PUW34_09875;pseudo=true CP118122.1 Protein Homology CDS 1999671 2002876 . + 0 ID=cds-PUW34_09875;Parent=gene-PUW34_09875;Note=frameshifted;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=PUW34_09875;product=ribonuclease E;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2003123 2004076 . - . ID=gene-PUW34_09880;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=PUW34_09880 CP118122.1 Protein Homology CDS 2003123 2004076 . - 0 ID=cds-WJG98623.1;Parent=gene-PUW34_09880;Dbxref=NCBI_GP:WJG98623.1;Name=WJG98623.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=PUW34_09880;product=flagellar hook-associated protein FlgL;protein_id=WJG98623.1;transl_table=11 CP118122.1 Genbank pseudogene 2004091 2005752 . - . ID=gene-PUW34_09885;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=pseudogene;locus_tag=PUW34_09885;pseudo=true CP118122.1 Protein Homology CDS 2004091 2005752 . - 0 ID=cds-PUW34_09885;Parent=gene-PUW34_09885;Note=internal stop;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=PUW34_09885;product=flagellar hook-associated protein FlgK;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2005817 2006767 . - . ID=gene-PUW34_09890;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=PUW34_09890 CP118122.1 Protein Homology CDS 2005817 2006767 . - 0 ID=cds-WJG98624.1;Parent=gene-PUW34_09890;Dbxref=NCBI_GP:WJG98624.1;Name=WJG98624.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=PUW34_09890;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WJG98624.1;transl_table=11 CP118122.1 Genbank pseudogene 2006767 2007864 . - . ID=gene-PUW34_09895;Name=PUW34_09895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09895;pseudo=true CP118122.1 Protein Homology CDS 2006767 2007864 . - 0 ID=cds-PUW34_09895;Parent=gene-PUW34_09895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=PUW34_09895;product=flagellar basal body P-ring protein FlgI;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2007876 2008574 . - . ID=gene-PUW34_09900;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=PUW34_09900 CP118122.1 Protein Homology CDS 2007876 2008574 . - 0 ID=cds-WJG98625.1;Parent=gene-PUW34_09900;Dbxref=NCBI_GP:WJG98625.1;Name=WJG98625.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=PUW34_09900;product=flagellar basal body L-ring protein FlgH;protein_id=WJG98625.1;transl_table=11 CP118122.1 Genbank gene 2008629 2009411 . - . ID=gene-PUW34_09905;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=PUW34_09905 CP118122.1 Protein Homology CDS 2008629 2009411 . - 0 ID=cds-WJG98626.1;Parent=gene-PUW34_09905;Dbxref=NCBI_GP:WJG98626.1;Name=WJG98626.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=PUW34_09905;product=flagellar basal-body rod protein FlgG;protein_id=WJG98626.1;transl_table=11 CP118122.1 Genbank gene 2009425 2010180 . - . ID=gene-PUW34_09910;Name=PUW34_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09910 CP118122.1 Protein Homology CDS 2009425 2010180 . - 0 ID=cds-WJG98627.1;Parent=gene-PUW34_09910;Dbxref=NCBI_GP:WJG98627.1;Name=WJG98627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=PUW34_09910;product=flagellar basal body rod protein FlgF;protein_id=WJG98627.1;transl_table=11 CP118122.1 Genbank gene 2010201 2011412 . - . ID=gene-PUW34_09915;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=PUW34_09915 CP118122.1 Protein Homology CDS 2010201 2011412 . - 0 ID=cds-WJG98628.1;Parent=gene-PUW34_09915;Dbxref=NCBI_GP:WJG98628.1;Name=WJG98628.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=PUW34_09915;product=flagellar hook protein FlgE;protein_id=WJG98628.1;transl_table=11 CP118122.1 Genbank gene 2011439 2012137 . - . ID=gene-PUW34_09920;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=PUW34_09920 CP118122.1 Protein Homology CDS 2011439 2012137 . - 0 ID=cds-WJG98629.1;Parent=gene-PUW34_09920;Dbxref=NCBI_GP:WJG98629.1;Name=WJG98629.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=PUW34_09920;product=flagellar hook assembly protein FlgD;protein_id=WJG98629.1;transl_table=11 CP118122.1 Genbank gene 2012149 2012553 . - . ID=gene-PUW34_09925;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=PUW34_09925 CP118122.1 Protein Homology CDS 2012149 2012553 . - 0 ID=cds-WJG98630.1;Parent=gene-PUW34_09925;Dbxref=NCBI_GP:WJG98630.1;Name=WJG98630.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=PUW34_09925;product=flagellar basal body rod protein FlgC;protein_id=WJG98630.1;transl_table=11 CP118122.1 Genbank gene 2012557 2012973 . - . ID=gene-PUW34_09930;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=PUW34_09930 CP118122.1 Protein Homology CDS 2012557 2012973 . - 0 ID=cds-WJG98631.1;Parent=gene-PUW34_09930;Dbxref=NCBI_GP:WJG98631.1;Name=WJG98631.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=PUW34_09930;product=flagellar basal body rod protein FlgB;protein_id=WJG98631.1;transl_table=11 CP118122.1 Genbank gene 2013130 2013789 . + . ID=gene-PUW34_09935;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=PUW34_09935 CP118122.1 Protein Homology CDS 2013130 2013789 . + 0 ID=cds-WJG98632.1;Parent=gene-PUW34_09935;Dbxref=NCBI_GP:WJG98632.1;Name=WJG98632.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=PUW34_09935;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WJG98632.1;transl_table=11 CP118122.1 Genbank gene 2013881 2014174 . + . ID=gene-PUW34_09940;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=PUW34_09940 CP118122.1 Protein Homology CDS 2013881 2014174 . + 0 ID=cds-WJG98633.1;Parent=gene-PUW34_09940;Dbxref=NCBI_GP:WJG98633.1;Name=WJG98633.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=PUW34_09940;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WJG98633.1;transl_table=11 CP118122.1 Genbank gene 2014179 2014601 . + . ID=gene-PUW34_09945;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=PUW34_09945 CP118122.1 Protein Homology CDS 2014179 2014601 . + 0 ID=cds-WJG98634.1;Parent=gene-PUW34_09945;Dbxref=NCBI_GP:WJG98634.1;Name=WJG98634.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=PUW34_09945;product=flagella biosynthesis chaperone FlgN;protein_id=WJG98634.1;transl_table=11 CP118122.1 Genbank gene 2014683 2016218 . - . ID=gene-PUW34_09950;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=PUW34_09950 CP118122.1 Protein Homology CDS 2014683 2016218 . - 0 ID=cds-WJG98635.1;Parent=gene-PUW34_09950;Dbxref=NCBI_GP:WJG98635.1;Name=WJG98635.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=PUW34_09950;product=murein biosynthesis integral membrane protein MurJ;protein_id=WJG98635.1;transl_table=11 CP118122.1 Genbank gene 2016522 2017445 . - . ID=gene-PUW34_09955;Name=PUW34_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09955 CP118122.1 Protein Homology CDS 2016522 2017445 . - 0 ID=cds-WJG98636.1;Parent=gene-PUW34_09955;Dbxref=NCBI_GP:WJG98636.1;Name=WJG98636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=PUW34_09955;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WJG98636.1;transl_table=11 CP118122.1 Genbank pseudogene 2017447 2018093 . - . ID=gene-PUW34_09960;Name=PUW34_09960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_09960;pseudo=true CP118122.1 Protein Homology CDS 2017447 2018093 . - 0 ID=cds-PUW34_09960;Parent=gene-PUW34_09960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=PUW34_09960;product=YceH family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2018129 2018713 . - . ID=gene-PUW34_09965;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=PUW34_09965 CP118122.1 Protein Homology CDS 2018129 2018713 . - 0 ID=cds-WJG98637.1;Parent=gene-PUW34_09965;Dbxref=NCBI_GP:WJG98637.1;Name=WJG98637.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=PUW34_09965;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WJG98637.1;transl_table=11 CP118122.1 Genbank gene 2018950 2020158 . + . ID=gene-PUW34_09970;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=PUW34_09970 CP118122.1 Protein Homology CDS 2018950 2020158 . + 0 ID=cds-WJG98638.1;Parent=gene-PUW34_09970;Dbxref=NCBI_GP:WJG98638.1;Name=WJG98638.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=PUW34_09970;product=multidrug efflux MFS transporter MdtH;protein_id=WJG98638.1;transl_table=11 CP118122.1 Genbank pseudogene 2020222 2020868 . + . ID=gene-PUW34_09975;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=pseudogene;locus_tag=PUW34_09975;pseudo=true CP118122.1 Protein Homology CDS 2020222 2020868 . + 0 ID=cds-PUW34_09975;Parent=gene-PUW34_09975;Note=frameshifted;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=PUW34_09975;product=glutaredoxin 2;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2020993 2021553 . + . ID=gene-PUW34_09980;Name=PUW34_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_09980 CP118122.1 Protein Homology CDS 2020993 2021553 . + 0 ID=cds-WJG98639.1;Parent=gene-PUW34_09980;Dbxref=NCBI_GP:WJG98639.1;Name=WJG98639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=PUW34_09980;product=lipoprotein;protein_id=WJG98639.1;transl_table=11 CP118122.1 Genbank gene 2021658 2022704 . + . ID=gene-PUW34_09985;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=PUW34_09985 CP118122.1 Protein Homology CDS 2021658 2022704 . + 0 ID=cds-WJG98640.1;Parent=gene-PUW34_09985;Dbxref=NCBI_GP:WJG98640.1;Name=WJG98640.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=PUW34_09985;product=dihydroorotase;protein_id=WJG98640.1;transl_table=11 CP118122.1 Genbank gene 2022778 2023023 . + . ID=gene-PUW34_09990;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=PUW34_09990 CP118122.1 Protein Homology CDS 2022778 2023023 . + 0 ID=cds-WJG98641.1;Parent=gene-PUW34_09990;Dbxref=NCBI_GP:WJG98641.1;Name=WJG98641.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=PUW34_09990;product=DNA damage-inducible protein I;protein_id=WJG98641.1;transl_table=11 CP118122.1 Genbank gene 2023313 2023567 . + . ID=gene-PUW34_09995;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=PUW34_09995 CP118122.1 Protein Homology CDS 2023313 2023567 . + 0 ID=cds-WJG98970.1;Parent=gene-PUW34_09995;Dbxref=NCBI_GP:WJG98970.1;Name=WJG98970.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=PUW34_09995;product=biofilm formation regulator BssS;protein_id=WJG98970.1;transl_table=11 CP118122.1 Genbank gene 2023680 2024798 . + . ID=gene-PUW34_10000;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=PUW34_10000 CP118122.1 Protein Homology CDS 2023680 2024798 . + 0 ID=cds-WJG98642.1;Parent=gene-PUW34_10000;Dbxref=NCBI_GP:WJG98642.1;Name=WJG98642.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=PUW34_10000;product=N-methyl-L-tryptophan oxidase;protein_id=WJG98642.1;transl_table=11 CP118122.1 Genbank gene 2024839 2024952 . + . ID=gene-PUW34_10005;Name=PUW34_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10005 CP118122.1 Protein Homology CDS 2024839 2024952 . + 0 ID=cds-WJG98643.1;Parent=gene-PUW34_10005;Dbxref=NCBI_GP:WJG98643.1;Name=WJG98643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=PUW34_10005;product=YceO family protein;protein_id=WJG98643.1;transl_table=11 CP118122.1 Genbank gene 2025215 2025787 . + . ID=gene-PUW34_10010;Name=PUW34_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10010 CP118122.1 Protein Homology CDS 2025215 2025787 . + 0 ID=cds-WJG98644.1;Parent=gene-PUW34_10010;Dbxref=NCBI_GP:WJG98644.1;Name=WJG98644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=PUW34_10010;product=cytochrome b;protein_id=WJG98644.1;transl_table=11 CP118122.1 Genbank gene 2025784 2026359 . + . ID=gene-PUW34_10015;Name=PUW34_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10015 CP118122.1 Protein Homology CDS 2025784 2026359 . + 0 ID=cds-WJG98645.1;Parent=gene-PUW34_10015;Dbxref=NCBI_GP:WJG98645.1;Name=WJG98645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=PUW34_10015;product=YceI family protein;protein_id=WJG98645.1;transl_table=11 CP118122.1 Genbank gene 2026411 2027463 . - . ID=gene-PUW34_10020;Name=PUW34_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10020 CP118122.1 Protein Homology CDS 2026411 2027463 . - 0 ID=cds-WJG98646.1;Parent=gene-PUW34_10020;Dbxref=NCBI_GP:WJG98646.1;Name=WJG98646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=PUW34_10020;product=rhodanese-related sulfurtransferase;protein_id=WJG98646.1;transl_table=11 CP118122.1 Genbank gene 2027683 2028603 . + . ID=gene-PUW34_10025;Name=PUW34_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10025 CP118122.1 Protein Homology CDS 2027683 2028603 . + 0 ID=cds-WJG98647.1;Parent=gene-PUW34_10025;Dbxref=NCBI_GP:WJG98647.1;Name=WJG98647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=PUW34_10025;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WJG98647.1;transl_table=11 CP118122.1 Genbank gene 2028758 2029972 . + . ID=gene-PUW34_10030;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=PUW34_10030 CP118122.1 Protein Homology CDS 2028758 2029972 . + 0 ID=cds-WJG98648.1;Parent=gene-PUW34_10030;Dbxref=NCBI_GP:WJG98648.1;Name=WJG98648.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=PUW34_10030;product=multidrug efflux MFS transporter MdtG;protein_id=WJG98648.1;transl_table=11 CP118122.1 Genbank gene 2030054 2030428 . + . ID=gene-PUW34_10035;Name=PUW34_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10035 CP118122.1 Protein Homology CDS 2030054 2030428 . + 0 ID=cds-WJG98649.1;Parent=gene-PUW34_10035;Dbxref=NCBI_GP:WJG98649.1;Name=WJG98649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=PUW34_10035;product=MysB family protein;protein_id=WJG98649.1;transl_table=11 CP118122.1 Genbank gene 2030429 2030656 . - . ID=gene-PUW34_10040;Name=PUW34_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10040 CP118122.1 Protein Homology CDS 2030429 2030656 . - 0 ID=cds-WJG98650.1;Parent=gene-PUW34_10040;Dbxref=NCBI_GP:WJG98650.1;Name=WJG98650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=PUW34_10040;product=YceK/YidQ family lipoprotein;protein_id=WJG98650.1;transl_table=11 CP118122.1 Genbank gene 2030730 2033273 . - . ID=gene-PUW34_10045;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=PUW34_10045 CP118122.1 Protein Homology CDS 2030730 2033273 . - 0 ID=cds-WJG98651.1;Parent=gene-PUW34_10045;Dbxref=NCBI_GP:WJG98651.1;Name=WJG98651.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=PUW34_10045;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WJG98651.1;transl_table=11 CP118122.1 Genbank gene 2033266 2034801 . - . ID=gene-PUW34_10050;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=PUW34_10050 CP118122.1 Protein Homology CDS 2033266 2034801 . - 0 ID=cds-WJG98652.1;Parent=gene-PUW34_10050;Dbxref=NCBI_GP:WJG98652.1;Name=WJG98652.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=PUW34_10050;product=glucans biosynthesis protein MdoG;protein_id=WJG98652.1;transl_table=11 CP118122.1 Genbank gene 2035073 2036227 . + . ID=gene-PUW34_10055;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=PUW34_10055 CP118122.1 Protein Homology CDS 2035073 2036227 . + 0 ID=cds-WJG98653.1;Parent=gene-PUW34_10055;Dbxref=NCBI_GP:WJG98653.1;Name=WJG98653.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=PUW34_10055;product=glucans biosynthesis protein MdoC;protein_id=WJG98653.1;transl_table=11 CP118122.1 Genbank gene 2036244 2037731 . - . ID=gene-PUW34_10060;Name=PUW34_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10060 CP118122.1 Protein Homology CDS 2036244 2037731 . - 0 ID=cds-WJG98654.1;Parent=gene-PUW34_10060;Dbxref=NCBI_GP:WJG98654.1;Name=WJG98654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=PUW34_10060;product=phospholipase D family protein;protein_id=WJG98654.1;transl_table=11 CP118122.1 Genbank gene 2037667 2038206 . - . ID=gene-PUW34_10065;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=PUW34_10065 CP118122.1 Protein Homology CDS 2037667 2038206 . - 0 ID=cds-WJG98655.1;Parent=gene-PUW34_10065;Dbxref=NCBI_GP:WJG98655.1;Name=WJG98655.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=PUW34_10065;product=O-acetyl-ADP-ribose deacetylase;protein_id=WJG98655.1;transl_table=11 CP118122.1 Genbank gene 2038293 2038613 . - . ID=gene-PUW34_10070;Name=PUW34_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10070 CP118122.1 Protein Homology CDS 2038293 2038613 . - 0 ID=cds-WJG98656.1;Parent=gene-PUW34_10070;Dbxref=NCBI_GP:WJG98656.1;Name=WJG98656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=PUW34_10070;product=type 1 fimbrial protein;protein_id=WJG98656.1;transl_table=11 CP118122.1 Genbank gene 2038744 2039070 . - . ID=gene-PUW34_10075;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=PUW34_10075 CP118122.1 Protein Homology CDS 2038744 2039070 . - 0 ID=cds-WJG98657.1;Parent=gene-PUW34_10075;Dbxref=NCBI_GP:WJG98657.1;Name=WJG98657.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=PUW34_10075;product=curli assembly chaperone CsgC;protein_id=WJG98657.1;transl_table=11 CP118122.1 Genbank gene 2039132 2039587 . - . ID=gene-PUW34_10080;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=PUW34_10080 CP118122.1 Protein Homology CDS 2039132 2039587 . - 0 ID=cds-WJG98658.1;Parent=gene-PUW34_10080;Dbxref=NCBI_GP:WJG98658.1;Name=WJG98658.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=PUW34_10080;product=curli major subunit CsgA;protein_id=WJG98658.1;transl_table=11 CP118122.1 Genbank gene 2039629 2040084 . - . ID=gene-PUW34_10085;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=PUW34_10085 CP118122.1 Protein Homology CDS 2039629 2040084 . - 0 ID=cds-WJG98659.1;Parent=gene-PUW34_10085;Dbxref=NCBI_GP:WJG98659.1;Name=WJG98659.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=PUW34_10085;product=curli minor subunit CsgB;protein_id=WJG98659.1;transl_table=11 CP118122.1 Genbank gene 2040838 2041488 . + . ID=gene-PUW34_10090;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=PUW34_10090 CP118122.1 Protein Homology CDS 2040838 2041488 . + 0 ID=cds-WJG98660.1;Parent=gene-PUW34_10090;Dbxref=NCBI_GP:WJG98660.1;Name=WJG98660.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=PUW34_10090;product=biofilm master transcriptional regulator CsgD;protein_id=WJG98660.1;transl_table=11 CP118122.1 Genbank gene 2041493 2041888 . + . ID=gene-PUW34_10095;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=PUW34_10095 CP118122.1 Protein Homology CDS 2041493 2041888 . + 0 ID=cds-WJG98661.1;Parent=gene-PUW34_10095;Dbxref=NCBI_GP:WJG98661.1;Name=WJG98661.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=PUW34_10095;product=curli production assembly/transport protein CsgE;protein_id=WJG98661.1;transl_table=11 CP118122.1 Genbank gene 2041915 2042331 . + . ID=gene-PUW34_10100;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=PUW34_10100 CP118122.1 Protein Homology CDS 2041915 2042331 . + 0 ID=cds-WJG98662.1;Parent=gene-PUW34_10100;Dbxref=NCBI_GP:WJG98662.1;Name=WJG98662.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=PUW34_10100;product=curli production assembly/transport protein CsgF;protein_id=WJG98662.1;transl_table=11 CP118122.1 Genbank gene 2042358 2043191 . + . ID=gene-PUW34_10105;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=PUW34_10105 CP118122.1 Protein Homology CDS 2042358 2043191 . + 0 ID=cds-WJG98663.1;Parent=gene-PUW34_10105;Dbxref=NCBI_GP:WJG98663.1;Name=WJG98663.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=PUW34_10105;product=curli production assembly/transport protein CsgG;protein_id=WJG98663.1;transl_table=11 CP118122.1 Genbank gene 2043230 2043712 . - . ID=gene-PUW34_10110;Name=PUW34_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10110 CP118122.1 Protein Homology CDS 2043230 2043712 . - 0 ID=cds-WJG98664.1;Parent=gene-PUW34_10110;Dbxref=NCBI_GP:WJG98664.1;Name=WJG98664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=PUW34_10110;product=DUF1097 domain-containing protein;protein_id=WJG98664.1;transl_table=11 CP118122.1 Genbank pseudogene 2043813 2044310 . - . ID=gene-PUW34_10115;Name=PUW34_10115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10115;pseudo=true CP118122.1 Protein Homology CDS 2043813 2044310 . - 0 ID=cds-PUW34_10115;Parent=gene-PUW34_10115;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=PUW34_10115;product=molecular chaperone;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2044307 2044396 . - . ID=gene-PUW34_10120;Name=PUW34_10120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10120;pseudo=true CP118122.1 Protein Homology CDS 2044307 2044396 . - 0 ID=cds-PUW34_10120;Parent=gene-PUW34_10120;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=PUW34_10120;product=phosphatase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2044481 2045419 . - . ID=gene-PUW34_10125;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=PUW34_10125 CP118122.1 Protein Homology CDS 2044481 2045419 . - 0 ID=cds-WJG98665.1;Parent=gene-PUW34_10125;Dbxref=NCBI_GP:WJG98665.1;Name=WJG98665.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=PUW34_10125;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WJG98665.1;transl_table=11 CP118122.1 Genbank gene 2045655 2045741 . + . ID=gene-PUW34_10130;Name=PUW34_10130;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_10130 CP118122.1 tRNAscan-SE tRNA 2045655 2045741 . + . ID=rna-PUW34_10130;Parent=gene-PUW34_10130;anticodon=(pos:2045689..2045691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10130;product=tRNA-Ser CP118122.1 tRNAscan-SE exon 2045655 2045741 . + . ID=exon-PUW34_10130-1;Parent=rna-PUW34_10130;anticodon=(pos:2045689..2045691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10130;product=tRNA-Ser CP118122.1 Genbank gene 2045791 2045998 . + . ID=gene-PUW34_10135;Name=PUW34_10135;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW34_10135 CP118122.1 cmsearch ncRNA 2045791 2045998 . + . ID=rna-PUW34_10135;Parent=gene-PUW34_10135;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_10135;product=RtT sRNA CP118122.1 cmsearch exon 2045791 2045998 . + . ID=exon-PUW34_10135-1;Parent=rna-PUW34_10135;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_10135;product=RtT sRNA CP118122.1 Genbank pseudogene 2046246 2046344 . + . ID=gene-PUW34_10140;Name=PUW34_10140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10140;pseudo=true CP118122.1 Protein Homology CDS 2046246 2046344 . + 0 ID=cds-PUW34_10140;Parent=gene-PUW34_10140;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=PUW34_10140;product=integrase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2046427 2046543 . + . ID=gene-PUW34_10145;Name=PUW34_10145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10145;pseudo=true CP118122.1 Protein Homology CDS 2046427 2046543 . + 0 ID=cds-PUW34_10145;Parent=gene-PUW34_10145;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=PUW34_10145;product=transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2046749 2047771 . - . ID=gene-PUW34_10150;Name=PUW34_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10150 CP118122.1 Protein Homology CDS 2046749 2047771 . - 0 ID=cds-WJG98971.1;Parent=gene-PUW34_10150;Dbxref=NCBI_GP:WJG98971.1;Name=WJG98971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1;locus_tag=PUW34_10150;product=IS110-like element ISSaen1 family transposase;protein_id=WJG98971.1;transl_table=11 CP118122.1 Genbank pseudogene 2047838 2047972 . + . ID=gene-PUW34_10155;Name=PUW34_10155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10155;pseudo=true CP118122.1 Protein Homology CDS 2047838 2047972 . + 0 ID=cds-PUW34_10155;Parent=gene-PUW34_10155;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=PUW34_10155;product=transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2048233 2049051 . - . ID=gene-PUW34_10160;Name=PUW34_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10160 CP118122.1 Protein Homology CDS 2048233 2049051 . - 0 ID=cds-WJG98666.1;Parent=gene-PUW34_10160;Dbxref=NCBI_GP:WJG98666.1;Name=WJG98666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=PUW34_10160;product=hypothetical protein;protein_id=WJG98666.1;transl_table=11 CP118122.1 Genbank gene 2050066 2050155 . - . ID=gene-PUW34_10165;Name=PUW34_10165;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_10165 CP118122.1 tRNAscan-SE tRNA 2050066 2050155 . - . ID=rna-PUW34_10165;Parent=gene-PUW34_10165;anticodon=(pos:complement(2050119..2050121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10165;product=tRNA-Ser CP118122.1 tRNAscan-SE exon 2050066 2050155 . - . ID=exon-PUW34_10165-1;Parent=rna-PUW34_10165;anticodon=(pos:complement(2050119..2050121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10165;product=tRNA-Ser CP118122.1 Genbank gene 2050244 2051041 . + . ID=gene-PUW34_10170;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=PUW34_10170 CP118122.1 Protein Homology CDS 2050244 2051041 . + 0 ID=cds-WJG98667.1;Parent=gene-PUW34_10170;Dbxref=NCBI_GP:WJG98667.1;Name=WJG98667.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=PUW34_10170;product=DgsA anti-repressor MtfA;protein_id=WJG98667.1;transl_table=11 CP118122.1 Genbank gene 2051142 2051217 . + . ID=gene-PUW34_10175;Name=PUW34_10175;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_10175 CP118122.1 tRNAscan-SE tRNA 2051142 2051217 . + . ID=rna-PUW34_10175;Parent=gene-PUW34_10175;anticodon=(pos:2051175..2051177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10175;product=tRNA-Asn CP118122.1 tRNAscan-SE exon 2051142 2051217 . + . ID=exon-PUW34_10175-1;Parent=rna-PUW34_10175;anticodon=(pos:2051175..2051177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10175;product=tRNA-Asn CP118122.1 Genbank pseudogene 2051385 2051690 . + . ID=gene-PUW34_10180;Name=PUW34_10180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10180;pseudo=true CP118122.1 Protein Homology CDS 2051385 2051690 . + 0 ID=cds-PUW34_10180;Parent=gene-PUW34_10180;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=PUW34_10180;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2052112 2052187 . + . ID=gene-PUW34_10185;Name=PUW34_10185;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_10185 CP118122.1 tRNAscan-SE tRNA 2052112 2052187 . + . ID=rna-PUW34_10185;Parent=gene-PUW34_10185;anticodon=(pos:2052145..2052147);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10185;product=tRNA-Asn CP118122.1 tRNAscan-SE exon 2052112 2052187 . + . ID=exon-PUW34_10185-1;Parent=rna-PUW34_10185;anticodon=(pos:2052145..2052147);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10185;product=tRNA-Asn CP118122.1 Genbank gene 2052367 2053641 . + . ID=gene-PUW34_10190;Name=PUW34_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10190 CP118122.1 Protein Homology CDS 2052367 2053641 . + 0 ID=cds-WJG98668.1;Parent=gene-PUW34_10190;Dbxref=NCBI_GP:WJG98668.1;Name=WJG98668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=PUW34_10190;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WJG98668.1;transl_table=11 CP118122.1 Genbank gene 2053731 2053964 . - . ID=gene-PUW34_10195;Name=PUW34_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10195 CP118122.1 Protein Homology CDS 2053731 2053964 . - 0 ID=cds-WJG98669.1;Parent=gene-PUW34_10195;Dbxref=NCBI_GP:WJG98669.1;Name=WJG98669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747333.1;locus_tag=PUW34_10195;product=hypothetical protein;protein_id=WJG98669.1;transl_table=11 CP118122.1 Genbank gene 2054443 2055279 . - . ID=gene-PUW34_10200;Name=PUW34_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10200 CP118122.1 Protein Homology CDS 2054443 2055279 . - 0 ID=cds-WJG98670.1;Parent=gene-PUW34_10200;Dbxref=NCBI_GP:WJG98670.1;Name=WJG98670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064127.1;locus_tag=PUW34_10200;product=hypothetical protein;protein_id=WJG98670.1;transl_table=11 CP118122.1 Genbank gene 2055301 2055864 . - . ID=gene-PUW34_10205;Name=PUW34_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10205 CP118122.1 Protein Homology CDS 2055301 2055864 . - 0 ID=cds-WJG98671.1;Parent=gene-PUW34_10205;Dbxref=NCBI_GP:WJG98671.1;Name=WJG98671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072670.1;locus_tag=PUW34_10205;product=hypothetical protein;protein_id=WJG98671.1;transl_table=11 CP118122.1 Genbank gene 2056275 2057156 . + . ID=gene-PUW34_10210;Name=PUW34_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10210 CP118122.1 Protein Homology CDS 2056275 2057156 . + 0 ID=cds-WJG98672.1;Parent=gene-PUW34_10210;Dbxref=NCBI_GP:WJG98672.1;Name=WJG98672.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028416.1;locus_tag=PUW34_10210;product=TIR domain-containing protein;protein_id=WJG98672.1;transl_table=11 CP118122.1 Genbank pseudogene 2057384 2057716 . - . ID=gene-PUW34_10215;Name=PUW34_10215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10215;pseudo=true CP118122.1 Protein Homology CDS 2057384 2057716 . - 0 ID=cds-PUW34_10215;Parent=gene-PUW34_10215;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592083.1;locus_tag=PUW34_10215;product=pilus assembly protein PilV;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2057730 2059568 . - . ID=gene-PUW34_10220;Name=PUW34_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10220 CP118122.1 Protein Homology CDS 2057730 2059568 . - 0 ID=cds-WJG98673.1;Parent=gene-PUW34_10220;Dbxref=NCBI_GP:WJG98673.1;Name=WJG98673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127942.1;locus_tag=PUW34_10220;product=tail fiber protein;protein_id=WJG98673.1;transl_table=11 CP118122.1 Genbank gene 2059584 2060045 . - . ID=gene-PUW34_10225;Name=PUW34_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10225 CP118122.1 Protein Homology CDS 2059584 2060045 . - 0 ID=cds-WJG98674.1;Parent=gene-PUW34_10225;Dbxref=NCBI_GP:WJG98674.1;Name=WJG98674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243510.1;locus_tag=PUW34_10225;product=type 4 pilus major pilin;protein_id=WJG98674.1;transl_table=11 CP118122.1 Genbank pseudogene 2060453 2060759 . - . ID=gene-PUW34_10230;Name=PUW34_10230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10230;pseudo=true CP118122.1 Protein Homology CDS 2060453 2060759 . - 0 ID=cds-PUW34_10230;Parent=gene-PUW34_10230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=PUW34_10230;product=conjugal transfer protein TraD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2061396 2062916 . + . ID=gene-PUW34_10235;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=PUW34_10235 CP118122.1 Protein Homology CDS 2061396 2062916 . + 0 ID=cds-WJG98675.1;Parent=gene-PUW34_10235;Dbxref=NCBI_GP:WJG98675.1;Name=WJG98675.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964095.1;locus_tag=PUW34_10235;product=MobQ family relaxase;protein_id=WJG98675.1;transl_table=11 CP118122.1 Genbank gene 2063128 2063829 . - . ID=gene-PUW34_10240;Name=PUW34_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10240 CP118122.1 Protein Homology CDS 2063128 2063829 . - 0 ID=cds-WJG98676.1;Parent=gene-PUW34_10240;Dbxref=NCBI_GP:WJG98676.1;Name=WJG98676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001732467.1;locus_tag=PUW34_10240;product=DUF2971 domain-containing protein;protein_id=WJG98676.1;transl_table=11 CP118122.1 Genbank gene 2064015 2064278 . - . ID=gene-PUW34_10245;Name=PUW34_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10245 CP118122.1 Protein Homology CDS 2064015 2064278 . - 0 ID=cds-WJG98677.1;Parent=gene-PUW34_10245;Dbxref=NCBI_GP:WJG98677.1;Name=WJG98677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764615.1;locus_tag=PUW34_10245;product=hypothetical protein;protein_id=WJG98677.1;transl_table=11 CP118122.1 Genbank gene 2064289 2064819 . - . ID=gene-PUW34_10250;Name=PUW34_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10250 CP118122.1 Protein Homology CDS 2064289 2064819 . - 0 ID=cds-WJG98678.1;Parent=gene-PUW34_10250;Dbxref=NCBI_GP:WJG98678.1;Name=WJG98678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=PUW34_10250;product=lipoprotein;protein_id=WJG98678.1;transl_table=11 CP118122.1 Genbank gene 2065253 2065726 . + . ID=gene-PUW34_10255;Name=PUW34_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10255 CP118122.1 Protein Homology CDS 2065253 2065726 . + 0 ID=cds-WJG98679.1;Parent=gene-PUW34_10255;Dbxref=NCBI_GP:WJG98679.1;Name=WJG98679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351134.1;locus_tag=PUW34_10255;product=DUF4755 domain-containing protein;protein_id=WJG98679.1;transl_table=11 CP118122.1 Genbank gene 2065759 2066136 . + . ID=gene-PUW34_10260;Name=PUW34_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10260 CP118122.1 Protein Homology CDS 2065759 2066136 . + 0 ID=cds-WJG98680.1;Parent=gene-PUW34_10260;Dbxref=NCBI_GP:WJG98680.1;Name=WJG98680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734570.1;locus_tag=PUW34_10260;product=hypothetical protein;protein_id=WJG98680.1;transl_table=11 CP118122.1 Genbank gene 2066214 2067824 . - . ID=gene-PUW34_10265;Name=PUW34_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10265 CP118122.1 Protein Homology CDS 2066214 2067824 . - 0 ID=cds-WJG98681.1;Parent=gene-PUW34_10265;Dbxref=NCBI_GP:WJG98681.1;Name=WJG98681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276246.1;locus_tag=PUW34_10265;product=class I SAM-dependent methyltransferase;protein_id=WJG98681.1;transl_table=11 CP118122.1 Genbank gene 2067876 2068838 . - . ID=gene-PUW34_10270;Name=PUW34_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10270 CP118122.1 Protein Homology CDS 2067876 2068838 . - 0 ID=cds-WJG98682.1;Parent=gene-PUW34_10270;Dbxref=NCBI_GP:WJG98682.1;Name=WJG98682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000399004.1;locus_tag=PUW34_10270;product=hypothetical protein;protein_id=WJG98682.1;transl_table=11 CP118122.1 Genbank gene 2068894 2069280 . - . ID=gene-PUW34_10275;Name=PUW34_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10275 CP118122.1 Protein Homology CDS 2068894 2069280 . - 0 ID=cds-WJG98683.1;Parent=gene-PUW34_10275;Dbxref=NCBI_GP:WJG98683.1;Name=WJG98683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226498.1;locus_tag=PUW34_10275;product=hypothetical protein;protein_id=WJG98683.1;transl_table=11 CP118122.1 Genbank gene 2069365 2069634 . - . ID=gene-PUW34_10280;Name=PUW34_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10280 CP118122.1 Protein Homology CDS 2069365 2069634 . - 0 ID=cds-WJG98684.1;Parent=gene-PUW34_10280;Dbxref=NCBI_GP:WJG98684.1;Name=WJG98684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059618.1;locus_tag=PUW34_10280;product=hypothetical protein;protein_id=WJG98684.1;transl_table=11 CP118122.1 Genbank pseudogene 2070993 2071726 . + . ID=gene-PUW34_10285;Name=PUW34_10285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10285;pseudo=true CP118122.1 Protein Homology CDS 2070993 2071726 . + 0 ID=cds-PUW34_10285;Parent=gene-PUW34_10285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860215.1;locus_tag=PUW34_10285;product=DNA-binding protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2071757 2072548 . + . ID=gene-PUW34_10290;Name=PUW34_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10290 CP118122.1 Protein Homology CDS 2071757 2072548 . + 0 ID=cds-WJG98685.1;Parent=gene-PUW34_10290;Dbxref=NCBI_GP:WJG98685.1;Name=WJG98685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735917.1;locus_tag=PUW34_10290;product=hypothetical protein;protein_id=WJG98685.1;transl_table=11 CP118122.1 Genbank gene 2072634 2073113 . + . ID=gene-PUW34_10295;Name=PUW34_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10295 CP118122.1 Protein Homology CDS 2072634 2073113 . + 0 ID=cds-WJG98686.1;Parent=gene-PUW34_10295;Dbxref=NCBI_GP:WJG98686.1;Name=WJG98686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233373.1;locus_tag=PUW34_10295;product=DUF4756 family protein;protein_id=WJG98686.1;transl_table=11 CP118122.1 Genbank gene 2073274 2073678 . + . ID=gene-PUW34_10300;Name=PUW34_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10300 CP118122.1 Protein Homology CDS 2073274 2073678 . + 0 ID=cds-WJG98687.1;Parent=gene-PUW34_10300;Dbxref=NCBI_GP:WJG98687.1;Name=WJG98687.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=PUW34_10300;product=H-NS family nucleoid-associated regulatory protein;protein_id=WJG98687.1;transl_table=11 CP118122.1 Genbank pseudogene 2073726 2074002 . + . ID=gene-PUW34_10305;Name=PUW34_10305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10305;pseudo=true CP118122.1 Protein Homology CDS 2073726 2074002 . + 0 ID=cds-PUW34_10305;Parent=gene-PUW34_10305;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=PUW34_10305;product=IS481 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2074094 2074642 . - . ID=gene-PUW34_10310;Name=PUW34_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10310 CP118122.1 Protein Homology CDS 2074094 2074642 . - 0 ID=cds-WJG98688.1;Parent=gene-PUW34_10310;Dbxref=NCBI_GP:WJG98688.1;Name=WJG98688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746429.1;locus_tag=PUW34_10310;product=SLATT domain-containing protein;protein_id=WJG98688.1;transl_table=11 CP118122.1 Genbank gene 2074707 2075978 . - . ID=gene-PUW34_10315;Name=PUW34_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10315 CP118122.1 Protein Homology CDS 2074707 2075978 . - 0 ID=cds-WJG98689.1;Parent=gene-PUW34_10315;Dbxref=NCBI_GP:WJG98689.1;Name=WJG98689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102011.1;locus_tag=PUW34_10315;product=nucleotidyltransferase;protein_id=WJG98689.1;transl_table=11 CP118122.1 Genbank gene 2076224 2076520 . - . ID=gene-PUW34_10320;Name=PUW34_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10320 CP118122.1 Protein Homology CDS 2076224 2076520 . - 0 ID=cds-WJG98690.1;Parent=gene-PUW34_10320;Dbxref=NCBI_GP:WJG98690.1;Name=WJG98690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=PUW34_10320;product=hypothetical protein;protein_id=WJG98690.1;transl_table=11 CP118122.1 Genbank gene 2076564 2076854 . - . ID=gene-PUW34_10325;Name=PUW34_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10325 CP118122.1 Protein Homology CDS 2076564 2076854 . - 0 ID=cds-WJG98691.1;Parent=gene-PUW34_10325;Dbxref=NCBI_GP:WJG98691.1;Name=WJG98691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=PUW34_10325;product=hypothetical protein;protein_id=WJG98691.1;transl_table=11 CP118122.1 Genbank gene 2076936 2077154 . - . ID=gene-PUW34_10330;Name=PUW34_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10330 CP118122.1 Protein Homology CDS 2076936 2077154 . - 0 ID=cds-WJG98692.1;Parent=gene-PUW34_10330;Dbxref=NCBI_GP:WJG98692.1;Name=WJG98692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240778.1;locus_tag=PUW34_10330;product=AlpA family transcriptional regulator;protein_id=WJG98692.1;transl_table=11 CP118122.1 Genbank pseudogene 2077305 2078179 . - . ID=gene-PUW34_10335;Name=PUW34_10335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10335;pseudo=true CP118122.1 Protein Homology CDS 2077305 2078179 . - 0 ID=cds-PUW34_10335;Parent=gene-PUW34_10335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166882.1;locus_tag=PUW34_10335;product=DUF6387 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2078722 2079245 . + . ID=gene-PUW34_10340;Name=PUW34_10340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10340;pseudo=true CP118122.1 Protein Homology CDS 2078722 2079245 . + 0 ID=cds-PUW34_10340;Parent=gene-PUW34_10340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=PUW34_10340;product=peptidase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2079725 2080192 . + . ID=gene-PUW34_10345;Name=PUW34_10345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10345;pseudo=true CP118122.1 Protein Homology CDS 2079725 2080192 . + 0 ID=cds-PUW34_10345;Parent=gene-PUW34_10345;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=PUW34_10345;product=phage integrase N-terminal domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2080278 2080556 . + . ID=gene-PUW34_10350;Name=PUW34_10350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10350;pseudo=true CP118122.1 Protein Homology CDS 2080278 2080556 . + 0 ID=cds-PUW34_10350;Parent=gene-PUW34_10350;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=PUW34_10350;product=transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2081240 2082934 . + . ID=gene-PUW34_10355;Name=PUW34_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10355 CP118122.1 Protein Homology CDS 2081240 2082934 . + 0 ID=cds-WJG98972.1;Parent=gene-PUW34_10355;Dbxref=NCBI_GP:WJG98972.1;Name=WJG98972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=PUW34_10355;product=SEL1-like repeat protein;protein_id=WJG98972.1;transl_table=11 CP118122.1 Genbank gene 2082991 2084721 . + . ID=gene-PUW34_10360;Name=PUW34_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10360 CP118122.1 Protein Homology CDS 2082991 2084721 . + 0 ID=cds-WJG98693.1;Parent=gene-PUW34_10360;Dbxref=NCBI_GP:WJG98693.1;Name=WJG98693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=PUW34_10360;product=hypothetical protein;protein_id=WJG98693.1;transl_table=11 CP118122.1 Genbank pseudogene 2084779 2084883 . - . ID=gene-PUW34_10365;Name=PUW34_10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10365;pseudo=true CP118122.1 Protein Homology CDS 2084779 2084883 . - 0 ID=cds-PUW34_10365;Parent=gene-PUW34_10365;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=PUW34_10365;product=DUF520 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2084931 2085104 . + . ID=gene-PUW34_10370;Name=PUW34_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10370 CP118122.1 Protein Homology CDS 2084931 2085104 . + 0 ID=cds-WJG98694.1;Parent=gene-PUW34_10370;Dbxref=NCBI_GP:WJG98694.1;Name=WJG98694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=PUW34_10370;product=hypothetical protein;protein_id=WJG98694.1;transl_table=11 CP118122.1 Genbank pseudogene 2085285 2085383 . + . ID=gene-PUW34_10375;Name=PUW34_10375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10375;pseudo=true CP118122.1 Protein Homology CDS 2085285 2085383 . + 0 ID=cds-PUW34_10375;Parent=gene-PUW34_10375;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885291.1;locus_tag=PUW34_10375;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2085626 2087080 . - . ID=gene-PUW34_10380;Name=PUW34_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10380 CP118122.1 Protein Homology CDS 2085626 2087080 . - 0 ID=cds-WJG98695.1;Parent=gene-PUW34_10380;Dbxref=NCBI_GP:WJG98695.1;Name=WJG98695.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=PUW34_10380;product=AMP nucleosidase;protein_id=WJG98695.1;transl_table=11 CP118122.1 Genbank gene 2087126 2087287 . + . ID=gene-PUW34_10385;Name=PUW34_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10385 CP118122.1 Protein Homology CDS 2087126 2087287 . + 0 ID=cds-WJG98696.1;Parent=gene-PUW34_10385;Dbxref=NCBI_GP:WJG98696.1;Name=WJG98696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=PUW34_10385;product=cytoplasmic protein;protein_id=WJG98696.1;transl_table=11 CP118122.1 Genbank gene 2087276 2087602 . - . ID=gene-PUW34_10390;Name=PUW34_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10390 CP118122.1 Protein Homology CDS 2087276 2087602 . - 0 ID=cds-WJG98697.1;Parent=gene-PUW34_10390;Dbxref=NCBI_GP:WJG98697.1;Name=WJG98697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=PUW34_10390;product=DUF1493 family protein;protein_id=WJG98697.1;transl_table=11 CP118122.1 Genbank pseudogene 2087596 2088059 . - . ID=gene-PUW34_10395;Name=PUW34_10395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10395;pseudo=true CP118122.1 Protein Homology CDS 2087596 2088059 . - 0 ID=cds-PUW34_10395;Parent=gene-PUW34_10395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=PUW34_10395;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2088479 2088554 . - . ID=gene-PUW34_10400;Name=PUW34_10400;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_10400 CP118122.1 tRNAscan-SE tRNA 2088479 2088554 . - . ID=rna-PUW34_10400;Parent=gene-PUW34_10400;anticodon=(pos:complement(2088519..2088521));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10400;product=tRNA-Asn CP118122.1 tRNAscan-SE exon 2088479 2088554 . - . ID=exon-PUW34_10400-1;Parent=rna-PUW34_10400;anticodon=(pos:complement(2088519..2088521));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10400;product=tRNA-Asn CP118122.1 Genbank pseudogene 2088695 2090151 . - . ID=gene-PUW34_10405;Name=PUW34_10405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10405;pseudo=true CP118122.1 Protein Homology CDS 2088695 2090151 . - 0 ID=cds-PUW34_10405;Parent=gene-PUW34_10405;Note=frameshifted;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=PUW34_10405;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2090311 2090386 . + . ID=gene-PUW34_10410;Name=PUW34_10410;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_10410 CP118122.1 tRNAscan-SE tRNA 2090311 2090386 . + . ID=rna-PUW34_10410;Parent=gene-PUW34_10410;anticodon=(pos:2090344..2090346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10410;product=tRNA-Asn CP118122.1 tRNAscan-SE exon 2090311 2090386 . + . ID=exon-PUW34_10410-1;Parent=rna-PUW34_10410;anticodon=(pos:2090344..2090346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_10410;product=tRNA-Asn CP118122.1 Genbank gene 2090612 2091541 . - . ID=gene-PUW34_10415;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=PUW34_10415 CP118122.1 Protein Homology CDS 2090612 2091541 . - 0 ID=cds-WJG98698.1;Parent=gene-PUW34_10415;Dbxref=NCBI_GP:WJG98698.1;Name=WJG98698.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=PUW34_10415;product=L%2CD-transpeptidase;protein_id=WJG98698.1;transl_table=11 CP118122.1 Genbank gene 2091619 2092689 . - . ID=gene-PUW34_10420;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=PUW34_10420 CP118122.1 Protein Homology CDS 2091619 2092689 . - 0 ID=cds-WJG98699.1;Parent=gene-PUW34_10420;Dbxref=NCBI_GP:WJG98699.1;Name=WJG98699.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=PUW34_10420;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WJG98699.1;transl_table=11 CP118122.1 Genbank gene 2092716 2093459 . - . ID=gene-PUW34_10425;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=PUW34_10425 CP118122.1 Protein Homology CDS 2092716 2093459 . - 0 ID=cds-WJG98700.1;Parent=gene-PUW34_10425;Dbxref=NCBI_GP:WJG98700.1;Name=WJG98700.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=PUW34_10425;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WJG98700.1;transl_table=11 CP118122.1 Genbank gene 2093456 2094001 . - . ID=gene-PUW34_10430;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=PUW34_10430 CP118122.1 Protein Homology CDS 2093456 2094001 . - 0 ID=cds-WJG98701.1;Parent=gene-PUW34_10430;Dbxref=NCBI_GP:WJG98701.1;Name=WJG98701.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=PUW34_10430;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WJG98701.1;transl_table=11 CP118122.1 Genbank gene 2093998 2095512 . - . ID=gene-PUW34_10435;Name=PUW34_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10435 CP118122.1 Protein Homology CDS 2093998 2095512 . - 0 ID=cds-WJG98702.1;Parent=gene-PUW34_10435;Dbxref=NCBI_GP:WJG98702.1;Name=WJG98702.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=PUW34_10435;product=cobyric acid synthase;protein_id=WJG98702.1;transl_table=11 CP118122.1 Genbank pseudogene 2095509 2096322 . - . ID=gene-PUW34_10440;Name=PUW34_10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10440;pseudo=true CP118122.1 Protein Homology CDS 2095509 2096322 . - 0 ID=cds-PUW34_10440;Parent=gene-PUW34_10440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=PUW34_10440;product=energy-coupling factor ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2096331 2097008 . - . ID=gene-PUW34_10445;Name=PUW34_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10445 CP118122.1 Protein Homology CDS 2096331 2097008 . - 0 ID=cds-WJG98973.1;Parent=gene-PUW34_10445;Dbxref=NCBI_GP:WJG98973.1;Name=WJG98973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=PUW34_10445;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WJG98973.1;transl_table=11 CP118122.1 Genbank gene 2096995 2097276 . - . ID=gene-PUW34_10450;Name=PUW34_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10450 CP118122.1 Protein Homology CDS 2096995 2097276 . - 0 ID=cds-WJG98703.1;Parent=gene-PUW34_10450;Dbxref=NCBI_GP:WJG98703.1;Name=WJG98703.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=PUW34_10450;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WJG98703.1;transl_table=11 CP118122.1 Genbank gene 2097278 2098015 . - . ID=gene-PUW34_10455;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=PUW34_10455 CP118122.1 Protein Homology CDS 2097278 2098015 . - 0 ID=cds-WJG98704.1;Parent=gene-PUW34_10455;Dbxref=NCBI_GP:WJG98704.1;Name=WJG98704.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cbiM;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=PUW34_10455;product=cobalt ECF transporter S component CbiM;protein_id=WJG98704.1;transl_table=11 CP118122.1 Genbank gene 2098012 2098725 . - . ID=gene-PUW34_10460;Name=PUW34_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10460 CP118122.1 Protein Homology CDS 2098012 2098725 . - 0 ID=cds-WJG98705.1;Parent=gene-PUW34_10460;Dbxref=NCBI_GP:WJG98705.1;Name=WJG98705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=PUW34_10460;product=cobalt-factor II C(20)-methyltransferase;protein_id=WJG98705.1;transl_table=11 CP118122.1 Genbank gene 2098722 2099516 . - . ID=gene-PUW34_10465;Name=PUW34_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10465 CP118122.1 Protein Homology CDS 2098722 2099516 . - 0 ID=cds-WJG98706.1;Parent=gene-PUW34_10465;Dbxref=NCBI_GP:WJG98706.1;Name=WJG98706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=PUW34_10465;product=sirohydrochlorin cobaltochelatase;protein_id=WJG98706.1;transl_table=11 CP118122.1 Genbank gene 2099519 2100310 . - . ID=gene-PUW34_10470;Name=PUW34_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10470 CP118122.1 Protein Homology CDS 2099519 2100310 . - 0 ID=cds-WJG98707.1;Parent=gene-PUW34_10470;Dbxref=NCBI_GP:WJG98707.1;Name=WJG98707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=PUW34_10470;product=cobalt-precorrin-6A reductase;protein_id=WJG98707.1;transl_table=11 CP118122.1 Genbank gene 2100307 2101032 . - . ID=gene-PUW34_10475;Name=PUW34_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10475 CP118122.1 Protein Homology CDS 2100307 2101032 . - 0 ID=cds-WJG98708.1;Parent=gene-PUW34_10475;Dbxref=NCBI_GP:WJG98708.1;Name=WJG98708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=PUW34_10475;product=precorrin-3B C(17)-methyltransferase;protein_id=WJG98708.1;transl_table=11 CP118122.1 Genbank pseudogene 2101032 2102086 . - . ID=gene-PUW34_10480;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=pseudogene;locus_tag=PUW34_10480;pseudo=true CP118122.1 Protein Homology CDS 2101032 2102086 . - 0 ID=cds-PUW34_10480;Parent=gene-PUW34_10480;Note=frameshifted;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=PUW34_10480;product=cobalt-precorrin 5A hydrolase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2102067 2102840 . - . ID=gene-PUW34_10485;Name=PUW34_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10485 CP118122.1 Protein Homology CDS 2102067 2102840 . - 0 ID=cds-WJG98709.1;Parent=gene-PUW34_10485;Dbxref=NCBI_GP:WJG98709.1;Name=WJG98709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=PUW34_10485;product=cobalt-precorrin-4 methyltransferase;protein_id=WJG98709.1;transl_table=11 CP118122.1 Genbank gene 2102824 2103402 . - . ID=gene-PUW34_10490;Name=PUW34_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10490 CP118122.1 Protein Homology CDS 2102824 2103402 . - 0 ID=cds-WJG98710.1;Parent=gene-PUW34_10490;Dbxref=NCBI_GP:WJG98710.1;Name=WJG98710.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=PUW34_10490;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WJG98710.1;transl_table=11 CP118122.1 Genbank gene 2103392 2103997 . - . ID=gene-PUW34_10495;Name=PUW34_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10495 CP118122.1 Protein Homology CDS 2103392 2103997 . - 0 ID=cds-WJG98711.1;Parent=gene-PUW34_10495;Dbxref=NCBI_GP:WJG98711.1;Name=WJG98711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=PUW34_10495;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WJG98711.1;transl_table=11 CP118122.1 Genbank pseudogene 2103991 2105129 . - . ID=gene-PUW34_10500;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=pseudogene;locus_tag=PUW34_10500;pseudo=true CP118122.1 Protein Homology CDS 2103991 2105129 . - 0 ID=cds-PUW34_10500;Parent=gene-PUW34_10500;Note=frameshifted%3B internal stop;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=PUW34_10500;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2105129 2105760 . - . ID=gene-PUW34_10505;Name=PUW34_10505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10505;pseudo=true CP118122.1 Protein Homology CDS 2105129 2105760 . - 0 ID=cds-PUW34_10505;Parent=gene-PUW34_10505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=PUW34_10505;product=cobalt-precorrin-8 methylmutase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2105771 2106724 . - . ID=gene-PUW34_10510;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=PUW34_10510 CP118122.1 Protein Homology CDS 2105771 2106724 . - 0 ID=cds-WJG98712.1;Parent=gene-PUW34_10510;Dbxref=NCBI_GP:WJG98712.1;Name=WJG98712.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=PUW34_10510;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WJG98712.1;transl_table=11 CP118122.1 Genbank gene 2106721 2108100 . - . ID=gene-PUW34_10515;Name=PUW34_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10515 CP118122.1 Protein Homology CDS 2106721 2108100 . - 0 ID=cds-WJG98713.1;Parent=gene-PUW34_10515;Dbxref=NCBI_GP:WJG98713.1;Name=WJG98713.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=PUW34_10515;product=cobyrinate a%2Cc-diamide synthase;protein_id=WJG98713.1;transl_table=11 CP118122.1 cmsearch riboswitch 2108197 2108372 . - . ID=id-CP118122.1:2108197..2108372;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118122.1 Genbank pseudogene 2108697 2109591 . - . ID=gene-PUW34_10520;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=pseudogene;locus_tag=PUW34_10520;pseudo=true CP118122.1 Protein Homology CDS 2108697 2109591 . - 0 ID=cds-PUW34_10520;Parent=gene-PUW34_10520;Note=frameshifted;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=PUW34_10520;product=regulatory protein PocR;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2109808 2110602 . - . ID=gene-PUW34_10525;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=PUW34_10525 CP118122.1 Protein Homology CDS 2109808 2110602 . - 0 ID=cds-WJG98974.1;Parent=gene-PUW34_10525;Dbxref=NCBI_GP:WJG98974.1;Name=WJG98974.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=PUW34_10525;product=propanediol diffusion facilitator PduF;protein_id=WJG98974.1;transl_table=11 CP118122.1 Genbank gene 2111127 2111411 . + . ID=gene-PUW34_10530;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=PUW34_10530 CP118122.1 Protein Homology CDS 2111127 2111411 . + 0 ID=cds-WJG98714.1;Parent=gene-PUW34_10530;Dbxref=NCBI_GP:WJG98714.1;Name=WJG98714.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=PUW34_10530;product=propanediol utilization microcompartment protein PduA;protein_id=WJG98714.1;transl_table=11 CP118122.1 Genbank gene 2111408 2112220 . + . ID=gene-PUW34_10535;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=PUW34_10535 CP118122.1 Protein Homology CDS 2111408 2112220 . + 0 ID=cds-WJG98715.1;Parent=gene-PUW34_10535;Dbxref=NCBI_GP:WJG98715.1;Name=WJG98715.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=PUW34_10535;product=propanediol utilization microcompartment protein PduB;protein_id=WJG98715.1;transl_table=11 CP118122.1 Genbank gene 2112239 2113897 . + . ID=gene-PUW34_10540;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=PUW34_10540 CP118122.1 Protein Homology CDS 2112239 2113897 . + 0 ID=cds-WJG98716.1;Parent=gene-PUW34_10540;Dbxref=NCBI_GP:WJG98716.1;Name=WJG98716.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=PUW34_10540;product=propanediol dehydratase large subunit PduC;protein_id=WJG98716.1;transl_table=11 CP118122.1 Genbank gene 2113908 2114582 . + . ID=gene-PUW34_10545;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=PUW34_10545 CP118122.1 Protein Homology CDS 2113908 2114582 . + 0 ID=cds-WJG98717.1;Parent=gene-PUW34_10545;Dbxref=NCBI_GP:WJG98717.1;Name=WJG98717.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=PUW34_10545;product=propanediol dehydratase medium subunit PduD;protein_id=WJG98717.1;transl_table=11 CP118122.1 Genbank gene 2114597 2115118 . + . ID=gene-PUW34_10550;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=PUW34_10550 CP118122.1 Protein Homology CDS 2114597 2115118 . + 0 ID=cds-WJG98718.1;Parent=gene-PUW34_10550;Dbxref=NCBI_GP:WJG98718.1;Name=WJG98718.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=PUW34_10550;product=propanediol dehydratase small subunit PduE;protein_id=WJG98718.1;transl_table=11 CP118122.1 Genbank pseudogene 2115128 2116968 . + . ID=gene-PUW34_10555;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=pseudogene;locus_tag=PUW34_10555;pseudo=true CP118122.1 Protein Homology CDS 2115128 2116968 . + 0 ID=cds-PUW34_10555;Parent=gene-PUW34_10555;Note=frameshifted;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=PUW34_10555;product=propanediol dehydratase reactivase alpha subunit PduG;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2116958 2117308 . + . ID=gene-PUW34_10560;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=PUW34_10560 CP118122.1 Protein Homology CDS 2116958 2117308 . + 0 ID=cds-WJG98719.1;Parent=gene-PUW34_10560;Dbxref=NCBI_GP:WJG98719.1;Name=WJG98719.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=PUW34_10560;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WJG98719.1;transl_table=11 CP118122.1 Genbank gene 2117327 2117602 . + . ID=gene-PUW34_10565;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=PUW34_10565 CP118122.1 Protein Homology CDS 2117327 2117602 . + 0 ID=cds-WJG98720.1;Parent=gene-PUW34_10565;Dbxref=NCBI_GP:WJG98720.1;Name=WJG98720.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=PUW34_10565;product=propanediol utilization microcompartment protein PduJ;protein_id=WJG98720.1;transl_table=11 CP118122.1 Genbank gene 2117606 2118088 . + . ID=gene-PUW34_10570;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=PUW34_10570 CP118122.1 Protein Homology CDS 2117606 2118088 . + 0 ID=cds-WJG98721.1;Parent=gene-PUW34_10570;Dbxref=NCBI_GP:WJG98721.1;Name=WJG98721.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=PUW34_10570;product=propanediol utilization microcompartment protein PduK;protein_id=WJG98721.1;transl_table=11 CP118122.1 Genbank gene 2118088 2118720 . + . ID=gene-PUW34_10575;Name=PUW34_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10575 CP118122.1 Protein Homology CDS 2118088 2118720 . + 0 ID=cds-WJG98722.1;Parent=gene-PUW34_10575;Dbxref=NCBI_GP:WJG98722.1;Name=WJG98722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=PUW34_10575;product=phosphate propanoyltransferase;protein_id=WJG98722.1;transl_table=11 CP118122.1 Genbank gene 2118717 2119208 . + . ID=gene-PUW34_10580;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=PUW34_10580 CP118122.1 Protein Homology CDS 2118717 2119208 . + 0 ID=cds-WJG98723.1;Parent=gene-PUW34_10580;Dbxref=NCBI_GP:WJG98723.1;Name=WJG98723.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=PUW34_10580;product=propanediol utilization microcompartment protein PduM;protein_id=WJG98723.1;transl_table=11 CP118122.1 Genbank gene 2119212 2119487 . + . ID=gene-PUW34_10585;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=PUW34_10585 CP118122.1 Protein Homology CDS 2119212 2119487 . + 0 ID=cds-WJG98724.1;Parent=gene-PUW34_10585;Dbxref=NCBI_GP:WJG98724.1;Name=WJG98724.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=PUW34_10585;product=propanediol utilization microcompartment protein PduN;protein_id=WJG98724.1;transl_table=11 CP118122.1 Genbank pseudogene 2119497 2120470 . + . ID=gene-PUW34_10590;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=pseudogene;locus_tag=PUW34_10590;pseudo=true CP118122.1 Protein Homology CDS 2119497 2120470 . + 0 ID=cds-PUW34_10590;Parent=gene-PUW34_10590;Note=frameshifted;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=PUW34_10590;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2120467 2121861 . + . ID=gene-PUW34_10595;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=PUW34_10595 CP118122.1 Protein Homology CDS 2120467 2121861 . + 0 ID=cds-WJG98725.1;Parent=gene-PUW34_10595;Dbxref=NCBI_GP:WJG98725.1;Name=WJG98725.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=PUW34_10595;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WJG98725.1;transl_table=11 CP118122.1 Genbank gene 2121873 2122985 . + . ID=gene-PUW34_10600;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=PUW34_10600 CP118122.1 Protein Homology CDS 2121873 2122985 . + 0 ID=cds-WJG98726.1;Parent=gene-PUW34_10600;Dbxref=NCBI_GP:WJG98726.1;Name=WJG98726.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=PUW34_10600;product=1-propanol dehydrogenase PduQ;protein_id=WJG98726.1;transl_table=11 CP118122.1 Genbank gene 2122982 2124337 . + . ID=gene-PUW34_10605;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=PUW34_10605 CP118122.1 Protein Homology CDS 2122982 2124337 . + 0 ID=cds-WJG98727.1;Parent=gene-PUW34_10605;Dbxref=NCBI_GP:WJG98727.1;Name=WJG98727.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=PUW34_10605;product=cobalamin reductase PduS;protein_id=WJG98727.1;transl_table=11 CP118122.1 Genbank gene 2124340 2124894 . + . ID=gene-PUW34_10610;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=PUW34_10610 CP118122.1 Protein Homology CDS 2124340 2124894 . + 0 ID=cds-WJG98728.1;Parent=gene-PUW34_10610;Dbxref=NCBI_GP:WJG98728.1;Name=WJG98728.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=PUW34_10610;product=propanediol utilization microcompartment protein PduT;protein_id=WJG98728.1;transl_table=11 CP118122.1 Genbank gene 2124894 2125244 . + . ID=gene-PUW34_10615;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=PUW34_10615 CP118122.1 Protein Homology CDS 2124894 2125244 . + 0 ID=cds-WJG98729.1;Parent=gene-PUW34_10615;Dbxref=NCBI_GP:WJG98729.1;Name=WJG98729.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=PUW34_10615;product=propanediol utilization microcompartment protein PduU;protein_id=WJG98729.1;transl_table=11 CP118122.1 Genbank gene 2125249 2125701 . + . ID=gene-PUW34_10620;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=PUW34_10620 CP118122.1 Protein Homology CDS 2125249 2125701 . + 0 ID=cds-WJG98730.1;Parent=gene-PUW34_10620;Dbxref=NCBI_GP:WJG98730.1;Name=WJG98730.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=PUW34_10620;product=propanediol utilization protein PduV;protein_id=WJG98730.1;transl_table=11 CP118122.1 Genbank gene 2125686 2126900 . + . ID=gene-PUW34_10625;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=PUW34_10625 CP118122.1 Protein Homology CDS 2125686 2126900 . + 0 ID=cds-WJG98731.1;Parent=gene-PUW34_10625;Dbxref=NCBI_GP:WJG98731.1;Name=WJG98731.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=PUW34_10625;product=propanediol utilization propionate kinase PduW;protein_id=WJG98731.1;transl_table=11 CP118122.1 Genbank gene 2126994 2127860 . + . ID=gene-PUW34_10630;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=PUW34_10630 CP118122.1 Protein Homology CDS 2126994 2127860 . + 0 ID=cds-WJG98732.1;Parent=gene-PUW34_10630;Dbxref=NCBI_GP:WJG98732.1;Name=WJG98732.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=PUW34_10630;product=L-threonine kinase PduX;protein_id=WJG98732.1;transl_table=11 CP118122.1 Genbank gene 2127894 2128229 . - . ID=gene-PUW34_10635;Name=PUW34_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10635 CP118122.1 Protein Homology CDS 2127894 2128229 . - 0 ID=cds-WJG98733.1;Parent=gene-PUW34_10635;Dbxref=NCBI_GP:WJG98733.1;Name=WJG98733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=PUW34_10635;product=DUF496 family protein;protein_id=WJG98733.1;transl_table=11 CP118122.1 Genbank gene 2128473 2129531 . - . ID=gene-PUW34_10640;Name=PUW34_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10640 CP118122.1 Protein Homology CDS 2128473 2129531 . - 0 ID=cds-WJG98734.1;Parent=gene-PUW34_10640;Dbxref=NCBI_GP:WJG98734.1;Name=WJG98734.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=PUW34_10640;product=FUSC family protein;protein_id=WJG98734.1;transl_table=11 CP118122.1 Genbank gene 2129650 2130117 . - . ID=gene-PUW34_10645;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=PUW34_10645 CP118122.1 Protein Homology CDS 2129650 2130117 . - 0 ID=cds-WJG98735.1;Parent=gene-PUW34_10645;Dbxref=NCBI_GP:WJG98735.1;Name=WJG98735.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=PUW34_10645;product=DNA gyrase inhibitor SbmC;protein_id=WJG98735.1;transl_table=11 CP118122.1 Genbank gene 2130268 2131440 . - . ID=gene-PUW34_10650;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=PUW34_10650 CP118122.1 Protein Homology CDS 2130268 2131440 . - 0 ID=cds-WJG98736.1;Parent=gene-PUW34_10650;Dbxref=NCBI_GP:WJG98736.1;Name=WJG98736.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=PUW34_10650;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WJG98736.1;transl_table=11 CP118122.1 Genbank gene 2131564 2132328 . - . ID=gene-PUW34_10655;Name=PUW34_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10655 CP118122.1 Protein Homology CDS 2131564 2132328 . - 0 ID=cds-WJG98737.1;Parent=gene-PUW34_10655;Dbxref=NCBI_GP:WJG98737.1;Name=WJG98737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=PUW34_10655;product=thiosulfate reductase cytochrome B subunit;protein_id=WJG98737.1;transl_table=11 CP118122.1 Genbank gene 2132325 2132903 . - . ID=gene-PUW34_10660;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=PUW34_10660 CP118122.1 Protein Homology CDS 2132325 2132903 . - 0 ID=cds-WJG98738.1;Parent=gene-PUW34_10660;Dbxref=NCBI_GP:WJG98738.1;Name=WJG98738.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=PUW34_10660;product=thiosulfate reductase electron transport protein PhsB;protein_id=WJG98738.1;transl_table=11 CP118122.1 Genbank pseudogene 2132918 2135193 . - . ID=gene-PUW34_10665;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=pseudogene;locus_tag=PUW34_10665;pseudo=true CP118122.1 Protein Homology CDS 2132918 2135193 . - 0 ID=cds-PUW34_10665;Parent=gene-PUW34_10665;Note=frameshifted;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=PUW34_10665;product=thiosulfate reductase PhsA;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2135453 2135563 . - . ID=gene-PUW34_10670;Name=PUW34_10670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10670;pseudo=true CP118122.1 Protein Homology CDS 2135453 2135563 . - 0 ID=cds-PUW34_10670;Parent=gene-PUW34_10670;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=PUW34_10670;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2135813 2138092 . + . ID=gene-PUW34_10675;Name=PUW34_10675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10675;pseudo=true CP118122.1 Protein Homology CDS 2135813 2138092 . + 0 ID=cds-PUW34_10675;Parent=gene-PUW34_10675;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=PUW34_10675;product=type III secretion system effector HECT-type E3 ubiquitin transferase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2138225 2138302 . - . ID=gene-PUW34_10680;Name=PUW34_10680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10680;pseudo=true CP118122.1 Protein Homology CDS 2138225 2138302 . - 0 ID=cds-PUW34_10680;Parent=gene-PUW34_10680;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=PUW34_10680;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2138462 2139892 . + . ID=gene-PUW34_10685;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=PUW34_10685 CP118122.1 Protein Homology CDS 2138462 2139892 . + 0 ID=cds-WJG98739.1;Parent=gene-PUW34_10685;Dbxref=NCBI_GP:WJG98739.1;Name=WJG98739.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=PUW34_10685;product=exodeoxyribonuclease I;protein_id=WJG98739.1;transl_table=11 CP118122.1 Genbank gene 2140028 2141386 . - . ID=gene-PUW34_10690;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=PUW34_10690 CP118122.1 Protein Homology CDS 2140028 2141386 . - 0 ID=cds-WJG98740.1;Parent=gene-PUW34_10690;Dbxref=NCBI_GP:WJG98740.1;Name=WJG98740.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=PUW34_10690;product=putrescine/proton symporter PlaP;protein_id=WJG98740.1;transl_table=11 CP118122.1 Genbank gene 2141376 2141438 . - . ID=gene-PUW34_10695;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=PUW34_10695 CP118122.1 Protein Homology CDS 2141376 2141438 . - 0 ID=cds-WJG98975.1;Parent=gene-PUW34_10695;Dbxref=NCBI_GP:WJG98975.1;Name=WJG98975.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=PUW34_10695;product=membrane protein YoeI;protein_id=WJG98975.1;transl_table=11 CP118122.1 Genbank gene 2141671 2142585 . - . ID=gene-PUW34_10700;Name=PUW34_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10700 CP118122.1 Protein Homology CDS 2141671 2142585 . - 0 ID=cds-WJG98741.1;Parent=gene-PUW34_10700;Dbxref=NCBI_GP:WJG98741.1;Name=WJG98741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=PUW34_10700;product=LysR family transcriptional regulator;protein_id=WJG98741.1;transl_table=11 CP118122.1 Genbank gene 2142631 2143455 . - . ID=gene-PUW34_10705;Name=PUW34_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10705 CP118122.1 Protein Homology CDS 2142631 2143455 . - 0 ID=cds-WJG98742.1;Parent=gene-PUW34_10705;Dbxref=NCBI_GP:WJG98742.1;Name=WJG98742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=PUW34_10705;product=SDR family oxidoreductase;protein_id=WJG98742.1;transl_table=11 CP118122.1 Genbank gene 2143618 2143668 . + . ID=gene-PUW34_10710;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=PUW34_10710 CP118122.1 Protein Homology CDS 2143618 2143668 . + 0 ID=cds-WJG98976.1;Parent=gene-PUW34_10710;Dbxref=NCBI_GP:WJG98976.1;Name=WJG98976.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=PUW34_10710;product=his operon leader peptide;protein_id=WJG98976.1;transl_table=11 CP118122.1 cmsearch sequence_feature 2143644 2143767 . + . ID=id-CP118122.1:2143644..2143767;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118122.1 Genbank gene 2143814 2144713 . + . ID=gene-PUW34_10715;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=PUW34_10715 CP118122.1 Protein Homology CDS 2143814 2144713 . + 0 ID=cds-WJG98743.1;Parent=gene-PUW34_10715;Dbxref=NCBI_GP:WJG98743.1;Name=WJG98743.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=PUW34_10715;product=ATP phosphoribosyltransferase;protein_id=WJG98743.1;transl_table=11 CP118122.1 Genbank gene 2144816 2146120 . + . ID=gene-PUW34_10720;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=PUW34_10720 CP118122.1 Protein Homology CDS 2144816 2146120 . + 0 ID=cds-WJG98744.1;Parent=gene-PUW34_10720;Dbxref=NCBI_GP:WJG98744.1;Name=WJG98744.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=PUW34_10720;product=histidinol dehydrogenase;protein_id=WJG98744.1;transl_table=11 CP118122.1 Genbank gene 2146117 2147196 . + . ID=gene-PUW34_10725;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=PUW34_10725 CP118122.1 Protein Homology CDS 2146117 2147196 . + 0 ID=cds-WJG98745.1;Parent=gene-PUW34_10725;Dbxref=NCBI_GP:WJG98745.1;Name=WJG98745.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=PUW34_10725;product=histidinol-phosphate transaminase;protein_id=WJG98745.1;transl_table=11 CP118122.1 Genbank gene 2147193 2148260 . + . ID=gene-PUW34_10730;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=PUW34_10730 CP118122.1 Protein Homology CDS 2147193 2148260 . + 0 ID=cds-WJG98746.1;Parent=gene-PUW34_10730;Dbxref=NCBI_GP:WJG98746.1;Name=WJG98746.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=PUW34_10730;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WJG98746.1;transl_table=11 CP118122.1 Genbank gene 2148260 2148850 . + . ID=gene-PUW34_10735;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=PUW34_10735 CP118122.1 Protein Homology CDS 2148260 2148850 . + 0 ID=cds-WJG98747.1;Parent=gene-PUW34_10735;Dbxref=NCBI_GP:WJG98747.1;Name=WJG98747.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=PUW34_10735;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WJG98747.1;transl_table=11 CP118122.1 Genbank gene 2148850 2149587 . + . ID=gene-PUW34_10740;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=PUW34_10740 CP118122.1 Protein Homology CDS 2148850 2149587 . + 0 ID=cds-WJG98748.1;Parent=gene-PUW34_10740;Dbxref=NCBI_GP:WJG98748.1;Name=WJG98748.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=PUW34_10740;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WJG98748.1;transl_table=11 CP118122.1 Genbank gene 2149569 2150345 . + . ID=gene-PUW34_10745;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=PUW34_10745 CP118122.1 Protein Homology CDS 2149569 2150345 . + 0 ID=cds-WJG98749.1;Parent=gene-PUW34_10745;Dbxref=NCBI_GP:WJG98749.1;Name=WJG98749.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=PUW34_10745;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WJG98749.1;transl_table=11 CP118122.1 Genbank pseudogene 2150339 2150949 . + . ID=gene-PUW34_10750;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=pseudogene;locus_tag=PUW34_10750;pseudo=true CP118122.1 Protein Homology CDS 2150339 2150949 . + 0 ID=cds-PUW34_10750;Parent=gene-PUW34_10750;Note=frameshifted;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=PUW34_10750;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2151028 2152011 . - . ID=gene-PUW34_10755;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=PUW34_10755 CP118122.1 Protein Homology CDS 2151028 2152011 . - 0 ID=cds-WJG98750.1;Parent=gene-PUW34_10755;Dbxref=NCBI_GP:WJG98750.1;Name=WJG98750.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=PUW34_10755;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WJG98750.1;transl_table=11 CP118122.1 Genbank gene 2152154 2153320 . - . ID=gene-PUW34_10760;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=PUW34_10760 CP118122.1 Protein Homology CDS 2152154 2153320 . - 0 ID=cds-WJG98751.1;Parent=gene-PUW34_10760;Dbxref=NCBI_GP:WJG98751.1;Name=WJG98751.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=PUW34_10760;product=UDP-glucose 6-dehydrogenase;protein_id=WJG98751.1;transl_table=11 CP118122.1 Genbank gene 2153557 2154963 . - . ID=gene-PUW34_10765;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=PUW34_10765 CP118122.1 Protein Homology CDS 2153557 2154963 . - 0 ID=cds-WJG98752.1;Parent=gene-PUW34_10765;Dbxref=NCBI_GP:WJG98752.1;Name=WJG98752.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=PUW34_10765;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WJG98752.1;transl_table=11 CP118122.1 Genbank gene 2155127 2156557 . - . ID=gene-PUW34_10770;Name=PUW34_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10770 CP118122.1 Protein Homology CDS 2155127 2156557 . - 0 ID=cds-WJG98753.1;Parent=gene-PUW34_10770;Dbxref=NCBI_GP:WJG98753.1;Name=WJG98753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=PUW34_10770;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WJG98753.1;transl_table=11 CP118122.1 Genbank gene 2156628 2158061 . - . ID=gene-PUW34_10775;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=PUW34_10775 CP118122.1 Protein Homology CDS 2156628 2158061 . - 0 ID=cds-WJG98754.1;Parent=gene-PUW34_10775;Dbxref=NCBI_GP:WJG98754.1;Name=WJG98754.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=PUW34_10775;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WJG98754.1;transl_table=11 CP118122.1 Genbank gene 2158048 2159487 . - . ID=gene-PUW34_10780;Name=PUW34_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10780 CP118122.1 Protein Homology CDS 2158048 2159487 . - 0 ID=cds-WJG98755.1;Parent=gene-PUW34_10780;Dbxref=NCBI_GP:WJG98755.1;Name=WJG98755.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=PUW34_10780;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WJG98755.1;transl_table=11 CP118122.1 Genbank gene 2159488 2160432 . - . ID=gene-PUW34_10785;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=PUW34_10785 CP118122.1 Protein Homology CDS 2159488 2160432 . - 0 ID=cds-WJG98756.1;Parent=gene-PUW34_10785;Dbxref=NCBI_GP:WJG98756.1;Name=WJG98756.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=PUW34_10785;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WJG98756.1;transl_table=11 CP118122.1 Genbank pseudogene 2160433 2161493 . - . ID=gene-PUW34_10790;Name=PUW34_10790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10790;pseudo=true CP118122.1 Protein Homology CDS 2160433 2161493 . - 0 ID=cds-PUW34_10790;Parent=gene-PUW34_10790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=PUW34_10790;product=glycosyltransferase family 1 protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2162088 2163068 . - . ID=gene-PUW34_10795;Name=PUW34_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10795 CP118122.1 Protein Homology CDS 2162088 2163068 . - 0 ID=cds-WJG98757.1;Parent=gene-PUW34_10795;Dbxref=NCBI_GP:WJG98757.1;Name=WJG98757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233008.1;locus_tag=PUW34_10795;product=glycosyltransferase family 2 protein;protein_id=WJG98757.1;transl_table=11 CP118122.1 Genbank gene 2163070 2164368 . - . ID=gene-PUW34_10800;Name=PUW34_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10800 CP118122.1 Protein Homology CDS 2163070 2164368 . - 0 ID=cds-WJG98758.1;Parent=gene-PUW34_10800;Dbxref=NCBI_GP:WJG98758.1;Name=WJG98758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228887.1;locus_tag=PUW34_10800;product=MATE family efflux transporter;protein_id=WJG98758.1;transl_table=11 CP118122.1 Genbank gene 2164439 2165455 . - . ID=gene-PUW34_10805;Name=PUW34_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10805 CP118122.1 Protein Homology CDS 2164439 2165455 . - 0 ID=cds-WJG98759.1;Parent=gene-PUW34_10805;Dbxref=NCBI_GP:WJG98759.1;Name=WJG98759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770936.1;locus_tag=PUW34_10805;product=CDP-paratose 2-epimerase;protein_id=WJG98759.1;transl_table=11 CP118122.1 Genbank gene 2165452 2166291 . - . ID=gene-PUW34_10810;Name=PUW34_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10810 CP118122.1 Protein Homology CDS 2165452 2166291 . - 0 ID=cds-WJG98760.1;Parent=gene-PUW34_10810;Dbxref=NCBI_GP:WJG98760.1;Name=WJG98760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697757.1;locus_tag=PUW34_10810;product=CDP-paratose synthase;protein_id=WJG98760.1;transl_table=11 CP118122.1 Genbank gene 2166328 2167641 . - . ID=gene-PUW34_10815;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=PUW34_10815 CP118122.1 Protein Homology CDS 2166328 2167641 . - 0 ID=cds-WJG98761.1;Parent=gene-PUW34_10815;Dbxref=NCBI_GP:WJG98761.1;Name=WJG98761.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=PUW34_10815;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WJG98761.1;transl_table=11 CP118122.1 Genbank gene 2167668 2168747 . - . ID=gene-PUW34_10820;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=PUW34_10820 CP118122.1 Protein Homology CDS 2167668 2168747 . - 0 ID=cds-WJG98762.1;Parent=gene-PUW34_10820;Dbxref=NCBI_GP:WJG98762.1;Name=WJG98762.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=PUW34_10820;product=CDP-glucose 4%2C6-dehydratase;protein_id=WJG98762.1;transl_table=11 CP118122.1 Genbank gene 2168752 2169525 . - . ID=gene-PUW34_10825;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=PUW34_10825 CP118122.1 Protein Homology CDS 2168752 2169525 . - 0 ID=cds-WJG98763.1;Parent=gene-PUW34_10825;Dbxref=NCBI_GP:WJG98763.1;Name=WJG98763.1;Ontology_term=GO:0009103,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=PUW34_10825;product=glucose-1-phosphate cytidylyltransferase;protein_id=WJG98763.1;transl_table=11 CP118122.1 Genbank pseudogene 2169522 2170514 . - . ID=gene-PUW34_10830;Name=PUW34_10830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_10830;pseudo=true CP118122.1 Protein Homology CDS 2169522 2170514 . - 0 ID=cds-PUW34_10830;Parent=gene-PUW34_10830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=PUW34_10830;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2170520 2171071 . - . ID=gene-PUW34_10835;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=PUW34_10835 CP118122.1 Protein Homology CDS 2170520 2171071 . - 0 ID=cds-WJG98764.1;Parent=gene-PUW34_10835;Dbxref=NCBI_GP:WJG98764.1;Name=WJG98764.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=PUW34_10835;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WJG98764.1;transl_table=11 CP118122.1 Genbank gene 2171072 2171950 . - . ID=gene-PUW34_10840;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=PUW34_10840 CP118122.1 Protein Homology CDS 2171072 2171950 . - 0 ID=cds-WJG98977.1;Parent=gene-PUW34_10840;Dbxref=NCBI_GP:WJG98977.1;Name=WJG98977.1;Ontology_term=GO:0045226,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=PUW34_10840;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WJG98977.1;transl_table=11 CP118122.1 Genbank gene 2171998 2172897 . - . ID=gene-PUW34_10845;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=PUW34_10845 CP118122.1 Protein Homology CDS 2171998 2172897 . - 0 ID=cds-WJG98765.1;Parent=gene-PUW34_10845;Dbxref=NCBI_GP:WJG98765.1;Name=WJG98765.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=PUW34_10845;product=dTDP-4-dehydrorhamnose reductase;protein_id=WJG98765.1;transl_table=11 CP118122.1 Genbank gene 2172897 2173982 . - . ID=gene-PUW34_10850;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=PUW34_10850 CP118122.1 Protein Homology CDS 2172897 2173982 . - 0 ID=cds-WJG98766.1;Parent=gene-PUW34_10850;Dbxref=NCBI_GP:WJG98766.1;Name=WJG98766.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=PUW34_10850;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WJG98766.1;transl_table=11 CP118122.1 Genbank gene 2174359 2175252 . - . ID=gene-PUW34_10855;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=PUW34_10855 CP118122.1 Protein Homology CDS 2174359 2175252 . - 0 ID=cds-WJG98767.1;Parent=gene-PUW34_10855;Dbxref=NCBI_GP:WJG98767.1;Name=WJG98767.1;Ontology_term=GO:0009225,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=PUW34_10855;product=GalU regulator GalF;protein_id=WJG98767.1;transl_table=11 CP118122.1 Genbank gene 2175430 2176833 . - . ID=gene-PUW34_10860;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=PUW34_10860 CP118122.1 Protein Homology CDS 2175430 2176833 . - 0 ID=cds-WJG98768.1;Parent=gene-PUW34_10860;Dbxref=NCBI_GP:WJG98768.1;Name=WJG98768.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=PUW34_10860;product=colanic acid biosynthesis protein WcaM;protein_id=WJG98768.1;transl_table=11 CP118122.1 Genbank gene 2176844 2178064 . - . ID=gene-PUW34_10865;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=PUW34_10865 CP118122.1 Protein Homology CDS 2176844 2178064 . - 0 ID=cds-WJG98769.1;Parent=gene-PUW34_10865;Dbxref=NCBI_GP:WJG98769.1;Name=WJG98769.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=PUW34_10865;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WJG98769.1;transl_table=11 CP118122.1 Genbank gene 2178061 2179341 . - . ID=gene-PUW34_10870;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=PUW34_10870 CP118122.1 Protein Homology CDS 2178061 2179341 . - 0 ID=cds-WJG98770.1;Parent=gene-PUW34_10870;Dbxref=NCBI_GP:WJG98770.1;Name=WJG98770.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=PUW34_10870;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WJG98770.1;transl_table=11 CP118122.1 Genbank gene 2179363 2180841 . - . ID=gene-PUW34_10875;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=PUW34_10875 CP118122.1 Protein Homology CDS 2179363 2180841 . - 0 ID=cds-WJG98771.1;Parent=gene-PUW34_10875;Dbxref=NCBI_GP:WJG98771.1;Name=WJG98771.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=PUW34_10875;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WJG98771.1;transl_table=11 CP118122.1 Genbank gene 2180943 2182337 . - . ID=gene-PUW34_10880;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=PUW34_10880 CP118122.1 Protein Homology CDS 2180943 2182337 . - 0 ID=cds-WJG98772.1;Parent=gene-PUW34_10880;Dbxref=NCBI_GP:WJG98772.1;Name=WJG98772.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=PUW34_10880;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WJG98772.1;transl_table=11 CP118122.1 Genbank gene 2182391 2183761 . - . ID=gene-PUW34_10885;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=PUW34_10885 CP118122.1 Protein Homology CDS 2182391 2183761 . - 0 ID=cds-WJG98773.1;Parent=gene-PUW34_10885;Dbxref=NCBI_GP:WJG98773.1;Name=WJG98773.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=PUW34_10885;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WJG98773.1;transl_table=11 CP118122.1 Genbank gene 2183872 2185314 . - . ID=gene-PUW34_10890;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=PUW34_10890 CP118122.1 Protein Homology CDS 2183872 2185314 . - 0 ID=cds-WJG98774.1;Parent=gene-PUW34_10890;Dbxref=NCBI_GP:WJG98774.1;Name=WJG98774.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=PUW34_10890;product=mannose-1-phosphate guanyltransferase;protein_id=WJG98774.1;transl_table=11 CP118122.1 Genbank gene 2185311 2186534 . - . ID=gene-PUW34_10895;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=PUW34_10895 CP118122.1 Protein Homology CDS 2185311 2186534 . - 0 ID=cds-WJG98775.1;Parent=gene-PUW34_10895;Dbxref=NCBI_GP:WJG98775.1;Name=WJG98775.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=PUW34_10895;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WJG98775.1;transl_table=11 CP118122.1 Genbank gene 2186531 2187004 . - . ID=gene-PUW34_10900;Name=PUW34_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10900 CP118122.1 Protein Homology CDS 2186531 2187004 . - 0 ID=cds-WJG98776.1;Parent=gene-PUW34_10900;Dbxref=NCBI_GP:WJG98776.1;Name=WJG98776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=PUW34_10900;product=GDP-mannose mannosyl hydrolase;protein_id=WJG98776.1;transl_table=11 CP118122.1 Genbank gene 2187007 2187972 . - . ID=gene-PUW34_10905;Name=PUW34_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10905 CP118122.1 Protein Homology CDS 2187007 2187972 . - 0 ID=cds-WJG98777.1;Parent=gene-PUW34_10905;Dbxref=NCBI_GP:WJG98777.1;Name=WJG98777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=PUW34_10905;product=GDP-L-fucose synthase;protein_id=WJG98777.1;transl_table=11 CP118122.1 Genbank gene 2187975 2189096 . - . ID=gene-PUW34_10910;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=PUW34_10910 CP118122.1 Protein Homology CDS 2187975 2189096 . - 0 ID=cds-WJG98778.1;Parent=gene-PUW34_10910;Dbxref=NCBI_GP:WJG98778.1;Name=WJG98778.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=PUW34_10910;product=GDP-mannose 4%2C6-dehydratase;protein_id=WJG98778.1;transl_table=11 CP118122.1 Genbank pseudogene 2189120 2189673 . - . ID=gene-PUW34_10915;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=pseudogene;locus_tag=PUW34_10915;pseudo=true CP118122.1 Protein Homology CDS 2189120 2189673 . - 0 ID=cds-PUW34_10915;Parent=gene-PUW34_10915;Note=frameshifted;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=PUW34_10915;product=colanic acid biosynthesis acetyltransferase WcaF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2189689 2190435 . - . ID=gene-PUW34_10920;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=PUW34_10920 CP118122.1 Protein Homology CDS 2189689 2190435 . - 0 ID=cds-WJG98779.1;Parent=gene-PUW34_10920;Dbxref=NCBI_GP:WJG98779.1;Name=WJG98779.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=PUW34_10920;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WJG98779.1;transl_table=11 CP118122.1 Genbank gene 2190448 2191662 . - . ID=gene-PUW34_10925;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=PUW34_10925 CP118122.1 Protein Homology CDS 2190448 2191662 . - 0 ID=cds-WJG98780.1;Parent=gene-PUW34_10925;Dbxref=NCBI_GP:WJG98780.1;Name=WJG98780.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=PUW34_10925;product=colanic acid polymerase WcaD;protein_id=WJG98780.1;transl_table=11 CP118122.1 Genbank gene 2191637 2192854 . - . ID=gene-PUW34_10930;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=PUW34_10930 CP118122.1 Protein Homology CDS 2191637 2192854 . - 0 ID=cds-WJG98781.1;Parent=gene-PUW34_10930;Dbxref=NCBI_GP:WJG98781.1;Name=WJG98781.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=PUW34_10930;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WJG98781.1;transl_table=11 CP118122.1 Genbank gene 2192851 2193339 . - . ID=gene-PUW34_10935;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=PUW34_10935 CP118122.1 Protein Homology CDS 2192851 2193339 . - 0 ID=cds-WJG98782.1;Parent=gene-PUW34_10935;Dbxref=NCBI_GP:WJG98782.1;Name=WJG98782.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=PUW34_10935;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WJG98782.1;transl_table=11 CP118122.1 Genbank gene 2193342 2194184 . - . ID=gene-PUW34_10940;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=PUW34_10940 CP118122.1 Protein Homology CDS 2193342 2194184 . - 0 ID=cds-WJG98783.1;Parent=gene-PUW34_10940;Dbxref=NCBI_GP:WJG98783.1;Name=WJG98783.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=PUW34_10940;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WJG98783.1;transl_table=11 CP118122.1 Genbank gene 2194271 2196430 . - . ID=gene-PUW34_10945;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=PUW34_10945 CP118122.1 Protein Homology CDS 2194271 2196430 . - 0 ID=cds-WJG98784.1;Parent=gene-PUW34_10945;Dbxref=NCBI_GP:WJG98784.1;Name=WJG98784.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=PUW34_10945;product=tyrosine-protein kinase Wzc;protein_id=WJG98784.1;transl_table=11 CP118122.1 Genbank gene 2196427 2196876 . - . ID=gene-PUW34_10950;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=PUW34_10950 CP118122.1 Protein Homology CDS 2196427 2196876 . - 0 ID=cds-WJG98785.1;Parent=gene-PUW34_10950;Dbxref=NCBI_GP:WJG98785.1;Name=WJG98785.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=PUW34_10950;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WJG98785.1;transl_table=11 CP118122.1 Genbank gene 2196882 2198021 . - . ID=gene-PUW34_10955;Name=PUW34_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10955 CP118122.1 Protein Homology CDS 2196882 2198021 . - 0 ID=cds-WJG98786.1;Parent=gene-PUW34_10955;Dbxref=NCBI_GP:WJG98786.1;Name=WJG98786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=PUW34_10955;product=polysaccharide export protein;protein_id=WJG98786.1;transl_table=11 CP118122.1 Genbank gene 2198696 2200276 . + . ID=gene-PUW34_10960;Name=PUW34_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10960 CP118122.1 Protein Homology CDS 2198696 2200276 . + 0 ID=cds-WJG98787.1;Parent=gene-PUW34_10960;Dbxref=NCBI_GP:WJG98787.1;Name=WJG98787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=PUW34_10960;product=TerC family protein;protein_id=WJG98787.1;transl_table=11 CP118122.1 Genbank gene 2200362 2202218 . - . ID=gene-PUW34_10965;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=PUW34_10965 CP118122.1 Protein Homology CDS 2200362 2202218 . - 0 ID=cds-WJG98788.1;Parent=gene-PUW34_10965;Dbxref=NCBI_GP:WJG98788.1;Name=WJG98788.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=PUW34_10965;product=outer membrane assembly protein AsmA;protein_id=WJG98788.1;transl_table=11 CP118122.1 Genbank gene 2202257 2202838 . - . ID=gene-PUW34_10970;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=PUW34_10970 CP118122.1 Protein Homology CDS 2202257 2202838 . - 0 ID=cds-WJG98789.1;Parent=gene-PUW34_10970;Dbxref=NCBI_GP:WJG98789.1;Name=WJG98789.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=PUW34_10970;product=dCTP deaminase;protein_id=WJG98789.1;transl_table=11 CP118122.1 Genbank gene 2202929 2203570 . - . ID=gene-PUW34_10975;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=PUW34_10975 CP118122.1 Protein Homology CDS 2202929 2203570 . - 0 ID=cds-WJG98790.1;Parent=gene-PUW34_10975;Dbxref=NCBI_GP:WJG98790.1;Name=WJG98790.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=PUW34_10975;product=uridine kinase;protein_id=WJG98790.1;transl_table=11 CP118122.1 Genbank gene 2203901 2206891 . + . ID=gene-PUW34_10980;Name=PUW34_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_10980 CP118122.1 Protein Homology CDS 2203901 2206891 . + 0 ID=cds-WJG98791.1;Parent=gene-PUW34_10980;Dbxref=NCBI_GP:WJG98791.1;Name=WJG98791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=PUW34_10980;product=MASE1 domain-containing protein;protein_id=WJG98791.1;transl_table=11 CP118122.1 Genbank gene 2206859 2207728 . - . ID=gene-PUW34_10985;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=PUW34_10985 CP118122.1 Protein Homology CDS 2206859 2207728 . - 0 ID=cds-WJG98792.1;Parent=gene-PUW34_10985;Dbxref=NCBI_GP:WJG98792.1;Name=WJG98792.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=PUW34_10985;product=DNA-3-methyladenine glycosylase 2;protein_id=WJG98792.1;transl_table=11 CP118122.1 Genbank gene 2207862 2209214 . + . ID=gene-PUW34_10990;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=PUW34_10990 CP118122.1 Protein Homology CDS 2207862 2209214 . + 0 ID=cds-WJG98793.1;Parent=gene-PUW34_10990;Dbxref=NCBI_GP:WJG98793.1;Name=WJG98793.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=PUW34_10990;product=molecular chaperone;protein_id=WJG98793.1;transl_table=11 CP118122.1 Genbank gene 2209313 2209372 . - . ID=gene-PUW34_10995;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=PUW34_10995 CP118122.1 Protein Homology CDS 2209313 2209372 . - 0 ID=cds-WJG98978.1;Parent=gene-PUW34_10995;Dbxref=NCBI_GP:WJG98978.1;Name=WJG98978.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=PUW34_10995;product=type I toxin-antitoxin system toxin IbsA;protein_id=WJG98978.1;transl_table=11 CP118122.1 Genbank gene 2209655 2210896 . + . ID=gene-PUW34_11000;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=PUW34_11000 CP118122.1 Protein Homology CDS 2209655 2210896 . + 0 ID=cds-WJG98794.1;Parent=gene-PUW34_11000;Dbxref=NCBI_GP:WJG98794.1;Name=WJG98794.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=PUW34_11000;product=multidrug efflux RND transporter subunit MdtA;protein_id=WJG98794.1;transl_table=11 CP118122.1 Genbank pseudogene 2210896 2214017 . + . ID=gene-PUW34_11005;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=pseudogene;locus_tag=PUW34_11005;pseudo=true CP118122.1 Protein Homology CDS 2210896 2214017 . + 0 ID=cds-PUW34_11005;Parent=gene-PUW34_11005;Note=frameshifted;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=PUW34_11005;product=multidrug efflux RND transporter permease subunit MdtB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2214018 2217098 . + . ID=gene-PUW34_11010;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=PUW34_11010 CP118122.1 Protein Homology CDS 2214018 2217098 . + 0 ID=cds-WJG98795.1;Parent=gene-PUW34_11010;Dbxref=NCBI_GP:WJG98795.1;Name=WJG98795.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=PUW34_11010;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WJG98795.1;transl_table=11 CP118122.1 Genbank pseudogene 2217095 2218505 . + . ID=gene-PUW34_11015;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=pseudogene;locus_tag=PUW34_11015;pseudo=true CP118122.1 Protein Homology CDS 2217095 2218505 . + 0 ID=cds-PUW34_11015;Parent=gene-PUW34_11015;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=PUW34_11015;product=multidrug transporter subunit MdtD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2218505 2219908 . + . ID=gene-PUW34_11020;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=PUW34_11020 CP118122.1 Protein Homology CDS 2218505 2219908 . + 0 ID=cds-WJG98796.1;Parent=gene-PUW34_11020;Dbxref=NCBI_GP:WJG98796.1;Name=WJG98796.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=PUW34_11020;product=two-component system sensor histidine kinase BaeS;protein_id=WJG98796.1;transl_table=11 CP118122.1 Genbank gene 2219905 2220627 . + . ID=gene-PUW34_11025;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=PUW34_11025 CP118122.1 Protein Homology CDS 2219905 2220627 . + 0 ID=cds-WJG98797.1;Parent=gene-PUW34_11025;Dbxref=NCBI_GP:WJG98797.1;Name=WJG98797.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=PUW34_11025;product=two-component system response regulator BaeR;protein_id=WJG98797.1;transl_table=11 CP118122.1 Genbank gene 2220896 2222098 . + . ID=gene-PUW34_11030;Name=PUW34_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11030 CP118122.1 Protein Homology CDS 2220896 2222098 . + 0 ID=cds-WJG98798.1;Parent=gene-PUW34_11030;Dbxref=NCBI_GP:WJG98798.1;Name=WJG98798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=PUW34_11030;product=cytoplasmic protein;protein_id=WJG98798.1;transl_table=11 CP118122.1 Genbank pseudogene 2222098 2222813 . + . ID=gene-PUW34_11035;Name=PUW34_11035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11035;pseudo=true CP118122.1 Protein Homology CDS 2222098 2222813 . + 0 ID=cds-PUW34_11035;Parent=gene-PUW34_11035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=PUW34_11035;product=DUF1266 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2222824 2224935 . + . ID=gene-PUW34_11040;Name=PUW34_11040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11040;pseudo=true CP118122.1 Protein Homology CDS 2222824 2224935 . + 0 ID=cds-PUW34_11040;Parent=gene-PUW34_11040;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=PUW34_11040;product=DUF4034 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2225051 2226412 . + . ID=gene-PUW34_11045;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=PUW34_11045 CP118122.1 Protein Homology CDS 2225051 2226412 . + 0 ID=cds-WJG98979.1;Parent=gene-PUW34_11045;Dbxref=NCBI_GP:WJG98979.1;Name=WJG98979.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=PUW34_11045;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WJG98979.1;transl_table=11 CP118122.1 Genbank pseudogene 2226863 2227035 . + . ID=gene-PUW34_11050;Name=PUW34_11050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11050;pseudo=true CP118122.1 Protein Homology CDS 2226863 2227035 . + 0 ID=cds-PUW34_11050;Parent=gene-PUW34_11050;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=PUW34_11050;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2227051 2227464 . - . ID=gene-PUW34_11055;Name=PUW34_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11055 CP118122.1 Protein Homology CDS 2227051 2227464 . - 0 ID=cds-WJG98799.1;Parent=gene-PUW34_11055;Dbxref=NCBI_GP:WJG98799.1;Name=WJG98799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=PUW34_11055;product=CesT family type III secretion system chaperone;protein_id=WJG98799.1;transl_table=11 CP118122.1 Genbank gene 2227586 2227921 . - . ID=gene-PUW34_11060;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=PUW34_11060 CP118122.1 Protein Homology CDS 2227586 2227921 . - 0 ID=cds-WJG98800.1;Parent=gene-PUW34_11060;Dbxref=NCBI_GP:WJG98800.1;Name=WJG98800.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=PUW34_11060;product=type III secretion system effector SteD;protein_id=WJG98800.1;transl_table=11 CP118122.1 Genbank gene 2228483 2229382 . + . ID=gene-PUW34_11065;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=PUW34_11065 CP118122.1 Protein Homology CDS 2228483 2229382 . + 0 ID=cds-WJG98801.1;Parent=gene-PUW34_11065;Dbxref=NCBI_GP:WJG98801.1;Name=WJG98801.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;gene=yegS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=PUW34_11065;product=lipid kinase YegS;protein_id=WJG98801.1;transl_table=11 CP118122.1 Genbank gene 2229435 2230487 . - . ID=gene-PUW34_11070;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=PUW34_11070 CP118122.1 Protein Homology CDS 2229435 2230487 . - 0 ID=cds-WJG98802.1;Parent=gene-PUW34_11070;Dbxref=NCBI_GP:WJG98802.1;Name=WJG98802.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=PUW34_11070;product=class I fructose-bisphosphate aldolase;protein_id=WJG98802.1;transl_table=11 CP118122.1 Genbank gene 2230741 2232012 . + . ID=gene-PUW34_11075;Name=PUW34_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11075 CP118122.1 Protein Homology CDS 2230741 2232012 . + 0 ID=cds-WJG98803.1;Parent=gene-PUW34_11075;Dbxref=NCBI_GP:WJG98803.1;Name=WJG98803.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=PUW34_11075;product=nucleoside permease;protein_id=WJG98803.1;transl_table=11 CP118122.1 Genbank gene 2232009 2233013 . + . ID=gene-PUW34_11080;Name=PUW34_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11080 CP118122.1 Protein Homology CDS 2232009 2233013 . + 0 ID=cds-WJG98804.1;Parent=gene-PUW34_11080;Dbxref=NCBI_GP:WJG98804.1;Name=WJG98804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=PUW34_11080;product=ADP-ribosylglycohydrolase family protein;protein_id=WJG98804.1;transl_table=11 CP118122.1 Genbank gene 2233010 2233975 . + . ID=gene-PUW34_11085;Name=PUW34_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11085 CP118122.1 Protein Homology CDS 2233010 2233975 . + 0 ID=cds-WJG98805.1;Parent=gene-PUW34_11085;Dbxref=NCBI_GP:WJG98805.1;Name=WJG98805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=PUW34_11085;product=PfkB family carbohydrate kinase;protein_id=WJG98805.1;transl_table=11 CP118122.1 Genbank gene 2233949 2234695 . - . ID=gene-PUW34_11090;Name=PUW34_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11090 CP118122.1 Protein Homology CDS 2233949 2234695 . - 0 ID=cds-WJG98806.1;Parent=gene-PUW34_11090;Dbxref=NCBI_GP:WJG98806.1;Name=WJG98806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=PUW34_11090;product=GntR family transcriptional regulator;protein_id=WJG98806.1;transl_table=11 CP118122.1 Genbank gene 2234731 2235531 . - . ID=gene-PUW34_11095;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=PUW34_11095 CP118122.1 Protein Homology CDS 2234731 2235531 . - 0 ID=cds-WJG98807.1;Parent=gene-PUW34_11095;Dbxref=NCBI_GP:WJG98807.1;Name=WJG98807.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=PUW34_11095;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WJG98807.1;transl_table=11 CP118122.1 Genbank gene 2235518 2236315 . - . ID=gene-PUW34_11100;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=PUW34_11100 CP118122.1 Protein Homology CDS 2235518 2236315 . - 0 ID=cds-WJG98808.1;Parent=gene-PUW34_11100;Dbxref=NCBI_GP:WJG98808.1;Name=WJG98808.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=PUW34_11100;product=hydroxyethylthiazole kinase;protein_id=WJG98808.1;transl_table=11 CP118122.1 cmsearch riboswitch 2236347 2236443 . - . ID=id-CP118122.1:2236347..2236443;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118122.1 Genbank gene 2236725 2237039 . + . ID=gene-PUW34_11105;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=PUW34_11105 CP118122.1 Protein Homology CDS 2236725 2237039 . + 0 ID=cds-WJG98809.1;Parent=gene-PUW34_11105;Dbxref=NCBI_GP:WJG98809.1;Name=WJG98809.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=PUW34_11105;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WJG98809.1;transl_table=11 CP118122.1 Genbank gene 2237083 2238105 . - . ID=gene-PUW34_11110;Name=PUW34_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11110 CP118122.1 Protein Homology CDS 2237083 2238105 . - 0 ID=cds-WJG98810.1;Parent=gene-PUW34_11110;Dbxref=NCBI_GP:WJG98810.1;Name=WJG98810.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=PUW34_11110;product=fimbrial protein;protein_id=WJG98810.1;transl_table=11 CP118122.1 Genbank pseudogene 2238121 2240608 . - . ID=gene-PUW34_11115;Name=PUW34_11115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11115;pseudo=true CP118122.1 Protein Homology CDS 2238121 2240608 . - 0 ID=cds-PUW34_11115;Parent=gene-PUW34_11115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=PUW34_11115;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2240637 2241317 . - . ID=gene-PUW34_11120;Name=PUW34_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11120 CP118122.1 Protein Homology CDS 2240637 2241317 . - 0 ID=cds-WJG98811.1;Parent=gene-PUW34_11120;Dbxref=NCBI_GP:WJG98811.1;Name=WJG98811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=PUW34_11120;product=fimbrial assembly chaperone;protein_id=WJG98811.1;transl_table=11 CP118122.1 Genbank gene 2241379 2241912 . - . ID=gene-PUW34_11125;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=PUW34_11125 CP118122.1 Protein Homology CDS 2241379 2241912 . - 0 ID=cds-WJG98812.1;Parent=gene-PUW34_11125;Dbxref=NCBI_GP:WJG98812.1;Name=WJG98812.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=PUW34_11125;product=fimbrial protein YehD;protein_id=WJG98812.1;transl_table=11 CP118122.1 Genbank gene 2242190 2242471 . - . ID=gene-PUW34_11130;Name=PUW34_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11130 CP118122.1 Protein Homology CDS 2242190 2242471 . - 0 ID=cds-WJG98813.1;Parent=gene-PUW34_11130;Dbxref=NCBI_GP:WJG98813.1;Name=WJG98813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=PUW34_11130;product=YehE family protein;protein_id=WJG98813.1;transl_table=11 CP118122.1 Genbank gene 2242748 2243857 . - . ID=gene-PUW34_11135;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=PUW34_11135 CP118122.1 Protein Homology CDS 2242748 2243857 . - 0 ID=cds-WJG98814.1;Parent=gene-PUW34_11135;Dbxref=NCBI_GP:WJG98814.1;Name=WJG98814.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=PUW34_11135;product=iron-sulfur cluster carrier protein ApbC;protein_id=WJG98814.1;transl_table=11 CP118122.1 Genbank gene 2244022 2246055 . + . ID=gene-PUW34_11140;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=PUW34_11140 CP118122.1 Protein Homology CDS 2244022 2246055 . + 0 ID=cds-WJG98815.1;Parent=gene-PUW34_11140;Dbxref=NCBI_GP:WJG98815.1;Name=WJG98815.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=PUW34_11140;product=methionine--tRNA ligase;protein_id=WJG98815.1;transl_table=11 CP118122.1 Genbank gene 2246296 2246754 . + . ID=gene-PUW34_11145;Name=PUW34_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11145 CP118122.1 Protein Homology CDS 2246296 2246754 . + 0 ID=cds-WJG98816.1;Parent=gene-PUW34_11145;Dbxref=NCBI_GP:WJG98816.1;Name=WJG98816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=PUW34_11145;product=YehR family lipoprotein;protein_id=WJG98816.1;transl_table=11 CP118122.1 Genbank pseudogene 2246926 2247454 . + . ID=gene-PUW34_11150;Name=PUW34_11150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11150;pseudo=true CP118122.1 Protein Homology CDS 2246926 2247454 . + 0 ID=cds-PUW34_11150;Parent=gene-PUW34_11150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=PUW34_11150;product=YehR family lipoprotein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2247511 2247978 . - . ID=gene-PUW34_11155;Name=PUW34_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11155 CP118122.1 Protein Homology CDS 2247511 2247978 . - 0 ID=cds-WJG98817.1;Parent=gene-PUW34_11155;Dbxref=NCBI_GP:WJG98817.1;Name=WJG98817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=PUW34_11155;product=DUF1456 family protein;protein_id=WJG98817.1;transl_table=11 CP118122.1 Genbank gene 2248025 2248744 . - . ID=gene-PUW34_11160;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=PUW34_11160 CP118122.1 Protein Homology CDS 2248025 2248744 . - 0 ID=cds-WJG98818.1;Parent=gene-PUW34_11160;Dbxref=NCBI_GP:WJG98818.1;Name=WJG98818.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=PUW34_11160;product=two-component system response regulator BtsR;protein_id=WJG98818.1;transl_table=11 CP118122.1 Genbank gene 2248741 2250426 . - . ID=gene-PUW34_11165;Name=PUW34_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11165 CP118122.1 Protein Homology CDS 2248741 2250426 . - 0 ID=cds-WJG98819.1;Parent=gene-PUW34_11165;Dbxref=NCBI_GP:WJG98819.1;Name=WJG98819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=PUW34_11165;product=sensor histidine kinase;protein_id=WJG98819.1;transl_table=11 CP118122.1 Genbank gene 2250649 2251380 . + . ID=gene-PUW34_11170;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=PUW34_11170 CP118122.1 Protein Homology CDS 2250649 2251380 . + 0 ID=cds-WJG98820.1;Parent=gene-PUW34_11170;Dbxref=NCBI_GP:WJG98820.1;Name=WJG98820.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=PUW34_11170;product=HTH-type transcriptional regulator MlrA;protein_id=WJG98820.1;transl_table=11 CP118122.1 Genbank gene 2251440 2251547 . + . ID=gene-PUW34_11175;Name=PUW34_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11175 CP118122.1 Protein Homology CDS 2251440 2251547 . + 0 ID=cds-WJG98821.1;Parent=gene-PUW34_11175;Dbxref=NCBI_GP:WJG98821.1;Name=WJG98821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=PUW34_11175;product=protein YohO;protein_id=WJG98821.1;transl_table=11 CP118122.1 Genbank gene 2251528 2252259 . - . ID=gene-PUW34_11180;Name=PUW34_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11180 CP118122.1 Protein Homology CDS 2251528 2252259 . - 0 ID=cds-WJG98822.1;Parent=gene-PUW34_11180;Dbxref=NCBI_GP:WJG98822.1;Name=WJG98822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=PUW34_11180;product=ABC transporter permease;protein_id=WJG98822.1;transl_table=11 CP118122.1 Genbank gene 2252243 2253190 . - . ID=gene-PUW34_11185;Name=PUW34_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11185 CP118122.1 Protein Homology CDS 2252243 2253190 . - 0 ID=cds-WJG98823.1;Parent=gene-PUW34_11185;Dbxref=NCBI_GP:WJG98823.1;Name=WJG98823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=PUW34_11185;product=ABC transporter ATP-binding protein;protein_id=WJG98823.1;transl_table=11 CP118122.1 Genbank gene 2253183 2254352 . - . ID=gene-PUW34_11190;Name=PUW34_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11190 CP118122.1 Protein Homology CDS 2253183 2254352 . - 0 ID=cds-WJG98824.1;Parent=gene-PUW34_11190;Dbxref=NCBI_GP:WJG98824.1;Name=WJG98824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=PUW34_11190;product=ABC transporter permease;protein_id=WJG98824.1;transl_table=11 CP118122.1 Genbank gene 2254356 2255273 . - . ID=gene-PUW34_11195;Name=PUW34_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11195 CP118122.1 Protein Homology CDS 2254356 2255273 . - 0 ID=cds-WJG98825.1;Parent=gene-PUW34_11195;Dbxref=NCBI_GP:WJG98825.1;Name=WJG98825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=PUW34_11195;product=ABC transporter substrate-binding protein;protein_id=WJG98825.1;transl_table=11 CP118122.1 Genbank gene 2255454 2257751 . - . ID=gene-PUW34_11200;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=PUW34_11200 CP118122.1 Protein Homology CDS 2255454 2257751 . - 0 ID=cds-WJG98826.1;Parent=gene-PUW34_11200;Dbxref=NCBI_GP:WJG98826.1;Name=WJG98826.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=PUW34_11200;product=beta-glucosidase BglX;protein_id=WJG98826.1;transl_table=11 CP118122.1 Genbank gene 2258018 2259748 . + . ID=gene-PUW34_11205;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=PUW34_11205 CP118122.1 Protein Homology CDS 2258018 2259748 . + 0 ID=cds-WJG98827.1;Parent=gene-PUW34_11205;Dbxref=NCBI_GP:WJG98827.1;Name=WJG98827.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=PUW34_11205;product=D-lactate dehydrogenase;protein_id=WJG98827.1;transl_table=11 CP118122.1 Genbank gene 2259807 2260754 . - . ID=gene-PUW34_11210;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=PUW34_11210 CP118122.1 Protein Homology CDS 2259807 2260754 . - 0 ID=cds-WJG98828.1;Parent=gene-PUW34_11210;Dbxref=NCBI_GP:WJG98828.1;Name=WJG98828.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=PUW34_11210;product=D-alanyl-D-alanine endopeptidase;protein_id=WJG98828.1;transl_table=11 CP118122.1 Genbank gene 2260920 2261507 . - . ID=gene-PUW34_11215;Name=PUW34_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11215 CP118122.1 Protein Homology CDS 2260920 2261507 . - 0 ID=cds-WJG98829.1;Parent=gene-PUW34_11215;Dbxref=NCBI_GP:WJG98829.1;Name=WJG98829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=PUW34_11215;product=Yip1 family protein;protein_id=WJG98829.1;transl_table=11 CP118122.1 Genbank gene 2261666 2262235 . + . ID=gene-PUW34_11220;Name=PUW34_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11220 CP118122.1 Protein Homology CDS 2261666 2262235 . + 0 ID=cds-WJG98830.1;Parent=gene-PUW34_11220;Dbxref=NCBI_GP:WJG98830.1;Name=WJG98830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=PUW34_11220;product=DedA family protein;protein_id=WJG98830.1;transl_table=11 CP118122.1 Genbank pseudogene 2262284 2263046 . - . ID=gene-PUW34_11225;Name=PUW34_11225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11225;pseudo=true CP118122.1 Protein Homology CDS 2262284 2263046 . - 0 ID=cds-PUW34_11225;Parent=gene-PUW34_11225;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=PUW34_11225;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2263112 2264548 . - . ID=gene-PUW34_11230;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=PUW34_11230 CP118122.1 Protein Homology CDS 2263112 2264548 . - 0 ID=cds-WJG98831.1;Parent=gene-PUW34_11230;Dbxref=NCBI_GP:WJG98831.1;Name=WJG98831.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=PUW34_11230;product=multidrug resistance outer membrane protein MdtQ;protein_id=WJG98831.1;transl_table=11 CP118122.1 Genbank gene 2264866 2264949 . + . ID=gene-PUW34_11235;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=PUW34_11235 CP118122.1 Protein Homology CDS 2264866 2264949 . + 0 ID=cds-WJG98980.1;Parent=gene-PUW34_11235;Dbxref=NCBI_GP:WJG98980.1;Name=WJG98980.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=PUW34_11235;product=small membrane protein YohP;protein_id=WJG98980.1;transl_table=11 CP118122.1 Genbank gene 2265007 2265945 . - . ID=gene-PUW34_11240;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=PUW34_11240 CP118122.1 Protein Homology CDS 2265007 2265945 . - 0 ID=cds-WJG98832.1;Parent=gene-PUW34_11240;Dbxref=NCBI_GP:WJG98832.1;Name=WJG98832.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=PUW34_11240;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WJG98832.1;transl_table=11 CP118122.1 Genbank gene 2266054 2267247 . - . ID=gene-PUW34_11245;Name=PUW34_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11245 CP118122.1 Protein Homology CDS 2266054 2267247 . - 0 ID=cds-WJG98833.1;Parent=gene-PUW34_11245;Dbxref=NCBI_GP:WJG98833.1;Name=WJG98833.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=PUW34_11245;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WJG98833.1;transl_table=11 CP118122.1 Genbank gene 2267262 2267906 . - . ID=gene-PUW34_11250;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=PUW34_11250 CP118122.1 Protein Homology CDS 2267262 2267906 . - 0 ID=cds-WJG98834.1;Parent=gene-PUW34_11250;Dbxref=NCBI_GP:WJG98834.1;Name=WJG98834.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=PUW34_11250;product=maleylacetoacetate isomerase;protein_id=WJG98834.1;transl_table=11 CP118122.1 Genbank gene 2267915 2268616 . - . ID=gene-PUW34_11255;Name=PUW34_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11255 CP118122.1 Protein Homology CDS 2267915 2268616 . - 0 ID=cds-WJG98835.1;Parent=gene-PUW34_11255;Dbxref=NCBI_GP:WJG98835.1;Name=WJG98835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=PUW34_11255;product=fumarylacetoacetate hydrolase family protein;protein_id=WJG98835.1;transl_table=11 CP118122.1 Genbank gene 2268632 2269669 . - . ID=gene-PUW34_11260;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=PUW34_11260 CP118122.1 Protein Homology CDS 2268632 2269669 . - 0 ID=cds-WJG98836.1;Parent=gene-PUW34_11260;Dbxref=NCBI_GP:WJG98836.1;Name=WJG98836.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=PUW34_11260;product=gentisate 1%2C2-dioxygenase;protein_id=WJG98836.1;transl_table=11 CP118122.1 Genbank gene 2269681 2271039 . - . ID=gene-PUW34_11265;Name=PUW34_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11265 CP118122.1 Protein Homology CDS 2269681 2271039 . - 0 ID=cds-WJG98837.1;Parent=gene-PUW34_11265;Dbxref=NCBI_GP:WJG98837.1;Name=WJG98837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=PUW34_11265;product=aromatic acid/H+ symport family MFS transporter;protein_id=WJG98837.1;transl_table=11 CP118122.1 Genbank gene 2271165 2272022 . + . ID=gene-PUW34_11270;Name=PUW34_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11270 CP118122.1 Protein Homology CDS 2271165 2272022 . + 0 ID=cds-WJG98838.1;Parent=gene-PUW34_11270;Dbxref=NCBI_GP:WJG98838.1;Name=WJG98838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024655.1;locus_tag=PUW34_11270;product=LysR family transcriptional regulator;protein_id=WJG98838.1;transl_table=11 CP118122.1 Genbank gene 2272066 2272464 . + . ID=gene-PUW34_11275;Name=PUW34_11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11275 CP118122.1 Protein Homology CDS 2272066 2272464 . + 0 ID=cds-WJG98839.1;Parent=gene-PUW34_11275;Dbxref=NCBI_GP:WJG98839.1;Name=WJG98839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=PUW34_11275;product=CidA/LrgA family protein;protein_id=WJG98839.1;transl_table=11 CP118122.1 Genbank gene 2272461 2273156 . + . ID=gene-PUW34_11280;Name=PUW34_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11280 CP118122.1 Protein Homology CDS 2272461 2273156 . + 0 ID=cds-WJG98840.1;Parent=gene-PUW34_11280;Dbxref=NCBI_GP:WJG98840.1;Name=WJG98840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=PUW34_11280;product=CidB/LrgB family autolysis modulator;protein_id=WJG98840.1;transl_table=11 CP118122.1 Genbank gene 2273310 2274194 . + . ID=gene-PUW34_11285;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=PUW34_11285 CP118122.1 Protein Homology CDS 2273310 2274194 . + 0 ID=cds-WJG98841.1;Parent=gene-PUW34_11285;Dbxref=NCBI_GP:WJG98841.1;Name=WJG98841.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=PUW34_11285;product=cytidine deaminase;protein_id=WJG98841.1;transl_table=11 CP118122.1 Genbank gene 2274371 2275090 . + . ID=gene-PUW34_11290;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=PUW34_11290 CP118122.1 Protein Homology CDS 2274371 2275090 . + 0 ID=cds-WJG98842.1;Parent=gene-PUW34_11290;Dbxref=NCBI_GP:WJG98842.1;Name=WJG98842.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=PUW34_11290;product=outer membrane permeability protein SanA;protein_id=WJG98842.1;transl_table=11 CP118122.1 Genbank gene 2275087 2275332 . + . ID=gene-PUW34_11295;Name=PUW34_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11295 CP118122.1 Protein Homology CDS 2275087 2275332 . + 0 ID=cds-WJG98843.1;Parent=gene-PUW34_11295;Dbxref=NCBI_GP:WJG98843.1;Name=WJG98843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=PUW34_11295;product=DUF2542 family protein;protein_id=WJG98843.1;transl_table=11 CP118122.1 Genbank gene 2275537 2276778 . + . ID=gene-PUW34_11300;Name=PUW34_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11300 CP118122.1 Protein Homology CDS 2275537 2276778 . + 0 ID=cds-WJG98844.1;Parent=gene-PUW34_11300;Dbxref=NCBI_GP:WJG98844.1;Name=WJG98844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=PUW34_11300;product=NAD(P)-dependent oxidoreductase;protein_id=WJG98844.1;transl_table=11 CP118122.1 Genbank gene 2276772 2278007 . + . ID=gene-PUW34_11305;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=PUW34_11305 CP118122.1 Protein Homology CDS 2276772 2278007 . + 0 ID=cds-WJG98845.1;Parent=gene-PUW34_11305;Dbxref=NCBI_GP:WJG98845.1;Name=WJG98845.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=PUW34_11305;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WJG98845.1;transl_table=11 CP118122.1 Genbank gene 2278082 2279092 . - . ID=gene-PUW34_11310;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=PUW34_11310 CP118122.1 Protein Homology CDS 2278082 2279092 . - 0 ID=cds-WJG98846.1;Parent=gene-PUW34_11310;Dbxref=NCBI_GP:WJG98846.1;Name=WJG98846.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=PUW34_11310;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WJG98846.1;transl_table=11 CP118122.1 Genbank pseudogene 2279108 2280626 . - . ID=gene-PUW34_11315;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=pseudogene;locus_tag=PUW34_11315;pseudo=true CP118122.1 Protein Homology CDS 2279108 2280626 . - 0 ID=cds-PUW34_11315;Parent=gene-PUW34_11315;Note=frameshifted;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=PUW34_11315;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2280760 2281758 . - . ID=gene-PUW34_11320;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=PUW34_11320 CP118122.1 Protein Homology CDS 2280760 2281758 . - 0 ID=cds-WJG98847.1;Parent=gene-PUW34_11320;Dbxref=NCBI_GP:WJG98847.1;Name=WJG98847.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=PUW34_11320;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WJG98847.1;transl_table=11 CP118122.1 Genbank gene 2282257 2283279 . - . ID=gene-PUW34_11325;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=PUW34_11325 CP118122.1 Protein Homology CDS 2282257 2283279 . - 0 ID=cds-WJG98848.1;Parent=gene-PUW34_11325;Dbxref=NCBI_GP:WJG98848.1;Name=WJG98848.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=PUW34_11325;product=HTH-type transcriptional regulator GalS;protein_id=WJG98848.1;transl_table=11 CP118122.1 Genbank gene 2283429 2284571 . - . ID=gene-PUW34_11330;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=PUW34_11330 CP118122.1 Protein Homology CDS 2283429 2284571 . - 0 ID=cds-WJG98849.1;Parent=gene-PUW34_11330;Dbxref=NCBI_GP:WJG98849.1;Name=WJG98849.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=PUW34_11330;product=DUF418 domain-containing protein YeiB;protein_id=WJG98849.1;transl_table=11 CP118122.1 Genbank gene 2284586 2285254 . - . ID=gene-PUW34_11335;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=PUW34_11335 CP118122.1 Protein Homology CDS 2284586 2285254 . - 0 ID=cds-WJG98850.1;Parent=gene-PUW34_11335;Dbxref=NCBI_GP:WJG98850.1;Name=WJG98850.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=PUW34_11335;product=GTP cyclohydrolase I FolE;protein_id=WJG98850.1;transl_table=11 CP118122.1 Genbank gene 2285584 2286441 . + . ID=gene-PUW34_11340;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=PUW34_11340 CP118122.1 Protein Homology CDS 2285584 2286441 . + 0 ID=cds-WJG98851.1;Parent=gene-PUW34_11340;Dbxref=NCBI_GP:WJG98851.1;Name=WJG98851.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=PUW34_11340;product=S-formylglutathione hydrolase;protein_id=WJG98851.1;transl_table=11 CP118122.1 Genbank gene 2286430 2286819 . - . ID=gene-PUW34_11345;Name=PUW34_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11345 CP118122.1 Protein Homology CDS 2286430 2286819 . - 0 ID=cds-WJG98852.1;Parent=gene-PUW34_11345;Dbxref=NCBI_GP:WJG98852.1;Name=WJG98852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=PUW34_11345;product=helix-turn-helix transcriptional regulator;protein_id=WJG98852.1;transl_table=11 CP118122.1 Genbank gene 2286824 2288191 . - . ID=gene-PUW34_11350;Name=PUW34_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11350 CP118122.1 Protein Homology CDS 2286824 2288191 . - 0 ID=cds-WJG98853.1;Parent=gene-PUW34_11350;Dbxref=NCBI_GP:WJG98853.1;Name=WJG98853.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=PUW34_11350;product=L-serine ammonia-lyase;protein_id=WJG98853.1;transl_table=11 CP118122.1 Genbank gene 2288408 2289295 . + . ID=gene-PUW34_11355;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PUW34_11355 CP118122.1 Protein Homology CDS 2288408 2289295 . + 0 ID=cds-WJG98854.1;Parent=gene-PUW34_11355;Dbxref=NCBI_GP:WJG98854.1;Name=WJG98854.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=PUW34_11355;product=phosphoserine phosphatase SerB;protein_id=WJG98854.1;transl_table=11 CP118122.1 Genbank pseudogene 2289328 2290648 . + . ID=gene-PUW34_11360;Name=PUW34_11360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11360;pseudo=true CP118122.1 Protein Homology CDS 2289328 2290648 . + 0 ID=cds-PUW34_11360;Parent=gene-PUW34_11360;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=PUW34_11360;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2290692 2292682 . - . ID=gene-PUW34_11365;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=pseudogene;locus_tag=PUW34_11365;pseudo=true CP118122.1 Protein Homology CDS 2290692 2292682 . - 0 ID=cds-PUW34_11365;Parent=gene-PUW34_11365;Note=frameshifted;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=PUW34_11365;product=catecholate siderophore receptor CirA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2293028 2294497 . - . ID=gene-PUW34_11370;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=PUW34_11370 CP118122.1 Protein Homology CDS 2293028 2294497 . - 0 ID=cds-WJG98855.1;Parent=gene-PUW34_11370;Dbxref=NCBI_GP:WJG98855.1;Name=WJG98855.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=PUW34_11370;product=lysine-specific permease;protein_id=WJG98855.1;transl_table=11 CP118122.1 Genbank gene 2294687 2295550 . - . ID=gene-PUW34_11375;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=PUW34_11375 CP118122.1 Protein Homology CDS 2294687 2295550 . - 0 ID=cds-WJG98856.1;Parent=gene-PUW34_11375;Dbxref=NCBI_GP:WJG98856.1;Name=WJG98856.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=PUW34_11375;product=DNA-binding transcriptional regulator YeiE;protein_id=WJG98856.1;transl_table=11 CP118122.1 Genbank gene 2295671 2296720 . + . ID=gene-PUW34_11380;Name=PUW34_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11380 CP118122.1 Protein Homology CDS 2295671 2296720 . + 0 ID=cds-WJG98857.1;Parent=gene-PUW34_11380;Dbxref=NCBI_GP:WJG98857.1;Name=WJG98857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=PUW34_11380;product=YeiH family protein;protein_id=WJG98857.1;transl_table=11 CP118122.1 Genbank gene 2296799 2297656 . + . ID=gene-PUW34_11385;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=PUW34_11385 CP118122.1 Protein Homology CDS 2296799 2297656 . + 0 ID=cds-WJG98858.1;Parent=gene-PUW34_11385;Dbxref=NCBI_GP:WJG98858.1;Name=WJG98858.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=PUW34_11385;product=deoxyribonuclease IV;protein_id=WJG98858.1;transl_table=11 CP118122.1 Genbank gene 2297721 2299409 . - . ID=gene-PUW34_11390;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=PUW34_11390 CP118122.1 Protein Homology CDS 2297721 2299409 . - 0 ID=cds-WJG98859.1;Parent=gene-PUW34_11390;Dbxref=NCBI_GP:WJG98859.1;Name=WJG98859.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=PUW34_11390;product=PTS fructose transporter subunit IIBC;protein_id=WJG98859.1;transl_table=11 CP118122.1 Genbank gene 2299426 2300364 . - . ID=gene-PUW34_11395;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=PUW34_11395 CP118122.1 Protein Homology CDS 2299426 2300364 . - 0 ID=cds-WJG98860.1;Parent=gene-PUW34_11395;Dbxref=NCBI_GP:WJG98860.1;Name=WJG98860.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=PUW34_11395;product=1-phosphofructokinase;protein_id=WJG98860.1;transl_table=11 CP118122.1 Genbank pseudogene 2300364 2301493 . - . ID=gene-PUW34_11400;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=pseudogene;locus_tag=PUW34_11400;pseudo=true CP118122.1 Protein Homology CDS 2300364 2301493 . - 0 ID=cds-PUW34_11400;Parent=gene-PUW34_11400;Note=frameshifted;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=PUW34_11400;product=fused PTS fructose transporter subunit IIA/HPr protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2301862 2303043 . + . ID=gene-PUW34_11405;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=PUW34_11405 CP118122.1 Protein Homology CDS 2301862 2303043 . + 0 ID=cds-WJG98861.1;Parent=gene-PUW34_11405;Dbxref=NCBI_GP:WJG98861.1;Name=WJG98861.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=PUW34_11405;product=sugar efflux transporter SetB;protein_id=WJG98861.1;transl_table=11 CP118122.1 Genbank gene 2303107 2303772 . - . ID=gene-PUW34_11410;Name=PUW34_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11410 CP118122.1 Protein Homology CDS 2303107 2303772 . - 0 ID=cds-WJG98862.1;Parent=gene-PUW34_11410;Dbxref=NCBI_GP:WJG98862.1;Name=WJG98862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=PUW34_11410;product=GNVR domain-containing protein;protein_id=WJG98862.1;transl_table=11 CP118122.1 Genbank gene 2303774 2303896 . - . ID=gene-PUW34_11415;Name=PUW34_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11415 CP118122.1 Protein Homology CDS 2303774 2303896 . - 0 ID=cds-WJG98863.1;Parent=gene-PUW34_11415;Dbxref=NCBI_GP:WJG98863.1;Name=WJG98863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=PUW34_11415;product=hypothetical protein;protein_id=WJG98863.1;transl_table=11 CP118122.1 Genbank pseudogene 2304284 2304539 . - . ID=gene-PUW34_11420;Name=PUW34_11420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11420;pseudo=true CP118122.1 Protein Homology CDS 2304284 2304539 . - 0 ID=cds-PUW34_11420;Parent=gene-PUW34_11420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=PUW34_11420;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2304864 2305436 . + . ID=gene-PUW34_11425;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=PUW34_11425 CP118122.1 Protein Homology CDS 2304864 2305436 . + 0 ID=cds-WJG98864.1;Parent=gene-PUW34_11425;Dbxref=NCBI_GP:WJG98864.1;Name=WJG98864.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=PUW34_11425;product=elongation factor P-like protein YeiP;protein_id=WJG98864.1;transl_table=11 CP118122.1 Genbank gene 2305649 2306635 . + . ID=gene-PUW34_11430;Name=PUW34_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11430 CP118122.1 Protein Homology CDS 2305649 2306635 . + 0 ID=cds-WJG98865.1;Parent=gene-PUW34_11430;Dbxref=NCBI_GP:WJG98865.1;Name=WJG98865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=PUW34_11430;product=GTP-binding protein;protein_id=WJG98865.1;transl_table=11 CP118122.1 Genbank gene 2306665 2307384 . + . ID=gene-PUW34_11435;Name=PUW34_11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11435 CP118122.1 Protein Homology CDS 2306665 2307384 . + 0 ID=cds-WJG98866.1;Parent=gene-PUW34_11435;Dbxref=NCBI_GP:WJG98866.1;Name=WJG98866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=PUW34_11435;product=phosphatase PAP2 family protein;protein_id=WJG98866.1;transl_table=11 CP118122.1 Genbank gene 2307798 2308370 . + . ID=gene-PUW34_11440;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=PUW34_11440 CP118122.1 Protein Homology CDS 2307798 2308370 . + 0 ID=cds-WJG98867.1;Parent=gene-PUW34_11440;Dbxref=NCBI_GP:WJG98867.1;Name=WJG98867.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=PUW34_11440;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WJG98867.1;transl_table=11 CP118122.1 Genbank pseudogene 2308696 2310252 . + . ID=gene-PUW34_11445;Name=PUW34_11445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11445;pseudo=true CP118122.1 Protein Homology CDS 2308696 2310252 . + 0 ID=cds-PUW34_11445;Parent=gene-PUW34_11445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=PUW34_11445;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2310359 2312164 . + . ID=gene-PUW34_11450;Name=PUW34_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11450 CP118122.1 Protein Homology CDS 2310359 2312164 . + 0 ID=cds-WJG98868.1;Parent=gene-PUW34_11450;Dbxref=NCBI_GP:WJG98868.1;Name=WJG98868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=PUW34_11450;product=extracellular solute-binding protein;protein_id=WJG98868.1;transl_table=11 CP118122.1 Genbank gene 2312174 2313268 . + . ID=gene-PUW34_11455;Name=PUW34_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11455 CP118122.1 Protein Homology CDS 2312174 2313268 . + 0 ID=cds-WJG98869.1;Parent=gene-PUW34_11455;Dbxref=NCBI_GP:WJG98869.1;Name=WJG98869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=PUW34_11455;product=microcin C ABC transporter permease YejB;protein_id=WJG98869.1;transl_table=11 CP118122.1 Genbank gene 2313268 2314293 . + . ID=gene-PUW34_11460;Name=PUW34_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11460 CP118122.1 Protein Homology CDS 2313268 2314293 . + 0 ID=cds-WJG98870.1;Parent=gene-PUW34_11460;Dbxref=NCBI_GP:WJG98870.1;Name=WJG98870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=PUW34_11460;product=ABC transporter permease;protein_id=WJG98870.1;transl_table=11 CP118122.1 Genbank gene 2314295 2315884 . + . ID=gene-PUW34_11465;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=PUW34_11465 CP118122.1 Protein Homology CDS 2314295 2315884 . + 0 ID=cds-WJG98871.1;Parent=gene-PUW34_11465;Dbxref=NCBI_GP:WJG98871.1;Name=WJG98871.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=PUW34_11465;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WJG98871.1;transl_table=11 CP118122.1 Genbank gene 2315888 2316232 . - . ID=gene-PUW34_11470;Name=PUW34_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11470 CP118122.1 Protein Homology CDS 2315888 2316232 . - 0 ID=cds-WJG98872.1;Parent=gene-PUW34_11470;Dbxref=NCBI_GP:WJG98872.1;Name=WJG98872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=PUW34_11470;product=YejG family protein;protein_id=WJG98872.1;transl_table=11 CP118122.1 Genbank gene 2316623 2317813 . - . ID=gene-PUW34_11475;Name=PUW34_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11475 CP118122.1 Protein Homology CDS 2316623 2317813 . - 0 ID=cds-WJG98873.1;Parent=gene-PUW34_11475;Dbxref=NCBI_GP:WJG98873.1;Name=WJG98873.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=PUW34_11475;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WJG98873.1;transl_table=11 CP118122.1 Genbank gene 2317841 2318536 . - . ID=gene-PUW34_11480;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=PUW34_11480 CP118122.1 Protein Homology CDS 2317841 2318536 . - 0 ID=cds-WJG98874.1;Parent=gene-PUW34_11480;Dbxref=NCBI_GP:WJG98874.1;Name=WJG98874.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=PUW34_11480;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WJG98874.1;transl_table=11 CP118122.1 Genbank gene 2318688 2320448 . + . ID=gene-PUW34_11485;Name=PUW34_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11485 CP118122.1 Protein Homology CDS 2318688 2320448 . + 0 ID=cds-WJG98875.1;Parent=gene-PUW34_11485;Dbxref=NCBI_GP:WJG98875.1;Name=WJG98875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=PUW34_11485;product=DEAD/DEAH box helicase;protein_id=WJG98875.1;transl_table=11 CP118122.1 Genbank gene 2320573 2320857 . + . ID=gene-PUW34_11490;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=PUW34_11490 CP118122.1 Protein Homology CDS 2320573 2320857 . + 0 ID=cds-WJG98876.1;Parent=gene-PUW34_11490;Dbxref=NCBI_GP:WJG98876.1;Name=WJG98876.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=PUW34_11490;product=50S ribosomal protein L25;protein_id=WJG98876.1;transl_table=11 CP118122.1 Genbank gene 2320965 2321585 . - . ID=gene-PUW34_11495;Name=PUW34_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11495 CP118122.1 Protein Homology CDS 2320965 2321585 . - 0 ID=cds-WJG98877.1;Parent=gene-PUW34_11495;Dbxref=NCBI_GP:WJG98877.1;Name=WJG98877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=PUW34_11495;product=hypothetical protein;protein_id=WJG98877.1;transl_table=11 CP118122.1 Genbank gene 2321613 2322620 . - . ID=gene-PUW34_11500;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=PUW34_11500 CP118122.1 Protein Homology CDS 2321613 2322620 . - 0 ID=cds-WJG98878.1;Parent=gene-PUW34_11500;Dbxref=NCBI_GP:WJG98878.1;Name=WJG98878.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=PUW34_11500;product=nucleoid-associated protein YejK;protein_id=WJG98878.1;transl_table=11 CP118122.1 Genbank gene 2322800 2323027 . + . ID=gene-PUW34_11505;Name=PUW34_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11505 CP118122.1 Protein Homology CDS 2322800 2323027 . + 0 ID=cds-WJG98879.1;Parent=gene-PUW34_11505;Dbxref=NCBI_GP:WJG98879.1;Name=WJG98879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=PUW34_11505;product=YejL family protein;protein_id=WJG98879.1;transl_table=11 CP118122.1 Genbank gene 2323059 2324819 . + . ID=gene-PUW34_11510;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=PUW34_11510 CP118122.1 Protein Homology CDS 2323059 2324819 . + 0 ID=cds-WJG98880.1;Parent=gene-PUW34_11510;Dbxref=NCBI_GP:WJG98880.1;Name=WJG98880.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=PUW34_11510;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WJG98880.1;transl_table=11 CP118122.1 Genbank gene 2324893 2324969 . + . ID=gene-PUW34_11515;Name=PUW34_11515;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_11515 CP118122.1 tRNAscan-SE tRNA 2324893 2324969 . + . ID=rna-PUW34_11515;Parent=gene-PUW34_11515;anticodon=(pos:2324927..2324929);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_11515;product=tRNA-Pro CP118122.1 tRNAscan-SE exon 2324893 2324969 . + . ID=exon-PUW34_11515-1;Parent=rna-PUW34_11515;anticodon=(pos:2324927..2324929);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_11515;product=tRNA-Pro CP118122.1 Genbank pseudogene 2324925 2325023 . + . ID=gene-PUW34_11520;Name=PUW34_11520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11520;pseudo=true CP118122.1 Protein Homology CDS 2324925 2325023 . + 0 ID=cds-PUW34_11520;Parent=gene-PUW34_11520;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=PUW34_11520;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2325280 2325577 . - . ID=gene-PUW34_11525;Name=PUW34_11525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11525;pseudo=true CP118122.1 Protein Homology CDS 2325280 2325577 . - 0 ID=cds-PUW34_11525;Parent=gene-PUW34_11525;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457662.1;locus_tag=PUW34_11525;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2325590 2326402 . - . ID=gene-PUW34_11530;Name=PUW34_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11530 CP118122.1 Protein Homology CDS 2325590 2326402 . - 0 ID=cds-WJG98881.1;Parent=gene-PUW34_11530;Dbxref=NCBI_GP:WJG98881.1;Name=WJG98881.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: protein motif:HMM:NF025849.2;locus_tag=PUW34_11530;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WJG98881.1;transl_table=11 CP118122.1 Genbank gene 2326383 2327375 . - . ID=gene-PUW34_11535;Name=PUW34_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11535 CP118122.1 GeneMarkS-2+ CDS 2326383 2327375 . - 0 ID=cds-WJG98882.1;Parent=gene-PUW34_11535;Dbxref=NCBI_GP:WJG98882.1;Name=WJG98882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_11535;product=hypothetical protein;protein_id=WJG98882.1;transl_table=11 CP118122.1 Genbank pseudogene 2327592 2327957 . - . ID=gene-PUW34_11540;Name=PUW34_11540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11540;pseudo=true CP118122.1 Protein Homology CDS 2327592 2327957 . - 0 ID=cds-PUW34_11540;Parent=gene-PUW34_11540;Note=secreted by salmonella pathogenicity island 2%3B involved in survival of Salmonella in host cells%3B interferes with host cell ubiquination pathway%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460026.1;locus_tag=PUW34_11540;product=E3 ubiquitin--protein ligase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2328126 2328329 . - . ID=gene-PUW34_11545;Name=PUW34_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11545 CP118122.1 Protein Homology CDS 2328126 2328329 . - 0 ID=cds-WJG98883.1;Parent=gene-PUW34_11545;Dbxref=NCBI_GP:WJG98883.1;Name=WJG98883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461185.1;locus_tag=PUW34_11545;product=phage tail protein;protein_id=WJG98883.1;transl_table=11 CP118122.1 Genbank pseudogene 2328625 2329416 . - . ID=gene-PUW34_11550;Name=PUW34_11550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11550;pseudo=true CP118122.1 Protein Homology CDS 2328625 2329416 . - 0 ID=cds-PUW34_11550;Parent=gene-PUW34_11550;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461186.1;locus_tag=PUW34_11550;product=tail fiber protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2329532 2329690 . + . ID=gene-PUW34_11555;Name=PUW34_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11555 CP118122.1 GeneMarkS-2+ CDS 2329532 2329690 . + 0 ID=cds-WJG95275.1;Parent=gene-PUW34_11555;Dbxref=NCBI_GP:WJG95275.1;Name=WJG95275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_11555;product=hypothetical protein;protein_id=WJG95275.1;transl_table=11 CP118122.1 Genbank gene 2329719 2329922 . + . ID=gene-PUW34_11560;Name=PUW34_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11560 CP118122.1 Protein Homology CDS 2329719 2329922 . + 0 ID=cds-WJG98981.1;Parent=gene-PUW34_11560;Dbxref=NCBI_GP:WJG98981.1;Name=WJG98981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=PUW34_11560;product=DinI-like family protein;protein_id=WJG98981.1;transl_table=11 CP118122.1 Genbank gene 2330114 2330677 . - . ID=gene-PUW34_11565;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=PUW34_11565 CP118122.1 Protein Homology CDS 2330114 2330677 . - 0 ID=cds-WJG95276.1;Parent=gene-PUW34_11565;Dbxref=NCBI_GP:WJG95276.1;Name=WJG95276.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=PUW34_11565;product=lipid A 3-O-deacylase PagL;protein_id=WJG95276.1;transl_table=11 CP118122.1 Genbank gene 2331407 2332054 . + . ID=gene-PUW34_11570;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=PUW34_11570 CP118122.1 Protein Homology CDS 2331407 2332054 . + 0 ID=cds-WJG98982.1;Parent=gene-PUW34_11570;Dbxref=NCBI_GP:WJG98982.1;Name=WJG98982.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=PUW34_11570;product=nitrate/nitrite response regulator protein NarP;protein_id=WJG98982.1;transl_table=11 CP118122.1 Genbank gene 2332098 2333150 . - . ID=gene-PUW34_11575;Name=PUW34_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11575 CP118122.1 Protein Homology CDS 2332098 2333150 . - 0 ID=cds-WJG95277.1;Parent=gene-PUW34_11575;Dbxref=NCBI_GP:WJG95277.1;Name=WJG95277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=PUW34_11575;product=cytochrome c-type biogenesis protein CcmH;protein_id=WJG95277.1;transl_table=11 CP118122.1 Genbank gene 2333147 2333704 . - . ID=gene-PUW34_11580;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PUW34_11580 CP118122.1 Protein Homology CDS 2333147 2333704 . - 0 ID=cds-WJG95278.1;Parent=gene-PUW34_11580;Dbxref=NCBI_GP:WJG95278.1;Name=WJG95278.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=PUW34_11580;product=thiol:disulfide interchange protein DsbE;protein_id=WJG95278.1;transl_table=11 CP118122.1 Genbank gene 2333701 2335632 . - . ID=gene-PUW34_11585;Name=PUW34_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11585 CP118122.1 Protein Homology CDS 2333701 2335632 . - 0 ID=cds-WJG95279.1;Parent=gene-PUW34_11585;Dbxref=NCBI_GP:WJG95279.1;Name=WJG95279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=PUW34_11585;product=heme lyase CcmF/NrfE family subunit;protein_id=WJG95279.1;transl_table=11 CP118122.1 Genbank gene 2335629 2336108 . - . ID=gene-PUW34_11590;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PUW34_11590 CP118122.1 Protein Homology CDS 2335629 2336108 . - 0 ID=cds-WJG95280.1;Parent=gene-PUW34_11590;Dbxref=NCBI_GP:WJG95280.1;Name=WJG95280.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=PUW34_11590;product=cytochrome c maturation protein CcmE;protein_id=WJG95280.1;transl_table=11 CP118122.1 Genbank gene 2336105 2336317 . - . ID=gene-PUW34_11595;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PUW34_11595 CP118122.1 Protein Homology CDS 2336105 2336317 . - 0 ID=cds-WJG95281.1;Parent=gene-PUW34_11595;Dbxref=NCBI_GP:WJG95281.1;Name=WJG95281.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=PUW34_11595;product=heme exporter protein CcmD;protein_id=WJG95281.1;transl_table=11 CP118122.1 Genbank gene 2336314 2337051 . - . ID=gene-PUW34_11600;Name=PUW34_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11600 CP118122.1 Protein Homology CDS 2336314 2337051 . - 0 ID=cds-WJG98983.1;Parent=gene-PUW34_11600;Dbxref=NCBI_GP:WJG98983.1;Name=WJG98983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=PUW34_11600;product=heme ABC transporter permease;protein_id=WJG98983.1;transl_table=11 CP118122.1 Genbank gene 2337103 2337762 . - . ID=gene-PUW34_11605;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PUW34_11605 CP118122.1 Protein Homology CDS 2337103 2337762 . - 0 ID=cds-WJG95282.1;Parent=gene-PUW34_11605;Dbxref=NCBI_GP:WJG95282.1;Name=WJG95282.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=PUW34_11605;product=heme exporter protein CcmB;protein_id=WJG95282.1;transl_table=11 CP118122.1 Genbank gene 2337759 2338376 . - . ID=gene-PUW34_11610;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PUW34_11610 CP118122.1 Protein Homology CDS 2337759 2338376 . - 0 ID=cds-WJG95283.1;Parent=gene-PUW34_11610;Dbxref=NCBI_GP:WJG95283.1;Name=WJG95283.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=PUW34_11610;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WJG95283.1;transl_table=11 CP118122.1 Genbank gene 2338397 2338999 . - . ID=gene-PUW34_11615;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=PUW34_11615 CP118122.1 Protein Homology CDS 2338397 2338999 . - 0 ID=cds-WJG95284.1;Parent=gene-PUW34_11615;Dbxref=NCBI_GP:WJG95284.1;Name=WJG95284.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=PUW34_11615;product=cytochrome c-type protein NapC;protein_id=WJG95284.1;transl_table=11 CP118122.1 Genbank gene 2339009 2339458 . - . ID=gene-PUW34_11620;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=PUW34_11620 CP118122.1 Protein Homology CDS 2339009 2339458 . - 0 ID=cds-WJG95285.1;Parent=gene-PUW34_11620;Dbxref=NCBI_GP:WJG95285.1;Name=WJG95285.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=PUW34_11620;product=nitrate reductase cytochrome c-type subunit;protein_id=WJG95285.1;transl_table=11 CP118122.1 Genbank gene 2339574 2340443 . - . ID=gene-PUW34_11625;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=PUW34_11625 CP118122.1 Protein Homology CDS 2339574 2340443 . - 0 ID=cds-WJG95286.1;Parent=gene-PUW34_11625;Dbxref=NCBI_GP:WJG95286.1;Name=WJG95286.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=PUW34_11625;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WJG95286.1;transl_table=11 CP118122.1 Genbank gene 2340430 2341125 . - . ID=gene-PUW34_11630;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=PUW34_11630 CP118122.1 Protein Homology CDS 2340430 2341125 . - 0 ID=cds-WJG95287.1;Parent=gene-PUW34_11630;Dbxref=NCBI_GP:WJG95287.1;Name=WJG95287.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=PUW34_11630;product=ferredoxin-type protein NapG;protein_id=WJG95287.1;transl_table=11 CP118122.1 Genbank gene 2341132 2343618 . - . ID=gene-PUW34_11635;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=PUW34_11635 CP118122.1 Protein Homology CDS 2341132 2343618 . - 0 ID=cds-WJG95288.1;Parent=gene-PUW34_11635;Dbxref=NCBI_GP:WJG95288.1;Name=WJG95288.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=PUW34_11635;product=nitrate reductase catalytic subunit NapA;protein_id=WJG95288.1;transl_table=11 CP118122.1 Genbank gene 2343615 2343878 . - . ID=gene-PUW34_11640;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=PUW34_11640 CP118122.1 Protein Homology CDS 2343615 2343878 . - 0 ID=cds-WJG95289.1;Parent=gene-PUW34_11640;Dbxref=NCBI_GP:WJG95289.1;Name=WJG95289.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=PUW34_11640;product=chaperone NapD;protein_id=WJG95289.1;transl_table=11 CP118122.1 Genbank gene 2343868 2344359 . - . ID=gene-PUW34_11645;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=PUW34_11645 CP118122.1 Protein Homology CDS 2343868 2344359 . - 0 ID=cds-WJG95290.1;Parent=gene-PUW34_11645;Dbxref=NCBI_GP:WJG95290.1;Name=WJG95290.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=PUW34_11645;product=ferredoxin-type protein NapF;protein_id=WJG95290.1;transl_table=11 CP118122.1 Genbank gene 2344773 2345267 . + . ID=gene-PUW34_11650;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=PUW34_11650 CP118122.1 Protein Homology CDS 2344773 2345267 . + 0 ID=cds-WJG98984.1;Parent=gene-PUW34_11650;Dbxref=NCBI_GP:WJG98984.1;Name=WJG98984.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=PUW34_11650;product=serine protease inhibitor ecotin;protein_id=WJG98984.1;transl_table=11 CP118122.1 Genbank gene 2345450 2347093 . - . ID=gene-PUW34_11655;Name=PUW34_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11655 CP118122.1 Protein Homology CDS 2345450 2347093 . - 0 ID=cds-WJG95291.1;Parent=gene-PUW34_11655;Dbxref=NCBI_GP:WJG95291.1;Name=WJG95291.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=PUW34_11655;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WJG95291.1;transl_table=11 CP118122.1 Genbank gene 2347167 2347817 . - . ID=gene-PUW34_11660;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=PUW34_11660 CP118122.1 Protein Homology CDS 2347167 2347817 . - 0 ID=cds-WJG95292.1;Parent=gene-PUW34_11660;Dbxref=NCBI_GP:WJG95292.1;Name=WJG95292.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=PUW34_11660;product=DNA oxidative demethylase AlkB;protein_id=WJG95292.1;transl_table=11 CP118122.1 Genbank gene 2347820 2348881 . - . ID=gene-PUW34_11665;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=PUW34_11665 CP118122.1 Protein Homology CDS 2347820 2348881 . - 0 ID=cds-WJG95293.1;Parent=gene-PUW34_11665;Dbxref=NCBI_GP:WJG95293.1;Name=WJG95293.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=PUW34_11665;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WJG95293.1;transl_table=11 CP118122.1 Genbank pseudogene 2348962 2350012 . - . ID=gene-PUW34_11670;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=pseudogene;locus_tag=PUW34_11670;pseudo=true CP118122.1 Protein Homology CDS 2348962 2350012 . - 0 ID=cds-PUW34_11670;Parent=gene-PUW34_11670;Note=frameshifted;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=PUW34_11670;product=FAD:protein FMN transferase ApbE;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2350127 2351263 . - . ID=gene-PUW34_11675;Name=PUW34_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11675 CP118122.1 Protein Homology CDS 2350127 2351263 . - 0 ID=cds-WJG95294.1;Parent=gene-PUW34_11675;Dbxref=NCBI_GP:WJG95294.1;Name=WJG95294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=PUW34_11675;product=porin OmpC;protein_id=WJG95294.1;transl_table=11 CP118122.1 Genbank gene 2351990 2354659 . + . ID=gene-PUW34_11680;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=PUW34_11680 CP118122.1 Protein Homology CDS 2351990 2354659 . + 0 ID=cds-WJG95295.1;Parent=gene-PUW34_11680;Dbxref=NCBI_GP:WJG95295.1;Name=WJG95295.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=PUW34_11680;product=phosphotransferase RcsD;protein_id=WJG95295.1;transl_table=11 CP118122.1 Genbank gene 2354676 2355326 . + . ID=gene-PUW34_11685;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=PUW34_11685 CP118122.1 Protein Homology CDS 2354676 2355326 . + 0 ID=cds-WJG95296.1;Parent=gene-PUW34_11685;Dbxref=NCBI_GP:WJG95296.1;Name=WJG95296.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=PUW34_11685;product=response regulator transcription factor RcsB;protein_id=WJG95296.1;transl_table=11 CP118122.1 Genbank gene 2355429 2358275 . - . ID=gene-PUW34_11690;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=PUW34_11690 CP118122.1 Protein Homology CDS 2355429 2358275 . - 0 ID=cds-WJG95297.1;Parent=gene-PUW34_11690;Dbxref=NCBI_GP:WJG95297.1;Name=WJG95297.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=PUW34_11690;product=two-component system sensor histidine kinase RcsC;protein_id=WJG95297.1;transl_table=11 CP118122.1 Genbank gene 2358393 2361029 . - . ID=gene-PUW34_11695;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=PUW34_11695 CP118122.1 Protein Homology CDS 2358393 2361029 . - 0 ID=cds-WJG95298.1;Parent=gene-PUW34_11695;Dbxref=NCBI_GP:WJG95298.1;Name=WJG95298.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=PUW34_11695;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WJG95298.1;transl_table=11 CP118122.1 Genbank gene 2361438 2362640 . - . ID=gene-PUW34_11700;Name=PUW34_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11700 CP118122.1 Protein Homology CDS 2361438 2362640 . - 0 ID=cds-WJG95299.1;Parent=gene-PUW34_11700;Dbxref=NCBI_GP:WJG95299.1;Name=WJG95299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=PUW34_11700;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WJG95299.1;transl_table=11 CP118122.1 Genbank pseudogene 2362655 2363979 . - . ID=gene-PUW34_11705;Name=PUW34_11705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_11705;pseudo=true CP118122.1 Protein Homology CDS 2362655 2363979 . - 0 ID=cds-PUW34_11705;Parent=gene-PUW34_11705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=PUW34_11705;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2364029 2364913 . + . ID=gene-PUW34_11710;Name=PUW34_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11710 CP118122.1 Protein Homology CDS 2364029 2364913 . + 0 ID=cds-WJG95300.1;Parent=gene-PUW34_11710;Dbxref=NCBI_GP:WJG95300.1;Name=WJG95300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=PUW34_11710;product=GntR family transcriptional regulator;protein_id=WJG95300.1;transl_table=11 CP118122.1 Genbank gene 2364996 2365724 . + . ID=gene-PUW34_11715;Name=PUW34_11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11715 CP118122.1 Protein Homology CDS 2364996 2365724 . + 0 ID=cds-WJG95301.1;Parent=gene-PUW34_11715;Dbxref=NCBI_GP:WJG95301.1;Name=WJG95301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=PUW34_11715;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WJG95301.1;transl_table=11 CP118122.1 Genbank gene 2366079 2368364 . + . ID=gene-PUW34_11720;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=PUW34_11720 CP118122.1 Protein Homology CDS 2366079 2368364 . + 0 ID=cds-WJG95302.1;Parent=gene-PUW34_11720;Dbxref=NCBI_GP:WJG95302.1;Name=WJG95302.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=PUW34_11720;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WJG95302.1;transl_table=11 CP118122.1 Genbank gene 2368477 2369607 . + . ID=gene-PUW34_11725;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=PUW34_11725 CP118122.1 Protein Homology CDS 2368477 2369607 . + 0 ID=cds-WJG95303.1;Parent=gene-PUW34_11725;Dbxref=NCBI_GP:WJG95303.1;Name=WJG95303.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=PUW34_11725;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WJG95303.1;transl_table=11 CP118122.1 Genbank gene 2369607 2369861 . + . ID=gene-PUW34_11730;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=PUW34_11730 CP118122.1 Protein Homology CDS 2369607 2369861 . + 0 ID=cds-WJG95304.1;Parent=gene-PUW34_11730;Dbxref=NCBI_GP:WJG95304.1;Name=WJG95304.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=PUW34_11730;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WJG95304.1;transl_table=11 CP118122.1 Genbank gene 2369863 2371053 . - . ID=gene-PUW34_11735;Name=PUW34_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11735 CP118122.1 Protein Homology CDS 2369863 2371053 . - 0 ID=cds-WJG95305.1;Parent=gene-PUW34_11735;Dbxref=NCBI_GP:WJG95305.1;Name=WJG95305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=PUW34_11735;product=MFS transporter;protein_id=WJG95305.1;transl_table=11 CP118122.1 Genbank gene 2371215 2372093 . + . ID=gene-PUW34_11740;Name=PUW34_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11740 CP118122.1 Protein Homology CDS 2371215 2372093 . + 0 ID=cds-WJG95306.1;Parent=gene-PUW34_11740;Dbxref=NCBI_GP:WJG95306.1;Name=WJG95306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=PUW34_11740;product=LysR substrate-binding domain-containing protein;protein_id=WJG95306.1;transl_table=11 CP118122.1 Genbank gene 2372209 2373279 . - . ID=gene-PUW34_11745;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=PUW34_11745 CP118122.1 Protein Homology CDS 2372209 2373279 . - 0 ID=cds-WJG95307.1;Parent=gene-PUW34_11745;Dbxref=NCBI_GP:WJG95307.1;Name=WJG95307.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=PUW34_11745;product=glycerophosphodiester phosphodiesterase;protein_id=WJG95307.1;transl_table=11 CP118122.1 Genbank gene 2373284 2374642 . - . ID=gene-PUW34_11750;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=PUW34_11750 CP118122.1 Protein Homology CDS 2373284 2374642 . - 0 ID=cds-WJG95308.1;Parent=gene-PUW34_11750;Dbxref=NCBI_GP:WJG95308.1;Name=WJG95308.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=PUW34_11750;product=glycerol-3-phosphate transporter;protein_id=WJG95308.1;transl_table=11 CP118122.1 Genbank gene 2374915 2376543 . + . ID=gene-PUW34_11755;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=PUW34_11755 CP118122.1 Protein Homology CDS 2374915 2376543 . + 0 ID=cds-WJG95309.1;Parent=gene-PUW34_11755;Dbxref=NCBI_GP:WJG95309.1;Name=WJG95309.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=PUW34_11755;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WJG95309.1;transl_table=11 CP118122.1 Genbank gene 2376533 2377792 . + . ID=gene-PUW34_11760;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=PUW34_11760 CP118122.1 Protein Homology CDS 2376533 2377792 . + 0 ID=cds-WJG95310.1;Parent=gene-PUW34_11760;Dbxref=NCBI_GP:WJG95310.1;Name=WJG95310.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=PUW34_11760;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WJG95310.1;transl_table=11 CP118122.1 Genbank gene 2377789 2378979 . + . ID=gene-PUW34_11765;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=PUW34_11765 CP118122.1 Protein Homology CDS 2377789 2378979 . + 0 ID=cds-WJG95311.1;Parent=gene-PUW34_11765;Dbxref=NCBI_GP:WJG95311.1;Name=WJG95311.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=PUW34_11765;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WJG95311.1;transl_table=11 CP118122.1 Genbank gene 2379405 2380427 . + . ID=gene-PUW34_11770;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=PUW34_11770 CP118122.1 Protein Homology CDS 2379405 2380427 . + 0 ID=cds-WJG95312.1;Parent=gene-PUW34_11770;Dbxref=NCBI_GP:WJG95312.1;Name=WJG95312.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=PUW34_11770;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WJG95312.1;transl_table=11 CP118122.1 Genbank gene 2380514 2380690 . - . ID=gene-PUW34_11775;Name=PUW34_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11775 CP118122.1 Protein Homology CDS 2380514 2380690 . - 0 ID=cds-WJG95313.1;Parent=gene-PUW34_11775;Dbxref=NCBI_GP:WJG95313.1;Name=WJG95313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=PUW34_11775;product=molybdopterin-binding protein;protein_id=WJG95313.1;transl_table=11 CP118122.1 Genbank gene 2380696 2381499 . - . ID=gene-PUW34_11780;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=PUW34_11780 CP118122.1 Protein Homology CDS 2380696 2381499 . - 0 ID=cds-WJG95314.1;Parent=gene-PUW34_11780;Dbxref=NCBI_GP:WJG95314.1;Name=WJG95314.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=PUW34_11780;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WJG95314.1;transl_table=11 CP118122.1 Genbank gene 2381525 2382814 . - . ID=gene-PUW34_11785;Name=PUW34_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11785 CP118122.1 Protein Homology CDS 2381525 2382814 . - 0 ID=cds-WJG95315.1;Parent=gene-PUW34_11785;Dbxref=NCBI_GP:WJG95315.1;Name=WJG95315.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=PUW34_11785;product=MFS transporter;protein_id=WJG95315.1;transl_table=11 CP118122.1 Genbank gene 2382870 2384075 . - . ID=gene-PUW34_11790;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=PUW34_11790 CP118122.1 Protein Homology CDS 2382870 2384075 . - 0 ID=cds-WJG95316.1;Parent=gene-PUW34_11790;Dbxref=NCBI_GP:WJG95316.1;Name=WJG95316.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=PUW34_11790;product=L-rhamnonate dehydratase;protein_id=WJG95316.1;transl_table=11 CP118122.1 Genbank gene 2384089 2384871 . - . ID=gene-PUW34_11795;Name=PUW34_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11795 CP118122.1 Protein Homology CDS 2384089 2384871 . - 0 ID=cds-WJG95317.1;Parent=gene-PUW34_11795;Dbxref=NCBI_GP:WJG95317.1;Name=WJG95317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=PUW34_11795;product=IclR family transcriptional regulator;protein_id=WJG95317.1;transl_table=11 CP118122.1 Genbank gene 2385121 2386317 . - . ID=gene-PUW34_11800;Name=PUW34_11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11800 CP118122.1 Protein Homology CDS 2385121 2386317 . - 0 ID=cds-WJG95318.1;Parent=gene-PUW34_11800;Dbxref=NCBI_GP:WJG95318.1;Name=WJG95318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=PUW34_11800;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WJG95318.1;transl_table=11 CP118122.1 Genbank gene 2386432 2386941 . - . ID=gene-PUW34_11805;Name=PUW34_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11805 CP118122.1 Protein Homology CDS 2386432 2386941 . - 0 ID=cds-WJG95319.1;Parent=gene-PUW34_11805;Dbxref=NCBI_GP:WJG95319.1;Name=WJG95319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739003.1;locus_tag=PUW34_11805;product=YfaZ family outer membrane protein;protein_id=WJG95319.1;transl_table=11 CP118122.1 Genbank gene 2387254 2387679 . + . ID=gene-PUW34_11810;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=PUW34_11810 CP118122.1 Protein Homology CDS 2387254 2387679 . + 0 ID=cds-WJG95320.1;Parent=gene-PUW34_11810;Dbxref=NCBI_GP:WJG95320.1;Name=WJG95320.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=PUW34_11810;product=nucleoside triphosphatase NudI;protein_id=WJG95320.1;transl_table=11 CP118122.1 Genbank gene 2387724 2388329 . - . ID=gene-PUW34_11815;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=PUW34_11815 CP118122.1 Protein Homology CDS 2387724 2388329 . - 0 ID=cds-WJG95321.1;Parent=gene-PUW34_11815;Dbxref=NCBI_GP:WJG95321.1;Name=WJG95321.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=PUW34_11815;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WJG95321.1;transl_table=11 CP118122.1 Genbank gene 2388628 2389767 . + . ID=gene-PUW34_11820;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=PUW34_11820 CP118122.1 Protein Homology CDS 2388628 2389767 . + 0 ID=cds-WJG98985.1;Parent=gene-PUW34_11820;Dbxref=NCBI_GP:WJG98985.1;Name=WJG98985.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=PUW34_11820;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WJG98985.1;transl_table=11 CP118122.1 Genbank gene 2389770 2390753 . + . ID=gene-PUW34_11825;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=PUW34_11825 CP118122.1 Protein Homology CDS 2389770 2390753 . + 0 ID=cds-WJG95322.1;Parent=gene-PUW34_11825;Dbxref=NCBI_GP:WJG95322.1;Name=WJG95322.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=PUW34_11825;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WJG95322.1;transl_table=11 CP118122.1 Genbank gene 2390750 2392732 . + . ID=gene-PUW34_11830;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=PUW34_11830 CP118122.1 Protein Homology CDS 2390750 2392732 . + 0 ID=cds-WJG95323.1;Parent=gene-PUW34_11830;Dbxref=NCBI_GP:WJG95323.1;Name=WJG95323.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=PUW34_11830;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WJG95323.1;transl_table=11 CP118122.1 Genbank gene 2392729 2393628 . + . ID=gene-PUW34_11835;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=PUW34_11835 CP118122.1 Protein Homology CDS 2392729 2393628 . + 0 ID=cds-WJG95324.1;Parent=gene-PUW34_11835;Dbxref=NCBI_GP:WJG95324.1;Name=WJG95324.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=PUW34_11835;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WJG95324.1;transl_table=11 CP118122.1 Genbank gene 2393625 2395271 . + . ID=gene-PUW34_11840;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=PUW34_11840 CP118122.1 Protein Homology CDS 2393625 2395271 . + 0 ID=cds-WJG95325.1;Parent=gene-PUW34_11840;Dbxref=NCBI_GP:WJG95325.1;Name=WJG95325.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=PUW34_11840;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WJG95325.1;transl_table=11 CP118122.1 Genbank gene 2395268 2395603 . + . ID=gene-PUW34_11845;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=PUW34_11845 CP118122.1 Protein Homology CDS 2395268 2395603 . + 0 ID=cds-WJG95326.1;Parent=gene-PUW34_11845;Dbxref=NCBI_GP:WJG95326.1;Name=WJG95326.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=PUW34_11845;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WJG95326.1;transl_table=11 CP118122.1 Genbank gene 2395603 2395980 . + . ID=gene-PUW34_11850;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=PUW34_11850 CP118122.1 Protein Homology CDS 2395603 2395980 . + 0 ID=cds-WJG95327.1;Parent=gene-PUW34_11850;Dbxref=NCBI_GP:WJG95327.1;Name=WJG95327.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=PUW34_11850;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WJG95327.1;transl_table=11 CP118122.1 Genbank gene 2395975 2396232 . - . ID=gene-PUW34_11855;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=PUW34_11855 CP118122.1 Protein Homology CDS 2395975 2396232 . - 0 ID=cds-WJG95328.1;Parent=gene-PUW34_11855;Dbxref=NCBI_GP:WJG95328.1;Name=WJG95328.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=PUW34_11855;product=signal transduction protein PmrD;protein_id=WJG95328.1;transl_table=11 CP118122.1 Genbank gene 2396330 2397697 . - . ID=gene-PUW34_11860;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=PUW34_11860 CP118122.1 Protein Homology CDS 2396330 2397697 . - 0 ID=cds-WJG95329.1;Parent=gene-PUW34_11860;Dbxref=NCBI_GP:WJG95329.1;Name=WJG95329.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=PUW34_11860;product=o-succinylbenzoate--CoA ligase;protein_id=WJG95329.1;transl_table=11 CP118122.1 Genbank gene 2397694 2398656 . - . ID=gene-PUW34_11865;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=PUW34_11865 CP118122.1 Protein Homology CDS 2397694 2398656 . - 0 ID=cds-WJG95330.1;Parent=gene-PUW34_11865;Dbxref=NCBI_GP:WJG95330.1;Name=WJG95330.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=PUW34_11865;product=o-succinylbenzoate synthase;protein_id=WJG95330.1;transl_table=11 CP118122.1 Genbank gene 2398656 2399513 . - . ID=gene-PUW34_11870;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=PUW34_11870 CP118122.1 Protein Homology CDS 2398656 2399513 . - 0 ID=cds-WJG95331.1;Parent=gene-PUW34_11870;Dbxref=NCBI_GP:WJG95331.1;Name=WJG95331.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=PUW34_11870;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WJG95331.1;transl_table=11 CP118122.1 Genbank gene 2399528 2400286 . - . ID=gene-PUW34_11875;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=PUW34_11875 CP118122.1 Protein Homology CDS 2399528 2400286 . - 0 ID=cds-WJG95332.1;Parent=gene-PUW34_11875;Dbxref=NCBI_GP:WJG95332.1;Name=WJG95332.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=PUW34_11875;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WJG95332.1;transl_table=11 CP118122.1 Genbank pseudogene 2400283 2401952 . - . ID=gene-PUW34_11880;Name=menD;gbkey=Gene;gene=menD;gene_biotype=pseudogene;locus_tag=PUW34_11880;pseudo=true CP118122.1 Protein Homology CDS 2400283 2401952 . - 0 ID=cds-PUW34_11880;Parent=gene-PUW34_11880;Note=frameshifted;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=PUW34_11880;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2402038 2403333 . - . ID=gene-PUW34_11885;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=PUW34_11885 CP118122.1 Protein Homology CDS 2402038 2403333 . - 0 ID=cds-WJG95333.1;Parent=gene-PUW34_11885;Dbxref=NCBI_GP:WJG95333.1;Name=WJG95333.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=PUW34_11885;product=isochorismate synthase MenF;protein_id=WJG95333.1;transl_table=11 CP118122.1 Genbank gene 2403434 2403739 . - . ID=gene-PUW34_11890;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=PUW34_11890 CP118122.1 Protein Homology CDS 2403434 2403739 . - 0 ID=cds-WJG95334.1;Parent=gene-PUW34_11890;Dbxref=NCBI_GP:WJG95334.1;Name=WJG95334.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=PUW34_11890;product=stress response protein ElaB;protein_id=WJG95334.1;transl_table=11 CP118122.1 Genbank gene 2403794 2404255 . - . ID=gene-PUW34_11895;Name=PUW34_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11895 CP118122.1 Protein Homology CDS 2403794 2404255 . - 0 ID=cds-WJG95335.1;Parent=gene-PUW34_11895;Dbxref=NCBI_GP:WJG95335.1;Name=WJG95335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=PUW34_11895;product=GNAT family N-acetyltransferase;protein_id=WJG95335.1;transl_table=11 CP118122.1 Genbank gene 2404316 2405233 . + . ID=gene-PUW34_11900;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=PUW34_11900 CP118122.1 Protein Homology CDS 2404316 2405233 . + 0 ID=cds-WJG95336.1;Parent=gene-PUW34_11900;Dbxref=NCBI_GP:WJG95336.1;Name=WJG95336.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rbn;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=PUW34_11900;product=ribonuclease BN;protein_id=WJG95336.1;transl_table=11 CP118122.1 Genbank gene 2405299 2406300 . + . ID=gene-PUW34_11905;Name=PUW34_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11905 CP118122.1 Protein Homology CDS 2405299 2406300 . + 0 ID=cds-WJG95337.1;Parent=gene-PUW34_11905;Dbxref=NCBI_GP:WJG95337.1;Name=WJG95337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=PUW34_11905;product=chemotaxis protein;protein_id=WJG95337.1;transl_table=11 CP118122.1 Genbank gene 2406341 2408131 . - . ID=gene-PUW34_11910;Name=PUW34_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11910 CP118122.1 Protein Homology CDS 2406341 2408131 . - 0 ID=cds-WJG95338.1;Parent=gene-PUW34_11910;Dbxref=NCBI_GP:WJG95338.1;Name=WJG95338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=PUW34_11910;product=VWA domain-containing protein;protein_id=WJG95338.1;transl_table=11 CP118122.1 Genbank gene 2408600 2408758 . + . ID=gene-PUW34_11915;Name=PUW34_11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11915 CP118122.1 Protein Homology CDS 2408600 2408758 . + 0 ID=cds-WJG98986.1;Parent=gene-PUW34_11915;Dbxref=NCBI_GP:WJG98986.1;Name=WJG98986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020544.2;locus_tag=PUW34_11915;product=DUF1877 family protein;protein_id=WJG98986.1;transl_table=11 CP118122.1 Genbank gene 2409020 2410477 . - . ID=gene-PUW34_11920;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=PUW34_11920 CP118122.1 Protein Homology CDS 2409020 2410477 . - 0 ID=cds-WJG95339.1;Parent=gene-PUW34_11920;Dbxref=NCBI_GP:WJG95339.1;Name=WJG95339.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=PUW34_11920;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WJG95339.1;transl_table=11 CP118122.1 Genbank gene 2410484 2412013 . - . ID=gene-PUW34_11925;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=PUW34_11925 CP118122.1 Protein Homology CDS 2410484 2412013 . - 0 ID=cds-WJG95340.1;Parent=gene-PUW34_11925;Dbxref=NCBI_GP:WJG95340.1;Name=WJG95340.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=PUW34_11925;product=NADH-quinone oxidoreductase subunit M;protein_id=WJG95340.1;transl_table=11 CP118122.1 Genbank pseudogene 2412327 2414167 . - . ID=gene-PUW34_11930;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=pseudogene;locus_tag=PUW34_11930;pseudo=true CP118122.1 Protein Homology CDS 2412327 2414167 . - 0 ID=cds-PUW34_11930;Parent=gene-PUW34_11930;Note=frameshifted;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=PUW34_11930;product=NADH-quinone oxidoreductase subunit L;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2414164 2414466 . - . ID=gene-PUW34_11935;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=PUW34_11935 CP118122.1 Protein Homology CDS 2414164 2414466 . - 0 ID=cds-WJG95341.1;Parent=gene-PUW34_11935;Dbxref=NCBI_GP:WJG95341.1;Name=WJG95341.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=PUW34_11935;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WJG95341.1;transl_table=11 CP118122.1 Genbank gene 2414463 2415017 . - . ID=gene-PUW34_11940;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=PUW34_11940 CP118122.1 Protein Homology CDS 2414463 2415017 . - 0 ID=cds-WJG95342.1;Parent=gene-PUW34_11940;Dbxref=NCBI_GP:WJG95342.1;Name=WJG95342.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=PUW34_11940;product=NADH-quinone oxidoreductase subunit J;protein_id=WJG95342.1;transl_table=11 CP118122.1 Genbank gene 2415028 2415570 . - . ID=gene-PUW34_11945;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=PUW34_11945 CP118122.1 Protein Homology CDS 2415028 2415570 . - 0 ID=cds-WJG95343.1;Parent=gene-PUW34_11945;Dbxref=NCBI_GP:WJG95343.1;Name=WJG95343.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=PUW34_11945;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WJG95343.1;transl_table=11 CP118122.1 Genbank gene 2415585 2416562 . - . ID=gene-PUW34_11950;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=PUW34_11950 CP118122.1 Protein Homology CDS 2415585 2416562 . - 0 ID=cds-WJG95344.1;Parent=gene-PUW34_11950;Dbxref=NCBI_GP:WJG95344.1;Name=WJG95344.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=PUW34_11950;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WJG95344.1;transl_table=11 CP118122.1 Genbank gene 2416559 2419285 . - . ID=gene-PUW34_11955;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=PUW34_11955 CP118122.1 Protein Homology CDS 2416559 2419285 . - 0 ID=cds-WJG95345.1;Parent=gene-PUW34_11955;Dbxref=NCBI_GP:WJG95345.1;Name=WJG95345.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=PUW34_11955;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WJG95345.1;transl_table=11 CP118122.1 Genbank gene 2419316 2420653 . - . ID=gene-PUW34_11960;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=PUW34_11960 CP118122.1 Protein Homology CDS 2419316 2420653 . - 0 ID=cds-WJG95346.1;Parent=gene-PUW34_11960;Dbxref=NCBI_GP:WJG95346.1;Name=WJG95346.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=PUW34_11960;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WJG95346.1;transl_table=11 CP118122.1 Genbank gene 2420650 2421150 . - . ID=gene-PUW34_11965;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=PUW34_11965 CP118122.1 Protein Homology CDS 2420650 2421150 . - 0 ID=cds-WJG95347.1;Parent=gene-PUW34_11965;Dbxref=NCBI_GP:WJG95347.1;Name=WJG95347.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=PUW34_11965;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WJG95347.1;transl_table=11 CP118122.1 Genbank gene 2421153 2422955 . - . ID=gene-PUW34_11970;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=PUW34_11970 CP118122.1 Protein Homology CDS 2421153 2422955 . - 0 ID=cds-WJG95348.1;Parent=gene-PUW34_11970;Dbxref=NCBI_GP:WJG95348.1;Name=WJG95348.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=PUW34_11970;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WJG95348.1;transl_table=11 CP118122.1 Genbank gene 2423042 2423704 . - . ID=gene-PUW34_11975;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=PUW34_11975 CP118122.1 Protein Homology CDS 2423042 2423704 . - 0 ID=cds-WJG95349.1;Parent=gene-PUW34_11975;Dbxref=NCBI_GP:WJG95349.1;Name=WJG95349.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=PUW34_11975;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WJG95349.1;transl_table=11 CP118122.1 Genbank gene 2423720 2424163 . - . ID=gene-PUW34_11980;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=PUW34_11980 CP118122.1 Protein Homology CDS 2423720 2424163 . - 0 ID=cds-WJG95350.1;Parent=gene-PUW34_11980;Dbxref=NCBI_GP:WJG95350.1;Name=WJG95350.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=PUW34_11980;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WJG95350.1;transl_table=11 CP118122.1 Genbank gene 2424557 2424709 . - . ID=gene-PUW34_11985;Name=PUW34_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_11985 CP118122.1 Protein Homology CDS 2424557 2424709 . - 0 ID=cds-WJG95351.1;Parent=gene-PUW34_11985;Dbxref=NCBI_GP:WJG95351.1;Name=WJG95351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=PUW34_11985;product=hypothetical protein;protein_id=WJG95351.1;transl_table=11 CP118122.1 Genbank gene 2424789 2425727 . - . ID=gene-PUW34_11990;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=PUW34_11990 CP118122.1 Protein Homology CDS 2424789 2425727 . - 0 ID=cds-WJG95352.1;Parent=gene-PUW34_11990;Dbxref=NCBI_GP:WJG95352.1;Name=WJG95352.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=PUW34_11990;product=transcriptional regulator LrhA;protein_id=WJG95352.1;transl_table=11 CP118122.1 Genbank gene 2426659 2427873 . + . ID=gene-PUW34_11995;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=PUW34_11995 CP118122.1 Protein Homology CDS 2426659 2427873 . + 0 ID=cds-WJG95353.1;Parent=gene-PUW34_11995;Dbxref=NCBI_GP:WJG95353.1;Name=WJG95353.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=PUW34_11995;product=alanine transaminase AlaA;protein_id=WJG95353.1;transl_table=11 CP118122.1 Genbank gene 2427967 2428566 . + . ID=gene-PUW34_12000;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=PUW34_12000 CP118122.1 Protein Homology CDS 2427967 2428566 . + 0 ID=cds-WJG95354.1;Parent=gene-PUW34_12000;Dbxref=NCBI_GP:WJG95354.1;Name=WJG95354.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=PUW34_12000;product=5'-deoxynucleotidase;protein_id=WJG95354.1;transl_table=11 CP118122.1 Genbank gene 2428672 2430498 . - . ID=gene-PUW34_12005;Name=PUW34_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12005 CP118122.1 Protein Homology CDS 2428672 2430498 . - 0 ID=cds-WJG95355.1;Parent=gene-PUW34_12005;Dbxref=NCBI_GP:WJG95355.1;Name=WJG95355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=PUW34_12005;product=SLC13 family permease;protein_id=WJG95355.1;transl_table=11 CP118122.1 Genbank gene 2430575 2431252 . - . ID=gene-PUW34_12010;Name=PUW34_12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12010 CP118122.1 Protein Homology CDS 2430575 2431252 . - 0 ID=cds-WJG98987.1;Parent=gene-PUW34_12010;Dbxref=NCBI_GP:WJG98987.1;Name=WJG98987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=PUW34_12010;product=sugar phosphatase;protein_id=WJG98987.1;transl_table=11 CP118122.1 Genbank gene 2431245 2431739 . - . ID=gene-PUW34_12015;Name=PUW34_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12015 CP118122.1 Protein Homology CDS 2431245 2431739 . - 0 ID=cds-WJG95356.1;Parent=gene-PUW34_12015;Dbxref=NCBI_GP:WJG95356.1;Name=WJG95356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=PUW34_12015;product=YfbU family protein;protein_id=WJG95356.1;transl_table=11 CP118122.1 Genbank pseudogene 2431822 2432276 . - . ID=gene-PUW34_12020;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=pseudogene;locus_tag=PUW34_12020;pseudo=true CP118122.1 Protein Homology CDS 2431822 2432276 . - 0 ID=cds-PUW34_12020;Parent=gene-PUW34_12020;Note=frameshifted;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=PUW34_12020;product=terminus macrodomain insulation protein YfbV;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2432615 2433817 . + . ID=gene-PUW34_12025;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=PUW34_12025 CP118122.1 Protein Homology CDS 2432615 2433817 . + 0 ID=cds-WJG95357.1;Parent=gene-PUW34_12025;Dbxref=NCBI_GP:WJG95357.1;Name=WJG95357.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=PUW34_12025;product=acetate kinase;protein_id=WJG95357.1;transl_table=11 CP118122.1 Genbank gene 2433894 2436038 . + . ID=gene-PUW34_12030;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PUW34_12030 CP118122.1 Protein Homology CDS 2433894 2436038 . + 0 ID=cds-WJG95358.1;Parent=gene-PUW34_12030;Dbxref=NCBI_GP:WJG95358.1;Name=WJG95358.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=PUW34_12030;product=phosphate acetyltransferase;protein_id=WJG95358.1;transl_table=11 CP118122.1 Genbank gene 2436256 2437776 . + . ID=gene-PUW34_12035;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=PUW34_12035 CP118122.1 Protein Homology CDS 2436256 2437776 . + 0 ID=cds-WJG95359.1;Parent=gene-PUW34_12035;Dbxref=NCBI_GP:WJG95359.1;Name=WJG95359.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=PUW34_12035;product=putative basic amino acid antiporter YfcC;protein_id=WJG95359.1;transl_table=11 CP118122.1 Genbank gene 2437825 2438778 . - . ID=gene-PUW34_12040;Name=PUW34_12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12040 CP118122.1 Protein Homology CDS 2437825 2438778 . - 0 ID=cds-WJG95360.1;Parent=gene-PUW34_12040;Dbxref=NCBI_GP:WJG95360.1;Name=WJG95360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=PUW34_12040;product=transketolase family protein;protein_id=WJG95360.1;transl_table=11 CP118122.1 Genbank gene 2438771 2439601 . - . ID=gene-PUW34_12045;Name=PUW34_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12045 CP118122.1 Protein Homology CDS 2438771 2439601 . - 0 ID=cds-WJG95361.1;Parent=gene-PUW34_12045;Dbxref=NCBI_GP:WJG95361.1;Name=WJG95361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=PUW34_12045;product=transketolase;protein_id=WJG95361.1;transl_table=11 CP118122.1 Genbank gene 2439598 2440989 . - . ID=gene-PUW34_12050;Name=PUW34_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12050 CP118122.1 Protein Homology CDS 2439598 2440989 . - 0 ID=cds-WJG95362.1;Parent=gene-PUW34_12050;Dbxref=NCBI_GP:WJG95362.1;Name=WJG95362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=PUW34_12050;product=PTS ascorbate transporter subunit IIC;protein_id=WJG95362.1;transl_table=11 CP118122.1 Genbank gene 2441010 2441282 . - . ID=gene-PUW34_12055;Name=PUW34_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12055 CP118122.1 Protein Homology CDS 2441010 2441282 . - 0 ID=cds-WJG95363.1;Parent=gene-PUW34_12055;Dbxref=NCBI_GP:WJG95363.1;Name=WJG95363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=PUW34_12055;product=PTS sugar transporter subunit IIB;protein_id=WJG95363.1;transl_table=11 CP118122.1 Genbank gene 2441363 2441806 . - . ID=gene-PUW34_12060;Name=PUW34_12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12060 CP118122.1 Protein Homology CDS 2441363 2441806 . - 0 ID=cds-WJG95364.1;Parent=gene-PUW34_12060;Dbxref=NCBI_GP:WJG95364.1;Name=WJG95364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=PUW34_12060;product=PTS sugar transporter subunit IIA;protein_id=WJG95364.1;transl_table=11 CP118122.1 Genbank gene 2442059 2443078 . + . ID=gene-PUW34_12065;Name=PUW34_12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12065 CP118122.1 Protein Homology CDS 2442059 2443078 . + 0 ID=cds-WJG95365.1;Parent=gene-PUW34_12065;Dbxref=NCBI_GP:WJG95365.1;Name=WJG95365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=PUW34_12065;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG95365.1;transl_table=11 CP118122.1 Genbank gene 2443084 2443638 . - . ID=gene-PUW34_12070;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=PUW34_12070 CP118122.1 Protein Homology CDS 2443084 2443638 . - 0 ID=cds-WJG95366.1;Parent=gene-PUW34_12070;Dbxref=NCBI_GP:WJG95366.1;Name=WJG95366.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=PUW34_12070;product=NUDIX hydrolase YfcD;protein_id=WJG95366.1;transl_table=11 CP118122.1 Genbank gene 2443695 2444246 . - . ID=gene-PUW34_12075;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=PUW34_12075 CP118122.1 Protein Homology CDS 2443695 2444246 . - 0 ID=cds-WJG95367.1;Parent=gene-PUW34_12075;Dbxref=NCBI_GP:WJG95367.1;Name=WJG95367.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=PUW34_12075;product=phosphodiesterase;protein_id=WJG95367.1;transl_table=11 CP118122.1 Genbank gene 2444302 2444946 . - . ID=gene-PUW34_12080;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=PUW34_12080 CP118122.1 Protein Homology CDS 2444302 2444946 . - 0 ID=cds-WJG95368.1;Parent=gene-PUW34_12080;Dbxref=NCBI_GP:WJG95368.1;Name=WJG95368.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=PUW34_12080;product=glutathione transferase;protein_id=WJG95368.1;transl_table=11 CP118122.1 Genbank gene 2445089 2445736 . + . ID=gene-PUW34_12085;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=PUW34_12085 CP118122.1 Protein Homology CDS 2445089 2445736 . + 0 ID=cds-WJG95369.1;Parent=gene-PUW34_12085;Dbxref=NCBI_GP:WJG95369.1;Name=WJG95369.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=PUW34_12085;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WJG95369.1;transl_table=11 CP118122.1 Genbank gene 2445862 2446755 . + . ID=gene-PUW34_12090;Name=PUW34_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12090 CP118122.1 Protein Homology CDS 2445862 2446755 . + 0 ID=cds-WJG95370.1;Parent=gene-PUW34_12090;Dbxref=NCBI_GP:WJG95370.1;Name=WJG95370.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=PUW34_12090;product=TIGR01777 family oxidoreductase;protein_id=WJG95370.1;transl_table=11 CP118122.1 Genbank gene 2446807 2447580 . - . ID=gene-PUW34_12095;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=PUW34_12095 CP118122.1 Protein Homology CDS 2446807 2447580 . - 0 ID=cds-WJG98988.1;Parent=gene-PUW34_12095;Dbxref=NCBI_GP:WJG98988.1;Name=WJG98988.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=PUW34_12095;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WJG98988.1;transl_table=11 CP118122.1 Genbank pseudogene 2447594 2448300 . - . ID=gene-PUW34_12100;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=pseudogene;locus_tag=PUW34_12100;pseudo=true CP118122.1 Protein Homology CDS 2447594 2448300 . - 0 ID=cds-PUW34_12100;Parent=gene-PUW34_12100;Note=frameshifted;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=PUW34_12100;product=histidine ABC transporter permease HisM;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2448297 2448983 . - . ID=gene-PUW34_12105;Name=PUW34_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12105 CP118122.1 Protein Homology CDS 2448297 2448983 . - 0 ID=cds-WJG95371.1;Parent=gene-PUW34_12105;Dbxref=NCBI_GP:WJG95371.1;Name=WJG95371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=PUW34_12105;product=histidine ABC transporter permease HisQ;protein_id=WJG95371.1;transl_table=11 CP118122.1 Genbank gene 2449166 2449948 . - . ID=gene-PUW34_12110;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=PUW34_12110 CP118122.1 Protein Homology CDS 2449166 2449948 . - 0 ID=cds-WJG95372.1;Parent=gene-PUW34_12110;Dbxref=NCBI_GP:WJG95372.1;Name=WJG95372.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=PUW34_12110;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WJG95372.1;transl_table=11 CP118122.1 Genbank gene 2450186 2450968 . - . ID=gene-PUW34_12115;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=PUW34_12115 CP118122.1 Protein Homology CDS 2450186 2450968 . - 0 ID=cds-WJG95373.1;Parent=gene-PUW34_12115;Dbxref=NCBI_GP:WJG95373.1;Name=WJG95373.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=PUW34_12115;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WJG95373.1;transl_table=11 CP118122.1 Genbank gene 2451257 2451826 . - . ID=gene-PUW34_12120;Name=PUW34_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12120 CP118122.1 Protein Homology CDS 2451257 2451826 . - 0 ID=cds-WJG95374.1;Parent=gene-PUW34_12120;Dbxref=NCBI_GP:WJG95374.1;Name=WJG95374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=PUW34_12120;product=UbiX family flavin prenyltransferase;protein_id=WJG95374.1;transl_table=11 CP118122.1 Genbank gene 2451853 2453259 . - . ID=gene-PUW34_12125;Name=PUW34_12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12125 CP118122.1 Protein Homology CDS 2451853 2453259 . - 0 ID=cds-WJG95375.1;Parent=gene-PUW34_12125;Dbxref=NCBI_GP:WJG95375.1;Name=WJG95375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=PUW34_12125;product=amino acid permease;protein_id=WJG95375.1;transl_table=11 CP118122.1 Genbank gene 2453323 2454426 . - . ID=gene-PUW34_12130;Name=PUW34_12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12130 CP118122.1 Protein Homology CDS 2453323 2454426 . - 0 ID=cds-WJG95376.1;Parent=gene-PUW34_12130;Dbxref=NCBI_GP:WJG95376.1;Name=WJG95376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=PUW34_12130;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WJG95376.1;transl_table=11 CP118122.1 Genbank pseudogene 2454428 2455849 . - . ID=gene-PUW34_12135;Name=PUW34_12135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12135;pseudo=true CP118122.1 Protein Homology CDS 2454428 2455849 . - 0 ID=cds-PUW34_12135;Parent=gene-PUW34_12135;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=PUW34_12135;product=APC family permease;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2455940 2457337 . - . ID=gene-PUW34_12140;Name=PUW34_12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12140 CP118122.1 Protein Homology CDS 2455940 2457337 . - 0 ID=cds-WJG95377.1;Parent=gene-PUW34_12140;Dbxref=NCBI_GP:WJG95377.1;Name=WJG95377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=PUW34_12140;product=alanine racemase;protein_id=WJG95377.1;transl_table=11 CP118122.1 Genbank pseudogene 2457548 2458974 . + . ID=gene-PUW34_12145;Name=PUW34_12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12145;pseudo=true CP118122.1 Protein Homology CDS 2457548 2458974 . + 0 ID=cds-PUW34_12145;Parent=gene-PUW34_12145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=PUW34_12145;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2459010 2460527 . - . ID=gene-PUW34_12150;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=PUW34_12150 CP118122.1 Protein Homology CDS 2459010 2460527 . - 0 ID=cds-WJG95378.1;Parent=gene-PUW34_12150;Dbxref=NCBI_GP:WJG95378.1;Name=WJG95378.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=PUW34_12150;product=amidophosphoribosyltransferase;protein_id=WJG95378.1;transl_table=11 CP118122.1 Genbank gene 2460565 2461053 . - . ID=gene-PUW34_12155;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=PUW34_12155 CP118122.1 Protein Homology CDS 2460565 2461053 . - 0 ID=cds-WJG95379.1;Parent=gene-PUW34_12155;Dbxref=NCBI_GP:WJG95379.1;Name=WJG95379.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=PUW34_12155;product=colicin V production protein;protein_id=WJG95379.1;transl_table=11 CP118122.1 Genbank gene 2461364 2462038 . - . ID=gene-PUW34_12160;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=PUW34_12160 CP118122.1 Protein Homology CDS 2461364 2462038 . - 0 ID=cds-WJG95380.1;Parent=gene-PUW34_12160;Dbxref=NCBI_GP:WJG95380.1;Name=WJG95380.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=PUW34_12160;product=cell division protein DedD;protein_id=WJG95380.1;transl_table=11 CP118122.1 Genbank pseudogene 2462028 2463294 . - . ID=gene-PUW34_12165;Name=folC;gbkey=Gene;gene=folC;gene_biotype=pseudogene;locus_tag=PUW34_12165;pseudo=true CP118122.1 Protein Homology CDS 2462028 2463294 . - 0 ID=cds-PUW34_12165;Parent=gene-PUW34_12165;Note=frameshifted;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=PUW34_12165;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2463362 2464276 . - . ID=gene-PUW34_12170;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=PUW34_12170 CP118122.1 Protein Homology CDS 2463362 2464276 . - 0 ID=cds-WJG95381.1;Parent=gene-PUW34_12170;Dbxref=NCBI_GP:WJG95381.1;Name=WJG95381.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=PUW34_12170;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WJG95381.1;transl_table=11 CP118122.1 Genbank gene 2464426 2465085 . - . ID=gene-PUW34_12175;Name=PUW34_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12175 CP118122.1 Protein Homology CDS 2464426 2465085 . - 0 ID=cds-WJG95382.1;Parent=gene-PUW34_12175;Dbxref=NCBI_GP:WJG95382.1;Name=WJG95382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=PUW34_12175;product=DedA family protein;protein_id=WJG95382.1;transl_table=11 CP118122.1 Genbank gene 2465134 2465946 . - . ID=gene-PUW34_12180;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=PUW34_12180 CP118122.1 Protein Homology CDS 2465134 2465946 . - 0 ID=cds-WJG95383.1;Parent=gene-PUW34_12180;Dbxref=NCBI_GP:WJG95383.1;Name=WJG95383.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=PUW34_12180;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WJG95383.1;transl_table=11 CP118122.1 Genbank gene 2465946 2466959 . - . ID=gene-PUW34_12185;Name=PUW34_12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12185 CP118122.1 Protein Homology CDS 2465946 2466959 . - 0 ID=cds-WJG95384.1;Parent=gene-PUW34_12185;Dbxref=NCBI_GP:WJG95384.1;Name=WJG95384.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=PUW34_12185;product=aspartate-semialdehyde dehydrogenase;protein_id=WJG95384.1;transl_table=11 CP118122.1 Genbank gene 2467027 2468163 . - . ID=gene-PUW34_12190;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=PUW34_12190 CP118122.1 Protein Homology CDS 2467027 2468163 . - 0 ID=cds-WJG95385.1;Parent=gene-PUW34_12190;Dbxref=NCBI_GP:WJG95385.1;Name=WJG95385.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=PUW34_12190;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WJG95385.1;transl_table=11 CP118122.1 Genbank pseudogene 2468267 2469267 . + . ID=gene-PUW34_12195;Name=flk;gbkey=Gene;gene=flk;gene_biotype=pseudogene;locus_tag=PUW34_12195;pseudo=true CP118122.1 Protein Homology CDS 2468267 2469267 . + 0 ID=cds-PUW34_12195;Parent=gene-PUW34_12195;Note=frameshifted;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=PUW34_12195;product=flagella biosynthesis regulator Flk;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2469264 2470442 . - . ID=gene-PUW34_12200;Name=PUW34_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12200 CP118122.1 Protein Homology CDS 2469264 2470442 . - 0 ID=cds-WJG95386.1;Parent=gene-PUW34_12200;Dbxref=NCBI_GP:WJG95386.1;Name=WJG95386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=PUW34_12200;product=MFS transporter;protein_id=WJG95386.1;transl_table=11 CP118122.1 Genbank gene 2470622 2470996 . - . ID=gene-PUW34_12205;Name=PUW34_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12205 CP118122.1 Protein Homology CDS 2470622 2470996 . - 0 ID=cds-WJG95387.1;Parent=gene-PUW34_12205;Dbxref=NCBI_GP:WJG95387.1;Name=WJG95387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=PUW34_12205;product=hypothetical protein;protein_id=WJG95387.1;transl_table=11 CP118122.1 Genbank gene 2471169 2471417 . + . ID=gene-PUW34_12210;Name=PUW34_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12210 CP118122.1 Protein Homology CDS 2471169 2471417 . + 0 ID=cds-WJG95388.1;Parent=gene-PUW34_12210;Dbxref=NCBI_GP:WJG95388.1;Name=WJG95388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=PUW34_12210;product=transcriptional regulator;protein_id=WJG95388.1;transl_table=11 CP118122.1 Genbank gene 2471586 2471954 . + . ID=gene-PUW34_12215;Name=PUW34_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12215 CP118122.1 Protein Homology CDS 2471586 2471954 . + 0 ID=cds-WJG95389.1;Parent=gene-PUW34_12215;Dbxref=NCBI_GP:WJG95389.1;Name=WJG95389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=PUW34_12215;product=NlpC/P60 family protein;protein_id=WJG95389.1;transl_table=11 CP118122.1 Genbank gene 2471954 2472472 . + . ID=gene-PUW34_12220;Name=PUW34_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12220 CP118122.1 Protein Homology CDS 2471954 2472472 . + 0 ID=cds-WJG95390.1;Parent=gene-PUW34_12220;Dbxref=NCBI_GP:WJG95390.1;Name=WJG95390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=PUW34_12220;product=YbjP/YqhG family protein;protein_id=WJG95390.1;transl_table=11 CP118122.1 Genbank gene 2472539 2473195 . - . ID=gene-PUW34_12225;Name=PUW34_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12225 CP118122.1 Protein Homology CDS 2472539 2473195 . - 0 ID=cds-WJG95391.1;Parent=gene-PUW34_12225;Dbxref=NCBI_GP:WJG95391.1;Name=WJG95391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=PUW34_12225;product=type II CAAX endopeptidase family protein;protein_id=WJG95391.1;transl_table=11 CP118122.1 Genbank gene 2473293 2474507 . - . ID=gene-PUW34_12230;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=PUW34_12230 CP118122.1 Protein Homology CDS 2473293 2474507 . - 0 ID=cds-WJG95392.1;Parent=gene-PUW34_12230;Dbxref=NCBI_GP:WJG95392.1;Name=WJG95392.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=PUW34_12230;product=beta-ketoacyl-ACP synthase I;protein_id=WJG95392.1;transl_table=11 CP118122.1 Genbank gene 2474667 2476667 . + . ID=gene-PUW34_12235;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=PUW34_12235 CP118122.1 Protein Homology CDS 2474667 2476667 . + 0 ID=cds-WJG95393.1;Parent=gene-PUW34_12235;Dbxref=NCBI_GP:WJG95393.1;Name=WJG95393.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=PUW34_12235;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WJG95393.1;transl_table=11 CP118122.1 Genbank gene 2476719 2476994 . - . ID=gene-PUW34_12240;Name=PUW34_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12240 CP118122.1 Protein Homology CDS 2476719 2476994 . - 0 ID=cds-WJG95394.1;Parent=gene-PUW34_12240;Dbxref=NCBI_GP:WJG95394.1;Name=WJG95394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=PUW34_12240;product=YfcL family protein;protein_id=WJG95394.1;transl_table=11 CP118122.1 Genbank gene 2477027 2477575 . - . ID=gene-PUW34_12245;Name=PUW34_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12245 CP118122.1 Protein Homology CDS 2477027 2477575 . - 0 ID=cds-WJG95395.1;Parent=gene-PUW34_12245;Dbxref=NCBI_GP:WJG95395.1;Name=WJG95395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=PUW34_12245;product=elongation factor P hydroxylase;protein_id=WJG95395.1;transl_table=11 CP118122.1 Genbank gene 2477575 2478384 . - . ID=gene-PUW34_12250;Name=PUW34_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12250 CP118122.1 Protein Homology CDS 2477575 2478384 . - 0 ID=cds-WJG95396.1;Parent=gene-PUW34_12250;Dbxref=NCBI_GP:WJG95396.1;Name=WJG95396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=PUW34_12250;product=sulfite exporter TauE/SafE family protein;protein_id=WJG95396.1;transl_table=11 CP118122.1 Genbank gene 2478384 2479208 . - . ID=gene-PUW34_12255;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=PUW34_12255 CP118122.1 Protein Homology CDS 2478384 2479208 . - 0 ID=cds-WJG95397.1;Parent=gene-PUW34_12255;Dbxref=NCBI_GP:WJG95397.1;Name=WJG95397.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=PUW34_12255;product=penicillin-insensitive murein endopeptidase;protein_id=WJG95397.1;transl_table=11 CP118122.1 Genbank gene 2479212 2480297 . - . ID=gene-PUW34_12260;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=PUW34_12260 CP118122.1 Protein Homology CDS 2479212 2480297 . - 0 ID=cds-WJG95398.1;Parent=gene-PUW34_12260;Dbxref=NCBI_GP:WJG95398.1;Name=WJG95398.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=PUW34_12260;product=chorismate synthase;protein_id=WJG95398.1;transl_table=11 CP118122.1 Genbank gene 2480333 2481265 . - . ID=gene-PUW34_12265;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=PUW34_12265 CP118122.1 Protein Homology CDS 2480333 2481265 . - 0 ID=cds-WJG95399.1;Parent=gene-PUW34_12265;Dbxref=NCBI_GP:WJG95399.1;Name=WJG95399.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=PUW34_12265;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WJG95399.1;transl_table=11 CP118122.1 Genbank gene 2481431 2481982 . + . ID=gene-PUW34_12270;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=PUW34_12270 CP118122.1 Protein Homology CDS 2481431 2481982 . + 0 ID=cds-WJG95400.1;Parent=gene-PUW34_12270;Dbxref=NCBI_GP:WJG95400.1;Name=WJG95400.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=PUW34_12270;product=endonuclease SmrB;protein_id=WJG95400.1;transl_table=11 CP118122.1 Genbank gene 2482082 2482567 . - . ID=gene-PUW34_12275;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=PUW34_12275 CP118122.1 Protein Homology CDS 2482082 2482567 . - 0 ID=cds-WJG95401.1;Parent=gene-PUW34_12275;Dbxref=NCBI_GP:WJG95401.1;Name=WJG95401.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=PUW34_12275;product=phosphohistidine phosphatase SixA;protein_id=WJG95401.1;transl_table=11 CP118122.1 Genbank pseudogene 2482776 2484920 . - . ID=gene-PUW34_12280;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=pseudogene;locus_tag=PUW34_12280;pseudo=true CP118122.1 Protein Homology CDS 2482776 2484920 . - 0 ID=cds-PUW34_12280;Parent=gene-PUW34_12280;Note=frameshifted;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=PUW34_12280;product=fatty acid oxidation complex subunit alpha FadJ;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2484920 2486230 . - . ID=gene-PUW34_12285;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=pseudogene;locus_tag=PUW34_12285;pseudo=true CP118122.1 Protein Homology CDS 2484920 2486230 . - 0 ID=cds-PUW34_12285;Parent=gene-PUW34_12285;Note=frameshifted;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=PUW34_12285;product=acetyl-CoA C-acyltransferase FadI;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2486406 2486690 . - . ID=gene-PUW34_12290;Name=PUW34_12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12290 CP118122.1 Protein Homology CDS 2486406 2486690 . - 0 ID=cds-WJG95402.1;Parent=gene-PUW34_12290;Dbxref=NCBI_GP:WJG95402.1;Name=WJG95402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=PUW34_12290;product=YfcZ/YiiS family protein;protein_id=WJG95402.1;transl_table=11 CP118122.1 Genbank gene 2487061 2488368 . + . ID=gene-PUW34_12295;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=PUW34_12295 CP118122.1 Protein Homology CDS 2487061 2488368 . + 0 ID=cds-WJG95403.1;Parent=gene-PUW34_12295;Dbxref=NCBI_GP:WJG95403.1;Name=WJG95403.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=PUW34_12295;product=long-chain fatty acid transporter FadL;protein_id=WJG95403.1;transl_table=11 CP118122.1 Genbank gene 2488429 2489184 . - . ID=gene-PUW34_12300;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=PUW34_12300 CP118122.1 Protein Homology CDS 2488429 2489184 . - 0 ID=cds-WJG95404.1;Parent=gene-PUW34_12300;Dbxref=NCBI_GP:WJG95404.1;Name=WJG95404.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=PUW34_12300;product=phospholipid-binding lipoprotein MlaA;protein_id=WJG95404.1;transl_table=11 CP118122.1 Genbank gene 2489473 2490414 . + . ID=gene-PUW34_12305;Name=PUW34_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12305 CP118122.1 Protein Homology CDS 2489473 2490414 . + 0 ID=cds-WJG95405.1;Parent=gene-PUW34_12305;Dbxref=NCBI_GP:WJG95405.1;Name=WJG95405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=PUW34_12305;product=formate/nitrite transporter family protein;protein_id=WJG95405.1;transl_table=11 CP118122.1 Genbank gene 2490490 2490564 . + . ID=gene-PUW34_12310;Name=PUW34_12310;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_12310 CP118122.1 tRNAscan-SE tRNA 2490490 2490564 . + . ID=rna-PUW34_12310;Parent=gene-PUW34_12310;anticodon=(pos:2490523..2490525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12310;product=tRNA-Arg CP118122.1 tRNAscan-SE exon 2490490 2490564 . + . ID=exon-PUW34_12310-1;Parent=rna-PUW34_12310;anticodon=(pos:2490523..2490525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12310;product=tRNA-Arg CP118122.1 Genbank pseudogene 2490712 2491336 . - . ID=gene-PUW34_12315;Name=PUW34_12315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12315;pseudo=true CP118122.1 Protein Homology CDS 2490712 2491336 . - 0 ID=cds-PUW34_12315;Parent=gene-PUW34_12315;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=PUW34_12315;product=transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2491657 2492046 . + . ID=gene-PUW34_12320;Name=PUW34_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12320 CP118122.1 Protein Homology CDS 2491657 2492046 . + 0 ID=cds-WJG95406.1;Parent=gene-PUW34_12320;Dbxref=NCBI_GP:WJG95406.1;Name=WJG95406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696807.1;locus_tag=PUW34_12320;product=GtrA family protein;protein_id=WJG95406.1;transl_table=11 CP118122.1 Genbank pseudogene 2492015 2492233 . + . ID=gene-PUW34_12325;Name=PUW34_12325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12325;pseudo=true CP118122.1 Protein Homology CDS 2492015 2492233 . + 0 ID=cds-PUW34_12325;Parent=gene-PUW34_12325;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=PUW34_12325;product=glycosyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2492287 2494209 . + . ID=gene-PUW34_12330;Name=PUW34_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12330 CP118122.1 Protein Homology CDS 2492287 2494209 . + 0 ID=cds-WJG95407.1;Parent=gene-PUW34_12330;Dbxref=NCBI_GP:WJG95407.1;Name=WJG95407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400614.1;locus_tag=PUW34_12330;product=acyltransferase family protein;protein_id=WJG95407.1;transl_table=11 CP118122.1 Genbank pseudogene 2494380 2494826 . - . ID=gene-PUW34_12335;Name=PUW34_12335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12335;pseudo=true CP118122.1 Protein Homology CDS 2494380 2494826 . - 0 ID=cds-PUW34_12335;Parent=gene-PUW34_12335;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=PUW34_12335;product=transposase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2495199 2495525 . - . ID=gene-PUW34_12340;Name=PUW34_12340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12340;pseudo=true CP118122.1 Protein Homology CDS 2495199 2495525 . - 0 ID=cds-PUW34_12340;Parent=gene-PUW34_12340;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020812.2;locus_tag=PUW34_12340;product=tail spike protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2495720 2496657 . - . ID=gene-PUW34_12345;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=pseudogene;locus_tag=PUW34_12345;pseudo=true CP118122.1 Protein Homology CDS 2495720 2496657 . - 0 ID=cds-PUW34_12345;Parent=gene-PUW34_12345;Note=frameshifted;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=PUW34_12345;product=omptin family outer membrane protease PgtE;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2496925 2498172 . - . ID=gene-PUW34_12350;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=PUW34_12350 CP118122.1 Protein Homology CDS 2496925 2498172 . - 0 ID=cds-WJG98989.1;Parent=gene-PUW34_12350;Dbxref=NCBI_GP:WJG98989.1;Name=WJG98989.1;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=PUW34_12350;product=two-component system response regulator PgtA;protein_id=WJG98989.1;transl_table=11 CP118122.1 Genbank gene 2498162 2500168 . - . ID=gene-PUW34_12355;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=PUW34_12355 CP118122.1 Protein Homology CDS 2498162 2500168 . - 0 ID=cds-WJG95408.1;Parent=gene-PUW34_12355;Dbxref=NCBI_GP:WJG95408.1;Name=WJG95408.1;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=PUW34_12355;product=two-component system sensor histidine kinase PgtB;protein_id=WJG95408.1;transl_table=11 CP118122.1 Genbank gene 2500165 2501358 . - . ID=gene-PUW34_12360;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=PUW34_12360 CP118122.1 Protein Homology CDS 2500165 2501358 . - 0 ID=cds-WJG98990.1;Parent=gene-PUW34_12360;Dbxref=NCBI_GP:WJG98990.1;Name=WJG98990.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=PUW34_12360;product=phosphoglycerate transport regulator PgtC;protein_id=WJG98990.1;transl_table=11 CP118122.1 Genbank pseudogene 2501794 2503183 . + . ID=gene-PUW34_12365;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=pseudogene;locus_tag=PUW34_12365;pseudo=true CP118122.1 Protein Homology CDS 2501794 2503183 . + 0 ID=cds-PUW34_12365;Parent=gene-PUW34_12365;Note=frameshifted;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=PUW34_12365;product=phosphoglycerate transporter PgtP;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2503458 2503700 . - . ID=gene-PUW34_12370;Name=PUW34_12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12370 CP118122.1 Protein Homology CDS 2503458 2503700 . - 0 ID=cds-WJG95409.1;Parent=gene-PUW34_12370;Dbxref=NCBI_GP:WJG95409.1;Name=WJG95409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=PUW34_12370;product=YfdY family protein;protein_id=WJG95409.1;transl_table=11 CP118122.1 Genbank gene 2504222 2505142 . + . ID=gene-PUW34_12375;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=PUW34_12375 CP118122.1 Protein Homology CDS 2504222 2505142 . + 0 ID=cds-WJG95410.1;Parent=gene-PUW34_12375;Dbxref=NCBI_GP:WJG95410.1;Name=WJG95410.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=PUW34_12375;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WJG95410.1;transl_table=11 CP118122.1 Genbank gene 2505545 2505616 . + . ID=gene-PUW34_12380;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=PUW34_12380 CP118122.1 Protein Homology CDS 2505545 2505616 . + 0 ID=cds-WJG98991.1;Parent=gene-PUW34_12380;Dbxref=NCBI_GP:WJG98991.1;Name=WJG98991.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=PUW34_12380;product=membrane protein YpdK;protein_id=WJG98991.1;transl_table=11 CP118122.1 Genbank gene 2505666 2506904 . - . ID=gene-PUW34_12385;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=PUW34_12385 CP118122.1 Protein Homology CDS 2505666 2506904 . - 0 ID=cds-WJG95411.1;Parent=gene-PUW34_12385;Dbxref=NCBI_GP:WJG95411.1;Name=WJG95411.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=PUW34_12385;product=alanine transaminase;protein_id=WJG95411.1;transl_table=11 CP118122.1 Genbank gene 2507627 2508592 . - . ID=gene-PUW34_12390;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=PUW34_12390 CP118122.1 Protein Homology CDS 2507627 2508592 . - 0 ID=cds-WJG95412.1;Parent=gene-PUW34_12390;Dbxref=NCBI_GP:WJG95412.1;Name=WJG95412.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=PUW34_12390;product=glucokinase;protein_id=WJG95412.1;transl_table=11 CP118122.1 Genbank gene 2508796 2510037 . + . ID=gene-PUW34_12395;Name=PUW34_12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12395 CP118122.1 Protein Homology CDS 2508796 2510037 . + 0 ID=cds-WJG95413.1;Parent=gene-PUW34_12395;Dbxref=NCBI_GP:WJG95413.1;Name=WJG95413.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=PUW34_12395;product=ion channel protein;protein_id=WJG95413.1;transl_table=11 CP118122.1 Genbank gene 2510057 2511709 . - . ID=gene-PUW34_12400;Name=PUW34_12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12400 CP118122.1 Protein Homology CDS 2510057 2511709 . - 0 ID=cds-WJG95414.1;Parent=gene-PUW34_12400;Dbxref=NCBI_GP:WJG95414.1;Name=WJG95414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=PUW34_12400;product=alpha-keto acid decarboxylase family protein;protein_id=WJG95414.1;transl_table=11 CP118122.1 Genbank gene 2511889 2512887 . + . ID=gene-PUW34_12405;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=PUW34_12405 CP118122.1 Protein Homology CDS 2511889 2512887 . + 0 ID=cds-WJG95415.1;Parent=gene-PUW34_12405;Dbxref=NCBI_GP:WJG95415.1;Name=WJG95415.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=PUW34_12405;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WJG95415.1;transl_table=11 CP118122.1 Genbank gene 2513001 2513327 . + . ID=gene-PUW34_12410;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=PUW34_12410 CP118122.1 Protein Homology CDS 2513001 2513327 . + 0 ID=cds-WJG95416.1;Parent=gene-PUW34_12410;Dbxref=NCBI_GP:WJG95416.1;Name=WJG95416.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=PUW34_12410;product=DUF2502 domain-containing protein YpeC;protein_id=WJG95416.1;transl_table=11 CP118122.1 Genbank gene 2513388 2514629 . - . ID=gene-PUW34_12415;Name=PUW34_12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12415 CP118122.1 Protein Homology CDS 2513388 2514629 . - 0 ID=cds-WJG95417.1;Parent=gene-PUW34_12415;Dbxref=NCBI_GP:WJG95417.1;Name=WJG95417.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=PUW34_12415;product=Nramp family divalent metal transporter;protein_id=WJG95417.1;transl_table=11 CP118122.1 Genbank gene 2514972 2516174 . + . ID=gene-PUW34_12420;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=PUW34_12420 CP118122.1 Protein Homology CDS 2514972 2516174 . + 0 ID=cds-WJG95418.1;Parent=gene-PUW34_12420;Dbxref=NCBI_GP:WJG95418.1;Name=WJG95418.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=PUW34_12420;product=nucleoside permease NupC;protein_id=WJG95418.1;transl_table=11 CP118122.1 Genbank pseudogene 2516227 2518415 . - . ID=gene-PUW34_12425;Name=PUW34_12425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12425;pseudo=true CP118122.1 Protein Homology CDS 2516227 2518415 . - 0 ID=cds-PUW34_12425;Parent=gene-PUW34_12425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=PUW34_12425;product=sensor domain-containing phosphodiesterase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2518606 2518681 . - . ID=gene-PUW34_12430;Name=PUW34_12430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_12430 CP118122.1 tRNAscan-SE tRNA 2518606 2518681 . - . ID=rna-PUW34_12430;Parent=gene-PUW34_12430;anticodon=(pos:complement(2518646..2518648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12430;product=tRNA-Ala CP118122.1 tRNAscan-SE exon 2518606 2518681 . - . ID=exon-PUW34_12430-1;Parent=rna-PUW34_12430;anticodon=(pos:complement(2518646..2518648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12430;product=tRNA-Ala CP118122.1 Genbank gene 2518903 2519265 . + . ID=gene-PUW34_12435;Name=PUW34_12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12435 CP118122.1 Protein Homology CDS 2518903 2519265 . + 0 ID=cds-WJG95419.1;Parent=gene-PUW34_12435;Dbxref=NCBI_GP:WJG95419.1;Name=WJG95419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=PUW34_12435;product=putative DNA-binding transcriptional regulator;protein_id=WJG95419.1;transl_table=11 CP118122.1 Genbank gene 2519267 2519659 . + . ID=gene-PUW34_12440;Name=PUW34_12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12440 CP118122.1 Protein Homology CDS 2519267 2519659 . + 0 ID=cds-WJG95420.1;Parent=gene-PUW34_12440;Dbxref=NCBI_GP:WJG95420.1;Name=WJG95420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=PUW34_12440;product=putative DNA-binding transcriptional regulator;protein_id=WJG95420.1;transl_table=11 CP118122.1 Genbank gene 2519713 2521128 . - . ID=gene-PUW34_12445;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=PUW34_12445 CP118122.1 Protein Homology CDS 2519713 2521128 . - 0 ID=cds-WJG95421.1;Parent=gene-PUW34_12445;Dbxref=NCBI_GP:WJG95421.1;Name=WJG95421.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=PUW34_12445;product=glutamate--tRNA ligase;protein_id=WJG95421.1;transl_table=11 CP118122.1 Genbank gene 2521387 2521462 . + . ID=gene-PUW34_12450;Name=PUW34_12450;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_12450 CP118122.1 tRNAscan-SE tRNA 2521387 2521462 . + . ID=rna-PUW34_12450;Parent=gene-PUW34_12450;anticodon=(pos:2521420..2521422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12450;product=tRNA-Val CP118122.1 tRNAscan-SE exon 2521387 2521462 . + . ID=exon-PUW34_12450-1;Parent=rna-PUW34_12450;anticodon=(pos:2521420..2521422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12450;product=tRNA-Val CP118122.1 Genbank gene 2521508 2521583 . + . ID=gene-PUW34_12455;Name=PUW34_12455;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_12455 CP118122.1 tRNAscan-SE tRNA 2521508 2521583 . + . ID=rna-PUW34_12455;Parent=gene-PUW34_12455;anticodon=(pos:2521541..2521543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12455;product=tRNA-Val CP118122.1 tRNAscan-SE exon 2521508 2521583 . + . ID=exon-PUW34_12455-1;Parent=rna-PUW34_12455;anticodon=(pos:2521541..2521543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12455;product=tRNA-Val CP118122.1 Genbank gene 2521588 2521663 . + . ID=gene-PUW34_12460;Name=PUW34_12460;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_12460 CP118122.1 tRNAscan-SE tRNA 2521588 2521663 . + . ID=rna-PUW34_12460;Parent=gene-PUW34_12460;anticodon=(pos:2521621..2521623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12460;product=tRNA-Lys CP118122.1 tRNAscan-SE exon 2521588 2521663 . + . ID=exon-PUW34_12460-1;Parent=rna-PUW34_12460;anticodon=(pos:2521621..2521623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_12460;product=tRNA-Lys CP118122.1 Genbank pseudogene 2521827 2522710 . - . ID=gene-PUW34_12465;Name=PUW34_12465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12465;pseudo=true CP118122.1 Protein Homology CDS 2521827 2522710 . - 0 ID=cds-PUW34_12465;Parent=gene-PUW34_12465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=PUW34_12465;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2522762 2522920 . - . ID=gene-PUW34_12470;Name=PUW34_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12470 CP118122.1 Protein Homology CDS 2522762 2522920 . - 0 ID=cds-WJG95422.1;Parent=gene-PUW34_12470;Dbxref=NCBI_GP:WJG95422.1;Name=WJG95422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=PUW34_12470;product=DUF1427 family protein;protein_id=WJG95422.1;transl_table=11 CP118122.1 Genbank gene 2522979 2524235 . - . ID=gene-PUW34_12475;Name=PUW34_12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12475 CP118122.1 Protein Homology CDS 2522979 2524235 . - 0 ID=cds-WJG95423.1;Parent=gene-PUW34_12475;Dbxref=NCBI_GP:WJG95423.1;Name=WJG95423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=PUW34_12475;product=nucleoside permease;protein_id=WJG95423.1;transl_table=11 CP118122.1 Genbank gene 2524290 2525123 . - . ID=gene-PUW34_12480;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=PUW34_12480 CP118122.1 Protein Homology CDS 2524290 2525123 . - 0 ID=cds-WJG95424.1;Parent=gene-PUW34_12480;Dbxref=NCBI_GP:WJG95424.1;Name=WJG95424.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=xapA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=PUW34_12480;product=xanthosine phosphorylase;protein_id=WJG95424.1;transl_table=11 CP118122.1 Genbank gene 2525379 2526140 . + . ID=gene-PUW34_12485;Name=PUW34_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12485 CP118122.1 Protein Homology CDS 2525379 2526140 . + 0 ID=cds-WJG95425.1;Parent=gene-PUW34_12485;Dbxref=NCBI_GP:WJG95425.1;Name=WJG95425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=PUW34_12485;product=outer membrane protein;protein_id=WJG95425.1;transl_table=11 CP118122.1 Genbank pseudogene 2526202 2527127 . - . ID=gene-PUW34_12490;Name=PUW34_12490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12490;pseudo=true CP118122.1 Protein Homology CDS 2526202 2527127 . - 0 ID=cds-PUW34_12490;Parent=gene-PUW34_12490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=PUW34_12490;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2527217 2528215 . + . ID=gene-PUW34_12495;Name=PUW34_12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12495 CP118122.1 Protein Homology CDS 2527217 2528215 . + 0 ID=cds-WJG95426.1;Parent=gene-PUW34_12495;Dbxref=NCBI_GP:WJG95426.1;Name=WJG95426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=PUW34_12495;product=bile acid:sodium symporter;protein_id=WJG95426.1;transl_table=11 CP118122.1 Genbank gene 2528212 2528430 . - . ID=gene-PUW34_12500;Name=PUW34_12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12500 CP118122.1 Protein Homology CDS 2528212 2528430 . - 0 ID=cds-WJG95427.1;Parent=gene-PUW34_12500;Dbxref=NCBI_GP:WJG95427.1;Name=WJG95427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=PUW34_12500;product=DUF3820 family protein;protein_id=WJG95427.1;transl_table=11 CP118122.1 Genbank gene 2528432 2530447 . - . ID=gene-PUW34_12505;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=PUW34_12505 CP118122.1 Protein Homology CDS 2528432 2530447 . - 0 ID=cds-WJG95428.1;Parent=gene-PUW34_12505;Dbxref=NCBI_GP:WJG95428.1;Name=WJG95428.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=PUW34_12505;product=NAD-dependent DNA ligase LigA;protein_id=WJG95428.1;transl_table=11 CP118122.1 Genbank gene 2530519 2531505 . - . ID=gene-PUW34_12510;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=PUW34_12510 CP118122.1 Protein Homology CDS 2530519 2531505 . - 0 ID=cds-WJG95429.1;Parent=gene-PUW34_12510;Dbxref=NCBI_GP:WJG95429.1;Name=WJG95429.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=PUW34_12510;product=cell division protein ZipA;protein_id=WJG95429.1;transl_table=11 CP118122.1 Genbank gene 2531737 2532498 . + . ID=gene-PUW34_12515;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=PUW34_12515 CP118122.1 Protein Homology CDS 2531737 2532498 . + 0 ID=cds-WJG95430.1;Parent=gene-PUW34_12515;Dbxref=NCBI_GP:WJG95430.1;Name=WJG95430.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=PUW34_12515;product=sulfate transporter CysZ;protein_id=WJG95430.1;transl_table=11 CP118122.1 Genbank gene 2532662 2533633 . + . ID=gene-PUW34_12520;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=PUW34_12520 CP118122.1 Protein Homology CDS 2532662 2533633 . + 0 ID=cds-WJG95431.1;Parent=gene-PUW34_12520;Dbxref=NCBI_GP:WJG95431.1;Name=WJG95431.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=PUW34_12520;product=cysteine synthase A;protein_id=WJG95431.1;transl_table=11 CP118122.1 Genbank gene 2534017 2534274 . + . ID=gene-PUW34_12525;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=PUW34_12525 CP118122.1 Protein Homology CDS 2534017 2534274 . + 0 ID=cds-WJG95432.1;Parent=gene-PUW34_12525;Dbxref=NCBI_GP:WJG95432.1;Name=WJG95432.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=PUW34_12525;product=phosphocarrier protein Hpr;protein_id=WJG95432.1;transl_table=11 CP118122.1 Genbank gene 2534323 2536050 . + . ID=gene-PUW34_12530;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=PUW34_12530 CP118122.1 Protein Homology CDS 2534323 2536050 . + 0 ID=cds-WJG95433.1;Parent=gene-PUW34_12530;Dbxref=NCBI_GP:WJG95433.1;Name=WJG95433.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=PUW34_12530;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WJG95433.1;transl_table=11 CP118122.1 Genbank gene 2536091 2536600 . + . ID=gene-PUW34_12535;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=PUW34_12535 CP118122.1 Protein Homology CDS 2536091 2536600 . + 0 ID=cds-WJG95434.1;Parent=gene-PUW34_12535;Dbxref=NCBI_GP:WJG95434.1;Name=WJG95434.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=PUW34_12535;product=PTS glucose transporter subunit IIA;protein_id=WJG95434.1;transl_table=11 CP118122.1 Genbank gene 2536764 2537003 . - . ID=gene-PUW34_12540;Name=PUW34_12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12540 CP118122.1 Protein Homology CDS 2536764 2537003 . - 0 ID=cds-WJG95435.1;Parent=gene-PUW34_12540;Dbxref=NCBI_GP:WJG95435.1;Name=WJG95435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=PUW34_12540;product=cytoplasmic protein;protein_id=WJG95435.1;transl_table=11 CP118122.1 Genbank gene 2537000 2537866 . - . ID=gene-PUW34_12545;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=PUW34_12545 CP118122.1 Protein Homology CDS 2537000 2537866 . - 0 ID=cds-WJG95436.1;Parent=gene-PUW34_12545;Dbxref=NCBI_GP:WJG95436.1;Name=WJG95436.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=PUW34_12545;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WJG95436.1;transl_table=11 CP118122.1 Genbank gene 2537949 2539241 . + . ID=gene-PUW34_12550;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=PUW34_12550 CP118122.1 Protein Homology CDS 2537949 2539241 . + 0 ID=cds-WJG95437.1;Parent=gene-PUW34_12550;Dbxref=NCBI_GP:WJG95437.1;Name=WJG95437.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=PUW34_12550;product=transcriptional regulator PtsJ;protein_id=WJG95437.1;transl_table=11 CP118122.1 Genbank gene 2539256 2539975 . + . ID=gene-PUW34_12555;Name=PUW34_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12555 CP118122.1 Protein Homology CDS 2539256 2539975 . + 0 ID=cds-WJG95438.1;Parent=gene-PUW34_12555;Dbxref=NCBI_GP:WJG95438.1;Name=WJG95438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=PUW34_12555;product=GMP synthase;protein_id=WJG95438.1;transl_table=11 CP118122.1 Genbank gene 2540034 2540417 . + . ID=gene-PUW34_12560;Name=PUW34_12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12560 CP118122.1 Protein Homology CDS 2540034 2540417 . + 0 ID=cds-WJG95439.1;Parent=gene-PUW34_12560;Dbxref=NCBI_GP:WJG95439.1;Name=WJG95439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710732.1;locus_tag=PUW34_12560;product=YfeK family protein;protein_id=WJG95439.1;transl_table=11 CP118122.1 Genbank gene 2540517 2541125 . - . ID=gene-PUW34_12565;Name=PUW34_12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12565 CP118122.1 Protein Homology CDS 2540517 2541125 . - 0 ID=cds-WJG95440.1;Parent=gene-PUW34_12565;Dbxref=NCBI_GP:WJG95440.1;Name=WJG95440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666526.1;locus_tag=PUW34_12565;product=tetratricopeptide repeat protein;protein_id=WJG95440.1;transl_table=11 CP118122.1 Genbank gene 2541377 2542288 . - . ID=gene-PUW34_12570;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=PUW34_12570 CP118122.1 Protein Homology CDS 2541377 2542288 . - 0 ID=cds-WJG95441.1;Parent=gene-PUW34_12570;Dbxref=NCBI_GP:WJG95441.1;Name=WJG95441.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=PUW34_12570;product=cysteine synthase CysM;protein_id=WJG95441.1;transl_table=11 CP118122.1 Genbank gene 2542356 2543453 . - . ID=gene-PUW34_12575;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=PUW34_12575 CP118122.1 Protein Homology CDS 2542356 2543453 . - 0 ID=cds-WJG95442.1;Parent=gene-PUW34_12575;Dbxref=NCBI_GP:WJG95442.1;Name=WJG95442.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=PUW34_12575;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WJG95442.1;transl_table=11 CP118122.1 Genbank gene 2543443 2544318 . - . ID=gene-PUW34_12580;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=PUW34_12580 CP118122.1 Protein Homology CDS 2543443 2544318 . - 0 ID=cds-WJG95443.1;Parent=gene-PUW34_12580;Dbxref=NCBI_GP:WJG95443.1;Name=WJG95443.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=PUW34_12580;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WJG95443.1;transl_table=11 CP118122.1 Genbank gene 2544318 2545151 . - . ID=gene-PUW34_12585;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=PUW34_12585 CP118122.1 Protein Homology CDS 2544318 2545151 . - 0 ID=cds-WJG95444.1;Parent=gene-PUW34_12585;Dbxref=NCBI_GP:WJG95444.1;Name=WJG95444.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=PUW34_12585;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WJG95444.1;transl_table=11 CP118122.1 Genbank gene 2545151 2546167 . - . ID=gene-PUW34_12590;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=PUW34_12590 CP118122.1 Protein Homology CDS 2545151 2546167 . - 0 ID=cds-WJG95445.1;Parent=gene-PUW34_12590;Dbxref=NCBI_GP:WJG95445.1;Name=WJG95445.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=PUW34_12590;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WJG95445.1;transl_table=11 CP118122.1 Genbank gene 2546325 2547122 . - . ID=gene-PUW34_12595;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=PUW34_12595 CP118122.1 Protein Homology CDS 2546325 2547122 . - 0 ID=cds-WJG95446.1;Parent=gene-PUW34_12595;Dbxref=NCBI_GP:WJG95446.1;Name=WJG95446.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517461.1;locus_tag=PUW34_12595;product=SDR family oxidoreductase UcpA;protein_id=WJG95446.1;transl_table=11 CP118122.1 Genbank gene 2547359 2548258 . - . ID=gene-PUW34_12600;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=PUW34_12600 CP118122.1 Protein Homology CDS 2547359 2548258 . - 0 ID=cds-WJG95447.1;Parent=gene-PUW34_12600;Dbxref=NCBI_GP:WJG95447.1;Name=WJG95447.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=PUW34_12600;product=porphyrinogen peroxidase;protein_id=WJG95447.1;transl_table=11 CP118122.1 Genbank pseudogene 2548353 2548927 . - . ID=gene-PUW34_12605;Name=PUW34_12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12605;pseudo=true CP118122.1 Protein Homology CDS 2548353 2548927 . - 0 ID=cds-PUW34_12605;Parent=gene-PUW34_12605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=PUW34_12605;product=RpoE-regulated lipoprotein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2548989 2549437 . - . ID=gene-PUW34_12610;Name=PUW34_12610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12610;pseudo=true CP118122.1 Protein Homology CDS 2548989 2549437 . - 0 ID=cds-PUW34_12610;Parent=gene-PUW34_12610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=PUW34_12610;product=DUF2919 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2549424 2549849 . - . ID=gene-PUW34_12615;Name=PUW34_12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12615 CP118122.1 Protein Homology CDS 2549424 2549849 . - 0 ID=cds-WJG95448.1;Parent=gene-PUW34_12615;Dbxref=NCBI_GP:WJG95448.1;Name=WJG95448.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=PUW34_12615;product=GNAT family acetyltransferase;protein_id=WJG95448.1;transl_table=11 CP118122.1 Genbank gene 2550062 2550931 . + . ID=gene-PUW34_12620;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=PUW34_12620 CP118122.1 Protein Homology CDS 2550062 2550931 . + 0 ID=cds-WJG95449.1;Parent=gene-PUW34_12620;Dbxref=NCBI_GP:WJG95449.1;Name=WJG95449.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=PUW34_12620;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WJG95449.1;transl_table=11 CP118122.1 Genbank gene 2550934 2551833 . + . ID=gene-PUW34_12625;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=PUW34_12625 CP118122.1 Protein Homology CDS 2550934 2551833 . + 0 ID=cds-WJG95450.1;Parent=gene-PUW34_12625;Dbxref=NCBI_GP:WJG95450.1;Name=WJG95450.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=PUW34_12625;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WJG95450.1;transl_table=11 CP118122.1 Genbank gene 2551854 2552183 . + . ID=gene-PUW34_12630;Name=PUW34_12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12630 CP118122.1 Protein Homology CDS 2551854 2552183 . + 0 ID=cds-WJG95451.1;Parent=gene-PUW34_12630;Dbxref=NCBI_GP:WJG95451.1;Name=WJG95451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=PUW34_12630;product=hypothetical protein;protein_id=WJG95451.1;transl_table=11 CP118122.1 Genbank pseudogene 2552238 2552465 . + . ID=gene-PUW34_12635;Name=PUW34_12635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12635;pseudo=true CP118122.1 Protein Homology CDS 2552238 2552465 . + 0 ID=cds-PUW34_12635;Parent=gene-PUW34_12635;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=PUW34_12635;product=DUF1963 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2552632 2553684 . - . ID=gene-PUW34_12640;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=PUW34_12640 CP118122.1 Protein Homology CDS 2552632 2553684 . - 0 ID=cds-WJG95452.1;Parent=gene-PUW34_12640;Dbxref=NCBI_GP:WJG95452.1;Name=WJG95452.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=PUW34_12640;product=HTH-type transcriptional regulator EutR;protein_id=WJG95452.1;transl_table=11 CP118122.1 Genbank gene 2553732 2554226 . - . ID=gene-PUW34_12645;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=PUW34_12645 CP118122.1 Protein Homology CDS 2553732 2554226 . - 0 ID=cds-WJG95453.1;Parent=gene-PUW34_12645;Dbxref=NCBI_GP:WJG95453.1;Name=WJG95453.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=PUW34_12645;product=ethanolamine utilization microcompartment protein EutK;protein_id=WJG95453.1;transl_table=11 CP118122.1 Genbank gene 2554239 2554898 . - . ID=gene-PUW34_12650;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=PUW34_12650 CP118122.1 Protein Homology CDS 2554239 2554898 . - 0 ID=cds-WJG95454.1;Parent=gene-PUW34_12650;Dbxref=NCBI_GP:WJG95454.1;Name=WJG95454.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=PUW34_12650;product=ethanolamine utilization microcompartment protein EutL;protein_id=WJG95454.1;transl_table=11 CP118122.1 Genbank pseudogene 2554908 2555803 . - . ID=gene-PUW34_12655;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=pseudogene;locus_tag=PUW34_12655;pseudo=true CP118122.1 Protein Homology CDS 2554908 2555803 . - 0 ID=cds-PUW34_12655;Parent=gene-PUW34_12655;Note=frameshifted;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=PUW34_12655;product=ethanolamine ammonia-lyase subunit EutC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2555822 2557183 . - . ID=gene-PUW34_12660;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=PUW34_12660 CP118122.1 Protein Homology CDS 2555822 2557183 . - 0 ID=cds-WJG95455.1;Parent=gene-PUW34_12660;Dbxref=NCBI_GP:WJG95455.1;Name=WJG95455.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=PUW34_12660;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WJG95455.1;transl_table=11 CP118122.1 Genbank gene 2557195 2558598 . - . ID=gene-PUW34_12665;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=PUW34_12665 CP118122.1 Protein Homology CDS 2557195 2558598 . - 0 ID=cds-WJG95456.1;Parent=gene-PUW34_12665;Dbxref=NCBI_GP:WJG95456.1;Name=WJG95456.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=PUW34_12665;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WJG95456.1;transl_table=11 CP118122.1 Genbank gene 2558595 2559821 . - . ID=gene-PUW34_12670;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=PUW34_12670 CP118122.1 Protein Homology CDS 2558595 2559821 . - 0 ID=cds-WJG95457.1;Parent=gene-PUW34_12670;Dbxref=NCBI_GP:WJG95457.1;Name=WJG95457.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=PUW34_12670;product=ethanolamine utilization protein EutH;protein_id=WJG95457.1;transl_table=11 CP118122.1 Genbank gene 2559941 2561128 . - . ID=gene-PUW34_12675;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=PUW34_12675 CP118122.1 Protein Homology CDS 2559941 2561128 . - 0 ID=cds-WJG95458.1;Parent=gene-PUW34_12675;Dbxref=NCBI_GP:WJG95458.1;Name=WJG95458.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=PUW34_12675;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WJG95458.1;transl_table=11 CP118122.1 Genbank gene 2561118 2561957 . - . ID=gene-PUW34_12680;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=PUW34_12680 CP118122.1 Protein Homology CDS 2561118 2561957 . - 0 ID=cds-WJG95459.1;Parent=gene-PUW34_12680;Dbxref=NCBI_GP:WJG95459.1;Name=WJG95459.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=PUW34_12680;product=ethanolamine utilization protein EutJ;protein_id=WJG95459.1;transl_table=11 CP118122.1 Genbank gene 2561968 2563371 . - . ID=gene-PUW34_12685;Name=PUW34_12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12685 CP118122.1 Protein Homology CDS 2561968 2563371 . - 0 ID=cds-WJG95460.1;Parent=gene-PUW34_12685;Dbxref=NCBI_GP:WJG95460.1;Name=WJG95460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=PUW34_12685;product=aldehyde dehydrogenase EutE;protein_id=WJG95460.1;transl_table=11 CP118122.1 Genbank gene 2563383 2563670 . - . ID=gene-PUW34_12690;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=PUW34_12690 CP118122.1 Protein Homology CDS 2563383 2563670 . - 0 ID=cds-WJG95461.1;Parent=gene-PUW34_12690;Dbxref=NCBI_GP:WJG95461.1;Name=WJG95461.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=PUW34_12690;product=ethanolamine utilization microcompartment protein EutN;protein_id=WJG95461.1;transl_table=11 CP118122.1 Genbank gene 2563783 2564073 . - . ID=gene-PUW34_12695;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=PUW34_12695 CP118122.1 Protein Homology CDS 2563783 2564073 . - 0 ID=cds-WJG95462.1;Parent=gene-PUW34_12695;Dbxref=NCBI_GP:WJG95462.1;Name=WJG95462.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=PUW34_12695;product=ethanolamine utilization microcompartment protein EutM;protein_id=WJG95462.1;transl_table=11 CP118122.1 Genbank gene 2564114 2565130 . - . ID=gene-PUW34_12700;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PUW34_12700 CP118122.1 Protein Homology CDS 2564114 2565130 . - 0 ID=cds-WJG95463.1;Parent=gene-PUW34_12700;Dbxref=NCBI_GP:WJG95463.1;Name=WJG95463.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=PUW34_12700;product=phosphate acetyltransferase;protein_id=WJG95463.1;transl_table=11 CP118122.1 Genbank gene 2565127 2565930 . - . ID=gene-PUW34_12705;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=PUW34_12705 CP118122.1 Protein Homology CDS 2565127 2565930 . - 0 ID=cds-WJG95464.1;Parent=gene-PUW34_12705;Dbxref=NCBI_GP:WJG95464.1;Name=WJG95464.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=PUW34_12705;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WJG95464.1;transl_table=11 CP118122.1 Genbank gene 2565927 2566616 . - . ID=gene-PUW34_12710;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=PUW34_12710 CP118122.1 Protein Homology CDS 2565927 2566616 . - 0 ID=cds-WJG95465.1;Parent=gene-PUW34_12710;Dbxref=NCBI_GP:WJG95465.1;Name=WJG95465.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=PUW34_12710;product=ethanolamine utilization acetate kinase EutQ;protein_id=WJG95465.1;transl_table=11 CP118122.1 Genbank gene 2566594 2567073 . - . ID=gene-PUW34_12715;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=PUW34_12715 CP118122.1 Protein Homology CDS 2566594 2567073 . - 0 ID=cds-WJG95466.1;Parent=gene-PUW34_12715;Dbxref=NCBI_GP:WJG95466.1;Name=WJG95466.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=PUW34_12715;product=ethanolamine utilization acetate kinase EutP;protein_id=WJG95466.1;transl_table=11 CP118122.1 Genbank gene 2567086 2567421 . - . ID=gene-PUW34_12720;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=PUW34_12720 CP118122.1 Protein Homology CDS 2567086 2567421 . - 0 ID=cds-WJG95467.1;Parent=gene-PUW34_12720;Dbxref=NCBI_GP:WJG95467.1;Name=WJG95467.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=PUW34_12720;product=ethanolamine utilization microcompartment protein EutS;protein_id=WJG95467.1;transl_table=11 CP118122.1 Genbank pseudogene 2567838 2570114 . - . ID=gene-PUW34_12725;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=pseudogene;locus_tag=PUW34_12725;pseudo=true CP118122.1 Protein Homology CDS 2567838 2570114 . - 0 ID=cds-PUW34_12725;Parent=gene-PUW34_12725;Note=frameshifted;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=PUW34_12725;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2570386 2571336 . + . ID=gene-PUW34_12730;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PUW34_12730 CP118122.1 Protein Homology CDS 2570386 2571336 . + 0 ID=cds-WJG95468.1;Parent=gene-PUW34_12730;Dbxref=NCBI_GP:WJG95468.1;Name=WJG95468.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=PUW34_12730;product=transaldolase;protein_id=WJG95468.1;transl_table=11 CP118122.1 Genbank pseudogene 2571356 2573355 . + . ID=gene-PUW34_12735;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=pseudogene;locus_tag=PUW34_12735;pseudo=true CP118122.1 Protein Homology CDS 2571356 2573355 . + 0 ID=cds-PUW34_12735;Parent=gene-PUW34_12735;Note=frameshifted;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=PUW34_12735;product=transketolase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2573418 2573648 . - . ID=gene-PUW34_12740;Name=PUW34_12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12740 CP118122.1 Protein Homology CDS 2573418 2573648 . - 0 ID=cds-WJG98992.1;Parent=gene-PUW34_12740;Dbxref=NCBI_GP:WJG98992.1;Name=WJG98992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=PUW34_12740;product=hypothetical protein;protein_id=WJG98992.1;transl_table=11 CP118122.1 Genbank gene 2573776 2574819 . - . ID=gene-PUW34_12745;Name=PUW34_12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12745 CP118122.1 Protein Homology CDS 2573776 2574819 . - 0 ID=cds-WJG95469.1;Parent=gene-PUW34_12745;Dbxref=NCBI_GP:WJG95469.1;Name=WJG95469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=PUW34_12745;product=DUF1176 domain-containing protein;protein_id=WJG95469.1;transl_table=11 CP118122.1 Genbank gene 2574944 2575519 . - . ID=gene-PUW34_12750;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=PUW34_12750 CP118122.1 Protein Homology CDS 2574944 2575519 . - 0 ID=cds-WJG95470.1;Parent=gene-PUW34_12750;Dbxref=NCBI_GP:WJG95470.1;Name=WJG95470.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=PUW34_12750;product=GDP-mannose pyrophosphatase NudK;protein_id=WJG95470.1;transl_table=11 CP118122.1 Genbank gene 2575723 2577021 . + . ID=gene-PUW34_12755;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=PUW34_12755 CP118122.1 Protein Homology CDS 2575723 2577021 . + 0 ID=cds-WJG95471.1;Parent=gene-PUW34_12755;Dbxref=NCBI_GP:WJG95471.1;Name=WJG95471.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=PUW34_12755;product=penicillin binding protein PBP4B;protein_id=WJG95471.1;transl_table=11 CP118122.1 Genbank pseudogene 2577470 2579430 . - . ID=gene-PUW34_12760;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=pseudogene;locus_tag=PUW34_12760;pseudo=true CP118122.1 Protein Homology CDS 2577470 2579430 . - 0 ID=cds-PUW34_12760;Parent=gene-PUW34_12760;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=PUW34_12760;product=formate-dependent uric acid utilization protein AegA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2579616 2581316 . + . ID=gene-PUW34_12765;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=PUW34_12765 CP118122.1 Protein Homology CDS 2579616 2581316 . + 0 ID=cds-WJG95472.1;Parent=gene-PUW34_12765;Dbxref=NCBI_GP:WJG95472.1;Name=WJG95472.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=PUW34_12765;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WJG95472.1;transl_table=11 CP118122.1 Genbank pseudogene 2581501 2584613 . + . ID=gene-PUW34_12770;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=pseudogene;locus_tag=PUW34_12770;pseudo=true CP118122.1 Protein Homology CDS 2581501 2584613 . + 0 ID=cds-PUW34_12770;Parent=gene-PUW34_12770;Note=frameshifted%3B internal stop;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=PUW34_12770;product=multidrug efflux RND transporter permease AcrD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2584715 2584774 . - . ID=gene-PUW34_12775;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=PUW34_12775 CP118122.1 Protein Homology CDS 2584715 2584774 . - 0 ID=cds-WJG98993.1;Parent=gene-PUW34_12775;Dbxref=NCBI_GP:WJG98993.1;Name=WJG98993.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=PUW34_12775;product=protein YpfM;protein_id=WJG98993.1;transl_table=11 CP118122.1 Genbank gene 2585187 2585543 . + . ID=gene-PUW34_12780;Name=PUW34_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12780 CP118122.1 Protein Homology CDS 2585187 2585543 . + 0 ID=cds-WJG95473.1;Parent=gene-PUW34_12780;Dbxref=NCBI_GP:WJG95473.1;Name=WJG95473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=PUW34_12780;product=ArsC family reductase;protein_id=WJG95473.1;transl_table=11 CP118122.1 Genbank gene 2585547 2586674 . + . ID=gene-PUW34_12785;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=PUW34_12785 CP118122.1 Protein Homology CDS 2585547 2586674 . + 0 ID=cds-WJG95474.1;Parent=gene-PUW34_12785;Dbxref=NCBI_GP:WJG95474.1;Name=WJG95474.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=PUW34_12785;product=succinyl-diaminopimelate desuccinylase;protein_id=WJG95474.1;transl_table=11 CP118122.1 Genbank gene 2586702 2586902 . + . ID=gene-PUW34_12790;Name=PUW34_12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12790 CP118122.1 Protein Homology CDS 2586702 2586902 . + 0 ID=cds-WJG95475.1;Parent=gene-PUW34_12790;Dbxref=NCBI_GP:WJG95475.1;Name=WJG95475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=PUW34_12790;product=YpfN family protein;protein_id=WJG95475.1;transl_table=11 CP118122.1 Genbank gene 2586929 2588947 . - . ID=gene-PUW34_12795;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=PUW34_12795 CP118122.1 Protein Homology CDS 2586929 2588947 . - 0 ID=cds-WJG95476.1;Parent=gene-PUW34_12795;Dbxref=NCBI_GP:WJG95476.1;Name=WJG95476.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=PUW34_12795;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WJG95476.1;transl_table=11 CP118122.1 Genbank gene 2588963 2589826 . - . ID=gene-PUW34_12800;Name=PUW34_12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12800 CP118122.1 Protein Homology CDS 2588963 2589826 . - 0 ID=cds-WJG95477.1;Parent=gene-PUW34_12800;Dbxref=NCBI_GP:WJG95477.1;Name=WJG95477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=PUW34_12800;product=neutral zinc metallopeptidase;protein_id=WJG95477.1;transl_table=11 CP118122.1 Genbank gene 2589957 2590670 . - . ID=gene-PUW34_12805;Name=PUW34_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12805 CP118122.1 Protein Homology CDS 2589957 2590670 . - 0 ID=cds-WJG95478.1;Parent=gene-PUW34_12805;Dbxref=NCBI_GP:WJG95478.1;Name=WJG95478.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=PUW34_12805;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WJG95478.1;transl_table=11 CP118122.1 Genbank gene 2590845 2591879 . - . ID=gene-PUW34_12810;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=PUW34_12810 CP118122.1 Protein Homology CDS 2590845 2591879 . - 0 ID=cds-WJG95479.1;Parent=gene-PUW34_12810;Dbxref=NCBI_GP:WJG95479.1;Name=WJG95479.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=PUW34_12810;product=outer membrane protein assembly factor BamC;protein_id=WJG95479.1;transl_table=11 CP118122.1 Genbank gene 2591896 2592774 . - . ID=gene-PUW34_12815;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=PUW34_12815 CP118122.1 Protein Homology CDS 2591896 2592774 . - 0 ID=cds-WJG95480.1;Parent=gene-PUW34_12815;Dbxref=NCBI_GP:WJG95480.1;Name=WJG95480.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=PUW34_12815;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WJG95480.1;transl_table=11 CP118122.1 Genbank pseudogene 2592920 2593491 . + . ID=gene-PUW34_12820;Name=PUW34_12820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12820;pseudo=true CP118122.1 Protein Homology CDS 2592920 2593491 . + 0 ID=cds-PUW34_12820;Parent=gene-PUW34_12820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=PUW34_12820;product=glycine cleavage system transcriptional repressor;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2593491 2593961 . + . ID=gene-PUW34_12825;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=PUW34_12825 CP118122.1 Protein Homology CDS 2593491 2593961 . + 0 ID=cds-WJG95481.1;Parent=gene-PUW34_12825;Dbxref=NCBI_GP:WJG95481.1;Name=WJG95481.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=PUW34_12825;product=thioredoxin-dependent thiol peroxidase;protein_id=WJG95481.1;transl_table=11 CP118122.1 Genbank gene 2594008 2595147 . - . ID=gene-PUW34_12830;Name=PUW34_12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12830 CP118122.1 Protein Homology CDS 2594008 2595147 . - 0 ID=cds-WJG95482.1;Parent=gene-PUW34_12830;Dbxref=NCBI_GP:WJG95482.1;Name=WJG95482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=PUW34_12830;product=glycerate kinase;protein_id=WJG95482.1;transl_table=11 CP118122.1 Genbank gene 2595153 2596421 . - . ID=gene-PUW34_12835;Name=PUW34_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12835 CP118122.1 Protein Homology CDS 2595153 2596421 . - 0 ID=cds-WJG95483.1;Parent=gene-PUW34_12835;Dbxref=NCBI_GP:WJG95483.1;Name=WJG95483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=PUW34_12835;product=GntP family permease;protein_id=WJG95483.1;transl_table=11 CP118122.1 Genbank gene 2596489 2597676 . - . ID=gene-PUW34_12840;Name=PUW34_12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12840 CP118122.1 Protein Homology CDS 2596489 2597676 . - 0 ID=cds-WJG95484.1;Parent=gene-PUW34_12840;Dbxref=NCBI_GP:WJG95484.1;Name=WJG95484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=PUW34_12840;product=sugar diacid recognition domain-containing protein;protein_id=WJG95484.1;transl_table=11 CP118122.1 Genbank pseudogene 2597952 2599018 . - . ID=gene-PUW34_12845;Name=PUW34_12845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12845;pseudo=true CP118122.1 Protein Homology CDS 2597952 2599018 . - 0 ID=cds-PUW34_12845;Parent=gene-PUW34_12845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=PUW34_12845;product=AI-2E family transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2599226 2600689 . + . ID=gene-PUW34_12850;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=PUW34_12850 CP118122.1 Protein Homology CDS 2599226 2600689 . + 0 ID=cds-WJG95485.1;Parent=gene-PUW34_12850;Dbxref=NCBI_GP:WJG95485.1;Name=WJG95485.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=PUW34_12850;product=beta-barrel assembly-enhancing protease;protein_id=WJG95485.1;transl_table=11 CP118122.1 Genbank gene 2600729 2601088 . + . ID=gene-PUW34_12855;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PUW34_12855 CP118122.1 Protein Homology CDS 2600729 2601088 . + 0 ID=cds-WJG95486.1;Parent=gene-PUW34_12855;Dbxref=NCBI_GP:WJG95486.1;Name=WJG95486.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=PUW34_12855;product=arsenate reductase (glutaredoxin);protein_id=WJG95486.1;transl_table=11 CP118122.1 Genbank gene 2601115 2601816 . - . ID=gene-PUW34_12860;Name=PUW34_12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12860 CP118122.1 Protein Homology CDS 2601115 2601816 . - 0 ID=cds-WJG98994.1;Parent=gene-PUW34_12860;Dbxref=NCBI_GP:WJG98994.1;Name=WJG98994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=PUW34_12860;product=DnaA inactivator Hda;protein_id=WJG98994.1;transl_table=11 CP118122.1 Genbank gene 2601911 2603200 . - . ID=gene-PUW34_12865;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=PUW34_12865 CP118122.1 Protein Homology CDS 2601911 2603200 . - 0 ID=cds-WJG95487.1;Parent=gene-PUW34_12865;Dbxref=NCBI_GP:WJG95487.1;Name=WJG95487.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=PUW34_12865;product=uracil permease;protein_id=WJG95487.1;transl_table=11 CP118122.1 Genbank gene 2603287 2603913 . - . ID=gene-PUW34_12870;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=PUW34_12870 CP118122.1 Protein Homology CDS 2603287 2603913 . - 0 ID=cds-WJG95488.1;Parent=gene-PUW34_12870;Dbxref=NCBI_GP:WJG95488.1;Name=WJG95488.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=PUW34_12870;product=uracil phosphoribosyltransferase;protein_id=WJG95488.1;transl_table=11 CP118122.1 Genbank gene 2604325 2605362 . + . ID=gene-PUW34_12875;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=PUW34_12875 CP118122.1 Protein Homology CDS 2604325 2605362 . + 0 ID=cds-WJG95489.1;Parent=gene-PUW34_12875;Dbxref=NCBI_GP:WJG95489.1;Name=WJG95489.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=PUW34_12875;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WJG95489.1;transl_table=11 CP118122.1 Genbank gene 2605362 2606000 . + . ID=gene-PUW34_12880;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=PUW34_12880 CP118122.1 Protein Homology CDS 2605362 2606000 . + 0 ID=cds-WJG95490.1;Parent=gene-PUW34_12880;Dbxref=NCBI_GP:WJG95490.1;Name=WJG95490.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=PUW34_12880;product=phosphoribosylglycinamide formyltransferase;protein_id=WJG95490.1;transl_table=11 CP118122.1 Genbank gene 2606189 2608255 . + . ID=gene-PUW34_12885;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=PUW34_12885 CP118122.1 Protein Homology CDS 2606189 2608255 . + 0 ID=cds-WJG95491.1;Parent=gene-PUW34_12885;Dbxref=NCBI_GP:WJG95491.1;Name=WJG95491.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=PUW34_12885;product=polyphosphate kinase 1;protein_id=WJG95491.1;transl_table=11 CP118122.1 Genbank gene 2608260 2609801 . + . ID=gene-PUW34_12890;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=PUW34_12890 CP118122.1 Protein Homology CDS 2608260 2609801 . + 0 ID=cds-WJG98995.1;Parent=gene-PUW34_12890;Dbxref=NCBI_GP:WJG98995.1;Name=WJG98995.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=PUW34_12890;product=exopolyphosphatase;protein_id=WJG98995.1;transl_table=11 CP118122.1 Genbank gene 2609837 2612050 . - . ID=gene-PUW34_12895;Name=PUW34_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12895 CP118122.1 Protein Homology CDS 2609837 2612050 . - 0 ID=cds-WJG95492.1;Parent=gene-PUW34_12895;Dbxref=NCBI_GP:WJG95492.1;Name=WJG95492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=PUW34_12895;product=sensor domain-containing phosphodiesterase;protein_id=WJG95492.1;transl_table=11 CP118122.1 Genbank gene 2612147 2612284 . - . ID=gene-PUW34_12900;Name=PUW34_12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12900 CP118122.1 Protein Homology CDS 2612147 2612284 . - 0 ID=cds-WJG95493.1;Parent=gene-PUW34_12900;Dbxref=NCBI_GP:WJG95493.1;Name=WJG95493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=PUW34_12900;product=hypothetical protein;protein_id=WJG95493.1;transl_table=11 CP118122.1 Genbank gene 2612463 2612654 . + . ID=gene-PUW34_12905;Name=PUW34_12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12905 CP118122.1 Protein Homology CDS 2612463 2612654 . + 0 ID=cds-WJG95494.1;Parent=gene-PUW34_12905;Dbxref=NCBI_GP:WJG95494.1;Name=WJG95494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=PUW34_12905;product=YfgG family protein;protein_id=WJG95494.1;transl_table=11 CP118122.1 Genbank pseudogene 2612732 2612875 . - . ID=gene-PUW34_12910;Name=PUW34_12910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12910;pseudo=true CP118122.1 Protein Homology CDS 2612732 2612875 . - 0 ID=cds-PUW34_12910;Parent=gene-PUW34_12910;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=PUW34_12910;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2613348 2613677 . + . ID=gene-PUW34_12915;Name=PUW34_12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12915 CP118122.1 Protein Homology CDS 2613348 2613677 . + 0 ID=cds-WJG95495.1;Parent=gene-PUW34_12915;Dbxref=NCBI_GP:WJG95495.1;Name=WJG95495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=PUW34_12915;product=DUF1493 family protein;protein_id=WJG95495.1;transl_table=11 CP118122.1 Genbank pseudogene 2613757 2614065 . - . ID=gene-PUW34_12920;Name=PUW34_12920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12920;pseudo=true CP118122.1 Protein Homology CDS 2613757 2614065 . - 0 ID=cds-PUW34_12920;Parent=gene-PUW34_12920;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611898.1;locus_tag=PUW34_12920;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2614207 2615784 . - . ID=gene-PUW34_12925;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=PUW34_12925 CP118122.1 Protein Homology CDS 2614207 2615784 . - 0 ID=cds-WJG95496.1;Parent=gene-PUW34_12925;Dbxref=NCBI_GP:WJG95496.1;Name=WJG95496.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=PUW34_12925;product=glutamine-hydrolyzing GMP synthase;protein_id=WJG95496.1;transl_table=11 CP118122.1 Genbank gene 2615854 2617320 . - . ID=gene-PUW34_12930;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=PUW34_12930 CP118122.1 Protein Homology CDS 2615854 2617320 . - 0 ID=cds-WJG95497.1;Parent=gene-PUW34_12930;Dbxref=NCBI_GP:WJG95497.1;Name=WJG95497.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=PUW34_12930;product=IMP dehydrogenase;protein_id=WJG95497.1;transl_table=11 CP118122.1 Genbank gene 2617481 2618830 . + . ID=gene-PUW34_12935;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=PUW34_12935 CP118122.1 Protein Homology CDS 2617481 2618830 . + 0 ID=cds-WJG95498.1;Parent=gene-PUW34_12935;Dbxref=NCBI_GP:WJG95498.1;Name=WJG95498.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=PUW34_12935;product=exodeoxyribonuclease VII large subunit;protein_id=WJG95498.1;transl_table=11 CP118122.1 Genbank pseudogene 2618992 2625088 . - . ID=gene-PUW34_12940;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=pseudogene;locus_tag=PUW34_12940;pseudo=true CP118122.1 Protein Homology CDS 2618992 2625088 . - 0 ID=cds-PUW34_12940;Parent=gene-PUW34_12940;Note=frameshifted;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=PUW34_12940;product=fibronectin-binding autotransporter adhesin ShdA;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2625648 2625734 . - . ID=gene-PUW34_12945;Name=PUW34_12945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_12945;pseudo=true CP118122.1 Protein Homology CDS 2625648 2625734 . - 0 ID=cds-PUW34_12945;Parent=gene-PUW34_12945;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=PUW34_12945;product=IS1 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2625749 2633051 . - . ID=gene-PUW34_12950;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=pseudogene;locus_tag=PUW34_12950;pseudo=true CP118122.1 Protein Homology CDS 2625749 2633051 . - 0 ID=cds-PUW34_12950;Parent=gene-PUW34_12950;Note=frameshifted;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=PUW34_12950;product=DUF823/DUF824 repeat adhesin RatB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2633217 2638814 . - . ID=gene-PUW34_12955;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=PUW34_12955 CP118122.1 Protein Homology CDS 2633217 2638814 . - 0 ID=cds-WJG95499.1;Parent=gene-PUW34_12955;Dbxref=NCBI_GP:WJG95499.1;Name=WJG95499.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=PUW34_12955;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WJG95499.1;transl_table=11 CP118122.1 Genbank gene 2638932 2639891 . - . ID=gene-PUW34_12960;Name=PUW34_12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12960 CP118122.1 Protein Homology CDS 2638932 2639891 . - 0 ID=cds-WJG95500.1;Parent=gene-PUW34_12960;Dbxref=NCBI_GP:WJG95500.1;Name=WJG95500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=PUW34_12960;product=SinI family autotransporter-associated protein;protein_id=WJG95500.1;transl_table=11 CP118122.1 Genbank pseudogene 2639949 2642141 . - . ID=gene-PUW34_12965;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=pseudogene;locus_tag=PUW34_12965;pseudo=true CP118122.1 Protein Homology CDS 2639949 2642141 . - 0 ID=cds-PUW34_12965;Parent=gene-PUW34_12965;Note=frameshifted;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=PUW34_12965;product=intimin-like inverse autotransporter SinH;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2642487 2642708 . - . ID=gene-PUW34_12970;Name=PUW34_12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12970 CP118122.1 Protein Homology CDS 2642487 2642708 . - 0 ID=cds-WJG95501.1;Parent=gene-PUW34_12970;Dbxref=NCBI_GP:WJG95501.1;Name=WJG95501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=PUW34_12970;product=zinc ribbon domain-containing protein;protein_id=WJG95501.1;transl_table=11 CP118122.1 Genbank gene 2642797 2644269 . - . ID=gene-PUW34_12975;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=PUW34_12975 CP118122.1 Protein Homology CDS 2642797 2644269 . - 0 ID=cds-WJG95502.1;Parent=gene-PUW34_12975;Dbxref=NCBI_GP:WJG95502.1;Name=WJG95502.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=PUW34_12975;product=ribosome biogenesis GTPase Der;protein_id=WJG95502.1;transl_table=11 CP118122.1 Genbank gene 2644388 2645566 . - . ID=gene-PUW34_12980;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=PUW34_12980 CP118122.1 Protein Homology CDS 2644388 2645566 . - 0 ID=cds-WJG95503.1;Parent=gene-PUW34_12980;Dbxref=NCBI_GP:WJG95503.1;Name=WJG95503.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=PUW34_12980;product=outer membrane protein assembly factor BamB;protein_id=WJG95503.1;transl_table=11 CP118122.1 Genbank gene 2645577 2646197 . - . ID=gene-PUW34_12985;Name=PUW34_12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_12985 CP118122.1 Protein Homology CDS 2645577 2646197 . - 0 ID=cds-WJG95504.1;Parent=gene-PUW34_12985;Dbxref=NCBI_GP:WJG95504.1;Name=WJG95504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=PUW34_12985;product=YfgM family protein;protein_id=WJG95504.1;transl_table=11 CP118122.1 Genbank gene 2646211 2647485 . - . ID=gene-PUW34_12990;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=PUW34_12990 CP118122.1 Protein Homology CDS 2646211 2647485 . - 0 ID=cds-WJG95505.1;Parent=gene-PUW34_12990;Dbxref=NCBI_GP:WJG95505.1;Name=WJG95505.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=PUW34_12990;product=histidine--tRNA ligase;protein_id=WJG95505.1;transl_table=11 CP118122.1 Genbank gene 2647596 2648714 . - . ID=gene-PUW34_12995;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=PUW34_12995 CP118122.1 Protein Homology CDS 2647596 2648714 . - 0 ID=cds-WJG95506.1;Parent=gene-PUW34_12995;Dbxref=NCBI_GP:WJG95506.1;Name=WJG95506.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=PUW34_12995;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WJG95506.1;transl_table=11 CP118122.1 Genbank gene 2648741 2649745 . - . ID=gene-PUW34_13000;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=PUW34_13000 CP118122.1 Protein Homology CDS 2648741 2649745 . - 0 ID=cds-WJG95507.1;Parent=gene-PUW34_13000;Dbxref=NCBI_GP:WJG95507.1;Name=WJG95507.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=PUW34_13000;product=cytoskeleton protein RodZ;protein_id=WJG95507.1;transl_table=11 CP118122.1 Genbank pseudogene 2650037 2651202 . - . ID=gene-PUW34_13005;Name=PUW34_13005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13005;pseudo=true CP118122.1 Protein Homology CDS 2650037 2651202 . - 0 ID=cds-PUW34_13005;Parent=gene-PUW34_13005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=PUW34_13005;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2651409 2651840 . - . ID=gene-PUW34_13010;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=PUW34_13010 CP118122.1 Protein Homology CDS 2651409 2651840 . - 0 ID=cds-WJG95508.1;Parent=gene-PUW34_13010;Dbxref=NCBI_GP:WJG95508.1;Name=WJG95508.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=PUW34_13010;product=nucleoside-diphosphate kinase;protein_id=WJG95508.1;transl_table=11 CP118122.1 Genbank gene 2651961 2652824 . - . ID=gene-PUW34_13015;Name=PUW34_13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13015 CP118122.1 Protein Homology CDS 2651961 2652824 . - 0 ID=cds-WJG95509.1;Parent=gene-PUW34_13015;Dbxref=NCBI_GP:WJG95509.1;Name=WJG95509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=PUW34_13015;product=4Fe-4S binding protein;protein_id=WJG95509.1;transl_table=11 CP118122.1 Genbank gene 2652824 2653633 . - . ID=gene-PUW34_13020;Name=PUW34_13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13020 CP118122.1 Protein Homology CDS 2652824 2653633 . - 0 ID=cds-WJG95510.1;Parent=gene-PUW34_13020;Dbxref=NCBI_GP:WJG95510.1;Name=WJG95510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=PUW34_13020;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WJG95510.1;transl_table=11 CP118122.1 Genbank pseudogene 2653626 2654254 . - . ID=gene-PUW34_13025;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=PUW34_13025;pseudo=true CP118122.1 Protein Homology CDS 2653626 2654254 . - 0 ID=cds-PUW34_13025;Parent=gene-PUW34_13025;Note=frameshifted;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=PUW34_13025;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2654251 2656655 . - . ID=gene-PUW34_13030;Name=PUW34_13030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13030;pseudo=true CP118122.1 Protein Homology CDS 2654251 2656655 . - 0 ID=cds-PUW34_13030;Parent=gene-PUW34_13030;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=PUW34_13030;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2656784 2659099 . - . ID=gene-PUW34_13035;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=PUW34_13035 CP118122.1 Protein Homology CDS 2656784 2659099 . - 0 ID=cds-WJG95511.1;Parent=gene-PUW34_13035;Dbxref=NCBI_GP:WJG95511.1;Name=WJG95511.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=PUW34_13035;product=peptidoglycan glycosyltransferase PbpC;protein_id=WJG95511.1;transl_table=11 CP118122.1 Genbank gene 2659100 2664034 . - . ID=gene-PUW34_13040;Name=PUW34_13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13040 CP118122.1 Protein Homology CDS 2659100 2664034 . - 0 ID=cds-WJG95512.1;Parent=gene-PUW34_13040;Dbxref=NCBI_GP:WJG95512.1;Name=WJG95512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=PUW34_13040;product=alpha-2-macroglobulin;protein_id=WJG95512.1;transl_table=11 CP118122.1 Genbank gene 2664243 2665085 . + . ID=gene-PUW34_13045;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PUW34_13045 CP118122.1 Protein Homology CDS 2664243 2665085 . + 0 ID=cds-WJG95513.1;Parent=gene-PUW34_13045;Dbxref=NCBI_GP:WJG95513.1;Name=WJG95513.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=PUW34_13045;product=3-mercaptopyruvate sulfurtransferase;protein_id=WJG95513.1;transl_table=11 CP118122.1 Genbank gene 2665065 2665289 . - . ID=gene-PUW34_13050;Name=PUW34_13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13050 CP118122.1 Protein Homology CDS 2665065 2665289 . - 0 ID=cds-WJG95514.1;Parent=gene-PUW34_13050;Dbxref=NCBI_GP:WJG95514.1;Name=WJG95514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=PUW34_13050;product=hypothetical protein;protein_id=WJG95514.1;transl_table=11 CP118122.1 Genbank gene 2665331 2665999 . + . ID=gene-PUW34_13055;Name=PUW34_13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13055 CP118122.1 Protein Homology CDS 2665331 2665999 . + 0 ID=cds-WJG95515.1;Parent=gene-PUW34_13055;Dbxref=NCBI_GP:WJG95515.1;Name=WJG95515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=PUW34_13055;product=DUF5066 family protein;protein_id=WJG95515.1;transl_table=11 CP118122.1 Genbank gene 2666415 2666531 . + . ID=gene-PUW34_13060;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=PUW34_13060 CP118122.1 Protein Homology CDS 2666415 2666531 . + 0 ID=cds-WJG95516.1;Parent=gene-PUW34_13060;Dbxref=NCBI_GP:WJG95516.1;Name=WJG95516.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=PUW34_13060;product=small toxic inner membrane protein TimP;protein_id=WJG95516.1;transl_table=11 CP118122.1 Genbank gene 2666568 2667344 . - . ID=gene-PUW34_13065;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=PUW34_13065 CP118122.1 Protein Homology CDS 2666568 2667344 . - 0 ID=cds-WJG95517.1;Parent=gene-PUW34_13065;Dbxref=NCBI_GP:WJG95517.1;Name=WJG95517.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=PUW34_13065;product=enhanced serine sensitivity protein SseB;protein_id=WJG95517.1;transl_table=11 CP118122.1 Genbank gene 2667454 2668737 . - . ID=gene-PUW34_13070;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=PUW34_13070 CP118122.1 Protein Homology CDS 2667454 2668737 . - 0 ID=cds-WJG95518.1;Parent=gene-PUW34_13070;Dbxref=NCBI_GP:WJG95518.1;Name=WJG95518.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=PUW34_13070;product=aminopeptidase PepB;protein_id=WJG95518.1;transl_table=11 CP118122.1 Genbank gene 2668915 2669115 . - . ID=gene-PUW34_13075;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=PUW34_13075 CP118122.1 Protein Homology CDS 2668915 2669115 . - 0 ID=cds-WJG95519.1;Parent=gene-PUW34_13075;Dbxref=NCBI_GP:WJG95519.1;Name=WJG95519.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=PUW34_13075;product=Fe-S cluster assembly protein IscX;protein_id=WJG95519.1;transl_table=11 CP118122.1 Genbank gene 2669127 2669462 . - . ID=gene-PUW34_13080;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=PUW34_13080 CP118122.1 Protein Homology CDS 2669127 2669462 . - 0 ID=cds-WJG95520.1;Parent=gene-PUW34_13080;Dbxref=NCBI_GP:WJG95520.1;Name=WJG95520.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=PUW34_13080;product=ISC system 2Fe-2S type ferredoxin;protein_id=WJG95520.1;transl_table=11 CP118122.1 Genbank gene 2669464 2671314 . - . ID=gene-PUW34_13085;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=PUW34_13085 CP118122.1 Protein Homology CDS 2669464 2671314 . - 0 ID=cds-WJG95521.1;Parent=gene-PUW34_13085;Dbxref=NCBI_GP:WJG95521.1;Name=WJG95521.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=PUW34_13085;product=Fe-S protein assembly chaperone HscA;protein_id=WJG95521.1;transl_table=11 CP118122.1 Genbank gene 2671327 2671842 . - . ID=gene-PUW34_13090;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=PUW34_13090 CP118122.1 Protein Homology CDS 2671327 2671842 . - 0 ID=cds-WJG95522.1;Parent=gene-PUW34_13090;Dbxref=NCBI_GP:WJG95522.1;Name=WJG95522.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=PUW34_13090;product=co-chaperone HscB;protein_id=WJG95522.1;transl_table=11 CP118122.1 Genbank gene 2672038 2672361 . - . ID=gene-PUW34_13095;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=PUW34_13095 CP118122.1 Protein Homology CDS 2672038 2672361 . - 0 ID=cds-WJG95523.1;Parent=gene-PUW34_13095;Dbxref=NCBI_GP:WJG95523.1;Name=WJG95523.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=PUW34_13095;product=iron-sulfur cluster assembly protein IscA;protein_id=WJG95523.1;transl_table=11 CP118122.1 Genbank pseudogene 2672390 2672775 . - . ID=gene-PUW34_13100;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=pseudogene;locus_tag=PUW34_13100;pseudo=true CP118122.1 Protein Homology CDS 2672390 2672775 . - 0 ID=cds-PUW34_13100;Parent=gene-PUW34_13100;Note=frameshifted;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=PUW34_13100;product=Fe-S cluster assembly scaffold IscU;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2672803 2674016 . - . ID=gene-PUW34_13105;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=pseudogene;locus_tag=PUW34_13105;pseudo=true CP118122.1 Protein Homology CDS 2672803 2674016 . - 0 ID=cds-PUW34_13105;Parent=gene-PUW34_13105;Note=frameshifted;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=PUW34_13105;product=cysteine desulfurase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2674197 2674691 . - . ID=gene-PUW34_13110;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=PUW34_13110 CP118122.1 Protein Homology CDS 2674197 2674691 . - 0 ID=cds-WJG95524.1;Parent=gene-PUW34_13110;Dbxref=NCBI_GP:WJG95524.1;Name=WJG95524.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=PUW34_13110;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WJG95524.1;transl_table=11 CP118122.1 Genbank gene 2674851 2675582 . - . ID=gene-PUW34_13115;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=PUW34_13115 CP118122.1 Protein Homology CDS 2674851 2675582 . - 0 ID=cds-WJG95525.1;Parent=gene-PUW34_13115;Dbxref=NCBI_GP:WJG95525.1;Name=WJG95525.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=PUW34_13115;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WJG95525.1;transl_table=11 CP118122.1 Genbank gene 2675701 2676504 . + . ID=gene-PUW34_13120;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=PUW34_13120 CP118122.1 Protein Homology CDS 2675701 2676504 . + 0 ID=cds-WJG95526.1;Parent=gene-PUW34_13120;Dbxref=NCBI_GP:WJG95526.1;Name=WJG95526.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=PUW34_13120;product=inositol-1-monophosphatase;protein_id=WJG95526.1;transl_table=11 CP118122.1 Genbank gene 2676649 2677527 . + . ID=gene-PUW34_13125;Name=PUW34_13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13125 CP118122.1 Protein Homology CDS 2676649 2677527 . + 0 ID=cds-WJG95527.1;Parent=gene-PUW34_13125;Dbxref=NCBI_GP:WJG95527.1;Name=WJG95527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=PUW34_13125;product=alpha/beta hydrolase;protein_id=WJG95527.1;transl_table=11 CP118122.1 Genbank pseudogene 2677709 2678753 . + . ID=gene-PUW34_13130;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=pseudogene;locus_tag=PUW34_13130;pseudo=true CP118122.1 Protein Homology CDS 2677709 2678753 . + 0 ID=cds-PUW34_13130;Parent=gene-PUW34_13130;Note=frameshifted;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=PUW34_13130;product=anaerobic sulfite reductase subunit AsrA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2678757 2679575 . + . ID=gene-PUW34_13135;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=PUW34_13135 CP118122.1 Protein Homology CDS 2678757 2679575 . + 0 ID=cds-WJG95528.1;Parent=gene-PUW34_13135;Dbxref=NCBI_GP:WJG95528.1;Name=WJG95528.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=PUW34_13135;product=anaerobic sulfite reductase subunit AsrB;protein_id=WJG95528.1;transl_table=11 CP118122.1 Genbank gene 2679586 2680599 . + . ID=gene-PUW34_13140;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=PUW34_13140 CP118122.1 Protein Homology CDS 2679586 2680599 . + 0 ID=cds-WJG95529.1;Parent=gene-PUW34_13140;Dbxref=NCBI_GP:WJG95529.1;Name=WJG95529.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=PUW34_13140;product=sulfite reductase subunit C;protein_id=WJG95529.1;transl_table=11 CP118122.1 Genbank pseudogene 2680600 2681585 . - . ID=gene-PUW34_13145;Name=PUW34_13145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13145;pseudo=true CP118122.1 Protein Homology CDS 2680600 2681585 . - 0 ID=cds-PUW34_13145;Parent=gene-PUW34_13145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=PUW34_13145;product=nickel/cobalt transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2681576 2682214 . - . ID=gene-PUW34_13150;Name=PUW34_13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13150 CP118122.1 Protein Homology CDS 2681576 2682214 . - 0 ID=cds-WJG98996.1;Parent=gene-PUW34_13150;Dbxref=NCBI_GP:WJG98996.1;Name=WJG98996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=PUW34_13150;product=DUF1007 family protein;protein_id=WJG98996.1;transl_table=11 CP118122.1 Genbank gene 2682340 2683617 . + . ID=gene-PUW34_13155;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=PUW34_13155 CP118122.1 Protein Homology CDS 2682340 2683617 . + 0 ID=cds-WJG95530.1;Parent=gene-PUW34_13155;Dbxref=NCBI_GP:WJG95530.1;Name=WJG95530.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=PUW34_13155;product=stationary phase inducible protein CsiE;protein_id=WJG95530.1;transl_table=11 CP118122.1 Genbank gene 2683612 2684751 . - . ID=gene-PUW34_13160;Name=PUW34_13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13160 CP118122.1 Protein Homology CDS 2683612 2684751 . - 0 ID=cds-WJG95531.1;Parent=gene-PUW34_13160;Dbxref=NCBI_GP:WJG95531.1;Name=WJG95531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=PUW34_13160;product=3-phenylpropionate MFS transporter;protein_id=WJG95531.1;transl_table=11 CP118122.1 Genbank gene 2684947 2686200 . - . ID=gene-PUW34_13165;Name=PUW34_13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13165 CP118122.1 Protein Homology CDS 2684947 2686200 . - 0 ID=cds-WJG95532.1;Parent=gene-PUW34_13165;Dbxref=NCBI_GP:WJG95532.1;Name=WJG95532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=PUW34_13165;product=serine hydroxymethyltransferase;protein_id=WJG95532.1;transl_table=11 CP118122.1 Genbank gene 2686525 2687715 . + . ID=gene-PUW34_13170;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=PUW34_13170 CP118122.1 Protein Homology CDS 2686525 2687715 . + 0 ID=cds-WJG95533.1;Parent=gene-PUW34_13170;Dbxref=NCBI_GP:WJG95533.1;Name=WJG95533.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=PUW34_13170;product=NO-inducible flavohemoprotein;protein_id=WJG95533.1;transl_table=11 CP118122.1 Genbank gene 2687897 2689438 . + . ID=gene-PUW34_13175;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=PUW34_13175 CP118122.1 Protein Homology CDS 2687897 2689438 . + 0 ID=cds-WJG95534.1;Parent=gene-PUW34_13175;Dbxref=NCBI_GP:WJG95534.1;Name=WJG95534.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=PUW34_13175;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WJG95534.1;transl_table=11 CP118122.1 Genbank gene 2689799 2691130 . + . ID=gene-PUW34_13180;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=PUW34_13180 CP118122.1 Protein Homology CDS 2689799 2691130 . + 0 ID=cds-WJG95535.1;Parent=gene-PUW34_13180;Dbxref=NCBI_GP:WJG95535.1;Name=WJG95535.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=PUW34_13180;product=cadaverine/lysine antiporter;protein_id=WJG95535.1;transl_table=11 CP118122.1 Genbank gene 2691213 2693357 . + . ID=gene-PUW34_13185;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=PUW34_13185 CP118122.1 Protein Homology CDS 2691213 2693357 . + 0 ID=cds-WJG95536.1;Parent=gene-PUW34_13185;Dbxref=NCBI_GP:WJG95536.1;Name=WJG95536.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=PUW34_13185;product=lysine decarboxylase CadA;protein_id=WJG95536.1;transl_table=11 CP118122.1 Genbank pseudogene 2693413 2694872 . + . ID=gene-PUW34_13190;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=pseudogene;locus_tag=PUW34_13190;pseudo=true CP118122.1 Protein Homology CDS 2693413 2694872 . + 0 ID=cds-PUW34_13190;Parent=gene-PUW34_13190;Note=frameshifted;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=PUW34_13190;product=dipeptide permease DtpD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2694921 2695259 . - . ID=gene-PUW34_13195;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=PUW34_13195 CP118122.1 Protein Homology CDS 2694921 2695259 . - 0 ID=cds-WJG95537.1;Parent=gene-PUW34_13195;Dbxref=NCBI_GP:WJG95537.1;Name=WJG95537.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=PUW34_13195;product=nitrogen regulatory protein P-II;protein_id=WJG95537.1;transl_table=11 CP118122.1 Genbank gene 2695336 2696673 . - . ID=gene-PUW34_13200;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=PUW34_13200 CP118122.1 Protein Homology CDS 2695336 2696673 . - 0 ID=cds-WJG95538.1;Parent=gene-PUW34_13200;Dbxref=NCBI_GP:WJG95538.1;Name=WJG95538.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=PUW34_13200;product=two-component system response regulator GlrR;protein_id=WJG95538.1;transl_table=11 CP118122.1 Genbank gene 2696670 2697434 . - . ID=gene-PUW34_13205;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=PUW34_13205 CP118122.1 Protein Homology CDS 2696670 2697434 . - 0 ID=cds-WJG95539.1;Parent=gene-PUW34_13205;Dbxref=NCBI_GP:WJG95539.1;Name=WJG95539.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=PUW34_13205;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WJG95539.1;transl_table=11 CP118122.1 Genbank gene 2697436 2698866 . - . ID=gene-PUW34_13210;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=PUW34_13210 CP118122.1 Protein Homology CDS 2697436 2698866 . - 0 ID=cds-WJG95540.1;Parent=gene-PUW34_13210;Dbxref=NCBI_GP:WJG95540.1;Name=WJG95540.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=PUW34_13210;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WJG95540.1;transl_table=11 CP118122.1 Genbank gene 2699516 2703403 . - . ID=gene-PUW34_13215;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=PUW34_13215 CP118122.1 Protein Homology CDS 2699516 2703403 . - 0 ID=cds-WJG95541.1;Parent=gene-PUW34_13215;Dbxref=NCBI_GP:WJG95541.1;Name=WJG95541.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=PUW34_13215;product=phosphoribosylformylglycinamidine synthase;protein_id=WJG95541.1;transl_table=11 CP118122.1 Genbank gene 2703425 2703658 . + . ID=gene-PUW34_13220;Name=PUW34_13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13220 CP118122.1 Protein Homology CDS 2703425 2703658 . + 0 ID=cds-WJG95542.1;Parent=gene-PUW34_13220;Dbxref=NCBI_GP:WJG95542.1;Name=WJG95542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=PUW34_13220;product=hypothetical protein;protein_id=WJG95542.1;transl_table=11 CP118122.1 Genbank gene 2703659 2705203 . + . ID=gene-PUW34_13225;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=PUW34_13225 CP118122.1 Protein Homology CDS 2703659 2705203 . + 0 ID=cds-WJG95543.1;Parent=gene-PUW34_13225;Dbxref=NCBI_GP:WJG95543.1;Name=WJG95543.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=PUW34_13225;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WJG95543.1;transl_table=11 CP118122.1 Genbank gene 2705254 2705805 . - . ID=gene-PUW34_13230;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=PUW34_13230 CP118122.1 Protein Homology CDS 2705254 2705805 . - 0 ID=cds-WJG95544.1;Parent=gene-PUW34_13230;Dbxref=NCBI_GP:WJG95544.1;Name=WJG95544.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=PUW34_13230;product=tRNA adenosine(34) deaminase TadA;protein_id=WJG95544.1;transl_table=11 CP118122.1 Genbank gene 2705830 2706465 . - . ID=gene-PUW34_13235;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=PUW34_13235 CP118122.1 Protein Homology CDS 2705830 2706465 . - 0 ID=cds-WJG95545.1;Parent=gene-PUW34_13235;Dbxref=NCBI_GP:WJG95545.1;Name=WJG95545.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=PUW34_13235;product=phosphatidylglycerophosphatase C;protein_id=WJG95545.1;transl_table=11 CP118122.1 Genbank gene 2706469 2707830 . - . ID=gene-PUW34_13240;Name=PUW34_13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13240 CP118122.1 Protein Homology CDS 2706469 2707830 . - 0 ID=cds-WJG95546.1;Parent=gene-PUW34_13240;Dbxref=NCBI_GP:WJG95546.1;Name=WJG95546.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=PUW34_13240;product=PTS transporter subunit EIIC;protein_id=WJG95546.1;transl_table=11 CP118122.1 Genbank gene 2707841 2708734 . - . ID=gene-PUW34_13245;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=PUW34_13245 CP118122.1 Protein Homology CDS 2707841 2708734 . - 0 ID=cds-WJG95547.1;Parent=gene-PUW34_13245;Dbxref=NCBI_GP:WJG95547.1;Name=WJG95547.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=PUW34_13245;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WJG95547.1;transl_table=11 CP118122.1 Genbank gene 2708850 2709698 . + . ID=gene-PUW34_13250;Name=PUW34_13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13250 CP118122.1 Protein Homology CDS 2708850 2709698 . + 0 ID=cds-WJG95548.1;Parent=gene-PUW34_13250;Dbxref=NCBI_GP:WJG95548.1;Name=WJG95548.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=PUW34_13250;product=MurR/RpiR family transcriptional regulator;protein_id=WJG95548.1;transl_table=11 CP118122.1 Genbank pseudogene 2709737 2710652 . - . ID=gene-PUW34_13255;Name=PUW34_13255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13255;pseudo=true CP118122.1 Protein Homology CDS 2709737 2710652 . - 0 ID=cds-PUW34_13255;Parent=gene-PUW34_13255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=PUW34_13255;product=oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2710674 2711870 . - . ID=gene-PUW34_13260;Name=PUW34_13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13260 CP118122.1 Protein Homology CDS 2710674 2711870 . - 0 ID=cds-WJG95549.1;Parent=gene-PUW34_13260;Dbxref=NCBI_GP:WJG95549.1;Name=WJG95549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=PUW34_13260;product=OFA family MFS transporter;protein_id=WJG95549.1;transl_table=11 CP118122.1 Genbank gene 2711986 2712912 . + . ID=gene-PUW34_13265;Name=PUW34_13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13265 CP118122.1 Protein Homology CDS 2711986 2712912 . + 0 ID=cds-WJG95550.1;Parent=gene-PUW34_13265;Dbxref=NCBI_GP:WJG95550.1;Name=WJG95550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=PUW34_13265;product=LysR family transcriptional regulator;protein_id=WJG95550.1;transl_table=11 CP118122.1 Genbank gene 2712950 2713210 . + . ID=gene-PUW34_13270;Name=PUW34_13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13270 CP118122.1 Protein Homology CDS 2712950 2713210 . + 0 ID=cds-WJG95551.1;Parent=gene-PUW34_13270;Dbxref=NCBI_GP:WJG95551.1;Name=WJG95551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=PUW34_13270;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WJG95551.1;transl_table=11 CP118122.1 Genbank gene 2713322 2713702 . - . ID=gene-PUW34_13275;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=PUW34_13275 CP118122.1 Protein Homology CDS 2713322 2713702 . - 0 ID=cds-WJG95552.1;Parent=gene-PUW34_13275;Dbxref=NCBI_GP:WJG95552.1;Name=WJG95552.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=PUW34_13275;product=holo-ACP synthase;protein_id=WJG95552.1;transl_table=11 CP118122.1 Genbank gene 2713702 2714433 . - . ID=gene-PUW34_13280;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=PUW34_13280 CP118122.1 Protein Homology CDS 2713702 2714433 . - 0 ID=cds-WJG95553.1;Parent=gene-PUW34_13280;Dbxref=NCBI_GP:WJG95553.1;Name=WJG95553.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=PUW34_13280;product=pyridoxine 5'-phosphate synthase;protein_id=WJG95553.1;transl_table=11 CP118122.1 Genbank gene 2714445 2715173 . - . ID=gene-PUW34_13285;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=PUW34_13285 CP118122.1 Protein Homology CDS 2714445 2715173 . - 0 ID=cds-WJG95554.1;Parent=gene-PUW34_13285;Dbxref=NCBI_GP:WJG95554.1;Name=WJG95554.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=PUW34_13285;product=DNA repair protein RecO;protein_id=WJG95554.1;transl_table=11 CP118122.1 Genbank pseudogene 2715185 2716089 . - . ID=gene-PUW34_13290;Name=era;gbkey=Gene;gene=era;gene_biotype=pseudogene;locus_tag=PUW34_13290;pseudo=true CP118122.1 Protein Homology CDS 2715185 2716089 . - 0 ID=cds-PUW34_13290;Parent=gene-PUW34_13290;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=PUW34_13290;product=GTPase Era;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2716086 2716766 . - . ID=gene-PUW34_13295;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=PUW34_13295 CP118122.1 Protein Homology CDS 2716086 2716766 . - 0 ID=cds-WJG95555.1;Parent=gene-PUW34_13295;Dbxref=NCBI_GP:WJG95555.1;Name=WJG95555.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=PUW34_13295;product=ribonuclease III;protein_id=WJG95555.1;transl_table=11 CP118122.1 Genbank gene 2717040 2718014 . - . ID=gene-PUW34_13300;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PUW34_13300 CP118122.1 Protein Homology CDS 2717040 2718014 . - 0 ID=cds-WJG95556.1;Parent=gene-PUW34_13300;Dbxref=NCBI_GP:WJG95556.1;Name=WJG95556.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=PUW34_13300;product=signal peptidase I;protein_id=WJG95556.1;transl_table=11 CP118122.1 Genbank gene 2718031 2719830 . - . ID=gene-PUW34_13305;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=PUW34_13305 CP118122.1 Protein Homology CDS 2718031 2719830 . - 0 ID=cds-WJG95557.1;Parent=gene-PUW34_13305;Dbxref=NCBI_GP:WJG95557.1;Name=WJG95557.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=PUW34_13305;product=translation elongation factor 4;protein_id=WJG95557.1;transl_table=11 CP118122.1 Genbank gene 2720081 2720560 . - . ID=gene-PUW34_13310;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=PUW34_13310 CP118122.1 Protein Homology CDS 2720081 2720560 . - 0 ID=cds-WJG95558.1;Parent=gene-PUW34_13310;Dbxref=NCBI_GP:WJG95558.1;Name=WJG95558.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=PUW34_13310;product=SoxR-reducing system protein RseC;protein_id=WJG95558.1;transl_table=11 CP118122.1 Genbank gene 2720557 2721513 . - . ID=gene-PUW34_13315;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=PUW34_13315 CP118122.1 Protein Homology CDS 2720557 2721513 . - 0 ID=cds-WJG95559.1;Parent=gene-PUW34_13315;Dbxref=NCBI_GP:WJG95559.1;Name=WJG95559.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=PUW34_13315;product=sigma-E factor regulatory protein RseB;protein_id=WJG95559.1;transl_table=11 CP118122.1 Genbank gene 2721513 2722163 . - . ID=gene-PUW34_13320;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=PUW34_13320 CP118122.1 Protein Homology CDS 2721513 2722163 . - 0 ID=cds-WJG95560.1;Parent=gene-PUW34_13320;Dbxref=NCBI_GP:WJG95560.1;Name=WJG95560.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=PUW34_13320;product=anti-sigma-E factor RseA;protein_id=WJG95560.1;transl_table=11 CP118122.1 Genbank gene 2722195 2722770 . - . ID=gene-PUW34_13325;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=PUW34_13325 CP118122.1 Protein Homology CDS 2722195 2722770 . - 0 ID=cds-WJG95561.1;Parent=gene-PUW34_13325;Dbxref=NCBI_GP:WJG95561.1;Name=WJG95561.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=PUW34_13325;product=RNA polymerase sigma factor RpoE;protein_id=WJG95561.1;transl_table=11 CP118122.1 Genbank gene 2722767 2722931 . - . ID=gene-PUW34_13330;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=PUW34_13330 CP118122.1 Protein Homology CDS 2722767 2722931 . - 0 ID=cds-WJG95562.1;Parent=gene-PUW34_13330;Dbxref=NCBI_GP:WJG95562.1;Name=WJG95562.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=PUW34_13330;product=rpoE leader peptide RseD;protein_id=WJG95562.1;transl_table=11 CP118122.1 Genbank gene 2723195 2724817 . + . ID=gene-PUW34_13335;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=PUW34_13335 CP118122.1 Protein Homology CDS 2723195 2724817 . + 0 ID=cds-WJG95563.1;Parent=gene-PUW34_13335;Dbxref=NCBI_GP:WJG95563.1;Name=WJG95563.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=PUW34_13335;product=L-aspartate oxidase;protein_id=WJG95563.1;transl_table=11 CP118122.1 Genbank gene 2724802 2725539 . - . ID=gene-PUW34_13340;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=PUW34_13340 CP118122.1 Protein Homology CDS 2724802 2725539 . - 0 ID=cds-WJG95564.1;Parent=gene-PUW34_13340;Dbxref=NCBI_GP:WJG95564.1;Name=WJG95564.1;gbkey=CDS;gene=trmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=PUW34_13340;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WJG95564.1;transl_table=11 CP118122.1 Genbank gene 2725669 2727003 . + . ID=gene-PUW34_13345;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=PUW34_13345 CP118122.1 Protein Homology CDS 2725669 2727003 . + 0 ID=cds-WJG95565.1;Parent=gene-PUW34_13345;Dbxref=NCBI_GP:WJG95565.1;Name=WJG95565.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=PUW34_13345;product=ATP-dependent RNA helicase SrmB;protein_id=WJG95565.1;transl_table=11 CP118122.1 Genbank gene 2727021 2727920 . - . ID=gene-PUW34_13350;Name=PUW34_13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13350 CP118122.1 Protein Homology CDS 2727021 2727920 . - 0 ID=cds-WJG95566.1;Parent=gene-PUW34_13350;Dbxref=NCBI_GP:WJG95566.1;Name=WJG95566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=PUW34_13350;product=LysR family transcriptional regulator;protein_id=WJG95566.1;transl_table=11 CP118122.1 Genbank gene 2728023 2728610 . + . ID=gene-PUW34_13355;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=PUW34_13355 CP118122.1 Protein Homology CDS 2728023 2728610 . + 0 ID=cds-WJG95567.1;Parent=gene-PUW34_13355;Dbxref=NCBI_GP:WJG95567.1;Name=WJG95567.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=PUW34_13355;product=cysteine/O-acetylserine transporter;protein_id=WJG95567.1;transl_table=11 CP118122.1 Genbank gene 2728672 2729055 . - . ID=gene-PUW34_13360;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=PUW34_13360 CP118122.1 Protein Homology CDS 2728672 2729055 . - 0 ID=cds-WJG95568.1;Parent=gene-PUW34_13360;Dbxref=NCBI_GP:WJG95568.1;Name=WJG95568.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=PUW34_13360;product=autonomous glycyl radical cofactor GrcA;protein_id=WJG95568.1;transl_table=11 CP118122.1 Genbank gene 2729374 2730063 . + . ID=gene-PUW34_13365;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=PUW34_13365 CP118122.1 Protein Homology CDS 2729374 2730063 . + 0 ID=cds-WJG95569.1;Parent=gene-PUW34_13365;Dbxref=NCBI_GP:WJG95569.1;Name=WJG95569.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=PUW34_13365;product=uracil-DNA glycosylase;protein_id=WJG95569.1;transl_table=11 CP118122.1 Genbank gene 2730179 2731216 . - . ID=gene-PUW34_13370;Name=PUW34_13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13370 CP118122.1 Protein Homology CDS 2730179 2731216 . - 0 ID=cds-WJG95570.1;Parent=gene-PUW34_13370;Dbxref=NCBI_GP:WJG95570.1;Name=WJG95570.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=PUW34_13370;product=tRNA/rRNA methyltransferase;protein_id=WJG95570.1;transl_table=11 CP118122.1 Genbank gene 2731420 2731839 . + . ID=gene-PUW34_13375;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=PUW34_13375 CP118122.1 Protein Homology CDS 2731420 2731839 . + 0 ID=cds-WJG95571.1;Parent=gene-PUW34_13375;Dbxref=NCBI_GP:WJG95571.1;Name=WJG95571.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=PUW34_13375;product=thioredoxin TrxC;protein_id=WJG95571.1;transl_table=11 CP118122.1 Genbank gene 2731912 2732592 . + . ID=gene-PUW34_13380;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=PUW34_13380 CP118122.1 Protein Homology CDS 2731912 2732592 . + 0 ID=cds-WJG95572.1;Parent=gene-PUW34_13380;Dbxref=NCBI_GP:WJG95572.1;Name=WJG95572.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=PUW34_13380;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WJG95572.1;transl_table=11 CP118122.1 Genbank gene 2732646 2735306 . + . ID=gene-PUW34_13385;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=PUW34_13385 CP118122.1 Protein Homology CDS 2732646 2735306 . + 0 ID=cds-WJG95573.1;Parent=gene-PUW34_13385;Dbxref=NCBI_GP:WJG95573.1;Name=WJG95573.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=PUW34_13385;product=protein lysine acetyltransferase;protein_id=WJG95573.1;transl_table=11 CP118122.1 Genbank pseudogene 2735396 2735437 . + . ID=gene-PUW34_13390;Name=PUW34_13390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13390;pseudo=true CP118122.1 Protein Homology CDS 2735396 2735437 . + 0 ID=cds-PUW34_13390;Parent=gene-PUW34_13390;Note=too short;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051192.1;locus_tag=PUW34_13390;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2735421 2736776 . + . ID=gene-PUW34_13395;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=PUW34_13395 CP118122.1 Protein Homology CDS 2735421 2736776 . + 0 ID=cds-WJG98997.1;Parent=gene-PUW34_13395;Dbxref=NCBI_GP:WJG98997.1;Name=WJG98997.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=PUW34_13395;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WJG98997.1;transl_table=11 CP118122.1 Genbank gene 2736821 2737144 . + . ID=gene-PUW34_13400;Name=PUW34_13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13400 CP118122.1 Protein Homology CDS 2736821 2737144 . + 0 ID=cds-WJG95574.1;Parent=gene-PUW34_13400;Dbxref=NCBI_GP:WJG95574.1;Name=WJG95574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=PUW34_13400;product=YfiM family lipoprotein;protein_id=WJG95574.1;transl_table=11 CP118122.1 Genbank gene 2737141 2738442 . - . ID=gene-PUW34_13405;Name=PUW34_13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13405 CP118122.1 Protein Homology CDS 2737141 2738442 . - 0 ID=cds-WJG95575.1;Parent=gene-PUW34_13405;Dbxref=NCBI_GP:WJG95575.1;Name=WJG95575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=PUW34_13405;product=MFS transporter;protein_id=WJG95575.1;transl_table=11 CP118122.1 Genbank gene 2738546 2739001 . - . ID=gene-PUW34_13410;Name=PUW34_13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13410 CP118122.1 Protein Homology CDS 2738546 2739001 . - 0 ID=cds-WJG95576.1;Parent=gene-PUW34_13410;Dbxref=NCBI_GP:WJG95576.1;Name=WJG95576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=PUW34_13410;product=DUF4385 domain-containing protein;protein_id=WJG95576.1;transl_table=11 CP118122.1 Genbank gene 2739193 2739308 . - . ID=gene-PUW34_13415;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW34_13415 CP118122.1 cmsearch rRNA 2739193 2739308 . - . ID=rna-PUW34_13415;Parent=gene-PUW34_13415;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_13415;product=5S ribosomal RNA CP118122.1 cmsearch exon 2739193 2739308 . - . ID=exon-PUW34_13415-1;Parent=rna-PUW34_13415;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_13415;product=5S ribosomal RNA CP118122.1 Genbank gene 2739505 2742493 . - . ID=gene-PUW34_13420;Name=PUW34_13420;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_13420 CP118122.1 cmsearch rRNA 2739505 2742493 . - . ID=rna-PUW34_13420;Parent=gene-PUW34_13420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_13420;product=23S ribosomal RNA CP118122.1 cmsearch exon 2739505 2742493 . - . ID=exon-PUW34_13420-1;Parent=rna-PUW34_13420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_13420;product=23S ribosomal RNA CP118122.1 Genbank gene 2742687 2742762 . - . ID=gene-PUW34_13425;Name=PUW34_13425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_13425 CP118122.1 tRNAscan-SE tRNA 2742687 2742762 . - . ID=rna-PUW34_13425;Parent=gene-PUW34_13425;anticodon=(pos:complement(2742726..2742728));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13425;product=tRNA-Glu CP118122.1 tRNAscan-SE exon 2742687 2742762 . - . ID=exon-PUW34_13425-1;Parent=rna-PUW34_13425;anticodon=(pos:complement(2742726..2742728));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13425;product=tRNA-Glu CP118122.1 Genbank gene 2742848 2744389 . - . ID=gene-PUW34_13430;Name=PUW34_13430;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_13430 CP118122.1 cmsearch rRNA 2742848 2744389 . - . ID=rna-PUW34_13430;Parent=gene-PUW34_13430;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_13430;product=16S ribosomal RNA CP118122.1 cmsearch exon 2742848 2744389 . - . ID=exon-PUW34_13430-1;Parent=rna-PUW34_13430;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_13430;product=16S ribosomal RNA CP118122.1 Genbank gene 2744842 2747415 . - . ID=gene-PUW34_13435;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=PUW34_13435 CP118122.1 Protein Homology CDS 2744842 2747415 . - 0 ID=cds-WJG95577.1;Parent=gene-PUW34_13435;Dbxref=NCBI_GP:WJG95577.1;Name=WJG95577.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=PUW34_13435;product=ATP-dependent chaperone ClpB;protein_id=WJG95577.1;transl_table=11 CP118122.1 Genbank gene 2747545 2748276 . - . ID=gene-PUW34_13440;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=PUW34_13440 CP118122.1 Protein Homology CDS 2747545 2748276 . - 0 ID=cds-WJG95578.1;Parent=gene-PUW34_13440;Dbxref=NCBI_GP:WJG95578.1;Name=WJG95578.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=PUW34_13440;product=purine nucleoside phosphorylase YfiH;protein_id=WJG95578.1;transl_table=11 CP118122.1 Genbank gene 2748273 2749253 . - . ID=gene-PUW34_13445;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=PUW34_13445 CP118122.1 Protein Homology CDS 2748273 2749253 . - 0 ID=cds-WJG95579.1;Parent=gene-PUW34_13445;Dbxref=NCBI_GP:WJG95579.1;Name=WJG95579.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=PUW34_13445;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WJG95579.1;transl_table=11 CP118122.1 Genbank gene 2749385 2750122 . + . ID=gene-PUW34_13450;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=PUW34_13450 CP118122.1 Protein Homology CDS 2749385 2750122 . + 0 ID=cds-WJG95580.1;Parent=gene-PUW34_13450;Dbxref=NCBI_GP:WJG95580.1;Name=WJG95580.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=PUW34_13450;product=outer membrane protein assembly factor BamD;protein_id=WJG95580.1;transl_table=11 CP118122.1 Genbank gene 2750394 2750732 . + . ID=gene-PUW34_13455;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=PUW34_13455 CP118122.1 Protein Homology CDS 2750394 2750732 . + 0 ID=cds-WJG95581.1;Parent=gene-PUW34_13455;Dbxref=NCBI_GP:WJG95581.1;Name=WJG95581.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=PUW34_13455;product=ribosome-associated translation inhibitor RaiA;protein_id=WJG95581.1;transl_table=11 CP118122.1 cmsearch sequence_feature 2750835 2750960 . + . ID=id-CP118122.1:2750835..2750960;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118122.1 Genbank gene 2750836 2750883 . + . ID=gene-PUW34_13460;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=PUW34_13460 CP118122.1 Protein Homology CDS 2750836 2750883 . + 0 ID=cds-WJG98998.1;Parent=gene-PUW34_13460;Dbxref=NCBI_GP:WJG98998.1;Name=WJG98998.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=PUW34_13460;product=pheA operon leader peptide PheL;protein_id=WJG98998.1;transl_table=11 CP118122.1 Genbank gene 2750983 2752143 . + . ID=gene-PUW34_13465;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=PUW34_13465 CP118122.1 Protein Homology CDS 2750983 2752143 . + 0 ID=cds-WJG95582.1;Parent=gene-PUW34_13465;Dbxref=NCBI_GP:WJG95582.1;Name=WJG95582.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=PUW34_13465;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WJG95582.1;transl_table=11 CP118122.1 Genbank gene 2752104 2753012 . - . ID=gene-PUW34_13470;Name=PUW34_13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13470 CP118122.1 Protein Homology CDS 2752104 2753012 . - 0 ID=cds-WJG95583.1;Parent=gene-PUW34_13470;Dbxref=NCBI_GP:WJG95583.1;Name=WJG95583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=PUW34_13470;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WJG95583.1;transl_table=11 CP118122.1 Genbank gene 2753070 2754191 . - . ID=gene-PUW34_13475;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=PUW34_13475 CP118122.1 Protein Homology CDS 2753070 2754191 . - 0 ID=cds-WJG95584.1;Parent=gene-PUW34_13475;Dbxref=NCBI_GP:WJG95584.1;Name=WJG95584.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=PUW34_13475;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WJG95584.1;transl_table=11 CP118122.1 Genbank gene 2754201 2755271 . - . ID=gene-PUW34_13480;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=PUW34_13480 CP118122.1 Protein Homology CDS 2754201 2755271 . - 0 ID=cds-WJG95585.1;Parent=gene-PUW34_13480;Dbxref=NCBI_GP:WJG95585.1;Name=WJG95585.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=PUW34_13480;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WJG95585.1;transl_table=11 CP118122.1 Genbank gene 2755711 2756229 . + . ID=gene-PUW34_13485;Name=PUW34_13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13485 CP118122.1 Protein Homology CDS 2755711 2756229 . + 0 ID=cds-WJG95586.1;Parent=gene-PUW34_13485;Dbxref=NCBI_GP:WJG95586.1;Name=WJG95586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=PUW34_13485;product=YfiR family protein;protein_id=WJG95586.1;transl_table=11 CP118122.1 Genbank gene 2756222 2757442 . + . ID=gene-PUW34_13490;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=PUW34_13490 CP118122.1 Protein Homology CDS 2756222 2757442 . + 0 ID=cds-WJG95587.1;Parent=gene-PUW34_13490;Dbxref=NCBI_GP:WJG95587.1;Name=WJG95587.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=PUW34_13490;product=diguanylate cyclase DgcN;protein_id=WJG95587.1;transl_table=11 CP118122.1 Genbank gene 2757599 2757946 . - . ID=gene-PUW34_13495;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=PUW34_13495 CP118122.1 Protein Homology CDS 2757599 2757946 . - 0 ID=cds-WJG95588.1;Parent=gene-PUW34_13495;Dbxref=NCBI_GP:WJG95588.1;Name=WJG95588.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=PUW34_13495;product=50S ribosomal protein L19;protein_id=WJG95588.1;transl_table=11 CP118122.1 Genbank gene 2757987 2758754 . - . ID=gene-PUW34_13500;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=PUW34_13500 CP118122.1 Protein Homology CDS 2757987 2758754 . - 0 ID=cds-WJG95589.1;Parent=gene-PUW34_13500;Dbxref=NCBI_GP:WJG95589.1;Name=WJG95589.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=PUW34_13500;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WJG95589.1;transl_table=11 CP118122.1 Genbank gene 2758799 2759347 . - . ID=gene-PUW34_13505;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=PUW34_13505 CP118122.1 Protein Homology CDS 2758799 2759347 . - 0 ID=cds-WJG98999.1;Parent=gene-PUW34_13505;Dbxref=NCBI_GP:WJG98999.1;Name=WJG98999.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=PUW34_13505;product=ribosome maturation factor RimM;protein_id=WJG98999.1;transl_table=11 CP118122.1 Genbank gene 2759366 2759614 . - . ID=gene-PUW34_13510;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=PUW34_13510 CP118122.1 Protein Homology CDS 2759366 2759614 . - 0 ID=cds-WJG95590.1;Parent=gene-PUW34_13510;Dbxref=NCBI_GP:WJG95590.1;Name=WJG95590.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=PUW34_13510;product=30S ribosomal protein S16;protein_id=WJG95590.1;transl_table=11 CP118122.1 Genbank gene 2759867 2761228 . - . ID=gene-PUW34_13515;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=PUW34_13515 CP118122.1 Protein Homology CDS 2759867 2761228 . - 0 ID=cds-WJG95591.1;Parent=gene-PUW34_13515;Dbxref=NCBI_GP:WJG95591.1;Name=WJG95591.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=PUW34_13515;product=signal recognition particle protein;protein_id=WJG95591.1;transl_table=11 CP118122.1 Genbank gene 2761394 2762185 . + . ID=gene-PUW34_13520;Name=PUW34_13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13520 CP118122.1 Protein Homology CDS 2761394 2762185 . + 0 ID=cds-WJG95592.1;Parent=gene-PUW34_13520;Dbxref=NCBI_GP:WJG95592.1;Name=WJG95592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=PUW34_13520;product=inner membrane protein YpjD;protein_id=WJG95592.1;transl_table=11 CP118122.1 Genbank gene 2762205 2763491 . + . ID=gene-PUW34_13525;Name=PUW34_13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13525 CP118122.1 Protein Homology CDS 2762205 2763491 . + 0 ID=cds-WJG99000.1;Parent=gene-PUW34_13525;Dbxref=NCBI_GP:WJG99000.1;Name=WJG99000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=PUW34_13525;product=HlyC/CorC family transporter;protein_id=WJG99000.1;transl_table=11 CP118122.1 Genbank gene 2763612 2764217 . + . ID=gene-PUW34_13530;Name=PUW34_13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13530 CP118122.1 Protein Homology CDS 2763612 2764217 . + 0 ID=cds-WJG95593.1;Parent=gene-PUW34_13530;Dbxref=NCBI_GP:WJG95593.1;Name=WJG95593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=PUW34_13530;product=cytoplasmic protein;protein_id=WJG95593.1;transl_table=11 CP118122.1 Genbank gene 2764252 2764842 . - . ID=gene-PUW34_13535;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=PUW34_13535 CP118122.1 Protein Homology CDS 2764252 2764842 . - 0 ID=cds-WJG95594.1;Parent=gene-PUW34_13535;Dbxref=NCBI_GP:WJG95594.1;Name=WJG95594.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=PUW34_13535;product=nucleotide exchange factor GrpE;protein_id=WJG95594.1;transl_table=11 CP118122.1 Genbank pseudogene 2764966 2765843 . + . ID=gene-PUW34_13540;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=pseudogene;locus_tag=PUW34_13540;pseudo=true CP118122.1 Protein Homology CDS 2764966 2765843 . + 0 ID=cds-PUW34_13540;Parent=gene-PUW34_13540;Note=frameshifted;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: protein motif:HMM:NF039482.1;locus_tag=PUW34_13540;product=NAD(+) kinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2765929 2767590 . + . ID=gene-PUW34_13545;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=PUW34_13545 CP118122.1 Protein Homology CDS 2765929 2767590 . + 0 ID=cds-WJG95595.1;Parent=gene-PUW34_13545;Dbxref=NCBI_GP:WJG95595.1;Name=WJG95595.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=PUW34_13545;product=DNA repair protein RecN;protein_id=WJG95595.1;transl_table=11 CP118122.1 Genbank gene 2767739 2768077 . + . ID=gene-PUW34_13550;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=PUW34_13550 CP118122.1 Protein Homology CDS 2767739 2768077 . + 0 ID=cds-WJG95596.1;Parent=gene-PUW34_13550;Dbxref=NCBI_GP:WJG95596.1;Name=WJG95596.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=PUW34_13550;product=outer membrane protein assembly factor BamE;protein_id=WJG95596.1;transl_table=11 CP118122.1 Genbank gene 2768242 2768532 . - . ID=gene-PUW34_13555;Name=PUW34_13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13555 CP118122.1 Protein Homology CDS 2768242 2768532 . - 0 ID=cds-WJG95597.1;Parent=gene-PUW34_13555;Dbxref=NCBI_GP:WJG95597.1;Name=WJG95597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=PUW34_13555;product=RnfH family protein;protein_id=WJG95597.1;transl_table=11 CP118122.1 Genbank gene 2768522 2768959 . - . ID=gene-PUW34_13560;Name=PUW34_13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13560 CP118122.1 Protein Homology CDS 2768522 2768959 . - 0 ID=cds-WJG95598.1;Parent=gene-PUW34_13560;Dbxref=NCBI_GP:WJG95598.1;Name=WJG95598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=PUW34_13560;product=type II toxin-antitoxin system RatA family toxin;protein_id=WJG95598.1;transl_table=11 CP118122.1 Genbank gene 2769148 2769630 . + . ID=gene-PUW34_13565;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=PUW34_13565 CP118122.1 Protein Homology CDS 2769148 2769630 . + 0 ID=cds-WJG95599.1;Parent=gene-PUW34_13565;Dbxref=NCBI_GP:WJG95599.1;Name=WJG95599.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=PUW34_13565;product=SsrA-binding protein SmpB;protein_id=WJG95599.1;transl_table=11 CP118122.1 Genbank pseudogene 2770244 2781701 . + . ID=gene-PUW34_13570;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=pseudogene;locus_tag=PUW34_13570;pseudo=true CP118122.1 Protein Homology CDS 2770244 2781701 . + 0 ID=cds-PUW34_13570;Parent=gene-PUW34_13570;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=PUW34_13570;product=biofilm-associated protein BapA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2781766 2783175 . + . ID=gene-PUW34_13575;Name=PUW34_13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13575 CP118122.1 Protein Homology CDS 2781766 2783175 . + 0 ID=cds-WJG95600.1;Parent=gene-PUW34_13575;Dbxref=NCBI_GP:WJG95600.1;Name=WJG95600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=PUW34_13575;product=TolC family outer membrane protein;protein_id=WJG95600.1;transl_table=11 CP118122.1 Genbank pseudogene 2783172 2785350 . + . ID=gene-PUW34_13580;Name=PUW34_13580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13580;pseudo=true CP118122.1 Protein Homology CDS 2783172 2785350 . + 0 ID=cds-PUW34_13580;Parent=gene-PUW34_13580;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=PUW34_13580;product=type I secretion system permease/ATPase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2785358 2786521 . + . ID=gene-PUW34_13585;Name=PUW34_13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13585 CP118122.1 Protein Homology CDS 2785358 2786521 . + 0 ID=cds-WJG99001.1;Parent=gene-PUW34_13585;Dbxref=NCBI_GP:WJG99001.1;Name=WJG99001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=PUW34_13585;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WJG99001.1;transl_table=11 CP118122.1 Genbank gene 2786593 2786955 . + . ID=gene-PUW34_13590;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=PUW34_13590 CP118122.1 cmsearch tmRNA 2786593 2786955 . + . ID=rna-PUW34_13590;Parent=gene-PUW34_13590;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_13590;product=transfer-messenger RNA CP118122.1 cmsearch exon 2786593 2786955 . + . ID=exon-PUW34_13590-1;Parent=rna-PUW34_13590;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_13590;product=transfer-messenger RNA CP118122.1 Genbank gene 2787053 2787646 . + . ID=gene-PUW34_13595;Name=PUW34_13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13595 CP118122.1 Protein Homology CDS 2787053 2787646 . + 0 ID=cds-WJG95601.1;Parent=gene-PUW34_13595;Dbxref=NCBI_GP:WJG95601.1;Name=WJG95601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142974.1;locus_tag=PUW34_13595;product=hypothetical protein;protein_id=WJG95601.1;transl_table=11 CP118122.1 Genbank gene 2788044 2788847 . + . ID=gene-PUW34_13600;Name=PUW34_13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13600 CP118122.1 Protein Homology CDS 2788044 2788847 . + 0 ID=cds-WJG95602.1;Parent=gene-PUW34_13600;Dbxref=NCBI_GP:WJG95602.1;Name=WJG95602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445378.1;locus_tag=PUW34_13600;product=DUF3800 domain-containing protein;protein_id=WJG95602.1;transl_table=11 CP118122.1 Genbank pseudogene 2789544 2789627 . + . ID=gene-PUW34_13605;Name=PUW34_13605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13605;pseudo=true CP118122.1 Protein Homology CDS 2789544 2789627 . + 0 ID=cds-PUW34_13605;Parent=gene-PUW34_13605;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=PUW34_13605;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2789643 2790754 . - . ID=gene-PUW34_13610;Name=PUW34_13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13610 CP118122.1 Protein Homology CDS 2790493 2790754 . - 0 ID=cds-WJG95603.1;Parent=gene-PUW34_13610;Dbxref=NCBI_GP:WJG95603.1;Name=WJG95603.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=PUW34_13610;product=IS3-like element IS1351 family transposase;protein_id=WJG95603.1;transl_table=11 CP118122.1 Protein Homology CDS 2789643 2790493 . - 2 ID=cds-WJG95603.1;Parent=gene-PUW34_13610;Dbxref=NCBI_GP:WJG95603.1;Name=WJG95603.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=PUW34_13610;product=IS3-like element IS1351 family transposase;protein_id=WJG95603.1;transl_table=11 CP118122.1 Genbank pseudogene 2790830 2791213 . + . ID=gene-PUW34_13615;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=PUW34_13615;pseudo=true CP118122.1 Protein Homology CDS 2790830 2791213 . + 0 ID=cds-PUW34_13615;Parent=gene-PUW34_13615;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=PUW34_13615;product=IS200/IS605-like element IS200F family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2791839 2792954 . + . ID=gene-PUW34_13620;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=PUW34_13620 CP118122.1 Protein Homology CDS 2791839 2792954 . + 0 ID=cds-WJG95604.1;Parent=gene-PUW34_13620;Dbxref=NCBI_GP:WJG95604.1;Name=WJG95604.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=PUW34_13620;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WJG95604.1;transl_table=11 CP118122.1 Genbank gene 2793035 2796691 . + . ID=gene-PUW34_13625;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=PUW34_13625 CP118122.1 Protein Homology CDS 2793035 2796691 . + 0 ID=cds-WJG95605.1;Parent=gene-PUW34_13625;Dbxref=NCBI_GP:WJG95605.1;Name=WJG95605.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=PUW34_13625;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WJG95605.1;transl_table=11 CP118122.1 Genbank pseudogene 2796801 2798046 . + . ID=gene-PUW34_13630;Name=PUW34_13630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13630;pseudo=true CP118122.1 Protein Homology CDS 2796801 2798046 . + 0 ID=cds-PUW34_13630;Parent=gene-PUW34_13630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=PUW34_13630;product=esterase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2798078 2799007 . + . ID=gene-PUW34_13635;Name=PUW34_13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13635 CP118122.1 Protein Homology CDS 2798078 2799007 . + 0 ID=cds-WJG95606.1;Parent=gene-PUW34_13635;Dbxref=NCBI_GP:WJG95606.1;Name=WJG95606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=PUW34_13635;product=alpha/beta hydrolase;protein_id=WJG95606.1;transl_table=11 CP118122.1 Genbank gene 2799049 2801223 . - . ID=gene-PUW34_13640;Name=PUW34_13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13640 CP118122.1 Protein Homology CDS 2799049 2801223 . - 0 ID=cds-WJG95607.1;Parent=gene-PUW34_13640;Dbxref=NCBI_GP:WJG95607.1;Name=WJG95607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=PUW34_13640;product=TonB-dependent siderophore receptor;protein_id=WJG95607.1;transl_table=11 CP118122.1 Genbank pseudogene 2801767 2802086 . - . ID=gene-PUW34_13645;Name=PUW34_13645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13645;pseudo=true CP118122.1 Protein Homology CDS 2801767 2802086 . - 0 ID=cds-PUW34_13645;Parent=gene-PUW34_13645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=PUW34_13645;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2802261 2803313 . - . ID=gene-PUW34_13650;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=pseudogene;locus_tag=PUW34_13650;pseudo=true CP118122.1 Protein Homology CDS 2802261 2803313 . - 0 ID=cds-PUW34_13650;Parent=gene-PUW34_13650;Note=internal stop;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=PUW34_13650;product=SPI-2 type III secretion system effector PipB2;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2803832 2804761 . + . ID=gene-PUW34_13655;Name=PUW34_13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13655 CP118122.1 Protein Homology CDS 2803832 2804761 . + 0 ID=cds-WJG95608.1;Parent=gene-PUW34_13655;Dbxref=NCBI_GP:WJG95608.1;Name=WJG95608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=PUW34_13655;product=VirK family antimicrobial peptide resistance protein;protein_id=WJG95608.1;transl_table=11 CP118122.1 Genbank gene 2805055 2805951 . + . ID=gene-PUW34_13660;Name=PUW34_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13660 CP118122.1 Protein Homology CDS 2805055 2805951 . + 0 ID=cds-WJG95609.1;Parent=gene-PUW34_13660;Dbxref=NCBI_GP:WJG95609.1;Name=WJG95609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=PUW34_13660;product=antimicrobial resistance protein Mig-14;protein_id=WJG95609.1;transl_table=11 CP118122.1 Genbank gene 2806673 2807686 . - . ID=gene-PUW34_13665;Name=PUW34_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13665 CP118122.1 Protein Homology CDS 2806673 2807686 . - 0 ID=cds-WJG95610.1;Parent=gene-PUW34_13665;Dbxref=NCBI_GP:WJG95610.1;Name=WJG95610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=PUW34_13665;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WJG95610.1;transl_table=11 CP118122.1 Genbank gene 2807819 2809234 . - . ID=gene-PUW34_13670;Name=PUW34_13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13670 CP118122.1 Protein Homology CDS 2807819 2809234 . - 0 ID=cds-WJG99002.1;Parent=gene-PUW34_13670;Dbxref=NCBI_GP:WJG99002.1;Name=WJG99002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=PUW34_13670;product=sensor histidine kinase;protein_id=WJG99002.1;transl_table=11 CP118122.1 Genbank gene 2809221 2809895 . - . ID=gene-PUW34_13675;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=PUW34_13675 CP118122.1 Protein Homology CDS 2809221 2809895 . - 0 ID=cds-WJG95611.1;Parent=gene-PUW34_13675;Dbxref=NCBI_GP:WJG95611.1;Name=WJG95611.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=PUW34_13675;product=transcriptional regulator TctD;protein_id=WJG95611.1;transl_table=11 CP118122.1 Genbank gene 2810050 2811027 . + . ID=gene-PUW34_13680;Name=PUW34_13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13680 CP118122.1 Protein Homology CDS 2810050 2811027 . + 0 ID=cds-WJG95612.1;Parent=gene-PUW34_13680;Dbxref=NCBI_GP:WJG95612.1;Name=WJG95612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=PUW34_13680;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WJG95612.1;transl_table=11 CP118122.1 Genbank gene 2811039 2811473 . + . ID=gene-PUW34_13685;Name=PUW34_13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13685 CP118122.1 Protein Homology CDS 2811039 2811473 . + 0 ID=cds-WJG95613.1;Parent=gene-PUW34_13685;Dbxref=NCBI_GP:WJG95613.1;Name=WJG95613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=PUW34_13685;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WJG95613.1;transl_table=11 CP118122.1 Genbank pseudogene 2811484 2812997 . + . ID=gene-PUW34_13690;Name=PUW34_13690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13690;pseudo=true CP118122.1 Protein Homology CDS 2811484 2812997 . + 0 ID=cds-PUW34_13690;Parent=gene-PUW34_13690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=PUW34_13690;product=tripartite tricarboxylate transporter permease;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2813301 2814278 . + . ID=gene-PUW34_13695;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=PUW34_13695 CP118122.1 Protein Homology CDS 2813301 2814278 . + 0 ID=cds-WJG95614.1;Parent=gene-PUW34_13695;Dbxref=NCBI_GP:WJG95614.1;Name=WJG95614.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=PUW34_13695;product=glutarate dioxygenase GlaH;protein_id=WJG95614.1;transl_table=11 CP118122.1 Genbank pseudogene 2814304 2815565 . + . ID=gene-PUW34_13700;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=pseudogene;locus_tag=PUW34_13700;pseudo=true CP118122.1 Protein Homology CDS 2814304 2815565 . + 0 ID=cds-PUW34_13700;Parent=gene-PUW34_13700;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=PUW34_13700;product=L-2-hydroxyglutarate oxidase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2815587 2817035 . + . ID=gene-PUW34_13705;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=PUW34_13705 CP118122.1 Protein Homology CDS 2815587 2817035 . + 0 ID=cds-WJG95615.1;Parent=gene-PUW34_13705;Dbxref=NCBI_GP:WJG95615.1;Name=WJG95615.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=PUW34_13705;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WJG95615.1;transl_table=11 CP118122.1 Genbank pseudogene 2817050 2818329 . + . ID=gene-PUW34_13710;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=pseudogene;locus_tag=PUW34_13710;pseudo=true CP118122.1 Protein Homology CDS 2817050 2818329 . + 0 ID=cds-PUW34_13710;Parent=gene-PUW34_13710;Note=frameshifted;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=PUW34_13710;product=4-aminobutyrate--2-oxoglutarate transaminase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2818459 2819859 . + . ID=gene-PUW34_13715;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=PUW34_13715 CP118122.1 Protein Homology CDS 2818459 2819859 . + 0 ID=cds-WJG95616.1;Parent=gene-PUW34_13715;Dbxref=NCBI_GP:WJG95616.1;Name=WJG95616.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=PUW34_13715;product=GABA permease;protein_id=WJG95616.1;transl_table=11 CP118122.1 Genbank gene 2819901 2820578 . + . ID=gene-PUW34_13720;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=PUW34_13720 CP118122.1 Protein Homology CDS 2819901 2820578 . + 0 ID=cds-WJG95617.1;Parent=gene-PUW34_13720;Dbxref=NCBI_GP:WJG95617.1;Name=WJG95617.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=PUW34_13720;product=DNA-binding transcriptional regulator CsiR;protein_id=WJG95617.1;transl_table=11 CP118122.1 Genbank gene 2820600 2821049 . - . ID=gene-PUW34_13725;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=PUW34_13725 CP118122.1 Protein Homology CDS 2820600 2821049 . - 0 ID=cds-WJG95618.1;Parent=gene-PUW34_13725;Dbxref=NCBI_GP:WJG95618.1;Name=WJG95618.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=PUW34_13725;product=peptidoglycan-binding protein LysM;protein_id=WJG95618.1;transl_table=11 CP118122.1 Genbank gene 2821149 2821307 . - . ID=gene-PUW34_13730;Name=PUW34_13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13730 CP118122.1 Protein Homology CDS 2821149 2821307 . - 0 ID=cds-WJG95619.1;Parent=gene-PUW34_13730;Dbxref=NCBI_GP:WJG95619.1;Name=WJG95619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=PUW34_13730;product=YqaE/Pmp3 family membrane protein;protein_id=WJG95619.1;transl_table=11 CP118122.1 Genbank gene 2821490 2821789 . + . ID=gene-PUW34_13735;Name=PUW34_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13735 CP118122.1 Protein Homology CDS 2821490 2821789 . + 0 ID=cds-WJG95620.1;Parent=gene-PUW34_13735;Dbxref=NCBI_GP:WJG95620.1;Name=WJG95620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=PUW34_13735;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WJG95620.1;transl_table=11 CP118122.1 Genbank pseudogene 2821799 2822325 . + . ID=gene-PUW34_13740;Name=PUW34_13740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13740;pseudo=true CP118122.1 Protein Homology CDS 2821799 2822325 . + 0 ID=cds-PUW34_13740;Parent=gene-PUW34_13740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=PUW34_13740;product=rhodanese family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2822404 2822583 . + . ID=gene-PUW34_13745;Name=PUW34_13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13745 CP118122.1 Protein Homology CDS 2822404 2822583 . + 0 ID=cds-WJG95621.1;Parent=gene-PUW34_13745;Dbxref=NCBI_GP:WJG95621.1;Name=WJG95621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=PUW34_13745;product=hypothetical protein;protein_id=WJG95621.1;transl_table=11 CP118122.1 Genbank pseudogene 2822673 2823074 . - . ID=gene-PUW34_13750;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=pseudogene;locus_tag=PUW34_13750;pseudo=true CP118122.1 Protein Homology CDS 2822673 2823074 . - 0 ID=cds-PUW34_13750;Parent=gene-PUW34_13750;Note=internal stop;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=PUW34_13750;product=DNA-binding protein StpA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2823772 2824221 . + . ID=gene-PUW34_13755;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=PUW34_13755 CP118122.1 Protein Homology CDS 2823772 2824221 . + 0 ID=cds-WJG95622.1;Parent=gene-PUW34_13755;Dbxref=NCBI_GP:WJG95622.1;Name=WJG95622.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=PUW34_13755;product=L-alanine exporter AlaE;protein_id=WJG95622.1;transl_table=11 CP118122.1 Genbank pseudogene 2824264 2824605 . - . ID=gene-PUW34_13760;Name=PUW34_13760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13760;pseudo=true CP118122.1 Protein Homology CDS 2824264 2824605 . - 0 ID=cds-PUW34_13760;Parent=gene-PUW34_13760;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=PUW34_13760;product=DUF2002 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2824767 2825093 . + . ID=gene-PUW34_13765;Name=PUW34_13765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_13765;pseudo=true CP118122.1 Protein Homology CDS 2824767 2825093 . + 0 ID=cds-PUW34_13765;Parent=gene-PUW34_13765;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914293.1;locus_tag=PUW34_13765;product=DUF883 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2825177 2826511 . - . ID=gene-PUW34_13770;Name=PUW34_13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13770 CP118122.1 Protein Homology CDS 2825177 2826511 . - 0 ID=cds-WJG95623.1;Parent=gene-PUW34_13770;Dbxref=NCBI_GP:WJG95623.1;Name=WJG95623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=PUW34_13770;product=PLP-dependent aminotransferase family protein;protein_id=WJG95623.1;transl_table=11 CP118122.1 Genbank gene 2826600 2827031 . + . ID=gene-PUW34_13775;Name=PUW34_13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13775 CP118122.1 Protein Homology CDS 2826600 2827031 . + 0 ID=cds-WJG99003.1;Parent=gene-PUW34_13775;Dbxref=NCBI_GP:WJG99003.1;Name=WJG99003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=PUW34_13775;product=carboxymuconolactone decarboxylase family protein;protein_id=WJG99003.1;transl_table=11 CP118122.1 Genbank gene 2827303 2827548 . + . ID=gene-PUW34_13780;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=PUW34_13780 CP118122.1 Protein Homology CDS 2827303 2827548 . + 0 ID=cds-WJG95624.1;Parent=gene-PUW34_13780;Dbxref=NCBI_GP:WJG95624.1;Name=WJG95624.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=PUW34_13780;product=glutaredoxin-like protein NrdH;protein_id=WJG95624.1;transl_table=11 CP118122.1 Genbank gene 2827545 2827952 . + . ID=gene-PUW34_13785;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=PUW34_13785 CP118122.1 Protein Homology CDS 2827545 2827952 . + 0 ID=cds-WJG95625.1;Parent=gene-PUW34_13785;Dbxref=NCBI_GP:WJG95625.1;Name=WJG95625.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=PUW34_13785;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WJG95625.1;transl_table=11 CP118122.1 Genbank gene 2827925 2830069 . + . ID=gene-PUW34_13790;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=PUW34_13790 CP118122.1 Protein Homology CDS 2827925 2830069 . + 0 ID=cds-WJG95626.1;Parent=gene-PUW34_13790;Dbxref=NCBI_GP:WJG95626.1;Name=WJG95626.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=PUW34_13790;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WJG95626.1;transl_table=11 CP118122.1 Genbank gene 2830080 2831039 . + . ID=gene-PUW34_13795;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=PUW34_13795 CP118122.1 Protein Homology CDS 2830080 2831039 . + 0 ID=cds-WJG95627.1;Parent=gene-PUW34_13795;Dbxref=NCBI_GP:WJG95627.1;Name=WJG95627.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=PUW34_13795;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WJG95627.1;transl_table=11 CP118122.1 Genbank gene 2831394 2832596 . + . ID=gene-PUW34_13800;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=PUW34_13800 CP118122.1 Protein Homology CDS 2831394 2832596 . + 0 ID=cds-WJG95628.1;Parent=gene-PUW34_13800;Dbxref=NCBI_GP:WJG95628.1;Name=WJG95628.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=PUW34_13800;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WJG95628.1;transl_table=11 CP118122.1 Genbank gene 2832589 2833653 . + . ID=gene-PUW34_13805;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=PUW34_13805 CP118122.1 Protein Homology CDS 2832589 2833653 . + 0 ID=cds-WJG95629.1;Parent=gene-PUW34_13805;Dbxref=NCBI_GP:WJG95629.1;Name=WJG95629.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=PUW34_13805;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WJG95629.1;transl_table=11 CP118122.1 Genbank gene 2833723 2834718 . + . ID=gene-PUW34_13810;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=PUW34_13810 CP118122.1 Protein Homology CDS 2833723 2834718 . + 0 ID=cds-WJG95630.1;Parent=gene-PUW34_13810;Dbxref=NCBI_GP:WJG95630.1;Name=WJG95630.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=PUW34_13810;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WJG95630.1;transl_table=11 CP118122.1 Genbank gene 2834883 2836067 . + . ID=gene-PUW34_13815;Name=PUW34_13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13815 CP118122.1 Protein Homology CDS 2834883 2836067 . + 0 ID=cds-WJG95631.1;Parent=gene-PUW34_13815;Dbxref=NCBI_GP:WJG95631.1;Name=WJG95631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=PUW34_13815;product=MFS transporter;protein_id=WJG95631.1;transl_table=11 CP118122.1 Genbank gene 2836564 2837094 . + . ID=gene-PUW34_13820;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=PUW34_13820 CP118122.1 Protein Homology CDS 2836564 2837094 . + 0 ID=cds-WJG95632.1;Parent=gene-PUW34_13820;Dbxref=NCBI_GP:WJG95632.1;Name=WJG95632.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=PUW34_13820;product=transcriptional repressor MprA;protein_id=WJG95632.1;transl_table=11 CP118122.1 Genbank gene 2837221 2838393 . + . ID=gene-PUW34_13825;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=PUW34_13825 CP118122.1 Protein Homology CDS 2837221 2838393 . + 0 ID=cds-WJG95633.1;Parent=gene-PUW34_13825;Dbxref=NCBI_GP:WJG95633.1;Name=WJG95633.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=PUW34_13825;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WJG95633.1;transl_table=11 CP118122.1 Genbank pseudogene 2838410 2839947 . + . ID=gene-PUW34_13830;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=PUW34_13830;pseudo=true CP118122.1 Protein Homology CDS 2838410 2839947 . + 0 ID=cds-PUW34_13830;Parent=gene-PUW34_13830;Note=frameshifted;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=PUW34_13830;product=multidrug efflux MFS transporter permease subunit EmrB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2839996 2841366 . - . ID=gene-PUW34_13835;Name=PUW34_13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13835 CP118122.1 Protein Homology CDS 2839996 2841366 . - 0 ID=cds-WJG95634.1;Parent=gene-PUW34_13835;Dbxref=NCBI_GP:WJG95634.1;Name=WJG95634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=PUW34_13835;product=carbohydrate porin;protein_id=WJG95634.1;transl_table=11 CP118122.1 Genbank gene 2841711 2842226 . - . ID=gene-PUW34_13840;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=PUW34_13840 CP118122.1 Protein Homology CDS 2841711 2842226 . - 0 ID=cds-WJG95635.1;Parent=gene-PUW34_13840;Dbxref=NCBI_GP:WJG95635.1;Name=WJG95635.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=PUW34_13840;product=S-ribosylhomocysteine lyase;protein_id=WJG95635.1;transl_table=11 CP118122.1 Genbank gene 2842376 2843932 . - . ID=gene-PUW34_13845;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=PUW34_13845 CP118122.1 Protein Homology CDS 2842376 2843932 . - 0 ID=cds-WJG95636.1;Parent=gene-PUW34_13845;Dbxref=NCBI_GP:WJG95636.1;Name=WJG95636.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=PUW34_13845;product=glutamate--cysteine ligase;protein_id=WJG95636.1;transl_table=11 CP118122.1 Genbank gene 2844009 2844434 . - . ID=gene-PUW34_13850;Name=PUW34_13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13850 CP118122.1 Protein Homology CDS 2844009 2844434 . - 0 ID=cds-WJG95637.1;Parent=gene-PUW34_13850;Dbxref=NCBI_GP:WJG95637.1;Name=WJG95637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=PUW34_13850;product=DedA family protein;protein_id=WJG95637.1;transl_table=11 CP118122.1 Genbank pseudogene 2844431 2844996 . - . ID=gene-PUW34_13855;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=pseudogene;locus_tag=PUW34_13855;pseudo=true CP118122.1 Protein Homology CDS 2844431 2844996 . - 0 ID=cds-PUW34_13855;Parent=gene-PUW34_13855;Note=frameshifted;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=PUW34_13855;product=fructose-1-phosphate/6-phosphogluconate phosphatase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2845233 2845309 . - . ID=gene-PUW34_13860;Name=PUW34_13860;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_13860 CP118122.1 tRNAscan-SE tRNA 2845233 2845309 . - . ID=rna-PUW34_13860;Parent=gene-PUW34_13860;anticodon=(pos:complement(2845273..2845275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13860;product=tRNA-Arg CP118122.1 tRNAscan-SE exon 2845233 2845309 . - . ID=exon-PUW34_13860-1;Parent=rna-PUW34_13860;anticodon=(pos:complement(2845273..2845275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13860;product=tRNA-Arg CP118122.1 Genbank gene 2845503 2845579 . - . ID=gene-PUW34_13865;Name=PUW34_13865;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_13865 CP118122.1 tRNAscan-SE tRNA 2845503 2845579 . - . ID=rna-PUW34_13865;Parent=gene-PUW34_13865;anticodon=(pos:complement(2845543..2845545));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13865;product=tRNA-Arg CP118122.1 tRNAscan-SE exon 2845503 2845579 . - . ID=exon-PUW34_13865-1;Parent=rna-PUW34_13865;anticodon=(pos:complement(2845543..2845545));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13865;product=tRNA-Arg CP118122.1 Genbank gene 2845642 2845718 . - . ID=gene-PUW34_13870;Name=PUW34_13870;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_13870 CP118122.1 tRNAscan-SE tRNA 2845642 2845718 . - . ID=rna-PUW34_13870;Parent=gene-PUW34_13870;anticodon=(pos:complement(2845682..2845684));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13870;product=tRNA-Arg CP118122.1 tRNAscan-SE exon 2845642 2845718 . - . ID=exon-PUW34_13870-1;Parent=rna-PUW34_13870;anticodon=(pos:complement(2845682..2845684));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13870;product=tRNA-Arg CP118122.1 Genbank gene 2845722 2845813 . - . ID=gene-PUW34_13875;Name=PUW34_13875;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_13875 CP118122.1 tRNAscan-SE tRNA 2845722 2845813 . - . ID=rna-PUW34_13875;Parent=gene-PUW34_13875;anticodon=(pos:complement(2845777..2845779));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13875;product=tRNA-Ser CP118122.1 tRNAscan-SE exon 2845722 2845813 . - . ID=exon-PUW34_13875-1;Parent=rna-PUW34_13875;anticodon=(pos:complement(2845777..2845779));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_13875;product=tRNA-Ser CP118122.1 Genbank gene 2846117 2846302 . - . ID=gene-PUW34_13880;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=PUW34_13880 CP118122.1 Protein Homology CDS 2846117 2846302 . - 0 ID=cds-WJG95638.1;Parent=gene-PUW34_13880;Dbxref=NCBI_GP:WJG95638.1;Name=WJG95638.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=PUW34_13880;product=carbon storage regulator CsrA;protein_id=WJG95638.1;transl_table=11 CP118122.1 Genbank gene 2846537 2849167 . - . ID=gene-PUW34_13885;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=PUW34_13885 CP118122.1 Protein Homology CDS 2846537 2849167 . - 0 ID=cds-WJG95639.1;Parent=gene-PUW34_13885;Dbxref=NCBI_GP:WJG95639.1;Name=WJG95639.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=PUW34_13885;product=alanine--tRNA ligase;protein_id=WJG95639.1;transl_table=11 CP118122.1 Genbank gene 2849403 2849903 . - . ID=gene-PUW34_13890;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=PUW34_13890 CP118122.1 Protein Homology CDS 2849403 2849903 . - 0 ID=cds-WJG95640.1;Parent=gene-PUW34_13890;Dbxref=NCBI_GP:WJG95640.1;Name=WJG95640.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=PUW34_13890;product=recombination regulator RecX;protein_id=WJG95640.1;transl_table=11 CP118122.1 Genbank gene 2850020 2851081 . - . ID=gene-PUW34_13895;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=PUW34_13895 CP118122.1 Protein Homology CDS 2850020 2851081 . - 0 ID=cds-WJG95641.1;Parent=gene-PUW34_13895;Dbxref=NCBI_GP:WJG95641.1;Name=WJG95641.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=PUW34_13895;product=recombinase RecA;protein_id=WJG95641.1;transl_table=11 CP118122.1 Genbank pseudogene 2851166 2851662 . - . ID=gene-PUW34_13900;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=pseudogene;locus_tag=PUW34_13900;pseudo=true CP118122.1 Protein Homology CDS 2851166 2851662 . - 0 ID=cds-PUW34_13900;Parent=gene-PUW34_13900;Note=frameshifted;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=PUW34_13900;product=nicotinamide-nucleotide amidase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2851858 2852103 . + . ID=gene-PUW34_13905;Name=PUW34_13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13905 CP118122.1 Protein Homology CDS 2851858 2852103 . + 0 ID=cds-WJG95642.1;Parent=gene-PUW34_13905;Dbxref=NCBI_GP:WJG95642.1;Name=WJG95642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=PUW34_13905;product=hypothetical protein;protein_id=WJG95642.1;transl_table=11 CP118122.1 Genbank gene 2852141 2853220 . - . ID=gene-PUW34_13910;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=PUW34_13910 CP118122.1 Protein Homology CDS 2852141 2853220 . - 0 ID=cds-WJG95643.1;Parent=gene-PUW34_13910;Dbxref=NCBI_GP:WJG95643.1;Name=WJG95643.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=PUW34_13910;product=lytic murein transglycosylase B;protein_id=WJG95643.1;transl_table=11 CP118122.1 Genbank gene 2853474 2854037 . + . ID=gene-PUW34_13915;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=PUW34_13915 CP118122.1 Protein Homology CDS 2853474 2854037 . + 0 ID=cds-WJG95644.1;Parent=gene-PUW34_13915;Dbxref=NCBI_GP:WJG95644.1;Name=WJG95644.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=PUW34_13915;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WJG95644.1;transl_table=11 CP118122.1 Genbank gene 2854034 2855005 . + . ID=gene-PUW34_13920;Name=PUW34_13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13920 CP118122.1 Protein Homology CDS 2854034 2855005 . + 0 ID=cds-WJG95645.1;Parent=gene-PUW34_13920;Dbxref=NCBI_GP:WJG95645.1;Name=WJG95645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=PUW34_13920;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WJG95645.1;transl_table=11 CP118122.1 Genbank gene 2855017 2855379 . + . ID=gene-PUW34_13925;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=PUW34_13925 CP118122.1 Protein Homology CDS 2855017 2855379 . + 0 ID=cds-WJG95646.1;Parent=gene-PUW34_13925;Dbxref=NCBI_GP:WJG95646.1;Name=WJG95646.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=PUW34_13925;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WJG95646.1;transl_table=11 CP118122.1 Genbank gene 2855391 2856170 . + . ID=gene-PUW34_13930;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=PUW34_13930 CP118122.1 Protein Homology CDS 2855391 2856170 . + 0 ID=cds-WJG95647.1;Parent=gene-PUW34_13930;Dbxref=NCBI_GP:WJG95647.1;Name=WJG95647.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=PUW34_13930;product=sorbitol-6-phosphate dehydrogenase;protein_id=WJG95647.1;transl_table=11 CP118122.1 Genbank gene 2856247 2856606 . + . ID=gene-PUW34_13935;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=PUW34_13935 CP118122.1 Protein Homology CDS 2856247 2856606 . + 0 ID=cds-WJG95648.1;Parent=gene-PUW34_13935;Dbxref=NCBI_GP:WJG95648.1;Name=WJG95648.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=PUW34_13935;product=transcriptional regulator GutM;protein_id=WJG95648.1;transl_table=11 CP118122.1 Genbank gene 2856804 2857577 . + . ID=gene-PUW34_13940;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=PUW34_13940 CP118122.1 Protein Homology CDS 2856804 2857577 . + 0 ID=cds-WJG95649.1;Parent=gene-PUW34_13940;Dbxref=NCBI_GP:WJG95649.1;Name=WJG95649.1;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=PUW34_13940;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WJG95649.1;transl_table=11 CP118122.1 Genbank gene 2857570 2858535 . + . ID=gene-PUW34_13945;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=PUW34_13945 CP118122.1 Protein Homology CDS 2857570 2858535 . + 0 ID=cds-WJG95650.1;Parent=gene-PUW34_13945;Dbxref=NCBI_GP:WJG95650.1;Name=WJG95650.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=PUW34_13945;product=arabinose-5-phosphate isomerase GutQ;protein_id=WJG95650.1;transl_table=11 CP118122.1 Genbank gene 2858532 2860052 . - . ID=gene-PUW34_13950;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=PUW34_13950 CP118122.1 Protein Homology CDS 2858532 2860052 . - 0 ID=cds-WJG95651.1;Parent=gene-PUW34_13950;Dbxref=NCBI_GP:WJG95651.1;Name=WJG95651.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=PUW34_13950;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WJG95651.1;transl_table=11 CP118122.1 Genbank gene 2860238 2861671 . + . ID=gene-PUW34_13955;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=PUW34_13955 CP118122.1 Protein Homology CDS 2860238 2861671 . + 0 ID=cds-WJG95652.1;Parent=gene-PUW34_13955;Dbxref=NCBI_GP:WJG95652.1;Name=WJG95652.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=PUW34_13955;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WJG95652.1;transl_table=11 CP118122.1 Genbank gene 2861668 2862801 . + . ID=gene-PUW34_13960;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=PUW34_13960 CP118122.1 Protein Homology CDS 2861668 2862801 . + 0 ID=cds-WJG95653.1;Parent=gene-PUW34_13960;Dbxref=NCBI_GP:WJG95653.1;Name=WJG95653.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=PUW34_13960;product=NADH:flavorubredoxin reductase NorW;protein_id=WJG95653.1;transl_table=11 CP118122.1 Genbank gene 2862898 2865138 . - . ID=gene-PUW34_13965;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=PUW34_13965 CP118122.1 Protein Homology CDS 2862898 2865138 . - 0 ID=cds-WJG95654.1;Parent=gene-PUW34_13965;Dbxref=NCBI_GP:WJG95654.1;Name=WJG95654.1;Ontology_term=GO:0036211,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=PUW34_13965;product=carbamoyltransferase HypF;protein_id=WJG95654.1;transl_table=11 CP118122.1 Genbank gene 2865284 2865829 . - . ID=gene-PUW34_13970;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=PUW34_13970 CP118122.1 Protein Homology CDS 2865284 2865829 . - 0 ID=cds-WJG95655.1;Parent=gene-PUW34_13970;Dbxref=NCBI_GP:WJG95655.1;Name=WJG95655.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=PUW34_13970;product=electron transport protein HydN;protein_id=WJG95655.1;transl_table=11 CP118122.1 Genbank gene 2866030 2866839 . - . ID=gene-PUW34_13975;Name=PUW34_13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13975 CP118122.1 Protein Homology CDS 2866030 2866839 . - 0 ID=cds-WJG95656.1;Parent=gene-PUW34_13975;Dbxref=NCBI_GP:WJG95656.1;Name=WJG95656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=PUW34_13975;product=hypothetical protein;protein_id=WJG95656.1;transl_table=11 CP118122.1 Genbank gene 2866866 2867336 . - . ID=gene-PUW34_13980;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=PUW34_13980 CP118122.1 Protein Homology CDS 2866866 2867336 . - 0 ID=cds-WJG95657.1;Parent=gene-PUW34_13980;Dbxref=NCBI_GP:WJG95657.1;Name=WJG95657.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=PUW34_13980;product=hydrogenase maturation peptidase HycI;protein_id=WJG95657.1;transl_table=11 CP118122.1 Genbank gene 2867329 2867739 . - . ID=gene-PUW34_13985;Name=PUW34_13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_13985 CP118122.1 Protein Homology CDS 2867329 2867739 . - 0 ID=cds-WJG95658.1;Parent=gene-PUW34_13985;Dbxref=NCBI_GP:WJG95658.1;Name=WJG95658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=PUW34_13985;product=formate hydrogenlyase maturation HycH family protein;protein_id=WJG95658.1;transl_table=11 CP118122.1 Genbank gene 2867736 2868503 . - . ID=gene-PUW34_13990;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=PUW34_13990 CP118122.1 Protein Homology CDS 2867736 2868503 . - 0 ID=cds-WJG95659.1;Parent=gene-PUW34_13990;Dbxref=NCBI_GP:WJG95659.1;Name=WJG95659.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=PUW34_13990;product=formate hydrogenlyase subunit HycG;protein_id=WJG95659.1;transl_table=11 CP118122.1 Genbank gene 2868503 2869045 . - . ID=gene-PUW34_13995;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=PUW34_13995 CP118122.1 Protein Homology CDS 2868503 2869045 . - 0 ID=cds-WJG95660.1;Parent=gene-PUW34_13995;Dbxref=NCBI_GP:WJG95660.1;Name=WJG95660.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=PUW34_13995;product=formate hydrogenlyase subunit HycF;protein_id=WJG95660.1;transl_table=11 CP118122.1 Genbank gene 2869055 2870740 . - . ID=gene-PUW34_14000;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=PUW34_14000 CP118122.1 Protein Homology CDS 2869055 2870740 . - 0 ID=cds-WJG95661.1;Parent=gene-PUW34_14000;Dbxref=NCBI_GP:WJG95661.1;Name=WJG95661.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=PUW34_14000;product=formate hydrogenlyase subunit HycE;protein_id=WJG95661.1;transl_table=11 CP118122.1 Genbank gene 2870758 2871681 . - . ID=gene-PUW34_14005;Name=PUW34_14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14005 CP118122.1 Protein Homology CDS 2870758 2871681 . - 0 ID=cds-WJG95662.1;Parent=gene-PUW34_14005;Dbxref=NCBI_GP:WJG95662.1;Name=WJG95662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=PUW34_14005;product=respiratory chain complex I subunit 1 family protein;protein_id=WJG95662.1;transl_table=11 CP118122.1 Genbank gene 2871684 2873510 . - . ID=gene-PUW34_14010;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=PUW34_14010 CP118122.1 Protein Homology CDS 2871684 2873510 . - 0 ID=cds-WJG95663.1;Parent=gene-PUW34_14010;Dbxref=NCBI_GP:WJG95663.1;Name=WJG95663.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=PUW34_14010;product=formate hydrogenlyase subunit 3;protein_id=WJG95663.1;transl_table=11 CP118122.1 Genbank gene 2873510 2874118 . - . ID=gene-PUW34_14015;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=PUW34_14015 CP118122.1 Protein Homology CDS 2873510 2874118 . - 0 ID=cds-WJG95664.1;Parent=gene-PUW34_14015;Dbxref=NCBI_GP:WJG95664.1;Name=WJG95664.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=PUW34_14015;product=formate hydrogenlyase subunit HycB;protein_id=WJG95664.1;transl_table=11 CP118122.1 Genbank gene 2874264 2874725 . - . ID=gene-PUW34_14020;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=PUW34_14020 CP118122.1 Protein Homology CDS 2874264 2874725 . - 0 ID=cds-WJG95665.1;Parent=gene-PUW34_14020;Dbxref=NCBI_GP:WJG95665.1;Name=WJG95665.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=PUW34_14020;product=formate hydrogenlyase regulator HycA;protein_id=WJG95665.1;transl_table=11 CP118122.1 Genbank gene 2874935 2875291 . + . ID=gene-PUW34_14025;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW34_14025 CP118122.1 Protein Homology CDS 2874935 2875291 . + 0 ID=cds-WJG95666.1;Parent=gene-PUW34_14025;Dbxref=NCBI_GP:WJG95666.1;Name=WJG95666.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=PUW34_14025;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJG95666.1;transl_table=11 CP118122.1 Genbank gene 2875360 2876232 . + . ID=gene-PUW34_14030;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=PUW34_14030 CP118122.1 Protein Homology CDS 2875360 2876232 . + 0 ID=cds-WJG95667.1;Parent=gene-PUW34_14030;Dbxref=NCBI_GP:WJG95667.1;Name=WJG95667.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=PUW34_14030;product=hydrogenase nickel incorporation protein HypB;protein_id=WJG95667.1;transl_table=11 CP118122.1 Genbank gene 2876223 2876495 . + . ID=gene-PUW34_14035;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=PUW34_14035 CP118122.1 Protein Homology CDS 2876223 2876495 . + 0 ID=cds-WJG95668.1;Parent=gene-PUW34_14035;Dbxref=NCBI_GP:WJG95668.1;Name=WJG95668.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=PUW34_14035;product=hydrogenase 3 maturation protein HypC;protein_id=WJG95668.1;transl_table=11 CP118122.1 Genbank gene 2876495 2877616 . + . ID=gene-PUW34_14040;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=PUW34_14040 CP118122.1 Protein Homology CDS 2876495 2877616 . + 0 ID=cds-WJG95669.1;Parent=gene-PUW34_14040;Dbxref=NCBI_GP:WJG95669.1;Name=WJG95669.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=PUW34_14040;product=hydrogenase formation protein HypD;protein_id=WJG95669.1;transl_table=11 CP118122.1 Genbank gene 2877613 2878623 . + . ID=gene-PUW34_14045;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=PUW34_14045 CP118122.1 Protein Homology CDS 2877613 2878623 . + 0 ID=cds-WJG95670.1;Parent=gene-PUW34_14045;Dbxref=NCBI_GP:WJG95670.1;Name=WJG95670.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=PUW34_14045;product=hydrogenase expression/formation protein HypE;protein_id=WJG95670.1;transl_table=11 CP118122.1 Genbank gene 2878842 2880920 . + . ID=gene-PUW34_14050;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=PUW34_14050 CP118122.1 Protein Homology CDS 2878842 2880920 . + 0 ID=cds-WJG95671.1;Parent=gene-PUW34_14050;Dbxref=NCBI_GP:WJG95671.1;Name=WJG95671.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=PUW34_14050;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WJG95671.1;transl_table=11 CP118122.1 Genbank gene 2880982 2881326 . - . ID=gene-PUW34_14055;Name=PUW34_14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14055 CP118122.1 Protein Homology CDS 2880982 2881326 . - 0 ID=cds-WJG95672.1;Parent=gene-PUW34_14055;Dbxref=NCBI_GP:WJG95672.1;Name=WJG95672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=PUW34_14055;product=nitrous oxide-stimulated promoter family protein;protein_id=WJG95672.1;transl_table=11 CP118122.1 Genbank gene 2881508 2882425 . + . ID=gene-PUW34_14060;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=PUW34_14060 CP118122.1 Protein Homology CDS 2881508 2882425 . + 0 ID=cds-WJG95673.1;Parent=gene-PUW34_14060;Dbxref=NCBI_GP:WJG95673.1;Name=WJG95673.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=PUW34_14060;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WJG95673.1;transl_table=11 CP118122.1 Genbank gene 2882422 2883243 . + . ID=gene-PUW34_14065;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=PUW34_14065 CP118122.1 Protein Homology CDS 2882422 2883243 . + 0 ID=cds-WJG95674.1;Parent=gene-PUW34_14065;Dbxref=NCBI_GP:WJG95674.1;Name=WJG95674.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=PUW34_14065;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WJG95674.1;transl_table=11 CP118122.1 Genbank gene 2883240 2884100 . + . ID=gene-PUW34_14070;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=PUW34_14070 CP118122.1 Protein Homology CDS 2883240 2884100 . + 0 ID=cds-WJG95675.1;Parent=gene-PUW34_14070;Dbxref=NCBI_GP:WJG95675.1;Name=WJG95675.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=PUW34_14070;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WJG95675.1;transl_table=11 CP118122.1 Genbank gene 2884091 2884939 . + . ID=gene-PUW34_14075;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=PUW34_14075 CP118122.1 Protein Homology CDS 2884091 2884939 . + 0 ID=cds-WJG95676.1;Parent=gene-PUW34_14075;Dbxref=NCBI_GP:WJG95676.1;Name=WJG95676.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=PUW34_14075;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WJG95676.1;transl_table=11 CP118122.1 Genbank gene 2885038 2885946 . - . ID=gene-PUW34_14080;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=PUW34_14080 CP118122.1 Protein Homology CDS 2885038 2885946 . - 0 ID=cds-WJG95677.1;Parent=gene-PUW34_14080;Dbxref=NCBI_GP:WJG95677.1;Name=WJG95677.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576330.1;locus_tag=PUW34_14080;product=type III secretion system YopJ family effector AvrA;protein_id=WJG95677.1;transl_table=11 CP118122.1 Genbank gene 2886107 2886862 . - . ID=gene-PUW34_14085;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=PUW34_14085 CP118122.1 Protein Homology CDS 2886107 2886862 . - 0 ID=cds-WJG95678.1;Parent=gene-PUW34_14085;Dbxref=NCBI_GP:WJG95678.1;Name=WJG95678.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=PUW34_14085;product=transcriptional regulator SprB;protein_id=WJG95678.1;transl_table=11 CP118122.1 Genbank gene 2887247 2888134 . - . ID=gene-PUW34_14090;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=PUW34_14090 CP118122.1 Protein Homology CDS 2887247 2888134 . - 0 ID=cds-WJG95679.1;Parent=gene-PUW34_14090;Dbxref=NCBI_GP:WJG95679.1;Name=WJG95679.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=PUW34_14090;product=invasion transcriptional regulator HilC;protein_id=WJG95679.1;transl_table=11 CP118122.1 Genbank gene 2888479 2888931 . - . ID=gene-PUW34_14095;Name=PUW34_14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14095 CP118122.1 Protein Homology CDS 2888479 2888931 . - 0 ID=cds-WJG99004.1;Parent=gene-PUW34_14095;Dbxref=NCBI_GP:WJG99004.1;Name=WJG99004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=PUW34_14095;product=type III secretion system effector protein OrgC;protein_id=WJG99004.1;transl_table=11 CP118122.1 Genbank gene 2888928 2889608 . - . ID=gene-PUW34_14100;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=PUW34_14100 CP118122.1 Protein Homology CDS 2888928 2889608 . - 0 ID=cds-WJG95680.1;Parent=gene-PUW34_14100;Dbxref=NCBI_GP:WJG95680.1;Name=WJG95680.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=PUW34_14100;product=type III secretion system linker protein OrgB;protein_id=WJG95680.1;transl_table=11 CP118122.1 Genbank gene 2889565 2890164 . - . ID=gene-PUW34_14105;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=PUW34_14105 CP118122.1 Protein Homology CDS 2889565 2890164 . - 0 ID=cds-WJG95681.1;Parent=gene-PUW34_14105;Dbxref=NCBI_GP:WJG95681.1;Name=WJG95681.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=PUW34_14105;product=oxygen-regulated invasion protein OrgA;protein_id=WJG95681.1;transl_table=11 CP118122.1 Genbank gene 2890136 2890894 . - . ID=gene-PUW34_14110;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=PUW34_14110 CP118122.1 Protein Homology CDS 2890136 2890894 . - 0 ID=cds-WJG95682.1;Parent=gene-PUW34_14110;Dbxref=NCBI_GP:WJG95682.1;Name=WJG95682.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=PUW34_14110;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WJG95682.1;transl_table=11 CP118122.1 Genbank gene 2890891 2891196 . - . ID=gene-PUW34_14115;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=PUW34_14115 CP118122.1 Protein Homology CDS 2890891 2891196 . - 0 ID=cds-WJG95683.1;Parent=gene-PUW34_14115;Dbxref=NCBI_GP:WJG95683.1;Name=WJG95683.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=PUW34_14115;product=type III secretion system inner rod protein PrgJ;protein_id=WJG95683.1;transl_table=11 CP118122.1 Genbank gene 2891215 2891457 . - . ID=gene-PUW34_14120;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=PUW34_14120 CP118122.1 Protein Homology CDS 2891215 2891457 . - 0 ID=cds-WJG95684.1;Parent=gene-PUW34_14120;Dbxref=NCBI_GP:WJG95684.1;Name=WJG95684.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=PUW34_14120;product=type III secretion system needle filament protein PrgI;protein_id=WJG95684.1;transl_table=11 CP118122.1 Genbank gene 2891482 2892660 . - . ID=gene-PUW34_14125;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=PUW34_14125 CP118122.1 Protein Homology CDS 2891482 2892660 . - 0 ID=cds-WJG95685.1;Parent=gene-PUW34_14125;Dbxref=NCBI_GP:WJG95685.1;Name=WJG95685.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=PUW34_14125;product=type III secretion system inner membrane ring protein PrgH;protein_id=WJG95685.1;transl_table=11 CP118122.1 Genbank gene 2892974 2893903 . + . ID=gene-PUW34_14130;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=PUW34_14130 CP118122.1 Protein Homology CDS 2892974 2893903 . + 0 ID=cds-WJG95686.1;Parent=gene-PUW34_14130;Dbxref=NCBI_GP:WJG95686.1;Name=WJG95686.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=PUW34_14130;product=transcriptional regulator HilD;protein_id=WJG95686.1;transl_table=11 CP118122.1 Genbank gene 2894993 2896654 . + . ID=gene-PUW34_14135;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=PUW34_14135 CP118122.1 Protein Homology CDS 2894993 2896654 . + 0 ID=cds-WJG95687.1;Parent=gene-PUW34_14135;Dbxref=NCBI_GP:WJG95687.1;Name=WJG95687.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=PUW34_14135;product=transcriptional regulator HilA;protein_id=WJG95687.1;transl_table=11 CP118122.1 Genbank gene 2896672 2897154 . + . ID=gene-PUW34_14140;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=PUW34_14140 CP118122.1 Protein Homology CDS 2896672 2897154 . + 0 ID=cds-WJG95688.1;Parent=gene-PUW34_14140;Dbxref=NCBI_GP:WJG95688.1;Name=WJG95688.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=PUW34_14140;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WJG95688.1;transl_table=11 CP118122.1 Genbank pseudogene 2897208 2898838 . - . ID=gene-PUW34_14145;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=pseudogene;locus_tag=PUW34_14145;pseudo=true CP118122.1 Protein Homology CDS 2897208 2898838 . - 0 ID=cds-PUW34_14145;Parent=gene-PUW34_14145;Note=frameshifted;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540778.1;locus_tag=PUW34_14145;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2898825 2899217 . - . ID=gene-PUW34_14150;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=PUW34_14150 CP118122.1 Protein Homology CDS 2898825 2899217 . - 0 ID=cds-WJG95689.1;Parent=gene-PUW34_14150;Dbxref=NCBI_GP:WJG95689.1;Name=WJG95689.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=PUW34_14150;product=chaperone SicP;protein_id=WJG95689.1;transl_table=11 CP118122.1 Genbank gene 2899244 2899504 . - . ID=gene-PUW34_14155;Name=PUW34_14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14155 CP118122.1 Protein Homology CDS 2899244 2899504 . - 0 ID=cds-WJG95690.1;Parent=gene-PUW34_14155;Dbxref=NCBI_GP:WJG95690.1;Name=WJG95690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=PUW34_14155;product=hypothetical protein;protein_id=WJG95690.1;transl_table=11 CP118122.1 Genbank gene 2899548 2899796 . - . ID=gene-PUW34_14160;Name=PUW34_14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14160 CP118122.1 Protein Homology CDS 2899548 2899796 . - 0 ID=cds-WJG95691.1;Parent=gene-PUW34_14160;Dbxref=NCBI_GP:WJG95691.1;Name=WJG95691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=PUW34_14160;product=acyl carrier protein;protein_id=WJG95691.1;transl_table=11 CP118122.1 Genbank pseudogene 2899815 2901871 . - . ID=gene-PUW34_14165;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=pseudogene;locus_tag=PUW34_14165;pseudo=true CP118122.1 Protein Homology CDS 2899815 2901871 . - 0 ID=cds-PUW34_14165;Parent=gene-PUW34_14165;Note=frameshifted;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=PUW34_14165;product=SPI-1 type III secretion system effector SipA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2901890 2902921 . - . ID=gene-PUW34_14170;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=PUW34_14170 CP118122.1 Protein Homology CDS 2901890 2902921 . - 0 ID=cds-WJG95692.1;Parent=gene-PUW34_14170;Dbxref=NCBI_GP:WJG95692.1;Name=WJG95692.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=PUW34_14170;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WJG95692.1;transl_table=11 CP118122.1 Genbank pseudogene 2902992 2904220 . - . ID=gene-PUW34_14175;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=pseudogene;locus_tag=PUW34_14175;pseudo=true CP118122.1 Protein Homology CDS 2902992 2904220 . - 0 ID=cds-PUW34_14175;Parent=gene-PUW34_14175;Note=frameshifted;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=PUW34_14175;product=SPI-1 type III secretion system needle tip complex protein SipC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2904248 2906029 . - . ID=gene-PUW34_14180;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=PUW34_14180 CP118122.1 Protein Homology CDS 2904248 2906029 . - 0 ID=cds-WJG95693.1;Parent=gene-PUW34_14180;Dbxref=NCBI_GP:WJG95693.1;Name=WJG95693.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=PUW34_14180;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WJG95693.1;transl_table=11 CP118122.1 Genbank gene 2906032 2906529 . - . ID=gene-PUW34_14185;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=PUW34_14185 CP118122.1 Protein Homology CDS 2906032 2906529 . - 0 ID=cds-WJG95694.1;Parent=gene-PUW34_14185;Dbxref=NCBI_GP:WJG95694.1;Name=WJG95694.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=PUW34_14185;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WJG95694.1;transl_table=11 CP118122.1 Genbank pseudogene 2906667 2907736 . - . ID=gene-PUW34_14190;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=pseudogene;locus_tag=PUW34_14190;pseudo=true CP118122.1 Protein Homology CDS 2906667 2907736 . - 0 ID=cds-PUW34_14190;Parent=gene-PUW34_14190;Note=frameshifted;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=PUW34_14190;product=SPI-1 type III secretion system export apparatus protein SpaS;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2907723 2908514 . - . ID=gene-PUW34_14195;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=PUW34_14195 CP118122.1 Protein Homology CDS 2907723 2908514 . - 0 ID=cds-WJG95695.1;Parent=gene-PUW34_14195;Dbxref=NCBI_GP:WJG95695.1;Name=WJG95695.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=PUW34_14195;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WJG95695.1;transl_table=11 CP118122.1 Genbank gene 2908518 2908778 . - . ID=gene-PUW34_14200;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=PUW34_14200 CP118122.1 Protein Homology CDS 2908518 2908778 . - 0 ID=cds-WJG95696.1;Parent=gene-PUW34_14200;Dbxref=NCBI_GP:WJG95696.1;Name=WJG95696.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=PUW34_14200;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WJG95696.1;transl_table=11 CP118122.1 Genbank gene 2908804 2909478 . - . ID=gene-PUW34_14205;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=PUW34_14205 CP118122.1 Protein Homology CDS 2908804 2909478 . - 0 ID=cds-WJG95697.1;Parent=gene-PUW34_14205;Dbxref=NCBI_GP:WJG95697.1;Name=WJG95697.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=PUW34_14205;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WJG95697.1;transl_table=11 CP118122.1 Genbank gene 2909468 2910379 . - . ID=gene-PUW34_14210;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=PUW34_14210 CP118122.1 Protein Homology CDS 2909468 2910379 . - 0 ID=cds-WJG95698.1;Parent=gene-PUW34_14210;Dbxref=NCBI_GP:WJG95698.1;Name=WJG95698.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=PUW34_14210;product=SPI-1 type III secretion system protein SpaO;protein_id=WJG95698.1;transl_table=11 CP118122.1 Genbank gene 2910379 2911389 . - . ID=gene-PUW34_14215;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=PUW34_14215 CP118122.1 Protein Homology CDS 2910379 2911389 . - 0 ID=cds-WJG95699.1;Parent=gene-PUW34_14215;Dbxref=NCBI_GP:WJG95699.1;Name=WJG95699.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=PUW34_14215;product=SPI-1 type III secretion system protein SpaN;protein_id=WJG95699.1;transl_table=11 CP118122.1 Genbank gene 2911389 2911832 . - . ID=gene-PUW34_14220;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=PUW34_14220 CP118122.1 Protein Homology CDS 2911389 2911832 . - 0 ID=cds-WJG95700.1;Parent=gene-PUW34_14220;Dbxref=NCBI_GP:WJG95700.1;Name=WJG95700.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=PUW34_14220;product=SPI-1 type III secretion system protein SpaM;protein_id=WJG95700.1;transl_table=11 CP118122.1 Genbank gene 2911810 2913105 . - . ID=gene-PUW34_14225;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=PUW34_14225 CP118122.1 Protein Homology CDS 2911810 2913105 . - 0 ID=cds-WJG95701.1;Parent=gene-PUW34_14225;Dbxref=NCBI_GP:WJG95701.1;Name=WJG95701.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=PUW34_14225;product=SctN family type III secretion system ATPase InvC;protein_id=WJG95701.1;transl_table=11 CP118122.1 Genbank pseudogene 2913102 2913508 . - . ID=gene-PUW34_14230;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=pseudogene;locus_tag=PUW34_14230;pseudo=true CP118122.1 Protein Homology CDS 2913102 2913508 . - 0 ID=cds-PUW34_14230;Parent=gene-PUW34_14230;Note=frameshifted;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=PUW34_14230;product=SPI-1 type III secretion system chaperone SpaK;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2913532 2915589 . - . ID=gene-PUW34_14235;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=PUW34_14235 CP118122.1 Protein Homology CDS 2913532 2915589 . - 0 ID=cds-WJG95702.1;Parent=gene-PUW34_14235;Dbxref=NCBI_GP:WJG95702.1;Name=WJG95702.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=PUW34_14235;product=type III secretion system export apparatus protein InvA;protein_id=WJG95702.1;transl_table=11 CP118122.1 Genbank gene 2915614 2916732 . - . ID=gene-PUW34_14240;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=PUW34_14240 CP118122.1 Protein Homology CDS 2915614 2916732 . - 0 ID=cds-WJG95703.1;Parent=gene-PUW34_14240;Dbxref=NCBI_GP:WJG95703.1;Name=WJG95703.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=PUW34_14240;product=type III secretion system gatekeeper InvE;protein_id=WJG95703.1;transl_table=11 CP118122.1 Genbank gene 2916729 2918417 . - . ID=gene-PUW34_14245;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=PUW34_14245 CP118122.1 Protein Homology CDS 2916729 2918417 . - 0 ID=cds-WJG95704.1;Parent=gene-PUW34_14245;Dbxref=NCBI_GP:WJG95704.1;Name=WJG95704.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=PUW34_14245;product=type III secretion system outer membrane ring protein InvG;protein_id=WJG95704.1;transl_table=11 CP118122.1 Genbank pseudogene 2918414 2919063 . - . ID=gene-PUW34_14250;Name=invF;gbkey=Gene;gene=invF;gene_biotype=pseudogene;locus_tag=PUW34_14250;pseudo=true CP118122.1 Protein Homology CDS 2918414 2919063 . - 0 ID=cds-PUW34_14250;Parent=gene-PUW34_14250;Note=frameshifted;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=PUW34_14250;product=type III secretion system transcriptional activator InvF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2919519 2919962 . + . ID=gene-PUW34_14255;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=PUW34_14255 CP118122.1 Protein Homology CDS 2919519 2919962 . + 0 ID=cds-WJG95705.1;Parent=gene-PUW34_14255;Dbxref=NCBI_GP:WJG95705.1;Name=WJG95705.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=PUW34_14255;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WJG95705.1;transl_table=11 CP118122.1 Genbank pseudogene 2920366 2920555 . + . ID=gene-PUW34_14260;Name=PUW34_14260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_14260;pseudo=true CP118122.1 Protein Homology CDS 2920366 2920555 . + 0 ID=cds-PUW34_14260;Parent=gene-PUW34_14260;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=PUW34_14260;product=IS3 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2920825 2921115 . + . ID=gene-PUW34_14265;Name=PUW34_14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14265 CP118122.1 Protein Homology CDS 2920825 2921115 . + 0 ID=cds-WJG95706.1;Parent=gene-PUW34_14265;Dbxref=NCBI_GP:WJG95706.1;Name=WJG95706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=PUW34_14265;product=DUF1778 domain-containing protein;protein_id=WJG95706.1;transl_table=11 CP118122.1 Genbank gene 2921112 2921639 . + . ID=gene-PUW34_14270;Name=PUW34_14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14270 CP118122.1 Protein Homology CDS 2921112 2921639 . + 0 ID=cds-WJG95707.1;Parent=gene-PUW34_14270;Dbxref=NCBI_GP:WJG95707.1;Name=WJG95707.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=PUW34_14270;product=GNAT family N-acetyltransferase;protein_id=WJG95707.1;transl_table=11 CP118122.1 Genbank pseudogene 2921712 2921917 . - . ID=gene-PUW34_14275;Name=PUW34_14275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_14275;pseudo=true CP118122.1 Protein Homology CDS 2921712 2921917 . - 0 ID=cds-PUW34_14275;Parent=gene-PUW34_14275;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=PUW34_14275;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2922276 2922932 . + . ID=gene-PUW34_14280;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=PUW34_14280 CP118122.1 Protein Homology CDS 2922276 2922932 . + 0 ID=cds-WJG95708.1;Parent=gene-PUW34_14280;Dbxref=NCBI_GP:WJG95708.1;Name=WJG95708.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=PUW34_14280;product=protein-serine/threonine phosphatase;protein_id=WJG95708.1;transl_table=11 CP118122.1 Genbank gene 2923177 2923671 . - . ID=gene-PUW34_14285;Name=PUW34_14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14285 CP118122.1 Protein Homology CDS 2923177 2923671 . - 0 ID=cds-WJG95709.1;Parent=gene-PUW34_14285;Dbxref=NCBI_GP:WJG95709.1;Name=WJG95709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424949.1;locus_tag=PUW34_14285;product=hypothetical protein;protein_id=WJG95709.1;transl_table=11 CP118122.1 Genbank gene 2923698 2924366 . - . ID=gene-PUW34_14290;Name=PUW34_14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14290 CP118122.1 Protein Homology CDS 2923698 2924366 . - 0 ID=cds-WJG95710.1;Parent=gene-PUW34_14290;Dbxref=NCBI_GP:WJG95710.1;Name=WJG95710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445913.1;locus_tag=PUW34_14290;product=hypothetical protein;protein_id=WJG95710.1;transl_table=11 CP118122.1 Genbank pseudogene 2924952 2925350 . - . ID=gene-PUW34_14295;Name=PUW34_14295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_14295;pseudo=true CP118122.1 Protein Homology CDS 2924952 2925350 . - 0 ID=cds-PUW34_14295;Parent=gene-PUW34_14295;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=PUW34_14295;product=cytoplasmic protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2925509 2928076 . + . ID=gene-PUW34_14300;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=PUW34_14300 CP118122.1 Protein Homology CDS 2925509 2928076 . + 0 ID=cds-WJG95711.1;Parent=gene-PUW34_14300;Dbxref=NCBI_GP:WJG95711.1;Name=WJG95711.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=PUW34_14300;product=DNA mismatch repair protein MutS;protein_id=WJG95711.1;transl_table=11 CP118122.1 Genbank gene 2928119 2928499 . - . ID=gene-PUW34_14305;Name=PUW34_14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14305 CP118122.1 Protein Homology CDS 2928119 2928499 . - 0 ID=cds-WJG95712.1;Parent=gene-PUW34_14305;Dbxref=NCBI_GP:WJG95712.1;Name=WJG95712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=PUW34_14305;product=DUF4440 domain-containing protein;protein_id=WJG95712.1;transl_table=11 CP118122.1 Genbank gene 2928496 2929704 . - . ID=gene-PUW34_14310;Name=PUW34_14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14310 CP118122.1 Protein Homology CDS 2928496 2929704 . - 0 ID=cds-WJG95713.1;Parent=gene-PUW34_14310;Dbxref=NCBI_GP:WJG95713.1;Name=WJG95713.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222390.1;locus_tag=PUW34_14310;product=MFS transporter;protein_id=WJG95713.1;transl_table=11 CP118122.1 Genbank gene 2929792 2930724 . + . ID=gene-PUW34_14315;Name=PUW34_14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14315 CP118122.1 Protein Homology CDS 2929792 2930724 . + 0 ID=cds-WJG95714.1;Parent=gene-PUW34_14315;Dbxref=NCBI_GP:WJG95714.1;Name=WJG95714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=PUW34_14315;product=LysR substrate-binding domain-containing protein;protein_id=WJG95714.1;transl_table=11 CP118122.1 Genbank gene 2930766 2932262 . - . ID=gene-PUW34_14320;Name=PUW34_14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14320 CP118122.1 Protein Homology CDS 2930766 2932262 . - 0 ID=cds-WJG95715.1;Parent=gene-PUW34_14320;Dbxref=NCBI_GP:WJG95715.1;Name=WJG95715.1;Ontology_term=GO:0015718,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=solute:proton symporter activity|0015295||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=PUW34_14320;product=gluconate:H+ symporter;protein_id=WJG95715.1;transl_table=11 CP118122.1 Genbank gene 2932259 2933209 . - . ID=gene-PUW34_14325;Name=PUW34_14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14325 CP118122.1 Protein Homology CDS 2932259 2933209 . - 0 ID=cds-WJG95716.1;Parent=gene-PUW34_14325;Dbxref=NCBI_GP:WJG95716.1;Name=WJG95716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=PUW34_14325;product=SDR family oxidoreductase;protein_id=WJG95716.1;transl_table=11 CP118122.1 Genbank gene 2933249 2934025 . - . ID=gene-PUW34_14330;Name=PUW34_14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14330 CP118122.1 Protein Homology CDS 2933249 2934025 . - 0 ID=cds-WJG95717.1;Parent=gene-PUW34_14330;Dbxref=NCBI_GP:WJG95717.1;Name=WJG95717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=PUW34_14330;product=HPr family phosphocarrier protein;protein_id=WJG95717.1;transl_table=11 CP118122.1 Genbank gene 2934030 2934668 . - . ID=gene-PUW34_14335;Name=PUW34_14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14335 CP118122.1 Protein Homology CDS 2934030 2934668 . - 0 ID=cds-WJG95718.1;Parent=gene-PUW34_14335;Dbxref=NCBI_GP:WJG95718.1;Name=WJG95718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=PUW34_14335;product=aldolase;protein_id=WJG95718.1;transl_table=11 CP118122.1 Genbank gene 2934665 2935927 . - . ID=gene-PUW34_14340;Name=PUW34_14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14340 CP118122.1 Protein Homology CDS 2934665 2935927 . - 0 ID=cds-WJG95719.1;Parent=gene-PUW34_14340;Dbxref=NCBI_GP:WJG95719.1;Name=WJG95719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=PUW34_14340;product=3-oxo-tetronate kinase;protein_id=WJG95719.1;transl_table=11 CP118122.1 Genbank gene 2935921 2936844 . - . ID=gene-PUW34_14345;Name=PUW34_14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14345 CP118122.1 Protein Homology CDS 2935921 2936844 . - 0 ID=cds-WJG95720.1;Parent=gene-PUW34_14345;Dbxref=NCBI_GP:WJG95720.1;Name=WJG95720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=PUW34_14345;product=NAD(P)-dependent oxidoreductase;protein_id=WJG95720.1;transl_table=11 CP118122.1 Genbank gene 2937041 2937805 . + . ID=gene-PUW34_14350;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=PUW34_14350 CP118122.1 Protein Homology CDS 2937041 2937805 . + 0 ID=cds-WJG95721.1;Parent=gene-PUW34_14350;Dbxref=NCBI_GP:WJG95721.1;Name=WJG95721.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=PUW34_14350;product=DNA-binding transcriptional repressor YgbI;protein_id=WJG95721.1;transl_table=11 CP118122.1 Genbank gene 2937824 2938228 . - . ID=gene-PUW34_14355;Name=PUW34_14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14355 CP118122.1 Protein Homology CDS 2937824 2938228 . - 0 ID=cds-WJG95722.1;Parent=gene-PUW34_14355;Dbxref=NCBI_GP:WJG95722.1;Name=WJG95722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=PUW34_14355;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WJG95722.1;transl_table=11 CP118122.1 Genbank gene 2938399 2938992 . + . ID=gene-PUW34_14360;Name=PUW34_14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14360 CP118122.1 Protein Homology CDS 2938399 2938992 . + 0 ID=cds-WJG95723.1;Parent=gene-PUW34_14360;Dbxref=NCBI_GP:WJG95723.1;Name=WJG95723.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=PUW34_14360;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WJG95723.1;transl_table=11 CP118122.1 Genbank gene 2938992 2940419 . + . ID=gene-PUW34_14365;Name=PUW34_14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14365 CP118122.1 Protein Homology CDS 2938992 2940419 . + 0 ID=cds-WJG95724.1;Parent=gene-PUW34_14365;Dbxref=NCBI_GP:WJG95724.1;Name=WJG95724.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=PUW34_14365;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WJG95724.1;transl_table=11 CP118122.1 Genbank gene 2940430 2940666 . + . ID=gene-PUW34_14370;Name=PUW34_14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14370 CP118122.1 Protein Homology CDS 2940430 2940666 . + 0 ID=cds-WJG95725.1;Parent=gene-PUW34_14370;Dbxref=NCBI_GP:WJG95725.1;Name=WJG95725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=PUW34_14370;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WJG95725.1;transl_table=11 CP118122.1 Genbank gene 2940711 2941703 . - . ID=gene-PUW34_14375;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=PUW34_14375 CP118122.1 Protein Homology CDS 2940711 2941703 . - 0 ID=cds-WJG95726.1;Parent=gene-PUW34_14375;Dbxref=NCBI_GP:WJG95726.1;Name=WJG95726.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=PUW34_14375;product=RNA polymerase sigma factor RpoS;protein_id=WJG95726.1;transl_table=11 CP118122.1 Genbank gene 2941766 2942848 . - . ID=gene-PUW34_14380;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=PUW34_14380 CP118122.1 Protein Homology CDS 2941766 2942848 . - 0 ID=cds-WJG99005.1;Parent=gene-PUW34_14380;Dbxref=NCBI_GP:WJG99005.1;Name=WJG99005.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=PUW34_14380;product=murein hydrolase activator NlpD;protein_id=WJG99005.1;transl_table=11 CP118122.1 Genbank gene 2942778 2942936 . + . ID=gene-PUW34_14385;Name=PUW34_14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14385 CP118122.1 Protein Homology CDS 2942778 2942936 . + 0 ID=cds-WJG99006.1;Parent=gene-PUW34_14385;Dbxref=NCBI_GP:WJG99006.1;Name=WJG99006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=PUW34_14385;product=peptidase;protein_id=WJG99006.1;transl_table=11 CP118122.1 Genbank gene 2943075 2943701 . - . ID=gene-PUW34_14390;Name=PUW34_14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14390 CP118122.1 Protein Homology CDS 2943075 2943701 . - 0 ID=cds-WJG95727.1;Parent=gene-PUW34_14390;Dbxref=NCBI_GP:WJG95727.1;Name=WJG95727.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=PUW34_14390;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WJG95727.1;transl_table=11 CP118122.1 Genbank gene 2943695 2944456 . - . ID=gene-PUW34_14395;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=PUW34_14395 CP118122.1 Protein Homology CDS 2943695 2944456 . - 0 ID=cds-WJG95728.1;Parent=gene-PUW34_14395;Dbxref=NCBI_GP:WJG95728.1;Name=WJG95728.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=PUW34_14395;product=5'/3'-nucleotidase SurE;protein_id=WJG95728.1;transl_table=11 CP118122.1 Genbank pseudogene 2944437 2945485 . - . ID=gene-PUW34_14400;Name=truD;gbkey=Gene;gene=truD;gene_biotype=pseudogene;locus_tag=PUW34_14400;pseudo=true CP118122.1 Protein Homology CDS 2944437 2945485 . - 0 ID=cds-PUW34_14400;Parent=gene-PUW34_14400;Note=frameshifted;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=PUW34_14400;product=tRNA pseudouridine(13) synthase TruD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2945482 2945961 . - . ID=gene-PUW34_14405;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=PUW34_14405 CP118122.1 Protein Homology CDS 2945482 2945961 . - 0 ID=cds-WJG95729.1;Parent=gene-PUW34_14405;Dbxref=NCBI_GP:WJG95729.1;Name=WJG95729.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=PUW34_14405;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WJG95729.1;transl_table=11 CP118122.1 Genbank gene 2945961 2946671 . - . ID=gene-PUW34_14410;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=PUW34_14410 CP118122.1 Protein Homology CDS 2945961 2946671 . - 0 ID=cds-WJG95730.1;Parent=gene-PUW34_14410;Dbxref=NCBI_GP:WJG95730.1;Name=WJG95730.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=PUW34_14410;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WJG95730.1;transl_table=11 CP118122.1 Genbank gene 2946690 2947001 . - . ID=gene-PUW34_14415;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=PUW34_14415 CP118122.1 Protein Homology CDS 2946690 2947001 . - 0 ID=cds-WJG95731.1;Parent=gene-PUW34_14415;Dbxref=NCBI_GP:WJG95731.1;Name=WJG95731.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=PUW34_14415;product=cell division protein FtsB;protein_id=WJG95731.1;transl_table=11 CP118122.1 Genbank gene 2947192 2947515 . - . ID=gene-PUW34_14420;Name=PUW34_14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14420 CP118122.1 Protein Homology CDS 2947192 2947515 . - 0 ID=cds-WJG95732.1;Parent=gene-PUW34_14420;Dbxref=NCBI_GP:WJG95732.1;Name=WJG95732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=PUW34_14420;product=DUF3561 family protein;protein_id=WJG95732.1;transl_table=11 CP118122.1 Genbank gene 2947566 2948171 . - . ID=gene-PUW34_14425;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=PUW34_14425 CP118122.1 Protein Homology CDS 2947566 2948171 . - 0 ID=cds-WJG95733.1;Parent=gene-PUW34_14425;Dbxref=NCBI_GP:WJG95733.1;Name=WJG95733.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=PUW34_14425;product=adenylyl-sulfate kinase;protein_id=WJG95733.1;transl_table=11 CP118122.1 Genbank gene 2948158 2949597 . - . ID=gene-PUW34_14430;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=PUW34_14430 CP118122.1 Protein Homology CDS 2948158 2949597 . - 0 ID=cds-WJG95734.1;Parent=gene-PUW34_14430;Dbxref=NCBI_GP:WJG95734.1;Name=WJG95734.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=PUW34_14430;product=sulfate adenylyltransferase subunit CysN;protein_id=WJG95734.1;transl_table=11 CP118122.1 Genbank gene 2949607 2950515 . - . ID=gene-PUW34_14435;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=PUW34_14435 CP118122.1 Protein Homology CDS 2949607 2950515 . - 0 ID=cds-WJG95735.1;Parent=gene-PUW34_14435;Dbxref=NCBI_GP:WJG95735.1;Name=WJG95735.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=PUW34_14435;product=sulfate adenylyltransferase subunit CysD;protein_id=WJG95735.1;transl_table=11 CP118122.1 Genbank gene 2950766 2951812 . + . ID=gene-PUW34_14440;Name=PUW34_14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14440 CP118122.1 Protein Homology CDS 2950766 2951812 . + 0 ID=cds-WJG95736.1;Parent=gene-PUW34_14440;Dbxref=NCBI_GP:WJG95736.1;Name=WJG95736.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=PUW34_14440;product=aminopeptidase;protein_id=WJG95736.1;transl_table=11 CP118122.1 Genbank gene 2952075 2952368 . - . ID=gene-PUW34_14445;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=PUW34_14445 CP118122.1 Protein Homology CDS 2952075 2952368 . - 0 ID=cds-WJG95737.1;Parent=gene-PUW34_14445;Dbxref=NCBI_GP:WJG95737.1;Name=WJG95737.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=PUW34_14445;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WJG95737.1;transl_table=11 CP118122.1 Genbank pseudogene 2952368 2953287 . - . ID=gene-PUW34_14450;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=pseudogene;locus_tag=PUW34_14450;pseudo=true CP118122.1 Protein Homology CDS 2952368 2953287 . - 0 ID=cds-PUW34_14450;Parent=gene-PUW34_14450;Note=frameshifted;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=PUW34_14450;product=type I-E CRISPR-associated endonuclease Cas1e;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2953284 2953934 . - . ID=gene-PUW34_14455;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=PUW34_14455 CP118122.1 Protein Homology CDS 2953284 2953934 . - 0 ID=cds-WJG95738.1;Parent=gene-PUW34_14455;Dbxref=NCBI_GP:WJG95738.1;Name=WJG95738.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas6e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=PUW34_14455;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WJG95738.1;transl_table=11 CP118122.1 Genbank gene 2953916 2954662 . - . ID=gene-PUW34_14460;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=PUW34_14460 CP118122.1 Protein Homology CDS 2953916 2954662 . - 0 ID=cds-WJG95739.1;Parent=gene-PUW34_14460;Dbxref=NCBI_GP:WJG95739.1;Name=WJG95739.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas5e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=PUW34_14460;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WJG95739.1;transl_table=11 CP118122.1 Genbank gene 2954673 2955731 . - . ID=gene-PUW34_14465;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=PUW34_14465 CP118122.1 Protein Homology CDS 2954673 2955731 . - 0 ID=cds-WJG95740.1;Parent=gene-PUW34_14465;Dbxref=NCBI_GP:WJG95740.1;Name=WJG95740.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=PUW34_14465;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WJG95740.1;transl_table=11 CP118122.1 Genbank gene 2955745 2956299 . - . ID=gene-PUW34_14470;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=PUW34_14470 CP118122.1 Protein Homology CDS 2955745 2956299 . - 0 ID=cds-WJG95741.1;Parent=gene-PUW34_14470;Dbxref=NCBI_GP:WJG95741.1;Name=WJG95741.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casB;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=PUW34_14470;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WJG95741.1;transl_table=11 CP118122.1 Genbank gene 2956296 2957852 . - . ID=gene-PUW34_14475;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=PUW34_14475 CP118122.1 Protein Homology CDS 2956296 2957852 . - 0 ID=cds-WJG95742.1;Parent=gene-PUW34_14475;Dbxref=NCBI_GP:WJG95742.1;Name=WJG95742.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=PUW34_14475;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WJG95742.1;transl_table=11 CP118122.1 Genbank pseudogene 2957864 2960527 . - . ID=gene-PUW34_14480;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=pseudogene;locus_tag=PUW34_14480;pseudo=true CP118122.1 Protein Homology CDS 2957864 2960527 . - 0 ID=cds-PUW34_14480;Parent=gene-PUW34_14480;Note=internal stop;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=PUW34_14480;product=CRISPR-associated helicase Cas3';pseudo=true;transl_table=11 CP118122.1 Genbank gene 2960972 2961925 . + . ID=gene-PUW34_14485;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=PUW34_14485 CP118122.1 Protein Homology CDS 2960972 2961925 . + 0 ID=cds-WJG95743.1;Parent=gene-PUW34_14485;Dbxref=NCBI_GP:WJG95743.1;Name=WJG95743.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=PUW34_14485;product=SPI-1 type III secretion system effector SopD;protein_id=WJG95743.1;transl_table=11 CP118122.1 Genbank gene 2962013 2962747 . - . ID=gene-PUW34_14490;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=PUW34_14490 CP118122.1 Protein Homology CDS 2962013 2962747 . - 0 ID=cds-WJG95744.1;Parent=gene-PUW34_14490;Dbxref=NCBI_GP:WJG95744.1;Name=WJG95744.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=PUW34_14490;product=phosphoadenosine phosphosulfate reductase;protein_id=WJG95744.1;transl_table=11 CP118122.1 Genbank pseudogene 2962849 2964560 . - . ID=gene-PUW34_14495;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=pseudogene;locus_tag=PUW34_14495;pseudo=true CP118122.1 Protein Homology CDS 2962849 2964560 . - 0 ID=cds-PUW34_14495;Parent=gene-PUW34_14495;Note=frameshifted;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=PUW34_14495;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2964560 2966358 . - . ID=gene-PUW34_14500;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=pseudogene;locus_tag=PUW34_14500;pseudo=true CP118122.1 Protein Homology CDS 2964560 2966358 . - 0 ID=cds-PUW34_14500;Parent=gene-PUW34_14500;Note=frameshifted;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=PUW34_14500;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2966782 2967144 . + . ID=gene-PUW34_14505;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=PUW34_14505 CP118122.1 Protein Homology CDS 2966782 2967144 . + 0 ID=cds-WJG95745.1;Parent=gene-PUW34_14505;Dbxref=NCBI_GP:WJG95745.1;Name=WJG95745.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=PUW34_14505;product=6-carboxytetrahydropterin synthase QueD;protein_id=WJG95745.1;transl_table=11 CP118122.1 Genbank gene 2967232 2968029 . - . ID=gene-PUW34_14510;Name=PUW34_14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14510 CP118122.1 Protein Homology CDS 2967232 2968029 . - 0 ID=cds-WJG95746.1;Parent=gene-PUW34_14510;Dbxref=NCBI_GP:WJG95746.1;Name=WJG95746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=PUW34_14510;product=MBL fold metallo-hydrolase;protein_id=WJG95746.1;transl_table=11 CP118122.1 Genbank direct_repeat 2968129 2968765 . + . ID=id-CP118122.1:2968129..2968765;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=2968190..2968216;rpt_unit_seq=gtttatccccgctggcgcggggaacac CP118122.1 Genbank gene 2969062 2969733 . - . ID=gene-PUW34_14515;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=PUW34_14515 CP118122.1 Protein Homology CDS 2969062 2969733 . - 0 ID=cds-WJG95747.1;Parent=gene-PUW34_14515;Dbxref=NCBI_GP:WJG95747.1;Name=WJG95747.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=PUW34_14515;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WJG95747.1;transl_table=11 CP118122.1 Genbank gene 2969869 2971167 . - . ID=gene-PUW34_14520;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=PUW34_14520 CP118122.1 Protein Homology CDS 2969869 2971167 . - 0 ID=cds-WJG95748.1;Parent=gene-PUW34_14520;Dbxref=NCBI_GP:WJG95748.1;Name=WJG95748.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=PUW34_14520;product=phosphopyruvate hydratase;protein_id=WJG95748.1;transl_table=11 CP118122.1 Genbank gene 2971250 2972887 . - . ID=gene-PUW34_14525;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=PUW34_14525 CP118122.1 Protein Homology CDS 2971250 2972887 . - 0 ID=cds-WJG95749.1;Parent=gene-PUW34_14525;Dbxref=NCBI_GP:WJG95749.1;Name=WJG95749.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=PUW34_14525;product=CTP synthase (glutamine hydrolyzing);protein_id=WJG95749.1;transl_table=11 CP118122.1 Genbank gene 2973115 2973915 . - . ID=gene-PUW34_14530;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=PUW34_14530 CP118122.1 Protein Homology CDS 2973115 2973915 . - 0 ID=cds-WJG95750.1;Parent=gene-PUW34_14530;Dbxref=NCBI_GP:WJG95750.1;Name=WJG95750.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=PUW34_14530;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WJG95750.1;transl_table=11 CP118122.1 Genbank gene 2974524 2975111 . + . ID=gene-PUW34_14535;Name=PUW34_14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14535 CP118122.1 Protein Homology CDS 2974524 2975111 . + 0 ID=cds-WJG95751.1;Parent=gene-PUW34_14535;Dbxref=NCBI_GP:WJG95751.1;Name=WJG95751.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=PUW34_14535;product=fimbrial protein;protein_id=WJG95751.1;transl_table=11 CP118122.1 Genbank gene 2975245 2977596 . + . ID=gene-PUW34_14540;Name=PUW34_14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14540 CP118122.1 Protein Homology CDS 2975245 2977596 . + 0 ID=cds-WJG95752.1;Parent=gene-PUW34_14540;Dbxref=NCBI_GP:WJG95752.1;Name=WJG95752.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011804.0;locus_tag=PUW34_14540;product=fimbrial biogenesis outer membrane usher protein;protein_id=WJG95752.1;transl_table=11 CP118122.1 Genbank gene 2977560 2977889 . + . ID=gene-PUW34_14545;Name=PUW34_14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14545 CP118122.1 GeneMarkS-2+ CDS 2977560 2977889 . + 0 ID=cds-WJG95753.1;Parent=gene-PUW34_14545;Dbxref=NCBI_GP:WJG95753.1;Name=WJG95753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_14545;product=hypothetical protein;protein_id=WJG95753.1;transl_table=11 CP118122.1 Genbank gene 2977902 2978675 . + . ID=gene-PUW34_14550;Name=PUW34_14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14550 CP118122.1 Protein Homology CDS 2977902 2978675 . + 0 ID=cds-WJG95754.1;Parent=gene-PUW34_14550;Dbxref=NCBI_GP:WJG95754.1;Name=WJG95754.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=PUW34_14550;product=fimbria/pilus periplasmic chaperone;protein_id=WJG95754.1;transl_table=11 CP118122.1 Genbank gene 2978695 2979198 . + . ID=gene-PUW34_14555;Name=PUW34_14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14555 CP118122.1 Protein Homology CDS 2978695 2979198 . + 0 ID=cds-WJG95755.1;Parent=gene-PUW34_14555;Dbxref=NCBI_GP:WJG95755.1;Name=WJG95755.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=PUW34_14555;product=fimbrial protein;protein_id=WJG95755.1;transl_table=11 CP118122.1 Genbank gene 2979213 2979683 . + . ID=gene-PUW34_14560;Name=PUW34_14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14560 CP118122.1 Protein Homology CDS 2979213 2979683 . + 0 ID=cds-WJG95756.1;Parent=gene-PUW34_14560;Dbxref=NCBI_GP:WJG95756.1;Name=WJG95756.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=PUW34_14560;product=fimbrial protein;protein_id=WJG95756.1;transl_table=11 CP118122.1 Genbank gene 2979680 2980216 . + . ID=gene-PUW34_14565;Name=PUW34_14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14565 CP118122.1 Protein Homology CDS 2979680 2980216 . + 0 ID=cds-WJG95757.1;Parent=gene-PUW34_14565;Dbxref=NCBI_GP:WJG95757.1;Name=WJG95757.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=PUW34_14565;product=fimbrial protein;protein_id=WJG95757.1;transl_table=11 CP118122.1 Genbank gene 2980271 2981302 . + . ID=gene-PUW34_14570;Name=PUW34_14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14570 CP118122.1 Protein Homology CDS 2980271 2981302 . + 0 ID=cds-WJG95758.1;Parent=gene-PUW34_14570;Dbxref=NCBI_GP:WJG95758.1;Name=WJG95758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750138.1;locus_tag=PUW34_14570;product=hypothetical protein;protein_id=WJG95758.1;transl_table=11 CP118122.1 Genbank gene 2981652 2983886 . - . ID=gene-PUW34_14575;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=PUW34_14575 CP118122.1 Protein Homology CDS 2981652 2983886 . - 0 ID=cds-WJG95759.1;Parent=gene-PUW34_14575;Dbxref=NCBI_GP:WJG95759.1;Name=WJG95759.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=PUW34_14575;product=GTP diphosphokinase;protein_id=WJG95759.1;transl_table=11 CP118122.1 Genbank gene 2983938 2985233 . - . ID=gene-PUW34_14580;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=PUW34_14580 CP118122.1 Protein Homology CDS 2983938 2985233 . - 0 ID=cds-WJG95760.1;Parent=gene-PUW34_14580;Dbxref=NCBI_GP:WJG95760.1;Name=WJG95760.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=PUW34_14580;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WJG95760.1;transl_table=11 CP118122.1 Genbank gene 2985291 2988047 . + . ID=gene-PUW34_14585;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=PUW34_14585 CP118122.1 Protein Homology CDS 2985291 2988047 . + 0 ID=cds-WJG95761.1;Parent=gene-PUW34_14585;Dbxref=NCBI_GP:WJG95761.1;Name=WJG95761.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=PUW34_14585;product=two-component sensor histidine kinase BarA;protein_id=WJG95761.1;transl_table=11 CP118122.1 Genbank pseudogene 2988091 2989232 . - . ID=gene-PUW34_14590;Name=PUW34_14590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_14590;pseudo=true CP118122.1 Protein Homology CDS 2988091 2989232 . - 0 ID=cds-PUW34_14590;Parent=gene-PUW34_14590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=PUW34_14590;product=glycerate kinase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2989310 2990650 . - . ID=gene-PUW34_14595;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=pseudogene;locus_tag=PUW34_14595;pseudo=true CP118122.1 Protein Homology CDS 2989310 2990650 . - 0 ID=cds-PUW34_14595;Parent=gene-PUW34_14595;Note=internal stop;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=PUW34_14595;product=glucarate dehydratase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 2990671 2992012 . - . ID=gene-PUW34_14600;Name=PUW34_14600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_14600;pseudo=true CP118122.1 Protein Homology CDS 2990671 2992012 . - 0 ID=cds-PUW34_14600;Parent=gene-PUW34_14600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=PUW34_14600;product=enolase C-terminal domain-like protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 2992009 2993367 . - . ID=gene-PUW34_14605;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=PUW34_14605 CP118122.1 Protein Homology CDS 2992009 2993367 . - 0 ID=cds-WJG95762.1;Parent=gene-PUW34_14605;Dbxref=NCBI_GP:WJG95762.1;Name=WJG95762.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=PUW34_14605;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WJG95762.1;transl_table=11 CP118122.1 Genbank gene 2993450 2993698 . + . ID=gene-PUW34_14610;Name=PUW34_14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14610 CP118122.1 GeneMarkS-2+ CDS 2993450 2993698 . + 0 ID=cds-WJG95763.1;Parent=gene-PUW34_14610;Dbxref=NCBI_GP:WJG95763.1;Name=WJG95763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_14610;product=hypothetical protein;protein_id=WJG95763.1;transl_table=11 CP118122.1 Genbank gene 2993848 2994297 . - . ID=gene-PUW34_14615;Name=PUW34_14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14615 CP118122.1 Protein Homology CDS 2993848 2994297 . - 0 ID=cds-WJG95764.1;Parent=gene-PUW34_14615;Dbxref=NCBI_GP:WJG95764.1;Name=WJG95764.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=PUW34_14615;product=flavodoxin;protein_id=WJG95764.1;transl_table=11 CP118122.1 Genbank gene 2994316 2995098 . - . ID=gene-PUW34_14620;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=PUW34_14620 CP118122.1 Protein Homology CDS 2994316 2995098 . - 0 ID=cds-WJG95765.1;Parent=gene-PUW34_14620;Dbxref=NCBI_GP:WJG95765.1;Name=WJG95765.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=PUW34_14620;product=tRNA pseudouridine(65) synthase TruC;protein_id=WJG95765.1;transl_table=11 CP118122.1 Genbank gene 2995098 2995427 . - . ID=gene-PUW34_14625;Name=PUW34_14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14625 CP118122.1 Protein Homology CDS 2995098 2995427 . - 0 ID=cds-WJG95766.1;Parent=gene-PUW34_14625;Dbxref=NCBI_GP:WJG95766.1;Name=WJG95766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=PUW34_14625;product=YqcC family protein;protein_id=WJG95766.1;transl_table=11 CP118122.1 Genbank gene 2996039 2996584 . - . ID=gene-PUW34_14630;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=PUW34_14630 CP118122.1 Protein Homology CDS 2996039 2996584 . - 0 ID=cds-WJG95767.1;Parent=gene-PUW34_14630;Dbxref=NCBI_GP:WJG95767.1;Name=WJG95767.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=PUW34_14630;product=SecY-interacting protein;protein_id=WJG95767.1;transl_table=11 CP118122.1 Genbank gene 2996653 2997501 . + . ID=gene-PUW34_14635;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=PUW34_14635 CP118122.1 Protein Homology CDS 2996653 2997501 . + 0 ID=cds-WJG95768.1;Parent=gene-PUW34_14635;Dbxref=NCBI_GP:WJG95768.1;Name=WJG95768.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=PUW34_14635;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WJG95768.1;transl_table=11 CP118122.1 Genbank gene 2997614 2998978 . + . ID=gene-PUW34_14640;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=PUW34_14640 CP118122.1 Protein Homology CDS 2997614 2998978 . + 0 ID=cds-WJG95769.1;Parent=gene-PUW34_14640;Dbxref=NCBI_GP:WJG95769.1;Name=WJG95769.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=PUW34_14640;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WJG95769.1;transl_table=11 CP118122.1 Genbank gene 2999542 3000831 . + . ID=gene-PUW34_14645;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=PUW34_14645 CP118122.1 Protein Homology CDS 2999542 3000831 . + 0 ID=cds-WJG95770.1;Parent=gene-PUW34_14645;Dbxref=NCBI_GP:WJG95770.1;Name=WJG95770.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=PUW34_14645;product=HAAAP family serine/threonine permease SdaC;protein_id=WJG95770.1;transl_table=11 CP118122.1 Genbank gene 3000890 3002257 . + . ID=gene-PUW34_14650;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=PUW34_14650 CP118122.1 Protein Homology CDS 3000890 3002257 . + 0 ID=cds-WJG95771.1;Parent=gene-PUW34_14650;Dbxref=NCBI_GP:WJG95771.1;Name=WJG95771.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=PUW34_14650;product=L-serine ammonia-lyase II;protein_id=WJG95771.1;transl_table=11 CP118122.1 Genbank gene 3002427 3003182 . + . ID=gene-PUW34_14655;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=PUW34_14655 CP118122.1 Protein Homology CDS 3002427 3003182 . + 0 ID=cds-WJG95772.1;Parent=gene-PUW34_14655;Dbxref=NCBI_GP:WJG95772.1;Name=WJG95772.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=PUW34_14655;product=flap endonuclease Xni;protein_id=WJG95772.1;transl_table=11 CP118122.1 Genbank pseudogene 3003274 3004421 . - . ID=gene-PUW34_14660;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=pseudogene;locus_tag=PUW34_14660;pseudo=true CP118122.1 Protein Homology CDS 3003274 3004421 . - 0 ID=cds-PUW34_14660;Parent=gene-PUW34_14660;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=PUW34_14660;product=lactaldehyde reductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3004438 3005085 . - . ID=gene-PUW34_14665;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=PUW34_14665 CP118122.1 Protein Homology CDS 3004438 3005085 . - 0 ID=cds-WJG95773.1;Parent=gene-PUW34_14665;Dbxref=NCBI_GP:WJG95773.1;Name=WJG95773.1;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=PUW34_14665;product=L-fuculose-phosphate aldolase;protein_id=WJG95773.1;transl_table=11 CP118122.1 Genbank gene 3005640 3006956 . + . ID=gene-PUW34_14670;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PUW34_14670 CP118122.1 Protein Homology CDS 3005640 3006956 . + 0 ID=cds-WJG95774.1;Parent=gene-PUW34_14670;Dbxref=NCBI_GP:WJG95774.1;Name=WJG95774.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=PUW34_14670;product=L-fucose:H+ symporter permease;protein_id=WJG95774.1;transl_table=11 CP118122.1 Genbank gene 3006988 3008763 . + . ID=gene-PUW34_14675;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=PUW34_14675 CP118122.1 Protein Homology CDS 3006988 3008763 . + 0 ID=cds-WJG95775.1;Parent=gene-PUW34_14675;Dbxref=NCBI_GP:WJG95775.1;Name=WJG95775.1;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=PUW34_14675;product=L-fucose isomerase;protein_id=WJG95775.1;transl_table=11 CP118122.1 Genbank gene 3008864 3010282 . + . ID=gene-PUW34_14680;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=PUW34_14680 CP118122.1 Protein Homology CDS 3008864 3010282 . + 0 ID=cds-WJG95776.1;Parent=gene-PUW34_14680;Dbxref=NCBI_GP:WJG95776.1;Name=WJG95776.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=PUW34_14680;product=L-fuculokinase;protein_id=WJG95776.1;transl_table=11 CP118122.1 Genbank gene 3010284 3010706 . + . ID=gene-PUW34_14685;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=PUW34_14685 CP118122.1 Protein Homology CDS 3010284 3010706 . + 0 ID=cds-WJG95777.1;Parent=gene-PUW34_14685;Dbxref=NCBI_GP:WJG95777.1;Name=WJG95777.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=PUW34_14685;product=L-fucose mutarotase;protein_id=WJG95777.1;transl_table=11 CP118122.1 Genbank gene 3010764 3011474 . + . ID=gene-PUW34_14690;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=PUW34_14690 CP118122.1 Protein Homology CDS 3010764 3011474 . + 0 ID=cds-WJG95778.1;Parent=gene-PUW34_14690;Dbxref=NCBI_GP:WJG95778.1;Name=WJG95778.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=PUW34_14690;product=L-fucose operon activator;protein_id=WJG95778.1;transl_table=11 CP118122.1 Genbank gene 3011533 3012633 . - . ID=gene-PUW34_14695;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=PUW34_14695 CP118122.1 Protein Homology CDS 3011533 3012633 . - 0 ID=cds-WJG95779.1;Parent=gene-PUW34_14695;Dbxref=NCBI_GP:WJG95779.1;Name=WJG95779.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=PUW34_14695;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WJG95779.1;transl_table=11 CP118122.1 Genbank gene 3012626 3013021 . - . ID=gene-PUW34_14700;Name=PUW34_14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14700 CP118122.1 Protein Homology CDS 3012626 3013021 . - 0 ID=cds-WJG95780.1;Parent=gene-PUW34_14700;Dbxref=NCBI_GP:WJG95780.1;Name=WJG95780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=PUW34_14700;product=DUF423 domain-containing protein;protein_id=WJG95780.1;transl_table=11 CP118122.1 Genbank gene 3013040 3013957 . - . ID=gene-PUW34_14705;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=PUW34_14705 CP118122.1 Protein Homology CDS 3013040 3013957 . - 0 ID=cds-WJG95781.1;Parent=gene-PUW34_14705;Dbxref=NCBI_GP:WJG95781.1;Name=WJG95781.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=PUW34_14705;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WJG95781.1;transl_table=11 CP118122.1 Genbank gene 3014304 3014531 . - . ID=gene-PUW34_14710;Name=PUW34_14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14710 CP118122.1 Protein Homology CDS 3014304 3014531 . - 0 ID=cds-WJG95782.1;Parent=gene-PUW34_14710;Dbxref=NCBI_GP:WJG95782.1;Name=WJG95782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=PUW34_14710;product=YgdI/YgdR family lipoprotein;protein_id=WJG95782.1;transl_table=11 CP118122.1 Genbank gene 3014724 3015929 . + . ID=gene-PUW34_14715;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=PUW34_14715 CP118122.1 Protein Homology CDS 3014724 3015929 . + 0 ID=cds-WJG95783.1;Parent=gene-PUW34_14715;Dbxref=NCBI_GP:WJG95783.1;Name=WJG95783.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=PUW34_14715;product=cysteine desulfurase CsdA;protein_id=WJG95783.1;transl_table=11 CP118122.1 Genbank gene 3015929 3016372 . + . ID=gene-PUW34_14720;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=PUW34_14720 CP118122.1 Protein Homology CDS 3015929 3016372 . + 0 ID=cds-WJG95784.1;Parent=gene-PUW34_14720;Dbxref=NCBI_GP:WJG95784.1;Name=WJG95784.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=PUW34_14720;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WJG95784.1;transl_table=11 CP118122.1 Genbank gene 3016672 3017559 . + . ID=gene-PUW34_14725;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PUW34_14725 CP118122.1 Protein Homology CDS 3016672 3017559 . + 0 ID=cds-WJG99007.1;Parent=gene-PUW34_14725;Dbxref=NCBI_GP:WJG99007.1;Name=WJG99007.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=PUW34_14725;product=EamA family transporter RarD;protein_id=WJG99007.1;transl_table=11 CP118122.1 Genbank gene 3017611 3018417 . - . ID=gene-PUW34_14730;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=PUW34_14730 CP118122.1 Protein Homology CDS 3017611 3018417 . - 0 ID=cds-WJG95785.1;Parent=gene-PUW34_14730;Dbxref=NCBI_GP:WJG95785.1;Name=WJG95785.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=PUW34_14730;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WJG95785.1;transl_table=11 CP118122.1 Genbank gene 3018527 3019624 . - . ID=gene-PUW34_14735;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=PUW34_14735 CP118122.1 Protein Homology CDS 3018527 3019624 . - 0 ID=cds-WJG95786.1;Parent=gene-PUW34_14735;Dbxref=NCBI_GP:WJG95786.1;Name=WJG95786.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=PUW34_14735;product=murein transglycosylase A;protein_id=WJG95786.1;transl_table=11 CP118122.1 Genbank gene 3019832 3019908 . + . ID=gene-PUW34_14740;Name=PUW34_14740;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_14740 CP118122.1 tRNAscan-SE tRNA 3019832 3019908 . + . ID=rna-PUW34_14740;Parent=gene-PUW34_14740;anticodon=(pos:3019866..3019868);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_14740;product=tRNA-Met CP118122.1 tRNAscan-SE exon 3019832 3019908 . + . ID=exon-PUW34_14740-1;Parent=rna-PUW34_14740;anticodon=(pos:3019866..3019868);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_14740;product=tRNA-Met CP118122.1 Genbank gene 3019938 3020014 . + . ID=gene-PUW34_14745;Name=PUW34_14745;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_14745 CP118122.1 tRNAscan-SE tRNA 3019938 3020014 . + . ID=rna-PUW34_14745;Parent=gene-PUW34_14745;anticodon=(pos:3019972..3019974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_14745;product=tRNA-Met CP118122.1 tRNAscan-SE exon 3019938 3020014 . + . ID=exon-PUW34_14745-1;Parent=rna-PUW34_14745;anticodon=(pos:3019972..3019974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_14745;product=tRNA-Met CP118122.1 Genbank gene 3020124 3021377 . - . ID=gene-PUW34_14750;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=PUW34_14750 CP118122.1 Protein Homology CDS 3020124 3021377 . - 0 ID=cds-WJG95787.1;Parent=gene-PUW34_14750;Dbxref=NCBI_GP:WJG95787.1;Name=WJG95787.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=PUW34_14750;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WJG95787.1;transl_table=11 CP118122.1 Genbank gene 3021610 3022941 . + . ID=gene-PUW34_14755;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=PUW34_14755 CP118122.1 Protein Homology CDS 3021610 3022941 . + 0 ID=cds-WJG95788.1;Parent=gene-PUW34_14755;Dbxref=NCBI_GP:WJG95788.1;Name=WJG95788.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=PUW34_14755;product=amino-acid N-acetyltransferase;protein_id=WJG95788.1;transl_table=11 CP118122.1 Genbank gene 3023043 3024878 . - . ID=gene-PUW34_14760;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=PUW34_14760 CP118122.1 Protein Homology CDS 3023043 3024878 . - 0 ID=cds-WJG95789.1;Parent=gene-PUW34_14760;Dbxref=NCBI_GP:WJG95789.1;Name=WJG95789.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=PUW34_14760;product=exodeoxyribonuclease V subunit alpha;protein_id=WJG95789.1;transl_table=11 CP118122.1 Genbank gene 3024875 3028420 . - . ID=gene-PUW34_14765;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=PUW34_14765 CP118122.1 Protein Homology CDS 3024875 3028420 . - 0 ID=cds-WJG95790.1;Parent=gene-PUW34_14765;Dbxref=NCBI_GP:WJG95790.1;Name=WJG95790.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=PUW34_14765;product=exodeoxyribonuclease V subunit beta;protein_id=WJG95790.1;transl_table=11 CP118122.1 Genbank gene 3028413 3031301 . - . ID=gene-PUW34_14770;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=PUW34_14770 CP118122.1 Protein Homology CDS 3028413 3031301 . - 0 ID=cds-WJG95791.1;Parent=gene-PUW34_14770;Dbxref=NCBI_GP:WJG95791.1;Name=WJG95791.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=PUW34_14770;product=pitrilysin;protein_id=WJG95791.1;transl_table=11 CP118122.1 Genbank gene 3031479 3031988 . - . ID=gene-PUW34_14775;Name=PUW34_14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14775 CP118122.1 Protein Homology CDS 3031479 3031988 . - 0 ID=cds-WJG99008.1;Parent=gene-PUW34_14775;Dbxref=NCBI_GP:WJG99008.1;Name=WJG99008.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037683.2;locus_tag=PUW34_14775;product=hypothetical protein;protein_id=WJG99008.1;transl_table=11 CP118122.1 Genbank pseudogene 3031886 3034801 . - . ID=gene-PUW34_14780;Name=recC;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=PUW34_14780;pseudo=true CP118122.1 Protein Homology CDS 3031886 3034801 . - 0 ID=cds-PUW34_14780;Parent=gene-PUW34_14780;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: protein motif:HMM:NF008289.0;locus_tag=PUW34_14780;product=exodeoxyribonuclease V subunit gamma;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3034865 3035185 . - . ID=gene-PUW34_14785;Name=PUW34_14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14785 CP118122.1 Protein Homology CDS 3034865 3035185 . - 0 ID=cds-WJG95792.1;Parent=gene-PUW34_14785;Dbxref=NCBI_GP:WJG95792.1;Name=WJG95792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=PUW34_14785;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WJG95792.1;transl_table=11 CP118122.1 Genbank gene 3035170 3035577 . - . ID=gene-PUW34_14790;Name=PUW34_14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14790 CP118122.1 Protein Homology CDS 3035170 3035577 . - 0 ID=cds-WJG95793.1;Parent=gene-PUW34_14790;Dbxref=NCBI_GP:WJG95793.1;Name=WJG95793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=PUW34_14790;product=DUF2509 family protein;protein_id=WJG95793.1;transl_table=11 CP118122.1 Genbank gene 3035574 3036137 . - . ID=gene-PUW34_14795;Name=PUW34_14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14795 CP118122.1 Protein Homology CDS 3035574 3036137 . - 0 ID=cds-WJG95794.1;Parent=gene-PUW34_14795;Dbxref=NCBI_GP:WJG95794.1;Name=WJG95794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=PUW34_14795;product=prepilin peptidase-dependent protein;protein_id=WJG95794.1;transl_table=11 CP118122.1 Genbank gene 3036128 3036598 . - . ID=gene-PUW34_14800;Name=PUW34_14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14800 CP118122.1 Protein Homology CDS 3036128 3036598 . - 0 ID=cds-WJG95795.1;Parent=gene-PUW34_14800;Dbxref=NCBI_GP:WJG95795.1;Name=WJG95795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=PUW34_14800;product=prepilin peptidase-dependent protein;protein_id=WJG95795.1;transl_table=11 CP118122.1 Genbank gene 3036782 3037576 . - . ID=gene-PUW34_14805;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=PUW34_14805 CP118122.1 Protein Homology CDS 3036782 3037576 . - 0 ID=cds-WJG95796.1;Parent=gene-PUW34_14805;Dbxref=NCBI_GP:WJG95796.1;Name=WJG95796.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=PUW34_14805;product=thymidylate synthase;protein_id=WJG95796.1;transl_table=11 CP118122.1 Genbank gene 3037583 3038458 . - . ID=gene-PUW34_14810;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=PUW34_14810 CP118122.1 Protein Homology CDS 3037583 3038458 . - 0 ID=cds-WJG95797.1;Parent=gene-PUW34_14810;Dbxref=NCBI_GP:WJG95797.1;Name=WJG95797.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=PUW34_14810;product=prolipoprotein diacylglyceryl transferase;protein_id=WJG95797.1;transl_table=11 CP118122.1 Genbank gene 3038674 3040920 . - . ID=gene-PUW34_14815;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PUW34_14815 CP118122.1 Protein Homology CDS 3038674 3040920 . - 0 ID=cds-WJG95798.1;Parent=gene-PUW34_14815;Dbxref=NCBI_GP:WJG95798.1;Name=WJG95798.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=PUW34_14815;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WJG95798.1;transl_table=11 CP118122.1 Genbank gene 3040933 3041463 . - . ID=gene-PUW34_14820;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=PUW34_14820 CP118122.1 Protein Homology CDS 3040933 3041463 . - 0 ID=cds-WJG95799.1;Parent=gene-PUW34_14820;Dbxref=NCBI_GP:WJG95799.1;Name=WJG95799.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=PUW34_14820;product=RNA pyrophosphohydrolase;protein_id=WJG95799.1;transl_table=11 CP118122.1 Genbank gene 3042146 3042841 . + . ID=gene-PUW34_14825;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=PUW34_14825 CP118122.1 Protein Homology CDS 3042146 3042841 . + 0 ID=cds-WJG95800.1;Parent=gene-PUW34_14825;Dbxref=NCBI_GP:WJG95800.1;Name=WJG95800.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=PUW34_14825;product=DNA mismatch repair endonuclease MutH;protein_id=WJG95800.1;transl_table=11 CP118122.1 Genbank gene 3043023 3043736 . + . ID=gene-PUW34_14830;Name=PUW34_14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14830 CP118122.1 Protein Homology CDS 3043023 3043736 . + 0 ID=cds-WJG95801.1;Parent=gene-PUW34_14830;Dbxref=NCBI_GP:WJG95801.1;Name=WJG95801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=PUW34_14830;product=TerC family protein;protein_id=WJG95801.1;transl_table=11 CP118122.1 Genbank gene 3043880 3044098 . + . ID=gene-PUW34_14835;Name=PUW34_14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14835 CP118122.1 Protein Homology CDS 3043880 3044098 . + 0 ID=cds-WJG95802.1;Parent=gene-PUW34_14835;Dbxref=NCBI_GP:WJG95802.1;Name=WJG95802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=PUW34_14835;product=YgdI/YgdR family lipoprotein;protein_id=WJG95802.1;transl_table=11 CP118122.1 Genbank gene 3044289 3045329 . + . ID=gene-PUW34_14840;Name=PUW34_14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14840 CP118122.1 Protein Homology CDS 3044289 3045329 . + 0 ID=cds-WJG95803.1;Parent=gene-PUW34_14840;Dbxref=NCBI_GP:WJG95803.1;Name=WJG95803.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=PUW34_14840;product=NADP(H)-dependent aldo-keto reductase;protein_id=WJG95803.1;transl_table=11 CP118122.1 Genbank gene 3045416 3046618 . - . ID=gene-PUW34_14845;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=PUW34_14845 CP118122.1 Protein Homology CDS 3045416 3046618 . - 0 ID=cds-WJG95804.1;Parent=gene-PUW34_14845;Dbxref=NCBI_GP:WJG95804.1;Name=WJG95804.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=PUW34_14845;product=lysophospholipid transporter LplT;protein_id=WJG95804.1;transl_table=11 CP118122.1 Genbank gene 3046611 3048770 . - . ID=gene-PUW34_14850;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=PUW34_14850 CP118122.1 Protein Homology CDS 3046611 3048770 . - 0 ID=cds-WJG95805.1;Parent=gene-PUW34_14850;Dbxref=NCBI_GP:WJG95805.1;Name=WJG95805.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=PUW34_14850;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WJG95805.1;transl_table=11 CP118122.1 Genbank gene 3049363 3050391 . + . ID=gene-PUW34_14855;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=PUW34_14855 CP118122.1 Protein Homology CDS 3049363 3050391 . + 0 ID=cds-WJG95806.1;Parent=gene-PUW34_14855;Dbxref=NCBI_GP:WJG95806.1;Name=WJG95806.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=PUW34_14855;product=HTH-type transcriptional regulator GalR;protein_id=WJG95806.1;transl_table=11 CP118122.1 Genbank gene 3050402 3051424 . + . ID=gene-PUW34_14860;Name=PUW34_14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14860 CP118122.1 Protein Homology CDS 3050402 3051424 . + 0 ID=cds-WJG99009.1;Parent=gene-PUW34_14860;Dbxref=NCBI_GP:WJG99009.1;Name=WJG99009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=PUW34_14860;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG99009.1;transl_table=11 CP118122.1 Genbank pseudogene 3051434 3052694 . - . ID=gene-PUW34_14865;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=pseudogene;locus_tag=PUW34_14865;pseudo=true CP118122.1 Protein Homology CDS 3051434 3052694 . - 0 ID=cds-PUW34_14865;Parent=gene-PUW34_14865;Note=frameshifted;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=PUW34_14865;product=diaminopimelate decarboxylase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3052812 3053747 . + . ID=gene-PUW34_14870;Name=PUW34_14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14870 CP118122.1 Protein Homology CDS 3052812 3053747 . + 0 ID=cds-WJG95807.1;Parent=gene-PUW34_14870;Dbxref=NCBI_GP:WJG95807.1;Name=WJG95807.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=PUW34_14870;product=LysR family transcriptional regulator;protein_id=WJG95807.1;transl_table=11 CP118122.1 Genbank gene 3053719 3054426 . - . ID=gene-PUW34_14875;Name=PUW34_14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14875 CP118122.1 Protein Homology CDS 3053719 3054426 . - 0 ID=cds-WJG95808.1;Parent=gene-PUW34_14875;Dbxref=NCBI_GP:WJG95808.1;Name=WJG95808.1;Ontology_term=GO:0006807,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=PUW34_14875;product=aspartate/glutamate racemase;protein_id=WJG95808.1;transl_table=11 CP118122.1 Genbank pseudogene 3054539 3055952 . - . ID=gene-PUW34_14880;Name=araE;gbkey=Gene;gene=araE;gene_biotype=pseudogene;locus_tag=PUW34_14880;pseudo=true CP118122.1 Protein Homology CDS 3054539 3055952 . - 0 ID=cds-PUW34_14880;Parent=gene-PUW34_14880;Note=frameshifted;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=PUW34_14880;product=arabinose-proton symporter AraE;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3056306 3057067 . - . ID=gene-PUW34_14885;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=pseudogene;locus_tag=PUW34_14885;pseudo=true CP118122.1 Protein Homology CDS 3056306 3057067 . - 0 ID=cds-PUW34_14885;Parent=gene-PUW34_14885;Note=internal stop;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=PUW34_14885;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3057124 3057960 . - . ID=gene-PUW34_14890;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=PUW34_14890 CP118122.1 Protein Homology CDS 3057124 3057960 . - 0 ID=cds-WJG95809.1;Parent=gene-PUW34_14890;Dbxref=NCBI_GP:WJG95809.1;Name=WJG95809.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=PUW34_14890;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WJG95809.1;transl_table=11 CP118122.1 Genbank gene 3058391 3059569 . - . ID=gene-PUW34_14895;Name=PUW34_14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14895 CP118122.1 Protein Homology CDS 3058391 3059569 . - 0 ID=cds-WJG95810.1;Parent=gene-PUW34_14895;Dbxref=NCBI_GP:WJG95810.1;Name=WJG95810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=PUW34_14895;product=acetyl-CoA C-acetyltransferase;protein_id=WJG95810.1;transl_table=11 CP118122.1 Genbank pseudogene 3059692 3060554 . - . ID=gene-PUW34_14900;Name=PUW34_14900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_14900;pseudo=true CP118122.1 Protein Homology CDS 3059692 3060554 . - 0 ID=cds-PUW34_14900;Parent=gene-PUW34_14900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=PUW34_14900;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3060658 3060786 . + . ID=gene-PUW34_14905;Name=PUW34_14905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_14905;pseudo=true CP118122.1 Protein Homology CDS 3060658 3060786 . + 0 ID=cds-PUW34_14905;Parent=gene-PUW34_14905;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=PUW34_14905;product=chlorhexidine efflux transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3060962 3061213 . + . ID=gene-PUW34_14910;Name=PUW34_14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14910 CP118122.1 Protein Homology CDS 3060962 3061213 . + 0 ID=cds-WJG99010.1;Parent=gene-PUW34_14910;Dbxref=NCBI_GP:WJG99010.1;Name=WJG99010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=PUW34_14910;product=hypothetical protein;protein_id=WJG99010.1;transl_table=11 CP118122.1 Genbank gene 3061493 3062299 . + . ID=gene-PUW34_14915;Name=PUW34_14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14915 CP118122.1 Protein Homology CDS 3061493 3062299 . + 0 ID=cds-WJG95811.1;Parent=gene-PUW34_14915;Dbxref=NCBI_GP:WJG95811.1;Name=WJG95811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=PUW34_14915;product=DUF1460 domain-containing protein;protein_id=WJG95811.1;transl_table=11 CP118122.1 Genbank gene 3062431 3062504 . - . ID=gene-PUW34_14920;Name=PUW34_14920;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_14920 CP118122.1 tRNAscan-SE tRNA 3062431 3062504 . - . ID=rna-PUW34_14920;Parent=gene-PUW34_14920;anticodon=(pos:complement(3062470..3062472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_14920;product=tRNA-Gly CP118122.1 tRNAscan-SE exon 3062431 3062504 . - . ID=exon-PUW34_14920-1;Parent=rna-PUW34_14920;anticodon=(pos:complement(3062470..3062472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_14920;product=tRNA-Gly CP118122.1 Genbank gene 3062584 3063342 . - . ID=gene-PUW34_14925;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=PUW34_14925 CP118122.1 Protein Homology CDS 3062584 3063342 . - 0 ID=cds-WJG95812.1;Parent=gene-PUW34_14925;Dbxref=NCBI_GP:WJG95812.1;Name=WJG95812.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=PUW34_14925;product=amidase activator ActS;protein_id=WJG95812.1;transl_table=11 CP118122.1 Genbank gene 3063607 3064152 . + . ID=gene-PUW34_14930;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=PUW34_14930 CP118122.1 Protein Homology CDS 3063607 3064152 . + 0 ID=cds-WJG95813.1;Parent=gene-PUW34_14930;Dbxref=NCBI_GP:WJG95813.1;Name=WJG95813.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=PUW34_14930;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WJG95813.1;transl_table=11 CP118122.1 Genbank gene 3064228 3065745 . - . ID=gene-PUW34_14935;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PUW34_14935 CP118122.1 Protein Homology CDS 3064228 3065745 . - 0 ID=cds-WJG95814.1;Parent=gene-PUW34_14935;Dbxref=NCBI_GP:WJG95814.1;Name=WJG95814.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=PUW34_14935;product=lysine--tRNA ligase;protein_id=WJG95814.1;transl_table=11 CP118122.1 Genbank gene 3065755 3066853 . - . ID=gene-PUW34_14940;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=PUW34_14940 CP118122.1 Protein Homology CDS 3066779 3066853 . - 0 ID=cds-WJG95815.1;Parent=gene-PUW34_14940;Dbxref=NCBI_GP:WJG95815.1;Name=WJG95815.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PUW34_14940;product=peptide chain release factor 2;protein_id=WJG95815.1;transl_table=11 CP118122.1 Protein Homology CDS 3065755 3066777 . - 0 ID=cds-WJG95815.1;Parent=gene-PUW34_14940;Dbxref=NCBI_GP:WJG95815.1;Name=WJG95815.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PUW34_14940;product=peptide chain release factor 2;protein_id=WJG95815.1;transl_table=11 CP118122.1 Genbank gene 3066958 3068691 . - . ID=gene-PUW34_14945;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=PUW34_14945 CP118122.1 Protein Homology CDS 3066958 3068691 . - 0 ID=cds-WJG95816.1;Parent=gene-PUW34_14945;Dbxref=NCBI_GP:WJG95816.1;Name=WJG95816.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=PUW34_14945;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WJG95816.1;transl_table=11 CP118122.1 Genbank gene 3068697 3069410 . - . ID=gene-PUW34_14950;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=PUW34_14950 CP118122.1 Protein Homology CDS 3068697 3069410 . - 0 ID=cds-WJG95817.1;Parent=gene-PUW34_14950;Dbxref=NCBI_GP:WJG95817.1;Name=WJG95817.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=PUW34_14950;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WJG95817.1;transl_table=11 CP118122.1 Genbank gene 3069434 3070330 . - . ID=gene-PUW34_14955;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=PUW34_14955 CP118122.1 Protein Homology CDS 3069434 3070330 . - 0 ID=cds-WJG95818.1;Parent=gene-PUW34_14955;Dbxref=NCBI_GP:WJG95818.1;Name=WJG95818.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=PUW34_14955;product=site-specific tyrosine recombinase XerD;protein_id=WJG95818.1;transl_table=11 CP118122.1 Genbank gene 3070443 3070964 . + . ID=gene-PUW34_14960;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=PUW34_14960 CP118122.1 Protein Homology CDS 3070443 3070964 . + 0 ID=cds-WJG95819.1;Parent=gene-PUW34_14960;Dbxref=NCBI_GP:WJG95819.1;Name=WJG95819.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=PUW34_14960;product=flavodoxin FldB;protein_id=WJG95819.1;transl_table=11 CP118122.1 Genbank gene 3071017 3071430 . - . ID=gene-PUW34_14965;Name=PUW34_14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14965 CP118122.1 Protein Homology CDS 3071017 3071430 . - 0 ID=cds-WJG95820.1;Parent=gene-PUW34_14965;Dbxref=NCBI_GP:WJG95820.1;Name=WJG95820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=PUW34_14965;product=protein YgfX;protein_id=WJG95820.1;transl_table=11 CP118122.1 Genbank gene 3071411 3071677 . - . ID=gene-PUW34_14970;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=PUW34_14970 CP118122.1 Protein Homology CDS 3071411 3071677 . - 0 ID=cds-WJG95821.1;Parent=gene-PUW34_14970;Dbxref=NCBI_GP:WJG95821.1;Name=WJG95821.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=PUW34_14970;product=FAD assembly factor SdhE;protein_id=WJG95821.1;transl_table=11 CP118122.1 Genbank gene 3071927 3072907 . + . ID=gene-PUW34_14975;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=PUW34_14975 CP118122.1 Protein Homology CDS 3071927 3072907 . + 0 ID=cds-WJG95822.1;Parent=gene-PUW34_14975;Dbxref=NCBI_GP:WJG95822.1;Name=WJG95822.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=PUW34_14975;product=tRNA-modifying protein YgfZ;protein_id=WJG95822.1;transl_table=11 CP118122.1 Genbank gene 3073023 3073682 . - . ID=gene-PUW34_14980;Name=PUW34_14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14980 CP118122.1 Protein Homology CDS 3073023 3073682 . - 0 ID=cds-WJG95823.1;Parent=gene-PUW34_14980;Dbxref=NCBI_GP:WJG95823.1;Name=WJG95823.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=PUW34_14980;product=hemolysin III family protein;protein_id=WJG95823.1;transl_table=11 CP118122.1 Genbank gene 3073846 3074157 . - . ID=gene-PUW34_14985;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=PUW34_14985 CP118122.1 Protein Homology CDS 3073846 3074157 . - 0 ID=cds-WJG95824.1;Parent=gene-PUW34_14985;Dbxref=NCBI_GP:WJG95824.1;Name=WJG95824.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=PUW34_14985;product=N(4)-acetylcytidine aminohydrolase;protein_id=WJG95824.1;transl_table=11 CP118122.1 Genbank pseudogene 3074315 3075747 . + . ID=gene-PUW34_14990;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=pseudogene;locus_tag=PUW34_14990;pseudo=true CP118122.1 Protein Homology CDS 3074315 3075747 . + 0 ID=cds-PUW34_14990;Parent=gene-PUW34_14990;Note=frameshifted;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=PUW34_14990;product=6-phospho-beta-glucosidase BglA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3075795 3076688 . - . ID=gene-PUW34_14995;Name=PUW34_14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_14995 CP118122.1 Protein Homology CDS 3075795 3076688 . - 0 ID=cds-WJG95825.1;Parent=gene-PUW34_14995;Dbxref=NCBI_GP:WJG95825.1;Name=WJG95825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=PUW34_14995;product=transporter;protein_id=WJG95825.1;transl_table=11 CP118122.1 Genbank gene 3077144 3080017 . - . ID=gene-PUW34_15000;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=PUW34_15000 CP118122.1 Protein Homology CDS 3077144 3080017 . - 0 ID=cds-WJG95826.1;Parent=gene-PUW34_15000;Dbxref=NCBI_GP:WJG95826.1;Name=WJG95826.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=PUW34_15000;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WJG95826.1;transl_table=11 CP118122.1 Genbank gene 3080180 3080569 . - . ID=gene-PUW34_15005;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=PUW34_15005 CP118122.1 Protein Homology CDS 3080180 3080569 . - 0 ID=cds-WJG95827.1;Parent=gene-PUW34_15005;Dbxref=NCBI_GP:WJG95827.1;Name=WJG95827.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=PUW34_15005;product=glycine cleavage system protein GcvH;protein_id=WJG95827.1;transl_table=11 CP118122.1 Genbank gene 3080595 3081689 . - . ID=gene-PUW34_15010;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=PUW34_15010 CP118122.1 Protein Homology CDS 3080595 3081689 . - 0 ID=cds-WJG95828.1;Parent=gene-PUW34_15010;Dbxref=NCBI_GP:WJG95828.1;Name=WJG95828.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=PUW34_15010;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WJG95828.1;transl_table=11 CP118122.1 Genbank gene 3082144 3083346 . - . ID=gene-PUW34_15015;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=PUW34_15015 CP118122.1 Protein Homology CDS 3082144 3083346 . - 0 ID=cds-WJG95829.1;Parent=gene-PUW34_15015;Dbxref=NCBI_GP:WJG95829.1;Name=WJG95829.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=PUW34_15015;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WJG95829.1;transl_table=11 CP118122.1 Genbank gene 3083472 3084650 . - . ID=gene-PUW34_15020;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=PUW34_15020 CP118122.1 Protein Homology CDS 3083472 3084650 . - 0 ID=cds-WJG95830.1;Parent=gene-PUW34_15020;Dbxref=NCBI_GP:WJG95830.1;Name=WJG95830.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=PUW34_15020;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WJG95830.1;transl_table=11 CP118122.1 Genbank gene 3084647 3085963 . - . ID=gene-PUW34_15025;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=PUW34_15025 CP118122.1 Protein Homology CDS 3084647 3085963 . - 0 ID=cds-WJG95831.1;Parent=gene-PUW34_15025;Dbxref=NCBI_GP:WJG95831.1;Name=WJG95831.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=PUW34_15025;product=Xaa-Pro aminopeptidase;protein_id=WJG95831.1;transl_table=11 CP118122.1 Genbank gene 3085989 3086567 . - . ID=gene-PUW34_15030;Name=PUW34_15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15030 CP118122.1 Protein Homology CDS 3085989 3086567 . - 0 ID=cds-WJG95832.1;Parent=gene-PUW34_15030;Dbxref=NCBI_GP:WJG95832.1;Name=WJG95832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=PUW34_15030;product=YecA family protein;protein_id=WJG95832.1;transl_table=11 CP118122.1 Genbank gene 3086734 3087063 . + . ID=gene-PUW34_15035;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=PUW34_15035 CP118122.1 Protein Homology CDS 3086734 3087063 . + 0 ID=cds-WJG95833.1;Parent=gene-PUW34_15035;Dbxref=NCBI_GP:WJG95833.1;Name=WJG95833.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=PUW34_15035;product=cell division protein ZapA;protein_id=WJG95833.1;transl_table=11 CP118122.1 Genbank gene 3087105 3087288 . + . ID=gene-PUW34_15040;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=PUW34_15040 CP118122.1 cmsearch ncRNA 3087105 3087288 . + . ID=rna-PUW34_15040;Parent=gene-PUW34_15040;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_15040;product=6S RNA CP118122.1 cmsearch exon 3087105 3087288 . + . ID=exon-PUW34_15040-1;Parent=rna-PUW34_15040;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_15040;product=6S RNA CP118122.1 Genbank gene 3087309 3087905 . + . ID=gene-PUW34_15045;Name=PUW34_15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15045 CP118122.1 Protein Homology CDS 3087309 3087905 . + 0 ID=cds-WJG95834.1;Parent=gene-PUW34_15045;Dbxref=NCBI_GP:WJG95834.1;Name=WJG95834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=PUW34_15045;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WJG95834.1;transl_table=11 CP118122.1 Genbank gene 3088286 3089518 . - . ID=gene-PUW34_15050;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=PUW34_15050 CP118122.1 Protein Homology CDS 3088286 3089518 . - 0 ID=cds-WJG95835.1;Parent=gene-PUW34_15050;Dbxref=NCBI_GP:WJG95835.1;Name=WJG95835.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=PUW34_15050;product=phosphoglycerate dehydrogenase;protein_id=WJG95835.1;transl_table=11 CP118122.1 Genbank gene 3089785 3090444 . - . ID=gene-PUW34_15055;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=PUW34_15055 CP118122.1 Protein Homology CDS 3089785 3090444 . - 0 ID=cds-WJG95836.1;Parent=gene-PUW34_15055;Dbxref=NCBI_GP:WJG95836.1;Name=WJG95836.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=PUW34_15055;product=ribose-5-phosphate isomerase RpiA;protein_id=WJG95836.1;transl_table=11 CP118122.1 Genbank gene 3090598 3091491 . + . ID=gene-PUW34_15060;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=PUW34_15060 CP118122.1 Protein Homology CDS 3090598 3091491 . + 0 ID=cds-WJG95837.1;Parent=gene-PUW34_15060;Dbxref=NCBI_GP:WJG95837.1;Name=WJG95837.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=PUW34_15060;product=DNA-binding transcriptional regulator ArgP;protein_id=WJG95837.1;transl_table=11 CP118122.1 Genbank gene 3091757 3092503 . - . ID=gene-PUW34_15065;Name=PUW34_15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15065 CP118122.1 Protein Homology CDS 3091757 3092503 . - 0 ID=cds-WJG95838.1;Parent=gene-PUW34_15065;Dbxref=NCBI_GP:WJG95838.1;Name=WJG95838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=PUW34_15065;product=oxidative stress defense protein;protein_id=WJG95838.1;transl_table=11 CP118122.1 Genbank gene 3092597 3093232 . - . ID=gene-PUW34_15070;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=PUW34_15070 CP118122.1 Protein Homology CDS 3092597 3093232 . - 0 ID=cds-WJG95839.1;Parent=gene-PUW34_15070;Dbxref=NCBI_GP:WJG95839.1;Name=WJG95839.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=PUW34_15070;product=arginine exporter ArgO;protein_id=WJG95839.1;transl_table=11 CP118122.1 Genbank gene 3093433 3094293 . - . ID=gene-PUW34_15075;Name=PUW34_15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15075 CP118122.1 Protein Homology CDS 3093433 3094293 . - 0 ID=cds-WJG95840.1;Parent=gene-PUW34_15075;Dbxref=NCBI_GP:WJG95840.1;Name=WJG95840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=PUW34_15075;product=small-conductance mechanosensitive channel MscS;protein_id=WJG95840.1;transl_table=11 CP118122.1 Genbank gene 3094526 3095605 . - . ID=gene-PUW34_15080;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=PUW34_15080 CP118122.1 Protein Homology CDS 3094526 3095605 . - 0 ID=cds-WJG95841.1;Parent=gene-PUW34_15080;Dbxref=NCBI_GP:WJG95841.1;Name=WJG95841.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=PUW34_15080;product=class II fructose-bisphosphate aldolase;protein_id=WJG95841.1;transl_table=11 CP118122.1 Genbank gene 3095706 3096869 . - . ID=gene-PUW34_15085;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=PUW34_15085 CP118122.1 Protein Homology CDS 3095706 3096869 . - 0 ID=cds-WJG95842.1;Parent=gene-PUW34_15085;Dbxref=NCBI_GP:WJG95842.1;Name=WJG95842.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=PUW34_15085;product=phosphoglycerate kinase;protein_id=WJG95842.1;transl_table=11 CP118122.1 Genbank gene 3096891 3097937 . - . ID=gene-PUW34_15090;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=PUW34_15090 CP118122.1 Protein Homology CDS 3096891 3097937 . - 0 ID=cds-WJG95843.1;Parent=gene-PUW34_15090;Dbxref=NCBI_GP:WJG95843.1;Name=WJG95843.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=PUW34_15090;product=erythrose-4-phosphate dehydrogenase;protein_id=WJG95843.1;transl_table=11 CP118122.1 Genbank gene 3098311 3098736 . + . ID=gene-PUW34_15095;Name=PUW34_15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15095 CP118122.1 Protein Homology CDS 3098311 3098736 . + 0 ID=cds-WJG95844.1;Parent=gene-PUW34_15095;Dbxref=NCBI_GP:WJG95844.1;Name=WJG95844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=PUW34_15095;product=DNA-binding protein;protein_id=WJG95844.1;transl_table=11 CP118122.1 Genbank gene 3098762 3099340 . + . ID=gene-PUW34_15100;Name=PUW34_15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15100 CP118122.1 Protein Homology CDS 3098762 3099340 . + 0 ID=cds-WJG95845.1;Parent=gene-PUW34_15100;Dbxref=NCBI_GP:WJG95845.1;Name=WJG95845.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=PUW34_15100;product=ECF transporter S component;protein_id=WJG95845.1;transl_table=11 CP118122.1 Genbank gene 3099341 3100048 . + . ID=gene-PUW34_15105;Name=PUW34_15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15105 CP118122.1 Protein Homology CDS 3099341 3100048 . + 0 ID=cds-WJG95846.1;Parent=gene-PUW34_15105;Dbxref=NCBI_GP:WJG95846.1;Name=WJG95846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=PUW34_15105;product=energy-coupling factor transporter transmembrane component T;protein_id=WJG95846.1;transl_table=11 CP118122.1 Genbank gene 3100036 3100713 . + . ID=gene-PUW34_15110;Name=PUW34_15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15110 CP118122.1 Protein Homology CDS 3100036 3100713 . + 0 ID=cds-WJG95847.1;Parent=gene-PUW34_15110;Dbxref=NCBI_GP:WJG95847.1;Name=WJG95847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=PUW34_15110;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WJG95847.1;transl_table=11 CP118122.1 Genbank gene 3100707 3101363 . + . ID=gene-PUW34_15115;Name=PUW34_15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15115 CP118122.1 Protein Homology CDS 3100707 3101363 . + 0 ID=cds-WJG95848.1;Parent=gene-PUW34_15115;Dbxref=NCBI_GP:WJG95848.1;Name=WJG95848.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=PUW34_15115;product=ATP-binding cassette domain-containing protein;protein_id=WJG95848.1;transl_table=11 CP118122.1 Genbank gene 3101407 3103398 . - . ID=gene-PUW34_15120;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PUW34_15120 CP118122.1 Protein Homology CDS 3101407 3103398 . - 0 ID=cds-WJG95849.1;Parent=gene-PUW34_15120;Dbxref=NCBI_GP:WJG95849.1;Name=WJG95849.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=PUW34_15120;product=transketolase;protein_id=WJG95849.1;transl_table=11 CP118122.1 Genbank gene 3103674 3104432 . + . ID=gene-PUW34_15125;Name=PUW34_15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15125 CP118122.1 Protein Homology CDS 3103674 3104432 . + 0 ID=cds-WJG95850.1;Parent=gene-PUW34_15125;Dbxref=NCBI_GP:WJG95850.1;Name=WJG95850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=PUW34_15125;product=M48 family metallopeptidase;protein_id=WJG95850.1;transl_table=11 CP118122.1 Genbank pseudogene 3104533 3105452 . - . ID=gene-PUW34_15130;Name=speB;gbkey=Gene;gene=speB;gene_biotype=pseudogene;locus_tag=PUW34_15130;pseudo=true CP118122.1 Protein Homology CDS 3104533 3105452 . - 0 ID=cds-PUW34_15130;Parent=gene-PUW34_15130;Note=frameshifted;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499737.1;locus_tag=PUW34_15130;product=agmatinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3105657 3106613 . - . ID=gene-PUW34_15135;Name=PUW34_15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15135 CP118122.1 Protein Homology CDS 3105657 3106613 . - 0 ID=cds-WJG95851.1;Parent=gene-PUW34_15135;Dbxref=NCBI_GP:WJG95851.1;Name=WJG95851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=PUW34_15135;product=alpha/beta hydrolase;protein_id=WJG95851.1;transl_table=11 CP118122.1 Genbank gene 3106806 3107300 . - . ID=gene-PUW34_15140;Name=PUW34_15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15140 CP118122.1 Protein Homology CDS 3106806 3107300 . - 0 ID=cds-WJG95852.1;Parent=gene-PUW34_15140;Dbxref=NCBI_GP:WJG95852.1;Name=WJG95852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839091.1;locus_tag=PUW34_15140;product=YhcH/YjgK/YiaL family protein;protein_id=WJG95852.1;transl_table=11 CP118122.1 Genbank gene 3107339 3108346 . - . ID=gene-PUW34_15145;Name=PUW34_15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15145 CP118122.1 Protein Homology CDS 3107339 3108346 . - 0 ID=cds-WJG95853.1;Parent=gene-PUW34_15145;Dbxref=NCBI_GP:WJG95853.1;Name=WJG95853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=PUW34_15145;product=Ldh family oxidoreductase;protein_id=WJG95853.1;transl_table=11 CP118122.1 Genbank gene 3108360 3109376 . - . ID=gene-PUW34_15150;Name=PUW34_15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15150 CP118122.1 Protein Homology CDS 3108360 3109376 . - 0 ID=cds-WJG95854.1;Parent=gene-PUW34_15150;Dbxref=NCBI_GP:WJG95854.1;Name=WJG95854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=PUW34_15150;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WJG95854.1;transl_table=11 CP118122.1 Genbank gene 3109379 3110851 . - . ID=gene-PUW34_15155;Name=PUW34_15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15155 CP118122.1 Protein Homology CDS 3109379 3110851 . - 0 ID=cds-WJG95855.1;Parent=gene-PUW34_15155;Dbxref=NCBI_GP:WJG95855.1;Name=WJG95855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=PUW34_15155;product=mannitol dehydrogenase family protein;protein_id=WJG95855.1;transl_table=11 CP118122.1 Genbank gene 3111500 3111715 . + . ID=gene-PUW34_15160;Name=PUW34_15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15160 CP118122.1 Protein Homology CDS 3111500 3111715 . + 0 ID=cds-WJG99011.1;Parent=gene-PUW34_15160;Dbxref=NCBI_GP:WJG99011.1;Name=WJG99011.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.2;locus_tag=PUW34_15160;product=hypothetical protein;protein_id=WJG99011.1;transl_table=11 CP118122.1 Genbank gene 3111691 3111759 . + . ID=gene-PUW34_15165;Name=PUW34_15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15165 CP118122.1 Protein Homology CDS 3111691 3111759 . + 0 ID=cds-WJG99012.1;Parent=gene-PUW34_15165;Dbxref=NCBI_GP:WJG99012.1;Name=WJG99012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.2;locus_tag=PUW34_15165;product=hypothetical protein;protein_id=WJG99012.1;transl_table=11 CP118122.1 Genbank gene 3112074 3112874 . - . ID=gene-PUW34_15170;Name=PUW34_15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15170 CP118122.1 Protein Homology CDS 3112074 3112874 . - 0 ID=cds-WJG95856.1;Parent=gene-PUW34_15170;Dbxref=NCBI_GP:WJG95856.1;Name=WJG95856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=PUW34_15170;product=FadR/GntR family transcriptional regulator;protein_id=WJG95856.1;transl_table=11 CP118122.1 Genbank gene 3113028 3113759 . - . ID=gene-PUW34_15175;Name=PUW34_15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15175 CP118122.1 Protein Homology CDS 3113028 3113759 . - 0 ID=cds-WJG95857.1;Parent=gene-PUW34_15175;Dbxref=NCBI_GP:WJG95857.1;Name=WJG95857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=PUW34_15175;product=hypothetical protein;protein_id=WJG95857.1;transl_table=11 CP118122.1 Genbank gene 3113904 3115880 . - . ID=gene-PUW34_15180;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=PUW34_15180 CP118122.1 Protein Homology CDS 3113904 3115880 . - 0 ID=cds-WJG95858.1;Parent=gene-PUW34_15180;Dbxref=NCBI_GP:WJG95858.1;Name=WJG95858.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=PUW34_15180;product=biosynthetic arginine decarboxylase;protein_id=WJG95858.1;transl_table=11 CP118122.1 Genbank gene 3115889 3116020 . - . ID=gene-PUW34_15185;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=PUW34_15185 CP118122.1 Protein Homology CDS 3115889 3116020 . - 0 ID=cds-WJG95859.1;Parent=gene-PUW34_15185;Dbxref=NCBI_GP:WJG95859.1;Name=WJG95859.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=PUW34_15185;product=acid stress response protein YqgB;protein_id=WJG95859.1;transl_table=11 CP118122.1 Genbank gene 3116106 3116255 . - . ID=gene-PUW34_15190;Name=PUW34_15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15190 CP118122.1 Protein Homology CDS 3116106 3116255 . - 0 ID=cds-WJG95860.1;Parent=gene-PUW34_15190;Dbxref=NCBI_GP:WJG95860.1;Name=WJG95860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=PUW34_15190;product=hypothetical protein;protein_id=WJG95860.1;transl_table=11 CP118122.1 Genbank gene 3116315 3116614 . - . ID=gene-PUW34_15195;Name=PUW34_15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15195 CP118122.1 GeneMarkS-2+ CDS 3116315 3116614 . - 0 ID=cds-WJG95861.1;Parent=gene-PUW34_15195;Dbxref=NCBI_GP:WJG95861.1;Name=WJG95861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_15195;product=hypothetical protein;protein_id=WJG95861.1;transl_table=11 CP118122.1 Genbank pseudogene 3116670 3117823 . + . ID=gene-PUW34_15200;Name=metK;gbkey=Gene;gene=metK;gene_biotype=pseudogene;locus_tag=PUW34_15200;pseudo=true CP118122.1 Protein Homology CDS 3116670 3117823 . + 0 ID=cds-PUW34_15200;Parent=gene-PUW34_15200;Note=frameshifted;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=PUW34_15200;product=methionine adenosyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3118315 3119709 . + . ID=gene-PUW34_15205;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=PUW34_15205 CP118122.1 Protein Homology CDS 3118315 3119709 . + 0 ID=cds-WJG95862.1;Parent=gene-PUW34_15205;Dbxref=NCBI_GP:WJG95862.1;Name=WJG95862.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=PUW34_15205;product=galactose/proton symporter;protein_id=WJG95862.1;transl_table=11 CP118122.1 Genbank gene 3119788 3120285 . + . ID=gene-PUW34_15210;Name=PUW34_15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15210 CP118122.1 Protein Homology CDS 3119788 3120285 . + 0 ID=cds-WJG95863.1;Parent=gene-PUW34_15210;Dbxref=NCBI_GP:WJG95863.1;Name=WJG95863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=PUW34_15210;product=SprT family zinc-dependent metalloprotease;protein_id=WJG95863.1;transl_table=11 CP118122.1 Genbank gene 3120381 3121088 . + . ID=gene-PUW34_15215;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=PUW34_15215 CP118122.1 Protein Homology CDS 3120381 3121088 . + 0 ID=cds-WJG95864.1;Parent=gene-PUW34_15215;Dbxref=NCBI_GP:WJG95864.1;Name=WJG95864.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=PUW34_15215;product=deoxyribonuclease I;protein_id=WJG95864.1;transl_table=11 CP118122.1 Genbank gene 3121165 3121896 . + . ID=gene-PUW34_15220;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=PUW34_15220 CP118122.1 Protein Homology CDS 3121165 3121896 . + 0 ID=cds-WJG95865.1;Parent=gene-PUW34_15220;Dbxref=NCBI_GP:WJG95865.1;Name=WJG95865.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=PUW34_15220;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WJG95865.1;transl_table=11 CP118122.1 Genbank gene 3121916 3122863 . + . ID=gene-PUW34_15225;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=PUW34_15225 CP118122.1 Protein Homology CDS 3121916 3122863 . + 0 ID=cds-WJG95866.1;Parent=gene-PUW34_15225;Dbxref=NCBI_GP:WJG95866.1;Name=WJG95866.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=PUW34_15225;product=glutathione synthase;protein_id=WJG95866.1;transl_table=11 CP118122.1 Genbank gene 3123079 3123642 . + . ID=gene-PUW34_15230;Name=PUW34_15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15230 CP118122.1 Protein Homology CDS 3123079 3123642 . + 0 ID=cds-WJG95867.1;Parent=gene-PUW34_15230;Dbxref=NCBI_GP:WJG95867.1;Name=WJG95867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=PUW34_15230;product=YqgE/AlgH family protein;protein_id=WJG95867.1;transl_table=11 CP118122.1 Genbank gene 3123642 3124058 . + . ID=gene-PUW34_15235;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=PUW34_15235 CP118122.1 Protein Homology CDS 3123642 3124058 . + 0 ID=cds-WJG95868.1;Parent=gene-PUW34_15235;Dbxref=NCBI_GP:WJG95868.1;Name=WJG95868.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=PUW34_15235;product=Holliday junction resolvase RuvX;protein_id=WJG95868.1;transl_table=11 CP118122.1 Genbank gene 3124105 3124791 . - . ID=gene-PUW34_15240;Name=PUW34_15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15240 CP118122.1 Protein Homology CDS 3124105 3124791 . - 0 ID=cds-WJG95869.1;Parent=gene-PUW34_15240;Dbxref=NCBI_GP:WJG95869.1;Name=WJG95869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=PUW34_15240;product=IclR family transcriptional regulator;protein_id=WJG95869.1;transl_table=11 CP118122.1 Genbank gene 3124923 3125903 . - . ID=gene-PUW34_15245;Name=PUW34_15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15245 CP118122.1 Protein Homology CDS 3124923 3125903 . - 0 ID=cds-WJG95870.1;Parent=gene-PUW34_15245;Dbxref=NCBI_GP:WJG95870.1;Name=WJG95870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=PUW34_15245;product=type IV pilus twitching motility protein PilT;protein_id=WJG95870.1;transl_table=11 CP118122.1 Genbank pseudogene 3125921 3126624 . + . ID=gene-PUW34_15250;Name=PUW34_15250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15250;pseudo=true CP118122.1 Protein Homology CDS 3125921 3126624 . + 0 ID=cds-PUW34_15250;Parent=gene-PUW34_15250;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=PUW34_15250;product=YggS family pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3126643 3127209 . + . ID=gene-PUW34_15255;Name=PUW34_15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15255 CP118122.1 Protein Homology CDS 3126643 3127209 . + 0 ID=cds-WJG95871.1;Parent=gene-PUW34_15255;Dbxref=NCBI_GP:WJG95871.1;Name=WJG95871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=PUW34_15255;product=YggT family protein;protein_id=WJG95871.1;transl_table=11 CP118122.1 Genbank gene 3127206 3127496 . + . ID=gene-PUW34_15260;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=PUW34_15260 CP118122.1 Protein Homology CDS 3127206 3127496 . + 0 ID=cds-WJG95872.1;Parent=gene-PUW34_15260;Dbxref=NCBI_GP:WJG95872.1;Name=WJG95872.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=PUW34_15260;product=DUF167 family protein YggU;protein_id=WJG95872.1;transl_table=11 CP118122.1 Genbank gene 3127504 3128097 . + . ID=gene-PUW34_15265;Name=PUW34_15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15265 CP118122.1 Protein Homology CDS 3127504 3128097 . + 0 ID=cds-WJG95873.1;Parent=gene-PUW34_15265;Dbxref=NCBI_GP:WJG95873.1;Name=WJG95873.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=PUW34_15265;product=XTP/dITP diphosphatase;protein_id=WJG95873.1;transl_table=11 CP118122.1 Genbank gene 3128090 3129226 . + . ID=gene-PUW34_15270;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=PUW34_15270 CP118122.1 Protein Homology CDS 3128090 3129226 . + 0 ID=cds-WJG95874.1;Parent=gene-PUW34_15270;Dbxref=NCBI_GP:WJG95874.1;Name=WJG95874.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=PUW34_15270;product=radical SAM family heme chaperone HemW;protein_id=WJG95874.1;transl_table=11 CP118122.1 Genbank pseudogene 3129317 3130324 . - . ID=gene-PUW34_15275;Name=PUW34_15275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15275;pseudo=true CP118122.1 Protein Homology CDS 3129317 3130324 . - 0 ID=cds-PUW34_15275;Parent=gene-PUW34_15275;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=PUW34_15275;product=DUF1202 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3130457 3131503 . - . ID=gene-PUW34_15280;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=PUW34_15280 CP118122.1 Protein Homology CDS 3130457 3131503 . - 0 ID=cds-WJG95875.1;Parent=gene-PUW34_15280;Dbxref=NCBI_GP:WJG95875.1;Name=WJG95875.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=PUW34_15280;product=L-asparaginase 2;protein_id=WJG95875.1;transl_table=11 CP118122.1 Genbank gene 3131692 3132411 . - . ID=gene-PUW34_15285;Name=PUW34_15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15285 CP118122.1 Protein Homology CDS 3131692 3132411 . - 0 ID=cds-WJG95876.1;Parent=gene-PUW34_15285;Dbxref=NCBI_GP:WJG95876.1;Name=WJG95876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=PUW34_15285;product=DUF2884 domain-containing protein;protein_id=WJG95876.1;transl_table=11 CP118122.1 Genbank gene 3132461 3132787 . - . ID=gene-PUW34_15290;Name=PUW34_15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15290 CP118122.1 Protein Homology CDS 3132461 3132787 . - 0 ID=cds-WJG95877.1;Parent=gene-PUW34_15290;Dbxref=NCBI_GP:WJG95877.1;Name=WJG95877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=PUW34_15290;product=YggL family protein;protein_id=WJG95877.1;transl_table=11 CP118122.1 Genbank gene 3132787 3133506 . - . ID=gene-PUW34_15295;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=PUW34_15295 CP118122.1 Protein Homology CDS 3132787 3133506 . - 0 ID=cds-WJG95878.1;Parent=gene-PUW34_15295;Dbxref=NCBI_GP:WJG95878.1;Name=WJG95878.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=PUW34_15295;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WJG95878.1;transl_table=11 CP118122.1 Genbank gene 3133661 3134713 . + . ID=gene-PUW34_15300;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=PUW34_15300 CP118122.1 Protein Homology CDS 3133661 3134713 . + 0 ID=cds-WJG95879.1;Parent=gene-PUW34_15300;Dbxref=NCBI_GP:WJG95879.1;Name=WJG95879.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=PUW34_15300;product=A/G-specific adenine glycosylase;protein_id=WJG95879.1;transl_table=11 CP118122.1 Genbank gene 3134741 3135016 . + . ID=gene-PUW34_15305;Name=PUW34_15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15305 CP118122.1 Protein Homology CDS 3134741 3135016 . + 0 ID=cds-WJG95880.1;Parent=gene-PUW34_15305;Dbxref=NCBI_GP:WJG95880.1;Name=WJG95880.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=PUW34_15305;product=oxidative damage protection protein;protein_id=WJG95880.1;transl_table=11 CP118122.1 Genbank gene 3135129 3136214 . + . ID=gene-PUW34_15310;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=PUW34_15310 CP118122.1 Protein Homology CDS 3135129 3136214 . + 0 ID=cds-WJG95881.1;Parent=gene-PUW34_15310;Dbxref=NCBI_GP:WJG95881.1;Name=WJG95881.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=PUW34_15310;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WJG95881.1;transl_table=11 CP118122.1 Genbank gene 3136431 3137687 . + . ID=gene-PUW34_15315;Name=PUW34_15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15315 CP118122.1 Protein Homology CDS 3136431 3137687 . + 0 ID=cds-WJG95882.1;Parent=gene-PUW34_15315;Dbxref=NCBI_GP:WJG95882.1;Name=WJG95882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=PUW34_15315;product=nucleoside permease;protein_id=WJG95882.1;transl_table=11 CP118122.1 Genbank pseudogene 3137749 3139880 . - . ID=gene-PUW34_15320;Name=PUW34_15320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15320;pseudo=true CP118122.1 Protein Homology CDS 3137749 3139880 . - 0 ID=cds-PUW34_15320;Parent=gene-PUW34_15320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=PUW34_15320;product=ornithine decarboxylase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3140305 3141012 . + . ID=gene-PUW34_15325;Name=PUW34_15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15325 CP118122.1 Protein Homology CDS 3140305 3141012 . + 0 ID=cds-WJG95883.1;Parent=gene-PUW34_15325;Dbxref=NCBI_GP:WJG95883.1;Name=WJG95883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=PUW34_15325;product=DUF554 domain-containing protein;protein_id=WJG95883.1;transl_table=11 CP118122.1 Genbank gene 3141118 3141193 . + . ID=gene-PUW34_15330;Name=PUW34_15330;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_15330 CP118122.1 tRNAscan-SE tRNA 3141118 3141193 . + . ID=rna-PUW34_15330;Parent=gene-PUW34_15330;anticodon=(pos:3141151..3141153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_15330;product=tRNA-Phe CP118122.1 tRNAscan-SE exon 3141118 3141193 . + . ID=exon-PUW34_15330-1;Parent=rna-PUW34_15330;anticodon=(pos:3141151..3141153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_15330;product=tRNA-Phe CP118122.1 Genbank gene 3141352 3141732 . - . ID=gene-PUW34_15335;Name=PUW34_15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15335 CP118122.1 Protein Homology CDS 3141352 3141732 . - 0 ID=cds-WJG95884.1;Parent=gene-PUW34_15335;Dbxref=NCBI_GP:WJG95884.1;Name=WJG95884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=PUW34_15335;product=VOC family protein;protein_id=WJG95884.1;transl_table=11 CP118122.1 Genbank gene 3141797 3143122 . - . ID=gene-PUW34_15340;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=PUW34_15340 CP118122.1 Protein Homology CDS 3141797 3143122 . - 0 ID=cds-WJG95885.1;Parent=gene-PUW34_15340;Dbxref=NCBI_GP:WJG95885.1;Name=WJG95885.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=PUW34_15340;product=itaconate CoA-transferase RipA/Ict;protein_id=WJG95885.1;transl_table=11 CP118122.1 Genbank pseudogene 3143147 3143673 . - . ID=gene-PUW34_15345;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=pseudogene;locus_tag=PUW34_15345;pseudo=true CP118122.1 Protein Homology CDS 3143147 3143673 . - 0 ID=cds-PUW34_15345;Parent=gene-PUW34_15345;Note=Second step in itaconate degradation.%3B frameshifted;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=PUW34_15345;product=(R)-specific enoyl-CoA hydratase RipB/Ich;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3143697 3144539 . - . ID=gene-PUW34_15350;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=PUW34_15350 CP118122.1 Protein Homology CDS 3143697 3144539 . - 0 ID=cds-WJG95886.1;Parent=gene-PUW34_15350;Dbxref=NCBI_GP:WJG95886.1;Name=WJG95886.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=PUW34_15350;product=itaconate degradation C-C-lyase RipC;protein_id=WJG95886.1;transl_table=11 CP118122.1 Genbank gene 3144631 3145509 . + . ID=gene-PUW34_15355;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=PUW34_15355 CP118122.1 Protein Homology CDS 3144631 3145509 . + 0 ID=cds-WJG95887.1;Parent=gene-PUW34_15355;Dbxref=NCBI_GP:WJG95887.1;Name=WJG95887.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=PUW34_15355;product=itaconate degradation transcriptional regulator RipR;protein_id=WJG95887.1;transl_table=11 CP118122.1 Genbank gene 3145557 3147296 . - . ID=gene-PUW34_15360;Name=PUW34_15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15360 CP118122.1 Protein Homology CDS 3145557 3147296 . - 0 ID=cds-WJG95888.1;Parent=gene-PUW34_15360;Dbxref=NCBI_GP:WJG95888.1;Name=WJG95888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=PUW34_15360;product=arylsulfatase;protein_id=WJG95888.1;transl_table=11 CP118122.1 Genbank pseudogene 3147365 3148547 . - . ID=gene-PUW34_15365;Name=PUW34_15365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15365;pseudo=true CP118122.1 Protein Homology CDS 3147365 3148547 . - 0 ID=cds-PUW34_15365;Parent=gene-PUW34_15365;Note=frameshifted;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=PUW34_15365;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3149059 3149742 . + . ID=gene-PUW34_15370;Name=PUW34_15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15370 CP118122.1 Protein Homology CDS 3149059 3149742 . + 0 ID=cds-WJG99013.1;Parent=gene-PUW34_15370;Dbxref=NCBI_GP:WJG99013.1;Name=WJG99013.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=PUW34_15370;product=LuxR C-terminal-related transcriptional regulator;protein_id=WJG99013.1;transl_table=11 CP118122.1 Genbank gene 3149846 3150403 . - . ID=gene-PUW34_15375;Name=PUW34_15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15375 CP118122.1 Protein Homology CDS 3149846 3150403 . - 0 ID=cds-WJG95889.1;Parent=gene-PUW34_15375;Dbxref=NCBI_GP:WJG95889.1;Name=WJG95889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=PUW34_15375;product=DUF3156 family protein;protein_id=WJG95889.1;transl_table=11 CP118122.1 Genbank gene 3150381 3151880 . - . ID=gene-PUW34_15380;Name=PUW34_15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15380 CP118122.1 Protein Homology CDS 3150381 3151880 . - 0 ID=cds-WJG95890.1;Parent=gene-PUW34_15380;Dbxref=NCBI_GP:WJG95890.1;Name=WJG95890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=PUW34_15380;product=APC family permease;protein_id=WJG95890.1;transl_table=11 CP118122.1 Genbank gene 3152089 3152463 . - . ID=gene-PUW34_15385;Name=PUW34_15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15385 CP118122.1 Protein Homology CDS 3152089 3152463 . - 0 ID=cds-WJG95891.1;Parent=gene-PUW34_15385;Dbxref=NCBI_GP:WJG95891.1;Name=WJG95891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=PUW34_15385;product=cupin domain-containing protein;protein_id=WJG95891.1;transl_table=11 CP118122.1 Genbank gene 3152478 3153779 . - . ID=gene-PUW34_15390;Name=PUW34_15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15390 CP118122.1 Protein Homology CDS 3152478 3153779 . - 0 ID=cds-WJG95892.1;Parent=gene-PUW34_15390;Dbxref=NCBI_GP:WJG95892.1;Name=WJG95892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=PUW34_15390;product=FAD-binding oxidoreductase;protein_id=WJG95892.1;transl_table=11 CP118122.1 Genbank gene 3153941 3155425 . + . ID=gene-PUW34_15395;Name=PUW34_15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15395 CP118122.1 Protein Homology CDS 3153941 3155425 . + 0 ID=cds-WJG95893.1;Parent=gene-PUW34_15395;Dbxref=NCBI_GP:WJG95893.1;Name=WJG95893.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=PUW34_15395;product=aldehyde dehydrogenase family protein;protein_id=WJG95893.1;transl_table=11 CP118122.1 Genbank gene 3155561 3155941 . - . ID=gene-PUW34_15400;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=PUW34_15400 CP118122.1 Protein Homology CDS 3155561 3155941 . - 0 ID=cds-WJG99014.1;Parent=gene-PUW34_15400;Dbxref=NCBI_GP:WJG99014.1;Name=WJG99014.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=PUW34_15400;product=anti-adapter protein IraD;protein_id=WJG99014.1;transl_table=11 CP118122.1 Genbank gene 3155941 3156426 . - . ID=gene-PUW34_15405;Name=PUW34_15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15405 CP118122.1 Protein Homology CDS 3155941 3156426 . - 0 ID=cds-WJG95894.1;Parent=gene-PUW34_15405;Dbxref=NCBI_GP:WJG95894.1;Name=WJG95894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=PUW34_15405;product=Hcp family type VI secretion system effector;protein_id=WJG95894.1;transl_table=11 CP118122.1 Genbank gene 3157152 3158075 . - . ID=gene-PUW34_15410;Name=PUW34_15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15410 CP118122.1 Protein Homology CDS 3157152 3158075 . - 0 ID=cds-WJG95895.1;Parent=gene-PUW34_15410;Dbxref=NCBI_GP:WJG95895.1;Name=WJG95895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=PUW34_15410;product=polysaccharide deacetylase;protein_id=WJG95895.1;transl_table=11 CP118122.1 Genbank gene 3158114 3158992 . - . ID=gene-PUW34_15415;Name=PUW34_15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15415 CP118122.1 Protein Homology CDS 3158114 3158992 . - 0 ID=cds-WJG95896.1;Parent=gene-PUW34_15415;Dbxref=NCBI_GP:WJG95896.1;Name=WJG95896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=PUW34_15415;product=carbon-nitrogen hydrolase family protein;protein_id=WJG95896.1;transl_table=11 CP118122.1 Genbank gene 3159388 3160692 . - . ID=gene-PUW34_15420;Name=PUW34_15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15420 CP118122.1 Protein Homology CDS 3159388 3160692 . - 0 ID=cds-WJG95897.1;Parent=gene-PUW34_15420;Dbxref=NCBI_GP:WJG95897.1;Name=WJG95897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=PUW34_15420;product=MFS transporter;protein_id=WJG95897.1;transl_table=11 CP118122.1 Genbank gene 3161097 3162281 . + . ID=gene-PUW34_15425;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=PUW34_15425 CP118122.1 Protein Homology CDS 3161097 3162281 . + 0 ID=cds-WJG95898.1;Parent=gene-PUW34_15425;Dbxref=NCBI_GP:WJG95898.1;Name=WJG95898.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=PUW34_15425;product=mannonate dehydratase;protein_id=WJG95898.1;transl_table=11 CP118122.1 Genbank gene 3162392 3163864 . + . ID=gene-PUW34_15430;Name=PUW34_15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15430 CP118122.1 Protein Homology CDS 3162392 3163864 . + 0 ID=cds-WJG95899.1;Parent=gene-PUW34_15430;Dbxref=NCBI_GP:WJG95899.1;Name=WJG95899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=PUW34_15430;product=fructuronate reductase;protein_id=WJG95899.1;transl_table=11 CP118122.1 Genbank gene 3163876 3165288 . + . ID=gene-PUW34_15435;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=PUW34_15435 CP118122.1 Protein Homology CDS 3163876 3165288 . + 0 ID=cds-WJG95900.1;Parent=gene-PUW34_15435;Dbxref=NCBI_GP:WJG95900.1;Name=WJG95900.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=PUW34_15435;product=glucuronate isomerase;protein_id=WJG95900.1;transl_table=11 CP118122.1 Genbank gene 3165588 3166643 . - . ID=gene-PUW34_15440;Name=PUW34_15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15440 CP118122.1 Protein Homology CDS 3165588 3166643 . - 0 ID=cds-WJG95901.1;Parent=gene-PUW34_15440;Dbxref=NCBI_GP:WJG95901.1;Name=WJG95901.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=PUW34_15440;product=methyl-accepting chemotaxis protein;protein_id=WJG95901.1;transl_table=11 CP118122.1 Genbank pseudogene 3167313 3169168 . - . ID=gene-PUW34_15445;Name=gss;gbkey=Gene;gene=gss;gene_biotype=pseudogene;locus_tag=PUW34_15445;pseudo=true CP118122.1 Protein Homology CDS 3167313 3169168 . - 0 ID=cds-PUW34_15445;Parent=gene-PUW34_15445;Note=frameshifted;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=PUW34_15445;product=bifunctional glutathionylspermidine amidase/synthase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3169395 3170260 . + . ID=gene-PUW34_15450;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=pseudogene;locus_tag=PUW34_15450;pseudo=true CP118122.1 Protein Homology CDS 3169395 3170260 . + 0 ID=cds-PUW34_15450;Parent=gene-PUW34_15450;Note=frameshifted;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=PUW34_15450;product=glutathione-dependent disulfide-bond oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3170328 3171038 . - . ID=gene-PUW34_15455;Name=PUW34_15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15455 CP118122.1 Protein Homology CDS 3170328 3171038 . - 0 ID=cds-WJG95902.1;Parent=gene-PUW34_15455;Dbxref=NCBI_GP:WJG95902.1;Name=WJG95902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=PUW34_15455;product=molybdate ABC transporter substrate-binding protein;protein_id=WJG95902.1;transl_table=11 CP118122.1 Genbank gene 3171038 3172090 . - . ID=gene-PUW34_15460;Name=PUW34_15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15460 CP118122.1 Protein Homology CDS 3171038 3172090 . - 0 ID=cds-WJG95903.1;Parent=gene-PUW34_15460;Dbxref=NCBI_GP:WJG95903.1;Name=WJG95903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=PUW34_15460;product=ABC transporter substrate-binding protein;protein_id=WJG95903.1;transl_table=11 CP118122.1 Genbank gene 3172166 3172414 . - . ID=gene-PUW34_15465;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=PUW34_15465 CP118122.1 Protein Homology CDS 3172166 3172414 . - 0 ID=cds-WJG95904.1;Parent=gene-PUW34_15465;Dbxref=NCBI_GP:WJG95904.1;Name=WJG95904.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=PUW34_15465;product=hydrogenase maturation factor HybG;protein_id=WJG95904.1;transl_table=11 CP118122.1 Genbank gene 3172442 3172783 . - . ID=gene-PUW34_15470;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW34_15470 CP118122.1 Protein Homology CDS 3172442 3172783 . - 0 ID=cds-WJG95905.1;Parent=gene-PUW34_15470;Dbxref=NCBI_GP:WJG95905.1;Name=WJG95905.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=PUW34_15470;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJG95905.1;transl_table=11 CP118122.1 Genbank gene 3172776 3173264 . - . ID=gene-PUW34_15475;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=PUW34_15475 CP118122.1 Protein Homology CDS 3172776 3173264 . - 0 ID=cds-WJG95906.1;Parent=gene-PUW34_15475;Dbxref=NCBI_GP:WJG95906.1;Name=WJG95906.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=PUW34_15475;product=hydrogenase-2 assembly chaperone;protein_id=WJG95906.1;transl_table=11 CP118122.1 Genbank gene 3173257 3173751 . - . ID=gene-PUW34_15480;Name=PUW34_15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15480 CP118122.1 Protein Homology CDS 3173257 3173751 . - 0 ID=cds-WJG95907.1;Parent=gene-PUW34_15480;Dbxref=NCBI_GP:WJG95907.1;Name=WJG95907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=PUW34_15480;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WJG95907.1;transl_table=11 CP118122.1 Genbank gene 3173751 3175454 . - . ID=gene-PUW34_15485;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=PUW34_15485 CP118122.1 Protein Homology CDS 3173751 3175454 . - 0 ID=cds-WJG95908.1;Parent=gene-PUW34_15485;Dbxref=NCBI_GP:WJG95908.1;Name=WJG95908.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=PUW34_15485;product=hydrogenase 2 large subunit;protein_id=WJG95908.1;transl_table=11 CP118122.1 Genbank gene 3175451 3176629 . - . ID=gene-PUW34_15490;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=PUW34_15490 CP118122.1 Protein Homology CDS 3175451 3176629 . - 0 ID=cds-WJG95909.1;Parent=gene-PUW34_15490;Dbxref=NCBI_GP:WJG95909.1;Name=WJG95909.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=PUW34_15490;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WJG95909.1;transl_table=11 CP118122.1 Genbank gene 3176619 3177605 . - . ID=gene-PUW34_15495;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=PUW34_15495 CP118122.1 Protein Homology CDS 3176619 3177605 . - 0 ID=cds-WJG95910.1;Parent=gene-PUW34_15495;Dbxref=NCBI_GP:WJG95910.1;Name=WJG95910.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=PUW34_15495;product=hydrogenase 2 operon protein HybA;protein_id=WJG95910.1;transl_table=11 CP118122.1 Genbank gene 3177608 3178726 . - . ID=gene-PUW34_15500;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=PUW34_15500 CP118122.1 Protein Homology CDS 3177608 3178726 . - 0 ID=cds-WJG95911.1;Parent=gene-PUW34_15500;Dbxref=NCBI_GP:WJG95911.1;Name=WJG95911.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=PUW34_15500;product=hydrogenase 2 small subunit;protein_id=WJG95911.1;transl_table=11 CP118122.1 Genbank gene 3178916 3179203 . - . ID=gene-PUW34_15505;Name=PUW34_15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15505 CP118122.1 Protein Homology CDS 3178916 3179203 . - 0 ID=cds-WJG95912.1;Parent=gene-PUW34_15505;Dbxref=NCBI_GP:WJG95912.1;Name=WJG95912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=PUW34_15505;product=DUF2623 family protein;protein_id=WJG95912.1;transl_table=11 CP118122.1 Genbank gene 3179288 3180931 . - . ID=gene-PUW34_15510;Name=PUW34_15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15510 CP118122.1 Protein Homology CDS 3179288 3180931 . - 0 ID=cds-WJG95913.1;Parent=gene-PUW34_15510;Dbxref=NCBI_GP:WJG95913.1;Name=WJG95913.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=PUW34_15510;product=methyl-accepting chemotaxis protein;protein_id=WJG95913.1;transl_table=11 CP118122.1 Genbank pseudogene 3181238 3181731 . - . ID=gene-PUW34_15515;Name=PUW34_15515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15515;pseudo=true CP118122.1 Protein Homology CDS 3181238 3181731 . - 0 ID=cds-PUW34_15515;Parent=gene-PUW34_15515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=PUW34_15515;product=TIGR00645 family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3182011 3182534 . - . ID=gene-PUW34_15520;Name=PUW34_15520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15520;pseudo=true CP118122.1 Protein Homology CDS 3182011 3182534 . - 0 ID=cds-PUW34_15520;Parent=gene-PUW34_15520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462069.1;locus_tag=PUW34_15520;product=RNA helicase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3182626 3183036 . + . ID=gene-PUW34_15525;Name=PUW34_15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15525 CP118122.1 Protein Homology CDS 3182626 3183036 . + 0 ID=cds-WJG95914.1;Parent=gene-PUW34_15525;Dbxref=NCBI_GP:WJG95914.1;Name=WJG95914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=PUW34_15525;product=hypothetical protein;protein_id=WJG95914.1;transl_table=11 CP118122.1 Genbank gene 3183023 3183427 . + . ID=gene-PUW34_15530;Name=PUW34_15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15530 CP118122.1 Protein Homology CDS 3183023 3183427 . + 0 ID=cds-WJG95915.1;Parent=gene-PUW34_15530;Dbxref=NCBI_GP:WJG95915.1;Name=WJG95915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=PUW34_15530;product=cytoplasmic protein;protein_id=WJG95915.1;transl_table=11 CP118122.1 Genbank gene 3183551 3184435 . + . ID=gene-PUW34_15535;Name=PUW34_15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15535 CP118122.1 Protein Homology CDS 3183551 3184435 . + 0 ID=cds-WJG95916.1;Parent=gene-PUW34_15535;Dbxref=NCBI_GP:WJG95916.1;Name=WJG95916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=PUW34_15535;product=SDR family oxidoreductase;protein_id=WJG95916.1;transl_table=11 CP118122.1 Genbank pseudogene 3184548 3184972 . - . ID=gene-PUW34_15540;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=pseudogene;locus_tag=PUW34_15540;pseudo=true CP118122.1 Protein Homology CDS 3184548 3184972 . - 0 ID=cds-PUW34_15540;Parent=gene-PUW34_15540;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=PUW34_15540;product=TonB system transport protein ExbD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3184979 3185713 . - . ID=gene-PUW34_15545;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=PUW34_15545 CP118122.1 Protein Homology CDS 3184979 3185713 . - 0 ID=cds-WJG95917.1;Parent=gene-PUW34_15545;Dbxref=NCBI_GP:WJG95917.1;Name=WJG95917.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=PUW34_15545;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WJG95917.1;transl_table=11 CP118122.1 Genbank gene 3185965 3187152 . + . ID=gene-PUW34_15550;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=PUW34_15550 CP118122.1 Protein Homology CDS 3185965 3187152 . + 0 ID=cds-WJG95918.1;Parent=gene-PUW34_15550;Dbxref=NCBI_GP:WJG95918.1;Name=WJG95918.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=PUW34_15550;product=cystathionine beta-lyase;protein_id=WJG95918.1;transl_table=11 CP118122.1 Genbank gene 3187292 3187951 . + . ID=gene-PUW34_15555;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=PUW34_15555 CP118122.1 Protein Homology CDS 3187292 3187951 . + 0 ID=cds-WJG95919.1;Parent=gene-PUW34_15555;Dbxref=NCBI_GP:WJG95919.1;Name=WJG95919.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=PUW34_15555;product=DedA family general envelope maintenance protein YghB;protein_id=WJG95919.1;transl_table=11 CP118122.1 Genbank gene 3188015 3188914 . - . ID=gene-PUW34_15560;Name=PUW34_15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15560 CP118122.1 Protein Homology CDS 3188015 3188914 . - 0 ID=cds-WJG99015.1;Parent=gene-PUW34_15560;Dbxref=NCBI_GP:WJG99015.1;Name=WJG99015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=PUW34_15560;product=AraC family transcriptional regulator;protein_id=WJG99015.1;transl_table=11 CP118122.1 Genbank gene 3189106 3190269 . + . ID=gene-PUW34_15565;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=PUW34_15565 CP118122.1 Protein Homology CDS 3189106 3190269 . + 0 ID=cds-WJG95920.1;Parent=gene-PUW34_15565;Dbxref=NCBI_GP:WJG95920.1;Name=WJG95920.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=PUW34_15565;product=alcohol dehydrogenase;protein_id=WJG95920.1;transl_table=11 CP118122.1 Genbank pseudogene 3190375 3191201 . + . ID=gene-PUW34_15570;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=pseudogene;locus_tag=PUW34_15570;pseudo=true CP118122.1 Protein Homology CDS 3190375 3191201 . + 0 ID=cds-PUW34_15570;Parent=gene-PUW34_15570;Note=frameshifted;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=PUW34_15570;product=2%2C5-didehydrogluconate reductase DkgA;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3191357 3192842 . + . ID=gene-PUW34_15575;Name=PUW34_15575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15575;pseudo=true CP118122.1 Protein Homology CDS 3191357 3192842 . + 0 ID=cds-PUW34_15575;Parent=gene-PUW34_15575;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=PUW34_15575;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3192887 3193342 . + . ID=gene-PUW34_15580;Name=PUW34_15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15580 CP118122.1 Protein Homology CDS 3192887 3193342 . + 0 ID=cds-WJG95921.1;Parent=gene-PUW34_15580;Dbxref=NCBI_GP:WJG95921.1;Name=WJG95921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=PUW34_15580;product=HIT family protein;protein_id=WJG95921.1;transl_table=11 CP118122.1 Genbank gene 3193500 3193694 . - . ID=gene-PUW34_15585;Name=PUW34_15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15585 CP118122.1 GeneMarkS-2+ CDS 3193500 3193694 . - 0 ID=cds-WJG95922.1;Parent=gene-PUW34_15585;Dbxref=NCBI_GP:WJG95922.1;Name=WJG95922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_15585;product=hypothetical protein;protein_id=WJG95922.1;transl_table=11 CP118122.1 Genbank gene 3193897 3196068 . - . ID=gene-PUW34_15590;Name=PUW34_15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15590 CP118122.1 Protein Homology CDS 3193897 3196068 . - 0 ID=cds-WJG95923.1;Parent=gene-PUW34_15590;Dbxref=NCBI_GP:WJG95923.1;Name=WJG95923.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=PUW34_15590;product=YgiQ family radical SAM protein;protein_id=WJG95923.1;transl_table=11 CP118122.1 Genbank gene 3196555 3197538 . + . ID=gene-PUW34_15595;Name=PUW34_15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15595 CP118122.1 Protein Homology CDS 3196555 3197538 . + 0 ID=cds-WJG95924.1;Parent=gene-PUW34_15595;Dbxref=NCBI_GP:WJG95924.1;Name=WJG95924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=PUW34_15595;product=TRAP transporter substrate-binding protein;protein_id=WJG95924.1;transl_table=11 CP118122.1 Genbank gene 3197580 3198062 . + . ID=gene-PUW34_15600;Name=PUW34_15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15600 CP118122.1 Protein Homology CDS 3197580 3198062 . + 0 ID=cds-WJG95925.1;Parent=gene-PUW34_15600;Dbxref=NCBI_GP:WJG95925.1;Name=WJG95925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=PUW34_15600;product=TRAP transporter small permease;protein_id=WJG95925.1;transl_table=11 CP118122.1 Genbank gene 3198073 3199380 . + . ID=gene-PUW34_15605;Name=PUW34_15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15605 CP118122.1 Protein Homology CDS 3198073 3199380 . + 0 ID=cds-WJG95926.1;Parent=gene-PUW34_15605;Dbxref=NCBI_GP:WJG95926.1;Name=WJG95926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=PUW34_15605;product=TRAP transporter large permease subunit;protein_id=WJG95926.1;transl_table=11 CP118122.1 Genbank gene 3199425 3200837 . - . ID=gene-PUW34_15610;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=PUW34_15610 CP118122.1 Protein Homology CDS 3199425 3200837 . - 0 ID=cds-WJG95927.1;Parent=gene-PUW34_15610;Dbxref=NCBI_GP:WJG95927.1;Name=WJG95927.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=PUW34_15610;product=cell division protein FtsP;protein_id=WJG95927.1;transl_table=11 CP118122.1 Genbank gene 3200911 3201648 . - . ID=gene-PUW34_15615;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=PUW34_15615 CP118122.1 Protein Homology CDS 3200911 3201648 . - 0 ID=cds-WJG95928.1;Parent=gene-PUW34_15615;Dbxref=NCBI_GP:WJG95928.1;Name=WJG95928.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=PUW34_15615;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WJG95928.1;transl_table=11 CP118122.1 Genbank gene 3201904 3204162 . - . ID=gene-PUW34_15620;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=PUW34_15620 CP118122.1 Protein Homology CDS 3201904 3204162 . - 0 ID=cds-WJG95929.1;Parent=gene-PUW34_15620;Dbxref=NCBI_GP:WJG95929.1;Name=WJG95929.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=PUW34_15620;product=DNA topoisomerase IV subunit A;protein_id=WJG95929.1;transl_table=11 CP118122.1 Genbank pseudogene 3204273 3205139 . - . ID=gene-PUW34_15625;Name=PUW34_15625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15625;pseudo=true CP118122.1 Protein Homology CDS 3204273 3205139 . - 0 ID=cds-PUW34_15625;Parent=gene-PUW34_15625;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=PUW34_15625;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3205211 3205603 . - . ID=gene-PUW34_15630;Name=PUW34_15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15630 CP118122.1 Protein Homology CDS 3205211 3205603 . - 0 ID=cds-WJG95930.1;Parent=gene-PUW34_15630;Dbxref=NCBI_GP:WJG95930.1;Name=WJG95930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=PUW34_15630;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WJG95930.1;transl_table=11 CP118122.1 Genbank gene 3205755 3206414 . + . ID=gene-PUW34_15635;Name=PUW34_15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15635 CP118122.1 Protein Homology CDS 3205755 3206414 . + 0 ID=cds-WJG95931.1;Parent=gene-PUW34_15635;Dbxref=NCBI_GP:WJG95931.1;Name=WJG95931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=PUW34_15635;product=two-component system response regulator QseB;protein_id=WJG95931.1;transl_table=11 CP118122.1 Genbank gene 3206411 3207760 . + . ID=gene-PUW34_15640;Name=PUW34_15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15640 CP118122.1 Protein Homology CDS 3206411 3207760 . + 0 ID=cds-WJG95932.1;Parent=gene-PUW34_15640;Dbxref=NCBI_GP:WJG95932.1;Name=WJG95932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=PUW34_15640;product=two-component system sensor histidine kinase QseC;protein_id=WJG95932.1;transl_table=11 CP118122.1 Genbank gene 3207867 3208448 . + . ID=gene-PUW34_15645;Name=PUW34_15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15645 CP118122.1 Protein Homology CDS 3207867 3208448 . + 0 ID=cds-WJG95933.1;Parent=gene-PUW34_15645;Dbxref=NCBI_GP:WJG95933.1;Name=WJG95933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=PUW34_15645;product=NAD(P)H-dependent oxidoreductase;protein_id=WJG95933.1;transl_table=11 CP118122.1 Genbank gene 3208480 3208794 . + . ID=gene-PUW34_15650;Name=PUW34_15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15650 CP118122.1 Protein Homology CDS 3208480 3208794 . + 0 ID=cds-WJG95934.1;Parent=gene-PUW34_15650;Dbxref=NCBI_GP:WJG95934.1;Name=WJG95934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=PUW34_15650;product=putative quinol monooxygenase;protein_id=WJG95934.1;transl_table=11 CP118122.1 Genbank gene 3208919 3210811 . - . ID=gene-PUW34_15655;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=PUW34_15655 CP118122.1 Protein Homology CDS 3208919 3210811 . - 0 ID=cds-WJG95935.1;Parent=gene-PUW34_15655;Dbxref=NCBI_GP:WJG95935.1;Name=WJG95935.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=PUW34_15655;product=DNA topoisomerase IV subunit B;protein_id=WJG95935.1;transl_table=11 CP118122.1 Genbank gene 3210839 3211420 . - . ID=gene-PUW34_15660;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=PUW34_15660 CP118122.1 Protein Homology CDS 3210839 3211420 . - 0 ID=cds-WJG95936.1;Parent=gene-PUW34_15660;Dbxref=NCBI_GP:WJG95936.1;Name=WJG95936.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=PUW34_15660;product=esterase YqiA;protein_id=WJG95936.1;transl_table=11 CP118122.1 Genbank gene 3211420 3212247 . - . ID=gene-PUW34_15665;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=PUW34_15665 CP118122.1 Protein Homology CDS 3211420 3212247 . - 0 ID=cds-WJG95937.1;Parent=gene-PUW34_15665;Dbxref=NCBI_GP:WJG95937.1;Name=WJG95937.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=PUW34_15665;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WJG95937.1;transl_table=11 CP118122.1 Genbank gene 3212272 3212694 . - . ID=gene-PUW34_15670;Name=PUW34_15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15670 CP118122.1 Protein Homology CDS 3212272 3212694 . - 0 ID=cds-WJG95938.1;Parent=gene-PUW34_15670;Dbxref=NCBI_GP:WJG95938.1;Name=WJG95938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=PUW34_15670;product=DUF1249 family protein;protein_id=WJG95938.1;transl_table=11 CP118122.1 Genbank gene 3212691 3213323 . - . ID=gene-PUW34_15675;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=PUW34_15675 CP118122.1 Protein Homology CDS 3212691 3213323 . - 0 ID=cds-WJG95939.1;Parent=gene-PUW34_15675;Dbxref=NCBI_GP:WJG95939.1;Name=WJG95939.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=PUW34_15675;product=ADP-ribose diphosphatase;protein_id=WJG95939.1;transl_table=11 CP118122.1 Genbank gene 3213524 3214999 . + . ID=gene-PUW34_15680;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=PUW34_15680 CP118122.1 Protein Homology CDS 3213524 3214999 . + 0 ID=cds-WJG95940.1;Parent=gene-PUW34_15680;Dbxref=NCBI_GP:WJG95940.1;Name=WJG95940.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=PUW34_15680;product=outer membrane channel protein TolC;protein_id=WJG95940.1;transl_table=11 CP118122.1 Genbank gene 3215212 3215883 . + . ID=gene-PUW34_15685;Name=PUW34_15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15685 CP118122.1 Protein Homology CDS 3215212 3215883 . + 0 ID=cds-WJG95941.1;Parent=gene-PUW34_15685;Dbxref=NCBI_GP:WJG95941.1;Name=WJG95941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=PUW34_15685;product=DUF1190 family protein;protein_id=WJG95941.1;transl_table=11 CP118122.1 Genbank gene 3215889 3217052 . + . ID=gene-PUW34_15690;Name=PUW34_15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15690 CP118122.1 Protein Homology CDS 3215889 3217052 . + 0 ID=cds-WJG95942.1;Parent=gene-PUW34_15690;Dbxref=NCBI_GP:WJG95942.1;Name=WJG95942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=PUW34_15690;product=glutathionylspermidine synthase family protein;protein_id=WJG95942.1;transl_table=11 CP118122.1 Genbank gene 3217114 3217902 . - . ID=gene-PUW34_15695;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=PUW34_15695 CP118122.1 Protein Homology CDS 3217114 3217902 . - 0 ID=cds-WJG95943.1;Parent=gene-PUW34_15695;Dbxref=NCBI_GP:WJG95943.1;Name=WJG95943.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=PUW34_15695;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WJG95943.1;transl_table=11 CP118122.1 Genbank gene 3218043 3218816 . + . ID=gene-PUW34_15700;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=PUW34_15700 CP118122.1 Protein Homology CDS 3218043 3218816 . + 0 ID=cds-WJG95944.1;Parent=gene-PUW34_15700;Dbxref=NCBI_GP:WJG95944.1;Name=WJG95944.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=PUW34_15700;product=zinc transporter ZupT;protein_id=WJG95944.1;transl_table=11 CP118122.1 Genbank gene 3218883 3219059 . - . ID=gene-PUW34_15705;Name=PUW34_15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15705 CP118122.1 Protein Homology CDS 3218883 3219059 . - 0 ID=cds-WJG95945.1;Parent=gene-PUW34_15705;Dbxref=NCBI_GP:WJG95945.1;Name=WJG95945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=PUW34_15705;product=hypothetical protein;protein_id=WJG95945.1;transl_table=11 CP118122.1 Genbank gene 3219459 3221255 . + . ID=gene-PUW34_15710;Name=PUW34_15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15710 CP118122.1 Protein Homology CDS 3219459 3221255 . + 0 ID=cds-WJG95946.1;Parent=gene-PUW34_15710;Dbxref=NCBI_GP:WJG95946.1;Name=WJG95946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=PUW34_15710;product=aryl-sulfate sulfotransferase;protein_id=WJG95946.1;transl_table=11 CP118122.1 Genbank gene 3221275 3221946 . + . ID=gene-PUW34_15715;Name=PUW34_15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15715 CP118122.1 Protein Homology CDS 3221275 3221946 . + 0 ID=cds-WJG95947.1;Parent=gene-PUW34_15715;Dbxref=NCBI_GP:WJG95947.1;Name=WJG95947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=PUW34_15715;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WJG95947.1;transl_table=11 CP118122.1 Genbank gene 3221961 3222638 . + . ID=gene-PUW34_15720;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=PUW34_15720 CP118122.1 Protein Homology CDS 3221961 3222638 . + 0 ID=cds-WJG95948.1;Parent=gene-PUW34_15720;Dbxref=NCBI_GP:WJG95948.1;Name=WJG95948.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=PUW34_15720;product=protein-disulfide oxidoreductase DsbI;protein_id=WJG95948.1;transl_table=11 CP118122.1 Genbank gene 3222808 3223461 . - . ID=gene-PUW34_15725;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=PUW34_15725 CP118122.1 Protein Homology CDS 3222808 3223461 . - 0 ID=cds-WJG95949.1;Parent=gene-PUW34_15725;Dbxref=NCBI_GP:WJG95949.1;Name=WJG95949.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=PUW34_15725;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WJG95949.1;transl_table=11 CP118122.1 cmsearch riboswitch 3223567 3223763 . - . ID=id-CP118122.1:3223567..3223763;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118122.1 Genbank gene 3223896 3224192 . + . ID=gene-PUW34_15730;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;locus_tag=PUW34_15730 CP118122.1 Protein Homology CDS 3223896 3224192 . + 0 ID=cds-WJG95950.1;Parent=gene-PUW34_15730;Dbxref=NCBI_GP:WJG95950.1;Name=WJG95950.1;gbkey=CDS;gene=ubiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=PUW34_15730;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WJG95950.1;transl_table=11 CP118122.1 Genbank gene 3224267 3224476 . - . ID=gene-PUW34_15735;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=PUW34_15735 CP118122.1 Protein Homology CDS 3224267 3224476 . - 0 ID=cds-WJG95951.1;Parent=gene-PUW34_15735;Dbxref=NCBI_GP:WJG95951.1;Name=WJG95951.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=PUW34_15735;product=cell surface composition regulator GlgS;protein_id=WJG95951.1;transl_table=11 CP118122.1 Genbank gene 3224734 3225354 . + . ID=gene-PUW34_15740;Name=PUW34_15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15740 CP118122.1 Protein Homology CDS 3224734 3225354 . + 0 ID=cds-WJG95952.1;Parent=gene-PUW34_15740;Dbxref=NCBI_GP:WJG95952.1;Name=WJG95952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=PUW34_15740;product=DUF1449 family protein;protein_id=WJG95952.1;transl_table=11 CP118122.1 Genbank gene 3225373 3227052 . + . ID=gene-PUW34_15745;Name=PUW34_15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15745 CP118122.1 Protein Homology CDS 3225373 3227052 . + 0 ID=cds-WJG95953.1;Parent=gene-PUW34_15745;Dbxref=NCBI_GP:WJG95953.1;Name=WJG95953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=PUW34_15745;product=flotillin family protein;protein_id=WJG95953.1;transl_table=11 CP118122.1 Genbank gene 3227292 3227351 . + . ID=gene-PUW34_15750;Name=PUW34_15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15750 CP118122.1 Protein Homology CDS 3227292 3227351 . + 0 ID=cds-WJG99016.1;Parent=gene-PUW34_15750;Dbxref=NCBI_GP:WJG99016.1;Name=WJG99016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=PUW34_15750;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WJG99016.1;transl_table=11 CP118122.1 Genbank gene 3227511 3228944 . - . ID=gene-PUW34_15755;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=PUW34_15755 CP118122.1 Protein Homology CDS 3227511 3228944 . - 0 ID=cds-WJG95954.1;Parent=gene-PUW34_15755;Dbxref=NCBI_GP:WJG95954.1;Name=WJG95954.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=PUW34_15755;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WJG95954.1;transl_table=11 CP118122.1 Genbank pseudogene 3228992 3231833 . - . ID=gene-PUW34_15760;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=pseudogene;locus_tag=PUW34_15760;pseudo=true CP118122.1 Protein Homology CDS 3228992 3231833 . - 0 ID=cds-PUW34_15760;Parent=gene-PUW34_15760;Note=frameshifted;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=PUW34_15760;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3231951 3233252 . - . ID=gene-PUW34_15765;Name=PUW34_15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15765 CP118122.1 Protein Homology CDS 3231951 3233252 . - 0 ID=cds-WJG95955.1;Parent=gene-PUW34_15765;Dbxref=NCBI_GP:WJG95955.1;Name=WJG95955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=PUW34_15765;product=inorganic triphosphatase;protein_id=WJG95955.1;transl_table=11 CP118122.1 Genbank gene 3233494 3234108 . + . ID=gene-PUW34_15770;Name=PUW34_15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15770 CP118122.1 Protein Homology CDS 3233494 3234108 . + 0 ID=cds-WJG95956.1;Parent=gene-PUW34_15770;Dbxref=NCBI_GP:WJG95956.1;Name=WJG95956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=PUW34_15770;product=TIGR04211 family SH3 domain-containing protein;protein_id=WJG95956.1;transl_table=11 CP118122.1 Genbank gene 3234171 3235412 . + . ID=gene-PUW34_15775;Name=PUW34_15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15775 CP118122.1 Protein Homology CDS 3234171 3235412 . + 0 ID=cds-WJG95957.1;Parent=gene-PUW34_15775;Dbxref=NCBI_GP:WJG95957.1;Name=WJG95957.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=PUW34_15775;product=multifunctional CCA addition/repair protein;protein_id=WJG95957.1;transl_table=11 CP118122.1 Genbank gene 3235516 3236337 . - . ID=gene-PUW34_15780;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=PUW34_15780 CP118122.1 Protein Homology CDS 3235516 3236337 . - 0 ID=cds-WJG95958.1;Parent=gene-PUW34_15780;Dbxref=NCBI_GP:WJG95958.1;Name=WJG95958.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=PUW34_15780;product=undecaprenyl-diphosphate phosphatase;protein_id=WJG95958.1;transl_table=11 CP118122.1 Genbank gene 3236435 3236794 . - . ID=gene-PUW34_15785;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=PUW34_15785 CP118122.1 Protein Homology CDS 3236435 3236794 . - 0 ID=cds-WJG95959.1;Parent=gene-PUW34_15785;Dbxref=NCBI_GP:WJG95959.1;Name=WJG95959.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=PUW34_15785;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WJG95959.1;transl_table=11 CP118122.1 Genbank gene 3236901 3237512 . + . ID=gene-PUW34_15790;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=PUW34_15790 CP118122.1 Protein Homology CDS 3236901 3237512 . + 0 ID=cds-WJG95960.1;Parent=gene-PUW34_15790;Dbxref=NCBI_GP:WJG95960.1;Name=WJG95960.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=PUW34_15790;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WJG95960.1;transl_table=11 CP118122.1 Genbank pseudogene 3237511 3237639 . + . ID=gene-PUW34_15795;Name=PUW34_15795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15795;pseudo=true CP118122.1 Protein Homology CDS 3237511 3237639 . + 0 ID=cds-PUW34_15795;Parent=gene-PUW34_15795;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=PUW34_15795;product=fumarate hydratase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3237762 3238775 . - . ID=gene-PUW34_15800;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=PUW34_15800 CP118122.1 Protein Homology CDS 3237762 3238775 . - 0 ID=cds-WJG95961.1;Parent=gene-PUW34_15800;Dbxref=NCBI_GP:WJG95961.1;Name=WJG95961.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=PUW34_15800;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WJG95961.1;transl_table=11 CP118122.1 Genbank gene 3239003 3239218 . + . ID=gene-PUW34_15805;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=PUW34_15805 CP118122.1 Protein Homology CDS 3239003 3239218 . + 0 ID=cds-WJG95962.1;Parent=gene-PUW34_15805;Dbxref=NCBI_GP:WJG95962.1;Name=WJG95962.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=PUW34_15805;product=30S ribosomal protein S21;protein_id=WJG95962.1;transl_table=11 CP118122.1 Genbank gene 3239453 3241198 . + . ID=gene-PUW34_15810;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=PUW34_15810 CP118122.1 Protein Homology CDS 3239453 3241198 . + 0 ID=cds-WJG95963.1;Parent=gene-PUW34_15810;Dbxref=NCBI_GP:WJG95963.1;Name=WJG95963.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=PUW34_15810;product=DNA primase;protein_id=WJG95963.1;transl_table=11 CP118122.1 Genbank gene 3241213 3243195 . + . ID=gene-PUW34_15815;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=PUW34_15815 CP118122.1 Protein Homology CDS 3241213 3243195 . + 0 ID=cds-WJG95964.1;Parent=gene-PUW34_15815;Dbxref=NCBI_GP:WJG95964.1;Name=WJG95964.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=PUW34_15815;product=RNA polymerase sigma factor RpoD;protein_id=WJG95964.1;transl_table=11 CP118122.1 Genbank gene 3243319 3243825 . - . ID=gene-PUW34_15820;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=PUW34_15820 CP118122.1 Protein Homology CDS 3243319 3243825 . - 0 ID=cds-WJG95965.1;Parent=gene-PUW34_15820;Dbxref=NCBI_GP:WJG95965.1;Name=WJG95965.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=PUW34_15820;product=G/U mismatch-specific DNA glycosylase;protein_id=WJG95965.1;transl_table=11 CP118122.1 Genbank gene 3243951 3244026 . + . ID=gene-PUW34_15825;Name=PUW34_15825;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_15825 CP118122.1 tRNAscan-SE tRNA 3243951 3244026 . + . ID=rna-PUW34_15825;Parent=gene-PUW34_15825;anticodon=(pos:3243984..3243986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_15825;product=tRNA-Ile CP118122.1 tRNAscan-SE exon 3243951 3244026 . + . ID=exon-PUW34_15825-1;Parent=rna-PUW34_15825;anticodon=(pos:3243984..3243986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_15825;product=tRNA-Ile CP118122.1 Genbank gene 3244106 3244873 . - . ID=gene-PUW34_15830;Name=PUW34_15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15830 CP118122.1 Protein Homology CDS 3244106 3244873 . - 0 ID=cds-WJG95966.1;Parent=gene-PUW34_15830;Dbxref=NCBI_GP:WJG95966.1;Name=WJG95966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=PUW34_15830;product=siderophore-interacting protein;protein_id=WJG95966.1;transl_table=11 CP118122.1 Genbank pseudogene 3245105 3245751 . + . ID=gene-PUW34_15835;Name=PUW34_15835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15835;pseudo=true CP118122.1 Protein Homology CDS 3245105 3245751 . + 0 ID=cds-PUW34_15835;Parent=gene-PUW34_15835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=PUW34_15835;product=PadR family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3245748 3247316 . - . ID=gene-PUW34_15840;Name=PUW34_15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15840 CP118122.1 Protein Homology CDS 3245748 3247316 . - 0 ID=cds-WJG95967.1;Parent=gene-PUW34_15840;Dbxref=NCBI_GP:WJG95967.1;Name=WJG95967.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=PUW34_15840;product=methyl-accepting chemotaxis protein;protein_id=WJG95967.1;transl_table=11 CP118122.1 Genbank gene 3247703 3249223 . - . ID=gene-PUW34_15845;Name=PUW34_15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15845 CP118122.1 Protein Homology CDS 3247703 3249223 . - 0 ID=cds-WJG95968.1;Parent=gene-PUW34_15845;Dbxref=NCBI_GP:WJG95968.1;Name=WJG95968.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=PUW34_15845;product=methyl-accepting chemotaxis protein;protein_id=WJG95968.1;transl_table=11 CP118122.1 Genbank gene 3249653 3251032 . + . ID=gene-PUW34_15850;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=PUW34_15850 CP118122.1 Protein Homology CDS 3249653 3251032 . + 0 ID=cds-WJG95969.1;Parent=gene-PUW34_15850;Dbxref=NCBI_GP:WJG95969.1;Name=WJG95969.1;Ontology_term=GO:0009447,GO:0033094;gbkey=CDS;gene=ygjG;go_function=butane-1%2C4-diamine:2-oxoglutarate aminotransferase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=PUW34_15850;product=putrescine aminotransferase;protein_id=WJG95969.1;transl_table=11 CP118122.1 Genbank gene 3251203 3253221 . + . ID=gene-PUW34_15855;Name=PUW34_15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15855 CP118122.1 Protein Homology CDS 3251203 3253221 . + 0 ID=cds-WJG95970.1;Parent=gene-PUW34_15855;Dbxref=NCBI_GP:WJG95970.1;Name=WJG95970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=PUW34_15855;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WJG95970.1;transl_table=11 CP118122.1 Genbank gene 3253302 3254438 . - . ID=gene-PUW34_15860;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=PUW34_15860 CP118122.1 Protein Homology CDS 3253302 3254438 . - 0 ID=cds-WJG95971.1;Parent=gene-PUW34_15860;Dbxref=NCBI_GP:WJG95971.1;Name=WJG95971.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=PUW34_15860;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WJG95971.1;transl_table=11 CP118122.1 Genbank gene 3254524 3255021 . + . ID=gene-PUW34_15865;Name=PUW34_15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15865 CP118122.1 Protein Homology CDS 3254524 3255021 . + 0 ID=cds-WJG95972.1;Parent=gene-PUW34_15865;Dbxref=NCBI_GP:WJG95972.1;Name=WJG95972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=PUW34_15865;product=M48 family metallopeptidase;protein_id=WJG95972.1;transl_table=11 CP118122.1 Genbank pseudogene 3255173 3255864 . + . ID=gene-PUW34_15870;Name=PUW34_15870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15870;pseudo=true CP118122.1 Protein Homology CDS 3255173 3255864 . + 0 ID=cds-PUW34_15870;Parent=gene-PUW34_15870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=PUW34_15870;product=vancomycin high temperature exclusion protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3255953 3256951 . + . ID=gene-PUW34_15875;Name=PUW34_15875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_15875;pseudo=true CP118122.1 Protein Homology CDS 3255953 3256951 . + 0 ID=cds-PUW34_15875;Parent=gene-PUW34_15875;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=PUW34_15875;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3257221 3258189 . + . ID=gene-PUW34_15880;Name=PUW34_15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15880 CP118122.1 Protein Homology CDS 3257221 3258189 . + 0 ID=cds-WJG99017.1;Parent=gene-PUW34_15880;Dbxref=NCBI_GP:WJG99017.1;Name=WJG99017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=PUW34_15880;product=TerC family protein;protein_id=WJG99017.1;transl_table=11 CP118122.1 Genbank pseudogene 3258444 3259688 . + . ID=gene-PUW34_15885;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=pseudogene;locus_tag=PUW34_15885;pseudo=true CP118122.1 Protein Homology CDS 3258444 3259688 . + 0 ID=cds-PUW34_15885;Parent=gene-PUW34_15885;Note=internal stop;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=PUW34_15885;product=serine/threonine transporter SstT;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3260138 3260800 . + . ID=gene-PUW34_15890;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=PUW34_15890 CP118122.1 Protein Homology CDS 3260138 3260800 . + 0 ID=cds-WJG95973.1;Parent=gene-PUW34_15890;Dbxref=NCBI_GP:WJG95973.1;Name=WJG95973.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=PUW34_15890;product=DedA family general envelope maintenance protein YqjA;protein_id=WJG95973.1;transl_table=11 CP118122.1 Genbank gene 3260804 3261187 . + . ID=gene-PUW34_15895;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=PUW34_15895 CP118122.1 Protein Homology CDS 3260804 3261187 . + 0 ID=cds-WJG95974.1;Parent=gene-PUW34_15895;Dbxref=NCBI_GP:WJG95974.1;Name=WJG95974.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=PUW34_15895;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WJG95974.1;transl_table=11 CP118122.1 Genbank gene 3261332 3261700 . + . ID=gene-PUW34_15900;Name=PUW34_15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15900 CP118122.1 Protein Homology CDS 3261332 3261700 . + 0 ID=cds-WJG95975.1;Parent=gene-PUW34_15900;Dbxref=NCBI_GP:WJG95975.1;Name=WJG95975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=PUW34_15900;product=DUF1090 domain-containing protein;protein_id=WJG95975.1;transl_table=11 CP118122.1 Genbank gene 3261742 3262047 . + . ID=gene-PUW34_15905;Name=PUW34_15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15905 CP118122.1 Protein Homology CDS 3261742 3262047 . + 0 ID=cds-WJG95976.1;Parent=gene-PUW34_15905;Dbxref=NCBI_GP:WJG95976.1;Name=WJG95976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=PUW34_15905;product=YqjD family protein;protein_id=WJG95976.1;transl_table=11 CP118122.1 Genbank gene 3262050 3262448 . + . ID=gene-PUW34_15910;Name=PUW34_15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15910 CP118122.1 Protein Homology CDS 3262050 3262448 . + 0 ID=cds-WJG95977.1;Parent=gene-PUW34_15910;Dbxref=NCBI_GP:WJG95977.1;Name=WJG95977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=PUW34_15910;product=phage holin family protein;protein_id=WJG95977.1;transl_table=11 CP118122.1 Genbank gene 3262445 3262744 . + . ID=gene-PUW34_15915;Name=PUW34_15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15915 CP118122.1 Protein Homology CDS 3262445 3262744 . + 0 ID=cds-WJG95978.1;Parent=gene-PUW34_15915;Dbxref=NCBI_GP:WJG95978.1;Name=WJG95978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=PUW34_15915;product=YqjK-like family protein;protein_id=WJG95978.1;transl_table=11 CP118122.1 Genbank gene 3262992 3263384 . + . ID=gene-PUW34_15920;Name=PUW34_15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15920 CP118122.1 Protein Homology CDS 3262992 3263384 . + 0 ID=cds-WJG95979.1;Parent=gene-PUW34_15920;Dbxref=NCBI_GP:WJG95979.1;Name=WJG95979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=PUW34_15920;product=DoxX family protein;protein_id=WJG95979.1;transl_table=11 CP118122.1 Genbank gene 3263452 3264438 . + . ID=gene-PUW34_15925;Name=PUW34_15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15925 CP118122.1 Protein Homology CDS 3263452 3264438 . + 0 ID=cds-WJG95980.1;Parent=gene-PUW34_15925;Dbxref=NCBI_GP:WJG95980.1;Name=WJG95980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=PUW34_15925;product=glutathione S-transferase family protein;protein_id=WJG95980.1;transl_table=11 CP118122.1 Genbank gene 3264562 3264927 . + . ID=gene-PUW34_15930;Name=PUW34_15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15930 CP118122.1 Protein Homology CDS 3264562 3264927 . + 0 ID=cds-WJG95981.1;Parent=gene-PUW34_15930;Dbxref=NCBI_GP:WJG95981.1;Name=WJG95981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=PUW34_15930;product=DUF805 domain-containing protein;protein_id=WJG95981.1;transl_table=11 CP118122.1 Genbank pseudogene 3264966 3265861 . - . ID=gene-PUW34_15935;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=pseudogene;locus_tag=PUW34_15935;pseudo=true CP118122.1 Protein Homology CDS 3264966 3265861 . - 0 ID=cds-PUW34_15935;Parent=gene-PUW34_15935;Note=frameshifted;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=PUW34_15935;product=DNA-binding transcriptional regulator YhaJ;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3265966 3266667 . + . ID=gene-PUW34_15940;Name=PUW34_15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15940 CP118122.1 Protein Homology CDS 3265966 3266667 . + 0 ID=cds-WJG95982.1;Parent=gene-PUW34_15940;Dbxref=NCBI_GP:WJG95982.1;Name=WJG95982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=PUW34_15940;product=pirin family protein;protein_id=WJG95982.1;transl_table=11 CP118122.1 Genbank gene 3266691 3266855 . + . ID=gene-PUW34_15945;Name=PUW34_15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15945 CP118122.1 Protein Homology CDS 3266691 3266855 . + 0 ID=cds-WJG95983.1;Parent=gene-PUW34_15945;Dbxref=NCBI_GP:WJG95983.1;Name=WJG95983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=PUW34_15945;product=hypothetical protein;protein_id=WJG95983.1;transl_table=11 CP118122.1 Genbank gene 3266968 3268278 . - . ID=gene-PUW34_15950;Name=PUW34_15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15950 CP118122.1 Protein Homology CDS 3266968 3268278 . - 0 ID=cds-WJG95984.1;Parent=gene-PUW34_15950;Dbxref=NCBI_GP:WJG95984.1;Name=WJG95984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=PUW34_15950;product=serine dehydratase subunit alpha family protein;protein_id=WJG95984.1;transl_table=11 CP118122.1 Genbank gene 3268304 3269635 . - . ID=gene-PUW34_15955;Name=PUW34_15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_15955 CP118122.1 Protein Homology CDS 3268304 3269635 . - 0 ID=cds-WJG95985.1;Parent=gene-PUW34_15955;Dbxref=NCBI_GP:WJG95985.1;Name=WJG95985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=PUW34_15955;product=amino acid permease;protein_id=WJG95985.1;transl_table=11 CP118122.1 Genbank pseudogene 3269950 3271313 . - . ID=gene-PUW34_15960;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=pseudogene;locus_tag=PUW34_15960;pseudo=true CP118122.1 Protein Homology CDS 3269950 3271313 . - 0 ID=cds-PUW34_15960;Parent=gene-PUW34_15960;Note=frameshifted;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=PUW34_15960;product=L-serine ammonia-lyase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3271383 3273676 . - . ID=gene-PUW34_15965;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=PUW34_15965;pseudo=true CP118122.1 Protein Homology CDS 3271383 3273676 . - 0 ID=cds-PUW34_15965;Parent=gene-PUW34_15965;Note=frameshifted;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=PUW34_15965;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3273709 3274917 . - . ID=gene-PUW34_15970;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=PUW34_15970 CP118122.1 Protein Homology CDS 3273709 3274917 . - 0 ID=cds-WJG95986.1;Parent=gene-PUW34_15970;Dbxref=NCBI_GP:WJG95986.1;Name=WJG95986.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=PUW34_15970;product=propionate kinase;protein_id=WJG95986.1;transl_table=11 CP118122.1 Genbank gene 3274984 3276315 . - . ID=gene-PUW34_15975;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=PUW34_15975 CP118122.1 Protein Homology CDS 3274984 3276315 . - 0 ID=cds-WJG95987.1;Parent=gene-PUW34_15975;Dbxref=NCBI_GP:WJG95987.1;Name=WJG95987.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=PUW34_15975;product=threonine/serine transporter TdcC;protein_id=WJG95987.1;transl_table=11 CP118122.1 Genbank gene 3276336 3277325 . - . ID=gene-PUW34_15980;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=PUW34_15980 CP118122.1 Protein Homology CDS 3276336 3277325 . - 0 ID=cds-WJG95988.1;Parent=gene-PUW34_15980;Dbxref=NCBI_GP:WJG95988.1;Name=WJG95988.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=L-threonine ammonia-lyase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=PUW34_15980;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WJG95988.1;transl_table=11 CP118122.1 Genbank gene 3277423 3278361 . - . ID=gene-PUW34_15985;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=PUW34_15985 CP118122.1 Protein Homology CDS 3277423 3278361 . - 0 ID=cds-WJG95989.1;Parent=gene-PUW34_15985;Dbxref=NCBI_GP:WJG95989.1;Name=WJG95989.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=PUW34_15985;product=transcriptional regulator TdcA;protein_id=WJG95989.1;transl_table=11 CP118122.1 Genbank gene 3279073 3279447 . - . ID=gene-PUW34_15990;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=PUW34_15990 CP118122.1 cmsearch RNase_P_RNA 3279073 3279447 . - . ID=rna-PUW34_15990;Parent=gene-PUW34_15990;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_15990;product=RNase P RNA component class A CP118122.1 cmsearch exon 3279073 3279447 . - . ID=exon-PUW34_15990-1;Parent=rna-PUW34_15990;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_15990;product=RNase P RNA component class A CP118122.1 Genbank gene 3279480 3280625 . - . ID=gene-PUW34_15995;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=PUW34_15995 CP118122.1 Protein Homology CDS 3279480 3280625 . - 0 ID=cds-WJG95990.1;Parent=gene-PUW34_15995;Dbxref=NCBI_GP:WJG95990.1;Name=WJG95990.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=PUW34_15995;product=glycerate 2-kinase;protein_id=WJG95990.1;transl_table=11 CP118122.1 Genbank gene 3280723 3281613 . - . ID=gene-PUW34_16000;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=PUW34_16000 CP118122.1 Protein Homology CDS 3280723 3281613 . - 0 ID=cds-WJG95991.1;Parent=gene-PUW34_16000;Dbxref=NCBI_GP:WJG95991.1;Name=WJG95991.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=PUW34_16000;product=2-hydroxy-3-oxopropionate reductase;protein_id=WJG95991.1;transl_table=11 CP118122.1 Genbank gene 3281639 3282409 . - . ID=gene-PUW34_16005;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=PUW34_16005 CP118122.1 Protein Homology CDS 3281639 3282409 . - 0 ID=cds-WJG95992.1;Parent=gene-PUW34_16005;Dbxref=NCBI_GP:WJG95992.1;Name=WJG95992.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=PUW34_16005;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WJG95992.1;transl_table=11 CP118122.1 Genbank gene 3282939 3284510 . + . ID=gene-PUW34_16010;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=PUW34_16010 CP118122.1 Protein Homology CDS 3282939 3284510 . + 0 ID=cds-WJG95993.1;Parent=gene-PUW34_16010;Dbxref=NCBI_GP:WJG95993.1;Name=WJG95993.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=PUW34_16010;product=galactarate dehydratase;protein_id=WJG95993.1;transl_table=11 CP118122.1 Genbank gene 3284768 3285622 . + . ID=gene-PUW34_16015;Name=PUW34_16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16015 CP118122.1 Protein Homology CDS 3284768 3285622 . + 0 ID=cds-WJG95994.1;Parent=gene-PUW34_16015;Dbxref=NCBI_GP:WJG95994.1;Name=WJG95994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=PUW34_16015;product=tagatose bisphosphate family class II aldolase;protein_id=WJG95994.1;transl_table=11 CP118122.1 Genbank gene 3285741 3287012 . + . ID=gene-PUW34_16020;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=PUW34_16020 CP118122.1 Protein Homology CDS 3285741 3287012 . + 0 ID=cds-WJG95995.1;Parent=gene-PUW34_16020;Dbxref=NCBI_GP:WJG95995.1;Name=WJG95995.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=PUW34_16020;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WJG95995.1;transl_table=11 CP118122.1 Genbank gene 3287027 3287491 . + . ID=gene-PUW34_16025;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=PUW34_16025 CP118122.1 Protein Homology CDS 3287027 3287491 . + 0 ID=cds-WJG95996.1;Parent=gene-PUW34_16025;Dbxref=NCBI_GP:WJG95996.1;Name=WJG95996.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=PUW34_16025;product=PTS galactitol transporter subunit IIA;protein_id=WJG95996.1;transl_table=11 CP118122.1 Genbank gene 3287522 3287806 . + . ID=gene-PUW34_16030;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=PUW34_16030 CP118122.1 Protein Homology CDS 3287522 3287806 . + 0 ID=cds-WJG95997.1;Parent=gene-PUW34_16030;Dbxref=NCBI_GP:WJG95997.1;Name=WJG95997.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=PUW34_16030;product=PTS galactitol transporter subunit IIB;protein_id=WJG95997.1;transl_table=11 CP118122.1 Genbank gene 3287810 3289183 . + . ID=gene-PUW34_16035;Name=PUW34_16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16035 CP118122.1 Protein Homology CDS 3287810 3289183 . + 0 ID=cds-WJG95998.1;Parent=gene-PUW34_16035;Dbxref=NCBI_GP:WJG95998.1;Name=WJG95998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=PUW34_16035;product=PTS galactitol transporter subunit IIC;protein_id=WJG95998.1;transl_table=11 CP118122.1 Genbank gene 3289227 3290270 . + . ID=gene-PUW34_16040;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=PUW34_16040 CP118122.1 Protein Homology CDS 3289227 3290270 . + 0 ID=cds-WJG95999.1;Parent=gene-PUW34_16040;Dbxref=NCBI_GP:WJG95999.1;Name=WJG95999.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=PUW34_16040;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WJG95999.1;transl_table=11 CP118122.1 Genbank gene 3290381 3291154 . + . ID=gene-PUW34_16045;Name=PUW34_16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16045 CP118122.1 Protein Homology CDS 3290381 3291154 . + 0 ID=cds-WJG96000.1;Parent=gene-PUW34_16045;Dbxref=NCBI_GP:WJG96000.1;Name=WJG96000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=PUW34_16045;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG96000.1;transl_table=11 CP118122.1 Genbank gene 3291312 3292175 . - . ID=gene-PUW34_16050;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=PUW34_16050 CP118122.1 Protein Homology CDS 3291312 3292175 . - 0 ID=cds-WJG96001.1;Parent=gene-PUW34_16050;Dbxref=NCBI_GP:WJG96001.1;Name=WJG96001.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=PUW34_16050;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WJG96001.1;transl_table=11 CP118122.1 Genbank gene 3292239 3294281 . + . ID=gene-PUW34_16055;Name=PUW34_16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16055 CP118122.1 Protein Homology CDS 3292239 3294281 . + 0 ID=cds-WJG96002.1;Parent=gene-PUW34_16055;Dbxref=NCBI_GP:WJG96002.1;Name=WJG96002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=PUW34_16055;product=penicillin-binding protein activator;protein_id=WJG96002.1;transl_table=11 CP118122.1 Genbank gene 3294239 3294634 . + . ID=gene-PUW34_16060;Name=PUW34_16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16060 CP118122.1 Protein Homology CDS 3294239 3294634 . + 0 ID=cds-WJG96003.1;Parent=gene-PUW34_16060;Dbxref=NCBI_GP:WJG96003.1;Name=WJG96003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=PUW34_16060;product=YraN family protein;protein_id=WJG96003.1;transl_table=11 CP118122.1 Genbank gene 3294656 3295246 . + . ID=gene-PUW34_16065;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=PUW34_16065 CP118122.1 Protein Homology CDS 3294656 3295246 . + 0 ID=cds-WJG96004.1;Parent=gene-PUW34_16065;Dbxref=NCBI_GP:WJG96004.1;Name=WJG96004.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=PUW34_16065;product=DnaA initiator-associating protein DiaA;protein_id=WJG96004.1;transl_table=11 CP118122.1 Genbank gene 3295256 3295831 . + . ID=gene-PUW34_16070;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=PUW34_16070 CP118122.1 Protein Homology CDS 3295256 3295831 . + 0 ID=cds-WJG96005.1;Parent=gene-PUW34_16070;Dbxref=NCBI_GP:WJG96005.1;Name=WJG96005.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=PUW34_16070;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WJG96005.1;transl_table=11 CP118122.1 Genbank gene 3295898 3296533 . - . ID=gene-PUW34_16075;Name=PUW34_16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16075 CP118122.1 Protein Homology CDS 3295898 3296533 . - 0 ID=cds-WJG96006.1;Parent=gene-PUW34_16075;Dbxref=NCBI_GP:WJG96006.1;Name=WJG96006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=PUW34_16075;product=NAD(P)H-binding protein;protein_id=WJG96006.1;transl_table=11 CP118122.1 Genbank gene 3296664 3297182 . + . ID=gene-PUW34_16080;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=PUW34_16080 CP118122.1 Protein Homology CDS 3296664 3297182 . + 0 ID=cds-WJG96007.1;Parent=gene-PUW34_16080;Dbxref=NCBI_GP:WJG96007.1;Name=WJG96007.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=PUW34_16080;product=protein/nucleic acid deglycase;protein_id=WJG96007.1;transl_table=11 CP118122.1 Genbank gene 3297162 3297605 . - . ID=gene-PUW34_16085;Name=PUW34_16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16085 CP118122.1 Protein Homology CDS 3297162 3297605 . - 0 ID=cds-WJG96008.1;Parent=gene-PUW34_16085;Dbxref=NCBI_GP:WJG96008.1;Name=WJG96008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=PUW34_16085;product=YhbP family protein;protein_id=WJG96008.1;transl_table=11 CP118122.1 Genbank gene 3297643 3297960 . + . ID=gene-PUW34_16090;Name=PUW34_16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16090 CP118122.1 Protein Homology CDS 3297643 3297960 . + 0 ID=cds-WJG96009.1;Parent=gene-PUW34_16090;Dbxref=NCBI_GP:WJG96009.1;Name=WJG96009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=PUW34_16090;product=GIY-YIG nuclease family protein;protein_id=WJG96009.1;transl_table=11 CP118122.1 Genbank gene 3297947 3298450 . - . ID=gene-PUW34_16095;Name=PUW34_16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16095 CP118122.1 Protein Homology CDS 3297947 3298450 . - 0 ID=cds-WJG96010.1;Parent=gene-PUW34_16095;Dbxref=NCBI_GP:WJG96010.1;Name=WJG96010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=PUW34_16095;product=N-acetyltransferase;protein_id=WJG96010.1;transl_table=11 CP118122.1 Genbank gene 3298444 3298968 . - . ID=gene-PUW34_16100;Name=PUW34_16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16100 CP118122.1 Protein Homology CDS 3298444 3298968 . - 0 ID=cds-WJG96011.1;Parent=gene-PUW34_16100;Dbxref=NCBI_GP:WJG96011.1;Name=WJG96011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=PUW34_16100;product=SCP2 domain-containing protein;protein_id=WJG96011.1;transl_table=11 CP118122.1 Genbank gene 3299185 3300180 . + . ID=gene-PUW34_16105;Name=PUW34_16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16105 CP118122.1 Protein Homology CDS 3299185 3300180 . + 0 ID=cds-WJG96012.1;Parent=gene-PUW34_16105;Dbxref=NCBI_GP:WJG96012.1;Name=WJG96012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=PUW34_16105;product=U32 family peptidase;protein_id=WJG96012.1;transl_table=11 CP118122.1 Genbank gene 3300171 3301067 . + . ID=gene-PUW34_16110;Name=PUW34_16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16110 CP118122.1 Protein Homology CDS 3300171 3301067 . + 0 ID=cds-WJG96013.1;Parent=gene-PUW34_16110;Dbxref=NCBI_GP:WJG96013.1;Name=WJG96013.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462188.3;locus_tag=PUW34_16110;product=U32 family peptidase;protein_id=WJG96013.1;transl_table=11 CP118122.1 Genbank gene 3301245 3302252 . + . ID=gene-PUW34_16115;Name=PUW34_16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16115 CP118122.1 Protein Homology CDS 3301245 3302252 . + 0 ID=cds-WJG96014.1;Parent=gene-PUW34_16115;Dbxref=NCBI_GP:WJG96014.1;Name=WJG96014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=PUW34_16115;product=LLM class flavin-dependent oxidoreductase;protein_id=WJG96014.1;transl_table=11 CP118122.1 Genbank gene 3302230 3302949 . - . ID=gene-PUW34_16120;Name=PUW34_16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16120 CP118122.1 Protein Homology CDS 3302230 3302949 . - 0 ID=cds-WJG96015.1;Parent=gene-PUW34_16120;Dbxref=NCBI_GP:WJG96015.1;Name=WJG96015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=PUW34_16120;product=murein L%2CD-transpeptidase;protein_id=WJG96015.1;transl_table=11 CP118122.1 Genbank gene 3303108 3303638 . + . ID=gene-PUW34_16125;Name=PUW34_16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16125 CP118122.1 Protein Homology CDS 3303108 3303638 . + 0 ID=cds-WJG96016.1;Parent=gene-PUW34_16125;Dbxref=NCBI_GP:WJG96016.1;Name=WJG96016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=PUW34_16125;product=cytoplasmic protein;protein_id=WJG96016.1;transl_table=11 CP118122.1 Genbank gene 3303699 3304943 . - . ID=gene-PUW34_16130;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=PUW34_16130 CP118122.1 Protein Homology CDS 3303699 3304943 . - 0 ID=cds-WJG96017.1;Parent=gene-PUW34_16130;Dbxref=NCBI_GP:WJG96017.1;Name=WJG96017.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=PUW34_16130;product=tryptophan permease;protein_id=WJG96017.1;transl_table=11 CP118122.1 Genbank gene 3305097 3306953 . - . ID=gene-PUW34_16135;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=PUW34_16135 CP118122.1 Protein Homology CDS 3305097 3306953 . - 0 ID=cds-WJG96018.1;Parent=gene-PUW34_16135;Dbxref=NCBI_GP:WJG96018.1;Name=WJG96018.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=PUW34_16135;product=ATP-dependent RNA helicase DeaD;protein_id=WJG96018.1;transl_table=11 CP118122.1 Genbank gene 3306946 3307026 . - . ID=gene-PUW34_16140;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=PUW34_16140 CP118122.1 Protein Homology CDS 3306946 3307026 . - 0 ID=cds-WJG99018.1;Parent=gene-PUW34_16140;Dbxref=NCBI_GP:WJG99018.1;Name=WJG99018.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=PUW34_16140;product=protein YrbN;protein_id=WJG99018.1;transl_table=11 CP118122.1 Genbank gene 3307132 3308016 . - . ID=gene-PUW34_16145;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=PUW34_16145 CP118122.1 Protein Homology CDS 3307132 3308016 . - 0 ID=cds-WJG96019.1;Parent=gene-PUW34_16145;Dbxref=NCBI_GP:WJG96019.1;Name=WJG96019.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=PUW34_16145;product=lipoprotein NlpI;protein_id=WJG96019.1;transl_table=11 CP118122.1 Genbank gene 3308126 3310261 . - . ID=gene-PUW34_16150;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=PUW34_16150 CP118122.1 Protein Homology CDS 3308126 3310261 . - 0 ID=cds-WJG99019.1;Parent=gene-PUW34_16150;Dbxref=NCBI_GP:WJG99019.1;Name=WJG99019.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=PUW34_16150;product=polyribonucleotide nucleotidyltransferase;protein_id=WJG99019.1;transl_table=11 CP118122.1 Genbank gene 3310503 3310772 . - . ID=gene-PUW34_16155;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=PUW34_16155 CP118122.1 Protein Homology CDS 3310503 3310772 . - 0 ID=cds-WJG96020.1;Parent=gene-PUW34_16155;Dbxref=NCBI_GP:WJG96020.1;Name=WJG96020.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=PUW34_16155;product=30S ribosomal protein S15;protein_id=WJG96020.1;transl_table=11 CP118122.1 Genbank gene 3310923 3311867 . - . ID=gene-PUW34_16160;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=PUW34_16160 CP118122.1 Protein Homology CDS 3310923 3311867 . - 0 ID=cds-WJG96021.1;Parent=gene-PUW34_16160;Dbxref=NCBI_GP:WJG96021.1;Name=WJG96021.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=PUW34_16160;product=tRNA pseudouridine(55) synthase TruB;protein_id=WJG96021.1;transl_table=11 CP118122.1 Genbank gene 3311867 3312268 . - . ID=gene-PUW34_16165;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=PUW34_16165 CP118122.1 Protein Homology CDS 3311867 3312268 . - 0 ID=cds-WJG96022.1;Parent=gene-PUW34_16165;Dbxref=NCBI_GP:WJG96022.1;Name=WJG96022.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=PUW34_16165;product=30S ribosome-binding factor RbfA;protein_id=WJG96022.1;transl_table=11 CP118122.1 Genbank gene 3312489 3315167 . - . ID=gene-PUW34_16170;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=PUW34_16170 CP118122.1 Protein Homology CDS 3312489 3315167 . - 0 ID=cds-WJG96023.1;Parent=gene-PUW34_16170;Dbxref=NCBI_GP:WJG96023.1;Name=WJG96023.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=PUW34_16170;product=translation initiation factor IF-2;protein_id=WJG96023.1;transl_table=11 CP118122.1 Genbank pseudogene 3315192 3316693 . - . ID=gene-PUW34_16175;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=PUW34_16175;pseudo=true CP118122.1 Protein Homology CDS 3315192 3316693 . - 0 ID=cds-PUW34_16175;Parent=gene-PUW34_16175;Note=frameshifted;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=PUW34_16175;product=transcription termination factor NusA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3316721 3317173 . - . ID=gene-PUW34_16180;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=PUW34_16180 CP118122.1 Protein Homology CDS 3316721 3317173 . - 0 ID=cds-WJG96024.1;Parent=gene-PUW34_16180;Dbxref=NCBI_GP:WJG96024.1;Name=WJG96024.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=PUW34_16180;product=ribosome maturation factor RimP;protein_id=WJG96024.1;transl_table=11 CP118122.1 Genbank gene 3317381 3317457 . - . ID=gene-PUW34_16185;Name=PUW34_16185;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_16185 CP118122.1 tRNAscan-SE tRNA 3317381 3317457 . - . ID=rna-PUW34_16185;Parent=gene-PUW34_16185;anticodon=(pos:complement(3317421..3317423));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16185;product=tRNA-Met CP118122.1 tRNAscan-SE exon 3317381 3317457 . - . ID=exon-PUW34_16185-1;Parent=rna-PUW34_16185;anticodon=(pos:complement(3317421..3317423));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16185;product=tRNA-Met CP118122.1 Genbank gene 3317801 3319144 . + . ID=gene-PUW34_16190;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=PUW34_16190 CP118122.1 Protein Homology CDS 3317801 3319144 . + 0 ID=cds-WJG96025.1;Parent=gene-PUW34_16190;Dbxref=NCBI_GP:WJG96025.1;Name=WJG96025.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=PUW34_16190;product=argininosuccinate synthase;protein_id=WJG96025.1;transl_table=11 CP118122.1 Genbank gene 3319302 3319754 . + . ID=gene-PUW34_16195;Name=PUW34_16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16195 CP118122.1 GeneMarkS-2+ CDS 3319302 3319754 . + 0 ID=cds-WJG96026.1;Parent=gene-PUW34_16195;Dbxref=NCBI_GP:WJG96026.1;Name=WJG96026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_16195;product=hypothetical protein;protein_id=WJG96026.1;transl_table=11 CP118122.1 Genbank gene 3319711 3320262 . + . ID=gene-PUW34_16200;Name=PUW34_16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16200 CP118122.1 GeneMarkS-2+ CDS 3319711 3320262 . + 0 ID=cds-WJG96027.1;Parent=gene-PUW34_16200;Dbxref=NCBI_GP:WJG96027.1;Name=WJG96027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_16200;product=hypothetical protein;protein_id=WJG96027.1;transl_table=11 CP118122.1 Genbank gene 3320347 3320433 . - . ID=gene-PUW34_16205;Name=PUW34_16205;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_16205 CP118122.1 tRNAscan-SE tRNA 3320347 3320433 . - . ID=rna-PUW34_16205;Parent=gene-PUW34_16205;anticodon=(pos:complement(3320397..3320399));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16205;product=tRNA-Leu CP118122.1 tRNAscan-SE exon 3320347 3320433 . - . ID=exon-PUW34_16205-1;Parent=rna-PUW34_16205;anticodon=(pos:complement(3320397..3320399));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16205;product=tRNA-Leu CP118122.1 Genbank gene 3320447 3320779 . - . ID=gene-PUW34_16210;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=PUW34_16210 CP118122.1 Protein Homology CDS 3320447 3320779 . - 0 ID=cds-WJG96028.1;Parent=gene-PUW34_16210;Dbxref=NCBI_GP:WJG96028.1;Name=WJG96028.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=PUW34_16210;product=preprotein translocase subunit SecG;protein_id=WJG96028.1;transl_table=11 CP118122.1 Genbank pseudogene 3321002 3322338 . - . ID=gene-PUW34_16215;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=PUW34_16215;pseudo=true CP118122.1 Protein Homology CDS 3321002 3322338 . - 0 ID=cds-PUW34_16215;Parent=gene-PUW34_16215;Note=frameshifted;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=PUW34_16215;product=phosphoglucosamine mutase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3322331 3323179 . - . ID=gene-PUW34_16220;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=PUW34_16220 CP118122.1 Protein Homology CDS 3322331 3323179 . - 0 ID=cds-WJG96029.1;Parent=gene-PUW34_16220;Dbxref=NCBI_GP:WJG96029.1;Name=WJG96029.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=PUW34_16220;product=dihydropteroate synthase;protein_id=WJG96029.1;transl_table=11 CP118122.1 Genbank gene 3323284 3325218 . - . ID=gene-PUW34_16225;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=PUW34_16225 CP118122.1 Protein Homology CDS 3323284 3325218 . - 0 ID=cds-WJG96030.1;Parent=gene-PUW34_16225;Dbxref=NCBI_GP:WJG96030.1;Name=WJG96030.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=PUW34_16225;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WJG96030.1;transl_table=11 CP118122.1 Genbank gene 3325322 3325948 . - . ID=gene-PUW34_16230;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=PUW34_16230 CP118122.1 Protein Homology CDS 3325322 3325948 . - 0 ID=cds-WJG96031.1;Parent=gene-PUW34_16230;Dbxref=NCBI_GP:WJG96031.1;Name=WJG96031.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=PUW34_16230;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WJG96031.1;transl_table=11 CP118122.1 Genbank gene 3326075 3326368 . + . ID=gene-PUW34_16235;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=PUW34_16235 CP118122.1 Protein Homology CDS 3326075 3326368 . + 0 ID=cds-WJG99020.1;Parent=gene-PUW34_16235;Dbxref=NCBI_GP:WJG99020.1;Name=WJG99020.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=PUW34_16235;product=ribosome assembly RNA-binding protein YhbY;protein_id=WJG99020.1;transl_table=11 CP118122.1 Genbank gene 3326524 3327000 . - . ID=gene-PUW34_16240;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=PUW34_16240 CP118122.1 Protein Homology CDS 3326524 3327000 . - 0 ID=cds-WJG96032.1;Parent=gene-PUW34_16240;Dbxref=NCBI_GP:WJG96032.1;Name=WJG96032.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=PUW34_16240;product=transcription elongation factor GreA;protein_id=WJG96032.1;transl_table=11 CP118122.1 Genbank gene 3327248 3328681 . + . ID=gene-PUW34_16245;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=PUW34_16245 CP118122.1 Protein Homology CDS 3327248 3328681 . + 0 ID=cds-WJG96033.1;Parent=gene-PUW34_16245;Dbxref=NCBI_GP:WJG96033.1;Name=WJG96033.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=PUW34_16245;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WJG96033.1;transl_table=11 CP118122.1 Genbank gene 3328790 3329983 . - . ID=gene-PUW34_16250;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=PUW34_16250 CP118122.1 Protein Homology CDS 3328790 3329983 . - 0 ID=cds-WJG96034.1;Parent=gene-PUW34_16250;Dbxref=NCBI_GP:WJG96034.1;Name=WJG96034.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=PUW34_16250;product=Obg family GTPase CgtA;protein_id=WJG96034.1;transl_table=11 CP118122.1 Genbank gene 3329999 3330964 . - . ID=gene-PUW34_16255;Name=PUW34_16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16255 CP118122.1 Protein Homology CDS 3329999 3330964 . - 0 ID=cds-WJG96035.1;Parent=gene-PUW34_16255;Dbxref=NCBI_GP:WJG96035.1;Name=WJG96035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=PUW34_16255;product=DMT family transporter;protein_id=WJG96035.1;transl_table=11 CP118122.1 Genbank gene 3331094 3331351 . - . ID=gene-PUW34_16260;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=PUW34_16260 CP118122.1 Protein Homology CDS 3331094 3331351 . - 0 ID=cds-WJG96036.1;Parent=gene-PUW34_16260;Dbxref=NCBI_GP:WJG96036.1;Name=WJG96036.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=PUW34_16260;product=50S ribosomal protein L27;protein_id=WJG96036.1;transl_table=11 CP118122.1 Genbank gene 3331371 3331682 . - . ID=gene-PUW34_16265;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=PUW34_16265 CP118122.1 Protein Homology CDS 3331371 3331682 . - 0 ID=cds-WJG96037.1;Parent=gene-PUW34_16265;Dbxref=NCBI_GP:WJG96037.1;Name=WJG96037.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=PUW34_16265;product=50S ribosomal protein L21;protein_id=WJG96037.1;transl_table=11 CP118122.1 Genbank gene 3331940 3332911 . + . ID=gene-PUW34_16270;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=PUW34_16270 CP118122.1 Protein Homology CDS 3331940 3332911 . + 0 ID=cds-WJG96038.1;Parent=gene-PUW34_16270;Dbxref=NCBI_GP:WJG96038.1;Name=WJG96038.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=PUW34_16270;product=octaprenyl diphosphate synthase;protein_id=WJG96038.1;transl_table=11 CP118122.1 Genbank gene 3333143 3333430 . + . ID=gene-PUW34_16275;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=PUW34_16275 CP118122.1 Protein Homology CDS 3333143 3333430 . + 0 ID=cds-WJG96039.1;Parent=gene-PUW34_16275;Dbxref=NCBI_GP:WJG96039.1;Name=WJG96039.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=PUW34_16275;product=DNA-binding transcriptional regulator SfsB;protein_id=WJG96039.1;transl_table=11 CP118122.1 Genbank pseudogene 3333489 3334747 . - . ID=gene-PUW34_16280;Name=murA;gbkey=Gene;gene=murA;gene_biotype=pseudogene;locus_tag=PUW34_16280;pseudo=true CP118122.1 Protein Homology CDS 3333489 3334747 . - 0 ID=cds-PUW34_16280;Parent=gene-PUW34_16280;Note=frameshifted;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=PUW34_16280;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3334801 3335055 . - . ID=gene-PUW34_16285;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=PUW34_16285 CP118122.1 Protein Homology CDS 3334801 3335055 . - 0 ID=cds-WJG96040.1;Parent=gene-PUW34_16285;Dbxref=NCBI_GP:WJG96040.1;Name=WJG96040.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=PUW34_16285;product=BolA family iron metabolism protein IbaG;protein_id=WJG96040.1;transl_table=11 CP118122.1 Genbank gene 3335243 3335539 . - . ID=gene-PUW34_16290;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=PUW34_16290 CP118122.1 Protein Homology CDS 3335243 3335539 . - 0 ID=cds-WJG96041.1;Parent=gene-PUW34_16290;Dbxref=NCBI_GP:WJG96041.1;Name=WJG96041.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=PUW34_16290;product=lipid asymmetry maintenance protein MlaB;protein_id=WJG96041.1;transl_table=11 CP118122.1 Genbank gene 3335539 3336174 . - . ID=gene-PUW34_16295;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=PUW34_16295 CP118122.1 Protein Homology CDS 3335539 3336174 . - 0 ID=cds-WJG96042.1;Parent=gene-PUW34_16295;Dbxref=NCBI_GP:WJG96042.1;Name=WJG96042.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=PUW34_16295;product=phospholipid-binding protein MlaC;protein_id=WJG96042.1;transl_table=11 CP118122.1 Genbank gene 3336167 3336742 . - . ID=gene-PUW34_16300;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=PUW34_16300 CP118122.1 Protein Homology CDS 3336167 3336742 . - 0 ID=cds-WJG96043.1;Parent=gene-PUW34_16300;Dbxref=NCBI_GP:WJG96043.1;Name=WJG96043.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=PUW34_16300;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WJG96043.1;transl_table=11 CP118122.1 Genbank gene 3336747 3337529 . - . ID=gene-PUW34_16305;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=PUW34_16305 CP118122.1 Protein Homology CDS 3336747 3337529 . - 0 ID=cds-WJG96044.1;Parent=gene-PUW34_16305;Dbxref=NCBI_GP:WJG96044.1;Name=WJG96044.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=PUW34_16305;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WJG96044.1;transl_table=11 CP118122.1 Genbank gene 3337537 3338349 . - . ID=gene-PUW34_16310;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=PUW34_16310 CP118122.1 Protein Homology CDS 3337537 3338349 . - 0 ID=cds-WJG96045.1;Parent=gene-PUW34_16310;Dbxref=NCBI_GP:WJG96045.1;Name=WJG96045.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=PUW34_16310;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WJG96045.1;transl_table=11 CP118122.1 Genbank gene 3338562 3339539 . + . ID=gene-PUW34_16315;Name=PUW34_16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16315 CP118122.1 Protein Homology CDS 3338562 3339539 . + 0 ID=cds-WJG96046.1;Parent=gene-PUW34_16315;Dbxref=NCBI_GP:WJG96046.1;Name=WJG96046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=PUW34_16315;product=calcium/sodium antiporter;protein_id=WJG96046.1;transl_table=11 CP118122.1 Genbank gene 3339553 3340539 . + . ID=gene-PUW34_16320;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=PUW34_16320 CP118122.1 Protein Homology CDS 3339553 3340539 . + 0 ID=cds-WJG96047.1;Parent=gene-PUW34_16320;Dbxref=NCBI_GP:WJG96047.1;Name=WJG96047.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=PUW34_16320;product=arabinose-5-phosphate isomerase KdsD;protein_id=WJG96047.1;transl_table=11 CP118122.1 Genbank gene 3340560 3341126 . + . ID=gene-PUW34_16325;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=PUW34_16325 CP118122.1 Protein Homology CDS 3340560 3341126 . + 0 ID=cds-WJG96048.1;Parent=gene-PUW34_16325;Dbxref=NCBI_GP:WJG96048.1;Name=WJG96048.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=PUW34_16325;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WJG96048.1;transl_table=11 CP118122.1 Genbank gene 3341123 3341698 . + . ID=gene-PUW34_16330;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=PUW34_16330 CP118122.1 Protein Homology CDS 3341123 3341698 . + 0 ID=cds-WJG96049.1;Parent=gene-PUW34_16330;Dbxref=NCBI_GP:WJG96049.1;Name=WJG96049.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=PUW34_16330;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WJG96049.1;transl_table=11 CP118122.1 Genbank gene 3341667 3342221 . + . ID=gene-PUW34_16335;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=PUW34_16335 CP118122.1 Protein Homology CDS 3341667 3342221 . + 0 ID=cds-WJG96050.1;Parent=gene-PUW34_16335;Dbxref=NCBI_GP:WJG96050.1;Name=WJG96050.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=PUW34_16335;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WJG96050.1;transl_table=11 CP118122.1 Genbank gene 3342228 3342953 . + . ID=gene-PUW34_16340;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=PUW34_16340 CP118122.1 Protein Homology CDS 3342228 3342953 . + 0 ID=cds-WJG96051.1;Parent=gene-PUW34_16340;Dbxref=NCBI_GP:WJG96051.1;Name=WJG96051.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=PUW34_16340;product=LPS export ABC transporter ATP-binding protein;protein_id=WJG96051.1;transl_table=11 CP118122.1 Genbank gene 3343001 3344434 . + . ID=gene-PUW34_16345;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=PUW34_16345 CP118122.1 Protein Homology CDS 3343001 3344434 . + 0 ID=cds-WJG96052.1;Parent=gene-PUW34_16345;Dbxref=NCBI_GP:WJG96052.1;Name=WJG96052.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=PUW34_16345;product=RNA polymerase factor sigma-54;protein_id=WJG96052.1;transl_table=11 CP118122.1 Genbank gene 3344457 3344744 . + . ID=gene-PUW34_16350;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=PUW34_16350 CP118122.1 Protein Homology CDS 3344457 3344744 . + 0 ID=cds-WJG96053.1;Parent=gene-PUW34_16350;Dbxref=NCBI_GP:WJG96053.1;Name=WJG96053.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=PUW34_16350;product=ribosome hibernation promoting factor;protein_id=WJG96053.1;transl_table=11 CP118122.1 Genbank gene 3344862 3345353 . + . ID=gene-PUW34_16355;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=PUW34_16355 CP118122.1 Protein Homology CDS 3344862 3345353 . + 0 ID=cds-WJG96054.1;Parent=gene-PUW34_16355;Dbxref=NCBI_GP:WJG96054.1;Name=WJG96054.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=PUW34_16355;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WJG96054.1;transl_table=11 CP118122.1 Genbank gene 3345399 3346253 . + . ID=gene-PUW34_16360;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=PUW34_16360 CP118122.1 Protein Homology CDS 3345399 3346253 . + 0 ID=cds-WJG96055.1;Parent=gene-PUW34_16360;Dbxref=NCBI_GP:WJG96055.1;Name=WJG96055.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=PUW34_16360;product=RNase adapter RapZ;protein_id=WJG96055.1;transl_table=11 CP118122.1 Genbank gene 3346250 3346522 . + . ID=gene-PUW34_16365;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=PUW34_16365 CP118122.1 Protein Homology CDS 3346250 3346522 . + 0 ID=cds-WJG96056.1;Parent=gene-PUW34_16365;Dbxref=NCBI_GP:WJG96056.1;Name=WJG96056.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=PUW34_16365;product=PTS phosphocarrier protein NPr;protein_id=WJG96056.1;transl_table=11 CP118122.1 Genbank gene 3346772 3347404 . + . ID=gene-PUW34_16370;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=PUW34_16370 CP118122.1 Protein Homology CDS 3346772 3347404 . + 0 ID=cds-WJG96057.1;Parent=gene-PUW34_16370;Dbxref=NCBI_GP:WJG96057.1;Name=WJG96057.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=PUW34_16370;product=PhoP regulatory network protein YrbL;protein_id=WJG96057.1;transl_table=11 CP118122.1 Genbank gene 3347479 3348207 . - . ID=gene-PUW34_16375;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=PUW34_16375 CP118122.1 Protein Homology CDS 3347479 3348207 . - 0 ID=cds-WJG96058.1;Parent=gene-PUW34_16375;Dbxref=NCBI_GP:WJG96058.1;Name=WJG96058.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=PUW34_16375;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WJG96058.1;transl_table=11 CP118122.1 Genbank gene 3348204 3348857 . - . ID=gene-PUW34_16380;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=PUW34_16380 CP118122.1 Protein Homology CDS 3348204 3348857 . - 0 ID=cds-WJG96059.1;Parent=gene-PUW34_16380;Dbxref=NCBI_GP:WJG96059.1;Name=WJG96059.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=PUW34_16380;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WJG96059.1;transl_table=11 CP118122.1 Genbank pseudogene 3349084 3351419 . - . ID=gene-PUW34_16385;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=pseudogene;locus_tag=PUW34_16385;pseudo=true CP118122.1 Protein Homology CDS 3349084 3351419 . - 0 ID=cds-PUW34_16385;Parent=gene-PUW34_16385;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=PUW34_16385;product=aerobic respiration two-component sensor histidine kinase ArcB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3351513 3352442 . - . ID=gene-PUW34_16390;Name=PUW34_16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16390 CP118122.1 Protein Homology CDS 3351513 3352442 . - 0 ID=cds-WJG96060.1;Parent=gene-PUW34_16390;Dbxref=NCBI_GP:WJG96060.1;Name=WJG96060.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=PUW34_16390;product=TIGR01212 family radical SAM protein;protein_id=WJG96060.1;transl_table=11 CP118122.1 Genbank gene 3353113 3357573 . + . ID=gene-PUW34_16395;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=PUW34_16395 CP118122.1 Protein Homology CDS 3353113 3357573 . + 0 ID=cds-WJG96061.1;Parent=gene-PUW34_16395;Dbxref=NCBI_GP:WJG96061.1;Name=WJG96061.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=PUW34_16395;product=glutamate synthase large subunit;protein_id=WJG96061.1;transl_table=11 CP118122.1 Genbank gene 3357583 3359001 . + . ID=gene-PUW34_16400;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=PUW34_16400 CP118122.1 Protein Homology CDS 3357583 3359001 . + 0 ID=cds-WJG96062.1;Parent=gene-PUW34_16400;Dbxref=NCBI_GP:WJG96062.1;Name=WJG96062.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=PUW34_16400;product=glutamate synthase subunit GltD;protein_id=WJG96062.1;transl_table=11 CP118122.1 Genbank gene 3359208 3360311 . + . ID=gene-PUW34_16405;Name=PUW34_16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16405 CP118122.1 Protein Homology CDS 3359208 3360311 . + 0 ID=cds-WJG96063.1;Parent=gene-PUW34_16405;Dbxref=NCBI_GP:WJG96063.1;Name=WJG96063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=PUW34_16405;product=PDDEXK nuclease domain-containing protein;protein_id=WJG96063.1;transl_table=11 CP118122.1 Genbank gene 3360427 3361680 . + . ID=gene-PUW34_16410;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=PUW34_16410 CP118122.1 Protein Homology CDS 3360427 3361680 . + 0 ID=cds-WJG96064.1;Parent=gene-PUW34_16410;Dbxref=NCBI_GP:WJG96064.1;Name=WJG96064.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=PUW34_16410;product=cytosine permease;protein_id=WJG96064.1;transl_table=11 CP118122.1 Genbank gene 3361667 3362947 . + . ID=gene-PUW34_16415;Name=PUW34_16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16415 CP118122.1 Protein Homology CDS 3361667 3362947 . + 0 ID=cds-WJG96065.1;Parent=gene-PUW34_16415;Dbxref=NCBI_GP:WJG96065.1;Name=WJG96065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=PUW34_16415;product=cytosine deaminase;protein_id=WJG96065.1;transl_table=11 CP118122.1 Genbank gene 3363029 3363496 . - . ID=gene-PUW34_16420;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=PUW34_16420 CP118122.1 Protein Homology CDS 3363029 3363496 . - 0 ID=cds-WJG96066.1;Parent=gene-PUW34_16420;Dbxref=NCBI_GP:WJG96066.1;Name=WJG96066.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=cellular response to DNA damage stimulus|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=PUW34_16420;product=N-acetylneuraminate anomerase;protein_id=WJG96066.1;transl_table=11 CP118122.1 Genbank gene 3363493 3364368 . - . ID=gene-PUW34_16425;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=PUW34_16425 CP118122.1 Protein Homology CDS 3363493 3364368 . - 0 ID=cds-WJG96067.1;Parent=gene-PUW34_16425;Dbxref=NCBI_GP:WJG96067.1;Name=WJG96067.1;gbkey=CDS;gene=nanK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=PUW34_16425;product=N-acetylmannosamine kinase;protein_id=WJG96067.1;transl_table=11 CP118122.1 Genbank gene 3364365 3365054 . - . ID=gene-PUW34_16430;Name=PUW34_16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16430 CP118122.1 Protein Homology CDS 3364365 3365054 . - 0 ID=cds-WJG96068.1;Parent=gene-PUW34_16430;Dbxref=NCBI_GP:WJG96068.1;Name=WJG96068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=PUW34_16430;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WJG96068.1;transl_table=11 CP118122.1 Genbank pseudogene 3365101 3366590 . - . ID=gene-PUW34_16435;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=pseudogene;locus_tag=PUW34_16435;pseudo=true CP118122.1 Protein Homology CDS 3365101 3366590 . - 0 ID=cds-PUW34_16435;Parent=gene-PUW34_16435;Note=frameshifted;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=PUW34_16435;product=sialic acid transporter NanT;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3366706 3367599 . - . ID=gene-PUW34_16440;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=PUW34_16440 CP118122.1 Protein Homology CDS 3366706 3367599 . - 0 ID=cds-WJG96069.1;Parent=gene-PUW34_16440;Dbxref=NCBI_GP:WJG96069.1;Name=WJG96069.1;Ontology_term=GO:0006040,GO:0009273,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=PUW34_16440;product=N-acetylneuraminate lyase;protein_id=WJG96069.1;transl_table=11 CP118122.1 Genbank gene 3367734 3368525 . - . ID=gene-PUW34_16445;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=PUW34_16445 CP118122.1 Protein Homology CDS 3367734 3368525 . - 0 ID=cds-WJG96070.1;Parent=gene-PUW34_16445;Dbxref=NCBI_GP:WJG96070.1;Name=WJG96070.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=PUW34_16445;product=transcriptional regulator NanR;protein_id=WJG96070.1;transl_table=11 CP118122.1 Genbank gene 3368634 3369134 . - . ID=gene-PUW34_16450;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=PUW34_16450 CP118122.1 Protein Homology CDS 3368634 3369134 . - 0 ID=cds-WJG96071.1;Parent=gene-PUW34_16450;Dbxref=NCBI_GP:WJG96071.1;Name=WJG96071.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=PUW34_16450;product=ClpXP protease specificity-enhancing factor;protein_id=WJG96071.1;transl_table=11 CP118122.1 Genbank gene 3369140 3369778 . - . ID=gene-PUW34_16455;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=PUW34_16455 CP118122.1 Protein Homology CDS 3369140 3369778 . - 0 ID=cds-WJG96072.1;Parent=gene-PUW34_16455;Dbxref=NCBI_GP:WJG96072.1;Name=WJG96072.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=PUW34_16455;product=stringent starvation protein SspA;protein_id=WJG96072.1;transl_table=11 CP118122.1 Genbank gene 3370040 3370792 . - . ID=gene-PUW34_16460;Name=PUW34_16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16460 CP118122.1 Protein Homology CDS 3370040 3370792 . - 0 ID=cds-WJG99021.1;Parent=gene-PUW34_16460;Dbxref=NCBI_GP:WJG99021.1;Name=WJG99021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=PUW34_16460;product=DUF695 domain-containing protein;protein_id=WJG99021.1;transl_table=11 CP118122.1 Genbank gene 3370992 3371384 . - . ID=gene-PUW34_16465;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=PUW34_16465 CP118122.1 Protein Homology CDS 3370992 3371384 . - 0 ID=cds-WJG96073.1;Parent=gene-PUW34_16465;Dbxref=NCBI_GP:WJG96073.1;Name=WJG96073.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=PUW34_16465;product=30S ribosomal protein S9;protein_id=WJG96073.1;transl_table=11 CP118122.1 Genbank gene 3371400 3371828 . - . ID=gene-PUW34_16470;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=PUW34_16470 CP118122.1 Protein Homology CDS 3371400 3371828 . - 0 ID=cds-WJG96074.1;Parent=gene-PUW34_16470;Dbxref=NCBI_GP:WJG96074.1;Name=WJG96074.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=PUW34_16470;product=50S ribosomal protein L13;protein_id=WJG96074.1;transl_table=11 CP118122.1 Genbank gene 3372130 3373254 . - . ID=gene-PUW34_16475;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=PUW34_16475 CP118122.1 Protein Homology CDS 3372130 3373254 . - 0 ID=cds-WJG96075.1;Parent=gene-PUW34_16475;Dbxref=NCBI_GP:WJG96075.1;Name=WJG96075.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=PUW34_16475;product=cell division protein ZapE;protein_id=WJG96075.1;transl_table=11 CP118122.1 Genbank gene 3373447 3373845 . + . ID=gene-PUW34_16480;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=PUW34_16480 CP118122.1 Protein Homology CDS 3373447 3373845 . + 0 ID=cds-WJG96076.1;Parent=gene-PUW34_16480;Dbxref=NCBI_GP:WJG96076.1;Name=WJG96076.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=PUW34_16480;product=Z-ring associated protein ZapG;protein_id=WJG96076.1;transl_table=11 CP118122.1 Genbank gene 3374002 3375369 . + . ID=gene-PUW34_16485;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=PUW34_16485 CP118122.1 Protein Homology CDS 3374002 3375369 . + 0 ID=cds-WJG96077.1;Parent=gene-PUW34_16485;Dbxref=NCBI_GP:WJG96077.1;Name=WJG96077.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=PUW34_16485;product=serine endoprotease DegQ;protein_id=WJG96077.1;transl_table=11 CP118122.1 Genbank gene 3375462 3376532 . + . ID=gene-PUW34_16490;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=PUW34_16490 CP118122.1 Protein Homology CDS 3375462 3376532 . + 0 ID=cds-WJG96078.1;Parent=gene-PUW34_16490;Dbxref=NCBI_GP:WJG96078.1;Name=WJG96078.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=PUW34_16490;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WJG96078.1;transl_table=11 CP118122.1 Genbank gene 3376566 3377297 . - . ID=gene-PUW34_16495;Name=PUW34_16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16495 CP118122.1 Protein Homology CDS 3376566 3377297 . - 0 ID=cds-WJG96079.1;Parent=gene-PUW34_16495;Dbxref=NCBI_GP:WJG96079.1;Name=WJG96079.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=PUW34_16495;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WJG96079.1;transl_table=11 CP118122.1 Genbank gene 3377317 3378618 . - . ID=gene-PUW34_16500;Name=PUW34_16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16500 CP118122.1 Protein Homology CDS 3377317 3378618 . - 0 ID=cds-WJG96080.1;Parent=gene-PUW34_16500;Dbxref=NCBI_GP:WJG96080.1;Name=WJG96080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW34_16500;product=oxalacetate decarboxylase subunit beta;protein_id=WJG96080.1;transl_table=11 CP118122.1 Genbank gene 3378631 3380403 . - . ID=gene-PUW34_16505;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW34_16505 CP118122.1 Protein Homology CDS 3378631 3380403 . - 0 ID=cds-WJG96081.1;Parent=gene-PUW34_16505;Dbxref=NCBI_GP:WJG96081.1;Name=WJG96081.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW34_16505;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJG96081.1;transl_table=11 CP118122.1 Genbank gene 3380419 3380661 . - . ID=gene-PUW34_16510;Name=PUW34_16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16510 CP118122.1 Protein Homology CDS 3380419 3380661 . - 0 ID=cds-WJG96082.1;Parent=gene-PUW34_16510;Dbxref=NCBI_GP:WJG96082.1;Name=WJG96082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=PUW34_16510;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJG96082.1;transl_table=11 CP118122.1 Genbank gene 3380818 3381435 . - . ID=gene-PUW34_16515;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=PUW34_16515 CP118122.1 Protein Homology CDS 3380818 3381435 . - 0 ID=cds-WJG96083.1;Parent=gene-PUW34_16515;Dbxref=NCBI_GP:WJG96083.1;Name=WJG96083.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=PUW34_16515;product=L(+)-tartrate dehydratase subunit beta;protein_id=WJG96083.1;transl_table=11 CP118122.1 Genbank gene 3381435 3382334 . - . ID=gene-PUW34_16520;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=PUW34_16520 CP118122.1 Protein Homology CDS 3381435 3382334 . - 0 ID=cds-WJG96084.1;Parent=gene-PUW34_16520;Dbxref=NCBI_GP:WJG96084.1;Name=WJG96084.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=PUW34_16520;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WJG96084.1;transl_table=11 CP118122.1 Genbank pseudogene 3382367 3383634 . - . ID=gene-PUW34_16525;Name=PUW34_16525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_16525;pseudo=true CP118122.1 Protein Homology CDS 3382367 3383634 . - 0 ID=cds-PUW34_16525;Parent=gene-PUW34_16525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=PUW34_16525;product=SLC13 family permease;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3383845 3384510 . - . ID=gene-PUW34_16530;Name=PUW34_16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16530 CP118122.1 Protein Homology CDS 3383845 3384510 . - 0 ID=cds-WJG96085.1;Parent=gene-PUW34_16530;Dbxref=NCBI_GP:WJG96085.1;Name=WJG96085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=PUW34_16530;product=GntR family transcriptional regulator;protein_id=WJG96085.1;transl_table=11 CP118122.1 Genbank gene 3384497 3385126 . - . ID=gene-PUW34_16535;Name=PUW34_16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16535 CP118122.1 Protein Homology CDS 3384497 3385126 . - 0 ID=cds-WJG96086.1;Parent=gene-PUW34_16535;Dbxref=NCBI_GP:WJG96086.1;Name=WJG96086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=PUW34_16535;product=GntR family transcriptional regulator;protein_id=WJG96086.1;transl_table=11 CP118122.1 Genbank gene 3385246 3386184 . - . ID=gene-PUW34_16540;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=PUW34_16540 CP118122.1 Protein Homology CDS 3385246 3386184 . - 0 ID=cds-WJG96087.1;Parent=gene-PUW34_16540;Dbxref=NCBI_GP:WJG96087.1;Name=WJG96087.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=PUW34_16540;product=malate dehydrogenase;protein_id=WJG96087.1;transl_table=11 CP118122.1 Genbank gene 3386599 3387069 . + . ID=gene-PUW34_16545;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=PUW34_16545 CP118122.1 Protein Homology CDS 3386599 3387069 . + 0 ID=cds-WJG96088.1;Parent=gene-PUW34_16545;Dbxref=NCBI_GP:WJG96088.1;Name=WJG96088.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=PUW34_16545;product=transcriptional regulator ArgR;protein_id=WJG96088.1;transl_table=11 CP118122.1 Genbank gene 3387433 3387696 . + . ID=gene-PUW34_16550;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=PUW34_16550 CP118122.1 Protein Homology CDS 3387433 3387696 . + 0 ID=cds-WJG96089.1;Parent=gene-PUW34_16550;Dbxref=NCBI_GP:WJG96089.1;Name=WJG96089.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=PUW34_16550;product=peroxide/acid stress response protein YhcN;protein_id=WJG96089.1;transl_table=11 CP118122.1 Genbank gene 3387800 3388066 . + . ID=gene-PUW34_16555;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=PUW34_16555 CP118122.1 Protein Homology CDS 3387800 3388066 . + 0 ID=cds-WJG96090.1;Parent=gene-PUW34_16555;Dbxref=NCBI_GP:WJG96090.1;Name=WJG96090.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=PUW34_16555;product=DUF1471 family stress response protein YhcN-B;protein_id=WJG96090.1;transl_table=11 CP118122.1 Genbank gene 3388126 3388398 . - . ID=gene-PUW34_16560;Name=PUW34_16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16560 CP118122.1 Protein Homology CDS 3388126 3388398 . - 0 ID=cds-WJG96091.1;Parent=gene-PUW34_16560;Dbxref=NCBI_GP:WJG96091.1;Name=WJG96091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=PUW34_16560;product=hypothetical protein;protein_id=WJG96091.1;transl_table=11 CP118122.1 Genbank gene 3388570 3390537 . - . ID=gene-PUW34_16565;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=PUW34_16565 CP118122.1 Protein Homology CDS 3388570 3390537 . - 0 ID=cds-WJG96092.1;Parent=gene-PUW34_16565;Dbxref=NCBI_GP:WJG96092.1;Name=WJG96092.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=PUW34_16565;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WJG96092.1;transl_table=11 CP118122.1 Genbank gene 3390543 3391475 . - . ID=gene-PUW34_16570;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=PUW34_16570 CP118122.1 Protein Homology CDS 3390543 3391475 . - 0 ID=cds-WJG96093.1;Parent=gene-PUW34_16570;Dbxref=NCBI_GP:WJG96093.1;Name=WJG96093.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=PUW34_16570;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WJG96093.1;transl_table=11 CP118122.1 Genbank gene 3391483 3391686 . - . ID=gene-PUW34_16575;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=PUW34_16575 CP118122.1 Protein Homology CDS 3391483 3391686 . - 0 ID=cds-WJG96094.1;Parent=gene-PUW34_16575;Dbxref=NCBI_GP:WJG96094.1;Name=WJG96094.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=PUW34_16575;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WJG96094.1;transl_table=11 CP118122.1 Genbank gene 3391868 3392797 . + . ID=gene-PUW34_16580;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=PUW34_16580 CP118122.1 Protein Homology CDS 3391868 3392797 . + 0 ID=cds-WJG96095.1;Parent=gene-PUW34_16580;Dbxref=NCBI_GP:WJG96095.1;Name=WJG96095.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=PUW34_16580;product=HTH-type transcriptional activator AaeR;protein_id=WJG96095.1;transl_table=11 CP118122.1 Genbank gene 3392920 3394365 . - . ID=gene-PUW34_16585;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=PUW34_16585 CP118122.1 Protein Homology CDS 3392920 3394365 . - 0 ID=cds-WJG96096.1;Parent=gene-PUW34_16585;Dbxref=NCBI_GP:WJG96096.1;Name=WJG96096.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=PUW34_16585;product=metalloprotease TldD;protein_id=WJG96096.1;transl_table=11 CP118122.1 Genbank pseudogene 3394510 3398307 . - . ID=gene-PUW34_16590;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=pseudogene;locus_tag=PUW34_16590;pseudo=true CP118122.1 Protein Homology CDS 3394510 3398307 . - 0 ID=cds-PUW34_16590;Parent=gene-PUW34_16590;Note=frameshifted;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=PUW34_16590;product=AsmA2 domain-containing protein YhdP;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3398418 3399887 . - . ID=gene-PUW34_16595;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=PUW34_16595 CP118122.1 Protein Homology CDS 3398418 3399887 . - 0 ID=cds-WJG96097.1;Parent=gene-PUW34_16595;Dbxref=NCBI_GP:WJG96097.1;Name=WJG96097.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=PUW34_16595;product=ribonuclease G;protein_id=WJG96097.1;transl_table=11 CP118122.1 Genbank gene 3399877 3400470 . - . ID=gene-PUW34_16600;Name=PUW34_16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16600 CP118122.1 Protein Homology CDS 3399877 3400470 . - 0 ID=cds-WJG96098.1;Parent=gene-PUW34_16600;Dbxref=NCBI_GP:WJG96098.1;Name=WJG96098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=PUW34_16600;product=Maf family protein;protein_id=WJG96098.1;transl_table=11 CP118122.1 Genbank gene 3400479 3400967 . - . ID=gene-PUW34_16605;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=PUW34_16605 CP118122.1 Protein Homology CDS 3400479 3400967 . - 0 ID=cds-WJG99022.1;Parent=gene-PUW34_16605;Dbxref=NCBI_GP:WJG99022.1;Name=WJG99022.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=PUW34_16605;product=rod shape-determining protein MreD;protein_id=WJG99022.1;transl_table=11 CP118122.1 Genbank gene 3400970 3402022 . - . ID=gene-PUW34_16610;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=PUW34_16610 CP118122.1 Protein Homology CDS 3400970 3402022 . - 0 ID=cds-WJG96099.1;Parent=gene-PUW34_16610;Dbxref=NCBI_GP:WJG96099.1;Name=WJG96099.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=PUW34_16610;product=rod shape-determining protein MreC;protein_id=WJG96099.1;transl_table=11 CP118122.1 Genbank gene 3402087 3403130 . - . ID=gene-PUW34_16615;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=PUW34_16615 CP118122.1 Protein Homology CDS 3402087 3403130 . - 0 ID=cds-WJG96100.1;Parent=gene-PUW34_16615;Dbxref=NCBI_GP:WJG96100.1;Name=WJG96100.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=PUW34_16615;product=rod shape-determining protein MreB;protein_id=WJG96100.1;transl_table=11 CP118122.1 Genbank gene 3403438 3405378 . - . ID=gene-PUW34_16620;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=PUW34_16620 CP118122.1 Protein Homology CDS 3403438 3405378 . - 0 ID=cds-WJG96101.1;Parent=gene-PUW34_16620;Dbxref=NCBI_GP:WJG96101.1;Name=WJG96101.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=PUW34_16620;product=RNase E specificity factor CsrD;protein_id=WJG96101.1;transl_table=11 CP118122.1 Genbank pseudogene 3405582 3406555 . + . ID=gene-PUW34_16625;Name=PUW34_16625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_16625;pseudo=true CP118122.1 Protein Homology CDS 3405582 3406555 . + 0 ID=cds-PUW34_16625;Parent=gene-PUW34_16625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=PUW34_16625;product=oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3406668 3407672 . + . ID=gene-PUW34_16630;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=PUW34_16630 CP118122.1 Protein Homology CDS 3406668 3407672 . + 0 ID=cds-WJG96102.1;Parent=gene-PUW34_16630;Dbxref=NCBI_GP:WJG96102.1;Name=WJG96102.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=PUW34_16630;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WJG96102.1;transl_table=11 CP118122.1 Genbank gene 3407673 3408272 . + . ID=gene-PUW34_16635;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=PUW34_16635 CP118122.1 Protein Homology CDS 3407673 3408272 . + 0 ID=cds-WJG96103.1;Parent=gene-PUW34_16635;Dbxref=NCBI_GP:WJG96103.1;Name=WJG96103.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=PUW34_16635;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WJG96103.1;transl_table=11 CP118122.1 Genbank gene 3408665 3409135 . + . ID=gene-PUW34_16640;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=PUW34_16640 CP118122.1 Protein Homology CDS 3408665 3409135 . + 0 ID=cds-WJG96104.1;Parent=gene-PUW34_16640;Dbxref=NCBI_GP:WJG96104.1;Name=WJG96104.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=PUW34_16640;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WJG96104.1;transl_table=11 CP118122.1 Genbank gene 3409146 3410495 . + . ID=gene-PUW34_16645;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PUW34_16645 CP118122.1 Protein Homology CDS 3409146 3410495 . + 0 ID=cds-WJG96105.1;Parent=gene-PUW34_16645;Dbxref=NCBI_GP:WJG96105.1;Name=WJG96105.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=PUW34_16645;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WJG96105.1;transl_table=11 CP118122.1 Genbank gene 3410604 3410846 . + . ID=gene-PUW34_16650;Name=PUW34_16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16650 CP118122.1 Protein Homology CDS 3410604 3410846 . + 0 ID=cds-WJG96106.1;Parent=gene-PUW34_16650;Dbxref=NCBI_GP:WJG96106.1;Name=WJG96106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=PUW34_16650;product=YhdT family protein;protein_id=WJG96106.1;transl_table=11 CP118122.1 Genbank gene 3410836 3412287 . + . ID=gene-PUW34_16655;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=PUW34_16655 CP118122.1 Protein Homology CDS 3410836 3412287 . + 0 ID=cds-WJG96107.1;Parent=gene-PUW34_16655;Dbxref=NCBI_GP:WJG96107.1;Name=WJG96107.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=PUW34_16655;product=sodium/pantothenate symporter;protein_id=WJG96107.1;transl_table=11 CP118122.1 Genbank gene 3412299 3413180 . + . ID=gene-PUW34_16660;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=PUW34_16660 CP118122.1 Protein Homology CDS 3412299 3413180 . + 0 ID=cds-WJG96108.1;Parent=gene-PUW34_16660;Dbxref=NCBI_GP:WJG96108.1;Name=WJG96108.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=PUW34_16660;product=50S ribosomal protein L11 methyltransferase;protein_id=WJG96108.1;transl_table=11 CP118122.1 Genbank gene 3413841 3414806 . + . ID=gene-PUW34_16665;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=PUW34_16665 CP118122.1 Protein Homology CDS 3413841 3414806 . + 0 ID=cds-WJG96109.1;Parent=gene-PUW34_16665;Dbxref=NCBI_GP:WJG96109.1;Name=WJG96109.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=PUW34_16665;product=tRNA dihydrouridine synthase DusB;protein_id=WJG96109.1;transl_table=11 CP118122.1 Genbank gene 3414832 3415128 . + . ID=gene-PUW34_16670;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=PUW34_16670 CP118122.1 Protein Homology CDS 3414832 3415128 . + 0 ID=cds-WJG96110.1;Parent=gene-PUW34_16670;Dbxref=NCBI_GP:WJG96110.1;Name=WJG96110.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=PUW34_16670;product=DNA-binding transcriptional regulator Fis;protein_id=WJG96110.1;transl_table=11 CP118122.1 Genbank gene 3415214 3416098 . + . ID=gene-PUW34_16675;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=PUW34_16675 CP118122.1 Protein Homology CDS 3415214 3416098 . + 0 ID=cds-WJG96111.1;Parent=gene-PUW34_16675;Dbxref=NCBI_GP:WJG96111.1;Name=WJG96111.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=PUW34_16675;product=adenine-specific DNA-methyltransferase;protein_id=WJG96111.1;transl_table=11 CP118122.1 Genbank gene 3416181 3416345 . + . ID=gene-PUW34_16680;Name=PUW34_16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16680 CP118122.1 Protein Homology CDS 3416181 3416345 . + 0 ID=cds-WJG96112.1;Parent=gene-PUW34_16680;Dbxref=NCBI_GP:WJG96112.1;Name=WJG96112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=PUW34_16680;product=DUF2556 family protein;protein_id=WJG96112.1;transl_table=11 CP118122.1 Genbank gene 3416496 3418595 . + . ID=gene-PUW34_16685;Name=PUW34_16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16685 CP118122.1 Protein Homology CDS 3416496 3418595 . + 0 ID=cds-WJG96113.1;Parent=gene-PUW34_16685;Dbxref=NCBI_GP:WJG96113.1;Name=WJG96113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=PUW34_16685;product=EAL domain-containing protein;protein_id=WJG96113.1;transl_table=11 CP118122.1 Genbank gene 3418598 3419260 . - . ID=gene-PUW34_16690;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=PUW34_16690 CP118122.1 Protein Homology CDS 3418598 3419260 . - 0 ID=cds-WJG96114.1;Parent=gene-PUW34_16690;Dbxref=NCBI_GP:WJG96114.1;Name=WJG96114.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=PUW34_16690;product=acrEF/envCD operon transcriptional regulator;protein_id=WJG96114.1;transl_table=11 CP118122.1 Genbank pseudogene 3419673 3420829 . + . ID=gene-PUW34_16695;Name=PUW34_16695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_16695;pseudo=true CP118122.1 Protein Homology CDS 3419673 3420829 . + 0 ID=cds-PUW34_16695;Parent=gene-PUW34_16695;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=PUW34_16695;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3420841 3423953 . + . ID=gene-PUW34_16700;Name=PUW34_16700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_16700;pseudo=true CP118122.1 Protein Homology CDS 3420841 3423953 . + 0 ID=cds-PUW34_16700;Parent=gene-PUW34_16700;Note=frameshifted;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=PUW34_16700;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3424191 3424412 . + . ID=gene-PUW34_16705;Name=PUW34_16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16705 CP118122.1 Protein Homology CDS 3424191 3424412 . + 0 ID=cds-WJG96115.1;Parent=gene-PUW34_16705;Dbxref=NCBI_GP:WJG96115.1;Name=WJG96115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=PUW34_16705;product=hypothetical protein;protein_id=WJG96115.1;transl_table=11 CP118122.1 Genbank gene 3425196 3425311 . - . ID=gene-PUW34_16710;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW34_16710 CP118122.1 cmsearch rRNA 3425196 3425311 . - . ID=rna-PUW34_16710;Parent=gene-PUW34_16710;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_16710;product=5S ribosomal RNA CP118122.1 cmsearch exon 3425196 3425311 . - . ID=exon-PUW34_16710-1;Parent=rna-PUW34_16710;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_16710;product=5S ribosomal RNA CP118122.1 Genbank gene 3425351 3425426 . - . ID=gene-PUW34_16715;Name=PUW34_16715;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_16715 CP118122.1 tRNAscan-SE tRNA 3425351 3425426 . - . ID=rna-PUW34_16715;Parent=gene-PUW34_16715;anticodon=(pos:complement(3425391..3425393));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16715;product=tRNA-Thr CP118122.1 tRNAscan-SE exon 3425351 3425426 . - . ID=exon-PUW34_16715-1;Parent=rna-PUW34_16715;anticodon=(pos:complement(3425391..3425393));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16715;product=tRNA-Thr CP118122.1 Genbank gene 3425441 3425556 . - . ID=gene-PUW34_16720;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW34_16720 CP118122.1 cmsearch rRNA 3425441 3425556 . - . ID=rna-PUW34_16720;Parent=gene-PUW34_16720;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_16720;product=5S ribosomal RNA CP118122.1 cmsearch exon 3425441 3425556 . - . ID=exon-PUW34_16720-1;Parent=rna-PUW34_16720;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_16720;product=5S ribosomal RNA CP118122.1 Genbank gene 3425753 3428741 . - . ID=gene-PUW34_16725;Name=PUW34_16725;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_16725 CP118122.1 cmsearch rRNA 3425753 3428741 . - . ID=rna-PUW34_16725;Parent=gene-PUW34_16725;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_16725;product=23S ribosomal RNA CP118122.1 cmsearch exon 3425753 3428741 . - . ID=exon-PUW34_16725-1;Parent=rna-PUW34_16725;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_16725;product=23S ribosomal RNA CP118122.1 Genbank gene 3428924 3428999 . - . ID=gene-PUW34_16730;Name=PUW34_16730;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_16730 CP118122.1 tRNAscan-SE tRNA 3428924 3428999 . - . ID=rna-PUW34_16730;Parent=gene-PUW34_16730;anticodon=(pos:complement(3428964..3428966));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16730;product=tRNA-Ala CP118122.1 tRNAscan-SE exon 3428924 3428999 . - . ID=exon-PUW34_16730-1;Parent=rna-PUW34_16730;anticodon=(pos:complement(3428964..3428966));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16730;product=tRNA-Ala CP118122.1 Genbank gene 3429111 3429187 . - . ID=gene-PUW34_16735;Name=PUW34_16735;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_16735 CP118122.1 tRNAscan-SE tRNA 3429111 3429187 . - . ID=rna-PUW34_16735;Parent=gene-PUW34_16735;anticodon=(pos:complement(3429151..3429153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16735;product=tRNA-Ile CP118122.1 tRNAscan-SE exon 3429111 3429187 . - . ID=exon-PUW34_16735-1;Parent=rna-PUW34_16735;anticodon=(pos:complement(3429151..3429153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_16735;product=tRNA-Ile CP118122.1 Genbank gene 3429257 3430798 . - . ID=gene-PUW34_16740;Name=PUW34_16740;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_16740 CP118122.1 cmsearch rRNA 3429257 3430798 . - . ID=rna-PUW34_16740;Parent=gene-PUW34_16740;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_16740;product=16S ribosomal RNA CP118122.1 cmsearch exon 3429257 3430798 . - . ID=exon-PUW34_16740-1;Parent=rna-PUW34_16740;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_16740;product=16S ribosomal RNA CP118122.1 Genbank gene 3431181 3432032 . - . ID=gene-PUW34_16745;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=PUW34_16745 CP118122.1 Protein Homology CDS 3431181 3432032 . - 0 ID=cds-WJG96116.1;Parent=gene-PUW34_16745;Dbxref=NCBI_GP:WJG96116.1;Name=WJG96116.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=PUW34_16745;product=glutamate racemase;protein_id=WJG96116.1;transl_table=11 CP118122.1 Genbank pseudogene 3431977 3433821 . - . ID=gene-PUW34_16750;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=pseudogene;locus_tag=PUW34_16750;pseudo=true CP118122.1 Protein Homology CDS 3431977 3433821 . - 0 ID=cds-PUW34_16750;Parent=gene-PUW34_16750;Note=internal stop;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=PUW34_16750;product=TonB-dependent vitamin B12 receptor BtuB;pseudo=true;transl_table=11 CP118122.1 cmsearch riboswitch 3433887 3434080 . - . ID=id-CP118122.1:3433887..3434080;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118122.1 Genbank gene 3434195 3435295 . + . ID=gene-PUW34_16755;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=PUW34_16755 CP118122.1 Protein Homology CDS 3434195 3435295 . + 0 ID=cds-WJG96117.1;Parent=gene-PUW34_16755;Dbxref=NCBI_GP:WJG96117.1;Name=WJG96117.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=PUW34_16755;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WJG96117.1;transl_table=11 CP118122.1 Genbank pseudogene 3435345 3435701 . - . ID=gene-PUW34_16760;Name=PUW34_16760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_16760;pseudo=true CP118122.1 Protein Homology CDS 3435345 3435701 . - 0 ID=cds-PUW34_16760;Parent=gene-PUW34_16760;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=PUW34_16760;product=YijD family membrane protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3435717 3436352 . - . ID=gene-PUW34_16765;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=PUW34_16765 CP118122.1 Protein Homology CDS 3435717 3436352 . - 0 ID=cds-WJG96118.1;Parent=gene-PUW34_16765;Dbxref=NCBI_GP:WJG96118.1;Name=WJG96118.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=PUW34_16765;product=HTH-type transcriptional repressor FabR;protein_id=WJG96118.1;transl_table=11 CP118122.1 Genbank gene 3436551 3437951 . + . ID=gene-PUW34_16770;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=PUW34_16770 CP118122.1 Protein Homology CDS 3436551 3437951 . + 0 ID=cds-WJG96119.1;Parent=gene-PUW34_16770;Dbxref=NCBI_GP:WJG96119.1;Name=WJG96119.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=PUW34_16770;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WJG96119.1;transl_table=11 CP118122.1 Genbank gene 3437934 3438851 . - . ID=gene-PUW34_16775;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=PUW34_16775 CP118122.1 Protein Homology CDS 3437934 3438851 . - 0 ID=cds-WJG96120.1;Parent=gene-PUW34_16775;Dbxref=NCBI_GP:WJG96120.1;Name=WJG96120.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=PUW34_16775;product=DNA-binding transcriptional regulator OxyR;protein_id=WJG96120.1;transl_table=11 CP118122.1 Genbank gene 3439135 3440511 . - . ID=gene-PUW34_16780;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=PUW34_16780 CP118122.1 Protein Homology CDS 3439135 3440511 . - 0 ID=cds-WJG96121.1;Parent=gene-PUW34_16780;Dbxref=NCBI_GP:WJG96121.1;Name=WJG96121.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=PUW34_16780;product=argininosuccinate lyase;protein_id=WJG96121.1;transl_table=11 CP118122.1 Genbank gene 3440629 3441405 . - . ID=gene-PUW34_16785;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=PUW34_16785 CP118122.1 Protein Homology CDS 3440629 3441405 . - 0 ID=cds-WJG96122.1;Parent=gene-PUW34_16785;Dbxref=NCBI_GP:WJG96122.1;Name=WJG96122.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=PUW34_16785;product=acetylglutamate kinase;protein_id=WJG96122.1;transl_table=11 CP118122.1 Genbank pseudogene 3441413 3442416 . - . ID=gene-PUW34_16790;Name=argC;gbkey=Gene;gene=argC;gene_biotype=pseudogene;locus_tag=PUW34_16790;pseudo=true CP118122.1 Protein Homology CDS 3441413 3442416 . - 0 ID=cds-PUW34_16790;Parent=gene-PUW34_16790;Note=frameshifted;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=PUW34_16790;product=N-acetyl-gamma-glutamyl-phosphate reductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3442505 3443656 . + . ID=gene-PUW34_16795;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=PUW34_16795 CP118122.1 Protein Homology CDS 3442505 3443656 . + 0 ID=cds-WJG96123.1;Parent=gene-PUW34_16795;Dbxref=NCBI_GP:WJG96123.1;Name=WJG96123.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=PUW34_16795;product=acetylornithine deacetylase;protein_id=WJG96123.1;transl_table=11 CP118122.1 Genbank gene 3444025 3446676 . + . ID=gene-PUW34_16800;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=PUW34_16800 CP118122.1 Protein Homology CDS 3444025 3446676 . + 0 ID=cds-WJG96124.1;Parent=gene-PUW34_16800;Dbxref=NCBI_GP:WJG96124.1;Name=WJG96124.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=PUW34_16800;product=phosphoenolpyruvate carboxylase;protein_id=WJG96124.1;transl_table=11 CP118122.1 Genbank pseudogene 3446887 3448619 . + . ID=gene-PUW34_16805;Name=PUW34_16805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_16805;pseudo=true CP118122.1 Protein Homology CDS 3446887 3448619 . + 0 ID=cds-PUW34_16805;Parent=gene-PUW34_16805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=PUW34_16805;product=phosphoethanolamine transferase CptA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3448780 3449631 . + . ID=gene-PUW34_16810;Name=PUW34_16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16810 CP118122.1 Protein Homology CDS 3448780 3449631 . + 0 ID=cds-WJG96125.1;Parent=gene-PUW34_16810;Dbxref=NCBI_GP:WJG96125.1;Name=WJG96125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=PUW34_16810;product=AraC family transcriptional regulator;protein_id=WJG96125.1;transl_table=11 CP118122.1 Genbank gene 3449618 3449971 . - . ID=gene-PUW34_16815;Name=PUW34_16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16815 CP118122.1 Protein Homology CDS 3449618 3449971 . - 0 ID=cds-WJG96126.1;Parent=gene-PUW34_16815;Dbxref=NCBI_GP:WJG96126.1;Name=WJG96126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=PUW34_16815;product=PTS fructose-like transporter subunit IIB;protein_id=WJG96126.1;transl_table=11 CP118122.1 Genbank gene 3449973 3450851 . - . ID=gene-PUW34_16820;Name=PUW34_16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16820 CP118122.1 Protein Homology CDS 3449973 3450851 . - 0 ID=cds-WJG96127.1;Parent=gene-PUW34_16820;Dbxref=NCBI_GP:WJG96127.1;Name=WJG96127.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=PUW34_16820;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WJG96127.1;transl_table=11 CP118122.1 Genbank pseudogene 3450817 3453113 . - . ID=gene-PUW34_16825;Name=PUW34_16825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_16825;pseudo=true CP118122.1 Protein Homology CDS 3450817 3453113 . - 0 ID=cds-PUW34_16825;Parent=gene-PUW34_16825;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=PUW34_16825;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3453212 3453532 . - . ID=gene-PUW34_16830;Name=PUW34_16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16830 CP118122.1 Protein Homology CDS 3453212 3453532 . - 0 ID=cds-WJG96128.1;Parent=gene-PUW34_16830;Dbxref=NCBI_GP:WJG96128.1;Name=WJG96128.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=PUW34_16830;product=PTS fructose-like transporter subunit IIB;protein_id=WJG96128.1;transl_table=11 CP118122.1 Genbank gene 3453547 3454626 . - . ID=gene-PUW34_16835;Name=PUW34_16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16835 CP118122.1 Protein Homology CDS 3453547 3454626 . - 0 ID=cds-WJG96129.1;Parent=gene-PUW34_16835;Dbxref=NCBI_GP:WJG96129.1;Name=WJG96129.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=PUW34_16835;product=PTS fructose transporter subunit EIIC;protein_id=WJG96129.1;transl_table=11 CP118122.1 Genbank pseudogene 3454935 3457436 . + . ID=gene-PUW34_16840;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=pseudogene;locus_tag=PUW34_16840;pseudo=true CP118122.1 Protein Homology CDS 3454935 3457436 . + 0 ID=cds-PUW34_16840;Parent=gene-PUW34_16840;Note=internal stop;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=PUW34_16840;product=phosphoenolpyruvate--protein phosphotransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3457447 3458109 . + . ID=gene-PUW34_16845;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=PUW34_16845 CP118122.1 Protein Homology CDS 3457447 3458109 . + 0 ID=cds-WJG96130.1;Parent=gene-PUW34_16845;Dbxref=NCBI_GP:WJG96130.1;Name=WJG96130.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=PUW34_16845;product=fructose-6-phosphate aldolase;protein_id=WJG96130.1;transl_table=11 CP118122.1 Genbank gene 3458121 3459224 . + . ID=gene-PUW34_16850;Name=PUW34_16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16850 CP118122.1 Protein Homology CDS 3458121 3459224 . + 0 ID=cds-WJG96131.1;Parent=gene-PUW34_16850;Dbxref=NCBI_GP:WJG96131.1;Name=WJG96131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=PUW34_16850;product=glycerol dehydrogenase;protein_id=WJG96131.1;transl_table=11 CP118122.1 Genbank gene 3459483 3460106 . + . ID=gene-PUW34_16855;Name=PUW34_16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16855 CP118122.1 Protein Homology CDS 3459483 3460106 . + 0 ID=cds-WJG96132.1;Parent=gene-PUW34_16855;Dbxref=NCBI_GP:WJG96132.1;Name=WJG96132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=PUW34_16855;product=DUF1287 domain-containing protein;protein_id=WJG96132.1;transl_table=11 CP118122.1 Genbank gene 3460164 3462344 . - . ID=gene-PUW34_16860;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=PUW34_16860 CP118122.1 Protein Homology CDS 3460164 3462344 . - 0 ID=cds-WJG96133.1;Parent=gene-PUW34_16860;Dbxref=NCBI_GP:WJG96133.1;Name=WJG96133.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=PUW34_16860;product=catalase/peroxidase HPI;protein_id=WJG96133.1;transl_table=11 CP118122.1 Genbank gene 3462509 3463399 . - . ID=gene-PUW34_16865;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=PUW34_16865 CP118122.1 Protein Homology CDS 3462509 3463399 . - 0 ID=cds-WJG96134.1;Parent=gene-PUW34_16865;Dbxref=NCBI_GP:WJG96134.1;Name=WJG96134.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=PUW34_16865;product=methylenetetrahydrofolate reductase;protein_id=WJG96134.1;transl_table=11 CP118122.1 Genbank gene 3463678 3465159 . + . ID=gene-PUW34_16870;Name=PUW34_16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16870 CP118122.1 Protein Homology CDS 3463678 3465159 . + 0 ID=cds-WJG96135.1;Parent=gene-PUW34_16870;Dbxref=NCBI_GP:WJG96135.1;Name=WJG96135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090461.1;locus_tag=PUW34_16870;product=PLP-dependent aminotransferase family protein;protein_id=WJG96135.1;transl_table=11 CP118122.1 Genbank gene 3465104 3466180 . - . ID=gene-PUW34_16875;Name=PUW34_16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16875 CP118122.1 Protein Homology CDS 3465104 3466180 . - 0 ID=cds-WJG96136.1;Parent=gene-PUW34_16875;Dbxref=NCBI_GP:WJG96136.1;Name=WJG96136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976816.1;locus_tag=PUW34_16875;product=alanine racemase 3;protein_id=WJG96136.1;transl_table=11 CP118122.1 Genbank gene 3466177 3467415 . - . ID=gene-PUW34_16880;Name=PUW34_16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16880 CP118122.1 Protein Homology CDS 3466177 3467415 . - 0 ID=cds-WJG96137.1;Parent=gene-PUW34_16880;Dbxref=NCBI_GP:WJG96137.1;Name=WJG96137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341216.1;locus_tag=PUW34_16880;product=serine hydroxymethyltransferase;protein_id=WJG96137.1;transl_table=11 CP118122.1 Genbank gene 3467679 3469235 . - . ID=gene-PUW34_16885;Name=PUW34_16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16885 CP118122.1 Protein Homology CDS 3467679 3469235 . - 0 ID=cds-WJG96138.1;Parent=gene-PUW34_16885;Dbxref=NCBI_GP:WJG96138.1;Name=WJG96138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=PUW34_16885;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WJG96138.1;transl_table=11 CP118122.1 Genbank gene 3469371 3470495 . + . ID=gene-PUW34_16890;Name=PUW34_16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16890 CP118122.1 Protein Homology CDS 3469371 3470495 . + 0 ID=cds-WJG96139.1;Parent=gene-PUW34_16890;Dbxref=NCBI_GP:WJG96139.1;Name=WJG96139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=PUW34_16890;product=cytoplasmic protein;protein_id=WJG96139.1;transl_table=11 CP118122.1 Genbank gene 3470730 3471728 . + . ID=gene-PUW34_16895;Name=PUW34_16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16895 CP118122.1 Protein Homology CDS 3470730 3471728 . + 0 ID=cds-WJG96140.1;Parent=gene-PUW34_16895;Dbxref=NCBI_GP:WJG96140.1;Name=WJG96140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=PUW34_16895;product=hypothetical protein;protein_id=WJG96140.1;transl_table=11 CP118122.1 Genbank gene 3471731 3472588 . + . ID=gene-PUW34_16900;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=PUW34_16900 CP118122.1 Protein Homology CDS 3471731 3472588 . + 0 ID=cds-WJG96141.1;Parent=gene-PUW34_16900;Dbxref=NCBI_GP:WJG96141.1;Name=WJG96141.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=PUW34_16900;product=small-conductance mechanosensitive channel MscS;protein_id=WJG96141.1;transl_table=11 CP118122.1 Genbank pseudogene 3472704 3475134 . - . ID=gene-PUW34_16905;Name=PUW34_16905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_16905;pseudo=true CP118122.1 Protein Homology CDS 3472704 3475134 . - 0 ID=cds-PUW34_16905;Parent=gene-PUW34_16905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=PUW34_16905;product=bifunctional aspartate kinase/homoserine dehydrogenase II;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3475137 3476297 . - . ID=gene-PUW34_16910;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=PUW34_16910 CP118122.1 Protein Homology CDS 3475137 3476297 . - 0 ID=cds-WJG99023.1;Parent=gene-PUW34_16910;Dbxref=NCBI_GP:WJG99023.1;Name=WJG99023.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=PUW34_16910;product=cystathionine gamma-synthase;protein_id=WJG99023.1;transl_table=11 CP118122.1 Genbank gene 3476562 3476879 . + . ID=gene-PUW34_16915;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=PUW34_16915 CP118122.1 Protein Homology CDS 3476562 3476879 . + 0 ID=cds-WJG96142.1;Parent=gene-PUW34_16915;Dbxref=NCBI_GP:WJG96142.1;Name=WJG96142.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=PUW34_16915;product=met regulon transcriptional regulator MetJ;protein_id=WJG96142.1;transl_table=11 CP118122.1 Genbank pseudogene 3477335 3479123 . + . ID=gene-PUW34_16920;Name=PUW34_16920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_16920;pseudo=true CP118122.1 Protein Homology CDS 3477335 3479123 . + 0 ID=cds-PUW34_16920;Parent=gene-PUW34_16920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=PUW34_16920;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3479324 3479986 . + . ID=gene-PUW34_16925;Name=PUW34_16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16925 CP118122.1 Protein Homology CDS 3479324 3479986 . + 0 ID=cds-WJG96143.1;Parent=gene-PUW34_16925;Dbxref=NCBI_GP:WJG96143.1;Name=WJG96143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=PUW34_16925;product=TIGR02117 family protein;protein_id=WJG96143.1;transl_table=11 CP118122.1 Genbank gene 3480031 3480243 . - . ID=gene-PUW34_16930;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=PUW34_16930 CP118122.1 Protein Homology CDS 3480031 3480243 . - 0 ID=cds-WJG99024.1;Parent=gene-PUW34_16930;Dbxref=NCBI_GP:WJG99024.1;Name=WJG99024.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmE;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=PUW34_16930;product=50S ribosomal protein L31;protein_id=WJG99024.1;transl_table=11 CP118122.1 Genbank gene 3480447 3482645 . + . ID=gene-PUW34_16935;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=PUW34_16935 CP118122.1 Protein Homology CDS 3480447 3482645 . + 0 ID=cds-WJG96144.1;Parent=gene-PUW34_16935;Dbxref=NCBI_GP:WJG96144.1;Name=WJG96144.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=PUW34_16935;product=primosomal protein N';protein_id=WJG96144.1;transl_table=11 CP118122.1 Genbank gene 3482800 3483825 . + . ID=gene-PUW34_16940;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=PUW34_16940 CP118122.1 Protein Homology CDS 3482800 3483825 . + 0 ID=cds-WJG96145.1;Parent=gene-PUW34_16940;Dbxref=NCBI_GP:WJG96145.1;Name=WJG96145.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=PUW34_16940;product=DNA-binding transcriptional regulator CytR;protein_id=WJG96145.1;transl_table=11 CP118122.1 Genbank gene 3483919 3484893 . + . ID=gene-PUW34_16945;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=PUW34_16945 CP118122.1 Protein Homology CDS 3483919 3484893 . + 0 ID=cds-WJG96146.1;Parent=gene-PUW34_16945;Dbxref=NCBI_GP:WJG96146.1;Name=WJG96146.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=PUW34_16945;product=cell division protein FtsN;protein_id=WJG96146.1;transl_table=11 CP118122.1 Genbank pseudogene 3484985 3485514 . + . ID=gene-PUW34_16950;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=pseudogene;locus_tag=PUW34_16950;pseudo=true CP118122.1 Protein Homology CDS 3484985 3485514 . + 0 ID=cds-PUW34_16950;Parent=gene-PUW34_16950;Note=frameshifted;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=PUW34_16950;product=ATP-dependent protease subunit HslV;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3485524 3486855 . + . ID=gene-PUW34_16955;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=PUW34_16955 CP118122.1 Protein Homology CDS 3485524 3486855 . + 0 ID=cds-WJG96147.1;Parent=gene-PUW34_16955;Dbxref=NCBI_GP:WJG96147.1;Name=WJG96147.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=PUW34_16955;product=HslU--HslV peptidase ATPase subunit;protein_id=WJG96147.1;transl_table=11 CP118122.1 Genbank gene 3486922 3487851 . + . ID=gene-PUW34_16960;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=PUW34_16960 CP118122.1 Protein Homology CDS 3486922 3487851 . + 0 ID=cds-WJG96148.1;Parent=gene-PUW34_16960;Dbxref=NCBI_GP:WJG96148.1;Name=WJG96148.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=PUW34_16960;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WJG96148.1;transl_table=11 CP118122.1 Genbank gene 3487944 3488429 . + . ID=gene-PUW34_16965;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=PUW34_16965 CP118122.1 Protein Homology CDS 3487944 3488429 . + 0 ID=cds-WJG96149.1;Parent=gene-PUW34_16965;Dbxref=NCBI_GP:WJG96149.1;Name=WJG96149.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=PUW34_16965;product=ribonuclease E activity regulator RraA;protein_id=WJG96149.1;transl_table=11 CP118122.1 Genbank gene 3488651 3488890 . - . ID=gene-PUW34_16970;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=PUW34_16970 CP118122.1 Protein Homology CDS 3488651 3488890 . - 0 ID=cds-WJG96150.1;Parent=gene-PUW34_16970;Dbxref=NCBI_GP:WJG96150.1;Name=WJG96150.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=PUW34_16970;product=septal ring assembly protein ZapB;protein_id=WJG96150.1;transl_table=11 CP118122.1 Genbank gene 3489289 3490134 . + . ID=gene-PUW34_16975;Name=PUW34_16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16975 CP118122.1 Protein Homology CDS 3489289 3490134 . + 0 ID=cds-WJG96151.1;Parent=gene-PUW34_16975;Dbxref=NCBI_GP:WJG96151.1;Name=WJG96151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=PUW34_16975;product=aquaporin;protein_id=WJG96151.1;transl_table=11 CP118122.1 Genbank gene 3490155 3491663 . + . ID=gene-PUW34_16980;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=PUW34_16980 CP118122.1 Protein Homology CDS 3490155 3491663 . + 0 ID=cds-WJG96152.1;Parent=gene-PUW34_16980;Dbxref=NCBI_GP:WJG96152.1;Name=WJG96152.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=PUW34_16980;product=glycerol kinase GlpK;protein_id=WJG96152.1;transl_table=11 CP118122.1 Genbank gene 3491775 3492785 . + . ID=gene-PUW34_16985;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=PUW34_16985 CP118122.1 Protein Homology CDS 3491775 3492785 . + 0 ID=cds-WJG96153.1;Parent=gene-PUW34_16985;Dbxref=NCBI_GP:WJG96153.1;Name=WJG96153.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=PUW34_16985;product=class II fructose-bisphosphatase;protein_id=WJG96153.1;transl_table=11 CP118122.1 Genbank gene 3492882 3493628 . + . ID=gene-PUW34_16990;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=PUW34_16990 CP118122.1 Protein Homology CDS 3492882 3493628 . + 0 ID=cds-WJG96154.1;Parent=gene-PUW34_16990;Dbxref=NCBI_GP:WJG96154.1;Name=WJG96154.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=PUW34_16990;product=ferredoxin--NADP(+) reductase;protein_id=WJG96154.1;transl_table=11 CP118122.1 Genbank gene 3493734 3494162 . - . ID=gene-PUW34_16995;Name=PUW34_16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_16995 CP118122.1 Protein Homology CDS 3493734 3494162 . - 0 ID=cds-WJG96155.1;Parent=gene-PUW34_16995;Dbxref=NCBI_GP:WJG96155.1;Name=WJG96155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006724708.1;locus_tag=PUW34_16995;product=DUF805 domain-containing protein;protein_id=WJG96155.1;transl_table=11 CP118122.1 Genbank gene 3494263 3494859 . + . ID=gene-PUW34_17000;Name=PUW34_17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17000 CP118122.1 Protein Homology CDS 3494263 3494859 . + 0 ID=cds-WJG96156.1;Parent=gene-PUW34_17000;Dbxref=NCBI_GP:WJG96156.1;Name=WJG96156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=PUW34_17000;product=YiiQ family protein;protein_id=WJG96156.1;transl_table=11 CP118122.1 Genbank gene 3494972 3495739 . + . ID=gene-PUW34_17005;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=PUW34_17005 CP118122.1 Protein Homology CDS 3494972 3495739 . + 0 ID=cds-WJG96157.1;Parent=gene-PUW34_17005;Dbxref=NCBI_GP:WJG96157.1;Name=WJG96157.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=PUW34_17005;product=triose-phosphate isomerase;protein_id=WJG96157.1;transl_table=11 CP118122.1 Genbank gene 3495831 3496595 . - . ID=gene-PUW34_17010;Name=PUW34_17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17010 CP118122.1 Protein Homology CDS 3495831 3496595 . - 0 ID=cds-WJG96158.1;Parent=gene-PUW34_17010;Dbxref=NCBI_GP:WJG96158.1;Name=WJG96158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=PUW34_17010;product=epimerase;protein_id=WJG96158.1;transl_table=11 CP118122.1 Genbank gene 3496605 3496895 . - . ID=gene-PUW34_17015;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=PUW34_17015 CP118122.1 Protein Homology CDS 3496605 3496895 . - 0 ID=cds-WJG99025.1;Parent=gene-PUW34_17015;Dbxref=NCBI_GP:WJG99025.1;Name=WJG99025.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=PUW34_17015;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WJG99025.1;transl_table=11 CP118122.1 Genbank gene 3496977 3497852 . - . ID=gene-PUW34_17020;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=PUW34_17020 CP118122.1 Protein Homology CDS 3496977 3497852 . - 0 ID=cds-WJG96159.1;Parent=gene-PUW34_17020;Dbxref=NCBI_GP:WJG96159.1;Name=WJG96159.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=PUW34_17020;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WJG96159.1;transl_table=11 CP118122.1 Genbank gene 3497881 3498903 . - . ID=gene-PUW34_17025;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=PUW34_17025 CP118122.1 Protein Homology CDS 3497881 3498903 . - 0 ID=cds-WJG96160.1;Parent=gene-PUW34_17025;Dbxref=NCBI_GP:WJG96160.1;Name=WJG96160.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=PUW34_17025;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WJG96160.1;transl_table=11 CP118122.1 Genbank gene 3498932 3499933 . - . ID=gene-PUW34_17030;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=PUW34_17030 CP118122.1 Protein Homology CDS 3498932 3499933 . - 0 ID=cds-WJG96161.1;Parent=gene-PUW34_17030;Dbxref=NCBI_GP:WJG96161.1;Name=WJG96161.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=PUW34_17030;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WJG96161.1;transl_table=11 CP118122.1 Genbank pseudogene 3499930 3500972 . - . ID=gene-PUW34_17035;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=pseudogene;locus_tag=PUW34_17035;pseudo=true CP118122.1 Protein Homology CDS 3499930 3500972 . - 0 ID=cds-PUW34_17035;Parent=gene-PUW34_17035;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=PUW34_17035;product=autoinducer 2 ABC transporter permease LsrC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3500966 3502501 . - . ID=gene-PUW34_17040;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=PUW34_17040 CP118122.1 Protein Homology CDS 3500966 3502501 . - 0 ID=cds-WJG96162.1;Parent=gene-PUW34_17040;Dbxref=NCBI_GP:WJG96162.1;Name=WJG96162.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=PUW34_17040;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WJG96162.1;transl_table=11 CP118122.1 Genbank gene 3502758 3503717 . + . ID=gene-PUW34_17045;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=PUW34_17045 CP118122.1 Protein Homology CDS 3502758 3503717 . + 0 ID=cds-WJG96163.1;Parent=gene-PUW34_17045;Dbxref=NCBI_GP:WJG96163.1;Name=WJG96163.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=PUW34_17045;product=transcriptional regulator LsrR;protein_id=WJG96163.1;transl_table=11 CP118122.1 Genbank gene 3503804 3505396 . + . ID=gene-PUW34_17050;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=PUW34_17050 CP118122.1 Protein Homology CDS 3503804 3505396 . + 0 ID=cds-WJG96164.1;Parent=gene-PUW34_17050;Dbxref=NCBI_GP:WJG96164.1;Name=WJG96164.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=PUW34_17050;product=autoinducer-2 kinase;protein_id=WJG96164.1;transl_table=11 CP118122.1 Genbank gene 3505410 3505760 . + . ID=gene-PUW34_17055;Name=PUW34_17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17055 CP118122.1 Protein Homology CDS 3505410 3505760 . + 0 ID=cds-WJG96165.1;Parent=gene-PUW34_17055;Dbxref=NCBI_GP:WJG96165.1;Name=WJG96165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=PUW34_17055;product=cupin domain-containing protein;protein_id=WJG96165.1;transl_table=11 CP118122.1 Genbank pseudogene 3505850 3505990 . - . ID=gene-PUW34_17060;Name=PUW34_17060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17060;pseudo=true CP118122.1 Protein Homology CDS 3505850 3505990 . - 0 ID=cds-PUW34_17060;Parent=gene-PUW34_17060;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=PUW34_17060;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3506048 3506167 . - . ID=gene-PUW34_17065;Name=PUW34_17065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17065;pseudo=true CP118122.1 Protein Homology CDS 3506048 3506167 . - 0 ID=cds-PUW34_17065;Parent=gene-PUW34_17065;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=PUW34_17065;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3506265 3506987 . - . ID=gene-PUW34_17070;Name=PUW34_17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17070 CP118122.1 Protein Homology CDS 3506265 3506987 . - 0 ID=cds-WJG96166.1;Parent=gene-PUW34_17070;Dbxref=NCBI_GP:WJG96166.1;Name=WJG96166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=PUW34_17070;product=GntR family transcriptional regulator;protein_id=WJG96166.1;transl_table=11 CP118122.1 Genbank gene 3507050 3508090 . - . ID=gene-PUW34_17075;Name=PUW34_17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17075 CP118122.1 Protein Homology CDS 3507050 3508090 . - 0 ID=cds-WJG96167.1;Parent=gene-PUW34_17075;Dbxref=NCBI_GP:WJG96167.1;Name=WJG96167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=PUW34_17075;product=ADP-ribosylglycohydrolase family protein;protein_id=WJG96167.1;transl_table=11 CP118122.1 Genbank pseudogene 3508100 3509058 . - . ID=gene-PUW34_17080;Name=PUW34_17080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17080;pseudo=true CP118122.1 Protein Homology CDS 3508100 3509058 . - 0 ID=cds-PUW34_17080;Parent=gene-PUW34_17080;Note=frameshifted;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=PUW34_17080;product=aminoimidazole riboside kinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3509069 3510403 . - . ID=gene-PUW34_17085;Name=PUW34_17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17085 CP118122.1 Protein Homology CDS 3509069 3510403 . - 0 ID=cds-WJG96168.1;Parent=gene-PUW34_17085;Dbxref=NCBI_GP:WJG96168.1;Name=WJG96168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=PUW34_17085;product=MFS transporter;protein_id=WJG96168.1;transl_table=11 CP118122.1 Genbank gene 3510666 3511421 . - . ID=gene-PUW34_17090;Name=PUW34_17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17090 CP118122.1 Protein Homology CDS 3510666 3511421 . - 0 ID=cds-WJG96169.1;Parent=gene-PUW34_17090;Dbxref=NCBI_GP:WJG96169.1;Name=WJG96169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=PUW34_17090;product=CDP-diacylglycerol diphosphatase;protein_id=WJG96169.1;transl_table=11 CP118122.1 Genbank gene 3511522 3512511 . - . ID=gene-PUW34_17095;Name=PUW34_17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17095 CP118122.1 Protein Homology CDS 3511522 3512511 . - 0 ID=cds-WJG96170.1;Parent=gene-PUW34_17095;Dbxref=NCBI_GP:WJG96170.1;Name=WJG96170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=PUW34_17095;product=sulfate ABC transporter substrate-binding protein;protein_id=WJG96170.1;transl_table=11 CP118122.1 Genbank gene 3512715 3513677 . - . ID=gene-PUW34_17100;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=PUW34_17100 CP118122.1 Protein Homology CDS 3512715 3513677 . - 0 ID=cds-WJG96171.1;Parent=gene-PUW34_17100;Dbxref=NCBI_GP:WJG96171.1;Name=WJG96171.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=PUW34_17100;product=6-phosphofructokinase;protein_id=WJG96171.1;transl_table=11 CP118122.1 Genbank gene 3513862 3514764 . - . ID=gene-PUW34_17105;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=PUW34_17105 CP118122.1 Protein Homology CDS 3513862 3514764 . - 0 ID=cds-WJG96172.1;Parent=gene-PUW34_17105;Dbxref=NCBI_GP:WJG96172.1;Name=WJG96172.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=PUW34_17105;product=CDF family cation-efflux transporter FieF;protein_id=WJG96172.1;transl_table=11 CP118122.1 Genbank gene 3514911 3515411 . - . ID=gene-PUW34_17110;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=PUW34_17110 CP118122.1 Protein Homology CDS 3514911 3515411 . - 0 ID=cds-WJG96173.1;Parent=gene-PUW34_17110;Dbxref=NCBI_GP:WJG96173.1;Name=WJG96173.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=PUW34_17110;product=cell-envelope stress modulator CpxP;protein_id=WJG96173.1;transl_table=11 CP118122.1 Genbank gene 3515562 3516260 . + . ID=gene-PUW34_17115;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=PUW34_17115 CP118122.1 Protein Homology CDS 3515562 3516260 . + 0 ID=cds-WJG96174.1;Parent=gene-PUW34_17115;Dbxref=NCBI_GP:WJG96174.1;Name=WJG96174.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=PUW34_17115;product=envelope stress response regulator transcription factor CpxR;protein_id=WJG96174.1;transl_table=11 CP118122.1 Genbank gene 3516257 3517630 . + . ID=gene-PUW34_17120;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=PUW34_17120 CP118122.1 Protein Homology CDS 3516257 3517630 . + 0 ID=cds-WJG96175.1;Parent=gene-PUW34_17120;Dbxref=NCBI_GP:WJG96175.1;Name=WJG96175.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=PUW34_17120;product=envelope stress sensor histidine kinase CpxA;protein_id=WJG96175.1;transl_table=11 CP118122.1 Genbank gene 3517678 3517881 . - . ID=gene-PUW34_17125;Name=PUW34_17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17125 CP118122.1 Protein Homology CDS 3517678 3517881 . - 0 ID=cds-WJG96176.1;Parent=gene-PUW34_17125;Dbxref=NCBI_GP:WJG96176.1;Name=WJG96176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=PUW34_17125;product=hypothetical protein;protein_id=WJG96176.1;transl_table=11 CP118122.1 Genbank gene 3518002 3518397 . - . ID=gene-PUW34_17130;Name=PUW34_17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17130 CP118122.1 Protein Homology CDS 3518002 3518397 . - 0 ID=cds-WJG96177.1;Parent=gene-PUW34_17130;Dbxref=NCBI_GP:WJG96177.1;Name=WJG96177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=PUW34_17130;product=nuclear transport factor 2 family protein;protein_id=WJG96177.1;transl_table=11 CP118122.1 Genbank pseudogene 3518409 3519098 . - . ID=gene-PUW34_17135;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=pseudogene;locus_tag=PUW34_17135;pseudo=true CP118122.1 Protein Homology CDS 3518409 3519098 . - 0 ID=cds-PUW34_17135;Parent=gene-PUW34_17135;Note=internal stop;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=PUW34_17135;product=6-hydroxyaminopurine reductase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3519168 3519786 . - . ID=gene-PUW34_17140;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=pseudogene;locus_tag=PUW34_17140;pseudo=true CP118122.1 Protein Homology CDS 3519168 3519786 . - 0 ID=cds-PUW34_17140;Parent=gene-PUW34_17140;Note=frameshifted;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=PUW34_17140;product=superoxide dismutase [Mn];pseudo=true;transl_table=11 CP118122.1 Genbank gene 3520115 3521098 . + . ID=gene-PUW34_17145;Name=PUW34_17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17145 CP118122.1 Protein Homology CDS 3520115 3521098 . + 0 ID=cds-WJG96178.1;Parent=gene-PUW34_17145;Dbxref=NCBI_GP:WJG96178.1;Name=WJG96178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=PUW34_17145;product=TRAP transporter substrate-binding protein;protein_id=WJG96178.1;transl_table=11 CP118122.1 Genbank gene 3521117 3521632 . + . ID=gene-PUW34_17150;Name=PUW34_17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17150 CP118122.1 Protein Homology CDS 3521117 3521632 . + 0 ID=cds-WJG96179.1;Parent=gene-PUW34_17150;Dbxref=NCBI_GP:WJG96179.1;Name=WJG96179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=PUW34_17150;product=TRAP transporter small permease;protein_id=WJG96179.1;transl_table=11 CP118122.1 Genbank gene 3521625 3522932 . + . ID=gene-PUW34_17155;Name=PUW34_17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17155 CP118122.1 Protein Homology CDS 3521625 3522932 . + 0 ID=cds-WJG96180.1;Parent=gene-PUW34_17155;Dbxref=NCBI_GP:WJG96180.1;Name=WJG96180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=PUW34_17155;product=TRAP transporter large permease;protein_id=WJG96180.1;transl_table=11 CP118122.1 Genbank gene 3523089 3523772 . - . ID=gene-PUW34_17160;Name=PUW34_17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17160 CP118122.1 Protein Homology CDS 3523089 3523772 . - 0 ID=cds-WJG96181.1;Parent=gene-PUW34_17160;Dbxref=NCBI_GP:WJG96181.1;Name=WJG96181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=PUW34_17160;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WJG96181.1;transl_table=11 CP118122.1 Genbank gene 3524391 3525425 . + . ID=gene-PUW34_17165;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=PUW34_17165 CP118122.1 Protein Homology CDS 3524391 3525425 . + 0 ID=cds-WJG96182.1;Parent=gene-PUW34_17165;Dbxref=NCBI_GP:WJG96182.1;Name=WJG96182.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=PUW34_17165;product=L-rhamnose/proton symporter RhaT;protein_id=WJG96182.1;transl_table=11 CP118122.1 Genbank pseudogene 3525422 3526269 . - . ID=gene-PUW34_17170;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=pseudogene;locus_tag=PUW34_17170;pseudo=true CP118122.1 Protein Homology CDS 3525422 3526269 . - 0 ID=cds-PUW34_17170;Parent=gene-PUW34_17170;Note=frameshifted;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=PUW34_17170;product=HTH-type transcriptional activator RhaR;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3526422 3527258 . - . ID=gene-PUW34_17175;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=PUW34_17175 CP118122.1 Protein Homology CDS 3526422 3527258 . - 0 ID=cds-WJG96183.1;Parent=gene-PUW34_17175;Dbxref=NCBI_GP:WJG96183.1;Name=WJG96183.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=PUW34_17175;product=HTH-type transcriptional activator RhaS;protein_id=WJG96183.1;transl_table=11 CP118122.1 Genbank pseudogene 3527546 3529014 . + . ID=gene-PUW34_17180;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=pseudogene;locus_tag=PUW34_17180;pseudo=true CP118122.1 Protein Homology CDS 3527546 3529014 . + 0 ID=cds-PUW34_17180;Parent=gene-PUW34_17180;Note=frameshifted;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=PUW34_17180;product=rhamnulokinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3529011 3530270 . + . ID=gene-PUW34_17185;Name=PUW34_17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17185 CP118122.1 Protein Homology CDS 3529011 3530270 . + 0 ID=cds-WJG96184.1;Parent=gene-PUW34_17185;Dbxref=NCBI_GP:WJG96184.1;Name=WJG96184.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=PUW34_17185;product=L-rhamnose isomerase;protein_id=WJG96184.1;transl_table=11 CP118122.1 Genbank gene 3530413 3531240 . + . ID=gene-PUW34_17190;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=PUW34_17190 CP118122.1 Protein Homology CDS 3530413 3531240 . + 0 ID=cds-WJG96185.1;Parent=gene-PUW34_17190;Dbxref=NCBI_GP:WJG96185.1;Name=WJG96185.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=PUW34_17190;product=rhamnulose-1-phosphate aldolase;protein_id=WJG96185.1;transl_table=11 CP118122.1 Genbank pseudogene 3531427 3532514 . + . ID=gene-PUW34_17195;Name=PUW34_17195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17195;pseudo=true CP118122.1 Protein Homology CDS 3531427 3532514 . + 0 ID=cds-PUW34_17195;Parent=gene-PUW34_17195;Note=frameshifted;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012678.2;locus_tag=PUW34_17195;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3532511 3532825 . + . ID=gene-PUW34_17200;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=PUW34_17200 CP118122.1 Protein Homology CDS 3532511 3532825 . + 0 ID=cds-WJG96186.1;Parent=gene-PUW34_17200;Dbxref=NCBI_GP:WJG96186.1;Name=WJG96186.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=PUW34_17200;product=L-rhamnose mutarotase;protein_id=WJG96186.1;transl_table=11 CP118122.1 Genbank gene 3532914 3533462 . - . ID=gene-PUW34_17205;Name=PUW34_17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17205 CP118122.1 Protein Homology CDS 3532914 3533462 . - 0 ID=cds-WJG96187.1;Parent=gene-PUW34_17205;Dbxref=NCBI_GP:WJG96187.1;Name=WJG96187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=PUW34_17205;product=helix-turn-helix domain-containing protein;protein_id=WJG96187.1;transl_table=11 CP118122.1 Genbank gene 3533563 3534222 . + . ID=gene-PUW34_17210;Name=PUW34_17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17210 CP118122.1 Protein Homology CDS 3533563 3534222 . + 0 ID=cds-WJG96188.1;Parent=gene-PUW34_17210;Dbxref=NCBI_GP:WJG96188.1;Name=WJG96188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=PUW34_17210;product=AzlC family ABC transporter permease;protein_id=WJG96188.1;transl_table=11 CP118122.1 Genbank gene 3534222 3534545 . + . ID=gene-PUW34_17215;Name=PUW34_17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17215 CP118122.1 Protein Homology CDS 3534222 3534545 . + 0 ID=cds-WJG96189.1;Parent=gene-PUW34_17215;Dbxref=NCBI_GP:WJG96189.1;Name=WJG96189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=PUW34_17215;product=AzlD domain-containing protein;protein_id=WJG96189.1;transl_table=11 CP118122.1 Genbank gene 3534901 3535968 . - . ID=gene-PUW34_17220;Name=PUW34_17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17220 CP118122.1 Protein Homology CDS 3534901 3535968 . - 0 ID=cds-WJG96190.1;Parent=gene-PUW34_17220;Dbxref=NCBI_GP:WJG96190.1;Name=WJG96190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=PUW34_17220;product=DUF3829 domain-containing protein;protein_id=WJG96190.1;transl_table=11 CP118122.1 Genbank pseudogene 3536150 3537170 . + . ID=gene-PUW34_17225;Name=PUW34_17225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17225;pseudo=true CP118122.1 Protein Homology CDS 3536150 3537170 . + 0 ID=cds-PUW34_17225;Parent=gene-PUW34_17225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=PUW34_17225;product=YiiG family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3537437 3538273 . - . ID=gene-PUW34_17230;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=PUW34_17230 CP118122.1 Protein Homology CDS 3537437 3538273 . - 0 ID=cds-WJG96191.1;Parent=gene-PUW34_17230;Dbxref=NCBI_GP:WJG96191.1;Name=WJG96191.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=PUW34_17230;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WJG96191.1;transl_table=11 CP118122.1 Genbank gene 3538468 3541518 . + . ID=gene-PUW34_17235;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PUW34_17235 CP118122.1 Protein Homology CDS 3538468 3541518 . + 0 ID=cds-WJG96192.1;Parent=gene-PUW34_17235;Dbxref=NCBI_GP:WJG96192.1;Name=WJG96192.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=PUW34_17235;product=formate dehydrogenase-N subunit alpha;protein_id=WJG96192.1;transl_except=(pos:3539053..3539055%2Caa:Sec);transl_table=11 CP118122.1 Genbank gene 3541531 3542433 . + . ID=gene-PUW34_17240;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PUW34_17240 CP118122.1 Protein Homology CDS 3541531 3542433 . + 0 ID=cds-WJG96193.1;Parent=gene-PUW34_17240;Dbxref=NCBI_GP:WJG96193.1;Name=WJG96193.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=PUW34_17240;product=formate dehydrogenase subunit beta;protein_id=WJG96193.1;transl_table=11 CP118122.1 Genbank gene 3542430 3543065 . + . ID=gene-PUW34_17245;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=PUW34_17245 CP118122.1 Protein Homology CDS 3542430 3543065 . + 0 ID=cds-WJG96194.1;Parent=gene-PUW34_17245;Dbxref=NCBI_GP:WJG96194.1;Name=WJG96194.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=PUW34_17245;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WJG96194.1;transl_table=11 CP118122.1 Genbank gene 3543062 3543991 . + . ID=gene-PUW34_17250;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=PUW34_17250 CP118122.1 Protein Homology CDS 3543062 3543991 . + 0 ID=cds-WJG96195.1;Parent=gene-PUW34_17250;Dbxref=NCBI_GP:WJG96195.1;Name=WJG96195.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=PUW34_17250;product=formate dehydrogenase accessory protein FdhE;protein_id=WJG96195.1;transl_table=11 CP118122.1 Genbank gene 3544038 3544328 . - . ID=gene-PUW34_17255;Name=PUW34_17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17255 CP118122.1 Protein Homology CDS 3544038 3544328 . - 0 ID=cds-WJG96196.1;Parent=gene-PUW34_17255;Dbxref=NCBI_GP:WJG96196.1;Name=WJG96196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=PUW34_17255;product=DNA-binding transcriptional regulator;protein_id=WJG96196.1;transl_table=11 CP118122.1 Genbank gene 3544329 3544640 . - . ID=gene-PUW34_17260;Name=PUW34_17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17260 CP118122.1 Protein Homology CDS 3544329 3544640 . - 0 ID=cds-WJG96197.1;Parent=gene-PUW34_17260;Dbxref=NCBI_GP:WJG96197.1;Name=WJG96197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=PUW34_17260;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG96197.1;transl_table=11 CP118122.1 Genbank gene 3544858 3545787 . + . ID=gene-PUW34_17265;Name=PUW34_17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17265 CP118122.1 Protein Homology CDS 3544858 3545787 . + 0 ID=cds-WJG96198.1;Parent=gene-PUW34_17265;Dbxref=NCBI_GP:WJG96198.1;Name=WJG96198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=PUW34_17265;product=alpha/beta hydrolase;protein_id=WJG96198.1;transl_table=11 CP118122.1 Genbank gene 3545873 3546184 . + . ID=gene-PUW34_17270;Name=PUW34_17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17270 CP118122.1 Protein Homology CDS 3545873 3546184 . + 0 ID=cds-WJG96199.1;Parent=gene-PUW34_17270;Dbxref=NCBI_GP:WJG96199.1;Name=WJG96199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=PUW34_17270;product=type II toxin-antitoxin system HigB family toxin;protein_id=WJG96199.1;transl_table=11 CP118122.1 Genbank gene 3546181 3546627 . + . ID=gene-PUW34_17275;Name=PUW34_17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17275 CP118122.1 Protein Homology CDS 3546181 3546627 . + 0 ID=cds-WJG96200.1;Parent=gene-PUW34_17275;Dbxref=NCBI_GP:WJG96200.1;Name=WJG96200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=PUW34_17275;product=type II toxin-antitoxin system HigA family antitoxin;protein_id=WJG96200.1;transl_table=11 CP118122.1 Genbank gene 3546642 3547583 . - . ID=gene-PUW34_17280;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=PUW34_17280 CP118122.1 Protein Homology CDS 3546642 3547583 . - 0 ID=cds-WJG96201.1;Parent=gene-PUW34_17280;Dbxref=NCBI_GP:WJG96201.1;Name=WJG96201.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=PUW34_17280;product=fatty acid biosynthesis protein FabY;protein_id=WJG96201.1;transl_table=11 CP118122.1 Genbank gene 3547628 3548065 . - . ID=gene-PUW34_17285;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=PUW34_17285 CP118122.1 Protein Homology CDS 3547628 3548065 . - 0 ID=cds-WJG96202.1;Parent=gene-PUW34_17285;Dbxref=NCBI_GP:WJG96202.1;Name=WJG96202.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=PUW34_17285;product=D-aminoacyl-tRNA deacylase;protein_id=WJG96202.1;transl_table=11 CP118122.1 Genbank pseudogene 3548062 3548920 . - . ID=gene-PUW34_17290;Name=PUW34_17290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17290;pseudo=true CP118122.1 Protein Homology CDS 3548062 3548920 . - 0 ID=cds-PUW34_17290;Parent=gene-PUW34_17290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=PUW34_17290;product=virulence factor BrkB family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3548914 3549513 . - . ID=gene-PUW34_17295;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=PUW34_17295 CP118122.1 Protein Homology CDS 3548914 3549513 . - 0 ID=cds-WJG96203.1;Parent=gene-PUW34_17295;Dbxref=NCBI_GP:WJG96203.1;Name=WJG96203.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=PUW34_17295;product=glucose-1-phosphatase;protein_id=WJG96203.1;transl_table=11 CP118122.1 Genbank gene 3549704 3550507 . - . ID=gene-PUW34_17300;Name=PUW34_17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17300 CP118122.1 Protein Homology CDS 3549704 3550507 . - 0 ID=cds-WJG96204.1;Parent=gene-PUW34_17300;Dbxref=NCBI_GP:WJG96204.1;Name=WJG96204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=PUW34_17300;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG96204.1;transl_table=11 CP118122.1 Genbank pseudogene 3550541 3551437 . - . ID=gene-PUW34_17305;Name=PUW34_17305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17305;pseudo=true CP118122.1 Protein Homology CDS 3550541 3551437 . - 0 ID=cds-PUW34_17305;Parent=gene-PUW34_17305;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=PUW34_17305;product=sugar kinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3551602 3552498 . + . ID=gene-PUW34_17310;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=PUW34_17310 CP118122.1 Protein Homology CDS 3551602 3552498 . + 0 ID=cds-WJG96205.1;Parent=gene-PUW34_17310;Dbxref=NCBI_GP:WJG96205.1;Name=WJG96205.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=PUW34_17310;product=sulfolactaldehyde 3-reductase;protein_id=WJG96205.1;transl_table=11 CP118122.1 Genbank gene 3552521 3553399 . + . ID=gene-PUW34_17315;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=PUW34_17315 CP118122.1 Protein Homology CDS 3552521 3553399 . + 0 ID=cds-WJG96206.1;Parent=gene-PUW34_17315;Dbxref=NCBI_GP:WJG96206.1;Name=WJG96206.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=PUW34_17315;product=sulfofructosephosphate aldolase;protein_id=WJG96206.1;transl_table=11 CP118122.1 Genbank gene 3553415 3554656 . + . ID=gene-PUW34_17320;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=PUW34_17320 CP118122.1 Protein Homology CDS 3553415 3554656 . + 0 ID=cds-WJG96207.1;Parent=gene-PUW34_17320;Dbxref=NCBI_GP:WJG96207.1;Name=WJG96207.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=PUW34_17320;product=sulfoquinovose isomerase;protein_id=WJG96207.1;transl_table=11 CP118122.1 Genbank gene 3554660 3555517 . + . ID=gene-PUW34_17325;Name=PUW34_17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17325 CP118122.1 Protein Homology CDS 3554660 3555517 . + 0 ID=cds-WJG96208.1;Parent=gene-PUW34_17325;Dbxref=NCBI_GP:WJG96208.1;Name=WJG96208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=PUW34_17325;product=aldose-1-epimerase;protein_id=WJG96208.1;transl_table=11 CP118122.1 Genbank gene 3555561 3557597 . + . ID=gene-PUW34_17330;Name=PUW34_17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17330 CP118122.1 Protein Homology CDS 3555561 3557597 . + 0 ID=cds-WJG96209.1;Parent=gene-PUW34_17330;Dbxref=NCBI_GP:WJG96209.1;Name=WJG96209.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=PUW34_17330;product=alpha-glucosidase;protein_id=WJG96209.1;transl_table=11 CP118122.1 Genbank gene 3557643 3559025 . + . ID=gene-PUW34_17335;Name=PUW34_17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17335 CP118122.1 Protein Homology CDS 3557643 3559025 . + 0 ID=cds-WJG96210.1;Parent=gene-PUW34_17335;Dbxref=NCBI_GP:WJG96210.1;Name=WJG96210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=PUW34_17335;product=MFS transporter;protein_id=WJG96210.1;transl_table=11 CP118122.1 Genbank gene 3559071 3560492 . + . ID=gene-PUW34_17340;Name=PUW34_17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17340 CP118122.1 Protein Homology CDS 3559071 3560492 . + 0 ID=cds-WJG96211.1;Parent=gene-PUW34_17340;Dbxref=NCBI_GP:WJG96211.1;Name=WJG96211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=PUW34_17340;product=MFS transporter;protein_id=WJG96211.1;transl_table=11 CP118122.1 Genbank gene 3560560 3561252 . + . ID=gene-PUW34_17345;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=PUW34_17345 CP118122.1 Protein Homology CDS 3560560 3561252 . + 0 ID=cds-WJG96212.1;Parent=gene-PUW34_17345;Dbxref=NCBI_GP:WJG96212.1;Name=WJG96212.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=PUW34_17345;product=porin OmpL;protein_id=WJG96212.1;transl_table=11 CP118122.1 Genbank gene 3561409 3562257 . + . ID=gene-PUW34_17350;Name=PUW34_17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17350 CP118122.1 Protein Homology CDS 3561409 3562257 . + 0 ID=cds-WJG96213.1;Parent=gene-PUW34_17350;Dbxref=NCBI_GP:WJG96213.1;Name=WJG96213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=PUW34_17350;product=STM4015 family protein;protein_id=WJG96213.1;transl_table=11 CP118122.1 Genbank gene 3562270 3563295 . + . ID=gene-PUW34_17355;Name=PUW34_17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17355 CP118122.1 Protein Homology CDS 3562270 3563295 . + 0 ID=cds-WJG96214.1;Parent=gene-PUW34_17355;Dbxref=NCBI_GP:WJG96214.1;Name=WJG96214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=PUW34_17355;product=STM4014 family protein;protein_id=WJG96214.1;transl_table=11 CP118122.1 Genbank gene 3563288 3564163 . + . ID=gene-PUW34_17360;Name=PUW34_17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17360 CP118122.1 Protein Homology CDS 3563288 3564163 . + 0 ID=cds-WJG96215.1;Parent=gene-PUW34_17360;Dbxref=NCBI_GP:WJG96215.1;Name=WJG96215.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=PUW34_17360;product=STM4013/SEN3800 family hydrolase;protein_id=WJG96215.1;transl_table=11 CP118122.1 Genbank gene 3564165 3565406 . + . ID=gene-PUW34_17365;Name=PUW34_17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17365 CP118122.1 Protein Homology CDS 3564165 3565406 . + 0 ID=cds-WJG96216.1;Parent=gene-PUW34_17365;Dbxref=NCBI_GP:WJG96216.1;Name=WJG96216.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=PUW34_17365;product=STM4012 family radical SAM protein;protein_id=WJG96216.1;transl_table=11 CP118122.1 Genbank gene 3565403 3566281 . + . ID=gene-PUW34_17370;Name=PUW34_17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17370 CP118122.1 Protein Homology CDS 3565403 3566281 . + 0 ID=cds-WJG96217.1;Parent=gene-PUW34_17370;Dbxref=NCBI_GP:WJG96217.1;Name=WJG96217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=PUW34_17370;product=STM4011 family radical SAM protein;protein_id=WJG96217.1;transl_table=11 CP118122.1 Genbank gene 3566266 3567000 . + . ID=gene-PUW34_17375;Name=PUW34_17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17375 CP118122.1 Protein Homology CDS 3566266 3567000 . + 0 ID=cds-WJG96218.1;Parent=gene-PUW34_17375;Dbxref=NCBI_GP:WJG96218.1;Name=WJG96218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=PUW34_17375;product=Cof-type HAD-IIB family hydrolase;protein_id=WJG96218.1;transl_table=11 CP118122.1 Genbank pseudogene 3567055 3568877 . - . ID=gene-PUW34_17380;Name=typA;gbkey=Gene;gene=typA;gene_biotype=pseudogene;locus_tag=PUW34_17380;pseudo=true CP118122.1 Protein Homology CDS 3567055 3568877 . - 0 ID=cds-PUW34_17380;Parent=gene-PUW34_17380;Note=frameshifted;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=PUW34_17380;product=ribosome-dependent GTPase TypA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3569253 3570662 . + . ID=gene-PUW34_17385;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=PUW34_17385 CP118122.1 Protein Homology CDS 3569253 3570662 . + 0 ID=cds-WJG96219.1;Parent=gene-PUW34_17385;Dbxref=NCBI_GP:WJG96219.1;Name=WJG96219.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=PUW34_17385;product=glutamate--ammonia ligase;protein_id=WJG96219.1;transl_table=11 CP118122.1 Genbank gene 3570937 3571986 . + . ID=gene-PUW34_17390;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=PUW34_17390 CP118122.1 Protein Homology CDS 3570937 3571986 . + 0 ID=cds-WJG96220.1;Parent=gene-PUW34_17390;Dbxref=NCBI_GP:WJG96220.1;Name=WJG96220.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=PUW34_17390;product=nitrogen regulation protein NR(II);protein_id=WJG96220.1;transl_table=11 CP118122.1 Genbank gene 3571995 3573404 . + . ID=gene-PUW34_17395;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=PUW34_17395 CP118122.1 Protein Homology CDS 3571995 3573404 . + 0 ID=cds-WJG96221.1;Parent=gene-PUW34_17395;Dbxref=NCBI_GP:WJG96221.1;Name=WJG96221.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=PUW34_17395;product=nitrogen regulation protein NR(I);protein_id=WJG96221.1;transl_table=11 CP118122.1 Genbank gene 3573517 3573627 . + . ID=gene-PUW34_17400;Name=PUW34_17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17400 CP118122.1 Protein Homology CDS 3573517 3573627 . + 0 ID=cds-WJG96222.1;Parent=gene-PUW34_17400;Dbxref=NCBI_GP:WJG96222.1;Name=WJG96222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=PUW34_17400;product=YshB family small membrane protein;protein_id=WJG96222.1;transl_table=11 CP118122.1 Genbank gene 3573717 3575090 . - . ID=gene-PUW34_17405;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=PUW34_17405 CP118122.1 Protein Homology CDS 3573717 3575090 . - 0 ID=cds-WJG99026.1;Parent=gene-PUW34_17405;Dbxref=NCBI_GP:WJG99026.1;Name=WJG99026.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=PUW34_17405;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WJG99026.1;transl_table=11 CP118122.1 Genbank pseudogene 3575279 3575770 . - . ID=gene-PUW34_17410;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=pseudogene;locus_tag=PUW34_17410;pseudo=true CP118122.1 Protein Homology CDS 3575279 3575770 . - 0 ID=cds-PUW34_17410;Parent=gene-PUW34_17410;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121849.1;locus_tag=PUW34_17410;product=Der GTPase-activating protein YihI;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3575894 3576118 . - . ID=gene-PUW34_17415;Name=PUW34_17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17415 CP118122.1 Protein Homology CDS 3575894 3576118 . - 0 ID=cds-WJG96223.1;Parent=gene-PUW34_17415;Dbxref=NCBI_GP:WJG96223.1;Name=WJG96223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=PUW34_17415;product=hypothetical protein;protein_id=WJG96223.1;transl_table=11 CP118122.1 Genbank gene 3576358 3576990 . + . ID=gene-PUW34_17420;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=PUW34_17420 CP118122.1 Protein Homology CDS 3576358 3576990 . + 0 ID=cds-WJG96224.1;Parent=gene-PUW34_17420;Dbxref=NCBI_GP:WJG96224.1;Name=WJG96224.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=PUW34_17420;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WJG96224.1;transl_table=11 CP118122.1 Genbank pseudogene 3577325 3580109 . - . ID=gene-PUW34_17425;Name=polA;gbkey=Gene;gene=polA;gene_biotype=pseudogene;locus_tag=PUW34_17425;pseudo=true CP118122.1 Protein Homology CDS 3577325 3580109 . - 0 ID=cds-PUW34_17425;Parent=gene-PUW34_17425;Note=frameshifted;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=PUW34_17425;product=DNA polymerase I;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3580497 3581405 . + . ID=gene-PUW34_17430;Name=PUW34_17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17430 CP118122.1 Protein Homology CDS 3580497 3581405 . + 0 ID=cds-WJG96225.1;Parent=gene-PUW34_17430;Dbxref=NCBI_GP:WJG96225.1;Name=WJG96225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=PUW34_17430;product=acyltransferase;protein_id=WJG96225.1;transl_table=11 CP118122.1 Genbank gene 3581418 3582041 . - . ID=gene-PUW34_17435;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=PUW34_17435 CP118122.1 Protein Homology CDS 3581418 3582041 . - 0 ID=cds-WJG96226.1;Parent=gene-PUW34_17435;Dbxref=NCBI_GP:WJG96226.1;Name=WJG96226.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=PUW34_17435;product=thiol:disulfide interchange protein DsbA;protein_id=WJG96226.1;transl_table=11 CP118122.1 Genbank gene 3582058 3583044 . - . ID=gene-PUW34_17440;Name=PUW34_17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17440 CP118122.1 Protein Homology CDS 3582058 3583044 . - 0 ID=cds-WJG96227.1;Parent=gene-PUW34_17440;Dbxref=NCBI_GP:WJG96227.1;Name=WJG96227.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=PUW34_17440;product=serine/threonine protein kinase;protein_id=WJG96227.1;transl_table=11 CP118122.1 Genbank gene 3583121 3583390 . - . ID=gene-PUW34_17445;Name=PUW34_17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17445 CP118122.1 Protein Homology CDS 3583121 3583390 . - 0 ID=cds-WJG96228.1;Parent=gene-PUW34_17445;Dbxref=NCBI_GP:WJG96228.1;Name=WJG96228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=PUW34_17445;product=YihD family protein;protein_id=WJG96228.1;transl_table=11 CP118122.1 Genbank gene 3583460 3584044 . + . ID=gene-PUW34_17450;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=PUW34_17450 CP118122.1 Protein Homology CDS 3583460 3584044 . + 0 ID=cds-WJG96229.1;Parent=gene-PUW34_17450;Dbxref=NCBI_GP:WJG96229.1;Name=WJG96229.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=PUW34_17450;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WJG96229.1;transl_table=11 CP118122.1 Genbank gene 3584041 3584556 . + . ID=gene-PUW34_17455;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=PUW34_17455 CP118122.1 Protein Homology CDS 3584041 3584556 . + 0 ID=cds-WJG99027.1;Parent=gene-PUW34_17455;Dbxref=NCBI_GP:WJG99027.1;Name=WJG99027.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=PUW34_17455;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WJG99027.1;transl_table=11 CP118122.1 Genbank gene 3584828 3584943 . - . ID=gene-PUW34_17460;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW34_17460 CP118122.1 cmsearch rRNA 3584828 3584943 . - . ID=rna-PUW34_17460;Parent=gene-PUW34_17460;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17460;product=5S ribosomal RNA CP118122.1 cmsearch exon 3584828 3584943 . - . ID=exon-PUW34_17460-1;Parent=rna-PUW34_17460;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17460;product=5S ribosomal RNA CP118122.1 Genbank gene 3585140 3588128 . - . ID=gene-PUW34_17465;Name=PUW34_17465;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_17465 CP118122.1 cmsearch rRNA 3585140 3588128 . - . ID=rna-PUW34_17465;Parent=gene-PUW34_17465;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17465;product=23S ribosomal RNA CP118122.1 cmsearch exon 3585140 3588128 . - . ID=exon-PUW34_17465-1;Parent=rna-PUW34_17465;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17465;product=23S ribosomal RNA CP118122.1 Genbank gene 3588322 3588397 . - . ID=gene-PUW34_17470;Name=PUW34_17470;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17470 CP118122.1 tRNAscan-SE tRNA 3588322 3588397 . - . ID=rna-PUW34_17470;Parent=gene-PUW34_17470;anticodon=(pos:complement(3588361..3588363));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17470;product=tRNA-Glu CP118122.1 tRNAscan-SE exon 3588322 3588397 . - . ID=exon-PUW34_17470-1;Parent=rna-PUW34_17470;anticodon=(pos:complement(3588361..3588363));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17470;product=tRNA-Glu CP118122.1 Genbank gene 3588483 3590024 . - . ID=gene-PUW34_17475;Name=PUW34_17475;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_17475 CP118122.1 cmsearch rRNA 3588483 3590024 . - . ID=rna-PUW34_17475;Parent=gene-PUW34_17475;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17475;product=16S ribosomal RNA CP118122.1 cmsearch exon 3588483 3590024 . - . ID=exon-PUW34_17475-1;Parent=rna-PUW34_17475;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17475;product=16S ribosomal RNA CP118122.1 Genbank gene 3590647 3592236 . + . ID=gene-PUW34_17480;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=PUW34_17480 CP118122.1 Protein Homology CDS 3590647 3592236 . + 0 ID=cds-WJG96230.1;Parent=gene-PUW34_17480;Dbxref=NCBI_GP:WJG96230.1;Name=WJG96230.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=PUW34_17480;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WJG96230.1;transl_table=11 CP118122.1 Genbank gene 3592248 3593537 . + . ID=gene-PUW34_17485;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=PUW34_17485 CP118122.1 Protein Homology CDS 3592248 3593537 . + 0 ID=cds-WJG96231.1;Parent=gene-PUW34_17485;Dbxref=NCBI_GP:WJG96231.1;Name=WJG96231.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=PUW34_17485;product=phosphoribosylamine--glycine ligase;protein_id=WJG96231.1;transl_table=11 CP118122.1 Genbank gene 3593534 3594859 . - . ID=gene-PUW34_17490;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=PUW34_17490 CP118122.1 Protein Homology CDS 3593534 3594859 . - 0 ID=cds-WJG96232.1;Parent=gene-PUW34_17490;Dbxref=NCBI_GP:WJG96232.1;Name=WJG96232.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=PUW34_17490;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WJG96232.1;transl_table=11 CP118122.1 Genbank gene 3594865 3596262 . - . ID=gene-PUW34_17495;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=PUW34_17495 CP118122.1 Protein Homology CDS 3594865 3596262 . - 0 ID=cds-WJG96233.1;Parent=gene-PUW34_17495;Dbxref=NCBI_GP:WJG96233.1;Name=WJG96233.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=PUW34_17495;product=two-component system sensor histidine kinase ZraS;protein_id=WJG96233.1;transl_table=11 CP118122.1 Genbank gene 3596516 3596971 . + . ID=gene-PUW34_17500;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=PUW34_17500 CP118122.1 Protein Homology CDS 3596516 3596971 . + 0 ID=cds-WJG96234.1;Parent=gene-PUW34_17500;Dbxref=NCBI_GP:WJG96234.1;Name=WJG96234.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=PUW34_17500;product=zinc resistance sensor/chaperone ZraP;protein_id=WJG96234.1;transl_table=11 CP118122.1 Genbank gene 3597013 3597705 . - . ID=gene-PUW34_17505;Name=PUW34_17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17505 CP118122.1 Protein Homology CDS 3597013 3597705 . - 0 ID=cds-WJG96235.1;Parent=gene-PUW34_17505;Dbxref=NCBI_GP:WJG96235.1;Name=WJG96235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=PUW34_17505;product=DUF1481 domain-containing protein;protein_id=WJG96235.1;transl_table=11 CP118122.1 Genbank gene 3597717 3597989 . - . ID=gene-PUW34_17510;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=PUW34_17510 CP118122.1 Protein Homology CDS 3597717 3597989 . - 0 ID=cds-WJG96236.1;Parent=gene-PUW34_17510;Dbxref=NCBI_GP:WJG96236.1;Name=WJG96236.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=PUW34_17510;product=DNA-binding protein HU-alpha;protein_id=WJG96236.1;transl_table=11 CP118122.1 Genbank gene 3598176 3598766 . - . ID=gene-PUW34_17515;Name=PUW34_17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17515 CP118122.1 Protein Homology CDS 3598176 3598766 . - 0 ID=cds-WJG96237.1;Parent=gene-PUW34_17515;Dbxref=NCBI_GP:WJG96237.1;Name=WJG96237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=PUW34_17515;product=YjaG family protein;protein_id=WJG96237.1;transl_table=11 CP118122.1 Genbank gene 3598808 3599479 . - . ID=gene-PUW34_17520;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=PUW34_17520 CP118122.1 Protein Homology CDS 3598808 3599479 . - 0 ID=cds-WJG96238.1;Parent=gene-PUW34_17520;Dbxref=NCBI_GP:WJG96238.1;Name=WJG96238.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=PUW34_17520;product=deoxyribonuclease V;protein_id=WJG96238.1;transl_table=11 CP118122.1 Genbank gene 3599489 3600553 . - . ID=gene-PUW34_17525;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=PUW34_17525 CP118122.1 Protein Homology CDS 3599489 3600553 . - 0 ID=cds-WJG96239.1;Parent=gene-PUW34_17525;Dbxref=NCBI_GP:WJG96239.1;Name=WJG96239.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=PUW34_17525;product=uroporphyrinogen decarboxylase;protein_id=WJG96239.1;transl_table=11 CP118122.1 Genbank gene 3600594 3601367 . - . ID=gene-PUW34_17530;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=PUW34_17530 CP118122.1 Protein Homology CDS 3600594 3601367 . - 0 ID=cds-WJG96240.1;Parent=gene-PUW34_17530;Dbxref=NCBI_GP:WJG96240.1;Name=WJG96240.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=PUW34_17530;product=NAD(+) diphosphatase;protein_id=WJG96240.1;transl_table=11 CP118122.1 Genbank gene 3601460 3601948 . + . ID=gene-PUW34_17535;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=PUW34_17535 CP118122.1 Protein Homology CDS 3601460 3601948 . + 0 ID=cds-WJG96241.1;Parent=gene-PUW34_17535;Dbxref=NCBI_GP:WJG96241.1;Name=WJG96241.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=PUW34_17535;product=sigma D regulator;protein_id=WJG96241.1;transl_table=11 CP118122.1 cmsearch riboswitch 3602063 3602226 . + . ID=id-CP118122.1:3602063..3602226;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118122.1 Genbank gene 3602312 3604207 . + . ID=gene-PUW34_17540;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=PUW34_17540 CP118122.1 Protein Homology CDS 3602312 3604207 . + 0 ID=cds-WJG96242.1;Parent=gene-PUW34_17540;Dbxref=NCBI_GP:WJG96242.1;Name=WJG96242.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=PUW34_17540;product=phosphomethylpyrimidine synthase ThiC;protein_id=WJG96242.1;transl_table=11 CP118122.1 Genbank gene 3604207 3604842 . + . ID=gene-PUW34_17545;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=PUW34_17545 CP118122.1 Protein Homology CDS 3604207 3604842 . + 0 ID=cds-WJG96243.1;Parent=gene-PUW34_17545;Dbxref=NCBI_GP:WJG96243.1;Name=WJG96243.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=PUW34_17545;product=thiamine phosphate synthase;protein_id=WJG96243.1;transl_table=11 CP118122.1 Genbank gene 3604835 3605593 . + . ID=gene-PUW34_17550;Name=PUW34_17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17550 CP118122.1 Protein Homology CDS 3604835 3605593 . + 0 ID=cds-WJG96244.1;Parent=gene-PUW34_17550;Dbxref=NCBI_GP:WJG96244.1;Name=WJG96244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=PUW34_17550;product=HesA/MoeB/ThiF family protein;protein_id=WJG96244.1;transl_table=11 CP118122.1 Genbank gene 3605574 3605774 . + . ID=gene-PUW34_17555;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=PUW34_17555 CP118122.1 Protein Homology CDS 3605574 3605774 . + 0 ID=cds-WJG96245.1;Parent=gene-PUW34_17555;Dbxref=NCBI_GP:WJG96245.1;Name=WJG96245.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=PUW34_17555;product=sulfur carrier protein ThiS;protein_id=WJG96245.1;transl_table=11 CP118122.1 Genbank gene 3605776 3606546 . + . ID=gene-PUW34_17560;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=PUW34_17560 CP118122.1 Protein Homology CDS 3605776 3606546 . + 0 ID=cds-WJG96246.1;Parent=gene-PUW34_17560;Dbxref=NCBI_GP:WJG96246.1;Name=WJG96246.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=PUW34_17560;product=thiazole synthase;protein_id=WJG96246.1;transl_table=11 CP118122.1 Genbank gene 3606543 3607676 . + . ID=gene-PUW34_17565;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=PUW34_17565 CP118122.1 Protein Homology CDS 3606543 3607676 . + 0 ID=cds-WJG96247.1;Parent=gene-PUW34_17565;Dbxref=NCBI_GP:WJG96247.1;Name=WJG96247.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=PUW34_17565;product=2-iminoacetate synthase ThiH;protein_id=WJG96247.1;transl_table=11 CP118122.1 Genbank gene 3607827 3608015 . - . ID=gene-PUW34_17570;Name=PUW34_17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17570 CP118122.1 Protein Homology CDS 3607827 3608015 . - 0 ID=cds-WJG96248.1;Parent=gene-PUW34_17570;Dbxref=NCBI_GP:WJG96248.1;Name=WJG96248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=PUW34_17570;product=hypothetical protein;protein_id=WJG96248.1;transl_table=11 CP118122.1 Genbank pseudogene 3608338 3609319 . - . ID=gene-PUW34_17575;Name=PUW34_17575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17575;pseudo=true CP118122.1 Protein Homology CDS 3608338 3609319 . - 0 ID=cds-PUW34_17575;Parent=gene-PUW34_17575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=PUW34_17575;product=type III secretion system effector arginine glycosyltransferase SseK1;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3609700 3610044 . + . ID=gene-PUW34_17580;Name=PUW34_17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17580 CP118122.1 Protein Homology CDS 3609700 3610044 . + 0 ID=cds-WJG96249.1;Parent=gene-PUW34_17580;Dbxref=NCBI_GP:WJG96249.1;Name=WJG96249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=PUW34_17580;product=cytoplasmic protein;protein_id=WJG96249.1;transl_table=11 CP118122.1 Genbank gene 3610050 3610373 . - . ID=gene-PUW34_17585;Name=PUW34_17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17585 CP118122.1 Protein Homology CDS 3610050 3610373 . - 0 ID=cds-WJG96250.1;Parent=gene-PUW34_17585;Dbxref=NCBI_GP:WJG96250.1;Name=WJG96250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463024.1;locus_tag=PUW34_17585;product=hypothetical protein;protein_id=WJG96250.1;transl_table=11 CP118122.1 Genbank gene 3610415 3614638 . - . ID=gene-PUW34_17590;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=PUW34_17590 CP118122.1 Protein Homology CDS 3610415 3614638 . - 0 ID=cds-WJG96251.1;Parent=gene-PUW34_17590;Dbxref=NCBI_GP:WJG96251.1;Name=WJG96251.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=PUW34_17590;product=DNA-directed RNA polymerase subunit beta';protein_id=WJG96251.1;transl_table=11 CP118122.1 Genbank gene 3614715 3618743 . - . ID=gene-PUW34_17595;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=PUW34_17595 CP118122.1 Protein Homology CDS 3614715 3618743 . - 0 ID=cds-WJG96252.1;Parent=gene-PUW34_17595;Dbxref=NCBI_GP:WJG96252.1;Name=WJG96252.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=PUW34_17595;product=DNA-directed RNA polymerase subunit beta;protein_id=WJG96252.1;transl_table=11 CP118122.1 Genbank gene 3619061 3619426 . - . ID=gene-PUW34_17600;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=PUW34_17600 CP118122.1 Protein Homology CDS 3619061 3619426 . - 0 ID=cds-WJG96253.1;Parent=gene-PUW34_17600;Dbxref=NCBI_GP:WJG96253.1;Name=WJG96253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=PUW34_17600;product=50S ribosomal protein L7/L12;protein_id=WJG96253.1;transl_table=11 CP118122.1 Genbank pseudogene 3619493 3619989 . - . ID=gene-PUW34_17605;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=pseudogene;locus_tag=PUW34_17605;pseudo=true CP118122.1 Protein Homology CDS 3619493 3619989 . - 0 ID=cds-PUW34_17605;Parent=gene-PUW34_17605;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=PUW34_17605;product=50S ribosomal protein L10;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3620405 3621109 . - . ID=gene-PUW34_17610;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=PUW34_17610 CP118122.1 Protein Homology CDS 3620405 3621109 . - 0 ID=cds-WJG96254.1;Parent=gene-PUW34_17610;Dbxref=NCBI_GP:WJG96254.1;Name=WJG96254.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=PUW34_17610;product=50S ribosomal protein L1;protein_id=WJG96254.1;transl_table=11 CP118122.1 Genbank pseudogene 3621113 3621540 . - . ID=gene-PUW34_17615;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=pseudogene;locus_tag=PUW34_17615;pseudo=true CP118122.1 Protein Homology CDS 3621113 3621540 . - 0 ID=cds-PUW34_17615;Parent=gene-PUW34_17615;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=PUW34_17615;product=50S ribosomal protein L11;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3621698 3622243 . - . ID=gene-PUW34_17620;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=PUW34_17620 CP118122.1 Protein Homology CDS 3621698 3622243 . - 0 ID=cds-WJG96255.1;Parent=gene-PUW34_17620;Dbxref=NCBI_GP:WJG96255.1;Name=WJG96255.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=PUW34_17620;product=transcription termination/antitermination protein NusG;protein_id=WJG96255.1;transl_table=11 CP118122.1 Genbank gene 3622245 3622628 . - . ID=gene-PUW34_17625;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=PUW34_17625 CP118122.1 Protein Homology CDS 3622245 3622628 . - 0 ID=cds-WJG96256.1;Parent=gene-PUW34_17625;Dbxref=NCBI_GP:WJG96256.1;Name=WJG96256.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=PUW34_17625;product=preprotein translocase subunit SecE;protein_id=WJG96256.1;transl_table=11 CP118122.1 Genbank gene 3622858 3624042 . - . ID=gene-PUW34_17630;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PUW34_17630 CP118122.1 Protein Homology CDS 3622858 3624042 . - 0 ID=cds-WJG96257.1;Parent=gene-PUW34_17630;Dbxref=NCBI_GP:WJG96257.1;Name=WJG96257.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PUW34_17630;product=elongation factor Tu;protein_id=WJG96257.1;transl_table=11 CP118122.1 Genbank gene 3624158 3624233 . - . ID=gene-PUW34_17635;Name=PUW34_17635;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17635 CP118122.1 tRNAscan-SE tRNA 3624158 3624233 . - . ID=rna-PUW34_17635;Parent=gene-PUW34_17635;anticodon=(pos:complement(3624198..3624200));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17635;product=tRNA-Thr CP118122.1 tRNAscan-SE exon 3624158 3624233 . - . ID=exon-PUW34_17635-1;Parent=rna-PUW34_17635;anticodon=(pos:complement(3624198..3624200));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17635;product=tRNA-Thr CP118122.1 Genbank gene 3624240 3624314 . - . ID=gene-PUW34_17640;Name=PUW34_17640;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17640 CP118122.1 tRNAscan-SE tRNA 3624240 3624314 . - . ID=rna-PUW34_17640;Parent=gene-PUW34_17640;anticodon=(pos:complement(3624279..3624281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17640;product=tRNA-Gly CP118122.1 tRNAscan-SE exon 3624240 3624314 . - . ID=exon-PUW34_17640-1;Parent=rna-PUW34_17640;anticodon=(pos:complement(3624279..3624281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17640;product=tRNA-Gly CP118122.1 Genbank gene 3624431 3624515 . - . ID=gene-PUW34_17645;Name=PUW34_17645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17645 CP118122.1 tRNAscan-SE tRNA 3624431 3624515 . - . ID=rna-PUW34_17645;Parent=gene-PUW34_17645;anticodon=(pos:complement(3624479..3624481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17645;product=tRNA-Tyr CP118122.1 tRNAscan-SE exon 3624431 3624515 . - . ID=exon-PUW34_17645-1;Parent=rna-PUW34_17645;anticodon=(pos:complement(3624479..3624481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17645;product=tRNA-Tyr CP118122.1 Genbank gene 3624524 3624599 . - . ID=gene-PUW34_17650;Name=PUW34_17650;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17650 CP118122.1 tRNAscan-SE tRNA 3624524 3624599 . - . ID=rna-PUW34_17650;Parent=gene-PUW34_17650;anticodon=(pos:complement(3624564..3624566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17650;product=tRNA-Thr CP118122.1 tRNAscan-SE exon 3624524 3624599 . - . ID=exon-PUW34_17650-1;Parent=rna-PUW34_17650;anticodon=(pos:complement(3624564..3624566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17650;product=tRNA-Thr CP118122.1 Genbank gene 3624619 3624792 . + . ID=gene-PUW34_17655;Name=PUW34_17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17655 CP118122.1 Protein Homology CDS 3624619 3624792 . + 0 ID=cds-WJG96258.1;Parent=gene-PUW34_17655;Dbxref=NCBI_GP:WJG96258.1;Name=WJG96258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=PUW34_17655;product=hypothetical protein;protein_id=WJG96258.1;transl_table=11 CP118122.1 Genbank gene 3625001 3625951 . + . ID=gene-PUW34_17660;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=PUW34_17660 CP118122.1 Protein Homology CDS 3625001 3625951 . + 0 ID=cds-WJG96259.1;Parent=gene-PUW34_17660;Dbxref=NCBI_GP:WJG96259.1;Name=WJG96259.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=PUW34_17660;product=type I pantothenate kinase;protein_id=WJG96259.1;transl_table=11 CP118122.1 Genbank gene 3625986 3626948 . - . ID=gene-PUW34_17665;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=PUW34_17665 CP118122.1 Protein Homology CDS 3625986 3626948 . - 0 ID=cds-WJG96260.1;Parent=gene-PUW34_17665;Dbxref=NCBI_GP:WJG96260.1;Name=WJG96260.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=PUW34_17665;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WJG96260.1;transl_table=11 CP118122.1 Genbank gene 3626945 3627973 . - . ID=gene-PUW34_17670;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=PUW34_17670 CP118122.1 Protein Homology CDS 3626945 3627973 . - 0 ID=cds-WJG96261.1;Parent=gene-PUW34_17670;Dbxref=NCBI_GP:WJG96261.1;Name=WJG96261.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=PUW34_17670;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WJG96261.1;transl_table=11 CP118122.1 Genbank gene 3628155 3628270 . - . ID=gene-PUW34_17675;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW34_17675 CP118122.1 cmsearch rRNA 3628155 3628270 . - . ID=rna-PUW34_17675;Parent=gene-PUW34_17675;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17675;product=5S ribosomal RNA CP118122.1 cmsearch exon 3628155 3628270 . - . ID=exon-PUW34_17675-1;Parent=rna-PUW34_17675;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17675;product=5S ribosomal RNA CP118122.1 Genbank gene 3628467 3631455 . - . ID=gene-PUW34_17680;Name=PUW34_17680;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_17680 CP118122.1 cmsearch rRNA 3628467 3631455 . - . ID=rna-PUW34_17680;Parent=gene-PUW34_17680;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17680;product=23S ribosomal RNA CP118122.1 cmsearch exon 3628467 3631455 . - . ID=exon-PUW34_17680-1;Parent=rna-PUW34_17680;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17680;product=23S ribosomal RNA CP118122.1 Genbank gene 3631649 3631724 . - . ID=gene-PUW34_17685;Name=PUW34_17685;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17685 CP118122.1 tRNAscan-SE tRNA 3631649 3631724 . - . ID=rna-PUW34_17685;Parent=gene-PUW34_17685;anticodon=(pos:complement(3631688..3631690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17685;product=tRNA-Glu CP118122.1 tRNAscan-SE exon 3631649 3631724 . - . ID=exon-PUW34_17685-1;Parent=rna-PUW34_17685;anticodon=(pos:complement(3631688..3631690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17685;product=tRNA-Glu CP118122.1 Genbank gene 3631810 3633351 . - . ID=gene-PUW34_17690;Name=PUW34_17690;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_17690 CP118122.1 cmsearch rRNA 3631810 3633351 . - . ID=rna-PUW34_17690;Parent=gene-PUW34_17690;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17690;product=16S ribosomal RNA CP118122.1 cmsearch exon 3631810 3633351 . - . ID=exon-PUW34_17690-1;Parent=rna-PUW34_17690;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_17690;product=16S ribosomal RNA CP118122.1 Genbank gene 3633729 3634274 . - . ID=gene-PUW34_17695;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=PUW34_17695 CP118122.1 Protein Homology CDS 3633729 3634274 . - 0 ID=cds-WJG96262.1;Parent=gene-PUW34_17695;Dbxref=NCBI_GP:WJG96262.1;Name=WJG96262.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=PUW34_17695;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WJG96262.1;transl_table=11 CP118122.1 Genbank gene 3634286 3635737 . - . ID=gene-PUW34_17700;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=PUW34_17700 CP118122.1 Protein Homology CDS 3634286 3635737 . - 0 ID=cds-WJG96263.1;Parent=gene-PUW34_17700;Dbxref=NCBI_GP:WJG96263.1;Name=WJG96263.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=PUW34_17700;product=Trk system potassium transporter TrkH;protein_id=WJG96263.1;transl_table=11 CP118122.1 Genbank gene 3635776 3636390 . - . ID=gene-PUW34_17705;Name=PUW34_17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17705 CP118122.1 Protein Homology CDS 3635776 3636390 . - 0 ID=cds-WJG96264.1;Parent=gene-PUW34_17705;Dbxref=NCBI_GP:WJG96264.1;Name=WJG96264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=PUW34_17705;product=IMPACT family protein;protein_id=WJG96264.1;transl_table=11 CP118122.1 Genbank gene 3636390 3637721 . - . ID=gene-PUW34_17710;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=PUW34_17710 CP118122.1 Protein Homology CDS 3636390 3637721 . - 0 ID=cds-WJG96265.1;Parent=gene-PUW34_17710;Dbxref=NCBI_GP:WJG96265.1;Name=WJG96265.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=PUW34_17710;product=Xaa-Pro dipeptidase;protein_id=WJG96265.1;transl_table=11 CP118122.1 Genbank pseudogene 3637895 3640083 . + . ID=gene-PUW34_17715;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=pseudogene;locus_tag=PUW34_17715;pseudo=true CP118122.1 Protein Homology CDS 3637895 3640083 . + 0 ID=cds-PUW34_17715;Parent=gene-PUW34_17715;Note=frameshifted;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=PUW34_17715;product=fatty acid oxidation complex subunit alpha FadB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3640093 3641256 . + . ID=gene-PUW34_17720;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=PUW34_17720 CP118122.1 Protein Homology CDS 3640093 3641256 . + 0 ID=cds-WJG96266.1;Parent=gene-PUW34_17720;Dbxref=NCBI_GP:WJG96266.1;Name=WJG96266.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=PUW34_17720;product=acetyl-CoA C-acyltransferase FadA;protein_id=WJG96266.1;transl_table=11 CP118122.1 Genbank gene 3641453 3643276 . - . ID=gene-PUW34_17725;Name=PUW34_17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17725 CP118122.1 Protein Homology CDS 3641453 3643276 . - 0 ID=cds-WJG96267.1;Parent=gene-PUW34_17725;Dbxref=NCBI_GP:WJG96267.1;Name=WJG96267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=PUW34_17725;product=aryl-sulfate sulfotransferase;protein_id=WJG96267.1;transl_table=11 CP118122.1 Genbank gene 3643530 3644231 . - . ID=gene-PUW34_17730;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=PUW34_17730 CP118122.1 Protein Homology CDS 3643530 3644231 . - 0 ID=cds-WJG96268.1;Parent=gene-PUW34_17730;Dbxref=NCBI_GP:WJG96268.1;Name=WJG96268.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=PUW34_17730;product=NAD(P)H-flavin reductase;protein_id=WJG96268.1;transl_table=11 CP118122.1 Genbank gene 3644317 3645795 . - . ID=gene-PUW34_17735;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=PUW34_17735 CP118122.1 Protein Homology CDS 3644317 3645795 . - 0 ID=cds-WJG96269.1;Parent=gene-PUW34_17735;Dbxref=NCBI_GP:WJG96269.1;Name=WJG96269.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=PUW34_17735;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WJG96269.1;transl_table=11 CP118122.1 Genbank gene 3645981 3646469 . + . ID=gene-PUW34_17740;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=PUW34_17740 CP118122.1 Protein Homology CDS 3645981 3646469 . + 0 ID=cds-WJG96270.1;Parent=gene-PUW34_17740;Dbxref=NCBI_GP:WJG96270.1;Name=WJG96270.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=PUW34_17740;product=transcription/translation regulatory transformer protein RfaH;protein_id=WJG96270.1;transl_table=11 CP118122.1 Genbank gene 3646477 3647259 . - . ID=gene-PUW34_17745;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=PUW34_17745 CP118122.1 Protein Homology CDS 3646477 3647259 . - 0 ID=cds-WJG96271.1;Parent=gene-PUW34_17745;Dbxref=NCBI_GP:WJG96271.1;Name=WJG96271.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=PUW34_17745;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WJG96271.1;transl_table=11 CP118122.1 Genbank gene 3647301 3648080 . - . ID=gene-PUW34_17750;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=PUW34_17750 CP118122.1 Protein Homology CDS 3647301 3648080 . - 0 ID=cds-WJG96272.1;Parent=gene-PUW34_17750;Dbxref=NCBI_GP:WJG96272.1;Name=WJG96272.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=PUW34_17750;product=Sec-independent protein translocase subunit TatC;protein_id=WJG96272.1;transl_table=11 CP118122.1 Genbank gene 3648083 3648631 . - . ID=gene-PUW34_17755;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=PUW34_17755 CP118122.1 Protein Homology CDS 3648083 3648631 . - 0 ID=cds-WJG96273.1;Parent=gene-PUW34_17755;Dbxref=NCBI_GP:WJG96273.1;Name=WJG96273.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=PUW34_17755;product=Sec-independent protein translocase protein TatB;protein_id=WJG96273.1;transl_table=11 CP118122.1 Genbank gene 3648635 3648889 . - . ID=gene-PUW34_17760;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=PUW34_17760 CP118122.1 Protein Homology CDS 3648635 3648889 . - 0 ID=cds-WJG96274.1;Parent=gene-PUW34_17760;Dbxref=NCBI_GP:WJG96274.1;Name=WJG96274.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=PUW34_17760;product=Sec-independent protein translocase subunit TatA;protein_id=WJG96274.1;transl_table=11 CP118122.1 Genbank gene 3649095 3650735 . - . ID=gene-PUW34_17765;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=PUW34_17765 CP118122.1 Protein Homology CDS 3649095 3650735 . - 0 ID=cds-WJG96275.1;Parent=gene-PUW34_17765;Dbxref=NCBI_GP:WJG96275.1;Name=WJG96275.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=PUW34_17765;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WJG96275.1;transl_table=11 CP118122.1 Genbank gene 3650732 3651337 . - . ID=gene-PUW34_17770;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=PUW34_17770 CP118122.1 Protein Homology CDS 3650732 3651337 . - 0 ID=cds-WJG96276.1;Parent=gene-PUW34_17770;Dbxref=NCBI_GP:WJG96276.1;Name=WJG96276.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=PUW34_17770;product=ubiquinone biosynthesis protein UbiJ;protein_id=WJG96276.1;transl_table=11 CP118122.1 Genbank gene 3651347 3652102 . - . ID=gene-PUW34_17775;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=PUW34_17775 CP118122.1 Protein Homology CDS 3651347 3652102 . - 0 ID=cds-WJG96277.1;Parent=gene-PUW34_17775;Dbxref=NCBI_GP:WJG96277.1;Name=WJG96277.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=PUW34_17775;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WJG96277.1;transl_table=11 CP118122.1 Genbank gene 3652198 3653628 . - . ID=gene-PUW34_17780;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=PUW34_17780 CP118122.1 Protein Homology CDS 3652198 3653628 . - 0 ID=cds-WJG96278.1;Parent=gene-PUW34_17780;Dbxref=NCBI_GP:WJG96278.1;Name=WJG96278.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=PUW34_17780;product=DNA recombination protein RmuC;protein_id=WJG96278.1;transl_table=11 CP118122.1 Genbank gene 3653768 3654529 . - . ID=gene-PUW34_17785;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=PUW34_17785 CP118122.1 Protein Homology CDS 3653768 3654529 . - 0 ID=cds-WJG96279.1;Parent=gene-PUW34_17785;Dbxref=NCBI_GP:WJG96279.1;Name=WJG96279.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=PUW34_17785;product=uridine phosphorylase;protein_id=WJG96279.1;transl_table=11 CP118122.1 Genbank gene 3654788 3655600 . + . ID=gene-PUW34_17790;Name=PUW34_17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17790 CP118122.1 Protein Homology CDS 3654788 3655600 . + 0 ID=cds-WJG96280.1;Parent=gene-PUW34_17790;Dbxref=NCBI_GP:WJG96280.1;Name=WJG96280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=PUW34_17790;product=dienelactone hydrolase family protein;protein_id=WJG96280.1;transl_table=11 CP118122.1 Genbank gene 3655680 3657023 . - . ID=gene-PUW34_17795;Name=PUW34_17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17795 CP118122.1 Protein Homology CDS 3655680 3657023 . - 0 ID=cds-WJG96281.1;Parent=gene-PUW34_17795;Dbxref=NCBI_GP:WJG96281.1;Name=WJG96281.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=PUW34_17795;product=anaerobic sulfatase maturase;protein_id=WJG96281.1;transl_table=11 CP118122.1 Genbank pseudogene 3657367 3659630 . - . ID=gene-PUW34_17800;Name=metE;gbkey=Gene;gene=metE;gene_biotype=pseudogene;locus_tag=PUW34_17800;pseudo=true CP118122.1 Protein Homology CDS 3657367 3659630 . - 0 ID=cds-PUW34_17800;Parent=gene-PUW34_17800;Note=frameshifted;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=PUW34_17800;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3659879 3660832 . + . ID=gene-PUW34_17805;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=PUW34_17805 CP118122.1 Protein Homology CDS 3659879 3660832 . + 0 ID=cds-WJG96282.1;Parent=gene-PUW34_17805;Dbxref=NCBI_GP:WJG96282.1;Name=WJG96282.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=PUW34_17805;product=HTH-type transcriptional regulator MetR;protein_id=WJG96282.1;transl_table=11 CP118122.1 Genbank gene 3660720 3661619 . - . ID=gene-PUW34_17810;Name=PUW34_17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17810 CP118122.1 Protein Homology CDS 3660720 3661619 . - 0 ID=cds-WJG96283.1;Parent=gene-PUW34_17810;Dbxref=NCBI_GP:WJG96283.1;Name=WJG96283.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=PUW34_17810;product=carboxylate/amino acid/amine transporter;protein_id=WJG96283.1;transl_table=11 CP118122.1 Genbank gene 3661700 3662500 . - . ID=gene-PUW34_17815;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=PUW34_17815 CP118122.1 Protein Homology CDS 3661700 3662500 . - 0 ID=cds-WJG96284.1;Parent=gene-PUW34_17815;Dbxref=NCBI_GP:WJG96284.1;Name=WJG96284.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=PUW34_17815;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WJG96284.1;transl_table=11 CP118122.1 Genbank gene 3662516 3663532 . - . ID=gene-PUW34_17820;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=PUW34_17820 CP118122.1 Protein Homology CDS 3662516 3663532 . - 0 ID=cds-WJG96285.1;Parent=gene-PUW34_17820;Dbxref=NCBI_GP:WJG96285.1;Name=WJG96285.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=PUW34_17820;product=lysophospholipase L2;protein_id=WJG96285.1;transl_table=11 CP118122.1 Genbank gene 3663643 3664233 . + . ID=gene-PUW34_17825;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=PUW34_17825 CP118122.1 Protein Homology CDS 3663643 3664233 . + 0 ID=cds-WJG96286.1;Parent=gene-PUW34_17825;Dbxref=NCBI_GP:WJG96286.1;Name=WJG96286.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576440.1;locus_tag=PUW34_17825;product=homoserine/homoserine lactone efflux protein;protein_id=WJG96286.1;transl_table=11 CP118122.1 Genbank gene 3664257 3664877 . - . ID=gene-PUW34_17830;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=PUW34_17830 CP118122.1 Protein Homology CDS 3664257 3664877 . - 0 ID=cds-WJG96287.1;Parent=gene-PUW34_17830;Dbxref=NCBI_GP:WJG96287.1;Name=WJG96287.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=PUW34_17830;product=threonine export protein RhtC;protein_id=WJG96287.1;transl_table=11 CP118122.1 Genbank gene 3664941 3666770 . - . ID=gene-PUW34_17835;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=PUW34_17835 CP118122.1 Protein Homology CDS 3664941 3666770 . - 0 ID=cds-WJG99028.1;Parent=gene-PUW34_17835;Dbxref=NCBI_GP:WJG99028.1;Name=WJG99028.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=PUW34_17835;product=ATP-dependent DNA helicase RecQ;protein_id=WJG99028.1;transl_table=11 CP118122.1 Genbank gene 3666854 3667723 . - . ID=gene-PUW34_17840;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=PUW34_17840 CP118122.1 Protein Homology CDS 3666854 3667723 . - 0 ID=cds-WJG96288.1;Parent=gene-PUW34_17840;Dbxref=NCBI_GP:WJG96288.1;Name=WJG96288.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=PUW34_17840;product=phospholipase A;protein_id=WJG96288.1;transl_table=11 CP118122.1 Genbank gene 3667888 3668355 . + . ID=gene-PUW34_17845;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=PUW34_17845 CP118122.1 Protein Homology CDS 3667888 3668355 . + 0 ID=cds-WJG96289.1;Parent=gene-PUW34_17845;Dbxref=NCBI_GP:WJG96289.1;Name=WJG96289.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=PUW34_17845;product=acyl-CoA thioesterase YigI;protein_id=WJG96289.1;transl_table=11 CP118122.1 Genbank gene 3668399 3669286 . + . ID=gene-PUW34_17850;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PUW34_17850 CP118122.1 Protein Homology CDS 3668399 3669286 . + 0 ID=cds-WJG99029.1;Parent=gene-PUW34_17850;Dbxref=NCBI_GP:WJG99029.1;Name=WJG99029.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=PUW34_17850;product=EamA family transporter RarD;protein_id=WJG99029.1;transl_table=11 CP118122.1 Genbank gene 3669326 3669622 . - . ID=gene-PUW34_17855;Name=PUW34_17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17855 CP118122.1 Protein Homology CDS 3669326 3669622 . - 0 ID=cds-WJG96290.1;Parent=gene-PUW34_17855;Dbxref=NCBI_GP:WJG96290.1;Name=WJG96290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=PUW34_17855;product=hypothetical protein;protein_id=WJG96290.1;transl_table=11 CP118122.1 Genbank gene 3669704 3670177 . + . ID=gene-PUW34_17860;Name=PUW34_17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17860 CP118122.1 Protein Homology CDS 3669704 3670177 . + 0 ID=cds-WJG96291.1;Parent=gene-PUW34_17860;Dbxref=NCBI_GP:WJG96291.1;Name=WJG96291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751908.1;locus_tag=PUW34_17860;product=hypothetical protein;protein_id=WJG96291.1;transl_table=11 CP118122.1 Genbank gene 3670225 3671175 . - . ID=gene-PUW34_17865;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=PUW34_17865 CP118122.1 Protein Homology CDS 3670225 3671175 . - 0 ID=cds-WJG96292.1;Parent=gene-PUW34_17865;Dbxref=NCBI_GP:WJG96292.1;Name=WJG96292.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=PUW34_17865;product=magnesium/cobalt transporter CorA;protein_id=WJG96292.1;transl_table=11 CP118122.1 Genbank gene 3671331 3671387 . - . ID=gene-PUW34_17870;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=PUW34_17870 CP118122.1 Protein Homology CDS 3671331 3671387 . - 0 ID=cds-WJG99030.1;Parent=gene-PUW34_17870;Dbxref=NCBI_GP:WJG99030.1;Name=WJG99030.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=PUW34_17870;product=protein YsgD;protein_id=WJG99030.1;transl_table=11 CP118122.1 Genbank gene 3671647 3673809 . - . ID=gene-PUW34_17875;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=PUW34_17875 CP118122.1 Protein Homology CDS 3671647 3673809 . - 0 ID=cds-WJG96293.1;Parent=gene-PUW34_17875;Dbxref=NCBI_GP:WJG96293.1;Name=WJG96293.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=PUW34_17875;product=DNA helicase II;protein_id=WJG96293.1;transl_table=11 CP118122.1 Genbank gene 3673945 3674661 . - . ID=gene-PUW34_17880;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=PUW34_17880 CP118122.1 Protein Homology CDS 3673945 3674661 . - 0 ID=cds-WJG96294.1;Parent=gene-PUW34_17880;Dbxref=NCBI_GP:WJG96294.1;Name=WJG96294.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=PUW34_17880;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WJG96294.1;transl_table=11 CP118122.1 Genbank gene 3674661 3675563 . - . ID=gene-PUW34_17885;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=PUW34_17885 CP118122.1 Protein Homology CDS 3674661 3675563 . - 0 ID=cds-WJG96295.1;Parent=gene-PUW34_17885;Dbxref=NCBI_GP:WJG96295.1;Name=WJG96295.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=PUW34_17885;product=tyrosine recombinase XerC;protein_id=WJG96295.1;transl_table=11 CP118122.1 Genbank gene 3675560 3676267 . - . ID=gene-PUW34_17890;Name=PUW34_17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17890 CP118122.1 Protein Homology CDS 3675560 3676267 . - 0 ID=cds-WJG96296.1;Parent=gene-PUW34_17890;Dbxref=NCBI_GP:WJG96296.1;Name=WJG96296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=PUW34_17890;product=DUF484 domain-containing protein;protein_id=WJG96296.1;transl_table=11 CP118122.1 Genbank gene 3676264 3677088 . - . ID=gene-PUW34_17895;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=PUW34_17895 CP118122.1 Protein Homology CDS 3676264 3677088 . - 0 ID=cds-WJG99031.1;Parent=gene-PUW34_17895;Dbxref=NCBI_GP:WJG99031.1;Name=WJG99031.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=PUW34_17895;product=diaminopimelate epimerase;protein_id=WJG99031.1;transl_table=11 CP118122.1 Genbank gene 3677125 3677328 . - . ID=gene-PUW34_17900;Name=PUW34_17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17900 CP118122.1 Protein Homology CDS 3677125 3677328 . - 0 ID=cds-WJG96297.1;Parent=gene-PUW34_17900;Dbxref=NCBI_GP:WJG96297.1;Name=WJG96297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=PUW34_17900;product=lipoprotein;protein_id=WJG96297.1;transl_table=11 CP118122.1 Genbank gene 3677514 3677765 . + . ID=gene-PUW34_17905;Name=PUW34_17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17905 CP118122.1 GeneMarkS-2+ CDS 3677514 3677765 . + 0 ID=cds-WJG96298.1;Parent=gene-PUW34_17905;Dbxref=NCBI_GP:WJG96298.1;Name=WJG96298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_17905;product=hypothetical protein;protein_id=WJG96298.1;transl_table=11 CP118122.1 Genbank pseudogene 3677741 3678037 . + . ID=gene-PUW34_17910;Name=PUW34_17910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17910;pseudo=true CP118122.1 Protein Homology CDS 3677741 3678037 . + 0 ID=cds-PUW34_17910;Parent=gene-PUW34_17910;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604297.1;locus_tag=PUW34_17910;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3678025 3678414 . + . ID=gene-PUW34_17915;Name=PUW34_17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17915 CP118122.1 Protein Homology CDS 3678025 3678414 . + 0 ID=cds-WJG96299.1;Parent=gene-PUW34_17915;Dbxref=NCBI_GP:WJG96299.1;Name=WJG96299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=PUW34_17915;product=DUF3021 family protein;protein_id=WJG96299.1;transl_table=11 CP118122.1 Genbank gene 3678484 3678804 . + . ID=gene-PUW34_17920;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=PUW34_17920 CP118122.1 Protein Homology CDS 3678484 3678804 . + 0 ID=cds-WJG96300.1;Parent=gene-PUW34_17920;Dbxref=NCBI_GP:WJG96300.1;Name=WJG96300.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=PUW34_17920;product=iron donor protein CyaY;protein_id=WJG96300.1;transl_table=11 CP118122.1 Genbank gene 3678882 3681428 . - . ID=gene-PUW34_17925;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=PUW34_17925 CP118122.1 Protein Homology CDS 3678882 3681428 . - 0 ID=cds-WJG96301.1;Parent=gene-PUW34_17925;Dbxref=NCBI_GP:WJG96301.1;Name=WJG96301.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=PUW34_17925;product=class I adenylate cyclase;protein_id=WJG96301.1;transl_table=11 CP118122.1 Genbank gene 3681805 3682746 . + . ID=gene-PUW34_17930;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=PUW34_17930 CP118122.1 Protein Homology CDS 3681805 3682746 . + 0 ID=cds-WJG96302.1;Parent=gene-PUW34_17930;Dbxref=NCBI_GP:WJG96302.1;Name=WJG96302.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=PUW34_17930;product=hydroxymethylbilane synthase;protein_id=WJG96302.1;transl_table=11 CP118122.1 Genbank gene 3682743 3683483 . + . ID=gene-PUW34_17935;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=PUW34_17935 CP118122.1 Protein Homology CDS 3682743 3683483 . + 0 ID=cds-WJG96303.1;Parent=gene-PUW34_17935;Dbxref=NCBI_GP:WJG96303.1;Name=WJG96303.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=PUW34_17935;product=uroporphyrinogen-III synthase;protein_id=WJG96303.1;transl_table=11 CP118122.1 Genbank gene 3683505 3684644 . + . ID=gene-PUW34_17940;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=PUW34_17940 CP118122.1 Protein Homology CDS 3683505 3684644 . + 0 ID=cds-WJG96304.1;Parent=gene-PUW34_17940;Dbxref=NCBI_GP:WJG96304.1;Name=WJG96304.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138965.1;locus_tag=PUW34_17940;product=uroporphyrinogen-III C-methyltransferase;protein_id=WJG96304.1;transl_table=11 CP118122.1 Genbank pseudogene 3684647 3685842 . + . ID=gene-PUW34_17945;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=pseudogene;locus_tag=PUW34_17945;pseudo=true CP118122.1 Protein Homology CDS 3684647 3685842 . + 0 ID=cds-PUW34_17945;Parent=gene-PUW34_17945;Note=frameshifted;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=PUW34_17945;product=protoheme IX biogenesis protein HemY;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3686425 3686501 . - . ID=gene-PUW34_17950;Name=PUW34_17950;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17950 CP118122.1 tRNAscan-SE tRNA 3686425 3686501 . - . ID=rna-PUW34_17950;Parent=gene-PUW34_17950;anticodon=(pos:complement(3686465..3686467));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17950;product=tRNA-Pro CP118122.1 tRNAscan-SE exon 3686425 3686501 . - . ID=exon-PUW34_17950-1;Parent=rna-PUW34_17950;anticodon=(pos:complement(3686465..3686467));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17950;product=tRNA-Pro CP118122.1 Genbank gene 3686544 3686630 . - . ID=gene-PUW34_17955;Name=PUW34_17955;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17955 CP118122.1 tRNAscan-SE tRNA 3686544 3686630 . - . ID=rna-PUW34_17955;Parent=gene-PUW34_17955;anticodon=(pos:complement(3686594..3686596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17955;product=tRNA-Leu CP118122.1 tRNAscan-SE exon 3686544 3686630 . - . ID=exon-PUW34_17955-1;Parent=rna-PUW34_17955;anticodon=(pos:complement(3686594..3686596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17955;product=tRNA-Leu CP118122.1 Genbank gene 3686651 3686726 . - . ID=gene-PUW34_17960;Name=PUW34_17960;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17960 CP118122.1 tRNAscan-SE tRNA 3686651 3686726 . - . ID=rna-PUW34_17960;Parent=gene-PUW34_17960;anticodon=(pos:complement(3686691..3686693));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17960;product=tRNA-His CP118122.1 tRNAscan-SE exon 3686651 3686726 . - . ID=exon-PUW34_17960-1;Parent=rna-PUW34_17960;anticodon=(pos:complement(3686691..3686693));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17960;product=tRNA-His CP118122.1 Genbank gene 3686781 3686857 . - . ID=gene-PUW34_17965;Name=PUW34_17965;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_17965 CP118122.1 tRNAscan-SE tRNA 3686781 3686857 . - . ID=rna-PUW34_17965;Parent=gene-PUW34_17965;anticodon=(pos:complement(3686821..3686823));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17965;product=tRNA-Arg CP118122.1 tRNAscan-SE exon 3686781 3686857 . - . ID=exon-PUW34_17965-1;Parent=rna-PUW34_17965;anticodon=(pos:complement(3686821..3686823));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_17965;product=tRNA-Arg CP118122.1 Genbank pseudogene 3686960 3688344 . - . ID=gene-PUW34_17970;Name=PUW34_17970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_17970;pseudo=true CP118122.1 Protein Homology CDS 3686960 3688344 . - 0 ID=cds-PUW34_17970;Parent=gene-PUW34_17970;Note=frameshifted;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=PUW34_17970;product=amino acid permease;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3688551 3689291 . - . ID=gene-PUW34_17975;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=PUW34_17975 CP118122.1 Protein Homology CDS 3688551 3689291 . - 0 ID=cds-WJG96305.1;Parent=gene-PUW34_17975;Dbxref=NCBI_GP:WJG96305.1;Name=WJG96305.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=PUW34_17975;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WJG96305.1;transl_table=11 CP118122.1 Genbank gene 3689288 3690646 . - . ID=gene-PUW34_17980;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=PUW34_17980 CP118122.1 Protein Homology CDS 3689288 3690646 . - 0 ID=cds-WJG96306.1;Parent=gene-PUW34_17980;Dbxref=NCBI_GP:WJG96306.1;Name=WJG96306.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=PUW34_17980;product=ECA oligosaccharide polymerase;protein_id=WJG96306.1;transl_table=11 CP118122.1 Genbank gene 3690643 3691722 . - . ID=gene-PUW34_17985;Name=PUW34_17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_17985 CP118122.1 Protein Homology CDS 3690643 3691722 . - 0 ID=cds-WJG96307.1;Parent=gene-PUW34_17985;Dbxref=NCBI_GP:WJG96307.1;Name=WJG96307.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=PUW34_17985;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WJG96307.1;transl_table=11 CP118122.1 Genbank gene 3691719 3692969 . - . ID=gene-PUW34_17990;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=PUW34_17990 CP118122.1 Protein Homology CDS 3691719 3692969 . - 0 ID=cds-WJG96308.1;Parent=gene-PUW34_17990;Dbxref=NCBI_GP:WJG96308.1;Name=WJG96308.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=PUW34_17990;product=lipid III flippase WzxE;protein_id=WJG96308.1;transl_table=11 CP118122.1 Genbank gene 3692971 3694101 . - . ID=gene-PUW34_17995;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=PUW34_17995 CP118122.1 Protein Homology CDS 3692971 3694101 . - 0 ID=cds-WJG96309.1;Parent=gene-PUW34_17995;Dbxref=NCBI_GP:WJG96309.1;Name=WJG96309.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=PUW34_17995;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WJG96309.1;transl_table=11 CP118122.1 Genbank gene 3694106 3694783 . - . ID=gene-PUW34_18000;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=PUW34_18000 CP118122.1 Protein Homology CDS 3694106 3694783 . - 0 ID=cds-WJG96310.1;Parent=gene-PUW34_18000;Dbxref=NCBI_GP:WJG96310.1;Name=WJG96310.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=PUW34_18000;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WJG96310.1;transl_table=11 CP118122.1 Genbank gene 3694761 3695075 . - . ID=gene-PUW34_18005;Name=PUW34_18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18005 CP118122.1 Protein Homology CDS 3694761 3695075 . - 0 ID=cds-WJG96311.1;Parent=gene-PUW34_18005;Dbxref=NCBI_GP:WJG96311.1;Name=WJG96311.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658205.1;locus_tag=PUW34_18005;product=sugar phosphate nucleotidyltransferase;protein_id=WJG96311.1;transl_table=11 CP118122.1 Genbank gene 3695018 3696085 . - . ID=gene-PUW34_18010;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=PUW34_18010 CP118122.1 Protein Homology CDS 3695018 3696085 . - 0 ID=cds-WJG96312.1;Parent=gene-PUW34_18010;Dbxref=NCBI_GP:WJG96312.1;Name=WJG96312.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=PUW34_18010;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WJG96312.1;transl_table=11 CP118122.1 Genbank gene 3696085 3697347 . - . ID=gene-PUW34_18015;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=PUW34_18015 CP118122.1 Protein Homology CDS 3696085 3697347 . - 0 ID=cds-WJG96313.1;Parent=gene-PUW34_18015;Dbxref=NCBI_GP:WJG96313.1;Name=WJG96313.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=PUW34_18015;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WJG96313.1;transl_table=11 CP118122.1 Genbank gene 3697344 3698474 . - . ID=gene-PUW34_18020;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=PUW34_18020 CP118122.1 Protein Homology CDS 3697344 3698474 . - 0 ID=cds-WJG96314.1;Parent=gene-PUW34_18020;Dbxref=NCBI_GP:WJG96314.1;Name=WJG96314.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=PUW34_18020;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WJG96314.1;transl_table=11 CP118122.1 Genbank gene 3698530 3699576 . - . ID=gene-PUW34_18025;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=PUW34_18025 CP118122.1 Protein Homology CDS 3698530 3699576 . - 0 ID=cds-WJG96315.1;Parent=gene-PUW34_18025;Dbxref=NCBI_GP:WJG96315.1;Name=WJG96315.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=PUW34_18025;product=ECA polysaccharide chain length modulation protein;protein_id=WJG96315.1;transl_table=11 CP118122.1 Genbank gene 3699588 3700691 . - . ID=gene-PUW34_18030;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=PUW34_18030 CP118122.1 Protein Homology CDS 3699588 3700691 . - 0 ID=cds-WJG99032.1;Parent=gene-PUW34_18030;Dbxref=NCBI_GP:WJG99032.1;Name=WJG99032.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=PUW34_18030;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WJG99032.1;transl_table=11 CP118122.1 Genbank gene 3700921 3702180 . - . ID=gene-PUW34_18035;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=PUW34_18035 CP118122.1 Protein Homology CDS 3700921 3702180 . - 0 ID=cds-WJG96316.1;Parent=gene-PUW34_18035;Dbxref=NCBI_GP:WJG96316.1;Name=WJG96316.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=PUW34_18035;product=transcription termination factor Rho;protein_id=WJG96316.1;transl_table=11 CP118122.1 Genbank gene 3702268 3702351 . - . ID=gene-PUW34_18040;Name=PUW34_18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18040 CP118122.1 Protein Homology CDS 3702268 3702351 . - 0 ID=cds-WJG99033.1;Parent=gene-PUW34_18040;Dbxref=NCBI_GP:WJG99033.1;Name=WJG99033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=PUW34_18040;product=rho operon leader peptide;protein_id=WJG99033.1;transl_table=11 CP118122.1 Genbank gene 3702599 3702928 . - . ID=gene-PUW34_18045;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PUW34_18045 CP118122.1 Protein Homology CDS 3702599 3702928 . - 0 ID=cds-WJG96317.1;Parent=gene-PUW34_18045;Dbxref=NCBI_GP:WJG96317.1;Name=WJG96317.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=PUW34_18045;product=thioredoxin TrxA;protein_id=WJG96317.1;transl_table=11 CP118122.1 Genbank gene 3703072 3704337 . + . ID=gene-PUW34_18050;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=PUW34_18050 CP118122.1 Protein Homology CDS 3703072 3704337 . + 0 ID=cds-WJG96318.1;Parent=gene-PUW34_18050;Dbxref=NCBI_GP:WJG96318.1;Name=WJG96318.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=PUW34_18050;product=ATP-dependent RNA helicase RhlB;protein_id=WJG96318.1;transl_table=11 CP118122.1 Genbank gene 3704474 3705955 . + . ID=gene-PUW34_18055;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=PUW34_18055 CP118122.1 Protein Homology CDS 3704474 3705955 . + 0 ID=cds-WJG96319.1;Parent=gene-PUW34_18055;Dbxref=NCBI_GP:WJG96319.1;Name=WJG96319.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=PUW34_18055;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WJG96319.1;transl_table=11 CP118122.1 Genbank gene 3705995 3708019 . - . ID=gene-PUW34_18060;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=PUW34_18060 CP118122.1 Protein Homology CDS 3705995 3708019 . - 0 ID=cds-WJG96320.1;Parent=gene-PUW34_18060;Dbxref=NCBI_GP:WJG96320.1;Name=WJG96320.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=PUW34_18060;product=DNA helicase Rep;protein_id=WJG96320.1;transl_table=11 CP118122.1 Genbank pseudogene 3708119 3708271 . - . ID=gene-PUW34_18065;Name=PUW34_18065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18065;pseudo=true CP118122.1 Protein Homology CDS 3708119 3708271 . - 0 ID=cds-PUW34_18065;Parent=gene-PUW34_18065;Note=involved in nicotinamide riboside transport%3B frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=PUW34_18065;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3708557 3708838 . + . ID=gene-PUW34_18070;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=PUW34_18070 CP118122.1 Protein Homology CDS 3708557 3708838 . + 0 ID=cds-WJG96321.1;Parent=gene-PUW34_18070;Dbxref=NCBI_GP:WJG96321.1;Name=WJG96321.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=PUW34_18070;product=peptidylprolyl isomerase PpiC;protein_id=WJG96321.1;transl_table=11 CP118122.1 Genbank gene 3708930 3710405 . - . ID=gene-PUW34_18075;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=PUW34_18075 CP118122.1 Protein Homology CDS 3708930 3710405 . - 0 ID=cds-WJG96322.1;Parent=gene-PUW34_18075;Dbxref=NCBI_GP:WJG96322.1;Name=WJG96322.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=PUW34_18075;product=ketol-acid reductoisomerase;protein_id=WJG96322.1;transl_table=11 CP118122.1 Genbank gene 3710570 3711457 . + . ID=gene-PUW34_18080;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=PUW34_18080 CP118122.1 Protein Homology CDS 3710570 3711457 . + 0 ID=cds-WJG96323.1;Parent=gene-PUW34_18080;Dbxref=NCBI_GP:WJG96323.1;Name=WJG96323.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=PUW34_18080;product=HTH-type transcriptional activator IlvY;protein_id=WJG96323.1;transl_table=11 CP118122.1 Genbank gene 3711460 3711801 . - . ID=gene-PUW34_18085;Name=PUW34_18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18085 CP118122.1 Protein Homology CDS 3711460 3711801 . - 0 ID=cds-WJG96324.1;Parent=gene-PUW34_18085;Dbxref=NCBI_GP:WJG96324.1;Name=WJG96324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=PUW34_18085;product=helix-turn-helix domain-containing protein;protein_id=WJG96324.1;transl_table=11 CP118122.1 Genbank gene 3711798 3712115 . - . ID=gene-PUW34_18090;Name=PUW34_18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18090 CP118122.1 Protein Homology CDS 3711798 3712115 . - 0 ID=cds-WJG99034.1;Parent=gene-PUW34_18090;Dbxref=NCBI_GP:WJG99034.1;Name=WJG99034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=PUW34_18090;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG99034.1;transl_table=11 CP118122.1 Genbank gene 3712398 3713942 . - . ID=gene-PUW34_18095;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=PUW34_18095 CP118122.1 Protein Homology CDS 3712398 3713942 . - 0 ID=cds-WJG99035.1;Parent=gene-PUW34_18095;Dbxref=NCBI_GP:WJG99035.1;Name=WJG99035.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=PUW34_18095;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WJG99035.1;transl_table=11 CP118122.1 Genbank gene 3713945 3715795 . - . ID=gene-PUW34_18100;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=PUW34_18100 CP118122.1 Protein Homology CDS 3713945 3715795 . - 0 ID=cds-WJG96325.1;Parent=gene-PUW34_18100;Dbxref=NCBI_GP:WJG96325.1;Name=WJG96325.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=PUW34_18100;product=dihydroxy-acid dehydratase;protein_id=WJG96325.1;transl_table=11 CP118122.1 Genbank gene 3715955 3716884 . - . ID=gene-PUW34_18105;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=PUW34_18105 CP118122.1 Protein Homology CDS 3715955 3716884 . - 0 ID=cds-WJG96326.1;Parent=gene-PUW34_18105;Dbxref=NCBI_GP:WJG96326.1;Name=WJG96326.1;Ontology_term=GO:0009082,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=PUW34_18105;product=branched-chain-amino-acid transaminase;protein_id=WJG96326.1;transl_table=11 CP118122.1 Genbank gene 3716902 3717165 . - . ID=gene-PUW34_18110;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=PUW34_18110 CP118122.1 Protein Homology CDS 3716902 3717165 . - 0 ID=cds-WJG96327.1;Parent=gene-PUW34_18110;Dbxref=NCBI_GP:WJG96327.1;Name=WJG96327.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=PUW34_18110;product=acetolactate synthase 2 small subunit;protein_id=WJG96327.1;transl_table=11 CP118122.1 Genbank gene 3717162 3718808 . - . ID=gene-PUW34_18115;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=PUW34_18115 CP118122.1 Protein Homology CDS 3717162 3718808 . - 0 ID=cds-WJG96328.1;Parent=gene-PUW34_18115;Dbxref=NCBI_GP:WJG96328.1;Name=WJG96328.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=PUW34_18115;product=acetolactate synthase 2 catalytic subunit;protein_id=WJG96328.1;transl_table=11 CP118122.1 Genbank gene 3718811 3718861 . - . ID=gene-PUW34_18120;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=PUW34_18120 CP118122.1 Protein Homology CDS 3718811 3718861 . - 0 ID=cds-WJG99036.1;Parent=gene-PUW34_18120;Dbxref=NCBI_GP:WJG99036.1;Name=WJG99036.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=PUW34_18120;product=peptide IlvX;protein_id=WJG99036.1;transl_table=11 CP118122.1 Genbank gene 3718947 3719045 . - . ID=gene-PUW34_18125;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=PUW34_18125 CP118122.1 Protein Homology CDS 3718947 3719045 . - 0 ID=cds-WJG96329.1;Parent=gene-PUW34_18125;Dbxref=NCBI_GP:WJG96329.1;Name=WJG96329.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=PUW34_18125;product=ilv operon leader peptide;protein_id=WJG96329.1;transl_table=11 CP118122.1 Genbank gene 3719397 3720917 . + . ID=gene-PUW34_18130;Name=PUW34_18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18130 CP118122.1 Protein Homology CDS 3719397 3720917 . + 0 ID=cds-WJG96330.1;Parent=gene-PUW34_18130;Dbxref=NCBI_GP:WJG96330.1;Name=WJG96330.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=PUW34_18130;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WJG96330.1;transl_table=11 CP118122.1 Genbank gene 3720942 3721280 . - . ID=gene-PUW34_18135;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=PUW34_18135 CP118122.1 Protein Homology CDS 3720942 3721280 . - 0 ID=cds-WJG96331.1;Parent=gene-PUW34_18135;Dbxref=NCBI_GP:WJG96331.1;Name=WJG96331.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=PUW34_18135;product=macrodomain Ori organization protein MaoP;protein_id=WJG96331.1;transl_table=11 CP118122.1 Genbank gene 3721387 3722235 . + . ID=gene-PUW34_18140;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=PUW34_18140 CP118122.1 Protein Homology CDS 3721387 3722235 . + 0 ID=cds-WJG96332.1;Parent=gene-PUW34_18140;Dbxref=NCBI_GP:WJG96332.1;Name=WJG96332.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=PUW34_18140;product=HTH-type transcriptional regulator HdfR;protein_id=WJG96332.1;transl_table=11 CP118122.1 Genbank gene 3722337 3722411 . - . ID=gene-PUW34_18145;Name=PUW34_18145;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_18145 CP118122.1 tRNAscan-SE tRNA 3722337 3722411 . - . ID=rna-PUW34_18145;Parent=gene-PUW34_18145;anticodon=(pos:complement(3722377..3722379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18145;product=tRNA-Trp CP118122.1 tRNAscan-SE exon 3722337 3722411 . - . ID=exon-PUW34_18145-1;Parent=rna-PUW34_18145;anticodon=(pos:complement(3722377..3722379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18145;product=tRNA-Trp CP118122.1 Genbank gene 3722420 3722496 . - . ID=gene-PUW34_18150;Name=PUW34_18150;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_18150 CP118122.1 tRNAscan-SE tRNA 3722420 3722496 . - . ID=rna-PUW34_18150;Parent=gene-PUW34_18150;anticodon=(pos:complement(3722460..3722462));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18150;product=tRNA-Asp CP118122.1 tRNAscan-SE exon 3722420 3722496 . - . ID=exon-PUW34_18150-1;Parent=rna-PUW34_18150;anticodon=(pos:complement(3722460..3722462));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18150;product=tRNA-Asp CP118122.1 Genbank gene 3722688 3722803 . - . ID=gene-PUW34_18155;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW34_18155 CP118122.1 cmsearch rRNA 3722688 3722803 . - . ID=rna-PUW34_18155;Parent=gene-PUW34_18155;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_18155;product=5S ribosomal RNA CP118122.1 cmsearch exon 3722688 3722803 . - . ID=exon-PUW34_18155-1;Parent=rna-PUW34_18155;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_18155;product=5S ribosomal RNA CP118122.1 Genbank gene 3723000 3725988 . - . ID=gene-PUW34_18160;Name=PUW34_18160;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_18160 CP118122.1 cmsearch rRNA 3723000 3725988 . - . ID=rna-PUW34_18160;Parent=gene-PUW34_18160;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_18160;product=23S ribosomal RNA CP118122.1 cmsearch exon 3723000 3725988 . - . ID=exon-PUW34_18160-1;Parent=rna-PUW34_18160;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_18160;product=23S ribosomal RNA CP118122.1 Genbank gene 3726171 3726246 . - . ID=gene-PUW34_18165;Name=PUW34_18165;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_18165 CP118122.1 tRNAscan-SE tRNA 3726171 3726246 . - . ID=rna-PUW34_18165;Parent=gene-PUW34_18165;anticodon=(pos:complement(3726211..3726213));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18165;product=tRNA-Ala CP118122.1 tRNAscan-SE exon 3726171 3726246 . - . ID=exon-PUW34_18165-1;Parent=rna-PUW34_18165;anticodon=(pos:complement(3726211..3726213));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18165;product=tRNA-Ala CP118122.1 Genbank gene 3726358 3726434 . - . ID=gene-PUW34_18170;Name=PUW34_18170;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_18170 CP118122.1 tRNAscan-SE tRNA 3726358 3726434 . - . ID=rna-PUW34_18170;Parent=gene-PUW34_18170;anticodon=(pos:complement(3726398..3726400));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18170;product=tRNA-Ile CP118122.1 tRNAscan-SE exon 3726358 3726434 . - . ID=exon-PUW34_18170-1;Parent=rna-PUW34_18170;anticodon=(pos:complement(3726398..3726400));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18170;product=tRNA-Ile CP118122.1 Genbank gene 3726504 3728045 . - . ID=gene-PUW34_18175;Name=PUW34_18175;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_18175 CP118122.1 cmsearch rRNA 3726504 3728045 . - . ID=rna-PUW34_18175;Parent=gene-PUW34_18175;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_18175;product=16S ribosomal RNA CP118122.1 cmsearch exon 3726504 3728045 . - . ID=exon-PUW34_18175-1;Parent=rna-PUW34_18175;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_18175;product=16S ribosomal RNA CP118122.1 Genbank gene 3728526 3729230 . + . ID=gene-PUW34_18180;Name=PUW34_18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18180 CP118122.1 Protein Homology CDS 3728526 3729230 . + 0 ID=cds-WJG96333.1;Parent=gene-PUW34_18180;Dbxref=NCBI_GP:WJG96333.1;Name=WJG96333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=PUW34_18180;product=FadR/GntR family transcriptional regulator;protein_id=WJG96333.1;transl_table=11 CP118122.1 Genbank gene 3729242 3730669 . + . ID=gene-PUW34_18185;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=PUW34_18185 CP118122.1 Protein Homology CDS 3729242 3730669 . + 0 ID=cds-WJG96334.1;Parent=gene-PUW34_18185;Dbxref=NCBI_GP:WJG96334.1;Name=WJG96334.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=PUW34_18185;product=multidrug transporter subunit MdtD;protein_id=WJG96334.1;transl_table=11 CP118122.1 Genbank gene 3730635 3731633 . - . ID=gene-PUW34_18190;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=PUW34_18190 CP118122.1 Protein Homology CDS 3730635 3731633 . - 0 ID=cds-WJG96335.1;Parent=gene-PUW34_18190;Dbxref=NCBI_GP:WJG96335.1;Name=WJG96335.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=PUW34_18190;product=ribose operon transcriptional repressor RbsR;protein_id=WJG96335.1;transl_table=11 CP118122.1 Genbank pseudogene 3731637 3732565 . - . ID=gene-PUW34_18195;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=pseudogene;locus_tag=PUW34_18195;pseudo=true CP118122.1 Protein Homology CDS 3731637 3732565 . - 0 ID=cds-PUW34_18195;Parent=gene-PUW34_18195;Note=frameshifted;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=PUW34_18195;product=ribokinase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3732698 3733587 . - . ID=gene-PUW34_18200;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=pseudogene;locus_tag=PUW34_18200;pseudo=true CP118122.1 Protein Homology CDS 3732698 3733587 . - 0 ID=cds-PUW34_18200;Parent=gene-PUW34_18200;Note=frameshifted;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=PUW34_18200;product=ribose ABC transporter substrate-binding protein RbsB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3733612 3734577 . - . ID=gene-PUW34_18205;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=PUW34_18205 CP118122.1 Protein Homology CDS 3733612 3734577 . - 0 ID=cds-WJG96336.1;Parent=gene-PUW34_18205;Dbxref=NCBI_GP:WJG96336.1;Name=WJG96336.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=PUW34_18205;product=ribose ABC transporter permease;protein_id=WJG96336.1;transl_table=11 CP118122.1 Genbank pseudogene 3734583 3736088 . - . ID=gene-PUW34_18210;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=pseudogene;locus_tag=PUW34_18210;pseudo=true CP118122.1 Protein Homology CDS 3734583 3736088 . - 0 ID=cds-PUW34_18210;Parent=gene-PUW34_18210;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=PUW34_18210;product=ribose ABC transporter ATP-binding protein RbsA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3736096 3736515 . - . ID=gene-PUW34_18215;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=PUW34_18215 CP118122.1 Protein Homology CDS 3736096 3736515 . - 0 ID=cds-WJG96337.1;Parent=gene-PUW34_18215;Dbxref=NCBI_GP:WJG96337.1;Name=WJG96337.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=PUW34_18215;product=D-ribose pyranase;protein_id=WJG96337.1;transl_table=11 CP118122.1 Genbank gene 3736732 3738600 . - . ID=gene-PUW34_18220;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=PUW34_18220 CP118122.1 Protein Homology CDS 3736732 3738600 . - 0 ID=cds-WJG96338.1;Parent=gene-PUW34_18220;Dbxref=NCBI_GP:WJG96338.1;Name=WJG96338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=PUW34_18220;product=low affinity potassium transporter Kup;protein_id=WJG96338.1;transl_table=11 CP118122.1 Genbank gene 3738944 3740440 . + . ID=gene-PUW34_18225;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=PUW34_18225 CP118122.1 Protein Homology CDS 3738944 3740440 . + 0 ID=cds-WJG96339.1;Parent=gene-PUW34_18225;Dbxref=NCBI_GP:WJG96339.1;Name=WJG96339.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=PUW34_18225;product=ATPase RavA;protein_id=WJG96339.1;transl_table=11 CP118122.1 Genbank gene 3740434 3741885 . + . ID=gene-PUW34_18230;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=PUW34_18230 CP118122.1 Protein Homology CDS 3740434 3741885 . + 0 ID=cds-WJG96340.1;Parent=gene-PUW34_18230;Dbxref=NCBI_GP:WJG96340.1;Name=WJG96340.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=PUW34_18230;product=ATPase RavA stimulator ViaA;protein_id=WJG96340.1;transl_table=11 CP118122.1 Genbank pseudogene 3741890 3742882 . - . ID=gene-PUW34_18235;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=pseudogene;locus_tag=PUW34_18235;pseudo=true CP118122.1 Protein Homology CDS 3741890 3742882 . - 0 ID=cds-PUW34_18235;Parent=gene-PUW34_18235;Note=internal stop;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=PUW34_18235;product=aspartate--ammonia ligase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3743033 3743491 . + . ID=gene-PUW34_18240;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=PUW34_18240 CP118122.1 Protein Homology CDS 3743033 3743491 . + 0 ID=cds-WJG96341.1;Parent=gene-PUW34_18240;Dbxref=NCBI_GP:WJG96341.1;Name=WJG96341.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=PUW34_18240;product=transcriptional regulator AsnC;protein_id=WJG96341.1;transl_table=11 CP118122.1 Genbank gene 3743581 3744024 . + . ID=gene-PUW34_18245;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=PUW34_18245 CP118122.1 Protein Homology CDS 3743581 3744024 . + 0 ID=cds-WJG96342.1;Parent=gene-PUW34_18245;Dbxref=NCBI_GP:WJG96342.1;Name=WJG96342.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=PUW34_18245;product=FMN-binding protein MioC;protein_id=WJG96342.1;transl_table=11 CP118122.1 Genbank gene 3744403 3746292 . + . ID=gene-PUW34_18250;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=PUW34_18250 CP118122.1 Protein Homology CDS 3744403 3746292 . + 0 ID=cds-WJG96343.1;Parent=gene-PUW34_18250;Dbxref=NCBI_GP:WJG96343.1;Name=WJG96343.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=PUW34_18250;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WJG96343.1;transl_table=11 CP118122.1 Genbank gene 3746395 3747018 . + . ID=gene-PUW34_18255;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=PUW34_18255 CP118122.1 Protein Homology CDS 3746395 3747018 . + 0 ID=cds-WJG96344.1;Parent=gene-PUW34_18255;Dbxref=NCBI_GP:WJG96344.1;Name=WJG96344.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=PUW34_18255;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WJG96344.1;transl_table=11 CP118122.1 Genbank gene 3747634 3748014 . + . ID=gene-PUW34_18260;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=PUW34_18260 CP118122.1 Protein Homology CDS 3747634 3748014 . + 0 ID=cds-WJG96345.1;Parent=gene-PUW34_18260;Dbxref=NCBI_GP:WJG96345.1;Name=WJG96345.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=PUW34_18260;product=F0F1 ATP synthase subunit I;protein_id=WJG96345.1;transl_table=11 CP118122.1 Genbank gene 3748023 3748838 . + . ID=gene-PUW34_18265;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=PUW34_18265 CP118122.1 Protein Homology CDS 3748023 3748838 . + 0 ID=cds-WJG96346.1;Parent=gene-PUW34_18265;Dbxref=NCBI_GP:WJG96346.1;Name=WJG96346.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=PUW34_18265;product=F0F1 ATP synthase subunit A;protein_id=WJG96346.1;transl_table=11 CP118122.1 Genbank gene 3748885 3749124 . + . ID=gene-PUW34_18270;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=PUW34_18270 CP118122.1 Protein Homology CDS 3748885 3749124 . + 0 ID=cds-WJG96347.1;Parent=gene-PUW34_18270;Dbxref=NCBI_GP:WJG96347.1;Name=WJG96347.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=PUW34_18270;product=F0F1 ATP synthase subunit C;protein_id=WJG96347.1;transl_table=11 CP118122.1 Genbank gene 3749184 3749654 . + . ID=gene-PUW34_18275;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=PUW34_18275 CP118122.1 Protein Homology CDS 3749184 3749654 . + 0 ID=cds-WJG96348.1;Parent=gene-PUW34_18275;Dbxref=NCBI_GP:WJG96348.1;Name=WJG96348.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=PUW34_18275;product=F0F1 ATP synthase subunit B;protein_id=WJG96348.1;transl_table=11 CP118122.1 Genbank gene 3749669 3750202 . + . ID=gene-PUW34_18280;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=PUW34_18280 CP118122.1 Protein Homology CDS 3749669 3750202 . + 0 ID=cds-WJG96349.1;Parent=gene-PUW34_18280;Dbxref=NCBI_GP:WJG96349.1;Name=WJG96349.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=PUW34_18280;product=F0F1 ATP synthase subunit delta;protein_id=WJG96349.1;transl_table=11 CP118122.1 Genbank gene 3750215 3751756 . + . ID=gene-PUW34_18285;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=PUW34_18285 CP118122.1 Protein Homology CDS 3750215 3751756 . + 0 ID=cds-WJG96350.1;Parent=gene-PUW34_18285;Dbxref=NCBI_GP:WJG96350.1;Name=WJG96350.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=PUW34_18285;product=F0F1 ATP synthase subunit alpha;protein_id=WJG96350.1;transl_table=11 CP118122.1 Genbank gene 3751807 3752670 . + . ID=gene-PUW34_18290;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=PUW34_18290 CP118122.1 Protein Homology CDS 3751807 3752670 . + 0 ID=cds-WJG96351.1;Parent=gene-PUW34_18290;Dbxref=NCBI_GP:WJG96351.1;Name=WJG96351.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=PUW34_18290;product=F0F1 ATP synthase subunit gamma;protein_id=WJG96351.1;transl_table=11 CP118122.1 Genbank gene 3752697 3754079 . + . ID=gene-PUW34_18295;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=PUW34_18295 CP118122.1 Protein Homology CDS 3752697 3754079 . + 0 ID=cds-WJG96352.1;Parent=gene-PUW34_18295;Dbxref=NCBI_GP:WJG96352.1;Name=WJG96352.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=PUW34_18295;product=F0F1 ATP synthase subunit beta;protein_id=WJG96352.1;transl_table=11 CP118122.1 Genbank gene 3754100 3754519 . + . ID=gene-PUW34_18300;Name=PUW34_18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18300 CP118122.1 Protein Homology CDS 3754100 3754519 . + 0 ID=cds-WJG96353.1;Parent=gene-PUW34_18300;Dbxref=NCBI_GP:WJG96353.1;Name=WJG96353.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=PUW34_18300;product=F0F1 ATP synthase subunit epsilon;protein_id=WJG96353.1;transl_table=11 CP118122.1 Genbank gene 3754749 3755447 . + . ID=gene-PUW34_18305;Name=PUW34_18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18305 CP118122.1 Protein Homology CDS 3754749 3755447 . + 0 ID=cds-WJG96354.1;Parent=gene-PUW34_18305;Dbxref=NCBI_GP:WJG96354.1;Name=WJG96354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=PUW34_18305;product=Bax inhibitor-1 family protein;protein_id=WJG96354.1;transl_table=11 CP118122.1 Genbank gene 3755767 3757137 . + . ID=gene-PUW34_18310;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=PUW34_18310 CP118122.1 Protein Homology CDS 3755767 3757137 . + 0 ID=cds-WJG96355.1;Parent=gene-PUW34_18310;Dbxref=NCBI_GP:WJG96355.1;Name=WJG96355.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=PUW34_18310;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WJG96355.1;transl_table=11 CP118122.1 Genbank pseudogene 3757326 3759154 . + . ID=gene-PUW34_18315;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=pseudogene;locus_tag=PUW34_18315;pseudo=true CP118122.1 Protein Homology CDS 3757326 3759154 . + 0 ID=cds-PUW34_18315;Parent=gene-PUW34_18315;Note=frameshifted;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=PUW34_18315;product=glutamine--fructose-6-phosphate transaminase (isomerizing);pseudo=true;transl_table=11 CP118122.1 Genbank gene 3759305 3761062 . - . ID=gene-PUW34_18320;Name=PUW34_18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18320 CP118122.1 Protein Homology CDS 3759305 3761062 . - 0 ID=cds-WJG96356.1;Parent=gene-PUW34_18320;Dbxref=NCBI_GP:WJG96356.1;Name=WJG96356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=PUW34_18320;product=SgrR family transcriptional regulator;protein_id=WJG96356.1;transl_table=11 CP118122.1 Genbank gene 3761157 3761975 . + . ID=gene-PUW34_18325;Name=PUW34_18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18325 CP118122.1 Protein Homology CDS 3761157 3761975 . + 0 ID=cds-WJG96357.1;Parent=gene-PUW34_18325;Dbxref=NCBI_GP:WJG96357.1;Name=WJG96357.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=PUW34_18325;product=shikimate 5-dehydrogenase;protein_id=WJG96357.1;transl_table=11 CP118122.1 Genbank gene 3762024 3763397 . + . ID=gene-PUW34_18330;Name=PUW34_18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18330 CP118122.1 Protein Homology CDS 3762024 3763397 . + 0 ID=cds-WJG96358.1;Parent=gene-PUW34_18330;Dbxref=NCBI_GP:WJG96358.1;Name=WJG96358.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=PUW34_18330;product=fructose-specific PTS transporter subunit EIIC;protein_id=WJG96358.1;transl_table=11 CP118122.1 Genbank gene 3763563 3764603 . + . ID=gene-PUW34_18335;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=PUW34_18335 CP118122.1 Protein Homology CDS 3763563 3764603 . + 0 ID=cds-WJG96359.1;Parent=gene-PUW34_18335;Dbxref=NCBI_GP:WJG96359.1;Name=WJG96359.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=PUW34_18335;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WJG96359.1;transl_table=11 CP118122.1 Genbank gene 3764739 3765698 . + . ID=gene-PUW34_18340;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=PUW34_18340 CP118122.1 Protein Homology CDS 3764739 3765698 . + 0 ID=cds-WJG96360.1;Parent=gene-PUW34_18340;Dbxref=NCBI_GP:WJG96360.1;Name=WJG96360.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=PUW34_18340;product=phosphate ABC transporter permease PstC;protein_id=WJG96360.1;transl_table=11 CP118122.1 Genbank pseudogene 3765698 3766587 . + . ID=gene-PUW34_18345;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=pseudogene;locus_tag=PUW34_18345;pseudo=true CP118122.1 Protein Homology CDS 3765698 3766587 . + 0 ID=cds-PUW34_18345;Parent=gene-PUW34_18345;Note=frameshifted;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=PUW34_18345;product=phosphate ABC transporter permease PstA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3766674 3767447 . + . ID=gene-PUW34_18350;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=PUW34_18350 CP118122.1 Protein Homology CDS 3766674 3767447 . + 0 ID=cds-WJG96361.1;Parent=gene-PUW34_18350;Dbxref=NCBI_GP:WJG96361.1;Name=WJG96361.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=PUW34_18350;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WJG96361.1;transl_table=11 CP118122.1 Genbank gene 3767462 3768187 . + . ID=gene-PUW34_18355;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=PUW34_18355 CP118122.1 Protein Homology CDS 3767462 3768187 . + 0 ID=cds-WJG96362.1;Parent=gene-PUW34_18355;Dbxref=NCBI_GP:WJG96362.1;Name=WJG96362.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=PUW34_18355;product=phosphate signaling complex protein PhoU;protein_id=WJG96362.1;transl_table=11 CP118122.1 Genbank gene 3768282 3768947 . - . ID=gene-PUW34_18360;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=PUW34_18360 CP118122.1 Protein Homology CDS 3768282 3768947 . - 0 ID=cds-WJG96363.1;Parent=gene-PUW34_18360;Dbxref=NCBI_GP:WJG96363.1;Name=WJG96363.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=PUW34_18360;product=6-phosphogluconate phosphatase;protein_id=WJG96363.1;transl_table=11 CP118122.1 Genbank gene 3769116 3770453 . + . ID=gene-PUW34_18365;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=PUW34_18365 CP118122.1 Protein Homology CDS 3769116 3770453 . + 0 ID=cds-WJG96364.1;Parent=gene-PUW34_18365;Dbxref=NCBI_GP:WJG96364.1;Name=WJG96364.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=PUW34_18365;product=adenine permease AdeP;protein_id=WJG96364.1;transl_table=11 CP118122.1 Genbank gene 3770498 3771082 . - . ID=gene-PUW34_18370;Name=PUW34_18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18370 CP118122.1 Protein Homology CDS 3770498 3771082 . - 0 ID=cds-WJG96365.1;Parent=gene-PUW34_18370;Dbxref=NCBI_GP:WJG96365.1;Name=WJG96365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=PUW34_18370;product=NAD(P)H-dependent oxidoreductase;protein_id=WJG96365.1;transl_table=11 CP118122.1 Genbank gene 3771082 3771837 . - . ID=gene-PUW34_18375;Name=PUW34_18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18375 CP118122.1 Protein Homology CDS 3771082 3771837 . - 0 ID=cds-WJG96366.1;Parent=gene-PUW34_18375;Dbxref=NCBI_GP:WJG96366.1;Name=WJG96366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=PUW34_18375;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WJG96366.1;transl_table=11 CP118122.1 Genbank gene 3771995 3772933 . - . ID=gene-PUW34_18380;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=PUW34_18380 CP118122.1 Protein Homology CDS 3771995 3772933 . - 0 ID=cds-WJG96367.1;Parent=gene-PUW34_18380;Dbxref=NCBI_GP:WJG96367.1;Name=WJG96367.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=PUW34_18380;product=HTH-type transcriptional regulator YidZ;protein_id=WJG96367.1;transl_table=11 CP118122.1 Genbank gene 3772902 3774026 . - . ID=gene-PUW34_18385;Name=PUW34_18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18385 CP118122.1 Protein Homology CDS 3772902 3774026 . - 0 ID=cds-WJG96368.1;Parent=gene-PUW34_18385;Dbxref=NCBI_GP:WJG96368.1;Name=WJG96368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=PUW34_18385;product=MFS transporter;protein_id=WJG96368.1;transl_table=11 CP118122.1 Genbank gene 3774209 3775573 . - . ID=gene-PUW34_18390;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=PUW34_18390 CP118122.1 Protein Homology CDS 3774209 3775573 . - 0 ID=cds-WJG96369.1;Parent=gene-PUW34_18390;Dbxref=NCBI_GP:WJG96369.1;Name=WJG96369.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=PUW34_18390;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WJG96369.1;transl_table=11 CP118122.1 Genbank gene 3775715 3777361 . - . ID=gene-PUW34_18395;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=PUW34_18395 CP118122.1 Protein Homology CDS 3775715 3777361 . - 0 ID=cds-WJG96370.1;Parent=gene-PUW34_18395;Dbxref=NCBI_GP:WJG96370.1;Name=WJG96370.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=PUW34_18395;product=membrane protein insertase YidC;protein_id=WJG96370.1;transl_table=11 CP118122.1 Genbank gene 3777364 3777621 . - . ID=gene-PUW34_18400;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=PUW34_18400 CP118122.1 Protein Homology CDS 3777364 3777621 . - 0 ID=cds-WJG96371.1;Parent=gene-PUW34_18400;Dbxref=NCBI_GP:WJG96371.1;Name=WJG96371.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=PUW34_18400;product=membrane protein insertion efficiency factor YidD;protein_id=WJG96371.1;transl_table=11 CP118122.1 Genbank pseudogene 3777585 3777943 . - . ID=gene-PUW34_18405;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=pseudogene;locus_tag=PUW34_18405;pseudo=true CP118122.1 Protein Homology CDS 3777585 3777943 . - 0 ID=cds-PUW34_18405;Parent=gene-PUW34_18405;Note=frameshifted;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=PUW34_18405;product=ribonuclease P protein component;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3777960 3778100 . - . ID=gene-PUW34_18410;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=PUW34_18410 CP118122.1 Protein Homology CDS 3777960 3778100 . - 0 ID=cds-WJG96372.1;Parent=gene-PUW34_18410;Dbxref=NCBI_GP:WJG96372.1;Name=WJG96372.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=PUW34_18410;product=50S ribosomal protein L34;protein_id=WJG96372.1;transl_table=11 CP118122.1 Genbank gene 3778761 3780161 . + . ID=gene-PUW34_18415;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=PUW34_18415 CP118122.1 Protein Homology CDS 3778761 3780161 . + 0 ID=cds-WJG96373.1;Parent=gene-PUW34_18415;Dbxref=NCBI_GP:WJG96373.1;Name=WJG96373.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=PUW34_18415;product=chromosomal replication initiator protein DnaA;protein_id=WJG96373.1;transl_table=11 CP118122.1 Genbank gene 3780166 3781266 . + . ID=gene-PUW34_18420;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=PUW34_18420 CP118122.1 Protein Homology CDS 3780166 3781266 . + 0 ID=cds-WJG96374.1;Parent=gene-PUW34_18420;Dbxref=NCBI_GP:WJG96374.1;Name=WJG96374.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=PUW34_18420;product=DNA polymerase III subunit beta;protein_id=WJG96374.1;transl_table=11 CP118122.1 Genbank gene 3781414 3782487 . + . ID=gene-PUW34_18425;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=PUW34_18425 CP118122.1 Protein Homology CDS 3781414 3782487 . + 0 ID=cds-WJG96375.1;Parent=gene-PUW34_18425;Dbxref=NCBI_GP:WJG96375.1;Name=WJG96375.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=PUW34_18425;product=DNA replication/repair protein RecF;protein_id=WJG96375.1;transl_table=11 CP118122.1 Genbank gene 3782516 3784930 . + . ID=gene-PUW34_18430;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=PUW34_18430 CP118122.1 Protein Homology CDS 3782516 3784930 . + 0 ID=cds-WJG96376.1;Parent=gene-PUW34_18430;Dbxref=NCBI_GP:WJG96376.1;Name=WJG96376.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=PUW34_18430;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WJG96376.1;transl_table=11 CP118122.1 Genbank gene 3784949 3785845 . - . ID=gene-PUW34_18435;Name=PUW34_18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18435 CP118122.1 Protein Homology CDS 3784949 3785845 . - 0 ID=cds-WJG96377.1;Parent=gene-PUW34_18435;Dbxref=NCBI_GP:WJG96377.1;Name=WJG96377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=PUW34_18435;product=LysR family transcriptional regulator;protein_id=WJG96377.1;transl_table=11 CP118122.1 Genbank gene 3785960 3787153 . - . ID=gene-PUW34_18440;Name=PUW34_18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18440 CP118122.1 Protein Homology CDS 3785960 3787153 . - 0 ID=cds-WJG96378.1;Parent=gene-PUW34_18440;Dbxref=NCBI_GP:WJG96378.1;Name=WJG96378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=PUW34_18440;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WJG96378.1;transl_table=11 CP118122.1 Genbank pseudogene 3787167 3788429 . - . ID=gene-PUW34_18445;Name=PUW34_18445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18445;pseudo=true CP118122.1 Protein Homology CDS 3787167 3788429 . - 0 ID=cds-PUW34_18445;Parent=gene-PUW34_18445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=PUW34_18445;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3788734 3789579 . + . ID=gene-PUW34_18450;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=PUW34_18450 CP118122.1 Protein Homology CDS 3788734 3789579 . + 0 ID=cds-WJG96379.1;Parent=gene-PUW34_18450;Dbxref=NCBI_GP:WJG96379.1;Name=WJG96379.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=PUW34_18450;product=sugar-phosphatase;protein_id=WJG96379.1;transl_table=11 CP118122.1 Genbank gene 3789840 3790529 . + . ID=gene-PUW34_18455;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=PUW34_18455 CP118122.1 Protein Homology CDS 3789840 3790529 . + 0 ID=cds-WJG96380.1;Parent=gene-PUW34_18455;Dbxref=NCBI_GP:WJG96380.1;Name=WJG96380.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=PUW34_18455;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WJG96380.1;transl_table=11 CP118122.1 Genbank gene 3790526 3791404 . + . ID=gene-PUW34_18460;Name=PUW34_18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18460 CP118122.1 Protein Homology CDS 3790526 3791404 . + 0 ID=cds-WJG96381.1;Parent=gene-PUW34_18460;Dbxref=NCBI_GP:WJG96381.1;Name=WJG96381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=PUW34_18460;product=2-dehydro-3-deoxygalactonokinase;protein_id=WJG96381.1;transl_table=11 CP118122.1 Genbank gene 3791388 3792005 . + . ID=gene-PUW34_18465;Name=PUW34_18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18465 CP118122.1 Protein Homology CDS 3791388 3792005 . + 0 ID=cds-WJG96382.1;Parent=gene-PUW34_18465;Dbxref=NCBI_GP:WJG96382.1;Name=WJG96382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=PUW34_18465;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WJG96382.1;transl_table=11 CP118122.1 Genbank gene 3792002 3793150 . + . ID=gene-PUW34_18470;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=PUW34_18470 CP118122.1 Protein Homology CDS 3792002 3793150 . + 0 ID=cds-WJG96383.1;Parent=gene-PUW34_18470;Dbxref=NCBI_GP:WJG96383.1;Name=WJG96383.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=PUW34_18470;product=galactonate dehydratase;protein_id=WJG96383.1;transl_table=11 CP118122.1 Genbank gene 3793235 3794572 . + . ID=gene-PUW34_18475;Name=PUW34_18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18475 CP118122.1 Protein Homology CDS 3793235 3794572 . + 0 ID=cds-WJG96384.1;Parent=gene-PUW34_18475;Dbxref=NCBI_GP:WJG96384.1;Name=WJG96384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=PUW34_18475;product=MFS transporter;protein_id=WJG96384.1;transl_table=11 CP118122.1 Genbank pseudogene 3794598 3797332 . - . ID=gene-PUW34_18480;Name=torS;gbkey=Gene;gene=torS;gene_biotype=pseudogene;locus_tag=PUW34_18480;pseudo=true CP118122.1 Protein Homology CDS 3794598 3797332 . - 0 ID=cds-PUW34_18480;Parent=gene-PUW34_18480;Note=frameshifted;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=PUW34_18480;product=TMAO reductase system sensor histidine kinase/response regulator TorS;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3797412 3798452 . + . ID=gene-PUW34_18485;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=PUW34_18485 CP118122.1 Protein Homology CDS 3797412 3798452 . + 0 ID=cds-WJG96385.1;Parent=gene-PUW34_18485;Dbxref=NCBI_GP:WJG96385.1;Name=WJG96385.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=PUW34_18485;product=TMAO reductase system periplasmic protein TorT;protein_id=WJG96385.1;transl_table=11 CP118122.1 Genbank gene 3798425 3799117 . - . ID=gene-PUW34_18490;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=PUW34_18490 CP118122.1 Protein Homology CDS 3798425 3799117 . - 0 ID=cds-WJG99037.1;Parent=gene-PUW34_18490;Dbxref=NCBI_GP:WJG99037.1;Name=WJG99037.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=PUW34_18490;product=two-component system response regulator TorR;protein_id=WJG99037.1;transl_table=11 CP118122.1 Genbank gene 3799247 3800431 . + . ID=gene-PUW34_18495;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=PUW34_18495 CP118122.1 Protein Homology CDS 3799247 3800431 . + 0 ID=cds-WJG96386.1;Parent=gene-PUW34_18495;Dbxref=NCBI_GP:WJG96386.1;Name=WJG96386.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=PUW34_18495;product=pentaheme c-type cytochrome TorC;protein_id=WJG96386.1;transl_table=11 CP118122.1 Genbank gene 3800421 3802973 . + . ID=gene-PUW34_18500;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=PUW34_18500 CP118122.1 Protein Homology CDS 3800421 3802973 . + 0 ID=cds-WJG96387.1;Parent=gene-PUW34_18500;Dbxref=NCBI_GP:WJG96387.1;Name=WJG96387.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=PUW34_18500;product=trimethylamine-N-oxide reductase TorA;protein_id=WJG96387.1;transl_table=11 CP118122.1 Genbank gene 3802966 3803598 . + . ID=gene-PUW34_18505;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=PUW34_18505 CP118122.1 Protein Homology CDS 3802966 3803598 . + 0 ID=cds-WJG96388.1;Parent=gene-PUW34_18505;Dbxref=NCBI_GP:WJG96388.1;Name=WJG96388.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=PUW34_18505;product=molecular chaperone TorD;protein_id=WJG96388.1;transl_table=11 CP118122.1 Genbank gene 3803796 3805187 . + . ID=gene-PUW34_18510;Name=PUW34_18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18510 CP118122.1 Protein Homology CDS 3803796 3805187 . + 0 ID=cds-WJG99038.1;Parent=gene-PUW34_18510;Dbxref=NCBI_GP:WJG99038.1;Name=WJG99038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=PUW34_18510;product=cytochrome-c peroxidase;protein_id=WJG99038.1;transl_table=11 CP118122.1 Genbank gene 3805193 3805810 . + . ID=gene-PUW34_18515;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PUW34_18515 CP118122.1 Protein Homology CDS 3805193 3805810 . + 0 ID=cds-WJG99039.1;Parent=gene-PUW34_18515;Dbxref=NCBI_GP:WJG99039.1;Name=WJG99039.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=PUW34_18515;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WJG99039.1;transl_table=11 CP118122.1 Genbank gene 3805807 3806466 . + . ID=gene-PUW34_18520;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PUW34_18520 CP118122.1 Protein Homology CDS 3805807 3806466 . + 0 ID=cds-WJG96389.1;Parent=gene-PUW34_18520;Dbxref=NCBI_GP:WJG96389.1;Name=WJG96389.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=PUW34_18520;product=heme exporter protein CcmB;protein_id=WJG96389.1;transl_table=11 CP118122.1 Genbank gene 3806518 3807255 . + . ID=gene-PUW34_18525;Name=PUW34_18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18525 CP118122.1 Protein Homology CDS 3806518 3807255 . + 0 ID=cds-WJG99040.1;Parent=gene-PUW34_18525;Dbxref=NCBI_GP:WJG99040.1;Name=WJG99040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=PUW34_18525;product=heme ABC transporter permease;protein_id=WJG99040.1;transl_table=11 CP118122.1 Genbank gene 3807252 3807464 . + . ID=gene-PUW34_18530;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PUW34_18530 CP118122.1 Protein Homology CDS 3807252 3807464 . + 0 ID=cds-WJG96390.1;Parent=gene-PUW34_18530;Dbxref=NCBI_GP:WJG96390.1;Name=WJG96390.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=PUW34_18530;product=heme exporter protein CcmD;protein_id=WJG96390.1;transl_table=11 CP118122.1 Genbank gene 3807461 3807940 . + . ID=gene-PUW34_18535;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PUW34_18535 CP118122.1 Protein Homology CDS 3807461 3807940 . + 0 ID=cds-WJG96391.1;Parent=gene-PUW34_18535;Dbxref=NCBI_GP:WJG96391.1;Name=WJG96391.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=PUW34_18535;product=cytochrome c maturation protein CcmE;protein_id=WJG96391.1;transl_table=11 CP118122.1 Genbank gene 3807937 3809868 . + . ID=gene-PUW34_18540;Name=PUW34_18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18540 CP118122.1 Protein Homology CDS 3807937 3809868 . + 0 ID=cds-WJG96392.1;Parent=gene-PUW34_18540;Dbxref=NCBI_GP:WJG96392.1;Name=WJG96392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=PUW34_18540;product=heme lyase CcmF/NrfE family subunit;protein_id=WJG96392.1;transl_table=11 CP118122.1 Genbank gene 3809865 3810422 . + . ID=gene-PUW34_18545;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PUW34_18545 CP118122.1 Protein Homology CDS 3809865 3810422 . + 0 ID=cds-WJG96393.1;Parent=gene-PUW34_18545;Dbxref=NCBI_GP:WJG96393.1;Name=WJG96393.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=PUW34_18545;product=thiol:disulfide interchange protein DsbE;protein_id=WJG96393.1;transl_table=11 CP118122.1 Genbank gene 3810419 3811471 . + . ID=gene-PUW34_18550;Name=PUW34_18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18550 CP118122.1 Protein Homology CDS 3810419 3811471 . + 0 ID=cds-WJG96394.1;Parent=gene-PUW34_18550;Dbxref=NCBI_GP:WJG96394.1;Name=WJG96394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=PUW34_18550;product=cytochrome c-type biogenesis protein CcmH;protein_id=WJG96394.1;transl_table=11 CP118122.1 Genbank gene 3811593 3812819 . + . ID=gene-PUW34_18555;Name=PUW34_18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18555 CP118122.1 Protein Homology CDS 3811593 3812819 . + 0 ID=cds-WJG96395.1;Parent=gene-PUW34_18555;Dbxref=NCBI_GP:WJG96395.1;Name=WJG96395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=PUW34_18555;product=DUF3748 domain-containing protein;protein_id=WJG96395.1;transl_table=11 CP118122.1 Genbank gene 3812821 3813153 . - . ID=gene-PUW34_18560;Name=PUW34_18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18560 CP118122.1 Protein Homology CDS 3812821 3813153 . - 0 ID=cds-WJG99041.1;Parent=gene-PUW34_18560;Dbxref=NCBI_GP:WJG99041.1;Name=WJG99041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=PUW34_18560;product=YceK/YidQ family lipoprotein;protein_id=WJG99041.1;transl_table=11 CP118122.1 cmsearch sequence_feature 3813396 3813469 . + . ID=id-CP118122.1:3813396..3813469;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118122.1 Genbank gene 3813463 3813876 . + . ID=gene-PUW34_18565;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=PUW34_18565 CP118122.1 Protein Homology CDS 3813463 3813876 . + 0 ID=cds-WJG96396.1;Parent=gene-PUW34_18565;Dbxref=NCBI_GP:WJG96396.1;Name=WJG96396.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=PUW34_18565;product=heat shock chaperone IbpA;protein_id=WJG96396.1;transl_table=11 CP118122.1 Genbank gene 3813986 3814414 . + . ID=gene-PUW34_18570;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=PUW34_18570 CP118122.1 Protein Homology CDS 3813986 3814414 . + 0 ID=cds-WJG96397.1;Parent=gene-PUW34_18570;Dbxref=NCBI_GP:WJG96397.1;Name=WJG96397.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=PUW34_18570;product=heat shock chaperone IbpB;protein_id=WJG96397.1;transl_table=11 CP118122.1 Genbank gene 3814602 3816578 . + . ID=gene-PUW34_18575;Name=PUW34_18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18575 CP118122.1 Protein Homology CDS 3814602 3816578 . + 0 ID=cds-WJG96398.1;Parent=gene-PUW34_18575;Dbxref=NCBI_GP:WJG96398.1;Name=WJG96398.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF003007.0;locus_tag=PUW34_18575;product=putative transporter;protein_id=WJG96398.1;transl_table=11 CP118122.1 Genbank gene 3816698 3817045 . + . ID=gene-PUW34_18580;Name=PUW34_18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18580 CP118122.1 Protein Homology CDS 3816698 3817045 . + 0 ID=cds-WJG96399.1;Parent=gene-PUW34_18580;Dbxref=NCBI_GP:WJG96399.1;Name=WJG96399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=PUW34_18580;product=YidH family protein;protein_id=WJG96399.1;transl_table=11 CP118122.1 Genbank gene 3817035 3817397 . + . ID=gene-PUW34_18585;Name=PUW34_18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18585 CP118122.1 Protein Homology CDS 3817035 3817397 . + 0 ID=cds-WJG96400.1;Parent=gene-PUW34_18585;Dbxref=NCBI_GP:WJG96400.1;Name=WJG96400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=PUW34_18585;product=DUF202 domain-containing protein;protein_id=WJG96400.1;transl_table=11 CP118122.1 Genbank gene 3817394 3817924 . + . ID=gene-PUW34_18590;Name=PUW34_18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18590 CP118122.1 Protein Homology CDS 3817394 3817924 . + 0 ID=cds-WJG96401.1;Parent=gene-PUW34_18590;Dbxref=NCBI_GP:WJG96401.1;Name=WJG96401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=PUW34_18590;product=radical SAM protein;protein_id=WJG96401.1;transl_table=11 CP118122.1 Genbank gene 3818006 3819328 . - . ID=gene-PUW34_18595;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=PUW34_18595 CP118122.1 Protein Homology CDS 3818006 3819328 . - 0 ID=cds-WJG96402.1;Parent=gene-PUW34_18595;Dbxref=NCBI_GP:WJG96402.1;Name=WJG96402.1;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=PUW34_18595;product=D-serine ammonia-lyase;protein_id=WJG96402.1;transl_table=11 CP118122.1 Genbank gene 3819346 3820683 . - . ID=gene-PUW34_18600;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=PUW34_18600 CP118122.1 Protein Homology CDS 3819346 3820683 . - 0 ID=cds-WJG96403.1;Parent=gene-PUW34_18600;Dbxref=NCBI_GP:WJG96403.1;Name=WJG96403.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=PUW34_18600;product=D-serine transporter DsdX;protein_id=WJG96403.1;transl_table=11 CP118122.1 Genbank gene 3820909 3821832 . + . ID=gene-PUW34_18605;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=PUW34_18605 CP118122.1 Protein Homology CDS 3820909 3821832 . + 0 ID=cds-WJG99042.1;Parent=gene-PUW34_18605;Dbxref=NCBI_GP:WJG99042.1;Name=WJG99042.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=PUW34_18605;product=DNA-binding transcriptional regulator DsdC;protein_id=WJG99042.1;transl_table=11 CP118122.1 Genbank pseudogene 3821896 3822980 . + . ID=gene-PUW34_18610;Name=PUW34_18610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18610;pseudo=true CP118122.1 Protein Homology CDS 3821896 3822980 . + 0 ID=cds-PUW34_18610;Parent=gene-PUW34_18610;Note=frameshifted;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=PUW34_18610;product=cellulase family glycosylhydrolase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3822907 3824091 . - . ID=gene-PUW34_18615;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=PUW34_18615 CP118122.1 Protein Homology CDS 3822907 3824091 . - 0 ID=cds-WJG96404.1;Parent=gene-PUW34_18615;Dbxref=NCBI_GP:WJG96404.1;Name=WJG96404.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=PUW34_18615;product=multidrug efflux MFS transporter EmrD;protein_id=WJG96404.1;transl_table=11 CP118122.1 Genbank gene 3824294 3825154 . - . ID=gene-PUW34_18620;Name=PUW34_18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18620 CP118122.1 Protein Homology CDS 3824294 3825154 . - 0 ID=cds-WJG96405.1;Parent=gene-PUW34_18620;Dbxref=NCBI_GP:WJG96405.1;Name=WJG96405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=PUW34_18620;product=DMT family transporter;protein_id=WJG96405.1;transl_table=11 CP118122.1 Genbank gene 3825247 3825336 . - . ID=gene-PUW34_18625;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=PUW34_18625 CP118122.1 Protein Homology CDS 3825247 3825336 . - 0 ID=cds-WJG96406.1;Parent=gene-PUW34_18625;Dbxref=NCBI_GP:WJG96406.1;Name=WJG96406.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=PUW34_18625;product=type I toxin-antitoxin system toxin TisB;protein_id=WJG96406.1;transl_table=11 CP118122.1 Genbank pseudogene 3825333 3825447 . - . ID=gene-PUW34_18630;Name=PUW34_18630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18630;pseudo=true CP118122.1 Protein Homology CDS 3825333 3825447 . - 0 ID=cds-PUW34_18630;Parent=gene-PUW34_18630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=PUW34_18630;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3825970 3826068 . + . ID=gene-PUW34_18635;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=PUW34_18635 CP118122.1 Protein Homology CDS 3825970 3826068 . + 0 ID=cds-WJG96407.1;Parent=gene-PUW34_18635;Dbxref=NCBI_GP:WJG96407.1;Name=WJG96407.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=PUW34_18635;product=ilvB operon leader peptide IvbL;protein_id=WJG96407.1;transl_table=11 CP118122.1 Genbank pseudogene 3826175 3827862 . + . ID=gene-PUW34_18640;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=pseudogene;locus_tag=PUW34_18640;pseudo=true CP118122.1 Protein Homology CDS 3826175 3827862 . + 0 ID=cds-PUW34_18640;Parent=gene-PUW34_18640;Note=frameshifted;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=PUW34_18640;product=acetolactate synthase large subunit;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3827866 3828156 . + . ID=gene-PUW34_18645;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PUW34_18645 CP118122.1 Protein Homology CDS 3827866 3828156 . + 0 ID=cds-WJG96408.1;Parent=gene-PUW34_18645;Dbxref=NCBI_GP:WJG96408.1;Name=WJG96408.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=PUW34_18645;product=acetolactate synthase small subunit;protein_id=WJG96408.1;transl_table=11 CP118122.1 Genbank gene 3828158 3828943 . - . ID=gene-PUW34_18650;Name=PUW34_18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18650 CP118122.1 Protein Homology CDS 3828158 3828943 . - 0 ID=cds-WJG96409.1;Parent=gene-PUW34_18650;Dbxref=NCBI_GP:WJG96409.1;Name=WJG96409.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=PUW34_18650;product=DeoR family transcriptional regulator;protein_id=WJG96409.1;transl_table=11 CP118122.1 Genbank gene 3829268 3830188 . + . ID=gene-PUW34_18655;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=PUW34_18655 CP118122.1 Protein Homology CDS 3829268 3830188 . + 0 ID=cds-WJG96410.1;Parent=gene-PUW34_18655;Dbxref=NCBI_GP:WJG96410.1;Name=WJG96410.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=PUW34_18655;product=ribokinase;protein_id=WJG96410.1;transl_table=11 CP118122.1 Genbank gene 3830219 3831535 . + . ID=gene-PUW34_18660;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PUW34_18660 CP118122.1 Protein Homology CDS 3830219 3831535 . + 0 ID=cds-WJG96411.1;Parent=gene-PUW34_18660;Dbxref=NCBI_GP:WJG96411.1;Name=WJG96411.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=PUW34_18660;product=L-fucose:H+ symporter permease;protein_id=WJG96411.1;transl_table=11 CP118122.1 Genbank gene 3831547 3832560 . + . ID=gene-PUW34_18665;Name=PUW34_18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18665 CP118122.1 Protein Homology CDS 3831547 3832560 . + 0 ID=cds-WJG96412.1;Parent=gene-PUW34_18665;Dbxref=NCBI_GP:WJG96412.1;Name=WJG96412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=PUW34_18665;product=aldose 1-epimerase family protein;protein_id=WJG96412.1;transl_table=11 CP118122.1 Genbank gene 3832714 3833304 . + . ID=gene-PUW34_18670;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=PUW34_18670 CP118122.1 Protein Homology CDS 3832714 3833304 . + 0 ID=cds-WJG96413.1;Parent=gene-PUW34_18670;Dbxref=NCBI_GP:WJG96413.1;Name=WJG96413.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=PUW34_18670;product=transcriptional regulator UhpA;protein_id=WJG96413.1;transl_table=11 CP118122.1 Genbank gene 3833304 3834806 . + . ID=gene-PUW34_18675;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=PUW34_18675 CP118122.1 Protein Homology CDS 3833304 3834806 . + 0 ID=cds-WJG96414.1;Parent=gene-PUW34_18675;Dbxref=NCBI_GP:WJG96414.1;Name=WJG96414.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=PUW34_18675;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WJG96414.1;transl_table=11 CP118122.1 Genbank gene 3834816 3836144 . + . ID=gene-PUW34_18680;Name=PUW34_18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18680 CP118122.1 Protein Homology CDS 3834816 3836144 . + 0 ID=cds-WJG96415.1;Parent=gene-PUW34_18680;Dbxref=NCBI_GP:WJG96415.1;Name=WJG96415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=PUW34_18680;product=MFS transporter;protein_id=WJG96415.1;transl_table=11 CP118122.1 Genbank gene 3836287 3837666 . + . ID=gene-PUW34_18685;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=PUW34_18685 CP118122.1 Protein Homology CDS 3836287 3837666 . + 0 ID=cds-WJG96416.1;Parent=gene-PUW34_18685;Dbxref=NCBI_GP:WJG96416.1;Name=WJG96416.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=PUW34_18685;product=hexose-6-phosphate:phosphate antiporter;protein_id=WJG96416.1;transl_table=11 CP118122.1 Genbank gene 3837859 3838311 . + . ID=gene-PUW34_18690;Name=PUW34_18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18690 CP118122.1 Protein Homology CDS 3837859 3838311 . + 0 ID=cds-WJG96417.1;Parent=gene-PUW34_18690;Dbxref=NCBI_GP:WJG96417.1;Name=WJG96417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=PUW34_18690;product=DUF1198 domain-containing protein;protein_id=WJG96417.1;transl_table=11 CP118122.1 Genbank gene 3838744 3839067 . - . ID=gene-PUW34_18695;Name=PUW34_18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18695 CP118122.1 Protein Homology CDS 3838744 3839067 . - 0 ID=cds-WJG96418.1;Parent=gene-PUW34_18695;Dbxref=NCBI_GP:WJG96418.1;Name=WJG96418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=PUW34_18695;product=DNA-binding transcriptional regulator;protein_id=WJG96418.1;transl_table=11 CP118122.1 Genbank gene 3839051 3839410 . - . ID=gene-PUW34_18700;Name=PUW34_18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18700 CP118122.1 Protein Homology CDS 3839051 3839410 . - 0 ID=cds-WJG96419.1;Parent=gene-PUW34_18700;Dbxref=NCBI_GP:WJG96419.1;Name=WJG96419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=PUW34_18700;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG96419.1;transl_table=11 CP118122.1 Genbank gene 3839626 3840819 . + . ID=gene-PUW34_18705;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=PUW34_18705 CP118122.1 Protein Homology CDS 3839626 3840819 . + 0 ID=cds-WJG96420.1;Parent=gene-PUW34_18705;Dbxref=NCBI_GP:WJG96420.1;Name=WJG96420.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=PUW34_18705;product=purine ribonucleoside efflux pump NepI;protein_id=WJG96420.1;transl_table=11 CP118122.1 Genbank gene 3840879 3842261 . - . ID=gene-PUW34_18710;Name=PUW34_18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18710 CP118122.1 Protein Homology CDS 3840879 3842261 . - 0 ID=cds-WJG96421.1;Parent=gene-PUW34_18710;Dbxref=NCBI_GP:WJG96421.1;Name=WJG96421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=PUW34_18710;product=glycoside hydrolase family 1 protein;protein_id=WJG96421.1;transl_table=11 CP118122.1 Genbank gene 3842367 3842660 . - . ID=gene-PUW34_18715;Name=PUW34_18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18715 CP118122.1 Protein Homology CDS 3842367 3842660 . - 0 ID=cds-WJG96422.1;Parent=gene-PUW34_18715;Dbxref=NCBI_GP:WJG96422.1;Name=WJG96422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=PUW34_18715;product=hypothetical protein;protein_id=WJG96422.1;transl_table=11 CP118122.1 Genbank pseudogene 3842857 3845654 . + . ID=gene-PUW34_18720;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=pseudogene;locus_tag=PUW34_18720;pseudo=true CP118122.1 Protein Homology CDS 3842857 3845654 . + 0 ID=cds-PUW34_18720;Parent=gene-PUW34_18720;Note=frameshifted;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=PUW34_18720;product=transcriptional regulator DagR;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3845873 3846298 . + . ID=gene-PUW34_18725;Name=PUW34_18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18725 CP118122.1 Protein Homology CDS 3845873 3846298 . + 0 ID=cds-WJG96423.1;Parent=gene-PUW34_18725;Dbxref=NCBI_GP:WJG96423.1;Name=WJG96423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=PUW34_18725;product=PTS sugar transporter subunit IIA;protein_id=WJG96423.1;transl_table=11 CP118122.1 Genbank gene 3846309 3846794 . + . ID=gene-PUW34_18730;Name=PUW34_18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18730 CP118122.1 Protein Homology CDS 3846309 3846794 . + 0 ID=cds-WJG96424.1;Parent=gene-PUW34_18730;Dbxref=NCBI_GP:WJG96424.1;Name=WJG96424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=PUW34_18730;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WJG96424.1;transl_table=11 CP118122.1 Genbank gene 3846940 3847689 . + . ID=gene-PUW34_18735;Name=PUW34_18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18735 CP118122.1 Protein Homology CDS 3846940 3847689 . + 0 ID=cds-WJG96425.1;Parent=gene-PUW34_18735;Dbxref=NCBI_GP:WJG96425.1;Name=WJG96425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=PUW34_18735;product=PTS sugar transporter subunit IIC;protein_id=WJG96425.1;transl_table=11 CP118122.1 Genbank gene 3847686 3848546 . + . ID=gene-PUW34_18740;Name=PUW34_18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18740 CP118122.1 Protein Homology CDS 3847686 3848546 . + 0 ID=cds-WJG96426.1;Parent=gene-PUW34_18740;Dbxref=NCBI_GP:WJG96426.1;Name=WJG96426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=PUW34_18740;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WJG96426.1;transl_table=11 CP118122.1 Genbank gene 3848550 3849659 . + . ID=gene-PUW34_18745;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=PUW34_18745 CP118122.1 Protein Homology CDS 3848550 3849659 . + 0 ID=cds-WJG96427.1;Parent=gene-PUW34_18745;Dbxref=NCBI_GP:WJG96427.1;Name=WJG96427.1;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=PUW34_18745;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WJG96427.1;transl_table=11 CP118122.1 Genbank gene 3849646 3850389 . + . ID=gene-PUW34_18750;Name=PUW34_18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18750 CP118122.1 Protein Homology CDS 3849646 3850389 . + 0 ID=cds-WJG96428.1;Parent=gene-PUW34_18750;Dbxref=NCBI_GP:WJG96428.1;Name=WJG96428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=PUW34_18750;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WJG96428.1;transl_table=11 CP118122.1 Genbank gene 3850625 3851566 . + . ID=gene-PUW34_18755;Name=PUW34_18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18755 CP118122.1 Protein Homology CDS 3850625 3851566 . + 0 ID=cds-WJG96429.1;Parent=gene-PUW34_18755;Dbxref=NCBI_GP:WJG96429.1;Name=WJG96429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=PUW34_18755;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG96429.1;transl_table=11 CP118122.1 Genbank pseudogene 3851609 3852503 . - . ID=gene-PUW34_18760;Name=PUW34_18760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18760;pseudo=true CP118122.1 Protein Homology CDS 3851609 3852503 . - 0 ID=cds-PUW34_18760;Parent=gene-PUW34_18760;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=PUW34_18760;product=EamA family transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3853015 3853710 . + . ID=gene-PUW34_18765;Name=PUW34_18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18765 CP118122.1 Protein Homology CDS 3853015 3853710 . + 0 ID=cds-WJG96430.1;Parent=gene-PUW34_18765;Dbxref=NCBI_GP:WJG96430.1;Name=WJG96430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=PUW34_18765;product=MgtC family protein;protein_id=WJG96430.1;transl_table=11 CP118122.1 Genbank gene 3853930 3856656 . + . ID=gene-PUW34_18770;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PUW34_18770 CP118122.1 Protein Homology CDS 3853930 3856656 . + 0 ID=cds-WJG96431.1;Parent=gene-PUW34_18770;Dbxref=NCBI_GP:WJG96431.1;Name=WJG96431.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=PUW34_18770;product=magnesium-translocating P-type ATPase;protein_id=WJG96431.1;transl_table=11 CP118122.1 Genbank gene 3856678 3856770 . + . ID=gene-PUW34_18775;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=PUW34_18775 CP118122.1 Protein Homology CDS 3856678 3856770 . + 0 ID=cds-WJG96432.1;Parent=gene-PUW34_18775;Dbxref=NCBI_GP:WJG96432.1;Name=WJG96432.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=PUW34_18775;product=protein MgtR;protein_id=WJG96432.1;transl_table=11 CP118122.1 Genbank gene 3856783 3856869 . + . ID=gene-PUW34_18780;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=PUW34_18780 CP118122.1 Protein Homology CDS 3856783 3856869 . + 0 ID=cds-WJG99043.1;Parent=gene-PUW34_18780;Dbxref=NCBI_GP:WJG99043.1;Name=WJG99043.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=PUW34_18780;product=magnesium transporter protection protein MgtU;protein_id=WJG99043.1;transl_table=11 CP118122.1 Genbank pseudogene 3856971 3857406 . + . ID=gene-PUW34_18785;Name=PUW34_18785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18785;pseudo=true CP118122.1 Protein Homology CDS 3856971 3857406 . + 0 ID=cds-PUW34_18785;Parent=gene-PUW34_18785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210795.1;locus_tag=PUW34_18785;product=anti-virulence regulator CigR family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3857574 3858254 . - . ID=gene-PUW34_18790;Name=PUW34_18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18790 CP118122.1 Protein Homology CDS 3857574 3858254 . - 0 ID=cds-WJG96433.1;Parent=gene-PUW34_18790;Dbxref=NCBI_GP:WJG96433.1;Name=WJG96433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=PUW34_18790;product=isochorismatase family protein;protein_id=WJG96433.1;transl_table=11 CP118122.1 Genbank pseudogene 3859038 3859894 . + . ID=gene-PUW34_18795;Name=PUW34_18795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18795;pseudo=true CP118122.1 Protein Homology CDS 3859038 3859894 . + 0 ID=cds-PUW34_18795;Parent=gene-PUW34_18795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=PUW34_18795;product=transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3859905 3860369 . + . ID=gene-PUW34_18800;Name=PUW34_18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18800 CP118122.1 Protein Homology CDS 3859905 3860369 . + 0 ID=cds-WJG99044.1;Parent=gene-PUW34_18800;Dbxref=NCBI_GP:WJG99044.1;Name=WJG99044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=PUW34_18800;product=hypothetical protein;protein_id=WJG99044.1;transl_table=11 CP118122.1 Genbank gene 3860464 3863331 . - . ID=gene-PUW34_18805;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=PUW34_18805 CP118122.1 Protein Homology CDS 3860464 3863331 . - 0 ID=cds-WJG96434.1;Parent=gene-PUW34_18805;Dbxref=NCBI_GP:WJG96434.1;Name=WJG96434.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=PUW34_18805;product=intestinal colonization autotransporter adhesin MisL;protein_id=WJG96434.1;transl_table=11 CP118122.1 Genbank gene 3863406 3864023 . - . ID=gene-PUW34_18810;Name=PUW34_18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18810 CP118122.1 Protein Homology CDS 3863406 3864023 . - 0 ID=cds-WJG96435.1;Parent=gene-PUW34_18810;Dbxref=NCBI_GP:WJG96435.1;Name=WJG96435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=PUW34_18810;product=helix-turn-helix transcriptional regulator;protein_id=WJG96435.1;transl_table=11 CP118122.1 Genbank pseudogene 3865037 3865168 . + . ID=gene-PUW34_18815;Name=PUW34_18815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18815;pseudo=true CP118122.1 Protein Homology CDS 3865037 3865168 . + 0 ID=cds-PUW34_18815;Parent=gene-PUW34_18815;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=PUW34_18815;product=transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3865322 3866359 . - . ID=gene-PUW34_18820;Name=PUW34_18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18820 CP118122.1 Protein Homology CDS 3865322 3866359 . - 0 ID=cds-WJG96436.1;Parent=gene-PUW34_18820;Dbxref=NCBI_GP:WJG96436.1;Name=WJG96436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=PUW34_18820;product=virulence RhuM family protein;protein_id=WJG96436.1;transl_table=11 CP118122.1 Genbank pseudogene 3866447 3866863 . - . ID=gene-PUW34_18825;Name=PUW34_18825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18825;pseudo=true CP118122.1 Protein Homology CDS 3866447 3866863 . - 0 ID=cds-PUW34_18825;Parent=gene-PUW34_18825;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=PUW34_18825;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 3866893 3868078 . - . ID=gene-PUW34_18830;Name=PUW34_18830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18830;pseudo=true CP118122.1 Protein Homology CDS 3866893 3868078 . - 0 ID=cds-PUW34_18830;Parent=gene-PUW34_18830;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462652.1;locus_tag=PUW34_18830;product=AAA family ATPase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3868195 3868323 . - . ID=gene-PUW34_18835;Name=PUW34_18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18835 CP118122.1 Protein Homology CDS 3868195 3868323 . - 0 ID=cds-WJG99045.1;Parent=gene-PUW34_18835;Dbxref=NCBI_GP:WJG99045.1;Name=WJG99045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018465.2;locus_tag=PUW34_18835;product=toxin;protein_id=WJG99045.1;transl_table=11 CP118122.1 Genbank gene 3868768 3869112 . + . ID=gene-PUW34_18840;Name=PUW34_18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18840 CP118122.1 Protein Homology CDS 3868768 3869112 . + 0 ID=cds-WJG96437.1;Parent=gene-PUW34_18840;Dbxref=NCBI_GP:WJG96437.1;Name=WJG96437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=PUW34_18840;product=hypothetical protein;protein_id=WJG96437.1;transl_table=11 CP118122.1 Genbank gene 3869429 3869523 . - . ID=gene-PUW34_18845;Name=PUW34_18845;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_18845 CP118122.1 tRNAscan-SE tRNA 3869429 3869523 . - . ID=rna-PUW34_18845;Parent=gene-PUW34_18845;anticodon=(pos:complement(3869487..3869489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18845;product=tRNA-Sec CP118122.1 tRNAscan-SE exon 3869429 3869523 . - . ID=exon-PUW34_18845-1;Parent=rna-PUW34_18845;anticodon=(pos:complement(3869487..3869489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_18845;product=tRNA-Sec CP118122.1 Genbank pseudogene 3869811 3871192 . + . ID=gene-PUW34_18850;Name=PUW34_18850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_18850;pseudo=true CP118122.1 Protein Homology CDS 3869811 3871192 . + 0 ID=cds-PUW34_18850;Parent=gene-PUW34_18850;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=PUW34_18850;product=glycoside-pentoside-hexuronide family transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3871204 3873522 . + . ID=gene-PUW34_18855;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=PUW34_18855 CP118122.1 Protein Homology CDS 3871204 3873522 . + 0 ID=cds-WJG96438.1;Parent=gene-PUW34_18855;Dbxref=NCBI_GP:WJG96438.1;Name=WJG96438.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=PUW34_18855;product=alpha-xylosidase;protein_id=WJG96438.1;transl_table=11 CP118122.1 Genbank gene 3873625 3875334 . - . ID=gene-PUW34_18860;Name=PUW34_18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18860 CP118122.1 Protein Homology CDS 3873625 3875334 . - 0 ID=cds-WJG96439.1;Parent=gene-PUW34_18860;Dbxref=NCBI_GP:WJG96439.1;Name=WJG96439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=PUW34_18860;product=AsmA family protein;protein_id=WJG96439.1;transl_table=11 CP118122.1 Genbank gene 3875455 3876846 . - . ID=gene-PUW34_18865;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=PUW34_18865 CP118122.1 Protein Homology CDS 3875455 3876846 . - 0 ID=cds-WJG96440.1;Parent=gene-PUW34_18865;Dbxref=NCBI_GP:WJG96440.1;Name=WJG96440.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=PUW34_18865;product=xanthine/proton symporter XanP;protein_id=WJG96440.1;transl_table=11 CP118122.1 Genbank gene 3877074 3878279 . + . ID=gene-PUW34_18870;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=PUW34_18870 CP118122.1 Protein Homology CDS 3877074 3878279 . + 0 ID=cds-WJG96441.1;Parent=gene-PUW34_18870;Dbxref=NCBI_GP:WJG96441.1;Name=WJG96441.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=PUW34_18870;product=sodium/glutamate symporter;protein_id=WJG96441.1;transl_table=11 CP118122.1 Genbank gene 3878315 3880396 . - . ID=gene-PUW34_18875;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=PUW34_18875 CP118122.1 Protein Homology CDS 3878315 3880396 . - 0 ID=cds-WJG96442.1;Parent=gene-PUW34_18875;Dbxref=NCBI_GP:WJG96442.1;Name=WJG96442.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=PUW34_18875;product=ATP-dependent DNA helicase RecG;protein_id=WJG96442.1;transl_table=11 CP118122.1 Genbank gene 3880402 3881091 . - . ID=gene-PUW34_18880;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=PUW34_18880 CP118122.1 Protein Homology CDS 3880402 3881091 . - 0 ID=cds-WJG96443.1;Parent=gene-PUW34_18880;Dbxref=NCBI_GP:WJG96443.1;Name=WJG96443.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=PUW34_18880;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WJG96443.1;transl_table=11 CP118122.1 Genbank gene 3881096 3883207 . - . ID=gene-PUW34_18885;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=PUW34_18885 CP118122.1 Protein Homology CDS 3881096 3883207 . - 0 ID=cds-WJG96444.1;Parent=gene-PUW34_18885;Dbxref=NCBI_GP:WJG96444.1;Name=WJG96444.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=PUW34_18885;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WJG96444.1;transl_table=11 CP118122.1 Genbank gene 3883226 3883501 . - . ID=gene-PUW34_18890;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=PUW34_18890 CP118122.1 Protein Homology CDS 3883226 3883501 . - 0 ID=cds-WJG96445.1;Parent=gene-PUW34_18890;Dbxref=NCBI_GP:WJG96445.1;Name=WJG96445.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=PUW34_18890;product=DNA-directed RNA polymerase subunit omega;protein_id=WJG96445.1;transl_table=11 CP118122.1 Genbank pseudogene 3883556 3884178 . - . ID=gene-PUW34_18895;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=pseudogene;locus_tag=PUW34_18895;pseudo=true CP118122.1 Protein Homology CDS 3883556 3884178 . - 0 ID=cds-PUW34_18895;Parent=gene-PUW34_18895;Note=frameshifted;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=PUW34_18895;product=guanylate kinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3884435 3886120 . + . ID=gene-PUW34_18900;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=PUW34_18900 CP118122.1 Protein Homology CDS 3884435 3886120 . + 0 ID=cds-WJG96446.1;Parent=gene-PUW34_18900;Dbxref=NCBI_GP:WJG96446.1;Name=WJG96446.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=PUW34_18900;product=NAD-dependent DNA ligase LigB;protein_id=WJG96446.1;transl_table=11 CP118122.1 Genbank gene 3886117 3886734 . - . ID=gene-PUW34_18905;Name=PUW34_18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18905 CP118122.1 Protein Homology CDS 3886117 3886734 . - 0 ID=cds-WJG96447.1;Parent=gene-PUW34_18905;Dbxref=NCBI_GP:WJG96447.1;Name=WJG96447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=PUW34_18905;product=trimeric intracellular cation channel family protein;protein_id=WJG96447.1;transl_table=11 CP118122.1 Genbank gene 3886984 3887865 . - . ID=gene-PUW34_18910;Name=PUW34_18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18910 CP118122.1 Protein Homology CDS 3886984 3887865 . - 0 ID=cds-WJG96448.1;Parent=gene-PUW34_18910;Dbxref=NCBI_GP:WJG96448.1;Name=WJG96448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=PUW34_18910;product=HARLDQ motif MBL-fold protein;protein_id=WJG96448.1;transl_table=11 CP118122.1 Genbank gene 3887939 3888841 . + . ID=gene-PUW34_18915;Name=PUW34_18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18915 CP118122.1 Protein Homology CDS 3887939 3888841 . + 0 ID=cds-WJG96449.1;Parent=gene-PUW34_18915;Dbxref=NCBI_GP:WJG96449.1;Name=WJG96449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=PUW34_18915;product=LysR family transcriptional regulator;protein_id=WJG96449.1;transl_table=11 CP118122.1 Genbank gene 3888891 3889754 . - . ID=gene-PUW34_18920;Name=PUW34_18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18920 CP118122.1 Protein Homology CDS 3888891 3889754 . - 0 ID=cds-WJG96450.1;Parent=gene-PUW34_18920;Dbxref=NCBI_GP:WJG96450.1;Name=WJG96450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=PUW34_18920;product=YicC family protein;protein_id=WJG96450.1;transl_table=11 CP118122.1 Genbank gene 3889880 3890596 . + . ID=gene-PUW34_18925;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=PUW34_18925 CP118122.1 Protein Homology CDS 3889880 3890596 . + 0 ID=cds-WJG96451.1;Parent=gene-PUW34_18925;Dbxref=NCBI_GP:WJG96451.1;Name=WJG96451.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=PUW34_18925;product=ribonuclease PH;protein_id=WJG96451.1;transl_table=11 CP118122.1 Genbank gene 3890675 3891316 . + . ID=gene-PUW34_18930;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=PUW34_18930 CP118122.1 Protein Homology CDS 3890675 3891316 . + 0 ID=cds-WJG96452.1;Parent=gene-PUW34_18930;Dbxref=NCBI_GP:WJG96452.1;Name=WJG96452.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=PUW34_18930;product=orotate phosphoribosyltransferase;protein_id=WJG96452.1;transl_table=11 CP118122.1 Genbank gene 3891394 3891990 . - . ID=gene-PUW34_18935;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=PUW34_18935 CP118122.1 Protein Homology CDS 3891394 3891990 . - 0 ID=cds-WJG96453.1;Parent=gene-PUW34_18935;Dbxref=NCBI_GP:WJG96453.1;Name=WJG96453.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=PUW34_18935;product=nucleoid occlusion factor SlmA;protein_id=WJG96453.1;transl_table=11 CP118122.1 Genbank gene 3892098 3892556 . - . ID=gene-PUW34_18940;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=PUW34_18940 CP118122.1 Protein Homology CDS 3892098 3892556 . - 0 ID=cds-WJG96454.1;Parent=gene-PUW34_18940;Dbxref=NCBI_GP:WJG96454.1;Name=WJG96454.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=PUW34_18940;product=dUTP diphosphatase;protein_id=WJG96454.1;transl_table=11 CP118122.1 Genbank gene 3892534 3893754 . - . ID=gene-PUW34_18945;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=PUW34_18945 CP118122.1 Protein Homology CDS 3892534 3893754 . - 0 ID=cds-WJG99046.1;Parent=gene-PUW34_18945;Dbxref=NCBI_GP:WJG99046.1;Name=WJG99046.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=PUW34_18945;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WJG99046.1;transl_table=11 CP118122.1 Genbank gene 3893930 3894595 . + . ID=gene-PUW34_18950;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PUW34_18950 CP118122.1 Protein Homology CDS 3893930 3894595 . + 0 ID=cds-WJG96455.1;Parent=gene-PUW34_18950;Dbxref=NCBI_GP:WJG96455.1;Name=WJG96455.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=PUW34_18950;product=DNA repair protein RadC;protein_id=WJG96455.1;transl_table=11 CP118122.1 Genbank gene 3894813 3895049 . + . ID=gene-PUW34_18955;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=PUW34_18955 CP118122.1 Protein Homology CDS 3894813 3895049 . + 0 ID=cds-WJG96456.1;Parent=gene-PUW34_18955;Dbxref=NCBI_GP:WJG96456.1;Name=WJG96456.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=PUW34_18955;product=50S ribosomal protein L28;protein_id=WJG96456.1;transl_table=11 CP118122.1 Genbank gene 3895070 3895237 . + . ID=gene-PUW34_18960;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PUW34_18960 CP118122.1 Protein Homology CDS 3895070 3895237 . + 0 ID=cds-WJG96457.1;Parent=gene-PUW34_18960;Dbxref=NCBI_GP:WJG96457.1;Name=WJG96457.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=PUW34_18960;product=50S ribosomal protein L33;protein_id=WJG96457.1;transl_table=11 CP118122.1 Genbank gene 3895335 3896144 . + . ID=gene-PUW34_18965;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=PUW34_18965 CP118122.1 Protein Homology CDS 3895335 3896144 . + 0 ID=cds-WJG96458.1;Parent=gene-PUW34_18965;Dbxref=NCBI_GP:WJG96458.1;Name=WJG96458.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=PUW34_18965;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WJG96458.1;transl_table=11 CP118122.1 Genbank gene 3896172 3896651 . - . ID=gene-PUW34_18970;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=PUW34_18970 CP118122.1 Protein Homology CDS 3896172 3896651 . - 0 ID=cds-WJG96459.1;Parent=gene-PUW34_18970;Dbxref=NCBI_GP:WJG96459.1;Name=WJG96459.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=PUW34_18970;product=pantetheine-phosphate adenylyltransferase;protein_id=WJG96459.1;transl_table=11 CP118122.1 Genbank gene 3896660 3897937 . - . ID=gene-PUW34_18975;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=PUW34_18975 CP118122.1 Protein Homology CDS 3896660 3897937 . - 0 ID=cds-WJG96460.1;Parent=gene-PUW34_18975;Dbxref=NCBI_GP:WJG96460.1;Name=WJG96460.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=PUW34_18975;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WJG96460.1;transl_table=11 CP118122.1 Genbank gene 3898346 3899416 . + . ID=gene-PUW34_18980;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=PUW34_18980 CP118122.1 Protein Homology CDS 3898346 3899416 . + 0 ID=cds-WJG96461.1;Parent=gene-PUW34_18980;Dbxref=NCBI_GP:WJG96461.1;Name=WJG96461.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=PUW34_18980;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WJG96461.1;transl_table=11 CP118122.1 Genbank gene 3899413 3900537 . + . ID=gene-PUW34_18985;Name=PUW34_18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18985 CP118122.1 Protein Homology CDS 3899413 3900537 . + 0 ID=cds-WJG96462.1;Parent=gene-PUW34_18985;Dbxref=NCBI_GP:WJG96462.1;Name=WJG96462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=PUW34_18985;product=glycosyltransferase family 4 protein;protein_id=WJG96462.1;transl_table=11 CP118122.1 Genbank gene 3900530 3901327 . + . ID=gene-PUW34_18990;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=PUW34_18990 CP118122.1 Protein Homology CDS 3900530 3901327 . + 0 ID=cds-WJG96463.1;Parent=gene-PUW34_18990;Dbxref=NCBI_GP:WJG96463.1;Name=WJG96463.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=PUW34_18990;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WJG96463.1;transl_table=11 CP118122.1 Genbank gene 3901383 3901592 . + . ID=gene-PUW34_18995;Name=PUW34_18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_18995 CP118122.1 GeneMarkS-2+ CDS 3901383 3901592 . + 0 ID=cds-WJG96464.1;Parent=gene-PUW34_18995;Dbxref=NCBI_GP:WJG96464.1;Name=WJG96464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_18995;product=hypothetical protein;protein_id=WJG96464.1;transl_table=11 CP118122.1 Genbank gene 3901662 3902741 . + . ID=gene-PUW34_19000;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=PUW34_19000 CP118122.1 Protein Homology CDS 3901662 3902741 . + 0 ID=cds-WJG96465.1;Parent=gene-PUW34_19000;Dbxref=NCBI_GP:WJG96465.1;Name=WJG96465.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=PUW34_19000;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WJG96465.1;transl_table=11 CP118122.1 Genbank gene 3902747 3903760 . + . ID=gene-PUW34_19005;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=PUW34_19005 CP118122.1 Protein Homology CDS 3902747 3903760 . + 0 ID=cds-WJG96466.1;Parent=gene-PUW34_19005;Dbxref=NCBI_GP:WJG96466.1;Name=WJG96466.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=PUW34_19005;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WJG96466.1;transl_table=11 CP118122.1 Genbank gene 3903796 3904791 . + . ID=gene-PUW34_19010;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=PUW34_19010 CP118122.1 Protein Homology CDS 3903796 3904791 . + 0 ID=cds-WJG99047.1;Parent=gene-PUW34_19010;Dbxref=NCBI_GP:WJG99047.1;Name=WJG99047.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=PUW34_19010;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WJG99047.1;transl_table=11 CP118122.1 Genbank gene 3904814 3905512 . + . ID=gene-PUW34_19015;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=PUW34_19015 CP118122.1 Protein Homology CDS 3904814 3905512 . + 0 ID=cds-WJG96467.1;Parent=gene-PUW34_19015;Dbxref=NCBI_GP:WJG96467.1;Name=WJG96467.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=PUW34_19015;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WJG96467.1;transl_table=11 CP118122.1 Genbank pseudogene 3905662 3906470 . + . ID=gene-PUW34_19020;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=pseudogene;locus_tag=PUW34_19020;pseudo=true CP118122.1 Protein Homology CDS 3905662 3906470 . + 0 ID=cds-PUW34_19020;Parent=gene-PUW34_19020;Note=frameshifted;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=PUW34_19020;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3906570 3907715 . + . ID=gene-PUW34_19025;Name=PUW34_19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19025 CP118122.1 Protein Homology CDS 3906570 3907715 . + 0 ID=cds-WJG96468.1;Parent=gene-PUW34_19025;Dbxref=NCBI_GP:WJG96468.1;Name=WJG96468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=PUW34_19025;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WJG96468.1;transl_table=11 CP118122.1 Genbank pseudogene 3907773 3908986 . - . ID=gene-PUW34_19030;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=pseudogene;locus_tag=PUW34_19030;pseudo=true CP118122.1 Protein Homology CDS 3907773 3908986 . - 0 ID=cds-PUW34_19030;Parent=gene-PUW34_19030;Note=frameshifted;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=PUW34_19030;product=O-antigen ligase RfaL;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3909026 3909979 . - . ID=gene-PUW34_19035;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=PUW34_19035 CP118122.1 Protein Homology CDS 3909026 3909979 . - 0 ID=cds-WJG96469.1;Parent=gene-PUW34_19035;Dbxref=NCBI_GP:WJG96469.1;Name=WJG96469.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=PUW34_19035;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WJG96469.1;transl_table=11 CP118122.1 Genbank gene 3909979 3911025 . - . ID=gene-PUW34_19040;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=PUW34_19040 CP118122.1 Protein Homology CDS 3909979 3911025 . - 0 ID=cds-WJG96470.1;Parent=gene-PUW34_19040;Dbxref=NCBI_GP:WJG96470.1;Name=WJG96470.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=PUW34_19040;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WJG96470.1;transl_table=11 CP118122.1 Genbank gene 3911028 3911960 . - . ID=gene-PUW34_19045;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=PUW34_19045 CP118122.1 Protein Homology CDS 3911028 3911960 . - 0 ID=cds-WJG96471.1;Parent=gene-PUW34_19045;Dbxref=NCBI_GP:WJG96471.1;Name=WJG96471.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=PUW34_19045;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WJG96471.1;transl_table=11 CP118122.1 Genbank pseudogene 3912163 3913358 . + . ID=gene-PUW34_19050;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=pseudogene;locus_tag=PUW34_19050;pseudo=true CP118122.1 Protein Homology CDS 3912163 3913358 . + 0 ID=cds-PUW34_19050;Parent=gene-PUW34_19050;Note=frameshifted;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=PUW34_19050;product=glycine C-acetyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3913368 3914393 . + . ID=gene-PUW34_19055;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=PUW34_19055 CP118122.1 Protein Homology CDS 3913368 3914393 . + 0 ID=cds-WJG96472.1;Parent=gene-PUW34_19055;Dbxref=NCBI_GP:WJG96472.1;Name=WJG96472.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=PUW34_19055;product=L-threonine 3-dehydrogenase;protein_id=WJG96472.1;transl_table=11 CP118122.1 Genbank gene 3914687 3915721 . + . ID=gene-PUW34_19060;Name=PUW34_19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19060 CP118122.1 Protein Homology CDS 3914687 3915721 . + 0 ID=cds-WJG96473.1;Parent=gene-PUW34_19060;Dbxref=NCBI_GP:WJG96473.1;Name=WJG96473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=PUW34_19060;product=glycosyltransferase;protein_id=WJG96473.1;transl_table=11 CP118122.1 Genbank gene 3915708 3916670 . - . ID=gene-PUW34_19065;Name=PUW34_19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19065 CP118122.1 Protein Homology CDS 3915708 3916670 . - 0 ID=cds-WJG96474.1;Parent=gene-PUW34_19065;Dbxref=NCBI_GP:WJG96474.1;Name=WJG96474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=PUW34_19065;product=divergent polysaccharide deacetylase family protein;protein_id=WJG96474.1;transl_table=11 CP118122.1 Genbank gene 3916674 3917933 . - . ID=gene-PUW34_19070;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=PUW34_19070 CP118122.1 Protein Homology CDS 3916674 3917933 . - 0 ID=cds-WJG99048.1;Parent=gene-PUW34_19070;Dbxref=NCBI_GP:WJG99048.1;Name=WJG99048.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=PUW34_19070;product=murein hydrolase activator EnvC;protein_id=WJG99048.1;transl_table=11 CP118122.1 Genbank gene 3917967 3919511 . - . ID=gene-PUW34_19075;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=PUW34_19075 CP118122.1 Protein Homology CDS 3917967 3919511 . - 0 ID=cds-WJG96475.1;Parent=gene-PUW34_19075;Dbxref=NCBI_GP:WJG96475.1;Name=WJG96475.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=PUW34_19075;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WJG96475.1;transl_table=11 CP118122.1 Genbank gene 3919758 3920189 . + . ID=gene-PUW34_19080;Name=PUW34_19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19080 CP118122.1 Protein Homology CDS 3919758 3920189 . + 0 ID=cds-WJG96476.1;Parent=gene-PUW34_19080;Dbxref=NCBI_GP:WJG96476.1;Name=WJG96476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=PUW34_19080;product=rhodanese-like domain-containing protein;protein_id=WJG96476.1;transl_table=11 CP118122.1 Genbank gene 3920276 3920527 . + . ID=gene-PUW34_19085;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=PUW34_19085 CP118122.1 Protein Homology CDS 3920276 3920527 . + 0 ID=cds-WJG96477.1;Parent=gene-PUW34_19085;Dbxref=NCBI_GP:WJG96477.1;Name=WJG96477.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=PUW34_19085;product=glutaredoxin 3;protein_id=WJG96477.1;transl_table=11 CP118122.1 Genbank gene 3920571 3921038 . + . ID=gene-PUW34_19090;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=PUW34_19090 CP118122.1 Protein Homology CDS 3920571 3921038 . + 0 ID=cds-WJG96478.1;Parent=gene-PUW34_19090;Dbxref=NCBI_GP:WJG96478.1;Name=WJG96478.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=PUW34_19090;product=protein-export chaperone SecB;protein_id=WJG96478.1;transl_table=11 CP118122.1 Genbank gene 3921038 3922057 . + . ID=gene-PUW34_19095;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=PUW34_19095 CP118122.1 Protein Homology CDS 3921038 3922057 . + 0 ID=cds-WJG96479.1;Parent=gene-PUW34_19095;Dbxref=NCBI_GP:WJG96479.1;Name=WJG96479.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=PUW34_19095;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WJG96479.1;transl_table=11 CP118122.1 Genbank gene 3922135 3922956 . + . ID=gene-PUW34_19100;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=PUW34_19100 CP118122.1 Protein Homology CDS 3922135 3922956 . + 0 ID=cds-WJG96480.1;Parent=gene-PUW34_19100;Dbxref=NCBI_GP:WJG96480.1;Name=WJG96480.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=PUW34_19100;product=serine O-acetyltransferase;protein_id=WJG96480.1;transl_table=11 CP118122.1 Genbank gene 3923039 3924349 . - . ID=gene-PUW34_19105;Name=PUW34_19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19105 CP118122.1 Protein Homology CDS 3923039 3924349 . - 0 ID=cds-WJG96481.1;Parent=gene-PUW34_19105;Dbxref=NCBI_GP:WJG96481.1;Name=WJG96481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=PUW34_19105;product=MFS transporter;protein_id=WJG96481.1;transl_table=11 CP118122.1 Genbank gene 3924423 3925619 . - . ID=gene-PUW34_19110;Name=PUW34_19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19110 CP118122.1 Protein Homology CDS 3924423 3925619 . - 0 ID=cds-WJG96482.1;Parent=gene-PUW34_19110;Dbxref=NCBI_GP:WJG96482.1;Name=WJG96482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=PUW34_19110;product=L-talarate/galactarate dehydratase;protein_id=WJG96482.1;transl_table=11 CP118122.1 Genbank gene 3925938 3926942 . + . ID=gene-PUW34_19115;Name=PUW34_19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19115 CP118122.1 Protein Homology CDS 3925938 3926942 . + 0 ID=cds-WJG96483.1;Parent=gene-PUW34_19115;Dbxref=NCBI_GP:WJG96483.1;Name=WJG96483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=PUW34_19115;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG96483.1;transl_table=11 CP118122.1 Genbank gene 3927010 3927483 . - . ID=gene-PUW34_19120;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=PUW34_19120 CP118122.1 Protein Homology CDS 3927010 3927483 . - 0 ID=cds-WJG96484.1;Parent=gene-PUW34_19120;Dbxref=NCBI_GP:WJG96484.1;Name=WJG96484.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=PUW34_19120;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WJG96484.1;transl_table=11 CP118122.1 Genbank gene 3927549 3928739 . - . ID=gene-PUW34_19125;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=PUW34_19125 CP118122.1 Protein Homology CDS 3927549 3928739 . - 0 ID=cds-WJG96485.1;Parent=gene-PUW34_19125;Dbxref=NCBI_GP:WJG96485.1;Name=WJG96485.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=PUW34_19125;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WJG96485.1;transl_table=11 CP118122.1 Genbank gene 3928736 3929512 . - . ID=gene-PUW34_19130;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=PUW34_19130 CP118122.1 Protein Homology CDS 3928736 3929512 . - 0 ID=cds-WJG96486.1;Parent=gene-PUW34_19130;Dbxref=NCBI_GP:WJG96486.1;Name=WJG96486.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=PUW34_19130;product=transcriptional regulator LldR;protein_id=WJG96486.1;transl_table=11 CP118122.1 Genbank pseudogene 3929509 3931165 . - . ID=gene-PUW34_19135;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=pseudogene;locus_tag=PUW34_19135;pseudo=true CP118122.1 Protein Homology CDS 3929509 3931165 . - 0 ID=cds-PUW34_19135;Parent=gene-PUW34_19135;Note=frameshifted;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=PUW34_19135;product=L-lactate permease;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3931464 3935720 . - . ID=gene-PUW34_19140;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=PUW34_19140 CP118122.1 Protein Homology CDS 3931464 3935720 . - 0 ID=cds-WJG96487.1;Parent=gene-PUW34_19140;Dbxref=NCBI_GP:WJG96487.1;Name=WJG96487.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=PUW34_19140;product=trimeric autotransporter adhesin SadA;protein_id=WJG96487.1;transl_table=11 CP118122.1 Genbank gene 3935764 3936447 . - . ID=gene-PUW34_19145;Name=PUW34_19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19145 CP118122.1 Protein Homology CDS 3935764 3936447 . - 0 ID=cds-WJG96488.1;Parent=gene-PUW34_19145;Dbxref=NCBI_GP:WJG96488.1;Name=WJG96488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=PUW34_19145;product=DUF3251 domain-containing protein;protein_id=WJG96488.1;transl_table=11 CP118122.1 Genbank gene 3936935 3937297 . - . ID=gene-PUW34_19150;Name=PUW34_19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19150 CP118122.1 Protein Homology CDS 3936935 3937297 . - 0 ID=cds-WJG96489.1;Parent=gene-PUW34_19150;Dbxref=NCBI_GP:WJG96489.1;Name=WJG96489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=PUW34_19150;product=YibL family ribosome-associated protein;protein_id=WJG96489.1;transl_table=11 CP118122.1 Genbank gene 3937588 3937797 . + . ID=gene-PUW34_19155;Name=PUW34_19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19155 CP118122.1 Protein Homology CDS 3937588 3937797 . + 0 ID=cds-WJG96490.1;Parent=gene-PUW34_19155;Dbxref=NCBI_GP:WJG96490.1;Name=WJG96490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=PUW34_19155;product=hypothetical protein;protein_id=WJG96490.1;transl_table=11 CP118122.1 Genbank gene 3937807 3938397 . - . ID=gene-PUW34_19160;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=PUW34_19160 CP118122.1 Protein Homology CDS 3937807 3938397 . - 0 ID=cds-WJG96491.1;Parent=gene-PUW34_19160;Dbxref=NCBI_GP:WJG96491.1;Name=WJG96491.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=PUW34_19160;product=mannitol operon repressor MtlR;protein_id=WJG96491.1;transl_table=11 CP118122.1 Genbank gene 3938394 3939542 . - . ID=gene-PUW34_19165;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=PUW34_19165 CP118122.1 Protein Homology CDS 3938394 3939542 . - 0 ID=cds-WJG96492.1;Parent=gene-PUW34_19165;Dbxref=NCBI_GP:WJG96492.1;Name=WJG96492.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=PUW34_19165;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WJG96492.1;transl_table=11 CP118122.1 Genbank gene 3939763 3941679 . - . ID=gene-PUW34_19170;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=PUW34_19170 CP118122.1 Protein Homology CDS 3939763 3941679 . - 0 ID=cds-WJG96493.1;Parent=gene-PUW34_19170;Dbxref=NCBI_GP:WJG96493.1;Name=WJG96493.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=PUW34_19170;product=PTS mannitol transporter subunit IICBA;protein_id=WJG96493.1;transl_table=11 CP118122.1 Genbank gene 3942155 3942763 . + . ID=gene-PUW34_19175;Name=PUW34_19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19175 CP118122.1 Protein Homology CDS 3942155 3942763 . + 0 ID=cds-WJG96494.1;Parent=gene-PUW34_19175;Dbxref=NCBI_GP:WJG96494.1;Name=WJG96494.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=PUW34_19175;product=glutathione S-transferase;protein_id=WJG96494.1;transl_table=11 CP118122.1 Genbank gene 3942862 3944253 . + . ID=gene-PUW34_19180;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=PUW34_19180 CP118122.1 Protein Homology CDS 3942862 3944253 . + 0 ID=cds-WJG96495.1;Parent=gene-PUW34_19180;Dbxref=NCBI_GP:WJG96495.1;Name=WJG96495.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=PUW34_19180;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WJG96495.1;transl_table=11 CP118122.1 Genbank gene 3944250 3946100 . + . ID=gene-PUW34_19185;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=PUW34_19185 CP118122.1 Protein Homology CDS 3944250 3946100 . + 0 ID=cds-WJG96496.1;Parent=gene-PUW34_19185;Dbxref=NCBI_GP:WJG96496.1;Name=WJG96496.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525;gbkey=CDS;gene=selB;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=PUW34_19185;product=selenocysteine-specific translation elongation factor;protein_id=WJG96496.1;transl_table=11 CP118122.1 Genbank gene 3946348 3947229 . - . ID=gene-PUW34_19190;Name=PUW34_19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19190 CP118122.1 Protein Homology CDS 3946348 3947229 . - 0 ID=cds-WJG96497.1;Parent=gene-PUW34_19190;Dbxref=NCBI_GP:WJG96497.1;Name=WJG96497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=PUW34_19190;product=ROK family protein;protein_id=WJG96497.1;transl_table=11 CP118122.1 Genbank gene 3947398 3948936 . + . ID=gene-PUW34_19195;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=PUW34_19195 CP118122.1 Protein Homology CDS 3947398 3948936 . + 0 ID=cds-WJG96498.1;Parent=gene-PUW34_19195;Dbxref=NCBI_GP:WJG96498.1;Name=WJG96498.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=PUW34_19195;product=aldehyde dehydrogenase AldB;protein_id=WJG96498.1;transl_table=11 CP118122.1 Genbank gene 3949054 3951009 . - . ID=gene-PUW34_19200;Name=PUW34_19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19200 CP118122.1 Protein Homology CDS 3949054 3951009 . - 0 ID=cds-WJG96499.1;Parent=gene-PUW34_19200;Dbxref=NCBI_GP:WJG96499.1;Name=WJG96499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=PUW34_19200;product=glycoside hydrolase family 127 protein;protein_id=WJG96499.1;transl_table=11 CP118122.1 Genbank gene 3951273 3952088 . + . ID=gene-PUW34_19205;Name=PUW34_19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19205 CP118122.1 Protein Homology CDS 3951273 3952088 . + 0 ID=cds-WJG96500.1;Parent=gene-PUW34_19205;Dbxref=NCBI_GP:WJG96500.1;Name=WJG96500.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=PUW34_19205;product=helix-turn-helix domain-containing protein;protein_id=WJG96500.1;transl_table=11 CP118122.1 Genbank gene 3952249 3952944 . - . ID=gene-PUW34_19210;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PUW34_19210 CP118122.1 Protein Homology CDS 3952249 3952944 . - 0 ID=cds-WJG96501.1;Parent=gene-PUW34_19210;Dbxref=NCBI_GP:WJG96501.1;Name=WJG96501.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=PUW34_19210;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJG96501.1;transl_table=11 CP118122.1 Genbank gene 3952938 3953798 . - . ID=gene-PUW34_19215;Name=PUW34_19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19215 CP118122.1 Protein Homology CDS 3952938 3953798 . - 0 ID=cds-WJG96502.1;Parent=gene-PUW34_19215;Dbxref=NCBI_GP:WJG96502.1;Name=WJG96502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=PUW34_19215;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WJG96502.1;transl_table=11 CP118122.1 Genbank gene 3953791 3954453 . - . ID=gene-PUW34_19220;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PUW34_19220 CP118122.1 Protein Homology CDS 3953791 3954453 . - 0 ID=cds-WJG96503.1;Parent=gene-PUW34_19220;Dbxref=NCBI_GP:WJG96503.1;Name=WJG96503.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=PUW34_19220;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WJG96503.1;transl_table=11 CP118122.1 Genbank pseudogene 3954450 3955944 . - . ID=gene-PUW34_19225;Name=PUW34_19225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19225;pseudo=true CP118122.1 Protein Homology CDS 3954450 3955944 . - 0 ID=cds-PUW34_19225;Parent=gene-PUW34_19225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=PUW34_19225;product=carbohydrate kinase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3955948 3956934 . - . ID=gene-PUW34_19230;Name=PUW34_19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19230 CP118122.1 Protein Homology CDS 3955948 3956934 . - 0 ID=cds-WJG96504.1;Parent=gene-PUW34_19230;Dbxref=NCBI_GP:WJG96504.1;Name=WJG96504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=PUW34_19230;product=TRAP transporter substrate-binding protein;protein_id=WJG96504.1;transl_table=11 CP118122.1 Genbank gene 3956946 3958223 . - . ID=gene-PUW34_19235;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=PUW34_19235 CP118122.1 Protein Homology CDS 3956946 3958223 . - 0 ID=cds-WJG96505.1;Parent=gene-PUW34_19235;Dbxref=NCBI_GP:WJG96505.1;Name=WJG96505.1;gbkey=CDS;gene=yiaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=PUW34_19235;product=2%2C3-diketo-L-gulonate transporter large permease YiaN;protein_id=WJG96505.1;transl_table=11 CP118122.1 Genbank gene 3958226 3958699 . - . ID=gene-PUW34_19240;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=PUW34_19240 CP118122.1 Protein Homology CDS 3958226 3958699 . - 0 ID=cds-WJG96506.1;Parent=gene-PUW34_19240;Dbxref=NCBI_GP:WJG96506.1;Name=WJG96506.1;gbkey=CDS;gene=yiaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=PUW34_19240;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WJG96506.1;transl_table=11 CP118122.1 Genbank gene 3958838 3959770 . - . ID=gene-PUW34_19245;Name=PUW34_19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19245 CP118122.1 Protein Homology CDS 3958838 3959770 . - 0 ID=cds-WJG96507.1;Parent=gene-PUW34_19245;Dbxref=NCBI_GP:WJG96507.1;Name=WJG96507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=PUW34_19245;product=DUF4862 family protein;protein_id=WJG96507.1;transl_table=11 CP118122.1 Genbank gene 3959794 3960258 . - . ID=gene-PUW34_19250;Name=PUW34_19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19250 CP118122.1 Protein Homology CDS 3959794 3960258 . - 0 ID=cds-WJG96508.1;Parent=gene-PUW34_19250;Dbxref=NCBI_GP:WJG96508.1;Name=WJG96508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=PUW34_19250;product=YhcH/YjgK/YiaL family protein;protein_id=WJG96508.1;transl_table=11 CP118122.1 Genbank gene 3960270 3961262 . - . ID=gene-PUW34_19255;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=PUW34_19255 CP118122.1 Protein Homology CDS 3960270 3961262 . - 0 ID=cds-WJG96509.1;Parent=gene-PUW34_19255;Dbxref=NCBI_GP:WJG96509.1;Name=WJG96509.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=PUW34_19255;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WJG96509.1;transl_table=11 CP118122.1 Genbank gene 3961492 3962292 . + . ID=gene-PUW34_19260;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=PUW34_19260 CP118122.1 Protein Homology CDS 3961492 3962292 . + 0 ID=cds-WJG96510.1;Parent=gene-PUW34_19260;Dbxref=NCBI_GP:WJG96510.1;Name=WJG96510.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=PUW34_19260;product=IclR family transcriptional regulator YiaJ;protein_id=WJG96510.1;transl_table=11 CP118122.1 Genbank gene 3962409 3962882 . + . ID=gene-PUW34_19265;Name=PUW34_19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19265 CP118122.1 Protein Homology CDS 3962409 3962882 . + 0 ID=cds-WJG96511.1;Parent=gene-PUW34_19265;Dbxref=NCBI_GP:WJG96511.1;Name=WJG96511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=PUW34_19265;product=4Fe-4S dicluster domain-containing protein;protein_id=WJG96511.1;transl_table=11 CP118122.1 Genbank gene 3962919 3964169 . - . ID=gene-PUW34_19270;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=PUW34_19270 CP118122.1 Protein Homology CDS 3962919 3964169 . - 0 ID=cds-WJG96512.1;Parent=gene-PUW34_19270;Dbxref=NCBI_GP:WJG96512.1;Name=WJG96512.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=PUW34_19270;product=valine--pyruvate transaminase;protein_id=WJG96512.1;transl_table=11 CP118122.1 Genbank pseudogene 3964343 3966354 . - . ID=gene-PUW34_19275;Name=PUW34_19275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19275;pseudo=true CP118122.1 Protein Homology CDS 3964343 3966354 . - 0 ID=cds-PUW34_19275;Parent=gene-PUW34_19275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=PUW34_19275;product=alpha-amylase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3966670 3967494 . + . ID=gene-PUW34_19280;Name=PUW34_19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19280 CP118122.1 Protein Homology CDS 3966670 3967494 . + 0 ID=cds-WJG96513.1;Parent=gene-PUW34_19280;Dbxref=NCBI_GP:WJG96513.1;Name=WJG96513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=PUW34_19280;product=protein bax;protein_id=WJG96513.1;transl_table=11 CP118122.1 Genbank gene 3967555 3968733 . - . ID=gene-PUW34_19285;Name=PUW34_19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19285 CP118122.1 Protein Homology CDS 3967555 3968733 . - 0 ID=cds-WJG96514.1;Parent=gene-PUW34_19285;Dbxref=NCBI_GP:WJG96514.1;Name=WJG96514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=PUW34_19285;product=XylR family transcriptional regulator;protein_id=WJG96514.1;transl_table=11 CP118122.1 Genbank gene 3969096 3970418 . + . ID=gene-PUW34_19290;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=PUW34_19290 CP118122.1 Protein Homology CDS 3969096 3970418 . + 0 ID=cds-WJG96515.1;Parent=gene-PUW34_19290;Dbxref=NCBI_GP:WJG96515.1;Name=WJG96515.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=PUW34_19290;product=xylose isomerase;protein_id=WJG96515.1;transl_table=11 CP118122.1 Genbank gene 3970518 3971972 . + . ID=gene-PUW34_19295;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=PUW34_19295 CP118122.1 Protein Homology CDS 3970518 3971972 . + 0 ID=cds-WJG99049.1;Parent=gene-PUW34_19295;Dbxref=NCBI_GP:WJG99049.1;Name=WJG99049.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=PUW34_19295;product=xylulokinase;protein_id=WJG99049.1;transl_table=11 CP118122.1 Genbank gene 3972147 3972500 . + . ID=gene-PUW34_19300;Name=PUW34_19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19300 CP118122.1 Protein Homology CDS 3972147 3972500 . + 0 ID=cds-WJG96516.1;Parent=gene-PUW34_19300;Dbxref=NCBI_GP:WJG96516.1;Name=WJG96516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=PUW34_19300;product=YiaA/YiaB family protein;protein_id=WJG96516.1;transl_table=11 CP118122.1 Genbank pseudogene 3972523 3973518 . - . ID=gene-PUW34_19305;Name=PUW34_19305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19305;pseudo=true CP118122.1 Protein Homology CDS 3972523 3973518 . - 0 ID=cds-PUW34_19305;Parent=gene-PUW34_19305;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=PUW34_19305;product=acyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3973684 3973986 . + . ID=gene-PUW34_19310;Name=PUW34_19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19310 CP118122.1 Protein Homology CDS 3973684 3973986 . + 0 ID=cds-WJG96517.1;Parent=gene-PUW34_19310;Dbxref=NCBI_GP:WJG96517.1;Name=WJG96517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=PUW34_19310;product=YsaB family lipoprotein;protein_id=WJG96517.1;transl_table=11 CP118122.1 Genbank gene 3974125 3975036 . + . ID=gene-PUW34_19315;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=PUW34_19315 CP118122.1 Protein Homology CDS 3974125 3975036 . + 0 ID=cds-WJG96518.1;Parent=gene-PUW34_19315;Dbxref=NCBI_GP:WJG96518.1;Name=WJG96518.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=PUW34_19315;product=glycine--tRNA ligase subunit alpha;protein_id=WJG96518.1;transl_table=11 CP118122.1 Genbank gene 3975046 3977115 . + . ID=gene-PUW34_19320;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=PUW34_19320 CP118122.1 Protein Homology CDS 3975046 3977115 . + 0 ID=cds-WJG96519.1;Parent=gene-PUW34_19320;Dbxref=NCBI_GP:WJG96519.1;Name=WJG96519.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=PUW34_19320;product=glycine--tRNA ligase subunit beta;protein_id=WJG96519.1;transl_table=11 CP118122.1 Genbank pseudogene 3977505 3977903 . + . ID=gene-PUW34_19325;Name=PUW34_19325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19325;pseudo=true CP118122.1 Protein Homology CDS 3977505 3977903 . + 0 ID=cds-PUW34_19325;Parent=gene-PUW34_19325;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=PUW34_19325;product=IS3 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3978075 3978542 . + . ID=gene-PUW34_19330;Name=PUW34_19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19330 CP118122.1 Protein Homology CDS 3978075 3978542 . + 0 ID=cds-WJG96520.1;Parent=gene-PUW34_19330;Dbxref=NCBI_GP:WJG96520.1;Name=WJG96520.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462554.1;locus_tag=PUW34_19330;product=GNAT family N-acetyltransferase;protein_id=WJG96520.1;transl_table=11 CP118122.1 Genbank gene 3978720 3979007 . + . ID=gene-PUW34_19335;Name=PUW34_19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19335 CP118122.1 Protein Homology CDS 3978720 3979007 . + 0 ID=cds-WJG96521.1;Parent=gene-PUW34_19335;Dbxref=NCBI_GP:WJG96521.1;Name=WJG96521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=PUW34_19335;product=DUF1778 domain-containing protein;protein_id=WJG96521.1;transl_table=11 CP118122.1 Genbank gene 3979022 3979480 . + . ID=gene-PUW34_19340;Name=PUW34_19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19340 CP118122.1 Protein Homology CDS 3979022 3979480 . + 0 ID=cds-WJG96522.1;Parent=gene-PUW34_19340;Dbxref=NCBI_GP:WJG96522.1;Name=WJG96522.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810665.1;locus_tag=PUW34_19340;product=GNAT family N-acetyltransferase;protein_id=WJG96522.1;transl_table=11 CP118122.1 Genbank gene 3979851 3980390 . - . ID=gene-PUW34_19345;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=PUW34_19345 CP118122.1 Protein Homology CDS 3979851 3980390 . - 0 ID=cds-WJG96523.1;Parent=gene-PUW34_19345;Dbxref=NCBI_GP:WJG96523.1;Name=WJG96523.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=PUW34_19345;product=copper-binding periplasmic metallochaperone CueP;protein_id=WJG96523.1;transl_table=11 CP118122.1 Genbank gene 3980564 3980776 . - . ID=gene-PUW34_19350;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=PUW34_19350 CP118122.1 Protein Homology CDS 3980564 3980776 . - 0 ID=cds-WJG96524.1;Parent=gene-PUW34_19350;Dbxref=NCBI_GP:WJG96524.1;Name=WJG96524.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=PUW34_19350;product=RNA chaperone/antiterminator CspA;protein_id=WJG96524.1;transl_table=11 CP118122.1 Genbank gene 3981063 3981353 . - . ID=gene-PUW34_19355;Name=PUW34_19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19355 CP118122.1 Protein Homology CDS 3981063 3981353 . - 0 ID=cds-WJG96525.1;Parent=gene-PUW34_19355;Dbxref=NCBI_GP:WJG96525.1;Name=WJG96525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=PUW34_19355;product=HTH-type transcriptional regulator;protein_id=WJG96525.1;transl_table=11 CP118122.1 Genbank gene 3981792 3982502 . + . ID=gene-PUW34_19360;Name=PUW34_19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19360 CP118122.1 Protein Homology CDS 3981792 3982502 . + 0 ID=cds-WJG96526.1;Parent=gene-PUW34_19360;Dbxref=NCBI_GP:WJG96526.1;Name=WJG96526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=PUW34_19360;product=DUF3053 domain-containing protein;protein_id=WJG96526.1;transl_table=11 CP118122.1 Genbank gene 3982552 3983526 . - . ID=gene-PUW34_19365;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=PUW34_19365 CP118122.1 Protein Homology CDS 3982552 3983526 . - 0 ID=cds-WJG96527.1;Parent=gene-PUW34_19365;Dbxref=NCBI_GP:WJG96527.1;Name=WJG96527.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=PUW34_19365;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WJG96527.1;transl_table=11 CP118122.1 Genbank gene 3983745 3984407 . - . ID=gene-PUW34_19370;Name=PUW34_19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19370 CP118122.1 Protein Homology CDS 3983745 3984407 . - 0 ID=cds-WJG96528.1;Parent=gene-PUW34_19370;Dbxref=NCBI_GP:WJG96528.1;Name=WJG96528.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=PUW34_19370;product=OmpA family lipoprotein;protein_id=WJG96528.1;transl_table=11 CP118122.1 Genbank gene 3984560 3986893 . + . ID=gene-PUW34_19375;Name=PUW34_19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19375 CP118122.1 Protein Homology CDS 3984560 3986893 . + 0 ID=cds-WJG96529.1;Parent=gene-PUW34_19375;Dbxref=NCBI_GP:WJG96529.1;Name=WJG96529.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=PUW34_19375;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WJG96529.1;transl_table=11 CP118122.1 Genbank gene 3986862 3987302 . - . ID=gene-PUW34_19380;Name=PUW34_19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19380 CP118122.1 Protein Homology CDS 3986862 3987302 . - 0 ID=cds-WJG96530.1;Parent=gene-PUW34_19380;Dbxref=NCBI_GP:WJG96530.1;Name=WJG96530.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=PUW34_19380;product=N-acetyltransferase;protein_id=WJG96530.1;transl_table=11 CP118122.1 Genbank gene 3987280 3987861 . - . ID=gene-PUW34_19385;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=PUW34_19385 CP118122.1 Protein Homology CDS 3987280 3987861 . - 0 ID=cds-WJG96531.1;Parent=gene-PUW34_19385;Dbxref=NCBI_GP:WJG96531.1;Name=WJG96531.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=PUW34_19385;product=DNA-3-methyladenine glycosylase I;protein_id=WJG96531.1;transl_table=11 CP118122.1 Genbank gene 3988018 3988722 . + . ID=gene-PUW34_19390;Name=PUW34_19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19390 CP118122.1 Protein Homology CDS 3988018 3988722 . + 0 ID=cds-WJG96532.1;Parent=gene-PUW34_19390;Dbxref=NCBI_GP:WJG96532.1;Name=WJG96532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=PUW34_19390;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WJG96532.1;transl_table=11 CP118122.1 Genbank pseudogene 3988744 3988878 . + . ID=gene-PUW34_19395;Name=PUW34_19395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19395;pseudo=true CP118122.1 Protein Homology CDS 3988744 3988878 . + 0 ID=cds-PUW34_19395;Parent=gene-PUW34_19395;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585546.1;locus_tag=PUW34_19395;product=oxalate/formate antiport family MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3989237 3989761 . + . ID=gene-PUW34_19400;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=PUW34_19400 CP118122.1 Protein Homology CDS 3989237 3989761 . + 0 ID=cds-WJG96533.1;Parent=gene-PUW34_19400;Dbxref=NCBI_GP:WJG96533.1;Name=WJG96533.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=PUW34_19400;product=long polar fimbria major subunit LpfA;protein_id=WJG96533.1;transl_table=11 CP118122.1 Genbank gene 3989846 3990544 . + . ID=gene-PUW34_19405;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=PUW34_19405 CP118122.1 Protein Homology CDS 3989846 3990544 . + 0 ID=cds-WJG96534.1;Parent=gene-PUW34_19405;Dbxref=NCBI_GP:WJG96534.1;Name=WJG96534.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=PUW34_19405;product=long polar fimbrial biogenesis chaperone LpfB;protein_id=WJG96534.1;transl_table=11 CP118122.1 Genbank pseudogene 3990567 3993094 . + . ID=gene-PUW34_19410;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=pseudogene;locus_tag=PUW34_19410;pseudo=true CP118122.1 Protein Homology CDS 3990567 3993094 . + 0 ID=cds-PUW34_19410;Parent=gene-PUW34_19410;Note=frameshifted;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=PUW34_19410;product=outer membrane usher protein LpfC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3993112 3994191 . + . ID=gene-PUW34_19415;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=PUW34_19415 CP118122.1 Protein Homology CDS 3993112 3994191 . + 0 ID=cds-WJG96535.1;Parent=gene-PUW34_19415;Dbxref=NCBI_GP:WJG96535.1;Name=WJG96535.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=PUW34_19415;product=long polar fimbrial protein LpfD;protein_id=WJG96535.1;transl_table=11 CP118122.1 Genbank gene 3994197 3994724 . + . ID=gene-PUW34_19420;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=PUW34_19420 CP118122.1 Protein Homology CDS 3994197 3994724 . + 0 ID=cds-WJG96536.1;Parent=gene-PUW34_19420;Dbxref=NCBI_GP:WJG96536.1;Name=WJG96536.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=PUW34_19420;product=long polar fimbrial protein LpfE;protein_id=WJG96536.1;transl_table=11 CP118122.1 Genbank pseudogene 3994942 3996632 . + . ID=gene-PUW34_19425;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=pseudogene;locus_tag=PUW34_19425;pseudo=true CP118122.1 Protein Homology CDS 3994942 3996632 . + 0 ID=cds-PUW34_19425;Parent=gene-PUW34_19425;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=PUW34_19425;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3996723 3996799 . + . ID=gene-PUW34_19430;Name=PUW34_19430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_19430 CP118122.1 tRNAscan-SE tRNA 3996723 3996799 . + . ID=rna-PUW34_19430;Parent=gene-PUW34_19430;anticodon=(pos:3996757..3996759);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_19430;product=tRNA-Pro CP118122.1 tRNAscan-SE exon 3996723 3996799 . + . ID=exon-PUW34_19430-1;Parent=rna-PUW34_19430;anticodon=(pos:3996757..3996759);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_19430;product=tRNA-Pro CP118122.1 Genbank gene 3996836 3996954 . + . ID=gene-PUW34_19435;Name=PUW34_19435;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW34_19435 CP118122.1 cmsearch ncRNA 3996836 3996954 . + . ID=rna-PUW34_19435;Parent=gene-PUW34_19435;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_19435;product=RtT sRNA CP118122.1 cmsearch exon 3996836 3996954 . + . ID=exon-PUW34_19435-1;Parent=rna-PUW34_19435;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_19435;product=RtT sRNA CP118122.1 Genbank pseudogene 3996945 3997944 . - . ID=gene-PUW34_19440;Name=PUW34_19440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19440;pseudo=true CP118122.1 Protein Homology CDS 3996945 3997944 . - 0 ID=cds-PUW34_19440;Parent=gene-PUW34_19440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=PUW34_19440;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 3998094 3999218 . + . ID=gene-PUW34_19445;Name=PUW34_19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19445 CP118122.1 Protein Homology CDS 3998094 3999218 . + 0 ID=cds-WJG96537.1;Parent=gene-PUW34_19445;Dbxref=NCBI_GP:WJG96537.1;Name=WJG96537.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=PUW34_19445;product=aryl-sulfate sulfotransferase;protein_id=WJG96537.1;transl_table=11 CP118122.1 Genbank gene 3999275 4000600 . + . ID=gene-PUW34_19450;Name=PUW34_19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19450 CP118122.1 Protein Homology CDS 3999275 4000600 . + 0 ID=cds-WJG96538.1;Parent=gene-PUW34_19450;Dbxref=NCBI_GP:WJG96538.1;Name=WJG96538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=PUW34_19450;product=uracil-xanthine permease family protein;protein_id=WJG96538.1;transl_table=11 CP118122.1 Genbank pseudogene 4001156 4002763 . + . ID=gene-PUW34_19455;Name=PUW34_19455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19455;pseudo=true CP118122.1 Protein Homology CDS 4001156 4002763 . + 0 ID=cds-PUW34_19455;Parent=gene-PUW34_19455;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=PUW34_19455;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4002920 4003936 . + . ID=gene-PUW34_19460;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=pseudogene;locus_tag=PUW34_19460;pseudo=true CP118122.1 Protein Homology CDS 4002920 4003936 . + 0 ID=cds-PUW34_19460;Parent=gene-PUW34_19460;Note=frameshifted;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=PUW34_19460;product=dipeptide ABC transporter permease DppB;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4003946 4004847 . + . ID=gene-PUW34_19465;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=pseudogene;locus_tag=PUW34_19465;pseudo=true CP118122.1 Protein Homology CDS 4003946 4004847 . + 0 ID=cds-PUW34_19465;Parent=gene-PUW34_19465;Note=frameshifted;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=PUW34_19465;product=dipeptide ABC transporter permease DppC;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4004858 4005841 . + . ID=gene-PUW34_19470;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=PUW34_19470 CP118122.1 Protein Homology CDS 4004858 4005841 . + 0 ID=cds-WJG96539.1;Parent=gene-PUW34_19470;Dbxref=NCBI_GP:WJG96539.1;Name=WJG96539.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=PUW34_19470;product=dipeptide ABC transporter ATP-binding protein;protein_id=WJG96539.1;transl_table=11 CP118122.1 Genbank gene 4005838 4006851 . + . ID=gene-PUW34_19475;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=PUW34_19475 CP118122.1 Protein Homology CDS 4005838 4006851 . + 0 ID=cds-WJG96540.1;Parent=gene-PUW34_19475;Dbxref=NCBI_GP:WJG96540.1;Name=WJG96540.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=PUW34_19475;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WJG96540.1;transl_table=11 CP118122.1 Genbank pseudogene 4006952 4008250 . - . ID=gene-PUW34_19480;Name=PUW34_19480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19480;pseudo=true CP118122.1 Protein Homology CDS 4006952 4008250 . - 0 ID=cds-PUW34_19480;Parent=gene-PUW34_19480;Note=internal stop;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=PUW34_19480;product=aromatic amino acid transport family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4008368 4008517 . - . ID=gene-PUW34_19485;Name=PUW34_19485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19485;pseudo=true CP118122.1 Protein Homology CDS 4008368 4008517 . - 0 ID=cds-PUW34_19485;Parent=gene-PUW34_19485;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.2;locus_tag=PUW34_19485;product=PLP-dependent transferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4008893 4009000 . + . ID=gene-PUW34_19490;Name=PUW34_19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19490 CP118122.1 Protein Homology CDS 4008893 4009000 . + 0 ID=cds-WJG96541.1;Parent=gene-PUW34_19490;Dbxref=NCBI_GP:WJG96541.1;Name=WJG96541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141634.1;locus_tag=PUW34_19490;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WJG96541.1;transl_table=11 CP118122.1 Genbank pseudogene 4009082 4010760 . - . ID=gene-PUW34_19495;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=pseudogene;locus_tag=PUW34_19495;pseudo=true CP118122.1 Protein Homology CDS 4009082 4010760 . - 0 ID=cds-PUW34_19495;Parent=gene-PUW34_19495;Note=frameshifted%3B internal stop;Ontology_term=GO:0030244,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsG;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=PUW34_19495;product=cellulose biosynthesis protein BcsG;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4010757 4010948 . - . ID=gene-PUW34_19500;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=PUW34_19500 CP118122.1 Protein Homology CDS 4010757 4010948 . - 0 ID=cds-WJG96542.1;Parent=gene-PUW34_19500;Dbxref=NCBI_GP:WJG96542.1;Name=WJG96542.1;Ontology_term=GO:0052324,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsF;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=PUW34_19500;product=cellulose biosynthesis protein BcsF;protein_id=WJG96542.1;transl_table=11 CP118122.1 Genbank gene 4010945 4012516 . - . ID=gene-PUW34_19505;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=PUW34_19505 CP118122.1 Protein Homology CDS 4010945 4012516 . - 0 ID=cds-WJG96543.1;Parent=gene-PUW34_19505;Dbxref=NCBI_GP:WJG96543.1;Name=WJG96543.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=PUW34_19505;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WJG96543.1;transl_table=11 CP118122.1 Genbank gene 4012761 4012964 . + . ID=gene-PUW34_19510;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=PUW34_19510 CP118122.1 Protein Homology CDS 4012761 4012964 . + 0 ID=cds-WJG96544.1;Parent=gene-PUW34_19510;Dbxref=NCBI_GP:WJG96544.1;Name=WJG96544.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=PUW34_19510;product=cellulose biosynthesis protein BcsR;protein_id=WJG96544.1;transl_table=11 CP118122.1 Genbank pseudogene 4012965 4013717 . + . ID=gene-PUW34_19515;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=pseudogene;locus_tag=PUW34_19515;pseudo=true CP118122.1 Protein Homology CDS 4012965 4013717 . + 0 ID=cds-PUW34_19515;Parent=gene-PUW34_19515;Note=internal stop;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=PUW34_19515;product=cellulose biosynthesis protein BcsQ;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4013714 4016338 . + . ID=gene-PUW34_19520;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=PUW34_19520 CP118122.1 Protein Homology CDS 4013714 4016338 . + 0 ID=cds-WJG96545.1;Parent=gene-PUW34_19520;Dbxref=NCBI_GP:WJG96545.1;Name=WJG96545.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=PUW34_19520;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WJG96545.1;transl_table=11 CP118122.1 Genbank gene 4016349 4018649 . + . ID=gene-PUW34_19525;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=PUW34_19525 CP118122.1 Protein Homology CDS 4016349 4018649 . + 0 ID=cds-WJG96546.1;Parent=gene-PUW34_19525;Dbxref=NCBI_GP:WJG96546.1;Name=WJG96546.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=PUW34_19525;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WJG96546.1;transl_table=11 CP118122.1 Genbank gene 4018653 4019762 . + . ID=gene-PUW34_19530;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=PUW34_19530 CP118122.1 Protein Homology CDS 4018653 4019762 . + 0 ID=cds-WJG96547.1;Parent=gene-PUW34_19530;Dbxref=NCBI_GP:WJG96547.1;Name=WJG96547.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=PUW34_19530;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WJG96547.1;transl_table=11 CP118122.1 Genbank gene 4019744 4023229 . + . ID=gene-PUW34_19535;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=PUW34_19535 CP118122.1 Protein Homology CDS 4019744 4023229 . + 0 ID=cds-WJG96548.1;Parent=gene-PUW34_19535;Dbxref=NCBI_GP:WJG96548.1;Name=WJG96548.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=PUW34_19535;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WJG96548.1;transl_table=11 CP118122.1 Genbank gene 4023403 4025409 . + . ID=gene-PUW34_19540;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=PUW34_19540 CP118122.1 Protein Homology CDS 4023403 4025409 . + 0 ID=cds-WJG96549.1;Parent=gene-PUW34_19540;Dbxref=NCBI_GP:WJG96549.1;Name=WJG96549.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=PUW34_19540;product=biofilm formation regulator HmsP;protein_id=WJG96549.1;transl_table=11 CP118122.1 Genbank gene 4025567 4026853 . + . ID=gene-PUW34_19545;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=PUW34_19545 CP118122.1 Protein Homology CDS 4025567 4026853 . + 0 ID=cds-WJG96550.1;Parent=gene-PUW34_19545;Dbxref=NCBI_GP:WJG96550.1;Name=WJG96550.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858227.1;locus_tag=PUW34_19545;product=C4-dicarboxylate transporter DctC;protein_id=WJG96550.1;transl_table=11 CP118122.1 Genbank gene 4027073 4028560 . + . ID=gene-PUW34_19550;Name=PUW34_19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19550 CP118122.1 Protein Homology CDS 4027073 4028560 . + 0 ID=cds-WJG96551.1;Parent=gene-PUW34_19550;Dbxref=NCBI_GP:WJG96551.1;Name=WJG96551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=PUW34_19550;product=pitrilysin family protein;protein_id=WJG96551.1;transl_table=11 CP118122.1 Genbank gene 4028614 4029543 . - . ID=gene-PUW34_19555;Name=PUW34_19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19555 CP118122.1 Protein Homology CDS 4028614 4029543 . - 0 ID=cds-WJG96552.1;Parent=gene-PUW34_19555;Dbxref=NCBI_GP:WJG96552.1;Name=WJG96552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=PUW34_19555;product=sugar kinase;protein_id=WJG96552.1;transl_table=11 CP118122.1 Genbank pseudogene 4029772 4030538 . + . ID=gene-PUW34_19560;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=pseudogene;locus_tag=PUW34_19560;pseudo=true CP118122.1 Protein Homology CDS 4029772 4030538 . + 0 ID=cds-PUW34_19560;Parent=gene-PUW34_19560;Note=frameshifted;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=PUW34_19560;product=cyclic-guanylate-specific phosphodiesterase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4030648 4032707 . + . ID=gene-PUW34_19565;Name=PUW34_19565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19565;pseudo=true CP118122.1 Protein Homology CDS 4030648 4032707 . + 0 ID=cds-PUW34_19565;Parent=gene-PUW34_19565;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=PUW34_19565;product=AsmA family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4032747 4034068 . - . ID=gene-PUW34_19570;Name=PUW34_19570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19570;pseudo=true CP118122.1 Protein Homology CDS 4032747 4034068 . - 0 ID=cds-PUW34_19570;Parent=gene-PUW34_19570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=PUW34_19570;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4034419 4035447 . - . ID=gene-PUW34_19575;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=PUW34_19575 CP118122.1 Protein Homology CDS 4034419 4035447 . - 0 ID=cds-WJG96553.1;Parent=gene-PUW34_19575;Dbxref=NCBI_GP:WJG96553.1;Name=WJG96553.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=PUW34_19575;product=inner membrane protein YhjD;protein_id=WJG96553.1;transl_table=11 CP118122.1 Genbank pseudogene 4035520 4036418 . - . ID=gene-PUW34_19580;Name=PUW34_19580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19580;pseudo=true CP118122.1 Protein Homology CDS 4035520 4036418 . - 0 ID=cds-PUW34_19580;Parent=gene-PUW34_19580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=PUW34_19580;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4037049 4037647 . + . ID=gene-PUW34_19585;Name=PUW34_19585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19585;pseudo=true CP118122.1 Protein Homology CDS 4037049 4037647 . + 0 ID=cds-PUW34_19585;Parent=gene-PUW34_19585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=PUW34_19585;product=response regulator transcription factor;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4037653 4038009 . - . ID=gene-PUW34_19590;Name=PUW34_19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19590 CP118122.1 Protein Homology CDS 4037653 4038009 . - 0 ID=cds-WJG96554.1;Parent=gene-PUW34_19590;Dbxref=NCBI_GP:WJG96554.1;Name=WJG96554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=PUW34_19590;product=lysozyme;protein_id=WJG96554.1;transl_table=11 CP118122.1 Genbank gene 4038290 4039879 . + . ID=gene-PUW34_19595;Name=PUW34_19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19595 CP118122.1 Protein Homology CDS 4038290 4039879 . + 0 ID=cds-WJG96555.1;Parent=gene-PUW34_19595;Dbxref=NCBI_GP:WJG96555.1;Name=WJG96555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=PUW34_19595;product=STY4199 family HEPN domain-containing protein;protein_id=WJG96555.1;transl_table=11 CP118122.1 Genbank gene 4039892 4041541 . - . ID=gene-PUW34_19600;Name=PUW34_19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19600 CP118122.1 Protein Homology CDS 4039892 4041541 . - 0 ID=cds-WJG96556.1;Parent=gene-PUW34_19600;Dbxref=NCBI_GP:WJG96556.1;Name=WJG96556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=PUW34_19600;product=alpha%2Calpha-trehalase;protein_id=WJG96556.1;transl_table=11 CP118122.1 Genbank gene 4041867 4042586 . + . ID=gene-PUW34_19605;Name=PUW34_19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19605 CP118122.1 Protein Homology CDS 4041867 4042586 . + 0 ID=cds-WJG96557.1;Parent=gene-PUW34_19605;Dbxref=NCBI_GP:WJG96557.1;Name=WJG96557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=PUW34_19605;product=GntR family transcriptional regulator;protein_id=WJG96557.1;transl_table=11 CP118122.1 Genbank pseudogene 4042762 4043738 . + . ID=gene-PUW34_19610;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=pseudogene;locus_tag=PUW34_19610;pseudo=true CP118122.1 Protein Homology CDS 4042762 4043738 . + 0 ID=cds-PUW34_19610;Parent=gene-PUW34_19610;Note=frameshifted;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=PUW34_19610;product=6-phosphofructose-aspartate deglycase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4043802 4044647 . + . ID=gene-PUW34_19615;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=PUW34_19615 CP118122.1 Protein Homology CDS 4043802 4044647 . + 0 ID=cds-WJG99050.1;Parent=gene-PUW34_19615;Dbxref=NCBI_GP:WJG99050.1;Name=WJG99050.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=PUW34_19615;product=fructose-aspartate kinase;protein_id=WJG99050.1;transl_table=11 CP118122.1 Genbank gene 4044701 4046020 . + . ID=gene-PUW34_19620;Name=PUW34_19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19620 CP118122.1 Protein Homology CDS 4044701 4046020 . + 0 ID=cds-WJG96558.1;Parent=gene-PUW34_19620;Dbxref=NCBI_GP:WJG96558.1;Name=WJG96558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=PUW34_19620;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WJG96558.1;transl_table=11 CP118122.1 Genbank gene 4046079 4047122 . + . ID=gene-PUW34_19625;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=PUW34_19625 CP118122.1 Protein Homology CDS 4046079 4047122 . + 0 ID=cds-WJG96559.1;Parent=gene-PUW34_19625;Dbxref=NCBI_GP:WJG96559.1;Name=WJG96559.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=PUW34_19625;product=fructose-asparagine asparaginase;protein_id=WJG96559.1;transl_table=11 CP118122.1 Genbank gene 4047169 4048521 . - . ID=gene-PUW34_19630;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=PUW34_19630 CP118122.1 Protein Homology CDS 4047169 4048521 . - 0 ID=cds-WJG96560.1;Parent=gene-PUW34_19630;Dbxref=NCBI_GP:WJG96560.1;Name=WJG96560.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=PUW34_19630;product=glutathione-disulfide reductase;protein_id=WJG96560.1;transl_table=11 CP118122.1 Genbank gene 4048626 4049468 . - . ID=gene-PUW34_19635;Name=PUW34_19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19635 CP118122.1 Protein Homology CDS 4048626 4049468 . - 0 ID=cds-WJG96561.1;Parent=gene-PUW34_19635;Dbxref=NCBI_GP:WJG96561.1;Name=WJG96561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=PUW34_19635;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WJG96561.1;transl_table=11 CP118122.1 Genbank gene 4049679 4050950 . + . ID=gene-PUW34_19640;Name=PUW34_19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19640 CP118122.1 Protein Homology CDS 4049679 4050950 . + 0 ID=cds-WJG96562.1;Parent=gene-PUW34_19640;Dbxref=NCBI_GP:WJG96562.1;Name=WJG96562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=PUW34_19640;product=phosphatase PAP2 family protein;protein_id=WJG96562.1;transl_table=11 CP118122.1 Genbank pseudogene 4051132 4053173 . + . ID=gene-PUW34_19645;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=pseudogene;locus_tag=PUW34_19645;pseudo=true CP118122.1 Protein Homology CDS 4051132 4053173 . + 0 ID=cds-PUW34_19645;Parent=gene-PUW34_19645;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013591.2;locus_tag=PUW34_19645;product=oligopeptidase A;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4053180 4053938 . + . ID=gene-PUW34_19650;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=PUW34_19650 CP118122.1 Protein Homology CDS 4053180 4053938 . + 0 ID=cds-WJG96563.1;Parent=gene-PUW34_19650;Dbxref=NCBI_GP:WJG96563.1;Name=WJG96563.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=PUW34_19650;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WJG96563.1;transl_table=11 CP118122.1 Genbank gene 4054030 4055502 . - . ID=gene-PUW34_19655;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=PUW34_19655 CP118122.1 Protein Homology CDS 4054030 4055502 . - 0 ID=cds-WJG96564.1;Parent=gene-PUW34_19655;Dbxref=NCBI_GP:WJG96564.1;Name=WJG96564.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=PUW34_19655;product=dipeptide/tripeptide permease DtpB;protein_id=WJG96564.1;transl_table=11 CP118122.1 Genbank gene 4055827 4056261 . - . ID=gene-PUW34_19660;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=PUW34_19660 CP118122.1 Protein Homology CDS 4055827 4056261 . - 0 ID=cds-WJG96565.1;Parent=gene-PUW34_19660;Dbxref=NCBI_GP:WJG96565.1;Name=WJG96565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=PUW34_19660;product=universal stress protein UspA;protein_id=WJG96565.1;transl_table=11 CP118122.1 Genbank gene 4056649 4056984 . + . ID=gene-PUW34_19665;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=PUW34_19665 CP118122.1 Protein Homology CDS 4056649 4056984 . + 0 ID=cds-WJG96566.1;Parent=gene-PUW34_19665;Dbxref=NCBI_GP:WJG96566.1;Name=WJG96566.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=PUW34_19665;product=universal stress protein UspB;protein_id=WJG96566.1;transl_table=11 CP118122.1 Genbank gene 4057125 4058621 . - . ID=gene-PUW34_19670;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=PUW34_19670 CP118122.1 Protein Homology CDS 4057125 4058621 . - 0 ID=cds-WJG96567.1;Parent=gene-PUW34_19670;Dbxref=NCBI_GP:WJG96567.1;Name=WJG96567.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=PUW34_19670;product=inorganic phosphate transporter PitA;protein_id=WJG96567.1;transl_table=11 CP118122.1 Genbank gene 4058852 4060048 . + . ID=gene-PUW34_19675;Name=PUW34_19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19675 CP118122.1 Protein Homology CDS 4058852 4060048 . + 0 ID=cds-WJG96568.1;Parent=gene-PUW34_19675;Dbxref=NCBI_GP:WJG96568.1;Name=WJG96568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=PUW34_19675;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WJG96568.1;transl_table=11 CP118122.1 Genbank gene 4060354 4061421 . + . ID=gene-PUW34_19680;Name=PUW34_19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19680 CP118122.1 Protein Homology CDS 4060354 4061421 . + 0 ID=cds-WJG96569.1;Parent=gene-PUW34_19680;Dbxref=NCBI_GP:WJG96569.1;Name=WJG96569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=PUW34_19680;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WJG96569.1;transl_table=11 CP118122.1 Genbank gene 4061418 4064159 . + . ID=gene-PUW34_19685;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=PUW34_19685 CP118122.1 Protein Homology CDS 4061418 4064159 . + 0 ID=cds-WJG96570.1;Parent=gene-PUW34_19685;Dbxref=NCBI_GP:WJG96570.1;Name=WJG96570.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=PUW34_19685;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WJG96570.1;transl_table=11 CP118122.1 Genbank gene 4064159 4065283 . + . ID=gene-PUW34_19690;Name=PUW34_19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19690 CP118122.1 Protein Homology CDS 4064159 4065283 . + 0 ID=cds-WJG96571.1;Parent=gene-PUW34_19690;Dbxref=NCBI_GP:WJG96571.1;Name=WJG96571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=PUW34_19690;product=ABC transporter permease;protein_id=WJG96571.1;transl_table=11 CP118122.1 Genbank gene 4065372 4065773 . - . ID=gene-PUW34_19695;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=PUW34_19695 CP118122.1 Protein Homology CDS 4065372 4065773 . - 0 ID=cds-WJG96572.1;Parent=gene-PUW34_19695;Dbxref=NCBI_GP:WJG96572.1;Name=WJG96572.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=PUW34_19695;product=nickel-responsive transcriptional regulator NikR;protein_id=WJG96572.1;transl_table=11 CP118122.1 Genbank gene 4065865 4066443 . - . ID=gene-PUW34_19700;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=PUW34_19700 CP118122.1 Protein Homology CDS 4065865 4066443 . - 0 ID=cds-WJG96573.1;Parent=gene-PUW34_19700;Dbxref=NCBI_GP:WJG96573.1;Name=WJG96573.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=PUW34_19700;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WJG96573.1;transl_table=11 CP118122.1 Genbank gene 4066495 4067544 . - . ID=gene-PUW34_19705;Name=PUW34_19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19705 CP118122.1 Protein Homology CDS 4066495 4067544 . - 0 ID=cds-WJG96574.1;Parent=gene-PUW34_19705;Dbxref=NCBI_GP:WJG96574.1;Name=WJG96574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=PUW34_19705;product=AI-2E family transporter;protein_id=WJG96574.1;transl_table=11 CP118122.1 Genbank gene 4067634 4068893 . + . ID=gene-PUW34_19710;Name=PUW34_19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19710 CP118122.1 Protein Homology CDS 4067634 4068893 . + 0 ID=cds-WJG96575.1;Parent=gene-PUW34_19710;Dbxref=NCBI_GP:WJG96575.1;Name=WJG96575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=PUW34_19710;product=MFS transporter;protein_id=WJG96575.1;transl_table=11 CP118122.1 Genbank gene 4068897 4069454 . - . ID=gene-PUW34_19715;Name=PUW34_19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19715 CP118122.1 Protein Homology CDS 4068897 4069454 . - 0 ID=cds-WJG96576.1;Parent=gene-PUW34_19715;Dbxref=NCBI_GP:WJG96576.1;Name=WJG96576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=PUW34_19715;product=DcrB family lipoprotein;protein_id=WJG96576.1;transl_table=11 CP118122.1 Genbank gene 4069527 4070192 . - . ID=gene-PUW34_19720;Name=PUW34_19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19720 CP118122.1 Protein Homology CDS 4069527 4070192 . - 0 ID=cds-WJG96577.1;Parent=gene-PUW34_19720;Dbxref=NCBI_GP:WJG96577.1;Name=WJG96577.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=PUW34_19720;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WJG96577.1;transl_table=11 CP118122.1 Genbank gene 4070362 4070607 . + . ID=gene-PUW34_19725;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=PUW34_19725 CP118122.1 Protein Homology CDS 4070362 4070607 . + 0 ID=cds-WJG99051.1;Parent=gene-PUW34_19725;Dbxref=NCBI_GP:WJG99051.1;Name=WJG99051.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=PUW34_19725;product=sulfurtransferase TusA;protein_id=WJG99051.1;transl_table=11 CP118122.1 Genbank gene 4070631 4072274 . - . ID=gene-PUW34_19730;Name=PUW34_19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19730 CP118122.1 Protein Homology CDS 4070631 4072274 . - 0 ID=cds-WJG96578.1;Parent=gene-PUW34_19730;Dbxref=NCBI_GP:WJG96578.1;Name=WJG96578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=PUW34_19730;product=methyl-accepting chemotaxis citrate transducer;protein_id=WJG96578.1;transl_table=11 CP118122.1 Genbank gene 4072474 4074672 . - . ID=gene-PUW34_19735;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=PUW34_19735 CP118122.1 Protein Homology CDS 4072474 4074672 . - 0 ID=cds-WJG96579.1;Parent=gene-PUW34_19735;Dbxref=NCBI_GP:WJG96579.1;Name=WJG96579.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=PUW34_19735;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WJG96579.1;transl_table=11 CP118122.1 Genbank gene 4074753 4075379 . - . ID=gene-PUW34_19740;Name=PUW34_19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19740 CP118122.1 Protein Homology CDS 4074753 4075379 . - 0 ID=cds-WJG96580.1;Parent=gene-PUW34_19740;Dbxref=NCBI_GP:WJG96580.1;Name=WJG96580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=PUW34_19740;product=lysoplasmalogenase;protein_id=WJG96580.1;transl_table=11 CP118122.1 Genbank gene 4075521 4075892 . + . ID=gene-PUW34_19745;Name=PUW34_19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19745 CP118122.1 Protein Homology CDS 4075521 4075892 . + 0 ID=cds-WJG96581.1;Parent=gene-PUW34_19745;Dbxref=NCBI_GP:WJG96581.1;Name=WJG96581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=PUW34_19745;product=DUF2500 domain-containing protein;protein_id=WJG96581.1;transl_table=11 CP118122.1 Genbank gene 4075914 4076183 . - . ID=gene-PUW34_19750;Name=PUW34_19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19750 CP118122.1 Protein Homology CDS 4075914 4076183 . - 0 ID=cds-WJG99052.1;Parent=gene-PUW34_19750;Dbxref=NCBI_GP:WJG99052.1;Name=WJG99052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=PUW34_19750;product=DUF1145 family protein;protein_id=WJG99052.1;transl_table=11 CP118122.1 Genbank gene 4076173 4076769 . - . ID=gene-PUW34_19755;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=PUW34_19755 CP118122.1 Protein Homology CDS 4076173 4076769 . - 0 ID=cds-WJG96582.1;Parent=gene-PUW34_19755;Dbxref=NCBI_GP:WJG96582.1;Name=WJG96582.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=PUW34_19755;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WJG96582.1;transl_table=11 CP118122.1 Genbank gene 4076895 4078370 . + . ID=gene-PUW34_19760;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=PUW34_19760 CP118122.1 Protein Homology CDS 4076895 4078370 . + 0 ID=cds-WJG96583.1;Parent=gene-PUW34_19760;Dbxref=NCBI_GP:WJG96583.1;Name=WJG96583.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=PUW34_19760;product=signal recognition particle-docking protein FtsY;protein_id=WJG96583.1;transl_table=11 CP118122.1 Genbank gene 4078373 4079041 . + . ID=gene-PUW34_19765;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=PUW34_19765 CP118122.1 Protein Homology CDS 4078373 4079041 . + 0 ID=cds-WJG96584.1;Parent=gene-PUW34_19765;Dbxref=NCBI_GP:WJG96584.1;Name=WJG96584.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=PUW34_19765;product=cell division ATP-binding protein FtsE;protein_id=WJG96584.1;transl_table=11 CP118122.1 Genbank gene 4079034 4080089 . + . ID=gene-PUW34_19770;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=PUW34_19770 CP118122.1 Protein Homology CDS 4079034 4080089 . + 0 ID=cds-WJG96585.1;Parent=gene-PUW34_19770;Dbxref=NCBI_GP:WJG96585.1;Name=WJG96585.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=PUW34_19770;product=permease-like cell division protein FtsX;protein_id=WJG96585.1;transl_table=11 CP118122.1 Genbank pseudogene 4080335 4081188 . + . ID=gene-PUW34_19775;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=pseudogene;locus_tag=PUW34_19775;pseudo=true CP118122.1 Protein Homology CDS 4080335 4081188 . + 0 ID=cds-PUW34_19775;Parent=gene-PUW34_19775;Note=frameshifted;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=PUW34_19775;product=RNA polymerase sigma factor RpoH;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4081510 4082613 . + . ID=gene-PUW34_19780;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=PUW34_19780 CP118122.1 Protein Homology CDS 4081510 4082613 . + 0 ID=cds-WJG96586.1;Parent=gene-PUW34_19780;Dbxref=NCBI_GP:WJG96586.1;Name=WJG96586.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=PUW34_19780;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WJG96586.1;transl_table=11 CP118122.1 Genbank gene 4082697 4082831 . - . ID=gene-PUW34_19785;Name=PUW34_19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19785 CP118122.1 Protein Homology CDS 4082697 4082831 . - 0 ID=cds-WJG96587.1;Parent=gene-PUW34_19785;Dbxref=NCBI_GP:WJG96587.1;Name=WJG96587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=PUW34_19785;product=hypothetical protein;protein_id=WJG96587.1;transl_table=11 CP118122.1 Genbank gene 4082809 4083192 . - . ID=gene-PUW34_19790;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=PUW34_19790 CP118122.1 Protein Homology CDS 4082809 4083192 . - 0 ID=cds-WJG96588.1;Parent=gene-PUW34_19790;Dbxref=NCBI_GP:WJG96588.1;Name=WJG96588.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=PUW34_19790;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WJG96588.1;transl_table=11 CP118122.1 Genbank gene 4083613 4084722 . + . ID=gene-PUW34_19795;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=PUW34_19795 CP118122.1 Protein Homology CDS 4083613 4084722 . + 0 ID=cds-WJG96589.1;Parent=gene-PUW34_19795;Dbxref=NCBI_GP:WJG96589.1;Name=WJG96589.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=PUW34_19795;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WJG96589.1;transl_table=11 CP118122.1 Genbank gene 4084782 4085708 . + . ID=gene-PUW34_19800;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=PUW34_19800 CP118122.1 Protein Homology CDS 4084782 4085708 . + 0 ID=cds-WJG96590.1;Parent=gene-PUW34_19800;Dbxref=NCBI_GP:WJG96590.1;Name=WJG96590.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=PUW34_19800;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WJG96590.1;transl_table=11 CP118122.1 Genbank gene 4085705 4086982 . + . ID=gene-PUW34_19805;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=PUW34_19805 CP118122.1 Protein Homology CDS 4085705 4086982 . + 0 ID=cds-WJG96591.1;Parent=gene-PUW34_19805;Dbxref=NCBI_GP:WJG96591.1;Name=WJG96591.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=PUW34_19805;product=branched chain amino acid ABC transporter permease LivM;protein_id=WJG96591.1;transl_table=11 CP118122.1 Genbank gene 4086979 4087746 . + . ID=gene-PUW34_19810;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=PUW34_19810 CP118122.1 Protein Homology CDS 4086979 4087746 . + 0 ID=cds-WJG96592.1;Parent=gene-PUW34_19810;Dbxref=NCBI_GP:WJG96592.1;Name=WJG96592.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=PUW34_19810;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WJG96592.1;transl_table=11 CP118122.1 Genbank gene 4087748 4088461 . + . ID=gene-PUW34_19815;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=PUW34_19815 CP118122.1 Protein Homology CDS 4087748 4088461 . + 0 ID=cds-WJG96593.1;Parent=gene-PUW34_19815;Dbxref=NCBI_GP:WJG96593.1;Name=WJG96593.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=PUW34_19815;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WJG96593.1;transl_table=11 CP118122.1 Genbank gene 4088592 4088813 . + . ID=gene-PUW34_19820;Name=PUW34_19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19820 CP118122.1 Protein Homology CDS 4088592 4088813 . + 0 ID=cds-WJG96594.1;Parent=gene-PUW34_19820;Dbxref=NCBI_GP:WJG96594.1;Name=WJG96594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=PUW34_19820;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WJG96594.1;transl_table=11 CP118122.1 Genbank gene 4088810 4089178 . + . ID=gene-PUW34_19825;Name=PUW34_19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19825 CP118122.1 Protein Homology CDS 4088810 4089178 . + 0 ID=cds-WJG96595.1;Parent=gene-PUW34_19825;Dbxref=NCBI_GP:WJG96595.1;Name=WJG96595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=PUW34_19825;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WJG96595.1;transl_table=11 CP118122.1 Genbank gene 4089437 4090753 . + . ID=gene-PUW34_19830;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=PUW34_19830 CP118122.1 Protein Homology CDS 4089437 4090753 . + 0 ID=cds-WJG96596.1;Parent=gene-PUW34_19830;Dbxref=NCBI_GP:WJG96596.1;Name=WJG96596.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=PUW34_19830;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WJG96596.1;transl_table=11 CP118122.1 Genbank gene 4090858 4091745 . + . ID=gene-PUW34_19835;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=PUW34_19835 CP118122.1 Protein Homology CDS 4090858 4091745 . + 0 ID=cds-WJG96597.1;Parent=gene-PUW34_19835;Dbxref=NCBI_GP:WJG96597.1;Name=WJG96597.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=PUW34_19835;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WJG96597.1;transl_table=11 CP118122.1 Genbank gene 4091742 4092587 . + . ID=gene-PUW34_19840;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=PUW34_19840 CP118122.1 Protein Homology CDS 4091742 4092587 . + 0 ID=cds-WJG96598.1;Parent=gene-PUW34_19840;Dbxref=NCBI_GP:WJG96598.1;Name=WJG96598.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=PUW34_19840;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WJG96598.1;transl_table=11 CP118122.1 Genbank gene 4092589 4093659 . + . ID=gene-PUW34_19845;Name=PUW34_19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19845 CP118122.1 Protein Homology CDS 4092589 4093659 . + 0 ID=cds-WJG96599.1;Parent=gene-PUW34_19845;Dbxref=NCBI_GP:WJG96599.1;Name=WJG96599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=PUW34_19845;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WJG96599.1;transl_table=11 CP118122.1 Genbank gene 4093656 4094396 . + . ID=gene-PUW34_19850;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=PUW34_19850 CP118122.1 Protein Homology CDS 4093656 4094396 . + 0 ID=cds-WJG96600.1;Parent=gene-PUW34_19850;Dbxref=NCBI_GP:WJG96600.1;Name=WJG96600.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=PUW34_19850;product=glycerophosphodiester phosphodiesterase;protein_id=WJG96600.1;transl_table=11 CP118122.1 Genbank gene 4094409 4094825 . - . ID=gene-PUW34_19855;Name=PUW34_19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19855 CP118122.1 Protein Homology CDS 4094409 4094825 . - 0 ID=cds-WJG96601.1;Parent=gene-PUW34_19855;Dbxref=NCBI_GP:WJG96601.1;Name=WJG96601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=PUW34_19855;product=DUF2756 family protein;protein_id=WJG96601.1;transl_table=11 CP118122.1 Genbank gene 4094951 4096693 . + . ID=gene-PUW34_19860;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=PUW34_19860 CP118122.1 Protein Homology CDS 4094951 4096693 . + 0 ID=cds-WJG96602.1;Parent=gene-PUW34_19860;Dbxref=NCBI_GP:WJG96602.1;Name=WJG96602.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=PUW34_19860;product=gamma-glutamyltransferase;protein_id=WJG96602.1;transl_table=11 CP118122.1 Genbank pseudogene 4096738 4097771 . - . ID=gene-PUW34_19865;Name=PUW34_19865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19865;pseudo=true CP118122.1 Protein Homology CDS 4096738 4097771 . - 0 ID=cds-PUW34_19865;Parent=gene-PUW34_19865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=PUW34_19865;product=phosphotriesterase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4097768 4098739 . - . ID=gene-PUW34_19870;Name=PUW34_19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19870 CP118122.1 Protein Homology CDS 4097768 4098739 . - 0 ID=cds-WJG96603.1;Parent=gene-PUW34_19870;Dbxref=NCBI_GP:WJG96603.1;Name=WJG96603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=PUW34_19870;product=DMT family transporter;protein_id=WJG96603.1;transl_table=11 CP118122.1 Genbank gene 4098793 4099554 . - . ID=gene-PUW34_19875;Name=PUW34_19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19875 CP118122.1 Protein Homology CDS 4098793 4099554 . - 0 ID=cds-WJG96604.1;Parent=gene-PUW34_19875;Dbxref=NCBI_GP:WJG96604.1;Name=WJG96604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=PUW34_19875;product=glutamine amidotransferase;protein_id=WJG96604.1;transl_table=11 CP118122.1 Genbank gene 4099570 4100784 . - . ID=gene-PUW34_19880;Name=PUW34_19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19880 CP118122.1 Protein Homology CDS 4099570 4100784 . - 0 ID=cds-WJG96605.1;Parent=gene-PUW34_19880;Dbxref=NCBI_GP:WJG96605.1;Name=WJG96605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=PUW34_19880;product=PfkB family carbohydrate kinase;protein_id=WJG96605.1;transl_table=11 CP118122.1 Genbank gene 4101049 4101537 . - . ID=gene-PUW34_19885;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=PUW34_19885 CP118122.1 Protein Homology CDS 4101049 4101537 . - 0 ID=cds-WJG96606.1;Parent=gene-PUW34_19885;Dbxref=NCBI_GP:WJG96606.1;Name=WJG96606.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=PUW34_19885;product=N-acetyltransferase;protein_id=WJG96606.1;transl_table=11 CP118122.1 Genbank gene 4102004 4103041 . + . ID=gene-PUW34_19890;Name=PUW34_19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19890 CP118122.1 Protein Homology CDS 4102004 4103041 . + 0 ID=cds-WJG96607.1;Parent=gene-PUW34_19890;Dbxref=NCBI_GP:WJG96607.1;Name=WJG96607.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=PUW34_19890;product=oxidoreductase;protein_id=WJG96607.1;transl_table=11 CP118122.1 Genbank gene 4103165 4103860 . + . ID=gene-PUW34_19895;Name=PUW34_19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19895 CP118122.1 Protein Homology CDS 4103165 4103860 . + 0 ID=cds-WJG96608.1;Parent=gene-PUW34_19895;Dbxref=NCBI_GP:WJG96608.1;Name=WJG96608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=PUW34_19895;product=pirin family protein;protein_id=WJG96608.1;transl_table=11 CP118122.1 Genbank gene 4104230 4105225 . + . ID=gene-PUW34_19900;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=PUW34_19900 CP118122.1 Protein Homology CDS 4104230 4105225 . + 0 ID=cds-WJG96609.1;Parent=gene-PUW34_19900;Dbxref=NCBI_GP:WJG96609.1;Name=WJG96609.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=PUW34_19900;product=gluconate operon transcriptional repressor GntR;protein_id=WJG96609.1;transl_table=11 CP118122.1 Genbank gene 4105364 4105897 . + . ID=gene-PUW34_19905;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=PUW34_19905 CP118122.1 Protein Homology CDS 4105364 4105897 . + 0 ID=cds-WJG96610.1;Parent=gene-PUW34_19905;Dbxref=NCBI_GP:WJG96610.1;Name=WJG96610.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=PUW34_19905;product=gluconokinase;protein_id=WJG96610.1;transl_table=11 CP118122.1 Genbank gene 4105894 4107234 . + . ID=gene-PUW34_19910;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=PUW34_19910 CP118122.1 Protein Homology CDS 4105894 4107234 . + 0 ID=cds-WJG96611.1;Parent=gene-PUW34_19910;Dbxref=NCBI_GP:WJG96611.1;Name=WJG96611.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=PUW34_19910;product=gluconate transporter;protein_id=WJG96611.1;transl_table=11 CP118122.1 Genbank pseudogene 4107157 4107531 . - . ID=gene-PUW34_19915;Name=PUW34_19915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19915;pseudo=true CP118122.1 Protein Homology CDS 4107157 4107531 . - 0 ID=cds-PUW34_19915;Parent=gene-PUW34_19915;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=PUW34_19915;product=MarC family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4107718 4108607 . + . ID=gene-PUW34_19920;Name=asd;gbkey=Gene;gene=asd;gene_biotype=pseudogene;locus_tag=PUW34_19920;pseudo=true CP118122.1 Protein Homology CDS 4107718 4108607 . + 0 ID=cds-PUW34_19920;Parent=gene-PUW34_19920;Note=frameshifted;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: protein motif:HMM:NF005144.0;locus_tag=PUW34_19920;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4108529 4108762 . + . ID=gene-PUW34_19925;Name=PUW34_19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19925 CP118122.1 Protein Homology CDS 4108529 4108762 . + 0 ID=cds-WJG96612.1;Parent=gene-PUW34_19925;Dbxref=NCBI_GP:WJG96612.1;Name=WJG96612.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: protein motif:HMM:NF014793.2;locus_tag=PUW34_19925;product=Asd/ArgC dimerization domain-containing protein;protein_id=WJG96612.1;transl_table=11 CP118122.1 Genbank pseudogene 4109109 4111243 . + . ID=gene-PUW34_19930;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=pseudogene;locus_tag=PUW34_19930;pseudo=true CP118122.1 Protein Homology CDS 4109109 4111243 . + 0 ID=cds-PUW34_19930;Parent=gene-PUW34_19930;Note=frameshifted;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=PUW34_19930;product=1%2C4-alpha-glucan branching enzyme;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4111240 4113216 . + . ID=gene-PUW34_19935;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PUW34_19935 CP118122.1 Protein Homology CDS 4111240 4113216 . + 0 ID=cds-WJG96613.1;Parent=gene-PUW34_19935;Dbxref=NCBI_GP:WJG96613.1;Name=WJG96613.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=PUW34_19935;product=glycogen debranching protein GlgX;protein_id=WJG96613.1;transl_table=11 CP118122.1 Genbank pseudogene 4113231 4114515 . + . ID=gene-PUW34_19940;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=pseudogene;locus_tag=PUW34_19940;pseudo=true CP118122.1 Protein Homology CDS 4113231 4114515 . + 0 ID=cds-PUW34_19940;Parent=gene-PUW34_19940;Note=frameshifted;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=PUW34_19940;product=glucose-1-phosphate adenylyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4114515 4115950 . + . ID=gene-PUW34_19945;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=pseudogene;locus_tag=PUW34_19945;pseudo=true CP118122.1 Protein Homology CDS 4114515 4115950 . + 0 ID=cds-PUW34_19945;Parent=gene-PUW34_19945;Note=frameshifted;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=PUW34_19945;product=glycogen synthase GlgA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4115970 4118417 . + . ID=gene-PUW34_19950;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=PUW34_19950 CP118122.1 Protein Homology CDS 4115970 4118417 . + 0 ID=cds-WJG96614.1;Parent=gene-PUW34_19950;Dbxref=NCBI_GP:WJG96614.1;Name=WJG96614.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=PUW34_19950;product=glycogen phosphorylase;protein_id=WJG96614.1;transl_table=11 CP118122.1 Genbank gene 4118595 4119350 . + . ID=gene-PUW34_19955;Name=PUW34_19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19955 CP118122.1 Protein Homology CDS 4118595 4119350 . + 0 ID=cds-WJG96615.1;Parent=gene-PUW34_19955;Dbxref=NCBI_GP:WJG96615.1;Name=WJG96615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=PUW34_19955;product=IclR family transcriptional regulator;protein_id=WJG96615.1;transl_table=11 CP118122.1 Genbank pseudogene 4119394 4120298 . - . ID=gene-PUW34_19960;Name=PUW34_19960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_19960;pseudo=true CP118122.1 Protein Homology CDS 4119394 4120298 . - 0 ID=cds-PUW34_19960;Parent=gene-PUW34_19960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=PUW34_19960;product=dihydrodipicolinate synthase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4120342 4122057 . - . ID=gene-PUW34_19965;Name=PUW34_19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19965 CP118122.1 Protein Homology CDS 4120342 4122057 . - 0 ID=cds-WJG96616.1;Parent=gene-PUW34_19965;Dbxref=NCBI_GP:WJG96616.1;Name=WJG96616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=PUW34_19965;product=dihydroxy-acid dehydratase;protein_id=WJG96616.1;transl_table=11 CP118122.1 Genbank gene 4122054 4123388 . - . ID=gene-PUW34_19970;Name=PUW34_19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19970 CP118122.1 Protein Homology CDS 4122054 4123388 . - 0 ID=cds-WJG96617.1;Parent=gene-PUW34_19970;Dbxref=NCBI_GP:WJG96617.1;Name=WJG96617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=PUW34_19970;product=MFS transporter;protein_id=WJG96617.1;transl_table=11 CP118122.1 Genbank gene 4123726 4124835 . + . ID=gene-PUW34_19975;Name=PUW34_19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19975 CP118122.1 Protein Homology CDS 4123726 4124835 . + 0 ID=cds-WJG96618.1;Parent=gene-PUW34_19975;Dbxref=NCBI_GP:WJG96618.1;Name=WJG96618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=PUW34_19975;product=glycerol dehydrogenase;protein_id=WJG96618.1;transl_table=11 CP118122.1 Genbank gene 4124993 4126489 . + . ID=gene-PUW34_19980;Name=PUW34_19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19980 CP118122.1 Protein Homology CDS 4124993 4126489 . + 0 ID=cds-WJG96619.1;Parent=gene-PUW34_19980;Dbxref=NCBI_GP:WJG96619.1;Name=WJG96619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=PUW34_19980;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WJG96619.1;transl_table=11 CP118122.1 Genbank gene 4126499 4127044 . + . ID=gene-PUW34_19985;Name=PUW34_19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_19985 CP118122.1 Protein Homology CDS 4126499 4127044 . + 0 ID=cds-WJG96620.1;Parent=gene-PUW34_19985;Dbxref=NCBI_GP:WJG96620.1;Name=WJG96620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=PUW34_19985;product=hypothetical protein;protein_id=WJG96620.1;transl_table=11 CP118122.1 Genbank gene 4127091 4128599 . - . ID=gene-PUW34_19990;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=PUW34_19990 CP118122.1 Protein Homology CDS 4127091 4128599 . - 0 ID=cds-WJG96621.1;Parent=gene-PUW34_19990;Dbxref=NCBI_GP:WJG96621.1;Name=WJG96621.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=PUW34_19990;product=glycerol-3-phosphate dehydrogenase;protein_id=WJG96621.1;transl_table=11 CP118122.1 Genbank gene 4128798 4129124 . + . ID=gene-PUW34_19995;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=PUW34_19995 CP118122.1 Protein Homology CDS 4128798 4129124 . + 0 ID=cds-WJG96622.1;Parent=gene-PUW34_19995;Dbxref=NCBI_GP:WJG96622.1;Name=WJG96622.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=PUW34_19995;product=thiosulfate sulfurtransferase GlpE;protein_id=WJG96622.1;transl_table=11 CP118122.1 Genbank gene 4129200 4130030 . + . ID=gene-PUW34_20000;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=PUW34_20000 CP118122.1 Protein Homology CDS 4129200 4130030 . + 0 ID=cds-WJG96623.1;Parent=gene-PUW34_20000;Dbxref=NCBI_GP:WJG96623.1;Name=WJG96623.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=PUW34_20000;product=rhomboid family intramembrane serine protease GlpG;protein_id=WJG96623.1;transl_table=11 CP118122.1 Genbank gene 4130124 4130882 . + . ID=gene-PUW34_20005;Name=PUW34_20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20005 CP118122.1 Protein Homology CDS 4130124 4130882 . + 0 ID=cds-WJG96624.1;Parent=gene-PUW34_20005;Dbxref=NCBI_GP:WJG96624.1;Name=WJG96624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=PUW34_20005;product=DeoR/GlpR family transcriptional regulator;protein_id=WJG96624.1;transl_table=11 CP118122.1 Genbank gene 4130879 4132462 . - . ID=gene-PUW34_20010;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=PUW34_20010 CP118122.1 Protein Homology CDS 4130879 4132462 . - 0 ID=cds-WJG96625.1;Parent=gene-PUW34_20010;Dbxref=NCBI_GP:WJG96625.1;Name=WJG96625.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=PUW34_20010;product=RNA repair transcriptional activator RtcR;protein_id=WJG96625.1;transl_table=11 CP118122.1 Genbank gene 4132652 4134205 . + . ID=gene-PUW34_20015;Name=PUW34_20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20015 CP118122.1 Protein Homology CDS 4132652 4134205 . + 0 ID=cds-WJG96626.1;Parent=gene-PUW34_20015;Dbxref=NCBI_GP:WJG96626.1;Name=WJG96626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=PUW34_20015;product=TROVE domain-containing protein;protein_id=WJG96626.1;transl_table=11 CP118122.1 Genbank gene 4134552 4135766 . + . ID=gene-PUW34_20020;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=PUW34_20020 CP118122.1 Protein Homology CDS 4134552 4135766 . + 0 ID=cds-WJG99053.1;Parent=gene-PUW34_20020;Dbxref=NCBI_GP:WJG99053.1;Name=WJG99053.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=PUW34_20020;product=RNA-splicing ligase RtcB;protein_id=WJG99053.1;transl_table=11 CP118122.1 Genbank gene 4135770 4136789 . + . ID=gene-PUW34_20025;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=PUW34_20025 CP118122.1 Protein Homology CDS 4135770 4136789 . + 0 ID=cds-WJG96627.1;Parent=gene-PUW34_20025;Dbxref=NCBI_GP:WJG96627.1;Name=WJG96627.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462421.1;locus_tag=PUW34_20025;product=RNA 3'-terminal phosphate cyclase;protein_id=WJG96627.1;transl_table=11 CP118122.1 Genbank gene 4136898 4137158 . + . ID=gene-PUW34_20030;Name=PUW34_20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20030 CP118122.1 Protein Homology CDS 4136898 4137158 . + 0 ID=cds-WJG96628.1;Parent=gene-PUW34_20030;Dbxref=NCBI_GP:WJG96628.1;Name=WJG96628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462420.1;locus_tag=PUW34_20030;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WJG96628.1;transl_table=11 CP118122.1 Genbank gene 4137161 4137436 . + . ID=gene-PUW34_20035;Name=PUW34_20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20035 CP118122.1 Protein Homology CDS 4137161 4137436 . + 0 ID=cds-WJG96629.1;Parent=gene-PUW34_20035;Dbxref=NCBI_GP:WJG96629.1;Name=WJG96629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462419.1;locus_tag=PUW34_20035;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WJG96629.1;transl_table=11 CP118122.1 Genbank pseudogene 4137524 4140228 . - . ID=gene-PUW34_20040;Name=malT;gbkey=Gene;gene=malT;gene_biotype=pseudogene;locus_tag=PUW34_20040;pseudo=true CP118122.1 Protein Homology CDS 4137524 4140228 . - 0 ID=cds-PUW34_20040;Parent=gene-PUW34_20040;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=PUW34_20040;product=HTH-type transcriptional regulator MalT;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4140822 4143215 . + . ID=gene-PUW34_20045;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=PUW34_20045 CP118122.1 Protein Homology CDS 4140822 4143215 . + 0 ID=cds-WJG96630.1;Parent=gene-PUW34_20045;Dbxref=NCBI_GP:WJG96630.1;Name=WJG96630.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=PUW34_20045;product=maltodextrin phosphorylase;protein_id=WJG96630.1;transl_table=11 CP118122.1 Genbank gene 4143225 4145303 . + . ID=gene-PUW34_20050;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=PUW34_20050 CP118122.1 Protein Homology CDS 4143225 4145303 . + 0 ID=cds-WJG96631.1;Parent=gene-PUW34_20050;Dbxref=NCBI_GP:WJG96631.1;Name=WJG96631.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=PUW34_20050;product=4-alpha-glucanotransferase;protein_id=WJG96631.1;transl_table=11 CP118122.1 Genbank pseudogene 4145422 4146737 . - . ID=gene-PUW34_20055;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=pseudogene;locus_tag=PUW34_20055;pseudo=true CP118122.1 Protein Homology CDS 4145422 4146737 . - 0 ID=cds-PUW34_20055;Parent=gene-PUW34_20055;Note=frameshifted;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=PUW34_20055;product=gluconate transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4147114 4147689 . - . ID=gene-PUW34_20060;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=PUW34_20060 CP118122.1 Protein Homology CDS 4147114 4147689 . - 0 ID=cds-WJG96632.1;Parent=gene-PUW34_20060;Dbxref=NCBI_GP:WJG96632.1;Name=WJG96632.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=PUW34_20060;product=Fe-S biogenesis protein NfuA;protein_id=WJG96632.1;transl_table=11 CP118122.1 Genbank gene 4147748 4148431 . - . ID=gene-PUW34_20065;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=PUW34_20065 CP118122.1 Protein Homology CDS 4147748 4148431 . - 0 ID=cds-WJG96633.1;Parent=gene-PUW34_20065;Dbxref=NCBI_GP:WJG96633.1;Name=WJG96633.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=PUW34_20065;product=DNA utilization protein GntX;protein_id=WJG96633.1;transl_table=11 CP118122.1 Genbank gene 4148469 4149239 . + . ID=gene-PUW34_20070;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=PUW34_20070 CP118122.1 Protein Homology CDS 4148469 4149239 . + 0 ID=cds-WJG96634.1;Parent=gene-PUW34_20070;Dbxref=NCBI_GP:WJG96634.1;Name=WJG96634.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=PUW34_20070;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WJG96634.1;transl_table=11 CP118122.1 Genbank gene 4149275 4150201 . - . ID=gene-PUW34_20075;Name=PUW34_20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20075 CP118122.1 Protein Homology CDS 4149275 4150201 . - 0 ID=cds-WJG96635.1;Parent=gene-PUW34_20075;Dbxref=NCBI_GP:WJG96635.1;Name=WJG96635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=PUW34_20075;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG96635.1;transl_table=11 CP118122.1 Genbank gene 4150436 4150672 . - . ID=gene-PUW34_20080;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=PUW34_20080 CP118122.1 Protein Homology CDS 4150436 4150672 . - 0 ID=cds-WJG96636.1;Parent=gene-PUW34_20080;Dbxref=NCBI_GP:WJG96636.1;Name=WJG96636.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=PUW34_20080;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WJG96636.1;transl_table=11 CP118122.1 Genbank gene 4150685 4153003 . - . ID=gene-PUW34_20085;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=PUW34_20085 CP118122.1 Protein Homology CDS 4150685 4153003 . - 0 ID=cds-WJG96637.1;Parent=gene-PUW34_20085;Dbxref=NCBI_GP:WJG96637.1;Name=WJG96637.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=PUW34_20085;product=Fe(2+) transporter permease subunit FeoB;protein_id=WJG96637.1;transl_table=11 CP118122.1 Genbank gene 4153022 4153249 . - . ID=gene-PUW34_20090;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=PUW34_20090 CP118122.1 Protein Homology CDS 4153022 4153249 . - 0 ID=cds-WJG96638.1;Parent=gene-PUW34_20090;Dbxref=NCBI_GP:WJG96638.1;Name=WJG96638.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=PUW34_20090;product=ferrous iron transporter A;protein_id=WJG96638.1;transl_table=11 CP118122.1 Genbank gene 4153686 4156016 . - . ID=gene-PUW34_20095;Name=PUW34_20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20095 CP118122.1 Protein Homology CDS 4153686 4156016 . - 0 ID=cds-WJG96639.1;Parent=gene-PUW34_20095;Dbxref=NCBI_GP:WJG96639.1;Name=WJG96639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=PUW34_20095;product=Tex family protein;protein_id=WJG96639.1;transl_table=11 CP118122.1 Genbank gene 4156115 4156588 . - . ID=gene-PUW34_20100;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=PUW34_20100 CP118122.1 Protein Homology CDS 4156115 4156588 . - 0 ID=cds-WJG96640.1;Parent=gene-PUW34_20100;Dbxref=NCBI_GP:WJG96640.1;Name=WJG96640.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=PUW34_20100;product=transcription elongation factor GreB;protein_id=WJG96640.1;transl_table=11 CP118122.1 Genbank gene 4156814 4157248 . + . ID=gene-PUW34_20105;Name=PUW34_20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20105 CP118122.1 Protein Homology CDS 4156814 4157248 . + 0 ID=cds-WJG96641.1;Parent=gene-PUW34_20105;Dbxref=NCBI_GP:WJG96641.1;Name=WJG96641.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PUW34_20105;product=response regulator;protein_id=WJG96641.1;transl_table=11 CP118122.1 Genbank gene 4157266 4157532 . + . ID=gene-PUW34_20110;Name=PUW34_20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20110 CP118122.1 Protein Homology CDS 4157266 4157532 . + 0 ID=cds-WJG96642.1;Parent=gene-PUW34_20110;Dbxref=NCBI_GP:WJG96642.1;Name=WJG96642.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002423495.1;locus_tag=PUW34_20110;product=winged helix-turn-helix domain-containing protein;protein_id=WJG96642.1;transl_table=11 CP118122.1 Genbank gene 4157529 4158881 . + . ID=gene-PUW34_20115;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=PUW34_20115 CP118122.1 Protein Homology CDS 4157529 4158881 . + 0 ID=cds-WJG96643.1;Parent=gene-PUW34_20115;Dbxref=NCBI_GP:WJG96643.1;Name=WJG96643.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=PUW34_20115;product=two-component system sensor histidine kinase EnvZ;protein_id=WJG96643.1;transl_table=11 CP118122.1 Genbank pseudogene 4158956 4160574 . - . ID=gene-PUW34_20120;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=pseudogene;locus_tag=PUW34_20120;pseudo=true CP118122.1 Protein Homology CDS 4158956 4160574 . - 0 ID=cds-PUW34_20120;Parent=gene-PUW34_20120;Note=frameshifted;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=PUW34_20120;product=phosphoenolpyruvate carboxykinase (ATP);pseudo=true;transl_table=11 CP118122.1 Genbank gene 4160954 4162663 . + . ID=gene-PUW34_20125;Name=PUW34_20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20125 CP118122.1 Protein Homology CDS 4160954 4162663 . + 0 ID=cds-WJG96644.1;Parent=gene-PUW34_20125;Dbxref=NCBI_GP:WJG96644.1;Name=WJG96644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=PUW34_20125;product=DUF4153 domain-containing protein;protein_id=WJG96644.1;transl_table=11 CP118122.1 Genbank gene 4162772 4163650 . - . ID=gene-PUW34_20130;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=PUW34_20130 CP118122.1 Protein Homology CDS 4162772 4163650 . - 0 ID=cds-WJG96645.1;Parent=gene-PUW34_20130;Dbxref=NCBI_GP:WJG96645.1;Name=WJG96645.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=PUW34_20130;product=Hsp33 family molecular chaperone HslO;protein_id=WJG96645.1;transl_table=11 CP118122.1 Genbank gene 4163675 4164076 . - . ID=gene-PUW34_20135;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=PUW34_20135 CP118122.1 Protein Homology CDS 4163675 4164076 . - 0 ID=cds-WJG96646.1;Parent=gene-PUW34_20135;Dbxref=NCBI_GP:WJG96646.1;Name=WJG96646.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=PUW34_20135;product=ribosome-associated heat shock protein Hsp15;protein_id=WJG96646.1;transl_table=11 CP118122.1 Genbank gene 4164087 4164755 . - . ID=gene-PUW34_20140;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=PUW34_20140 CP118122.1 Protein Homology CDS 4164087 4164755 . - 0 ID=cds-WJG96647.1;Parent=gene-PUW34_20140;Dbxref=NCBI_GP:WJG96647.1;Name=WJG96647.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=PUW34_20140;product=GMP/IMP nucleotidase;protein_id=WJG96647.1;transl_table=11 CP118122.1 Genbank gene 4164820 4166952 . - . ID=gene-PUW34_20145;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=PUW34_20145 CP118122.1 Protein Homology CDS 4164820 4166952 . - 0 ID=cds-WJG96648.1;Parent=gene-PUW34_20145;Dbxref=NCBI_GP:WJG96648.1;Name=WJG96648.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=PUW34_20145;product=intracellular growth attenuator protein IgaA;protein_id=WJG96648.1;transl_table=11 CP118122.1 Genbank gene 4167275 4167838 . + . ID=gene-PUW34_20150;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=PUW34_20150 CP118122.1 Protein Homology CDS 4167275 4167838 . + 0 ID=cds-WJG96649.1;Parent=gene-PUW34_20150;Dbxref=NCBI_GP:WJG96649.1;Name=WJG96649.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=PUW34_20150;product=ADP compounds hydrolase NudE;protein_id=WJG96649.1;transl_table=11 CP118122.1 Genbank gene 4167934 4170486 . - . ID=gene-PUW34_20155;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=PUW34_20155 CP118122.1 Protein Homology CDS 4167934 4170486 . - 0 ID=cds-WJG96650.1;Parent=gene-PUW34_20155;Dbxref=NCBI_GP:WJG96650.1;Name=WJG96650.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=PUW34_20155;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WJG96650.1;transl_table=11 CP118122.1 Genbank gene 4170607 4171386 . + . ID=gene-PUW34_20160;Name=PUW34_20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20160 CP118122.1 Protein Homology CDS 4170607 4171386 . + 0 ID=cds-WJG96651.1;Parent=gene-PUW34_20160;Dbxref=NCBI_GP:WJG96651.1;Name=WJG96651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=PUW34_20160;product=DNA utilization protein HofM;protein_id=WJG96651.1;transl_table=11 CP118122.1 Genbank gene 4171386 4171925 . + . ID=gene-PUW34_20165;Name=PUW34_20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20165 CP118122.1 Protein Homology CDS 4171386 4171925 . + 0 ID=cds-WJG96652.1;Parent=gene-PUW34_20165;Dbxref=NCBI_GP:WJG96652.1;Name=WJG96652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=PUW34_20165;product=PilN domain-containing protein;protein_id=WJG96652.1;transl_table=11 CP118122.1 Genbank gene 4171909 4172382 . + . ID=gene-PUW34_20170;Name=PUW34_20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20170 CP118122.1 Protein Homology CDS 4171909 4172382 . + 0 ID=cds-WJG96653.1;Parent=gene-PUW34_20170;Dbxref=NCBI_GP:WJG96653.1;Name=WJG96653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=PUW34_20170;product=hypothetical protein;protein_id=WJG96653.1;transl_table=11 CP118122.1 Genbank gene 4172372 4172773 . + . ID=gene-PUW34_20175;Name=PUW34_20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20175 CP118122.1 Protein Homology CDS 4172372 4172773 . + 0 ID=cds-WJG96654.1;Parent=gene-PUW34_20175;Dbxref=NCBI_GP:WJG96654.1;Name=WJG96654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=PUW34_20175;product=DUF2531 family protein;protein_id=WJG96654.1;transl_table=11 CP118122.1 Genbank pseudogene 4172688 4173924 . + . ID=gene-PUW34_20180;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=PUW34_20180;pseudo=true CP118122.1 Protein Homology CDS 4172688 4173924 . + 0 ID=cds-PUW34_20180;Parent=gene-PUW34_20180;Note=frameshifted;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=PUW34_20180;product=DNA uptake porin HofQ;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4174388 4174909 . + . ID=gene-PUW34_20185;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=PUW34_20185 CP118122.1 Protein Homology CDS 4174388 4174909 . + 0 ID=cds-WJG96655.1;Parent=gene-PUW34_20185;Dbxref=NCBI_GP:WJG96655.1;Name=WJG96655.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=PUW34_20185;product=shikimate kinase AroK;protein_id=WJG96655.1;transl_table=11 CP118122.1 Genbank gene 4174966 4176054 . + . ID=gene-PUW34_20190;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=PUW34_20190 CP118122.1 Protein Homology CDS 4174966 4176054 . + 0 ID=cds-WJG96656.1;Parent=gene-PUW34_20190;Dbxref=NCBI_GP:WJG96656.1;Name=WJG96656.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=PUW34_20190;product=3-dehydroquinate synthase;protein_id=WJG96656.1;transl_table=11 CP118122.1 Genbank gene 4176152 4177429 . + . ID=gene-PUW34_20195;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=PUW34_20195 CP118122.1 Protein Homology CDS 4176152 4177429 . + 0 ID=cds-WJG96657.1;Parent=gene-PUW34_20195;Dbxref=NCBI_GP:WJG96657.1;Name=WJG96657.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=PUW34_20195;product=cell division protein DamX;protein_id=WJG96657.1;transl_table=11 CP118122.1 Genbank pseudogene 4177612 4178445 . + . ID=gene-PUW34_20200;Name=dam;gbkey=Gene;gene=dam;gene_biotype=pseudogene;locus_tag=PUW34_20200;pseudo=true CP118122.1 Protein Homology CDS 4177612 4178445 . + 0 ID=cds-PUW34_20200;Parent=gene-PUW34_20200;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=PUW34_20200;product=adenine-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4178463 4179140 . + . ID=gene-PUW34_20205;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=PUW34_20205 CP118122.1 Protein Homology CDS 4178463 4179140 . + 0 ID=cds-WJG96658.1;Parent=gene-PUW34_20205;Dbxref=NCBI_GP:WJG96658.1;Name=WJG96658.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=PUW34_20205;product=ribulose-phosphate 3-epimerase;protein_id=WJG96658.1;transl_table=11 CP118122.1 Genbank gene 4179133 4179891 . + . ID=gene-PUW34_20210;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=PUW34_20210 CP118122.1 Protein Homology CDS 4179133 4179891 . + 0 ID=cds-WJG96659.1;Parent=gene-PUW34_20210;Dbxref=NCBI_GP:WJG96659.1;Name=WJG96659.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=PUW34_20210;product=phosphoglycolate phosphatase;protein_id=WJG96659.1;transl_table=11 CP118122.1 Genbank gene 4179884 4180888 . + . ID=gene-PUW34_20215;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PUW34_20215 CP118122.1 Protein Homology CDS 4179884 4180888 . + 0 ID=cds-WJG96660.1;Parent=gene-PUW34_20215;Dbxref=NCBI_GP:WJG96660.1;Name=WJG96660.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=PUW34_20215;product=tryptophan--tRNA ligase;protein_id=WJG96660.1;transl_table=11 CP118122.1 Genbank gene 4181031 4181201 . - . ID=gene-PUW34_20220;Name=PUW34_20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20220 CP118122.1 Protein Homology CDS 4181031 4181201 . - 0 ID=cds-WJG96661.1;Parent=gene-PUW34_20220;Dbxref=NCBI_GP:WJG96661.1;Name=WJG96661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=PUW34_20220;product=YhfL family protein;protein_id=WJG96661.1;transl_table=11 CP118122.1 Genbank pseudogene 4181394 4187166 . - . ID=gene-PUW34_20225;Name=bigA;gbkey=Gene;gene=bigA;gene_biotype=pseudogene;locus_tag=PUW34_20225;pseudo=true CP118122.1 Protein Homology CDS 4181394 4187166 . - 0 ID=cds-PUW34_20225;Parent=gene-PUW34_20225;Note=frameshifted;gbkey=CDS;gene=bigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=PUW34_20225;product=autotransporter adhesin BigA;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4187495 4188867 . - . ID=gene-PUW34_20230;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=pseudogene;locus_tag=PUW34_20230;pseudo=true CP118122.1 Protein Homology CDS 4187495 4188867 . - 0 ID=cds-PUW34_20230;Parent=gene-PUW34_20230;Note=frameshifted;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=PUW34_20230;product=siroheme synthase CysG;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4188879 4189688 . - . ID=gene-PUW34_20235;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=PUW34_20235 CP118122.1 Protein Homology CDS 4188879 4189688 . - 0 ID=cds-WJG96662.1;Parent=gene-PUW34_20235;Dbxref=NCBI_GP:WJG96662.1;Name=WJG96662.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442185.1;locus_tag=PUW34_20235;product=nitrite transporter NirC;protein_id=WJG96662.1;transl_table=11 CP118122.1 Genbank gene 4189883 4190209 . - . ID=gene-PUW34_20240;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=PUW34_20240 CP118122.1 Protein Homology CDS 4189883 4190209 . - 0 ID=cds-WJG96663.1;Parent=gene-PUW34_20240;Dbxref=NCBI_GP:WJG96663.1;Name=WJG96663.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=PUW34_20240;product=nitrite reductase small subunit NirD;protein_id=WJG96663.1;transl_table=11 CP118122.1 Genbank gene 4190206 4192749 . - . ID=gene-PUW34_20245;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=PUW34_20245 CP118122.1 Protein Homology CDS 4190206 4192749 . - 0 ID=cds-WJG96664.1;Parent=gene-PUW34_20245;Dbxref=NCBI_GP:WJG96664.1;Name=WJG96664.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=PUW34_20245;product=NADPH-nitrite reductase large subunit;protein_id=WJG96664.1;transl_table=11 CP118122.1 Genbank gene 4193012 4194193 . - . ID=gene-PUW34_20250;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=PUW34_20250 CP118122.1 Protein Homology CDS 4193012 4194193 . - 0 ID=cds-WJG96665.1;Parent=gene-PUW34_20250;Dbxref=NCBI_GP:WJG96665.1;Name=WJG96665.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=PUW34_20250;product=MFS transporter TsgA;protein_id=WJG96665.1;transl_table=11 CP118122.1 Genbank gene 4194470 4195042 . + . ID=gene-PUW34_20255;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=PUW34_20255 CP118122.1 Protein Homology CDS 4194470 4195042 . + 0 ID=cds-WJG96666.1;Parent=gene-PUW34_20255;Dbxref=NCBI_GP:WJG96666.1;Name=WJG96666.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=PUW34_20255;product=peptidylprolyl isomerase A;protein_id=WJG96666.1;transl_table=11 CP118122.1 Genbank gene 4195151 4195318 . + . ID=gene-PUW34_20260;Name=PUW34_20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20260 CP118122.1 Protein Homology CDS 4195151 4195318 . + 0 ID=cds-WJG96667.1;Parent=gene-PUW34_20260;Dbxref=NCBI_GP:WJG96667.1;Name=WJG96667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=PUW34_20260;product=YhfG family protein;protein_id=WJG96667.1;transl_table=11 CP118122.1 Genbank gene 4195308 4195910 . + . ID=gene-PUW34_20265;Name=PUW34_20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20265 CP118122.1 Protein Homology CDS 4195308 4195910 . + 0 ID=cds-WJG96668.1;Parent=gene-PUW34_20265;Dbxref=NCBI_GP:WJG96668.1;Name=WJG96668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=PUW34_20265;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WJG96668.1;transl_table=11 CP118122.1 Genbank gene 4195942 4196505 . + . ID=gene-PUW34_20270;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=PUW34_20270 CP118122.1 Protein Homology CDS 4195942 4196505 . + 0 ID=cds-WJG96669.1;Parent=gene-PUW34_20270;Dbxref=NCBI_GP:WJG96669.1;Name=WJG96669.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=PUW34_20270;product=aminodeoxychorismate synthase component 2;protein_id=WJG96669.1;transl_table=11 CP118122.1 Genbank gene 4196591 4197808 . + . ID=gene-PUW34_20275;Name=PUW34_20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20275 CP118122.1 Protein Homology CDS 4196591 4197808 . + 0 ID=cds-WJG96670.1;Parent=gene-PUW34_20275;Dbxref=NCBI_GP:WJG96670.1;Name=WJG96670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=PUW34_20275;product=aspartate aminotransferase family protein;protein_id=WJG96670.1;transl_table=11 CP118122.1 Genbank gene 4197851 4199938 . - . ID=gene-PUW34_20280;Name=PUW34_20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20280 CP118122.1 Protein Homology CDS 4197851 4199938 . - 0 ID=cds-WJG99054.1;Parent=gene-PUW34_20280;Dbxref=NCBI_GP:WJG99054.1;Name=WJG99054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=PUW34_20280;product=YccS/YhfK family putative transporter;protein_id=WJG99054.1;transl_table=11 CP118122.1 Genbank gene 4199987 4200619 . - . ID=gene-PUW34_20285;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=PUW34_20285 CP118122.1 Protein Homology CDS 4199987 4200619 . - 0 ID=cds-WJG96671.1;Parent=gene-PUW34_20285;Dbxref=NCBI_GP:WJG96671.1;Name=WJG96671.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=PUW34_20285;product=cAMP-activated global transcriptional regulator CRP;protein_id=WJG96671.1;transl_table=11 CP118122.1 Genbank gene 4200927 4201331 . + . ID=gene-PUW34_20290;Name=PUW34_20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20290 CP118122.1 Protein Homology CDS 4200927 4201331 . + 0 ID=cds-WJG96672.1;Parent=gene-PUW34_20290;Dbxref=NCBI_GP:WJG96672.1;Name=WJG96672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=PUW34_20290;product=OsmC family protein;protein_id=WJG96672.1;transl_table=11 CP118122.1 Genbank gene 4201368 4202297 . - . ID=gene-PUW34_20295;Name=PUW34_20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20295 CP118122.1 Protein Homology CDS 4201368 4202297 . - 0 ID=cds-WJG96673.1;Parent=gene-PUW34_20295;Dbxref=NCBI_GP:WJG96673.1;Name=WJG96673.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274691.1;locus_tag=PUW34_20295;product=phosphoribulokinase;protein_id=WJG96673.1;transl_table=11 CP118122.1 Genbank pseudogene 4202348 4202565 . - . ID=gene-PUW34_20300;Name=PUW34_20300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_20300;pseudo=true CP118122.1 Protein Homology CDS 4202348 4202565 . - 0 ID=cds-PUW34_20300;Parent=gene-PUW34_20300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=PUW34_20300;product=YheU family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4202562 4203629 . - . ID=gene-PUW34_20305;Name=PUW34_20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20305 CP118122.1 Protein Homology CDS 4202562 4203629 . - 0 ID=cds-WJG96674.1;Parent=gene-PUW34_20305;Dbxref=NCBI_GP:WJG96674.1;Name=WJG96674.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=PUW34_20305;product=hydrolase;protein_id=WJG96674.1;transl_table=11 CP118122.1 Genbank gene 4203827 4204138 . + . ID=gene-PUW34_20310;Name=PUW34_20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20310 CP118122.1 Protein Homology CDS 4203827 4204138 . + 0 ID=cds-WJG96675.1;Parent=gene-PUW34_20310;Dbxref=NCBI_GP:WJG96675.1;Name=WJG96675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=PUW34_20310;product=monooxygenase;protein_id=WJG96675.1;transl_table=11 CP118122.1 Genbank gene 4204140 4204361 . - . ID=gene-PUW34_20315;Name=PUW34_20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20315 CP118122.1 Protein Homology CDS 4204140 4204361 . - 0 ID=cds-WJG96676.1;Parent=gene-PUW34_20315;Dbxref=NCBI_GP:WJG96676.1;Name=WJG96676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=PUW34_20315;product=LysR family transcriptional regulator;protein_id=WJG96676.1;transl_table=11 CP118122.1 Genbank gene 4204524 4206431 . - . ID=gene-PUW34_20320;Name=PUW34_20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20320 CP118122.1 Protein Homology CDS 4204524 4206431 . - 0 ID=cds-WJG96677.1;Parent=gene-PUW34_20320;Dbxref=NCBI_GP:WJG96677.1;Name=WJG96677.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=PUW34_20320;product=ABC transporter ATP-binding protein;protein_id=WJG96677.1;transl_table=11 CP118122.1 Genbank gene 4206697 4207248 . + . ID=gene-PUW34_20325;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=PUW34_20325 CP118122.1 Protein Homology CDS 4206697 4207248 . + 0 ID=cds-WJG96678.1;Parent=gene-PUW34_20325;Dbxref=NCBI_GP:WJG96678.1;Name=WJG96678.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=PUW34_20325;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WJG96678.1;transl_table=11 CP118122.1 Genbank pseudogene 4207248 4209054 . + . ID=gene-PUW34_20330;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=pseudogene;locus_tag=PUW34_20330;pseudo=true CP118122.1 Protein Homology CDS 4207248 4209054 . + 0 ID=cds-PUW34_20330;Parent=gene-PUW34_20330;Note=frameshifted;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=PUW34_20330;product=glutathione-regulated potassium-efflux system protein KefB;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4209064 4209264 . + . ID=gene-PUW34_20335;Name=PUW34_20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20335 CP118122.1 Protein Homology CDS 4209064 4209264 . + 0 ID=cds-WJG96679.1;Parent=gene-PUW34_20335;Dbxref=NCBI_GP:WJG96679.1;Name=WJG96679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=PUW34_20335;product=YheV family putative zinc ribbon protein;protein_id=WJG96679.1;transl_table=11 CP118122.1 Genbank gene 4209359 4209949 . + . ID=gene-PUW34_20340;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=PUW34_20340 CP118122.1 Protein Homology CDS 4209359 4209949 . + 0 ID=cds-WJG96680.1;Parent=gene-PUW34_20340;Dbxref=NCBI_GP:WJG96680.1;Name=WJG96680.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=PUW34_20340;product=peptidylprolyl isomerase;protein_id=WJG96680.1;transl_table=11 CP118122.1 Genbank gene 4210138 4210356 . - . ID=gene-PUW34_20345;Name=PUW34_20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20345 CP118122.1 Protein Homology CDS 4210138 4210356 . - 0 ID=cds-WJG96681.1;Parent=gene-PUW34_20345;Dbxref=NCBI_GP:WJG96681.1;Name=WJG96681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=PUW34_20345;product=SlyX family protein;protein_id=WJG96681.1;transl_table=11 CP118122.1 Genbank gene 4210576 4211394 . + . ID=gene-PUW34_20350;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=PUW34_20350 CP118122.1 Protein Homology CDS 4210576 4211394 . + 0 ID=cds-WJG96682.1;Parent=gene-PUW34_20350;Dbxref=NCBI_GP:WJG96682.1;Name=WJG96682.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=PUW34_20350;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJG96682.1;transl_table=11 CP118122.1 Genbank gene 4211670 4212392 . + . ID=gene-PUW34_20355;Name=PUW34_20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20355 CP118122.1 Protein Homology CDS 4211670 4212392 . + 0 ID=cds-WJG96683.1;Parent=gene-PUW34_20355;Dbxref=NCBI_GP:WJG96683.1;Name=WJG96683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=PUW34_20355;product=transcriptional regulator;protein_id=WJG96683.1;transl_table=11 CP118122.1 Genbank gene 4212392 4212778 . + . ID=gene-PUW34_20360;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=PUW34_20360 CP118122.1 Protein Homology CDS 4212392 4212778 . + 0 ID=cds-WJG96684.1;Parent=gene-PUW34_20360;Dbxref=NCBI_GP:WJG96684.1;Name=WJG96684.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=PUW34_20360;product=sulfurtransferase complex subunit TusD;protein_id=WJG96684.1;transl_table=11 CP118122.1 Genbank gene 4212778 4213134 . + . ID=gene-PUW34_20365;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=PUW34_20365 CP118122.1 Protein Homology CDS 4212778 4213134 . + 0 ID=cds-WJG96685.1;Parent=gene-PUW34_20365;Dbxref=NCBI_GP:WJG96685.1;Name=WJG96685.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=PUW34_20365;product=sulfurtransferase complex subunit TusC;protein_id=WJG96685.1;transl_table=11 CP118122.1 Genbank gene 4213142 4213429 . + . ID=gene-PUW34_20370;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=PUW34_20370 CP118122.1 Protein Homology CDS 4213142 4213429 . + 0 ID=cds-WJG96686.1;Parent=gene-PUW34_20370;Dbxref=NCBI_GP:WJG96686.1;Name=WJG96686.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=PUW34_20370;product=sulfurtransferase complex subunit TusB;protein_id=WJG96686.1;transl_table=11 CP118122.1 Genbank gene 4213555 4213929 . + . ID=gene-PUW34_20375;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=PUW34_20375 CP118122.1 Protein Homology CDS 4213555 4213929 . + 0 ID=cds-WJG96687.1;Parent=gene-PUW34_20375;Dbxref=NCBI_GP:WJG96687.1;Name=WJG96687.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=PUW34_20375;product=30S ribosomal protein S12;protein_id=WJG96687.1;transl_table=11 CP118122.1 Genbank gene 4214025 4214495 . + . ID=gene-PUW34_20380;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=PUW34_20380 CP118122.1 Protein Homology CDS 4214025 4214495 . + 0 ID=cds-WJG96688.1;Parent=gene-PUW34_20380;Dbxref=NCBI_GP:WJG96688.1;Name=WJG96688.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=PUW34_20380;product=30S ribosomal protein S7;protein_id=WJG96688.1;transl_table=11 CP118122.1 Genbank gene 4214592 4216706 . + . ID=gene-PUW34_20385;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=PUW34_20385 CP118122.1 Protein Homology CDS 4214592 4216706 . + 0 ID=cds-WJG96689.1;Parent=gene-PUW34_20385;Dbxref=NCBI_GP:WJG96689.1;Name=WJG96689.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=PUW34_20385;product=elongation factor G;protein_id=WJG96689.1;transl_table=11 CP118122.1 Genbank gene 4216778 4217962 . + . ID=gene-PUW34_20390;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PUW34_20390 CP118122.1 Protein Homology CDS 4216778 4217962 . + 0 ID=cds-WJG96690.1;Parent=gene-PUW34_20390;Dbxref=NCBI_GP:WJG96690.1;Name=WJG96690.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PUW34_20390;product=elongation factor Tu;protein_id=WJG96690.1;transl_table=11 CP118122.1 Genbank gene 4218147 4218341 . + . ID=gene-PUW34_20395;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=PUW34_20395 CP118122.1 Protein Homology CDS 4218147 4218341 . + 0 ID=cds-WJG96691.1;Parent=gene-PUW34_20395;Dbxref=NCBI_GP:WJG96691.1;Name=WJG96691.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=PUW34_20395;product=bacterioferritin-associated ferredoxin;protein_id=WJG96691.1;transl_table=11 CP118122.1 Genbank gene 4218414 4218890 . + . ID=gene-PUW34_20400;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=PUW34_20400 CP118122.1 Protein Homology CDS 4218414 4218890 . + 0 ID=cds-WJG96692.1;Parent=gene-PUW34_20400;Dbxref=NCBI_GP:WJG96692.1;Name=WJG96692.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=PUW34_20400;product=bacterioferritin;protein_id=WJG96692.1;transl_table=11 CP118122.1 Genbank gene 4218887 4219354 . - . ID=gene-PUW34_20405;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=PUW34_20405 CP118122.1 Protein Homology CDS 4218887 4219354 . - 0 ID=cds-WJG96693.1;Parent=gene-PUW34_20405;Dbxref=NCBI_GP:WJG96693.1;Name=WJG96693.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=PUW34_20405;product=leader peptidase HopD;protein_id=WJG96693.1;transl_table=11 CP118122.1 Genbank gene 4219734 4220045 . + . ID=gene-PUW34_20410;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=PUW34_20410 CP118122.1 Protein Homology CDS 4219734 4220045 . + 0 ID=cds-WJG96694.1;Parent=gene-PUW34_20410;Dbxref=NCBI_GP:WJG96694.1;Name=WJG96694.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=PUW34_20410;product=30S ribosomal protein S10;protein_id=WJG96694.1;transl_table=11 CP118122.1 Genbank gene 4220078 4220707 . + . ID=gene-PUW34_20415;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=PUW34_20415 CP118122.1 Protein Homology CDS 4220078 4220707 . + 0 ID=cds-WJG96695.1;Parent=gene-PUW34_20415;Dbxref=NCBI_GP:WJG96695.1;Name=WJG96695.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=PUW34_20415;product=50S ribosomal protein L3;protein_id=WJG96695.1;transl_table=11 CP118122.1 Genbank gene 4220718 4221323 . + . ID=gene-PUW34_20420;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=PUW34_20420 CP118122.1 Protein Homology CDS 4220718 4221323 . + 0 ID=cds-WJG96696.1;Parent=gene-PUW34_20420;Dbxref=NCBI_GP:WJG96696.1;Name=WJG96696.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=PUW34_20420;product=50S ribosomal protein L4;protein_id=WJG96696.1;transl_table=11 CP118122.1 Genbank gene 4221320 4221622 . + . ID=gene-PUW34_20425;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=PUW34_20425 CP118122.1 Protein Homology CDS 4221320 4221622 . + 0 ID=cds-WJG96697.1;Parent=gene-PUW34_20425;Dbxref=NCBI_GP:WJG96697.1;Name=WJG96697.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=PUW34_20425;product=50S ribosomal protein L23;protein_id=WJG96697.1;transl_table=11 CP118122.1 Genbank gene 4221640 4222461 . + . ID=gene-PUW34_20430;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=PUW34_20430 CP118122.1 Protein Homology CDS 4221640 4222461 . + 0 ID=cds-WJG96698.1;Parent=gene-PUW34_20430;Dbxref=NCBI_GP:WJG96698.1;Name=WJG96698.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=PUW34_20430;product=50S ribosomal protein L2;protein_id=WJG96698.1;transl_table=11 CP118122.1 Genbank gene 4222478 4222756 . + . ID=gene-PUW34_20435;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=PUW34_20435 CP118122.1 Protein Homology CDS 4222478 4222756 . + 0 ID=cds-WJG96699.1;Parent=gene-PUW34_20435;Dbxref=NCBI_GP:WJG96699.1;Name=WJG96699.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=PUW34_20435;product=30S ribosomal protein S19;protein_id=WJG96699.1;transl_table=11 CP118122.1 Genbank pseudogene 4222771 4223102 . + . ID=gene-PUW34_20440;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=pseudogene;locus_tag=PUW34_20440;pseudo=true CP118122.1 Protein Homology CDS 4222771 4223102 . + 0 ID=cds-PUW34_20440;Parent=gene-PUW34_20440;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=PUW34_20440;product=50S ribosomal protein L22;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4223120 4223821 . + . ID=gene-PUW34_20445;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=PUW34_20445 CP118122.1 Protein Homology CDS 4223120 4223821 . + 0 ID=cds-WJG96700.1;Parent=gene-PUW34_20445;Dbxref=NCBI_GP:WJG96700.1;Name=WJG96700.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=PUW34_20445;product=30S ribosomal protein S3;protein_id=WJG96700.1;transl_table=11 CP118122.1 Genbank gene 4223834 4224244 . + . ID=gene-PUW34_20450;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=PUW34_20450 CP118122.1 Protein Homology CDS 4223834 4224244 . + 0 ID=cds-WJG96701.1;Parent=gene-PUW34_20450;Dbxref=NCBI_GP:WJG96701.1;Name=WJG96701.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=PUW34_20450;product=50S ribosomal protein L16;protein_id=WJG96701.1;transl_table=11 CP118122.1 Genbank gene 4224244 4224435 . + . ID=gene-PUW34_20455;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=PUW34_20455 CP118122.1 Protein Homology CDS 4224244 4224435 . + 0 ID=cds-WJG96702.1;Parent=gene-PUW34_20455;Dbxref=NCBI_GP:WJG96702.1;Name=WJG96702.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=PUW34_20455;product=50S ribosomal protein L29;protein_id=WJG96702.1;transl_table=11 CP118122.1 Genbank gene 4224435 4224689 . + . ID=gene-PUW34_20460;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=PUW34_20460 CP118122.1 Protein Homology CDS 4224435 4224689 . + 0 ID=cds-WJG96703.1;Parent=gene-PUW34_20460;Dbxref=NCBI_GP:WJG96703.1;Name=WJG96703.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=PUW34_20460;product=30S ribosomal protein S17;protein_id=WJG96703.1;transl_table=11 CP118122.1 Genbank gene 4224853 4225224 . + . ID=gene-PUW34_20465;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=PUW34_20465 CP118122.1 Protein Homology CDS 4224853 4225224 . + 0 ID=cds-WJG96704.1;Parent=gene-PUW34_20465;Dbxref=NCBI_GP:WJG96704.1;Name=WJG96704.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=PUW34_20465;product=50S ribosomal protein L14;protein_id=WJG96704.1;transl_table=11 CP118122.1 Genbank gene 4225235 4225549 . + . ID=gene-PUW34_20470;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=PUW34_20470 CP118122.1 Protein Homology CDS 4225235 4225549 . + 0 ID=cds-WJG96705.1;Parent=gene-PUW34_20470;Dbxref=NCBI_GP:WJG96705.1;Name=WJG96705.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=PUW34_20470;product=50S ribosomal protein L24;protein_id=WJG96705.1;transl_table=11 CP118122.1 Genbank gene 4225564 4226103 . + . ID=gene-PUW34_20475;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=PUW34_20475 CP118122.1 Protein Homology CDS 4225564 4226103 . + 0 ID=cds-WJG96706.1;Parent=gene-PUW34_20475;Dbxref=NCBI_GP:WJG96706.1;Name=WJG96706.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=PUW34_20475;product=50S ribosomal protein L5;protein_id=WJG96706.1;transl_table=11 CP118122.1 Genbank gene 4226118 4226423 . + . ID=gene-PUW34_20480;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=PUW34_20480 CP118122.1 Protein Homology CDS 4226118 4226423 . + 0 ID=cds-WJG96707.1;Parent=gene-PUW34_20480;Dbxref=NCBI_GP:WJG96707.1;Name=WJG96707.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=PUW34_20480;product=30S ribosomal protein S14;protein_id=WJG96707.1;transl_table=11 CP118122.1 Genbank gene 4226457 4226849 . + . ID=gene-PUW34_20485;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=PUW34_20485 CP118122.1 Protein Homology CDS 4226457 4226849 . + 0 ID=cds-WJG96708.1;Parent=gene-PUW34_20485;Dbxref=NCBI_GP:WJG96708.1;Name=WJG96708.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=PUW34_20485;product=30S ribosomal protein S8;protein_id=WJG96708.1;transl_table=11 CP118122.1 Genbank gene 4226862 4227395 . + . ID=gene-PUW34_20490;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=PUW34_20490 CP118122.1 Protein Homology CDS 4226862 4227395 . + 0 ID=cds-WJG96709.1;Parent=gene-PUW34_20490;Dbxref=NCBI_GP:WJG96709.1;Name=WJG96709.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=PUW34_20490;product=50S ribosomal protein L6;protein_id=WJG96709.1;transl_table=11 CP118122.1 Genbank gene 4227405 4227758 . + . ID=gene-PUW34_20495;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=PUW34_20495 CP118122.1 Protein Homology CDS 4227405 4227758 . + 0 ID=cds-WJG96710.1;Parent=gene-PUW34_20495;Dbxref=NCBI_GP:WJG96710.1;Name=WJG96710.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=PUW34_20495;product=50S ribosomal protein L18;protein_id=WJG96710.1;transl_table=11 CP118122.1 Genbank gene 4227773 4228276 . + . ID=gene-PUW34_20500;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=PUW34_20500 CP118122.1 Protein Homology CDS 4227773 4228276 . + 0 ID=cds-WJG96711.1;Parent=gene-PUW34_20500;Dbxref=NCBI_GP:WJG96711.1;Name=WJG96711.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=PUW34_20500;product=30S ribosomal protein S5;protein_id=WJG96711.1;transl_table=11 CP118122.1 Genbank gene 4228280 4228459 . + . ID=gene-PUW34_20505;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=PUW34_20505 CP118122.1 Protein Homology CDS 4228280 4228459 . + 0 ID=cds-WJG96712.1;Parent=gene-PUW34_20505;Dbxref=NCBI_GP:WJG96712.1;Name=WJG96712.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=PUW34_20505;product=50S ribosomal protein L30;protein_id=WJG96712.1;transl_table=11 CP118122.1 Genbank gene 4228463 4228897 . + . ID=gene-PUW34_20510;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=PUW34_20510 CP118122.1 Protein Homology CDS 4228463 4228897 . + 0 ID=cds-WJG96713.1;Parent=gene-PUW34_20510;Dbxref=NCBI_GP:WJG96713.1;Name=WJG96713.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=PUW34_20510;product=50S ribosomal protein L15;protein_id=WJG96713.1;transl_table=11 CP118122.1 Genbank gene 4228905 4230236 . + . ID=gene-PUW34_20515;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=PUW34_20515 CP118122.1 Protein Homology CDS 4228905 4230236 . + 0 ID=cds-WJG96714.1;Parent=gene-PUW34_20515;Dbxref=NCBI_GP:WJG96714.1;Name=WJG96714.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=PUW34_20515;product=preprotein translocase subunit SecY;protein_id=WJG96714.1;transl_table=11 CP118122.1 Genbank gene 4230268 4230384 . + . ID=gene-PUW34_20520;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=PUW34_20520 CP118122.1 Protein Homology CDS 4230268 4230384 . + 0 ID=cds-WJG96715.1;Parent=gene-PUW34_20520;Dbxref=NCBI_GP:WJG96715.1;Name=WJG96715.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=PUW34_20520;product=50S ribosomal protein L36;protein_id=WJG96715.1;transl_table=11 CP118122.1 Genbank gene 4230531 4230887 . + . ID=gene-PUW34_20525;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=PUW34_20525 CP118122.1 Protein Homology CDS 4230531 4230887 . + 0 ID=cds-WJG96716.1;Parent=gene-PUW34_20525;Dbxref=NCBI_GP:WJG96716.1;Name=WJG96716.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=PUW34_20525;product=30S ribosomal protein S13;protein_id=WJG96716.1;transl_table=11 CP118122.1 Genbank gene 4230904 4231293 . + . ID=gene-PUW34_20530;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=PUW34_20530 CP118122.1 Protein Homology CDS 4230904 4231293 . + 0 ID=cds-WJG96717.1;Parent=gene-PUW34_20530;Dbxref=NCBI_GP:WJG96717.1;Name=WJG96717.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=PUW34_20530;product=30S ribosomal protein S11;protein_id=WJG96717.1;transl_table=11 CP118122.1 Genbank gene 4231327 4231947 . + . ID=gene-PUW34_20535;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=PUW34_20535 CP118122.1 Protein Homology CDS 4231327 4231947 . + 0 ID=cds-WJG96718.1;Parent=gene-PUW34_20535;Dbxref=NCBI_GP:WJG96718.1;Name=WJG96718.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=PUW34_20535;product=30S ribosomal protein S4;protein_id=WJG96718.1;transl_table=11 CP118122.1 Genbank gene 4231973 4232962 . + . ID=gene-PUW34_20540;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=PUW34_20540 CP118122.1 Protein Homology CDS 4231973 4232962 . + 0 ID=cds-WJG96719.1;Parent=gene-PUW34_20540;Dbxref=NCBI_GP:WJG96719.1;Name=WJG96719.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=PUW34_20540;product=DNA-directed RNA polymerase subunit alpha;protein_id=WJG96719.1;transl_table=11 CP118122.1 Genbank gene 4233003 4233386 . + . ID=gene-PUW34_20545;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=PUW34_20545 CP118122.1 Protein Homology CDS 4233003 4233386 . + 0 ID=cds-WJG96720.1;Parent=gene-PUW34_20545;Dbxref=NCBI_GP:WJG96720.1;Name=WJG96720.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=PUW34_20545;product=50S ribosomal protein L17;protein_id=WJG96720.1;transl_table=11 CP118122.1 Genbank gene 4233494 4233862 . + . ID=gene-PUW34_20550;Name=PUW34_20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20550 CP118122.1 Protein Homology CDS 4233494 4233862 . + 0 ID=cds-WJG96721.1;Parent=gene-PUW34_20550;Dbxref=NCBI_GP:WJG96721.1;Name=WJG96721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=PUW34_20550;product=DUF1992 domain-containing protein;protein_id=WJG96721.1;transl_table=11 CP118122.1 Genbank gene 4233873 4234298 . + . ID=gene-PUW34_20555;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=PUW34_20555 CP118122.1 Protein Homology CDS 4233873 4234298 . + 0 ID=cds-WJG96722.1;Parent=gene-PUW34_20555;Dbxref=NCBI_GP:WJG96722.1;Name=WJG96722.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=PUW34_20555;product=Zn(2+)-responsive transcriptional regulator;protein_id=WJG96722.1;transl_table=11 CP118122.1 Genbank gene 4234356 4234625 . + . ID=gene-PUW34_20560;Name=PUW34_20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20560 CP118122.1 Protein Homology CDS 4234356 4234625 . + 0 ID=cds-WJG96723.1;Parent=gene-PUW34_20560;Dbxref=NCBI_GP:WJG96723.1;Name=WJG96723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092708.1;locus_tag=PUW34_20560;product=alternative ribosome-rescue factor A;protein_id=WJG96723.1;transl_table=11 CP118122.1 Genbank gene 4234561 4234974 . - . ID=gene-PUW34_20565;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=PUW34_20565 CP118122.1 Protein Homology CDS 4234561 4234974 . - 0 ID=cds-WJG96724.1;Parent=gene-PUW34_20565;Dbxref=NCBI_GP:WJG96724.1;Name=WJG96724.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=PUW34_20565;product=large-conductance mechanosensitive channel protein MscL;protein_id=WJG96724.1;transl_table=11 CP118122.1 Genbank gene 4235116 4236492 . - . ID=gene-PUW34_20570;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=PUW34_20570 CP118122.1 Protein Homology CDS 4235116 4236492 . - 0 ID=cds-WJG96725.1;Parent=gene-PUW34_20570;Dbxref=NCBI_GP:WJG96725.1;Name=WJG96725.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=PUW34_20570;product=Trk system potassium transporter TrkA;protein_id=WJG96725.1;transl_table=11 CP118122.1 Genbank gene 4236514 4237803 . - . ID=gene-PUW34_20575;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=PUW34_20575 CP118122.1 Protein Homology CDS 4236514 4237803 . - 0 ID=cds-WJG96726.1;Parent=gene-PUW34_20575;Dbxref=NCBI_GP:WJG96726.1;Name=WJG96726.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=PUW34_20575;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WJG96726.1;transl_table=11 CP118122.1 Genbank gene 4237855 4238802 . - . ID=gene-PUW34_20580;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=PUW34_20580 CP118122.1 Protein Homology CDS 4237855 4238802 . - 0 ID=cds-WJG96727.1;Parent=gene-PUW34_20580;Dbxref=NCBI_GP:WJG96727.1;Name=WJG96727.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=PUW34_20580;product=methionyl-tRNA formyltransferase;protein_id=WJG96727.1;transl_table=11 CP118122.1 Genbank gene 4238818 4239327 . - . ID=gene-PUW34_20585;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=PUW34_20585 CP118122.1 Protein Homology CDS 4238818 4239327 . - 0 ID=cds-WJG96728.1;Parent=gene-PUW34_20585;Dbxref=NCBI_GP:WJG96728.1;Name=WJG96728.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=PUW34_20585;product=peptide deformylase;protein_id=WJG96728.1;transl_table=11 CP118122.1 Genbank pseudogene 4239459 4240582 . + . ID=gene-PUW34_20590;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=pseudogene;locus_tag=PUW34_20590;pseudo=true CP118122.1 Protein Homology CDS 4239459 4240582 . + 0 ID=cds-PUW34_20590;Parent=gene-PUW34_20590;Note=frameshifted;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=PUW34_20590;product=DNA-protecting protein DprA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4240554 4241027 . + . ID=gene-PUW34_20595;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=PUW34_20595 CP118122.1 Protein Homology CDS 4240554 4241027 . + 0 ID=cds-WJG96729.1;Parent=gene-PUW34_20595;Dbxref=NCBI_GP:WJG96729.1;Name=WJG96729.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=PUW34_20595;product=DUF494 family protein Smg;protein_id=WJG96729.1;transl_table=11 CP118122.1 Genbank gene 4241054 4241596 . + . ID=gene-PUW34_20600;Name=PUW34_20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20600 CP118122.1 Protein Homology CDS 4241054 4241596 . + 0 ID=cds-WJG96730.1;Parent=gene-PUW34_20600;Dbxref=NCBI_GP:WJG96730.1;Name=WJG96730.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=PUW34_20600;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WJG96730.1;transl_table=11 CP118122.1 Genbank gene 4241601 4242173 . + . ID=gene-PUW34_20605;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=PUW34_20605 CP118122.1 Protein Homology CDS 4241601 4242173 . + 0 ID=cds-WJG96731.1;Parent=gene-PUW34_20605;Dbxref=NCBI_GP:WJG96731.1;Name=WJG96731.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=PUW34_20605;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WJG96731.1;transl_table=11 CP118122.1 Genbank gene 4242178 4242996 . + . ID=gene-PUW34_20610;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=PUW34_20610 CP118122.1 Protein Homology CDS 4242178 4242996 . + 0 ID=cds-WJG99055.1;Parent=gene-PUW34_20610;Dbxref=NCBI_GP:WJG99055.1;Name=WJG99055.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=PUW34_20610;product=shikimate dehydrogenase;protein_id=WJG99055.1;transl_table=11 CP118122.1 Genbank gene 4242993 4243250 . + . ID=gene-PUW34_20615;Name=PUW34_20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20615 CP118122.1 Protein Homology CDS 4242993 4243250 . + 0 ID=cds-WJG96732.1;Parent=gene-PUW34_20615;Dbxref=NCBI_GP:WJG96732.1;Name=WJG96732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=PUW34_20615;product=DUF1488 domain-containing protein;protein_id=WJG96732.1;transl_table=11 CP118122.1 Genbank gene 4243226 4243780 . - . ID=gene-PUW34_20620;Name=PUW34_20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20620 CP118122.1 Protein Homology CDS 4243226 4243780 . - 0 ID=cds-WJG96733.1;Parent=gene-PUW34_20620;Dbxref=NCBI_GP:WJG96733.1;Name=WJG96733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=PUW34_20620;product=gamma carbonic anhydrase family protein;protein_id=WJG96733.1;transl_table=11 CP118122.1 Genbank gene 4244251 4245792 . + . ID=gene-PUW34_20625;Name=PUW34_20625;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_20625 CP118122.1 cmsearch rRNA 4244251 4245792 . + . ID=rna-PUW34_20625;Parent=gene-PUW34_20625;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_20625;product=16S ribosomal RNA CP118122.1 cmsearch exon 4244251 4245792 . + . ID=exon-PUW34_20625-1;Parent=rna-PUW34_20625;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_20625;product=16S ribosomal RNA CP118122.1 Genbank gene 4245878 4245953 . + . ID=gene-PUW34_20630;Name=PUW34_20630;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_20630 CP118122.1 tRNAscan-SE tRNA 4245878 4245953 . + . ID=rna-PUW34_20630;Parent=gene-PUW34_20630;anticodon=(pos:4245912..4245914);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_20630;product=tRNA-Glu CP118122.1 tRNAscan-SE exon 4245878 4245953 . + . ID=exon-PUW34_20630-1;Parent=rna-PUW34_20630;anticodon=(pos:4245912..4245914);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_20630;product=tRNA-Glu CP118122.1 Genbank gene 4246147 4249135 . + . ID=gene-PUW34_20635;Name=PUW34_20635;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW34_20635 CP118122.1 cmsearch rRNA 4246147 4249135 . + . ID=rna-PUW34_20635;Parent=gene-PUW34_20635;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_20635;product=23S ribosomal RNA CP118122.1 cmsearch exon 4246147 4249135 . + . ID=exon-PUW34_20635-1;Parent=rna-PUW34_20635;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_20635;product=23S ribosomal RNA CP118122.1 Genbank gene 4249332 4249447 . + . ID=gene-PUW34_20640;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW34_20640 CP118122.1 cmsearch rRNA 4249332 4249447 . + . ID=rna-PUW34_20640;Parent=gene-PUW34_20640;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_20640;product=5S ribosomal RNA CP118122.1 cmsearch exon 4249332 4249447 . + . ID=exon-PUW34_20640-1;Parent=rna-PUW34_20640;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW34_20640;product=5S ribosomal RNA CP118122.1 Genbank gene 4249613 4250050 . - . ID=gene-PUW34_20645;Name=PUW34_20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20645 CP118122.1 Protein Homology CDS 4249613 4250050 . - 0 ID=cds-WJG96734.1;Parent=gene-PUW34_20645;Dbxref=NCBI_GP:WJG96734.1;Name=WJG96734.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=PUW34_20645;product=acetyltransferase;protein_id=WJG96734.1;transl_table=11 CP118122.1 Genbank gene 4250207 4251136 . + . ID=gene-PUW34_20650;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=PUW34_20650 CP118122.1 Protein Homology CDS 4250207 4251136 . + 0 ID=cds-WJG96735.1;Parent=gene-PUW34_20650;Dbxref=NCBI_GP:WJG96735.1;Name=WJG96735.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=PUW34_20650;product=homoserine O-succinyltransferase;protein_id=WJG96735.1;transl_table=11 CP118122.1 Genbank gene 4251405 4253006 . + . ID=gene-PUW34_20655;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=PUW34_20655 CP118122.1 Protein Homology CDS 4251405 4253006 . + 0 ID=cds-WJG99056.1;Parent=gene-PUW34_20655;Dbxref=NCBI_GP:WJG99056.1;Name=WJG99056.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=PUW34_20655;product=malate synthase A;protein_id=WJG99056.1;transl_table=11 CP118122.1 Genbank gene 4253038 4254342 . + . ID=gene-PUW34_20660;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=PUW34_20660 CP118122.1 Protein Homology CDS 4253038 4254342 . + 0 ID=cds-WJG96736.1;Parent=gene-PUW34_20660;Dbxref=NCBI_GP:WJG96736.1;Name=WJG96736.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=PUW34_20660;product=isocitrate lyase;protein_id=WJG96736.1;transl_table=11 CP118122.1 Genbank gene 4254444 4256195 . + . ID=gene-PUW34_20665;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=PUW34_20665 CP118122.1 Protein Homology CDS 4254444 4256195 . + 0 ID=cds-WJG96737.1;Parent=gene-PUW34_20665;Dbxref=NCBI_GP:WJG96737.1;Name=WJG96737.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=PUW34_20665;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WJG96737.1;transl_table=11 CP118122.1 Genbank gene 4256159 4256566 . - . ID=gene-PUW34_20670;Name=PUW34_20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20670 CP118122.1 Protein Homology CDS 4256159 4256566 . - 0 ID=cds-WJG99057.1;Parent=gene-PUW34_20670;Dbxref=NCBI_GP:WJG99057.1;Name=WJG99057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=PUW34_20670;product=ASCH domain-containing protein;protein_id=WJG99057.1;transl_table=11 CP118122.1 Genbank gene 4256577 4257401 . - . ID=gene-PUW34_20675;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=PUW34_20675 CP118122.1 Protein Homology CDS 4256577 4257401 . - 0 ID=cds-WJG96738.1;Parent=gene-PUW34_20675;Dbxref=NCBI_GP:WJG96738.1;Name=WJG96738.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=PUW34_20675;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WJG96738.1;transl_table=11 CP118122.1 Genbank pseudogene 4257780 4261386 . + . ID=gene-PUW34_20680;Name=metH;gbkey=Gene;gene=metH;gene_biotype=pseudogene;locus_tag=PUW34_20680;pseudo=true CP118122.1 Protein Homology CDS 4257780 4261386 . + 0 ID=cds-PUW34_20680;Parent=gene-PUW34_20680;Note=frameshifted;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: protein motif:HMM:NF013007.2%2CHMM:NF014961.2;locus_tag=PUW34_20680;product=methionine synthase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4261653 4263284 . + . ID=gene-PUW34_20685;Name=PUW34_20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20685 CP118122.1 Protein Homology CDS 4261653 4263284 . + 0 ID=cds-WJG96739.1;Parent=gene-PUW34_20685;Dbxref=NCBI_GP:WJG96739.1;Name=WJG96739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=PUW34_20685;product=Na/Pi cotransporter family protein;protein_id=WJG96739.1;transl_table=11 CP118122.1 Genbank gene 4263344 4264048 . - . ID=gene-PUW34_20690;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=PUW34_20690 CP118122.1 Protein Homology CDS 4263344 4264048 . - 0 ID=cds-WJG96740.1;Parent=gene-PUW34_20690;Dbxref=NCBI_GP:WJG96740.1;Name=WJG96740.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421779.1;locus_tag=PUW34_20690;product=dipeptidase PepE;protein_id=WJG96740.1;transl_table=11 CP118122.1 Genbank gene 4264120 4264221 . + . ID=gene-PUW34_20695;Name=PUW34_20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20695 CP118122.1 Protein Homology CDS 4264120 4264221 . + 0 ID=cds-WJG96741.1;Parent=gene-PUW34_20695;Dbxref=NCBI_GP:WJG96741.1;Name=WJG96741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=PUW34_20695;product=hypothetical protein;protein_id=WJG96741.1;transl_table=11 CP118122.1 Genbank gene 4264256 4264795 . + . ID=gene-PUW34_20700;Name=PUW34_20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20700 CP118122.1 Protein Homology CDS 4264256 4264795 . + 0 ID=cds-WJG96742.1;Parent=gene-PUW34_20700;Dbxref=NCBI_GP:WJG96742.1;Name=WJG96742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=PUW34_20700;product=DUF2058 domain-containing protein;protein_id=WJG96742.1;transl_table=11 CP118122.1 Genbank gene 4264842 4265711 . + . ID=gene-PUW34_20705;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=PUW34_20705 CP118122.1 Protein Homology CDS 4264842 4265711 . + 0 ID=cds-WJG96743.1;Parent=gene-PUW34_20705;Dbxref=NCBI_GP:WJG96743.1;Name=WJG96743.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=PUW34_20705;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WJG96743.1;transl_table=11 CP118122.1 Genbank gene 4265708 4265980 . - . ID=gene-PUW34_20710;Name=PUW34_20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20710 CP118122.1 Protein Homology CDS 4265708 4265980 . - 0 ID=cds-WJG96744.1;Parent=gene-PUW34_20710;Dbxref=NCBI_GP:WJG96744.1;Name=WJG96744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=PUW34_20710;product=DUF3811 domain-containing protein;protein_id=WJG96744.1;transl_table=11 CP118122.1 Genbank pseudogene 4266043 4266800 . - . ID=gene-PUW34_20715;Name=PUW34_20715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_20715;pseudo=true CP118122.1 Protein Homology CDS 4266043 4266800 . - 0 ID=cds-PUW34_20715;Parent=gene-PUW34_20715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=PUW34_20715;product=DeoR/GlpR family DNA-binding transcription regulator;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4266787 4267650 . - . ID=gene-PUW34_20720;Name=PUW34_20720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_20720;pseudo=true CP118122.1 Protein Homology CDS 4266787 4267650 . - 0 ID=cds-PUW34_20720;Parent=gene-PUW34_20720;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=PUW34_20720;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4267667 4268506 . - . ID=gene-PUW34_20725;Name=PUW34_20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20725 CP118122.1 Protein Homology CDS 4267667 4268506 . - 0 ID=cds-WJG96745.1;Parent=gene-PUW34_20725;Dbxref=NCBI_GP:WJG96745.1;Name=WJG96745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=PUW34_20725;product=histidine biosynthesis protein;protein_id=WJG96745.1;transl_table=11 CP118122.1 Genbank pseudogene 4268530 4269986 . - . ID=gene-PUW34_20730;Name=PUW34_20730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_20730;pseudo=true CP118122.1 Protein Homology CDS 4268530 4269986 . - 0 ID=cds-PUW34_20730;Parent=gene-PUW34_20730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=PUW34_20730;product=PTS sugar transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4270415 4271143 . - . ID=gene-PUW34_20735;Name=PUW34_20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20735 CP118122.1 Protein Homology CDS 4270415 4271143 . - 0 ID=cds-WJG96746.1;Parent=gene-PUW34_20735;Dbxref=NCBI_GP:WJG96746.1;Name=WJG96746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=PUW34_20735;product=hypothetical protein;protein_id=WJG96746.1;transl_table=11 CP118122.1 Genbank gene 4271754 4272008 . - . ID=gene-PUW34_20740;Name=PUW34_20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20740 CP118122.1 Protein Homology CDS 4271754 4272008 . - 0 ID=cds-WJG99058.1;Parent=gene-PUW34_20740;Dbxref=NCBI_GP:WJG99058.1;Name=WJG99058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.2;locus_tag=PUW34_20740;product=DapH/DapD/GlmU-related protein;protein_id=WJG99058.1;transl_table=11 CP118122.1 Genbank pseudogene 4272039 4272264 . - . ID=gene-PUW34_20745;Name=PUW34_20745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_20745;pseudo=true CP118122.1 Protein Homology CDS 4272039 4272264 . - 0 ID=cds-PUW34_20745;Parent=gene-PUW34_20745;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=PUW34_20745;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4272587 4272934 . + . ID=gene-PUW34_20750;Name=PUW34_20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20750 CP118122.1 Protein Homology CDS 4272587 4272934 . + 0 ID=cds-WJG96747.1;Parent=gene-PUW34_20750;Dbxref=NCBI_GP:WJG96747.1;Name=WJG96747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=PUW34_20750;product=Mor transcription activator family protein;protein_id=WJG96747.1;transl_table=11 CP118122.1 Genbank gene 4273065 4274414 . - . ID=gene-PUW34_20755;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=PUW34_20755 CP118122.1 Protein Homology CDS 4273065 4274414 . - 0 ID=cds-WJG96748.1;Parent=gene-PUW34_20755;Dbxref=NCBI_GP:WJG96748.1;Name=WJG96748.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=PUW34_20755;product=lysine-sensitive aspartokinase 3;protein_id=WJG96748.1;transl_table=11 CP118122.1 Genbank gene 4274802 4276451 . + . ID=gene-PUW34_20760;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=PUW34_20760 CP118122.1 Protein Homology CDS 4274802 4276451 . + 0 ID=cds-WJG96749.1;Parent=gene-PUW34_20760;Dbxref=NCBI_GP:WJG96749.1;Name=WJG96749.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=PUW34_20760;product=glucose-6-phosphate isomerase;protein_id=WJG96749.1;transl_table=11 CP118122.1 Genbank gene 4276894 4277136 . + . ID=gene-PUW34_20765;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=PUW34_20765 CP118122.1 Protein Homology CDS 4276894 4277136 . + 0 ID=cds-WJG99059.1;Parent=gene-PUW34_20765;Dbxref=NCBI_GP:WJG99059.1;Name=WJG99059.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=PUW34_20765;product=exopolysaccharide production protein YjbE;protein_id=WJG99059.1;transl_table=11 CP118122.1 Genbank gene 4277200 4277838 . + . ID=gene-PUW34_20770;Name=PUW34_20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20770 CP118122.1 Protein Homology CDS 4277200 4277838 . + 0 ID=cds-WJG96750.1;Parent=gene-PUW34_20770;Dbxref=NCBI_GP:WJG96750.1;Name=WJG96750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=PUW34_20770;product=YjbF family lipoprotein;protein_id=WJG96750.1;transl_table=11 CP118122.1 Genbank gene 4277835 4278572 . + . ID=gene-PUW34_20775;Name=PUW34_20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20775 CP118122.1 Protein Homology CDS 4277835 4278572 . + 0 ID=cds-WJG96751.1;Parent=gene-PUW34_20775;Dbxref=NCBI_GP:WJG96751.1;Name=WJG96751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=PUW34_20775;product=capsule biosynthesis GfcC family protein;protein_id=WJG96751.1;transl_table=11 CP118122.1 Genbank gene 4278572 4280668 . + . ID=gene-PUW34_20780;Name=PUW34_20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20780 CP118122.1 Protein Homology CDS 4278572 4280668 . + 0 ID=cds-WJG96752.1;Parent=gene-PUW34_20780;Dbxref=NCBI_GP:WJG96752.1;Name=WJG96752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=PUW34_20780;product=YjbH domain-containing protein;protein_id=WJG96752.1;transl_table=11 CP118122.1 Genbank gene 4280811 4281221 . + . ID=gene-PUW34_20785;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=PUW34_20785 CP118122.1 Protein Homology CDS 4280811 4281221 . + 0 ID=cds-WJG96753.1;Parent=gene-PUW34_20785;Dbxref=NCBI_GP:WJG96753.1;Name=WJG96753.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=PUW34_20785;product=phosphate-starvation-inducible protein PsiE;protein_id=WJG96753.1;transl_table=11 CP118122.1 Genbank gene 4281387 4282277 . - . ID=gene-PUW34_20790;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=PUW34_20790 CP118122.1 Protein Homology CDS 4281387 4282277 . - 0 ID=cds-WJG96754.1;Parent=gene-PUW34_20790;Dbxref=NCBI_GP:WJG96754.1;Name=WJG96754.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=PUW34_20790;product=maltose ABC transporter permease MalG;protein_id=WJG96754.1;transl_table=11 CP118122.1 Genbank gene 4282292 4283836 . - . ID=gene-PUW34_20795;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=PUW34_20795 CP118122.1 Protein Homology CDS 4282292 4283836 . - 0 ID=cds-WJG96755.1;Parent=gene-PUW34_20795;Dbxref=NCBI_GP:WJG96755.1;Name=WJG96755.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=PUW34_20795;product=maltose ABC transporter permease MalF;protein_id=WJG96755.1;transl_table=11 CP118122.1 Genbank gene 4283968 4285158 . - . ID=gene-PUW34_20800;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=PUW34_20800 CP118122.1 Protein Homology CDS 4283968 4285158 . - 0 ID=cds-WJG96756.1;Parent=gene-PUW34_20800;Dbxref=NCBI_GP:WJG96756.1;Name=WJG96756.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=PUW34_20800;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WJG96756.1;transl_table=11 CP118122.1 Genbank gene 4285519 4286628 . + . ID=gene-PUW34_20805;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=PUW34_20805 CP118122.1 Protein Homology CDS 4285519 4286628 . + 0 ID=cds-WJG96757.1;Parent=gene-PUW34_20805;Dbxref=NCBI_GP:WJG96757.1;Name=WJG96757.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=PUW34_20805;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WJG96757.1;transl_table=11 CP118122.1 Genbank gene 4286717 4288075 . + . ID=gene-PUW34_20810;Name=PUW34_20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20810 CP118122.1 Protein Homology CDS 4286717 4288075 . + 0 ID=cds-WJG96758.1;Parent=gene-PUW34_20810;Dbxref=NCBI_GP:WJG96758.1;Name=WJG96758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=PUW34_20810;product=maltoporin;protein_id=WJG96758.1;transl_table=11 CP118122.1 Genbank gene 4288239 4289156 . + . ID=gene-PUW34_20815;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=PUW34_20815 CP118122.1 Protein Homology CDS 4288239 4289156 . + 0 ID=cds-WJG96759.1;Parent=gene-PUW34_20815;Dbxref=NCBI_GP:WJG96759.1;Name=WJG96759.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=PUW34_20815;product=maltose operon protein MalM;protein_id=WJG96759.1;transl_table=11 CP118122.1 Genbank gene 4289337 4289834 . + . ID=gene-PUW34_20820;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=PUW34_20820 CP118122.1 Protein Homology CDS 4289337 4289834 . + 0 ID=cds-WJG96760.1;Parent=gene-PUW34_20820;Dbxref=NCBI_GP:WJG96760.1;Name=WJG96760.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=PUW34_20820;product=chorismate lyase;protein_id=WJG96760.1;transl_table=11 CP118122.1 Genbank gene 4289848 4290720 . + . ID=gene-PUW34_20825;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=PUW34_20825 CP118122.1 Protein Homology CDS 4289848 4290720 . + 0 ID=cds-WJG96761.1;Parent=gene-PUW34_20825;Dbxref=NCBI_GP:WJG96761.1;Name=WJG96761.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=PUW34_20825;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WJG96761.1;transl_table=11 CP118122.1 Genbank gene 4290819 4293239 . - . ID=gene-PUW34_20830;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=PUW34_20830 CP118122.1 Protein Homology CDS 4290819 4293239 . - 0 ID=cds-WJG96762.1;Parent=gene-PUW34_20830;Dbxref=NCBI_GP:WJG96762.1;Name=WJG96762.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=PUW34_20830;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WJG96762.1;transl_table=11 CP118122.1 Genbank gene 4293410 4293778 . + . ID=gene-PUW34_20835;Name=PUW34_20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20835 CP118122.1 Protein Homology CDS 4293410 4293778 . + 0 ID=cds-WJG96763.1;Parent=gene-PUW34_20835;Dbxref=NCBI_GP:WJG96763.1;Name=WJG96763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=PUW34_20835;product=diacylglycerol kinase;protein_id=WJG96763.1;transl_table=11 CP118122.1 Genbank gene 4293886 4294494 . + . ID=gene-PUW34_20840;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=PUW34_20840 CP118122.1 Protein Homology CDS 4293886 4294494 . + 0 ID=cds-WJG96764.1;Parent=gene-PUW34_20840;Dbxref=NCBI_GP:WJG96764.1;Name=WJG96764.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=PUW34_20840;product=transcriptional repressor LexA;protein_id=WJG96764.1;transl_table=11 CP118122.1 Genbank pseudogene 4294673 4295997 . + . ID=gene-PUW34_20845;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=pseudogene;locus_tag=PUW34_20845;pseudo=true CP118122.1 Protein Homology CDS 4294673 4295997 . + 0 ID=cds-PUW34_20845;Parent=gene-PUW34_20845;Note=frameshifted;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=PUW34_20845;product=MATE family efflux transporter DinF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4295994 4296107 . + . ID=gene-PUW34_20850;Name=PUW34_20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20850 CP118122.1 Protein Homology CDS 4295994 4296107 . + 0 ID=cds-WJG96765.1;Parent=gene-PUW34_20850;Dbxref=NCBI_GP:WJG96765.1;Name=WJG96765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=PUW34_20850;product=hypothetical protein;protein_id=WJG96765.1;transl_table=11 CP118122.1 Genbank gene 4296129 4296338 . + . ID=gene-PUW34_20855;Name=PUW34_20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20855 CP118122.1 Protein Homology CDS 4296129 4296338 . + 0 ID=cds-WJG99060.1;Parent=gene-PUW34_20855;Dbxref=NCBI_GP:WJG99060.1;Name=WJG99060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=PUW34_20855;product=CsbD family protein;protein_id=WJG99060.1;transl_table=11 CP118122.1 Genbank gene 4296437 4296952 . - . ID=gene-PUW34_20860;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=PUW34_20860 CP118122.1 Protein Homology CDS 4296437 4296952 . - 0 ID=cds-WJG96766.1;Parent=gene-PUW34_20860;Dbxref=NCBI_GP:WJG96766.1;Name=WJG96766.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=PUW34_20860;product=zinc uptake transcriptional repressor Zur;protein_id=WJG96766.1;transl_table=11 CP118122.1 Genbank pseudogene 4297199 4298508 . + . ID=gene-PUW34_20865;Name=PUW34_20865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_20865;pseudo=true CP118122.1 Protein Homology CDS 4297199 4298508 . + 0 ID=cds-PUW34_20865;Parent=gene-PUW34_20865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=PUW34_20865;product=conjugal transfer protein TraF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4298596 4299594 . + . ID=gene-PUW34_20870;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=PUW34_20870 CP118122.1 Protein Homology CDS 4298596 4299594 . + 0 ID=cds-WJG96767.1;Parent=gene-PUW34_20870;Dbxref=NCBI_GP:WJG96767.1;Name=WJG96767.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=PUW34_20870;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WJG96767.1;transl_table=11 CP118122.1 Genbank gene 4299762 4300004 . + . ID=gene-PUW34_20875;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=PUW34_20875 CP118122.1 Protein Homology CDS 4299762 4300004 . + 0 ID=cds-WJG96768.1;Parent=gene-PUW34_20875;Dbxref=NCBI_GP:WJG96768.1;Name=WJG96768.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=PUW34_20875;product=envelope stress response protein PspG;protein_id=WJG96768.1;transl_table=11 CP118122.1 Genbank gene 4300179 4301162 . - . ID=gene-PUW34_20880;Name=PUW34_20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20880 CP118122.1 Protein Homology CDS 4300179 4301162 . - 0 ID=cds-WJG96769.1;Parent=gene-PUW34_20880;Dbxref=NCBI_GP:WJG96769.1;Name=WJG96769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=PUW34_20880;product=quinone oxidoreductase;protein_id=WJG96769.1;transl_table=11 CP118122.1 Genbank gene 4301227 4302642 . + . ID=gene-PUW34_20885;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=PUW34_20885 CP118122.1 Protein Homology CDS 4301227 4302642 . + 0 ID=cds-WJG96770.1;Parent=gene-PUW34_20885;Dbxref=NCBI_GP:WJG96770.1;Name=WJG96770.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=PUW34_20885;product=replicative DNA helicase;protein_id=WJG96770.1;transl_table=11 CP118122.1 Genbank gene 4302674 4303753 . + . ID=gene-PUW34_20890;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=PUW34_20890 CP118122.1 Protein Homology CDS 4302674 4303753 . + 0 ID=cds-WJG96771.1;Parent=gene-PUW34_20890;Dbxref=NCBI_GP:WJG96771.1;Name=WJG96771.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=PUW34_20890;product=alanine racemase;protein_id=WJG96771.1;transl_table=11 CP118122.1 Genbank gene 4303939 4305132 . + . ID=gene-PUW34_20895;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=PUW34_20895 CP118122.1 Protein Homology CDS 4303939 4305132 . + 0 ID=cds-WJG96772.1;Parent=gene-PUW34_20895;Dbxref=NCBI_GP:WJG96772.1;Name=WJG96772.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=PUW34_20895;product=aromatic amino acid transaminase;protein_id=WJG96772.1;transl_table=11 CP118122.1 Genbank gene 4305319 4306032 . + . ID=gene-PUW34_20900;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=PUW34_20900 CP118122.1 Protein Homology CDS 4305319 4306032 . + 0 ID=cds-WJG96773.1;Parent=gene-PUW34_20900;Dbxref=NCBI_GP:WJG96773.1;Name=WJG96773.1;Ontology_term=GO:0003993;gbkey=CDS;gene=aphA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=PUW34_20900;product=acid phosphatase AphA;protein_id=WJG96773.1;transl_table=11 CP118122.1 Genbank gene 4306161 4306577 . + . ID=gene-PUW34_20905;Name=PUW34_20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20905 CP118122.1 Protein Homology CDS 4306161 4306577 . + 0 ID=cds-WJG96774.1;Parent=gene-PUW34_20905;Dbxref=NCBI_GP:WJG96774.1;Name=WJG96774.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=PUW34_20905;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WJG96774.1;transl_table=11 CP118122.1 Genbank gene 4306580 4306936 . + . ID=gene-PUW34_20910;Name=PUW34_20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20910 CP118122.1 Protein Homology CDS 4306580 4306936 . + 0 ID=cds-WJG96775.1;Parent=gene-PUW34_20910;Dbxref=NCBI_GP:WJG96775.1;Name=WJG96775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=PUW34_20910;product=MmcQ/YjbR family DNA-binding protein;protein_id=WJG96775.1;transl_table=11 CP118122.1 Genbank gene 4306937 4307275 . - . ID=gene-PUW34_20915;Name=PUW34_20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20915 CP118122.1 Protein Homology CDS 4306937 4307275 . - 0 ID=cds-WJG96776.1;Parent=gene-PUW34_20915;Dbxref=NCBI_GP:WJG96776.1;Name=WJG96776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=PUW34_20915;product=hypothetical protein;protein_id=WJG96776.1;transl_table=11 CP118122.1 Genbank gene 4307262 4307717 . - . ID=gene-PUW34_20920;Name=PUW34_20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20920 CP118122.1 Protein Homology CDS 4307262 4307717 . - 0 ID=cds-WJG96777.1;Parent=gene-PUW34_20920;Dbxref=NCBI_GP:WJG96777.1;Name=WJG96777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=PUW34_20920;product=hypothetical protein;protein_id=WJG96777.1;transl_table=11 CP118122.1 Genbank gene 4307849 4310674 . - . ID=gene-PUW34_20925;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=PUW34_20925 CP118122.1 Protein Homology CDS 4307849 4310674 . - 0 ID=cds-WJG96778.1;Parent=gene-PUW34_20925;Dbxref=NCBI_GP:WJG96778.1;Name=WJG96778.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=PUW34_20925;product=excinuclease ABC subunit UvrA;protein_id=WJG96778.1;transl_table=11 CP118122.1 Genbank gene 4310922 4311452 . + . ID=gene-PUW34_20930;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=PUW34_20930 CP118122.1 Protein Homology CDS 4310922 4311452 . + 0 ID=cds-WJG96779.1;Parent=gene-PUW34_20930;Dbxref=NCBI_GP:WJG96779.1;Name=WJG96779.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=PUW34_20930;product=single-stranded DNA-binding protein SSB1;protein_id=WJG96779.1;transl_table=11 CP118122.1 Genbank gene 4312493 4313125 . + . ID=gene-PUW34_20935;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=PUW34_20935 CP118122.1 Protein Homology CDS 4312493 4313125 . + 0 ID=cds-WJG96780.1;Parent=gene-PUW34_20935;Dbxref=NCBI_GP:WJG96780.1;Name=WJG96780.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=PUW34_20935;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WJG96780.1;transl_table=11 CP118122.1 Genbank gene 4313122 4314510 . + . ID=gene-PUW34_20940;Name=PUW34_20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20940 CP118122.1 Protein Homology CDS 4313122 4314510 . + 0 ID=cds-WJG96781.1;Parent=gene-PUW34_20940;Dbxref=NCBI_GP:WJG96781.1;Name=WJG96781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=PUW34_20940;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WJG96781.1;transl_table=11 CP118122.1 Genbank gene 4314500 4315819 . + . ID=gene-PUW34_20945;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=PUW34_20945 CP118122.1 Protein Homology CDS 4314500 4315819 . + 0 ID=cds-WJG96782.1;Parent=gene-PUW34_20945;Dbxref=NCBI_GP:WJG96782.1;Name=WJG96782.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=PUW34_20945;product=SPI-4 type I secretion system protein SiiC;protein_id=WJG96782.1;transl_table=11 CP118122.1 Genbank gene 4315816 4317093 . + . ID=gene-PUW34_20950;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=PUW34_20950 CP118122.1 Protein Homology CDS 4315816 4317093 . + 0 ID=cds-WJG96783.1;Parent=gene-PUW34_20950;Dbxref=NCBI_GP:WJG96783.1;Name=WJG96783.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=PUW34_20950;product=SPI-4 type I secretion system protein SiiD;protein_id=WJG96783.1;transl_table=11 CP118122.1 Genbank gene 4317110 4333789 . + . ID=gene-PUW34_20955;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=PUW34_20955 CP118122.1 Protein Homology CDS 4317110 4333789 . + 0 ID=cds-WJG96784.1;Parent=gene-PUW34_20955;Dbxref=NCBI_GP:WJG96784.1;Name=WJG96784.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=PUW34_20955;product=non-fimbrial adhesin SiiE;protein_id=WJG96784.1;transl_table=11 CP118122.1 Genbank gene 4333829 4335895 . + . ID=gene-PUW34_20960;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=PUW34_20960 CP118122.1 Protein Homology CDS 4333829 4335895 . + 0 ID=cds-WJG96785.1;Parent=gene-PUW34_20960;Dbxref=NCBI_GP:WJG96785.1;Name=WJG96785.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=PUW34_20960;product=SPI-4 type I secretion system protein SiiF;protein_id=WJG96785.1;transl_table=11 CP118122.1 Genbank gene 4336173 4336454 . - . ID=gene-PUW34_20965;Name=PUW34_20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20965 CP118122.1 Protein Homology CDS 4336173 4336454 . - 0 ID=cds-WJG96786.1;Parent=gene-PUW34_20965;Dbxref=NCBI_GP:WJG96786.1;Name=WJG96786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=PUW34_20965;product=YjcB family protein;protein_id=WJG96786.1;transl_table=11 CP118122.1 Genbank pseudogene 4337016 4338610 . + . ID=gene-PUW34_20970;Name=PUW34_20970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_20970;pseudo=true CP118122.1 Protein Homology CDS 4337016 4338610 . + 0 ID=cds-PUW34_20970;Parent=gene-PUW34_20970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=PUW34_20970;product=EAL domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4338598 4338921 . - . ID=gene-PUW34_20975;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=PUW34_20975 CP118122.1 Protein Homology CDS 4338598 4338921 . - 0 ID=cds-WJG96787.1;Parent=gene-PUW34_20975;Dbxref=NCBI_GP:WJG96787.1;Name=WJG96787.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=PUW34_20975;product=superoxide response transcriptional regulator SoxS;protein_id=WJG96787.1;transl_table=11 CP118122.1 Genbank pseudogene 4339008 4339464 . + . ID=gene-PUW34_20980;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=pseudogene;locus_tag=PUW34_20980;pseudo=true CP118122.1 Protein Homology CDS 4339008 4339464 . + 0 ID=cds-PUW34_20980;Parent=gene-PUW34_20980;Note=frameshifted;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=PUW34_20980;product=redox-sensitive transcriptional activator SoxR;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4339757 4340425 . + . ID=gene-PUW34_20985;Name=PUW34_20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_20985 CP118122.1 Protein Homology CDS 4339757 4340425 . + 0 ID=cds-WJG96788.1;Parent=gene-PUW34_20985;Dbxref=NCBI_GP:WJG96788.1;Name=WJG96788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=PUW34_20985;product=glutathione S-transferase;protein_id=WJG96788.1;transl_table=11 CP118122.1 Genbank pseudogene 4340773 4342121 . + . ID=gene-PUW34_20990;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=pseudogene;gene_synonym=yjcD;locus_tag=PUW34_20990;pseudo=true CP118122.1 Protein Homology CDS 4340773 4342121 . + 0 ID=cds-PUW34_20990;Parent=gene-PUW34_20990;Note=frameshifted;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=PUW34_20990;product=guanine/hypoxanthine transporter GhxP;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4342271 4343915 . + . ID=gene-PUW34_20995;Name=PUW34_20995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_20995;pseudo=true CP118122.1 Protein Homology CDS 4342271 4343915 . + 0 ID=cds-PUW34_20995;Parent=gene-PUW34_20995;Note=frameshifted;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=PUW34_20995;product=Na+/H+ antiporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4344010 4344897 . - . ID=gene-PUW34_21000;Name=PUW34_21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21000 CP118122.1 Protein Homology CDS 4344010 4344897 . - 0 ID=cds-WJG96789.1;Parent=gene-PUW34_21000;Dbxref=NCBI_GP:WJG96789.1;Name=WJG96789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=PUW34_21000;product=LysR family transcriptional regulator;protein_id=WJG96789.1;transl_table=11 CP118122.1 Genbank gene 4345001 4345411 . + . ID=gene-PUW34_21005;Name=PUW34_21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21005 CP118122.1 Protein Homology CDS 4345001 4345411 . + 0 ID=cds-WJG96790.1;Parent=gene-PUW34_21005;Dbxref=NCBI_GP:WJG96790.1;Name=WJG96790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=PUW34_21005;product=CidA/LrgA family protein;protein_id=WJG96790.1;transl_table=11 CP118122.1 Genbank gene 4345404 4346093 . + . ID=gene-PUW34_21010;Name=PUW34_21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21010 CP118122.1 Protein Homology CDS 4345404 4346093 . + 0 ID=cds-WJG96791.1;Parent=gene-PUW34_21010;Dbxref=NCBI_GP:WJG96791.1;Name=WJG96791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=PUW34_21010;product=LrgB family protein;protein_id=WJG96791.1;transl_table=11 CP118122.1 Genbank gene 4346131 4347780 . - . ID=gene-PUW34_21015;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=PUW34_21015 CP118122.1 Protein Homology CDS 4346131 4347780 . - 0 ID=cds-WJG96792.1;Parent=gene-PUW34_21015;Dbxref=NCBI_GP:WJG96792.1;Name=WJG96792.1;Ontology_term=GO:0006814,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=PUW34_21015;product=cation/acetate symporter ActP;protein_id=WJG96792.1;transl_table=11 CP118122.1 Genbank gene 4347777 4348091 . - . ID=gene-PUW34_21020;Name=PUW34_21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21020 CP118122.1 Protein Homology CDS 4347777 4348091 . - 0 ID=cds-WJG99061.1;Parent=gene-PUW34_21020;Dbxref=NCBI_GP:WJG99061.1;Name=WJG99061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=PUW34_21020;product=DUF485 domain-containing protein;protein_id=WJG99061.1;transl_table=11 CP118122.1 Genbank pseudogene 4348337 4350294 . - . ID=gene-PUW34_21025;Name=acs;gbkey=Gene;gene=acs;gene_biotype=pseudogene;locus_tag=PUW34_21025;pseudo=true CP118122.1 Protein Homology CDS 4348337 4350294 . - 0 ID=cds-PUW34_21025;Parent=gene-PUW34_21025;Note=frameshifted;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=PUW34_21025;product=acetate--CoA ligase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4350726 4352162 . + . ID=gene-PUW34_21030;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=PUW34_21030 CP118122.1 Protein Homology CDS 4350726 4352162 . + 0 ID=cds-WJG96793.1;Parent=gene-PUW34_21030;Dbxref=NCBI_GP:WJG96793.1;Name=WJG96793.1;Ontology_term=GO:0042279;gbkey=CDS;gene=nrfA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=PUW34_21030;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WJG96793.1;transl_table=11 CP118122.1 Genbank gene 4352274 4352840 . + . ID=gene-PUW34_21035;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=PUW34_21035 CP118122.1 Protein Homology CDS 4352274 4352840 . + 0 ID=cds-WJG96794.1;Parent=gene-PUW34_21035;Dbxref=NCBI_GP:WJG96794.1;Name=WJG96794.1;Ontology_term=GO:0006807,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=PUW34_21035;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WJG96794.1;transl_table=11 CP118122.1 Genbank gene 4352837 4353508 . + . ID=gene-PUW34_21040;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=PUW34_21040 CP118122.1 Protein Homology CDS 4352837 4353508 . + 0 ID=cds-WJG96795.1;Parent=gene-PUW34_21040;Dbxref=NCBI_GP:WJG96795.1;Name=WJG96795.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=PUW34_21040;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WJG96795.1;transl_table=11 CP118122.1 Genbank gene 4353505 4354461 . + . ID=gene-PUW34_21045;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=PUW34_21045 CP118122.1 Protein Homology CDS 4353505 4354461 . + 0 ID=cds-WJG96796.1;Parent=gene-PUW34_21045;Dbxref=NCBI_GP:WJG96796.1;Name=WJG96796.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=PUW34_21045;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WJG96796.1;transl_table=11 CP118122.1 Genbank pseudogene 4354454 4356692 . + . ID=gene-PUW34_21050;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=PUW34_21050;pseudo=true CP118122.1 Protein Homology CDS 4354454 4356692 . + 0 ID=cds-PUW34_21050;Parent=gene-PUW34_21050;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=PUW34_21050;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4356689 4357309 . + . ID=gene-PUW34_21055;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=PUW34_21055 CP118122.1 Protein Homology CDS 4356689 4357309 . + 0 ID=cds-WJG96797.1;Parent=gene-PUW34_21055;Dbxref=NCBI_GP:WJG96797.1;Name=WJG96797.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=PUW34_21055;product=heme lyase NrfEFG subunit NrfG;protein_id=WJG96797.1;transl_table=11 CP118122.1 Genbank gene 4357654 4358964 . + . ID=gene-PUW34_21060;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=PUW34_21060 CP118122.1 Protein Homology CDS 4357654 4358964 . + 0 ID=cds-WJG96798.1;Parent=gene-PUW34_21060;Dbxref=NCBI_GP:WJG96798.1;Name=WJG96798.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=PUW34_21060;product=glutamate/aspartate:proton symporter GltP;protein_id=WJG96798.1;transl_table=11 CP118122.1 Genbank gene 4359122 4359811 . - . ID=gene-PUW34_21065;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=PUW34_21065 CP118122.1 Protein Homology CDS 4359122 4359811 . - 0 ID=cds-WJG96799.1;Parent=gene-PUW34_21065;Dbxref=NCBI_GP:WJG96799.1;Name=WJG96799.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=PUW34_21065;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WJG96799.1;transl_table=11 CP118122.1 Genbank gene 4359988 4362135 . - . ID=gene-PUW34_21070;Name=PUW34_21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21070 CP118122.1 Protein Homology CDS 4359988 4362135 . - 0 ID=cds-WJG96800.1;Parent=gene-PUW34_21070;Dbxref=NCBI_GP:WJG96800.1;Name=WJG96800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=PUW34_21070;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WJG96800.1;transl_except=(pos:complement(4361716..4361718)%2Caa:Sec);transl_table=11 CP118122.1 Genbank pseudogene 4362490 4363397 . - . ID=gene-PUW34_21075;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=pseudogene;locus_tag=PUW34_21075;pseudo=true CP118122.1 Protein Homology CDS 4362490 4363397 . - 0 ID=cds-PUW34_21075;Parent=gene-PUW34_21075;Note=frameshifted;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=PUW34_21075;product=lipid A hydroxylase LpxO;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4363655 4364089 . - . ID=gene-PUW34_21080;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=PUW34_21080 CP118122.1 Protein Homology CDS 4363655 4364089 . - 0 ID=cds-WJG96801.1;Parent=gene-PUW34_21080;Dbxref=NCBI_GP:WJG96801.1;Name=WJG96801.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=PUW34_21080;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WJG96801.1;transl_table=11 CP118122.1 Genbank gene 4364241 4364684 . - . ID=gene-PUW34_21085;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=PUW34_21085 CP118122.1 Protein Homology CDS 4364241 4364684 . - 0 ID=cds-WJG96802.1;Parent=gene-PUW34_21085;Dbxref=NCBI_GP:WJG96802.1;Name=WJG96802.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=PUW34_21085;product=VOC family metalloprotein YjdN;protein_id=WJG96802.1;transl_table=11 CP118122.1 Genbank gene 4364804 4365139 . - . ID=gene-PUW34_21090;Name=PUW34_21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21090 CP118122.1 Protein Homology CDS 4364804 4365139 . - 0 ID=cds-WJG96803.1;Parent=gene-PUW34_21090;Dbxref=NCBI_GP:WJG96803.1;Name=WJG96803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=PUW34_21090;product=zinc ribbon domain-containing protein YjdM;protein_id=WJG96803.1;transl_table=11 CP118122.1 Genbank gene 4365607 4367109 . + . ID=gene-PUW34_21095;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=PUW34_21095 CP118122.1 Protein Homology CDS 4365607 4367109 . + 0 ID=cds-WJG96804.1;Parent=gene-PUW34_21095;Dbxref=NCBI_GP:WJG96804.1;Name=WJG96804.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=PUW34_21095;product=glycine betaine/L-proline transporter ProP;protein_id=WJG96804.1;transl_table=11 CP118122.1 Genbank gene 4367179 4367268 . + . ID=gene-PUW34_21100;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=PUW34_21100 CP118122.1 Protein Homology CDS 4367179 4367268 . + 0 ID=cds-WJG96805.1;Parent=gene-PUW34_21100;Dbxref=NCBI_GP:WJG96805.1;Name=WJG96805.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=PUW34_21100;product=LpxT activity modulator PmrR;protein_id=WJG96805.1;transl_table=11 CP118122.1 Genbank gene 4367276 4368346 . - . ID=gene-PUW34_21105;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=PUW34_21105 CP118122.1 Protein Homology CDS 4367276 4368346 . - 0 ID=cds-WJG99062.1;Parent=gene-PUW34_21105;Dbxref=NCBI_GP:WJG99062.1;Name=WJG99062.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=PUW34_21105;product=two-component system sensor histidine kinase PmrB;protein_id=WJG99062.1;transl_table=11 CP118122.1 Genbank gene 4368356 4369024 . - . ID=gene-PUW34_21110;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=PUW34_21110 CP118122.1 Protein Homology CDS 4368356 4369024 . - 0 ID=cds-WJG96806.1;Parent=gene-PUW34_21110;Dbxref=NCBI_GP:WJG96806.1;Name=WJG96806.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=PUW34_21110;product=two-component system response regulator PmrA;protein_id=WJG96806.1;transl_table=11 CP118122.1 Genbank gene 4369021 4370664 . - . ID=gene-PUW34_21115;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=PUW34_21115 CP118122.1 Protein Homology CDS 4369021 4370664 . - 0 ID=cds-WJG96807.1;Parent=gene-PUW34_21115;Dbxref=NCBI_GP:WJG96807.1;Name=WJG96807.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=PUW34_21115;product=phosphoethanolamine transferase EptA;protein_id=WJG96807.1;transl_table=11 CP118122.1 Genbank gene 4370798 4372135 . - . ID=gene-PUW34_21120;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=PUW34_21120 CP118122.1 Protein Homology CDS 4370798 4372135 . - 0 ID=cds-WJG96808.1;Parent=gene-PUW34_21120;Dbxref=NCBI_GP:WJG96808.1;Name=WJG96808.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=PUW34_21120;product=arginine/agmatine antiporter;protein_id=WJG96808.1;transl_table=11 CP118122.1 Genbank pseudogene 4372275 4373035 . - . ID=gene-PUW34_21125;Name=PUW34_21125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21125;pseudo=true CP118122.1 Protein Homology CDS 4372275 4373035 . - 0 ID=cds-PUW34_21125;Parent=gene-PUW34_21125;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=PUW34_21125;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4373333 4375599 . - . ID=gene-PUW34_21130;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=pseudogene;locus_tag=PUW34_21130;pseudo=true CP118122.1 Protein Homology CDS 4373333 4375599 . - 0 ID=cds-PUW34_21130;Parent=gene-PUW34_21130;Note=frameshifted;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=PUW34_21130;product=arginine decarboxylase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4375832 4376764 . - . ID=gene-PUW34_21135;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=PUW34_21135 CP118122.1 Protein Homology CDS 4375832 4376764 . - 0 ID=cds-WJG96809.1;Parent=gene-PUW34_21135;Dbxref=NCBI_GP:WJG96809.1;Name=WJG96809.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=PUW34_21135;product=transcriptional regulator MelR;protein_id=WJG96809.1;transl_table=11 CP118122.1 Genbank gene 4377033 4378388 . + . ID=gene-PUW34_21140;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=PUW34_21140 CP118122.1 Protein Homology CDS 4377033 4378388 . + 0 ID=cds-WJG96810.1;Parent=gene-PUW34_21140;Dbxref=NCBI_GP:WJG96810.1;Name=WJG96810.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=PUW34_21140;product=alpha-galactosidase;protein_id=WJG96810.1;transl_table=11 CP118122.1 Genbank gene 4378472 4379902 . + . ID=gene-PUW34_21145;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=PUW34_21145 CP118122.1 Protein Homology CDS 4378472 4379902 . + 0 ID=cds-WJG96811.1;Parent=gene-PUW34_21145;Dbxref=NCBI_GP:WJG96811.1;Name=WJG96811.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=PUW34_21145;product=melibiose:sodium transporter MelB;protein_id=WJG96811.1;transl_table=11 CP118122.1 Genbank gene 4380009 4381655 . - . ID=gene-PUW34_21150;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=PUW34_21150 CP118122.1 Protein Homology CDS 4380009 4381655 . - 0 ID=cds-WJG96812.1;Parent=gene-PUW34_21150;Dbxref=NCBI_GP:WJG96812.1;Name=WJG96812.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=PUW34_21150;product=class I fumarate hydratase FumA;protein_id=WJG96812.1;transl_table=11 CP118122.1 Genbank gene 4381751 4383091 . - . ID=gene-PUW34_21155;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=PUW34_21155 CP118122.1 Protein Homology CDS 4381751 4383091 . - 0 ID=cds-WJG96813.1;Parent=gene-PUW34_21155;Dbxref=NCBI_GP:WJG96813.1;Name=WJG96813.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=PUW34_21155;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WJG96813.1;transl_table=11 CP118122.1 Genbank gene 4383238 4383504 . - . ID=gene-PUW34_21160;Name=PUW34_21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21160 CP118122.1 Protein Homology CDS 4383238 4383504 . - 0 ID=cds-WJG96814.1;Parent=gene-PUW34_21160;Dbxref=NCBI_GP:WJG96814.1;Name=WJG96814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=PUW34_21160;product=hypothetical protein;protein_id=WJG96814.1;transl_table=11 CP118122.1 Genbank gene 4383821 4384540 . - . ID=gene-PUW34_21165;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=PUW34_21165 CP118122.1 Protein Homology CDS 4383821 4384540 . - 0 ID=cds-WJG96815.1;Parent=gene-PUW34_21165;Dbxref=NCBI_GP:WJG96815.1;Name=WJG96815.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=PUW34_21165;product=two-component system response regulator DcuR;protein_id=WJG96815.1;transl_table=11 CP118122.1 Genbank pseudogene 4384537 4386167 . - . ID=gene-PUW34_21170;Name=PUW34_21170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21170;pseudo=true CP118122.1 Protein Homology CDS 4384537 4386167 . - 0 ID=cds-PUW34_21170;Parent=gene-PUW34_21170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=PUW34_21170;product=sensor histidine kinase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4386542 4388971 . + . ID=gene-PUW34_21175;Name=PUW34_21175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21175;pseudo=true CP118122.1 Protein Homology CDS 4386542 4388971 . + 0 ID=cds-PUW34_21175;Parent=gene-PUW34_21175;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=PUW34_21175;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4388985 4389611 . + . ID=gene-PUW34_21180;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW34_21180 CP118122.1 Protein Homology CDS 4388985 4389611 . + 0 ID=cds-WJG96816.1;Parent=gene-PUW34_21180;Dbxref=NCBI_GP:WJG96816.1;Name=WJG96816.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=PUW34_21180;product=dimethylsulfoxide reductase subunit B;protein_id=WJG96816.1;transl_table=11 CP118122.1 Genbank gene 4389604 4390377 . + . ID=gene-PUW34_21185;Name=PUW34_21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21185 CP118122.1 Protein Homology CDS 4389604 4390377 . + 0 ID=cds-WJG96817.1;Parent=gene-PUW34_21185;Dbxref=NCBI_GP:WJG96817.1;Name=WJG96817.1;Ontology_term=GO:0019645,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=PUW34_21185;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJG96817.1;transl_table=11 CP118122.1 Genbank gene 4390392 4391045 . + . ID=gene-PUW34_21190;Name=PUW34_21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21190 CP118122.1 Protein Homology CDS 4390392 4391045 . + 0 ID=cds-WJG99063.1;Parent=gene-PUW34_21190;Dbxref=NCBI_GP:WJG99063.1;Name=WJG99063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463173.1;locus_tag=PUW34_21190;product=molecular chaperone;protein_id=WJG99063.1;transl_table=11 CP118122.1 Genbank gene 4391129 4392529 . - . ID=gene-PUW34_21195;Name=PUW34_21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21195 CP118122.1 Protein Homology CDS 4391129 4392529 . - 0 ID=cds-WJG96818.1;Parent=gene-PUW34_21195;Dbxref=NCBI_GP:WJG96818.1;Name=WJG96818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=PUW34_21195;product=DUF1996 domain-containing protein;protein_id=WJG96818.1;transl_table=11 CP118122.1 Genbank gene 4392833 4393738 . + . ID=gene-PUW34_21200;Name=PUW34_21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21200 CP118122.1 Protein Homology CDS 4392833 4393738 . + 0 ID=cds-WJG96819.1;Parent=gene-PUW34_21200;Dbxref=NCBI_GP:WJG96819.1;Name=WJG96819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=PUW34_21200;product=YjiK family protein;protein_id=WJG96819.1;transl_table=11 CP118122.1 Genbank pseudogene 4394028 4394159 . - . ID=gene-PUW34_21205;Name=PUW34_21205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21205;pseudo=true CP118122.1 Protein Homology CDS 4394028 4394159 . - 0 ID=cds-PUW34_21205;Parent=gene-PUW34_21205;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=PUW34_21205;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4394271 4394519 . - . ID=gene-PUW34_21210;Name=PUW34_21210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21210;pseudo=true CP118122.1 Protein Homology CDS 4394271 4394519 . - 0 ID=cds-PUW34_21210;Parent=gene-PUW34_21210;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=PUW34_21210;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4394518 4394826 . + . ID=gene-PUW34_21215;Name=PUW34_21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21215 CP118122.1 Protein Homology CDS 4394518 4394826 . + 0 ID=cds-WJG96820.1;Parent=gene-PUW34_21215;Dbxref=NCBI_GP:WJG96820.1;Name=WJG96820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001673658.1;locus_tag=PUW34_21215;product=ABC transporter ATP-binding protein;protein_id=WJG96820.1;transl_table=11 CP118122.1 Genbank gene 4394819 4395106 . - . ID=gene-PUW34_21220;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=PUW34_21220 CP118122.1 Protein Homology CDS 4394819 4395106 . - 0 ID=cds-WJG96821.1;Parent=gene-PUW34_21220;Dbxref=NCBI_GP:WJG96821.1;Name=WJG96821.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=PUW34_21220;product=transcriptional regulator RtsB;protein_id=WJG96821.1;transl_table=11 CP118122.1 Genbank gene 4395103 4395978 . - . ID=gene-PUW34_21225;Name=PUW34_21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21225 CP118122.1 Protein Homology CDS 4395103 4395978 . - 0 ID=cds-WJG96822.1;Parent=gene-PUW34_21225;Dbxref=NCBI_GP:WJG96822.1;Name=WJG96822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=PUW34_21225;product=AraC family transcriptional regulator;protein_id=WJG96822.1;transl_table=11 CP118122.1 Genbank gene 4396244 4396465 . - . ID=gene-PUW34_21230;Name=PUW34_21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21230 CP118122.1 Protein Homology CDS 4396244 4396465 . - 0 ID=cds-WJG96823.1;Parent=gene-PUW34_21230;Dbxref=NCBI_GP:WJG96823.1;Name=WJG96823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=PUW34_21230;product=hypothetical protein;protein_id=WJG96823.1;transl_table=11 CP118122.1 Genbank gene 4396782 4397075 . + . ID=gene-PUW34_21235;Name=PUW34_21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21235 CP118122.1 Protein Homology CDS 4396782 4397075 . + 0 ID=cds-WJG96824.1;Parent=gene-PUW34_21235;Dbxref=NCBI_GP:WJG96824.1;Name=WJG96824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=PUW34_21235;product=DUF1778 domain-containing protein;protein_id=WJG96824.1;transl_table=11 CP118122.1 Genbank gene 4397072 4397563 . + . ID=gene-PUW34_21240;Name=PUW34_21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21240 CP118122.1 Protein Homology CDS 4397072 4397563 . + 0 ID=cds-WJG96825.1;Parent=gene-PUW34_21240;Dbxref=NCBI_GP:WJG96825.1;Name=WJG96825.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=PUW34_21240;product=GNAT family N-acetyltransferase;protein_id=WJG96825.1;transl_table=11 CP118122.1 Genbank gene 4397811 4398563 . - . ID=gene-PUW34_21245;Name=PUW34_21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21245 CP118122.1 Protein Homology CDS 4397811 4398563 . - 0 ID=cds-WJG96826.1;Parent=gene-PUW34_21245;Dbxref=NCBI_GP:WJG96826.1;Name=WJG96826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=PUW34_21245;product=non-specific acid phosphatase;protein_id=WJG96826.1;transl_table=11 CP118122.1 Genbank pseudogene 4398663 4398740 . - . ID=gene-PUW34_21250;Name=PUW34_21250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21250;pseudo=true CP118122.1 Protein Homology CDS 4398663 4398740 . - 0 ID=cds-PUW34_21250;Parent=gene-PUW34_21250;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=PUW34_21250;product=porin family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4399120 4399194 . + . ID=gene-PUW34_21255;Name=PUW34_21255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21255;pseudo=true CP118122.1 Protein Homology CDS 4399120 4399194 . + 0 ID=cds-PUW34_21255;Parent=gene-PUW34_21255;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565644.1;locus_tag=PUW34_21255;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4399274 4399349 . - . ID=gene-PUW34_21260;Name=PUW34_21260;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_21260 CP118122.1 tRNAscan-SE tRNA 4399274 4399349 . - . ID=rna-PUW34_21260;Parent=gene-PUW34_21260;anticodon=(pos:complement(4399314..4399316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_21260;product=tRNA-Phe CP118122.1 tRNAscan-SE exon 4399274 4399349 . - . ID=exon-PUW34_21260-1;Parent=rna-PUW34_21260;anticodon=(pos:complement(4399314..4399316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_21260;product=tRNA-Phe CP118122.1 Genbank gene 4399465 4400040 . - . ID=gene-PUW34_21265;Name=PUW34_21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21265 CP118122.1 Protein Homology CDS 4399465 4400040 . - 0 ID=cds-WJG96827.1;Parent=gene-PUW34_21265;Dbxref=NCBI_GP:WJG96827.1;Name=WJG96827.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=PUW34_21265;product=transcriptional regulator;protein_id=WJG96827.1;transl_table=11 CP118122.1 Genbank gene 4400077 4401780 . - . ID=gene-PUW34_21270;Name=PUW34_21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21270 CP118122.1 Protein Homology CDS 4400077 4401780 . - 0 ID=cds-WJG96828.1;Parent=gene-PUW34_21270;Dbxref=NCBI_GP:WJG96828.1;Name=WJG96828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=PUW34_21270;product=protein-disulfide reductase DsbD;protein_id=WJG96828.1;transl_table=11 CP118122.1 Genbank gene 4401756 4402103 . - . ID=gene-PUW34_21275;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=PUW34_21275 CP118122.1 Protein Homology CDS 4401756 4402103 . - 0 ID=cds-WJG96829.1;Parent=gene-PUW34_21275;Dbxref=NCBI_GP:WJG96829.1;Name=WJG96829.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=PUW34_21275;product=divalent cation tolerance protein CutA;protein_id=WJG96829.1;transl_table=11 CP118122.1 Genbank gene 4402224 4403525 . - . ID=gene-PUW34_21280;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=PUW34_21280 CP118122.1 Protein Homology CDS 4402224 4403525 . - 0 ID=cds-WJG96830.1;Parent=gene-PUW34_21280;Dbxref=NCBI_GP:WJG96830.1;Name=WJG96830.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=PUW34_21280;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WJG96830.1;transl_table=11 CP118122.1 Genbank gene 4403640 4405076 . - . ID=gene-PUW34_21285;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=PUW34_21285 CP118122.1 Protein Homology CDS 4403640 4405076 . - 0 ID=cds-WJG96831.1;Parent=gene-PUW34_21285;Dbxref=NCBI_GP:WJG96831.1;Name=WJG96831.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=PUW34_21285;product=aspartate ammonia-lyase;protein_id=WJG96831.1;transl_table=11 CP118122.1 Genbank gene 4405417 4405893 . + . ID=gene-PUW34_21290;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=PUW34_21290 CP118122.1 Protein Homology CDS 4405417 4405893 . + 0 ID=cds-WJG96832.1;Parent=gene-PUW34_21290;Dbxref=NCBI_GP:WJG96832.1;Name=WJG96832.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=PUW34_21290;product=membrane protein FxsA;protein_id=WJG96832.1;transl_table=11 CP118122.1 Genbank pseudogene 4405952 4407189 . - . ID=gene-PUW34_21295;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=pseudogene;locus_tag=PUW34_21295;pseudo=true CP118122.1 Protein Homology CDS 4405952 4407189 . - 0 ID=cds-PUW34_21295;Parent=gene-PUW34_21295;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=PUW34_21295;product=L-methionine/branched-chain amino acid transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4407466 4407759 . + . ID=gene-PUW34_21300;Name=PUW34_21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21300 CP118122.1 Protein Homology CDS 4407466 4407759 . + 0 ID=cds-WJG99064.1;Parent=gene-PUW34_21300;Dbxref=NCBI_GP:WJG99064.1;Name=WJG99064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=PUW34_21300;product=co-chaperone GroES;protein_id=WJG99064.1;transl_table=11 CP118122.1 Genbank gene 4407803 4409449 . + . ID=gene-PUW34_21305;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=PUW34_21305 CP118122.1 Protein Homology CDS 4407803 4409449 . + 0 ID=cds-WJG96833.1;Parent=gene-PUW34_21305;Dbxref=NCBI_GP:WJG96833.1;Name=WJG96833.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=PUW34_21305;product=chaperonin GroEL;protein_id=WJG96833.1;transl_table=11 CP118122.1 Genbank gene 4409693 4410046 . + . ID=gene-PUW34_21310;Name=PUW34_21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21310 CP118122.1 Protein Homology CDS 4409693 4410046 . + 0 ID=cds-WJG96834.1;Parent=gene-PUW34_21310;Dbxref=NCBI_GP:WJG96834.1;Name=WJG96834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=PUW34_21310;product=DUF4156 domain-containing protein;protein_id=WJG96834.1;transl_table=11 CP118122.1 Genbank pseudogene 4410094 4410951 . - . ID=gene-PUW34_21315;Name=PUW34_21315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21315;pseudo=true CP118122.1 Protein Homology CDS 4410094 4410951 . - 0 ID=cds-PUW34_21315;Parent=gene-PUW34_21315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=PUW34_21315;product=YjeJ family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4411233 4412261 . - . ID=gene-PUW34_21320;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=PUW34_21320 CP118122.1 Protein Homology CDS 4411233 4412261 . - 0 ID=cds-WJG96835.1;Parent=gene-PUW34_21320;Dbxref=NCBI_GP:WJG96835.1;Name=WJG96835.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=PUW34_21320;product=EF-P beta-lysylation protein EpmB;protein_id=WJG96835.1;transl_table=11 CP118122.1 Genbank gene 4412302 4412868 . + . ID=gene-PUW34_21325;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=PUW34_21325 CP118122.1 Protein Homology CDS 4412302 4412868 . + 0 ID=cds-WJG96836.1;Parent=gene-PUW34_21325;Dbxref=NCBI_GP:WJG96836.1;Name=WJG96836.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=PUW34_21325;product=elongation factor P;protein_id=WJG96836.1;transl_table=11 CP118122.1 Genbank gene 4412929 4413063 . + . ID=gene-PUW34_21330;Name=PUW34_21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21330 CP118122.1 Protein Homology CDS 4412929 4413063 . + 0 ID=cds-WJG99065.1;Parent=gene-PUW34_21330;Dbxref=NCBI_GP:WJG99065.1;Name=WJG99065.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=PUW34_21330;product=entericidin A/B family lipoprotein;protein_id=WJG99065.1;transl_table=11 CP118122.1 Genbank gene 4413171 4413317 . + . ID=gene-PUW34_21335;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=PUW34_21335 CP118122.1 Protein Homology CDS 4413171 4413317 . + 0 ID=cds-WJG96837.1;Parent=gene-PUW34_21335;Dbxref=NCBI_GP:WJG96837.1;Name=WJG96837.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=PUW34_21335;product=lipoprotein toxin entericidin B;protein_id=WJG96837.1;transl_table=11 CP118122.1 Genbank gene 4413348 4413935 . - . ID=gene-PUW34_21340;Name=PUW34_21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21340 CP118122.1 Protein Homology CDS 4413348 4413935 . - 0 ID=cds-WJG96838.1;Parent=gene-PUW34_21340;Dbxref=NCBI_GP:WJG96838.1;Name=WJG96838.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=PUW34_21340;product=LuxR C-terminal-related transcriptional regulator;protein_id=WJG96838.1;transl_table=11 CP118122.1 Genbank gene 4414192 4414509 . + . ID=gene-PUW34_21345;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=PUW34_21345 CP118122.1 Protein Homology CDS 4414192 4414509 . + 0 ID=cds-WJG96839.1;Parent=gene-PUW34_21345;Dbxref=NCBI_GP:WJG96839.1;Name=WJG96839.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=PUW34_21345;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WJG96839.1;transl_table=11 CP118122.1 Genbank gene 4414526 4415059 . - . ID=gene-PUW34_21350;Name=PUW34_21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21350 CP118122.1 Protein Homology CDS 4414526 4415059 . - 0 ID=cds-WJG96840.1;Parent=gene-PUW34_21350;Dbxref=NCBI_GP:WJG96840.1;Name=WJG96840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=PUW34_21350;product=lipocalin family protein;protein_id=WJG96840.1;transl_table=11 CP118122.1 Genbank pseudogene 4415171 4415529 . - . ID=gene-PUW34_21355;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=pseudogene;locus_tag=PUW34_21355;pseudo=true CP118122.1 Protein Homology CDS 4415171 4415529 . - 0 ID=cds-PUW34_21355;Parent=gene-PUW34_21355;Note=frameshifted;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=PUW34_21355;product=fumarate reductase subunit FrdD;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4415540 4415935 . - . ID=gene-PUW34_21360;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=PUW34_21360 CP118122.1 Protein Homology CDS 4415540 4415935 . - 0 ID=cds-WJG96841.1;Parent=gene-PUW34_21360;Dbxref=NCBI_GP:WJG96841.1;Name=WJG96841.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=PUW34_21360;product=fumarate reductase subunit FrdC;protein_id=WJG96841.1;transl_table=11 CP118122.1 Genbank gene 4415946 4416680 . - . ID=gene-PUW34_21365;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=PUW34_21365 CP118122.1 Protein Homology CDS 4415946 4416680 . - 0 ID=cds-WJG96842.1;Parent=gene-PUW34_21365;Dbxref=NCBI_GP:WJG96842.1;Name=WJG96842.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=PUW34_21365;product=fumarate reductase iron-sulfur protein;protein_id=WJG96842.1;transl_table=11 CP118122.1 Genbank gene 4416673 4418463 . - . ID=gene-PUW34_21370;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=PUW34_21370 CP118122.1 Protein Homology CDS 4416673 4418463 . - 0 ID=cds-WJG96843.1;Parent=gene-PUW34_21370;Dbxref=NCBI_GP:WJG96843.1;Name=WJG96843.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=PUW34_21370;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WJG96843.1;transl_table=11 CP118122.1 Genbank gene 4418786 4419763 . + . ID=gene-PUW34_21375;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=PUW34_21375 CP118122.1 Protein Homology CDS 4418786 4419763 . + 0 ID=cds-WJG96844.1;Parent=gene-PUW34_21375;Dbxref=NCBI_GP:WJG96844.1;Name=WJG96844.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=PUW34_21375;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WJG96844.1;transl_table=11 CP118122.1 Genbank gene 4419989 4421491 . + . ID=gene-PUW34_21380;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=PUW34_21380 CP118122.1 Protein Homology CDS 4419989 4421491 . + 0 ID=cds-WJG96845.1;Parent=gene-PUW34_21380;Dbxref=NCBI_GP:WJG96845.1;Name=WJG96845.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=PUW34_21380;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WJG96845.1;transl_table=11 CP118122.1 Genbank gene 4421543 4421857 . + . ID=gene-PUW34_21385;Name=PUW34_21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21385 CP118122.1 Protein Homology CDS 4421543 4421857 . + 0 ID=cds-WJG96846.1;Parent=gene-PUW34_21385;Dbxref=NCBI_GP:WJG96846.1;Name=WJG96846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463210.1;locus_tag=PUW34_21385;product=YjeO family protein;protein_id=WJG96846.1;transl_table=11 CP118122.1 Genbank gene 4421924 4425250 . - . ID=gene-PUW34_21390;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=PUW34_21390 CP118122.1 Protein Homology CDS 4421924 4425250 . - 0 ID=cds-WJG96847.1;Parent=gene-PUW34_21390;Dbxref=NCBI_GP:WJG96847.1;Name=WJG96847.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=PUW34_21390;product=miniconductance mechanosensitive channel MscM;protein_id=WJG96847.1;transl_table=11 CP118122.1 Genbank gene 4425269 4426237 . - . ID=gene-PUW34_21395;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PUW34_21395 CP118122.1 Protein Homology CDS 4425269 4426237 . - 0 ID=cds-WJG96848.1;Parent=gene-PUW34_21395;Dbxref=NCBI_GP:WJG96848.1;Name=WJG96848.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=PUW34_21395;product=archaetidylserine decarboxylase;protein_id=WJG96848.1;transl_table=11 CP118122.1 Genbank gene 4426329 4427381 . - . ID=gene-PUW34_21400;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=PUW34_21400 CP118122.1 Protein Homology CDS 4426329 4427381 . - 0 ID=cds-WJG96849.1;Parent=gene-PUW34_21400;Dbxref=NCBI_GP:WJG96849.1;Name=WJG96849.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=PUW34_21400;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WJG96849.1;transl_table=11 CP118122.1 Genbank gene 4427488 4428033 . + . ID=gene-PUW34_21405;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=PUW34_21405 CP118122.1 Protein Homology CDS 4427488 4428033 . + 0 ID=cds-WJG96850.1;Parent=gene-PUW34_21405;Dbxref=NCBI_GP:WJG96850.1;Name=WJG96850.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=PUW34_21405;product=oligoribonuclease;protein_id=WJG96850.1;transl_table=11 CP118122.1 Genbank gene 4428095 4428835 . - . ID=gene-PUW34_21410;Name=PUW34_21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21410 CP118122.1 Protein Homology CDS 4428095 4428835 . - 0 ID=cds-WJG96851.1;Parent=gene-PUW34_21410;Dbxref=NCBI_GP:WJG96851.1;Name=WJG96851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=PUW34_21410;product=arginine ABC transporter substrate-binding protein;protein_id=WJG96851.1;transl_table=11 CP118122.1 Genbank gene 4429134 4429209 . + . ID=gene-PUW34_21415;Name=PUW34_21415;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_21415 CP118122.1 tRNAscan-SE tRNA 4429134 4429209 . + . ID=rna-PUW34_21415;Parent=gene-PUW34_21415;anticodon=(pos:4429167..4429169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_21415;product=tRNA-Gly CP118122.1 tRNAscan-SE exon 4429134 4429209 . + . ID=exon-PUW34_21415-1;Parent=rna-PUW34_21415;anticodon=(pos:4429167..4429169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_21415;product=tRNA-Gly CP118122.1 Genbank gene 4429366 4429441 . + . ID=gene-PUW34_21420;Name=PUW34_21420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_21420 CP118122.1 tRNAscan-SE tRNA 4429366 4429441 . + . ID=rna-PUW34_21420;Parent=gene-PUW34_21420;anticodon=(pos:4429399..4429401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_21420;product=tRNA-Gly CP118122.1 tRNAscan-SE exon 4429366 4429441 . + . ID=exon-PUW34_21420-1;Parent=rna-PUW34_21420;anticodon=(pos:4429399..4429401);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_21420;product=tRNA-Gly CP118122.1 Genbank gene 4429598 4429673 . + . ID=gene-PUW34_21425;Name=PUW34_21425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_21425 CP118122.1 tRNAscan-SE tRNA 4429598 4429673 . + . ID=rna-PUW34_21425;Parent=gene-PUW34_21425;anticodon=(pos:4429631..4429633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_21425;product=tRNA-Gly CP118122.1 tRNAscan-SE exon 4429598 4429673 . + . ID=exon-PUW34_21425-1;Parent=rna-PUW34_21425;anticodon=(pos:4429631..4429633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_21425;product=tRNA-Gly CP118122.1 Genbank gene 4429943 4431082 . - . ID=gene-PUW34_21430;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=PUW34_21430 CP118122.1 Protein Homology CDS 4429943 4431082 . - 0 ID=cds-WJG96852.1;Parent=gene-PUW34_21430;Dbxref=NCBI_GP:WJG96852.1;Name=WJG96852.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=PUW34_21430;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WJG96852.1;transl_table=11 CP118122.1 Genbank pseudogene 4431081 4432627 . + . ID=gene-PUW34_21435;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=pseudogene;locus_tag=PUW34_21435;pseudo=true CP118122.1 Protein Homology CDS 4431081 4432627 . + 0 ID=cds-PUW34_21435;Parent=gene-PUW34_21435;Note=frameshifted;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=PUW34_21435;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4432599 4433060 . + . ID=gene-PUW34_21440;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=PUW34_21440 CP118122.1 Protein Homology CDS 4432599 4433060 . + 0 ID=cds-WJG96853.1;Parent=gene-PUW34_21440;Dbxref=NCBI_GP:WJG96853.1;Name=WJG96853.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=PUW34_21440;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WJG96853.1;transl_table=11 CP118122.1 Genbank gene 4433077 4434396 . + . ID=gene-PUW34_21445;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=PUW34_21445 CP118122.1 Protein Homology CDS 4433077 4434396 . + 0 ID=cds-WJG96854.1;Parent=gene-PUW34_21445;Dbxref=NCBI_GP:WJG96854.1;Name=WJG96854.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=PUW34_21445;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WJG96854.1;transl_table=11 CP118122.1 Genbank gene 4434406 4436262 . + . ID=gene-PUW34_21450;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=PUW34_21450 CP118122.1 Protein Homology CDS 4434406 4436262 . + 0 ID=cds-WJG96855.1;Parent=gene-PUW34_21450;Dbxref=NCBI_GP:WJG96855.1;Name=WJG96855.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=PUW34_21450;product=DNA mismatch repair endonuclease MutL;protein_id=WJG96855.1;transl_table=11 CP118122.1 Genbank gene 4436255 4437205 . + . ID=gene-PUW34_21455;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=PUW34_21455 CP118122.1 Protein Homology CDS 4436255 4437205 . + 0 ID=cds-WJG96856.1;Parent=gene-PUW34_21455;Dbxref=NCBI_GP:WJG96856.1;Name=WJG96856.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=PUW34_21455;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WJG96856.1;transl_table=11 CP118122.1 Genbank gene 4437288 4437596 . + . ID=gene-PUW34_21460;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=PUW34_21460 CP118122.1 Protein Homology CDS 4437288 4437596 . + 0 ID=cds-WJG96857.1;Parent=gene-PUW34_21460;Dbxref=NCBI_GP:WJG96857.1;Name=WJG96857.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=PUW34_21460;product=RNA chaperone Hfq;protein_id=WJG96857.1;transl_table=11 CP118122.1 Genbank gene 4437668 4438948 . + . ID=gene-PUW34_21465;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PUW34_21465 CP118122.1 Protein Homology CDS 4437668 4438948 . + 0 ID=cds-WJG96858.1;Parent=gene-PUW34_21465;Dbxref=NCBI_GP:WJG96858.1;Name=WJG96858.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=PUW34_21465;product=GTPase HflX;protein_id=WJG96858.1;transl_table=11 CP118122.1 Genbank gene 4439163 4440422 . + . ID=gene-PUW34_21470;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=PUW34_21470 CP118122.1 Protein Homology CDS 4439163 4440422 . + 0 ID=cds-WJG96859.1;Parent=gene-PUW34_21470;Dbxref=NCBI_GP:WJG96859.1;Name=WJG96859.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=PUW34_21470;product=FtsH protease activity modulator HflK;protein_id=WJG96859.1;transl_table=11 CP118122.1 Genbank gene 4440425 4441429 . + . ID=gene-PUW34_21475;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=PUW34_21475 CP118122.1 Protein Homology CDS 4440425 4441429 . + 0 ID=cds-WJG96860.1;Parent=gene-PUW34_21475;Dbxref=NCBI_GP:WJG96860.1;Name=WJG96860.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=PUW34_21475;product=protease modulator HflC;protein_id=WJG96860.1;transl_table=11 CP118122.1 Genbank gene 4441508 4441705 . + . ID=gene-PUW34_21480;Name=PUW34_21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21480 CP118122.1 Protein Homology CDS 4441508 4441705 . + 0 ID=cds-WJG96861.1;Parent=gene-PUW34_21480;Dbxref=NCBI_GP:WJG96861.1;Name=WJG96861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=PUW34_21480;product=DUF2065 family protein;protein_id=WJG96861.1;transl_table=11 CP118122.1 Genbank gene 4441808 4443106 . + . ID=gene-PUW34_21485;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=PUW34_21485 CP118122.1 Protein Homology CDS 4441808 4443106 . + 0 ID=cds-WJG96862.1;Parent=gene-PUW34_21485;Dbxref=NCBI_GP:WJG96862.1;Name=WJG96862.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=PUW34_21485;product=adenylosuccinate synthase;protein_id=WJG96862.1;transl_table=11 CP118122.1 Genbank gene 4443314 4443739 . + . ID=gene-PUW34_21490;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=PUW34_21490 CP118122.1 Protein Homology CDS 4443314 4443739 . + 0 ID=cds-WJG96863.1;Parent=gene-PUW34_21490;Dbxref=NCBI_GP:WJG96863.1;Name=WJG96863.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=PUW34_21490;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WJG96863.1;transl_table=11 CP118122.1 Genbank gene 4443777 4446215 . + . ID=gene-PUW34_21495;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=PUW34_21495 CP118122.1 Protein Homology CDS 4443777 4446215 . + 0 ID=cds-WJG96864.1;Parent=gene-PUW34_21495;Dbxref=NCBI_GP:WJG96864.1;Name=WJG96864.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=PUW34_21495;product=ribonuclease R;protein_id=WJG96864.1;transl_table=11 CP118122.1 Genbank gene 4446306 4447037 . + . ID=gene-PUW34_21500;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=PUW34_21500 CP118122.1 Protein Homology CDS 4446306 4447037 . + 0 ID=cds-WJG96865.1;Parent=gene-PUW34_21500;Dbxref=NCBI_GP:WJG96865.1;Name=WJG96865.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=PUW34_21500;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WJG96865.1;transl_table=11 CP118122.1 Genbank gene 4447169 4447573 . + . ID=gene-PUW34_21505;Name=PUW34_21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21505 CP118122.1 Protein Homology CDS 4447169 4447573 . + 0 ID=cds-WJG96866.1;Parent=gene-PUW34_21505;Dbxref=NCBI_GP:WJG96866.1;Name=WJG96866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=PUW34_21505;product=DUF2170 family protein;protein_id=WJG96866.1;transl_table=11 CP118122.1 Genbank gene 4447588 4448286 . + . ID=gene-PUW34_21510;Name=PUW34_21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21510 CP118122.1 Protein Homology CDS 4447588 4448286 . + 0 ID=cds-WJG96867.1;Parent=gene-PUW34_21510;Dbxref=NCBI_GP:WJG96867.1;Name=WJG96867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=PUW34_21510;product=PspA/IM30 family protein;protein_id=WJG96867.1;transl_table=11 CP118122.1 Genbank gene 4448286 4449356 . + . ID=gene-PUW34_21515;Name=PUW34_21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21515 CP118122.1 Protein Homology CDS 4448286 4449356 . + 0 ID=cds-WJG96868.1;Parent=gene-PUW34_21515;Dbxref=NCBI_GP:WJG96868.1;Name=WJG96868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=PUW34_21515;product=ion channel;protein_id=WJG96868.1;transl_table=11 CP118122.1 Genbank gene 4449329 4450012 . + . ID=gene-PUW34_21520;Name=PUW34_21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21520 CP118122.1 Protein Homology CDS 4449329 4450012 . + 0 ID=cds-WJG96869.1;Parent=gene-PUW34_21520;Dbxref=NCBI_GP:WJG96869.1;Name=WJG96869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=PUW34_21520;product=YjfK family protein;protein_id=WJG96869.1;transl_table=11 CP118122.1 Genbank pseudogene 4450030 4450427 . + . ID=gene-PUW34_21525;Name=PUW34_21525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21525;pseudo=true CP118122.1 Protein Homology CDS 4450030 4450427 . + 0 ID=cds-PUW34_21525;Parent=gene-PUW34_21525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=PUW34_21525;product=DUF350 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4450437 4451075 . + . ID=gene-PUW34_21530;Name=PUW34_21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21530 CP118122.1 Protein Homology CDS 4450437 4451075 . + 0 ID=cds-WJG96870.1;Parent=gene-PUW34_21530;Dbxref=NCBI_GP:WJG96870.1;Name=WJG96870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=PUW34_21530;product=DUF1190 domain-containing protein;protein_id=WJG96870.1;transl_table=11 CP118122.1 Genbank gene 4451078 4452241 . + . ID=gene-PUW34_21535;Name=PUW34_21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21535 CP118122.1 Protein Homology CDS 4451078 4452241 . + 0 ID=cds-WJG96871.1;Parent=gene-PUW34_21535;Dbxref=NCBI_GP:WJG96871.1;Name=WJG96871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=PUW34_21535;product=glutathionylspermidine synthase family protein;protein_id=WJG96871.1;transl_table=11 CP118122.1 Genbank gene 4452326 4453948 . + . ID=gene-PUW34_21540;Name=PUW34_21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21540 CP118122.1 Protein Homology CDS 4452326 4453948 . + 0 ID=cds-WJG96872.1;Parent=gene-PUW34_21540;Dbxref=NCBI_GP:WJG96872.1;Name=WJG96872.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=PUW34_21540;product=isovaleryl-CoA dehydrogenase;protein_id=WJG96872.1;transl_table=11 CP118122.1 Genbank gene 4453993 4454268 . - . ID=gene-PUW34_21545;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=PUW34_21545 CP118122.1 Protein Homology CDS 4453993 4454268 . - 0 ID=cds-WJG96873.1;Parent=gene-PUW34_21545;Dbxref=NCBI_GP:WJG96873.1;Name=WJG96873.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=PUW34_21545;product=DUF1471 family protease activator YjfN;protein_id=WJG96873.1;transl_table=11 CP118122.1 Genbank gene 4454399 4454728 . - . ID=gene-PUW34_21550;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=PUW34_21550 CP118122.1 Protein Homology CDS 4454399 4454728 . - 0 ID=cds-WJG96874.1;Parent=gene-PUW34_21550;Dbxref=NCBI_GP:WJG96874.1;Name=WJG96874.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=PUW34_21550;product=biofilm peroxide resistance protein BsmA;protein_id=WJG96874.1;transl_table=11 CP118122.1 Genbank gene 4454912 4455454 . + . ID=gene-PUW34_21555;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=PUW34_21555 CP118122.1 Protein Homology CDS 4454912 4455454 . + 0 ID=cds-WJG96875.1;Parent=gene-PUW34_21555;Dbxref=NCBI_GP:WJG96875.1;Name=WJG96875.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF007857.0;locus_tag=PUW34_21555;product=esterase;protein_id=WJG96875.1;transl_table=11 CP118122.1 Genbank gene 4455505 4455660 . + . ID=gene-PUW34_21560;Name=PUW34_21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21560 CP118122.1 Protein Homology CDS 4455505 4455660 . + 0 ID=cds-WJG96876.1;Parent=gene-PUW34_21560;Dbxref=NCBI_GP:WJG96876.1;Name=WJG96876.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012546.2;locus_tag=PUW34_21560;product=hypothetical protein;protein_id=WJG96876.1;transl_table=11 CP118122.1 Genbank gene 4455657 4456412 . - . ID=gene-PUW34_21565;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=PUW34_21565 CP118122.1 Protein Homology CDS 4455657 4456412 . - 0 ID=cds-WJG96877.1;Parent=gene-PUW34_21565;Dbxref=NCBI_GP:WJG96877.1;Name=WJG96877.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=PUW34_21565;product=HTH-type transcriptional regulator UlaR;protein_id=WJG96877.1;transl_table=11 CP118122.1 Genbank gene 4456517 4457581 . - . ID=gene-PUW34_21570;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=PUW34_21570 CP118122.1 Protein Homology CDS 4456517 4457581 . - 0 ID=cds-WJG96878.1;Parent=gene-PUW34_21570;Dbxref=NCBI_GP:WJG96878.1;Name=WJG96878.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=PUW34_21570;product=L-ascorbate 6-phosphate lactonase;protein_id=WJG96878.1;transl_table=11 CP118122.1 Genbank gene 4457944 4459341 . + . ID=gene-PUW34_21575;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=PUW34_21575 CP118122.1 Protein Homology CDS 4457944 4459341 . + 0 ID=cds-WJG96879.1;Parent=gene-PUW34_21575;Dbxref=NCBI_GP:WJG96879.1;Name=WJG96879.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=PUW34_21575;product=PTS ascorbate transporter subunit IIC;protein_id=WJG96879.1;transl_table=11 CP118122.1 Genbank gene 4459357 4459662 . + . ID=gene-PUW34_21580;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=PUW34_21580 CP118122.1 Protein Homology CDS 4459357 4459662 . + 0 ID=cds-WJG96880.1;Parent=gene-PUW34_21580;Dbxref=NCBI_GP:WJG96880.1;Name=WJG96880.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=PUW34_21580;product=PTS ascorbate transporter subunit IIB;protein_id=WJG96880.1;transl_table=11 CP118122.1 Genbank pseudogene 4459672 4460135 . + . ID=gene-PUW34_21585;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=pseudogene;locus_tag=PUW34_21585;pseudo=true CP118122.1 Protein Homology CDS 4459672 4460135 . + 0 ID=cds-PUW34_21585;Parent=gene-PUW34_21585;Note=frameshifted;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=PUW34_21585;product=PTS ascorbate transporter subunit IIA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4460149 4460799 . + . ID=gene-PUW34_21590;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PUW34_21590 CP118122.1 Protein Homology CDS 4460149 4460799 . + 0 ID=cds-WJG96881.1;Parent=gene-PUW34_21590;Dbxref=NCBI_GP:WJG96881.1;Name=WJG96881.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=PUW34_21590;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WJG96881.1;transl_table=11 CP118122.1 Genbank gene 4460809 4461663 . + . ID=gene-PUW34_21595;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=PUW34_21595 CP118122.1 Protein Homology CDS 4460809 4461663 . + 0 ID=cds-WJG96882.1;Parent=gene-PUW34_21595;Dbxref=NCBI_GP:WJG96882.1;Name=WJG96882.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=PUW34_21595;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WJG96882.1;transl_table=11 CP118122.1 Genbank gene 4461663 4462349 . + . ID=gene-PUW34_21600;Name=PUW34_21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21600 CP118122.1 Protein Homology CDS 4461663 4462349 . + 0 ID=cds-WJG96883.1;Parent=gene-PUW34_21600;Dbxref=NCBI_GP:WJG96883.1;Name=WJG96883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=PUW34_21600;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJG96883.1;transl_table=11 CP118122.1 Genbank gene 4462478 4462753 . - . ID=gene-PUW34_21605;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=PUW34_21605 CP118122.1 Protein Homology CDS 4462478 4462753 . - 0 ID=cds-WJG99066.1;Parent=gene-PUW34_21605;Dbxref=NCBI_GP:WJG99066.1;Name=WJG99066.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463250.1;locus_tag=PUW34_21605;product=DUF1471 family protein YjfY;protein_id=WJG99066.1;transl_table=11 CP118122.1 Genbank pseudogene 4462947 4463152 . + . ID=gene-PUW34_21610;Name=PUW34_21610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21610;pseudo=true CP118122.1 Protein Homology CDS 4462947 4463152 . + 0 ID=cds-PUW34_21610;Parent=gene-PUW34_21610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=PUW34_21610;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4463223 4463618 . + . ID=gene-PUW34_21615;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=PUW34_21615 CP118122.1 Protein Homology CDS 4463223 4463618 . + 0 ID=cds-WJG96884.1;Parent=gene-PUW34_21615;Dbxref=NCBI_GP:WJG96884.1;Name=WJG96884.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=PUW34_21615;product=30S ribosomal protein S6;protein_id=WJG96884.1;transl_table=11 CP118122.1 Genbank gene 4463625 4463939 . + . ID=gene-PUW34_21620;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=PUW34_21620 CP118122.1 Protein Homology CDS 4463625 4463939 . + 0 ID=cds-WJG96885.1;Parent=gene-PUW34_21620;Dbxref=NCBI_GP:WJG96885.1;Name=WJG96885.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=PUW34_21620;product=primosomal replication protein N;protein_id=WJG96885.1;transl_table=11 CP118122.1 Genbank gene 4463944 4464171 . + . ID=gene-PUW34_21625;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=PUW34_21625 CP118122.1 Protein Homology CDS 4463944 4464171 . + 0 ID=cds-WJG96886.1;Parent=gene-PUW34_21625;Dbxref=NCBI_GP:WJG96886.1;Name=WJG96886.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=PUW34_21625;product=30S ribosomal protein S18;protein_id=WJG96886.1;transl_table=11 CP118122.1 Genbank gene 4464213 4464662 . + . ID=gene-PUW34_21630;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=PUW34_21630 CP118122.1 Protein Homology CDS 4464213 4464662 . + 0 ID=cds-WJG96887.1;Parent=gene-PUW34_21630;Dbxref=NCBI_GP:WJG96887.1;Name=WJG96887.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=PUW34_21630;product=50S ribosomal protein L9;protein_id=WJG96887.1;transl_table=11 CP118122.1 Genbank pseudogene 4464810 4465735 . + . ID=gene-PUW34_21635;Name=PUW34_21635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21635;pseudo=true CP118122.1 Protein Homology CDS 4464810 4465735 . + 0 ID=cds-PUW34_21635;Parent=gene-PUW34_21635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=PUW34_21635;product=DMT family transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4465785 4466420 . - . ID=gene-PUW34_21640;Name=PUW34_21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21640 CP118122.1 Protein Homology CDS 4465785 4466420 . - 0 ID=cds-WJG96888.1;Parent=gene-PUW34_21640;Dbxref=NCBI_GP:WJG96888.1;Name=WJG96888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=PUW34_21640;product=OapA family protein;protein_id=WJG96888.1;transl_table=11 CP118122.1 Genbank gene 4466640 4467260 . + . ID=gene-PUW34_21645;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=PUW34_21645 CP118122.1 Protein Homology CDS 4466640 4467260 . + 0 ID=cds-WJG96889.1;Parent=gene-PUW34_21645;Dbxref=NCBI_GP:WJG96889.1;Name=WJG96889.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=PUW34_21645;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJG96889.1;transl_table=11 CP118122.1 Genbank gene 4467556 4468959 . + . ID=gene-PUW34_21650;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=PUW34_21650 CP118122.1 Protein Homology CDS 4467556 4468959 . + 0 ID=cds-WJG96890.1;Parent=gene-PUW34_21650;Dbxref=NCBI_GP:WJG96890.1;Name=WJG96890.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541380.1;locus_tag=PUW34_21650;product=D-serine/D-alanine/glycine transporter;protein_id=WJG96890.1;transl_table=11 CP118122.1 Genbank gene 4469297 4470436 . + . ID=gene-PUW34_21655;Name=PUW34_21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21655 CP118122.1 Protein Homology CDS 4469297 4470436 . + 0 ID=cds-WJG96891.1;Parent=gene-PUW34_21655;Dbxref=NCBI_GP:WJG96891.1;Name=WJG96891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155541.1;locus_tag=PUW34_21655;product=DKNYY domain-containing protein;protein_id=WJG96891.1;transl_table=11 CP118122.1 Genbank gene 4470451 4471839 . + . ID=gene-PUW34_21660;Name=PUW34_21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21660 CP118122.1 Protein Homology CDS 4470451 4471839 . + 0 ID=cds-WJG96892.1;Parent=gene-PUW34_21660;Dbxref=NCBI_GP:WJG96892.1;Name=WJG96892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944334.1;locus_tag=PUW34_21660;product=hypothetical protein;protein_id=WJG96892.1;transl_table=11 CP118122.1 Genbank gene 4471906 4472568 . - . ID=gene-PUW34_21665;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=PUW34_21665 CP118122.1 Protein Homology CDS 4471906 4472568 . - 0 ID=cds-WJG96893.1;Parent=gene-PUW34_21665;Dbxref=NCBI_GP:WJG96893.1;Name=WJG96893.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=PUW34_21665;product=iron-sulfur cluster repair protein YtfE;protein_id=WJG96893.1;transl_table=11 CP118122.1 Genbank pseudogene 4472671 4473635 . - . ID=gene-PUW34_21670;Name=PUW34_21670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21670;pseudo=true CP118122.1 Protein Homology CDS 4472671 4473635 . - 0 ID=cds-PUW34_21670;Parent=gene-PUW34_21670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=PUW34_21670;product=DMT family transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4473716 4474564 . - . ID=gene-PUW34_21675;Name=PUW34_21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21675 CP118122.1 Protein Homology CDS 4473716 4474564 . - 0 ID=cds-WJG96894.1;Parent=gene-PUW34_21675;Dbxref=NCBI_GP:WJG96894.1;Name=WJG96894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=PUW34_21675;product=SDR family oxidoreductase;protein_id=WJG96894.1;transl_table=11 CP118122.1 Genbank gene 4474652 4475038 . + . ID=gene-PUW34_21680;Name=PUW34_21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21680 CP118122.1 Protein Homology CDS 4474652 4475038 . + 0 ID=cds-WJG96895.1;Parent=gene-PUW34_21680;Dbxref=NCBI_GP:WJG96895.1;Name=WJG96895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=PUW34_21680;product=helix-turn-helix domain-containing protein;protein_id=WJG96895.1;transl_table=11 CP118122.1 Genbank gene 4475096 4477039 . - . ID=gene-PUW34_21685;Name=PUW34_21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21685 CP118122.1 Protein Homology CDS 4475096 4477039 . - 0 ID=cds-WJG96896.1;Parent=gene-PUW34_21685;Dbxref=NCBI_GP:WJG96896.1;Name=WJG96896.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=PUW34_21685;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WJG96896.1;transl_table=11 CP118122.1 Genbank gene 4477307 4478047 . + . ID=gene-PUW34_21690;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=PUW34_21690 CP118122.1 Protein Homology CDS 4477307 4478047 . + 0 ID=cds-WJG96897.1;Parent=gene-PUW34_21690;Dbxref=NCBI_GP:WJG96897.1;Name=WJG96897.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=PUW34_21690;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WJG96897.1;transl_table=11 CP118122.1 Genbank gene 4478037 4478594 . - . ID=gene-PUW34_21695;Name=PUW34_21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21695 CP118122.1 Protein Homology CDS 4478037 4478594 . - 0 ID=cds-WJG96898.1;Parent=gene-PUW34_21695;Dbxref=NCBI_GP:WJG96898.1;Name=WJG96898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=PUW34_21695;product=YtfJ family protein;protein_id=WJG96898.1;transl_table=11 CP118122.1 Genbank gene 4478921 4479127 . + . ID=gene-PUW34_21700;Name=PUW34_21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21700 CP118122.1 Protein Homology CDS 4478921 4479127 . + 0 ID=cds-WJG96899.1;Parent=gene-PUW34_21700;Dbxref=NCBI_GP:WJG96899.1;Name=WJG96899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=PUW34_21700;product=DUF1107 domain-containing protein;protein_id=WJG96899.1;transl_table=11 CP118122.1 Genbank gene 4479212 4480555 . - . ID=gene-PUW34_21705;Name=PUW34_21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21705 CP118122.1 Protein Homology CDS 4479212 4480555 . - 0 ID=cds-WJG96900.1;Parent=gene-PUW34_21705;Dbxref=NCBI_GP:WJG96900.1;Name=WJG96900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=PUW34_21705;product=hemolysin family protein;protein_id=WJG96900.1;transl_table=11 CP118122.1 Genbank gene 4480738 4481376 . - . ID=gene-PUW34_21710;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=PUW34_21710 CP118122.1 Protein Homology CDS 4480738 4481376 . - 0 ID=cds-WJG96901.1;Parent=gene-PUW34_21710;Dbxref=NCBI_GP:WJG96901.1;Name=WJG96901.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=PUW34_21710;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WJG96901.1;transl_table=11 CP118122.1 Genbank gene 4481589 4483322 . + . ID=gene-PUW34_21715;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=PUW34_21715 CP118122.1 Protein Homology CDS 4481589 4483322 . + 0 ID=cds-WJG96902.1;Parent=gene-PUW34_21715;Dbxref=NCBI_GP:WJG96902.1;Name=WJG96902.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=PUW34_21715;product=autotransporter assembly complex protein TamA;protein_id=WJG96902.1;transl_table=11 CP118122.1 Genbank gene 4483319 4487098 . + . ID=gene-PUW34_21720;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=PUW34_21720 CP118122.1 Protein Homology CDS 4483319 4487098 . + 0 ID=cds-WJG96903.1;Parent=gene-PUW34_21720;Dbxref=NCBI_GP:WJG96903.1;Name=WJG96903.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=PUW34_21720;product=autotransporter assembly complex protein TamB;protein_id=WJG96903.1;transl_table=11 CP118122.1 Genbank gene 4487101 4487445 . + . ID=gene-PUW34_21725;Name=PUW34_21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21725 CP118122.1 Protein Homology CDS 4487101 4487445 . + 0 ID=cds-WJG96904.1;Parent=gene-PUW34_21725;Dbxref=NCBI_GP:WJG96904.1;Name=WJG96904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=PUW34_21725;product=gamma-glutamylcyclotransferase;protein_id=WJG96904.1;transl_table=11 CP118122.1 Genbank gene 4487499 4488218 . - . ID=gene-PUW34_21730;Name=PUW34_21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21730 CP118122.1 Protein Homology CDS 4487499 4488218 . - 0 ID=cds-WJG96905.1;Parent=gene-PUW34_21730;Dbxref=NCBI_GP:WJG96905.1;Name=WJG96905.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PUW34_21730;product=MFS transporter;protein_id=WJG96905.1;transl_table=11 CP118122.1 Genbank pseudogene 4488116 4488661 . - . ID=gene-PUW34_21735;Name=PUW34_21735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21735;pseudo=true CP118122.1 Protein Homology CDS 4488116 4488661 . - 0 ID=cds-PUW34_21735;Parent=gene-PUW34_21735;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PUW34_21735;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4488700 4489863 . - . ID=gene-PUW34_21740;Name=PUW34_21740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21740;pseudo=true CP118122.1 Protein Homology CDS 4488700 4489863 . - 0 ID=cds-PUW34_21740;Parent=gene-PUW34_21740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=PUW34_21740;product=metallo-dependent hydrolase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4490273 4490803 . - . ID=gene-PUW34_21745;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=PUW34_21745 CP118122.1 Protein Homology CDS 4490273 4490803 . - 0 ID=cds-WJG96906.1;Parent=gene-PUW34_21745;Dbxref=NCBI_GP:WJG96906.1;Name=WJG96906.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=PUW34_21745;product=inorganic diphosphatase;protein_id=WJG96906.1;transl_table=11 CP118122.1 Genbank gene 4491030 4492028 . - . ID=gene-PUW34_21750;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=PUW34_21750 CP118122.1 Protein Homology CDS 4491030 4492028 . - 0 ID=cds-WJG96907.1;Parent=gene-PUW34_21750;Dbxref=NCBI_GP:WJG96907.1;Name=WJG96907.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=PUW34_21750;product=class 1 fructose-bisphosphatase;protein_id=WJG96907.1;transl_table=11 CP118122.1 Genbank gene 4492203 4493576 . + . ID=gene-PUW34_21755;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=PUW34_21755 CP118122.1 Protein Homology CDS 4492203 4493576 . + 0 ID=cds-WJG96908.1;Parent=gene-PUW34_21755;Dbxref=NCBI_GP:WJG96908.1;Name=WJG96908.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=PUW34_21755;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WJG96908.1;transl_table=11 CP118122.1 Genbank gene 4493683 4494234 . - . ID=gene-PUW34_21760;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=PUW34_21760 CP118122.1 Protein Homology CDS 4493683 4494234 . - 0 ID=cds-WJG96909.1;Parent=gene-PUW34_21760;Dbxref=NCBI_GP:WJG96909.1;Name=WJG96909.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=PUW34_21760;product=ribosome biogenesis factor YjgA;protein_id=WJG96909.1;transl_table=11 CP118122.1 Genbank gene 4494330 4495682 . + . ID=gene-PUW34_21765;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=PUW34_21765 CP118122.1 Protein Homology CDS 4494330 4495682 . + 0 ID=cds-WJG96910.1;Parent=gene-PUW34_21765;Dbxref=NCBI_GP:WJG96910.1;Name=WJG96910.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=PUW34_21765;product=metalloprotease PmbA;protein_id=WJG96910.1;transl_table=11 CP118122.1 Genbank gene 4495781 4496167 . + . ID=gene-PUW34_21770;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=PUW34_21770 CP118122.1 Protein Homology CDS 4495781 4496167 . + 0 ID=cds-WJG96911.1;Parent=gene-PUW34_21770;Dbxref=NCBI_GP:WJG96911.1;Name=WJG96911.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=PUW34_21770;product=cytochrome b562;protein_id=WJG96911.1;transl_table=11 CP118122.1 Genbank gene 4496445 4496783 . + . ID=gene-PUW34_21775;Name=PUW34_21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21775 CP118122.1 Protein Homology CDS 4496445 4496783 . + 0 ID=cds-WJG96912.1;Parent=gene-PUW34_21775;Dbxref=NCBI_GP:WJG96912.1;Name=WJG96912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=PUW34_21775;product=glycine dehydrogenase;protein_id=WJG96912.1;transl_table=11 CP118122.1 Genbank pseudogene 4496794 4497155 . + . ID=gene-PUW34_21780;Name=PUW34_21780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21780;pseudo=true CP118122.1 Protein Homology CDS 4496794 4497155 . + 0 ID=cds-PUW34_21780;Parent=gene-PUW34_21780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=PUW34_21780;product=SFCGS family glycine-rich protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4497155 4497457 . + . ID=gene-PUW34_21785;Name=PUW34_21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21785 CP118122.1 Protein Homology CDS 4497155 4497457 . + 0 ID=cds-WJG96913.1;Parent=gene-PUW34_21785;Dbxref=NCBI_GP:WJG96913.1;Name=WJG96913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=PUW34_21785;product=DUF4312 family protein;protein_id=WJG96913.1;transl_table=11 CP118122.1 Genbank pseudogene 4497480 4498255 . + . ID=gene-PUW34_21790;Name=PUW34_21790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21790;pseudo=true CP118122.1 Protein Homology CDS 4497480 4498255 . + 0 ID=cds-PUW34_21790;Parent=gene-PUW34_21790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=PUW34_21790;product=DUF4311 domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4498267 4498911 . + . ID=gene-PUW34_21795;Name=PUW34_21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21795 CP118122.1 Protein Homology CDS 4498267 4498911 . + 0 ID=cds-WJG96914.1;Parent=gene-PUW34_21795;Dbxref=NCBI_GP:WJG96914.1;Name=WJG96914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=PUW34_21795;product=DUF4310 family protein;protein_id=WJG96914.1;transl_table=11 CP118122.1 Genbank gene 4498970 4500103 . + . ID=gene-PUW34_21800;Name=PUW34_21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21800 CP118122.1 Protein Homology CDS 4498970 4500103 . + 0 ID=cds-WJG96915.1;Parent=gene-PUW34_21800;Dbxref=NCBI_GP:WJG96915.1;Name=WJG96915.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=PUW34_21800;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WJG96915.1;transl_table=11 CP118122.1 Genbank gene 4500087 4501205 . + . ID=gene-PUW34_21805;Name=PUW34_21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21805 CP118122.1 Protein Homology CDS 4500087 4501205 . + 0 ID=cds-WJG96916.1;Parent=gene-PUW34_21805;Dbxref=NCBI_GP:WJG96916.1;Name=WJG96916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=PUW34_21805;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WJG96916.1;transl_table=11 CP118122.1 Genbank pseudogene 4501202 4501942 . + . ID=gene-PUW34_21810;Name=PUW34_21810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21810;pseudo=true CP118122.1 Protein Homology CDS 4501202 4501942 . + 0 ID=cds-PUW34_21810;Parent=gene-PUW34_21810;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=PUW34_21810;product=KDGP aldolase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4501959 4503872 . + . ID=gene-PUW34_21815;Name=PUW34_21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21815 CP118122.1 Protein Homology CDS 4501959 4503872 . + 0 ID=cds-WJG96917.1;Parent=gene-PUW34_21815;Dbxref=NCBI_GP:WJG96917.1;Name=WJG96917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=PUW34_21815;product=BglG family transcription antiterminator;protein_id=WJG96917.1;transl_table=11 CP118122.1 Genbank gene 4503950 4504192 . + . ID=gene-PUW34_21820;Name=PUW34_21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21820 CP118122.1 Protein Homology CDS 4503950 4504192 . + 0 ID=cds-WJG96918.1;Parent=gene-PUW34_21820;Dbxref=NCBI_GP:WJG96918.1;Name=WJG96918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=PUW34_21820;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WJG96918.1;transl_table=11 CP118122.1 Genbank gene 4504182 4504466 . + . ID=gene-PUW34_21825;Name=PUW34_21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21825 CP118122.1 Protein Homology CDS 4504182 4504466 . + 0 ID=cds-WJG96919.1;Parent=gene-PUW34_21825;Dbxref=NCBI_GP:WJG96919.1;Name=WJG96919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=PUW34_21825;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG96919.1;transl_table=11 CP118122.1 Genbank gene 4504470 4504934 . - . ID=gene-PUW34_21830;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=PUW34_21830 CP118122.1 Protein Homology CDS 4504470 4504934 . - 0 ID=cds-WJG96920.1;Parent=gene-PUW34_21830;Dbxref=NCBI_GP:WJG96920.1;Name=WJG96920.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=PUW34_21830;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WJG96920.1;transl_table=11 CP118122.1 Genbank gene 4505056 4507194 . - . ID=gene-PUW34_21835;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=PUW34_21835 CP118122.1 Protein Homology CDS 4505056 4507194 . - 0 ID=cds-WJG96921.1;Parent=gene-PUW34_21835;Dbxref=NCBI_GP:WJG96921.1;Name=WJG96921.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=PUW34_21835;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WJG96921.1;transl_table=11 CP118122.1 Genbank pseudogene 4507603 4509251 . - . ID=gene-PUW34_21840;Name=treC;gbkey=Gene;gene=treC;gene_biotype=pseudogene;locus_tag=PUW34_21840;pseudo=true CP118122.1 Protein Homology CDS 4507603 4509251 . - 0 ID=cds-PUW34_21840;Parent=gene-PUW34_21840;Note=frameshifted;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=PUW34_21840;product=alpha%2Calpha-phosphotrehalase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4509301 4510719 . - . ID=gene-PUW34_21845;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=PUW34_21845 CP118122.1 Protein Homology CDS 4509301 4510719 . - 0 ID=cds-WJG96922.1;Parent=gene-PUW34_21845;Dbxref=NCBI_GP:WJG96922.1;Name=WJG96922.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=PUW34_21845;product=PTS trehalose transporter subunit IIBC;protein_id=WJG96922.1;transl_table=11 CP118122.1 Genbank gene 4510857 4511804 . - . ID=gene-PUW34_21850;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=PUW34_21850 CP118122.1 Protein Homology CDS 4510857 4511804 . - 0 ID=cds-WJG96923.1;Parent=gene-PUW34_21850;Dbxref=NCBI_GP:WJG96923.1;Name=WJG96923.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=PUW34_21850;product=trehalose operon repressor TreR;protein_id=WJG96923.1;transl_table=11 CP118122.1 Genbank gene 4512188 4514896 . + . ID=gene-PUW34_21855;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PUW34_21855 CP118122.1 Protein Homology CDS 4512188 4514896 . + 0 ID=cds-WJG99067.1;Parent=gene-PUW34_21855;Dbxref=NCBI_GP:WJG99067.1;Name=WJG99067.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=PUW34_21855;product=magnesium-translocating P-type ATPase;protein_id=WJG99067.1;transl_table=11 CP118122.1 Genbank pseudogene 4515012 4515458 . - . ID=gene-PUW34_21860;Name=PUW34_21860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21860;pseudo=true CP118122.1 Protein Homology CDS 4515012 4515458 . - 0 ID=cds-PUW34_21860;Parent=gene-PUW34_21860;Note=internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=PUW34_21860;product=transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4515533 4515919 . - . ID=gene-PUW34_21865;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=PUW34_21865 CP118122.1 Protein Homology CDS 4515533 4515919 . - 0 ID=cds-WJG96924.1;Parent=gene-PUW34_21865;Dbxref=NCBI_GP:WJG96924.1;Name=WJG96924.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=PUW34_21865;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WJG96924.1;transl_table=11 CP118122.1 Genbank gene 4515996 4516457 . - . ID=gene-PUW34_21870;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=PUW34_21870 CP118122.1 Protein Homology CDS 4515996 4516457 . - 0 ID=cds-WJG96925.1;Parent=gene-PUW34_21870;Dbxref=NCBI_GP:WJG96925.1;Name=WJG96925.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=PUW34_21870;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WJG96925.1;transl_table=11 CP118122.1 Genbank gene 4516470 4517405 . - . ID=gene-PUW34_21875;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=PUW34_21875 CP118122.1 Protein Homology CDS 4516470 4517405 . - 0 ID=cds-WJG96926.1;Parent=gene-PUW34_21875;Dbxref=NCBI_GP:WJG96926.1;Name=WJG96926.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=PUW34_21875;product=aspartate carbamoyltransferase;protein_id=WJG96926.1;transl_table=11 CP118122.1 Genbank gene 4517441 4517542 . - . ID=gene-PUW34_21880;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=PUW34_21880 CP118122.1 Protein Homology CDS 4517441 4517542 . - 0 ID=cds-WJG96927.1;Parent=gene-PUW34_21880;Dbxref=NCBI_GP:WJG96927.1;Name=WJG96927.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=PUW34_21880;product=pyr operon leader peptide;protein_id=WJG96927.1;transl_table=11 CP118122.1 Genbank pseudogene 4517522 4517663 . + . ID=gene-PUW34_21885;Name=PUW34_21885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_21885;pseudo=true CP118122.1 Protein Homology CDS 4517522 4517663 . + 0 ID=cds-PUW34_21885;Parent=gene-PUW34_21885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=PUW34_21885;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4517633 4518121 . - . ID=gene-PUW34_21890;Name=PUW34_21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21890 CP118122.1 Protein Homology CDS 4517633 4518121 . - 0 ID=cds-WJG96928.1;Parent=gene-PUW34_21890;Dbxref=NCBI_GP:WJG96928.1;Name=WJG96928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=PUW34_21890;product=arginine repressor;protein_id=WJG96928.1;transl_table=11 CP118122.1 Genbank gene 4518308 4519711 . - . ID=gene-PUW34_21895;Name=PUW34_21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21895 CP118122.1 Protein Homology CDS 4518308 4519711 . - 0 ID=cds-WJG96929.1;Parent=gene-PUW34_21895;Dbxref=NCBI_GP:WJG96929.1;Name=WJG96929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=PUW34_21895;product=YfcC family protein;protein_id=WJG96929.1;transl_table=11 CP118122.1 Genbank gene 4519767 4520771 . - . ID=gene-PUW34_21900;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PUW34_21900 CP118122.1 Protein Homology CDS 4519767 4520771 . - 0 ID=cds-WJG96930.1;Parent=gene-PUW34_21900;Dbxref=NCBI_GP:WJG96930.1;Name=WJG96930.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=PUW34_21900;product=ornithine carbamoyltransferase;protein_id=WJG96930.1;transl_table=11 CP118122.1 Genbank gene 4520883 4521815 . - . ID=gene-PUW34_21905;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=PUW34_21905 CP118122.1 Protein Homology CDS 4520883 4521815 . - 0 ID=cds-WJG96931.1;Parent=gene-PUW34_21905;Dbxref=NCBI_GP:WJG96931.1;Name=WJG96931.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=PUW34_21905;product=carbamate kinase;protein_id=WJG96931.1;transl_table=11 CP118122.1 Genbank pseudogene 4521826 4523046 . - . ID=gene-PUW34_21910;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=pseudogene;locus_tag=PUW34_21910;pseudo=true CP118122.1 Protein Homology CDS 4521826 4523046 . - 0 ID=cds-PUW34_21910;Parent=gene-PUW34_21910;Note=internal stop;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=PUW34_21910;product=arginine deiminase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4523705 4524157 . + . ID=gene-PUW34_21915;Name=PUW34_21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21915 CP118122.1 Protein Homology CDS 4523705 4524157 . + 0 ID=cds-WJG96932.1;Parent=gene-PUW34_21915;Dbxref=NCBI_GP:WJG96932.1;Name=WJG96932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=PUW34_21915;product=YhcH/YjgK/YiaL family protein;protein_id=WJG96932.1;transl_table=11 CP118122.1 Genbank gene 4524231 4525235 . - . ID=gene-PUW34_21920;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PUW34_21920 CP118122.1 Protein Homology CDS 4524231 4525235 . - 0 ID=cds-WJG96933.1;Parent=gene-PUW34_21920;Dbxref=NCBI_GP:WJG96933.1;Name=WJG96933.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=PUW34_21920;product=ornithine carbamoyltransferase;protein_id=WJG96933.1;transl_table=11 CP118122.1 Genbank gene 4525401 4525817 . + . ID=gene-PUW34_21925;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=PUW34_21925 CP118122.1 Protein Homology CDS 4525401 4525817 . + 0 ID=cds-WJG96934.1;Parent=gene-PUW34_21925;Dbxref=NCBI_GP:WJG96934.1;Name=WJG96934.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=PUW34_21925;product=ribonuclease E inhibitor RraB;protein_id=WJG96934.1;transl_table=11 CP118122.1 Genbank gene 4525829 4526641 . + . ID=gene-PUW34_21930;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=PUW34_21930 CP118122.1 Protein Homology CDS 4525829 4526641 . + 0 ID=cds-WJG96935.1;Parent=gene-PUW34_21930;Dbxref=NCBI_GP:WJG96935.1;Name=WJG96935.1;gbkey=CDS;gene=miaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=PUW34_21930;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WJG96935.1;transl_table=11 CP118122.1 Genbank gene 4526875 4527363 . - . ID=gene-PUW34_21935;Name=PUW34_21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21935 CP118122.1 Protein Homology CDS 4526875 4527363 . - 0 ID=cds-WJG96936.1;Parent=gene-PUW34_21935;Dbxref=NCBI_GP:WJG96936.1;Name=WJG96936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=PUW34_21935;product=DUF3617 domain-containing protein;protein_id=WJG96936.1;transl_table=11 CP118122.1 Genbank gene 4527470 4527973 . - . ID=gene-PUW34_21940;Name=PUW34_21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21940 CP118122.1 Protein Homology CDS 4527470 4527973 . - 0 ID=cds-WJG96937.1;Parent=gene-PUW34_21940;Dbxref=NCBI_GP:WJG96937.1;Name=WJG96937.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=PUW34_21940;product=GNAT family N-acetyltransferase;protein_id=WJG96937.1;transl_table=11 CP118122.1 Genbank gene 4528168 4529355 . + . ID=gene-PUW34_21945;Name=PUW34_21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21945 CP118122.1 Protein Homology CDS 4528168 4529355 . + 0 ID=cds-WJG96938.1;Parent=gene-PUW34_21945;Dbxref=NCBI_GP:WJG96938.1;Name=WJG96938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=PUW34_21945;product=YjgN family protein;protein_id=WJG96938.1;transl_table=11 CP118122.1 Genbank gene 4529497 4532352 . - . ID=gene-PUW34_21950;Name=PUW34_21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21950 CP118122.1 Protein Homology CDS 4529497 4532352 . - 0 ID=cds-WJG96939.1;Parent=gene-PUW34_21950;Dbxref=NCBI_GP:WJG96939.1;Name=WJG96939.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=PUW34_21950;product=valine--tRNA ligase;protein_id=WJG96939.1;transl_table=11 CP118122.1 Genbank gene 4532352 4532795 . - . ID=gene-PUW34_21955;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=PUW34_21955 CP118122.1 Protein Homology CDS 4532352 4532795 . - 0 ID=cds-WJG99068.1;Parent=gene-PUW34_21955;Dbxref=NCBI_GP:WJG99068.1;Name=WJG99068.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=PUW34_21955;product=DNA polymerase III subunit chi;protein_id=WJG99068.1;transl_table=11 CP118122.1 Genbank gene 4532932 4534443 . - . ID=gene-PUW34_21960;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=PUW34_21960 CP118122.1 Protein Homology CDS 4532932 4534443 . - 0 ID=cds-WJG96940.1;Parent=gene-PUW34_21960;Dbxref=NCBI_GP:WJG96940.1;Name=WJG96940.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=PUW34_21960;product=leucyl aminopeptidase;protein_id=WJG96940.1;transl_table=11 CP118122.1 Genbank gene 4534668 4534718 . + . ID=gene-PUW34_21965;Name=PUW34_21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21965 CP118122.1 Protein Homology CDS 4534668 4534718 . + 0 ID=cds-WJG99069.1;Parent=gene-PUW34_21965;Dbxref=NCBI_GP:WJG99069.1;Name=WJG99069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=PUW34_21965;product=hypothetical protein;protein_id=WJG99069.1;transl_table=11 CP118122.1 Genbank gene 4534781 4535881 . + . ID=gene-PUW34_21970;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=PUW34_21970 CP118122.1 Protein Homology CDS 4534781 4535881 . + 0 ID=cds-WJG96941.1;Parent=gene-PUW34_21970;Dbxref=NCBI_GP:WJG96941.1;Name=WJG96941.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=PUW34_21970;product=LPS export ABC transporter permease LptF;protein_id=WJG96941.1;transl_table=11 CP118122.1 Genbank pseudogene 4535881 4536962 . + . ID=gene-PUW34_21975;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=pseudogene;locus_tag=PUW34_21975;pseudo=true CP118122.1 Protein Homology CDS 4535881 4536962 . + 0 ID=cds-PUW34_21975;Parent=gene-PUW34_21975;Note=frameshifted;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=PUW34_21975;product=LPS export ABC transporter permease LptG;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4537168 4538166 . - . ID=gene-PUW34_21980;Name=PUW34_21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_21980 CP118122.1 Protein Homology CDS 4537168 4538166 . - 0 ID=cds-WJG96942.1;Parent=gene-PUW34_21980;Dbxref=NCBI_GP:WJG96942.1;Name=WJG96942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=PUW34_21980;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG96942.1;transl_table=11 CP118122.1 Genbank gene 4538230 4539549 . - . ID=gene-PUW34_21985;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=PUW34_21985 CP118122.1 Protein Homology CDS 4538230 4539549 . - 0 ID=cds-WJG96943.1;Parent=gene-PUW34_21985;Dbxref=NCBI_GP:WJG96943.1;Name=WJG96943.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=PUW34_21985;product=gnt-II system L-idonate transporter;protein_id=WJG96943.1;transl_table=11 CP118122.1 Genbank gene 4539611 4540375 . - . ID=gene-PUW34_21990;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=PUW34_21990 CP118122.1 Protein Homology CDS 4539611 4540375 . - 0 ID=cds-WJG96944.1;Parent=gene-PUW34_21990;Dbxref=NCBI_GP:WJG96944.1;Name=WJG96944.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=PUW34_21990;product=gluconate 5-dehydrogenase;protein_id=WJG96944.1;transl_table=11 CP118122.1 Genbank gene 4540400 4541431 . - . ID=gene-PUW34_21995;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=PUW34_21995 CP118122.1 Protein Homology CDS 4540400 4541431 . - 0 ID=cds-WJG96945.1;Parent=gene-PUW34_21995;Dbxref=NCBI_GP:WJG96945.1;Name=WJG96945.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=PUW34_21995;product=L-idonate 5-dehydrogenase;protein_id=WJG96945.1;transl_table=11 CP118122.1 Genbank gene 4541648 4542178 . + . ID=gene-PUW34_22000;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=PUW34_22000 CP118122.1 Protein Homology CDS 4541648 4542178 . + 0 ID=cds-WJG96946.1;Parent=gene-PUW34_22000;Dbxref=NCBI_GP:WJG96946.1;Name=WJG96946.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=PUW34_22000;product=gluconokinase;protein_id=WJG96946.1;transl_table=11 CP118122.1 Genbank gene 4542206 4543225 . - . ID=gene-PUW34_22005;Name=PUW34_22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22005 CP118122.1 Protein Homology CDS 4542206 4543225 . - 0 ID=cds-WJG96947.1;Parent=gene-PUW34_22005;Dbxref=NCBI_GP:WJG96947.1;Name=WJG96947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=PUW34_22005;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WJG96947.1;transl_table=11 CP118122.1 Genbank gene 4543448 4543532 . + . ID=gene-PUW34_22010;Name=PUW34_22010;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_22010 CP118122.1 tRNAscan-SE tRNA 4543448 4543532 . + . ID=rna-PUW34_22010;Parent=gene-PUW34_22010;anticodon=(pos:4543482..4543484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_22010;product=tRNA-Leu CP118122.1 tRNAscan-SE exon 4543448 4543532 . + . ID=exon-PUW34_22010-1;Parent=rna-PUW34_22010;anticodon=(pos:4543482..4543484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_22010;product=tRNA-Leu CP118122.1 Genbank gene 4543982 4544527 . + . ID=gene-PUW34_22015;Name=PUW34_22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22015 CP118122.1 Protein Homology CDS 4543982 4544527 . + 0 ID=cds-WJG99070.1;Parent=gene-PUW34_22015;Dbxref=NCBI_GP:WJG99070.1;Name=WJG99070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=PUW34_22015;product=helix-turn-helix domain-containing protein;protein_id=WJG99070.1;transl_table=11 CP118122.1 Genbank gene 4544604 4544852 . + . ID=gene-PUW34_22020;Name=PUW34_22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22020 CP118122.1 Protein Homology CDS 4544604 4544852 . + 0 ID=cds-WJG96948.1;Parent=gene-PUW34_22020;Dbxref=NCBI_GP:WJG96948.1;Name=WJG96948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168389.1;locus_tag=PUW34_22020;product=ribbon-helix-helix domain-containing protein;protein_id=WJG96948.1;transl_table=11 CP118122.1 Genbank gene 4544961 4545200 . + . ID=gene-PUW34_22025;Name=PUW34_22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22025 CP118122.1 Protein Homology CDS 4544961 4545200 . + 0 ID=cds-WJG96949.1;Parent=gene-PUW34_22025;Dbxref=NCBI_GP:WJG96949.1;Name=WJG96949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=PUW34_22025;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WJG96949.1;transl_table=11 CP118122.1 Genbank gene 4545203 4545511 . + . ID=gene-PUW34_22030;Name=PUW34_22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22030 CP118122.1 Protein Homology CDS 4545203 4545511 . + 0 ID=cds-WJG96950.1;Parent=gene-PUW34_22030;Dbxref=NCBI_GP:WJG96950.1;Name=WJG96950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=PUW34_22030;product=CcdB family protein;protein_id=WJG96950.1;transl_table=11 CP118122.1 Genbank pseudogene 4545917 4546057 . + . ID=gene-PUW34_22035;Name=PUW34_22035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22035;pseudo=true CP118122.1 Protein Homology CDS 4545917 4546057 . + 0 ID=cds-PUW34_22035;Parent=gene-PUW34_22035;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322911.1;locus_tag=PUW34_22035;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4546089 4547222 . - . ID=gene-PUW34_22040;Name=PUW34_22040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22040;pseudo=true CP118122.1 Protein Homology CDS 4546089 4547222 . - 0 ID=cds-PUW34_22040;Parent=gene-PUW34_22040;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW34_22040;product=IS3 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4547577 4548074 . + . ID=gene-PUW34_22045;Name=sefA;gbkey=Gene;gene=sefA;gene_biotype=protein_coding;locus_tag=PUW34_22045 CP118122.1 Protein Homology CDS 4547577 4548074 . + 0 ID=cds-WJG96951.1;Parent=gene-PUW34_22045;Dbxref=NCBI_GP:WJG96951.1;Name=WJG96951.1;gbkey=CDS;gene=sefA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674837.1;locus_tag=PUW34_22045;product=SEF14 fimbria major subunit SefA;protein_id=WJG96951.1;transl_table=11 CP118122.1 Genbank gene 4548196 4548936 . + . ID=gene-PUW34_22050;Name=sefB;gbkey=Gene;gene=sefB;gene_biotype=protein_coding;locus_tag=PUW34_22050 CP118122.1 Protein Homology CDS 4548196 4548936 . + 0 ID=cds-WJG96952.1;Parent=gene-PUW34_22050;Dbxref=NCBI_GP:WJG96952.1;Name=WJG96952.1;gbkey=CDS;gene=sefB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746655.1;locus_tag=PUW34_22050;product=SEF14/SEF18 fimbria chaperone SefB;protein_id=WJG96952.1;transl_table=11 CP118122.1 Genbank pseudogene 4548953 4551050 . + . ID=gene-PUW34_22055;Name=PUW34_22055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22055;pseudo=true CP118122.1 Protein Homology CDS 4548953 4551050 . + 0 ID=cds-PUW34_22055;Parent=gene-PUW34_22055;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF025320.2;locus_tag=PUW34_22055;product=FimD/PapC N-terminal domain-containing protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4551126 4551353 . + . ID=gene-PUW34_22060;Name=PUW34_22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22060 CP118122.1 Protein Homology CDS 4551126 4551353 . + 0 ID=cds-WJG99071.1;Parent=gene-PUW34_22060;Dbxref=NCBI_GP:WJG99071.1;Name=WJG99071.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025319.2;locus_tag=PUW34_22060;product=FimD/PapC C-terminal domain-containing protein;protein_id=WJG99071.1;transl_table=11 CP118122.1 Genbank gene 4551393 4551608 . + . ID=gene-PUW34_22065;Name=PUW34_22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22065 CP118122.1 GeneMarkS-2+ CDS 4551393 4551608 . + 0 ID=cds-WJG96953.1;Parent=gene-PUW34_22065;Dbxref=NCBI_GP:WJG96953.1;Name=WJG96953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_22065;product=hypothetical protein;protein_id=WJG96953.1;transl_table=11 CP118122.1 Genbank gene 4551641 4551838 . + . ID=gene-PUW34_22070;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=PUW34_22070 CP118122.1 Protein Homology CDS 4551641 4551838 . + 0 ID=cds-WJG99072.1;Parent=gene-PUW34_22070;Dbxref=NCBI_GP:WJG99072.1;Name=WJG99072.1;gbkey=CDS;gene=afaD;inference=COORDINATES: protein motif:HMM:NF017581.2;locus_tag=PUW34_22070;product=AfaD family invasin;protein_id=WJG99072.1;transl_table=11 CP118122.1 Genbank gene 4551872 4552687 . - . ID=gene-PUW34_22075;Name=PUW34_22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22075 CP118122.1 Protein Homology CDS 4551872 4552687 . - 0 ID=cds-WJG96954.1;Parent=gene-PUW34_22075;Dbxref=NCBI_GP:WJG96954.1;Name=WJG96954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723051.1;locus_tag=PUW34_22075;product=helix-turn-helix transcriptional regulator;protein_id=WJG96954.1;transl_table=11 CP118122.1 Genbank gene 4553264 4553473 . + . ID=gene-PUW34_22080;Name=pefI;gbkey=Gene;gene=pefI;gene_biotype=protein_coding;locus_tag=PUW34_22080 CP118122.1 Protein Homology CDS 4553264 4553473 . + 0 ID=cds-WJG96955.1;Parent=gene-PUW34_22080;Dbxref=NCBI_GP:WJG96955.1;Name=WJG96955.1;gbkey=CDS;gene=pefI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490505.1;locus_tag=PUW34_22080;product=transcriptional regulator PefI;protein_id=WJG96955.1;transl_table=11 CP118122.1 Genbank gene 4553458 4553808 . + . ID=gene-PUW34_22085;Name=PUW34_22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22085 CP118122.1 Protein Homology CDS 4553458 4553808 . + 0 ID=cds-WJG96956.1;Parent=gene-PUW34_22085;Dbxref=NCBI_GP:WJG96956.1;Name=WJG96956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490504.1;locus_tag=PUW34_22085;product=helix-turn-helix transcriptional regulator;protein_id=WJG96956.1;transl_table=11 CP118122.1 Genbank gene 4554053 4554706 . + . ID=gene-PUW34_22090;Name=PUW34_22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22090 CP118122.1 Protein Homology CDS 4554053 4554706 . + 0 ID=cds-WJG96957.1;Parent=gene-PUW34_22090;Dbxref=NCBI_GP:WJG96957.1;Name=WJG96957.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490503.1;locus_tag=PUW34_22090;product=DsbA family protein;protein_id=WJG96957.1;transl_table=11 CP118122.1 Genbank gene 4554696 4554842 . + . ID=gene-PUW34_22095;Name=PUW34_22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22095 CP118122.1 Protein Homology CDS 4554696 4554842 . + 0 ID=cds-WJG96958.1;Parent=gene-PUW34_22095;Dbxref=NCBI_GP:WJG96958.1;Name=WJG96958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141719.1;locus_tag=PUW34_22095;product=hypothetical protein;protein_id=WJG96958.1;transl_table=11 CP118122.1 Genbank gene 4554893 4555738 . + . ID=gene-PUW34_22100;Name=PUW34_22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22100 CP118122.1 Protein Homology CDS 4554893 4555738 . + 0 ID=cds-WJG96959.1;Parent=gene-PUW34_22100;Dbxref=NCBI_GP:WJG96959.1;Name=WJG96959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526839.1;locus_tag=PUW34_22100;product=YjiK family protein;protein_id=WJG96959.1;transl_table=11 CP118122.1 Genbank pseudogene 4556001 4557111 . + . ID=gene-PUW34_22105;Name=PUW34_22105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22105;pseudo=true CP118122.1 Protein Homology CDS 4556001 4557111 . + 0 ID=cds-PUW34_22105;Parent=gene-PUW34_22105;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=PUW34_22105;product=IS3 family transposase;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4557367 4558242 . + . ID=gene-PUW34_22110;Name=PUW34_22110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22110;pseudo=true CP118122.1 Protein Homology CDS 4557367 4558242 . + 0 ID=cds-PUW34_22110;Parent=gene-PUW34_22110;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=PUW34_22110;product=HNH endonuclease;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4558722 4559438 . - . ID=gene-PUW34_22115;Name=PUW34_22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22115 CP118122.1 Protein Homology CDS 4558722 4559438 . - 0 ID=cds-WJG96960.1;Parent=gene-PUW34_22115;Dbxref=NCBI_GP:WJG96960.1;Name=WJG96960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=PUW34_22115;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WJG96960.1;transl_table=11 CP118122.1 Genbank gene 4559998 4561629 . - . ID=gene-PUW34_22120;Name=PUW34_22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22120 CP118122.1 Protein Homology CDS 4559998 4561629 . - 0 ID=cds-WJG96961.1;Parent=gene-PUW34_22120;Dbxref=NCBI_GP:WJG96961.1;Name=WJG96961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=PUW34_22120;product=class I SAM-dependent methyltransferase;protein_id=WJG96961.1;transl_table=11 CP118122.1 Genbank gene 4561634 4561891 . - . ID=gene-PUW34_22125;Name=PUW34_22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22125 CP118122.1 Protein Homology CDS 4561634 4561891 . - 0 ID=cds-WJG96962.1;Parent=gene-PUW34_22125;Dbxref=NCBI_GP:WJG96962.1;Name=WJG96962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=PUW34_22125;product=YjhX family toxin;protein_id=WJG96962.1;transl_table=11 CP118122.1 Genbank gene 4562379 4562987 . + . ID=gene-PUW34_22130;Name=PUW34_22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22130 CP118122.1 Protein Homology CDS 4562379 4562987 . + 0 ID=cds-WJG96963.1;Parent=gene-PUW34_22130;Dbxref=NCBI_GP:WJG96963.1;Name=WJG96963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=PUW34_22130;product=DUF1062 domain-containing protein;protein_id=WJG96963.1;transl_table=11 CP118122.1 Genbank pseudogene 4563339 4564225 . + . ID=gene-PUW34_22135;Name=PUW34_22135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22135;pseudo=true CP118122.1 Protein Homology CDS 4563339 4564225 . + 0 ID=cds-PUW34_22135;Parent=gene-PUW34_22135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=PUW34_22135;product=hypothetical protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4564472 4564891 . + . ID=gene-PUW34_22140;Name=PUW34_22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22140 CP118122.1 Protein Homology CDS 4564472 4564891 . + 0 ID=cds-WJG96964.1;Parent=gene-PUW34_22140;Dbxref=NCBI_GP:WJG96964.1;Name=WJG96964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=PUW34_22140;product=DUF302 domain-containing protein;protein_id=WJG96964.1;transl_table=11 CP118122.1 Genbank gene 4564908 4565573 . - . ID=gene-PUW34_22145;Name=PUW34_22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22145 CP118122.1 Protein Homology CDS 4564908 4565573 . - 0 ID=cds-WJG96965.1;Parent=gene-PUW34_22145;Dbxref=NCBI_GP:WJG96965.1;Name=WJG96965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588696.1;locus_tag=PUW34_22145;product=dienelactone hydrolase family protein;protein_id=WJG96965.1;transl_table=11 CP118122.1 Genbank gene 4565923 4566696 . + . ID=gene-PUW34_22150;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=PUW34_22150 CP118122.1 Protein Homology CDS 4565923 4566696 . + 0 ID=cds-WJG96966.1;Parent=gene-PUW34_22150;Dbxref=NCBI_GP:WJG96966.1;Name=WJG96966.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=PUW34_22150;product=Uxu operon transcriptional regulator;protein_id=WJG96966.1;transl_table=11 CP118122.1 Genbank pseudogene 4566697 4567709 . - . ID=gene-PUW34_22155;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=pseudogene;locus_tag=PUW34_22155;pseudo=true CP118122.1 Protein Homology CDS 4566697 4567709 . - 0 ID=cds-PUW34_22155;Parent=gene-PUW34_22155;Note=frameshifted;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=PUW34_22155;product=tryptophan--tRNA ligase;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4568422 4568952 . + . ID=gene-PUW34_22160;Name=PUW34_22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22160 CP118122.1 Protein Homology CDS 4568422 4568952 . + 0 ID=cds-WJG96967.1;Parent=gene-PUW34_22160;Dbxref=NCBI_GP:WJG96967.1;Name=WJG96967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=PUW34_22160;product=Hcp family type VI secretion system effector;protein_id=WJG96967.1;transl_table=11 CP118122.1 Genbank pseudogene 4569191 4569926 . + . ID=gene-PUW34_22165;Name=PUW34_22165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22165;pseudo=true CP118122.1 Protein Homology CDS 4569191 4569926 . + 0 ID=cds-PUW34_22165;Parent=gene-PUW34_22165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=PUW34_22165;product=aspartate/glutamate racemase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4569932 4570840 . - . ID=gene-PUW34_22170;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=PUW34_22170 CP118122.1 Protein Homology CDS 4569932 4570840 . - 0 ID=cds-WJG96968.1;Parent=gene-PUW34_22170;Dbxref=NCBI_GP:WJG96968.1;Name=WJG96968.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=PUW34_22170;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WJG96968.1;transl_table=11 CP118122.1 Genbank gene 4570959 4572131 . - . ID=gene-PUW34_22175;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=PUW34_22175 CP118122.1 Protein Homology CDS 4570959 4572131 . - 0 ID=cds-WJG96969.1;Parent=gene-PUW34_22175;Dbxref=NCBI_GP:WJG96969.1;Name=WJG96969.1;Ontology_term=GO:0006508,GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=PUW34_22175;product=beta-aspartyl-peptidase;protein_id=WJG96969.1;transl_table=11 CP118122.1 Genbank gene 4572144 4572605 . - . ID=gene-PUW34_22180;Name=PUW34_22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22180 CP118122.1 Protein Homology CDS 4572144 4572605 . - 0 ID=cds-WJG96970.1;Parent=gene-PUW34_22180;Dbxref=NCBI_GP:WJG96970.1;Name=WJG96970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=PUW34_22180;product=YjiG family protein;protein_id=WJG96970.1;transl_table=11 CP118122.1 Genbank gene 4572602 4573273 . - . ID=gene-PUW34_22185;Name=PUW34_22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22185 CP118122.1 Protein Homology CDS 4572602 4573273 . - 0 ID=cds-WJG96971.1;Parent=gene-PUW34_22185;Dbxref=NCBI_GP:WJG96971.1;Name=WJG96971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068748.1;locus_tag=PUW34_22185;product=nucleoside recognition domain-containing protein;protein_id=WJG96971.1;transl_table=11 CP118122.1 Genbank pseudogene 4574146 4575329 . - . ID=gene-PUW34_22190;Name=PUW34_22190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22190;pseudo=true CP118122.1 Protein Homology CDS 4574146 4575329 . - 0 ID=cds-PUW34_22190;Parent=gene-PUW34_22190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=PUW34_22190;product=MFS transporter;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4575549 4576820 . - . ID=gene-PUW34_22195;Name=PUW34_22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22195 CP118122.1 Protein Homology CDS 4575549 4576820 . - 0 ID=cds-WJG96972.1;Parent=gene-PUW34_22195;Dbxref=NCBI_GP:WJG96972.1;Name=WJG96972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=PUW34_22195;product=DUF445 domain-containing protein;protein_id=WJG96972.1;transl_table=11 CP118122.1 Genbank gene 4576907 4578148 . - . ID=gene-PUW34_22200;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=PUW34_22200 CP118122.1 Protein Homology CDS 4576907 4578148 . - 0 ID=cds-WJG96973.1;Parent=gene-PUW34_22200;Dbxref=NCBI_GP:WJG96973.1;Name=WJG96973.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=PUW34_22200;product=multidrug efflux MFS transporter MdtM;protein_id=WJG96973.1;transl_table=11 CP118122.1 Genbank gene 4578627 4579580 . + . ID=gene-PUW34_22205;Name=PUW34_22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22205 CP118122.1 Protein Homology CDS 4578627 4579580 . + 0 ID=cds-WJG96974.1;Parent=gene-PUW34_22205;Dbxref=NCBI_GP:WJG96974.1;Name=WJG96974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=PUW34_22205;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG96974.1;transl_table=11 CP118122.1 Genbank pseudogene 4579761 4580204 . + . ID=gene-PUW34_22210;Name=PUW34_22210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22210;pseudo=true CP118122.1 Protein Homology CDS 4579761 4580204 . + 0 ID=cds-PUW34_22210;Parent=gene-PUW34_22210;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=PUW34_22210;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4580163 4581404 . - . ID=gene-PUW34_22215;Name=PUW34_22215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22215;pseudo=true CP118122.1 Protein Homology CDS 4580163 4581404 . - 0 ID=cds-PUW34_22215;Parent=gene-PUW34_22215;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461652.1;locus_tag=PUW34_22215;product=type I restriction endonuclease;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4581499 4582803 . - . ID=gene-PUW34_22220;Name=PUW34_22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22220 CP118122.1 Protein Homology CDS 4581499 4582803 . - 0 ID=cds-WJG96975.1;Parent=gene-PUW34_22220;Dbxref=NCBI_GP:WJG96975.1;Name=WJG96975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863532.1;locus_tag=PUW34_22220;product=type I restriction-modification protein specificity subunit;protein_id=WJG96975.1;transl_table=11 CP118122.1 Genbank gene 4582793 4584412 . - . ID=gene-PUW34_22225;Name=PUW34_22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22225 CP118122.1 Protein Homology CDS 4582793 4584412 . - 0 ID=cds-WJG96976.1;Parent=gene-PUW34_22225;Dbxref=NCBI_GP:WJG96976.1;Name=WJG96976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238256.1;locus_tag=PUW34_22225;product=class I SAM-dependent DNA methyltransferase;protein_id=WJG96976.1;transl_table=11 CP118122.1 Genbank pseudogene 4584476 4585642 . - . ID=gene-PUW34_22230;Name=PUW34_22230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22230;pseudo=true CP118122.1 Protein Homology CDS 4584476 4585642 . - 0 ID=cds-PUW34_22230;Parent=gene-PUW34_22230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800831.1;locus_tag=PUW34_22230;product=restriction endonuclease;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4585767 4585901 . + . ID=gene-PUW34_22235;Name=PUW34_22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22235 CP118122.1 Protein Homology CDS 4585767 4585901 . + 0 ID=cds-WJG96977.1;Parent=gene-PUW34_22235;Dbxref=NCBI_GP:WJG96977.1;Name=WJG96977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055725.1;locus_tag=PUW34_22235;product=hypothetical protein;protein_id=WJG96977.1;transl_table=11 CP118122.1 Genbank gene 4585933 4586760 . - . ID=gene-PUW34_22240;Name=PUW34_22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22240 CP118122.1 Protein Homology CDS 4585933 4586760 . - 0 ID=cds-WJG96978.1;Parent=gene-PUW34_22240;Dbxref=NCBI_GP:WJG96978.1;Name=WJG96978.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526846.1;locus_tag=PUW34_22240;product=N-6 DNA methylase;protein_id=WJG96978.1;transl_table=11 CP118122.1 Genbank gene 4587190 4587765 . - . ID=gene-PUW34_22245;Name=PUW34_22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22245 CP118122.1 Protein Homology CDS 4587190 4587765 . - 0 ID=cds-WJG99073.1;Parent=gene-PUW34_22245;Dbxref=NCBI_GP:WJG99073.1;Name=WJG99073.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539933.1;locus_tag=PUW34_22245;product=restriction endonuclease subunit S;protein_id=WJG99073.1;transl_table=11 CP118122.1 Genbank gene 4588378 4590219 . - . ID=gene-PUW34_22250;Name=PUW34_22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22250 CP118122.1 Protein Homology CDS 4588378 4590219 . - 0 ID=cds-WJG96979.1;Parent=gene-PUW34_22250;Dbxref=NCBI_GP:WJG96979.1;Name=WJG96979.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974638.1;locus_tag=PUW34_22250;product=3'-5' exonuclease;protein_id=WJG96979.1;transl_table=11 CP118122.1 Genbank gene 4590622 4590909 . + . ID=gene-PUW34_22255;Name=PUW34_22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22255 CP118122.1 Protein Homology CDS 4590622 4590909 . + 0 ID=cds-WJG96980.1;Parent=gene-PUW34_22255;Dbxref=NCBI_GP:WJG96980.1;Name=WJG96980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=PUW34_22255;product=BrnT family toxin;protein_id=WJG96980.1;transl_table=11 CP118122.1 Genbank gene 4590896 4591198 . + . ID=gene-PUW34_22260;Name=PUW34_22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22260 CP118122.1 Protein Homology CDS 4590896 4591198 . + 0 ID=cds-WJG96981.1;Parent=gene-PUW34_22260;Dbxref=NCBI_GP:WJG96981.1;Name=WJG96981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=PUW34_22260;product=BrnA antitoxin family protein;protein_id=WJG96981.1;transl_table=11 CP118122.1 Genbank gene 4591273 4592229 . - . ID=gene-PUW34_22265;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=PUW34_22265 CP118122.1 Protein Homology CDS 4591273 4592229 . - 0 ID=cds-WJG96982.1;Parent=gene-PUW34_22265;Dbxref=NCBI_GP:WJG96982.1;Name=WJG96982.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=PUW34_22265;product=GTPase;protein_id=WJG96982.1;transl_table=11 CP118122.1 Genbank gene 4592240 4592443 . - . ID=gene-PUW34_22270;Name=PUW34_22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22270 CP118122.1 Protein Homology CDS 4592240 4592443 . - 0 ID=cds-WJG96983.1;Parent=gene-PUW34_22270;Dbxref=NCBI_GP:WJG96983.1;Name=WJG96983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=PUW34_22270;product=YbdD/YjiX family protein;protein_id=WJG96983.1;transl_table=11 CP118122.1 Genbank gene 4592538 4594688 . - . ID=gene-PUW34_22275;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=PUW34_22275 CP118122.1 Protein Homology CDS 4592538 4594688 . - 0 ID=cds-WJG96984.1;Parent=gene-PUW34_22275;Dbxref=NCBI_GP:WJG96984.1;Name=WJG96984.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=PUW34_22275;product=pyruvate/proton symporter BtsT;protein_id=WJG96984.1;transl_table=11 CP118122.1 Genbank gene 4595055 4596716 . + . ID=gene-PUW34_22280;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=PUW34_22280 CP118122.1 Protein Homology CDS 4595055 4596716 . + 0 ID=cds-WJG96985.1;Parent=gene-PUW34_22280;Dbxref=NCBI_GP:WJG96985.1;Name=WJG96985.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=PUW34_22280;product=methyl-accepting chemotaxis protein;protein_id=WJG96985.1;transl_table=11 CP118122.1 Genbank gene 4597039 4599804 . + . ID=gene-PUW34_22285;Name=PUW34_22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22285 CP118122.1 Protein Homology CDS 4597039 4599804 . + 0 ID=cds-WJG96986.1;Parent=gene-PUW34_22285;Dbxref=NCBI_GP:WJG96986.1;Name=WJG96986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=PUW34_22285;product=sigma-54-dependent transcriptional regulator;protein_id=WJG96986.1;transl_table=11 CP118122.1 Genbank gene 4599906 4600328 . + . ID=gene-PUW34_22290;Name=PUW34_22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22290 CP118122.1 Protein Homology CDS 4599906 4600328 . + 0 ID=cds-WJG96987.1;Parent=gene-PUW34_22290;Dbxref=NCBI_GP:WJG96987.1;Name=WJG96987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=PUW34_22290;product=PTS sugar transporter subunit IIA;protein_id=WJG96987.1;transl_table=11 CP118122.1 Genbank gene 4600343 4600804 . + . ID=gene-PUW34_22295;Name=PUW34_22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22295 CP118122.1 Protein Homology CDS 4600343 4600804 . + 0 ID=cds-WJG96988.1;Parent=gene-PUW34_22295;Dbxref=NCBI_GP:WJG96988.1;Name=WJG96988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=PUW34_22295;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WJG96988.1;transl_table=11 CP118122.1 Genbank gene 4600830 4601609 . + . ID=gene-PUW34_22300;Name=PUW34_22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22300 CP118122.1 Protein Homology CDS 4600830 4601609 . + 0 ID=cds-WJG96989.1;Parent=gene-PUW34_22300;Dbxref=NCBI_GP:WJG96989.1;Name=WJG96989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=PUW34_22300;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WJG96989.1;transl_table=11 CP118122.1 Genbank gene 4601587 4602435 . + . ID=gene-PUW34_22305;Name=PUW34_22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22305 CP118122.1 Protein Homology CDS 4601587 4602435 . + 0 ID=cds-WJG96990.1;Parent=gene-PUW34_22305;Dbxref=NCBI_GP:WJG96990.1;Name=WJG96990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=PUW34_22305;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WJG96990.1;transl_table=11 CP118122.1 Genbank gene 4602448 4603506 . + . ID=gene-PUW34_22310;Name=PUW34_22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22310 CP118122.1 Protein Homology CDS 4602448 4603506 . + 0 ID=cds-WJG96991.1;Parent=gene-PUW34_22310;Dbxref=NCBI_GP:WJG96991.1;Name=WJG96991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=PUW34_22310;product=SIS domain-containing protein;protein_id=WJG96991.1;transl_table=11 CP118122.1 Genbank gene 4603524 4604534 . + . ID=gene-PUW34_22315;Name=PUW34_22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22315 CP118122.1 Protein Homology CDS 4603524 4604534 . + 0 ID=cds-WJG96992.1;Parent=gene-PUW34_22315;Dbxref=NCBI_GP:WJG96992.1;Name=WJG96992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=PUW34_22315;product=SIS domain-containing protein;protein_id=WJG96992.1;transl_table=11 CP118122.1 Genbank gene 4604668 4606959 . - . ID=gene-PUW34_22320;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=PUW34_22320 CP118122.1 Protein Homology CDS 4604668 4606959 . - 0 ID=cds-WJG96993.1;Parent=gene-PUW34_22320;Dbxref=NCBI_GP:WJG96993.1;Name=WJG96993.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465680.1;locus_tag=PUW34_22320;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WJG96993.1;transl_table=11 CP118122.1 Genbank gene 4607242 4607703 . - . ID=gene-PUW34_22325;Name=PUW34_22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22325 CP118122.1 Protein Homology CDS 4607242 4607703 . - 0 ID=cds-WJG96994.1;Parent=gene-PUW34_22325;Dbxref=NCBI_GP:WJG96994.1;Name=WJG96994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=PUW34_22325;product=DUF2501 domain-containing protein;protein_id=WJG96994.1;transl_table=11 CP118122.1 Genbank gene 4607761 4608498 . - . ID=gene-PUW34_22330;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=PUW34_22330 CP118122.1 Protein Homology CDS 4607761 4608498 . - 0 ID=cds-WJG96995.1;Parent=gene-PUW34_22330;Dbxref=NCBI_GP:WJG96995.1;Name=WJG96995.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=PUW34_22330;product=DNA replication protein DnaC;protein_id=WJG96995.1;transl_table=11 CP118122.1 Genbank gene 4608501 4609040 . - . ID=gene-PUW34_22335;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=PUW34_22335 CP118122.1 Protein Homology CDS 4608501 4609040 . - 0 ID=cds-WJG96996.1;Parent=gene-PUW34_22335;Dbxref=NCBI_GP:WJG96996.1;Name=WJG96996.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=PUW34_22335;product=primosomal protein DnaT;protein_id=WJG96996.1;transl_table=11 CP118122.1 Genbank gene 4609133 4609606 . - . ID=gene-PUW34_22340;Name=PUW34_22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22340 CP118122.1 Protein Homology CDS 4609133 4609606 . - 0 ID=cds-WJG96997.1;Parent=gene-PUW34_22340;Dbxref=NCBI_GP:WJG96997.1;Name=WJG96997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=PUW34_22340;product=threonine/serine exporter;protein_id=WJG96997.1;transl_table=11 CP118122.1 Genbank gene 4609597 4610373 . - . ID=gene-PUW34_22345;Name=PUW34_22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22345 CP118122.1 Protein Homology CDS 4609597 4610373 . - 0 ID=cds-WJG96998.1;Parent=gene-PUW34_22345;Dbxref=NCBI_GP:WJG96998.1;Name=WJG96998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=PUW34_22345;product=threonine/serine exporter ThrE family protein;protein_id=WJG96998.1;transl_table=11 CP118122.1 Genbank gene 4611086 4611811 . + . ID=gene-PUW34_22350;Name=PUW34_22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22350 CP118122.1 Protein Homology CDS 4611086 4611811 . + 0 ID=cds-WJG96999.1;Parent=gene-PUW34_22350;Dbxref=NCBI_GP:WJG96999.1;Name=WJG96999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=PUW34_22350;product=response regulator transcription factor;protein_id=WJG96999.1;transl_table=11 CP118122.1 Genbank gene 4611772 4612446 . + . ID=gene-PUW34_22355;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=PUW34_22355 CP118122.1 Protein Homology CDS 4611772 4612446 . + 0 ID=cds-WJG97000.1;Parent=gene-PUW34_22355;Dbxref=NCBI_GP:WJG97000.1;Name=WJG97000.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=PUW34_22355;product=DNA-binding transcriptional activator BglJ;protein_id=WJG97000.1;transl_table=11 CP118122.1 Genbank gene 4612497 4612955 . - . ID=gene-PUW34_22360;Name=PUW34_22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22360 CP118122.1 Protein Homology CDS 4612497 4612955 . - 0 ID=cds-WJG97001.1;Parent=gene-PUW34_22360;Dbxref=NCBI_GP:WJG97001.1;Name=WJG97001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=PUW34_22360;product=YbaK/EbsC family protein;protein_id=WJG97001.1;transl_table=11 CP118122.1 Genbank gene 4613114 4613902 . - . ID=gene-PUW34_22365;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=PUW34_22365 CP118122.1 Protein Homology CDS 4613114 4613902 . - 0 ID=cds-WJG97002.1;Parent=gene-PUW34_22365;Dbxref=NCBI_GP:WJG97002.1;Name=WJG97002.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=PUW34_22365;product=siderophore-iron reductase FhuF;protein_id=WJG97002.1;transl_table=11 CP118122.1 Genbank gene 4614023 4615087 . - . ID=gene-PUW34_22370;Name=PUW34_22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22370 CP118122.1 Protein Homology CDS 4614023 4615087 . - 0 ID=cds-WJG97003.1;Parent=gene-PUW34_22370;Dbxref=NCBI_GP:WJG97003.1;Name=WJG97003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=PUW34_22370;product=GGDEF domain-containing protein;protein_id=WJG97003.1;transl_table=11 CP118122.1 Genbank gene 4615338 4615574 . + . ID=gene-PUW34_22375;Name=PUW34_22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22375 CP118122.1 Protein Homology CDS 4615338 4615574 . + 0 ID=cds-WJG97004.1;Parent=gene-PUW34_22375;Dbxref=NCBI_GP:WJG97004.1;Name=WJG97004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=PUW34_22375;product=DUF1435 domain-containing protein;protein_id=WJG97004.1;transl_table=11 CP118122.1 Genbank gene 4615606 4615692 . - . ID=gene-PUW34_22380;Name=PUW34_22380;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW34_22380 CP118122.1 tRNAscan-SE tRNA 4615606 4615692 . - . ID=rna-PUW34_22380;Parent=gene-PUW34_22380;anticodon=(pos:complement(4615656..4615658));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_22380;product=tRNA-Leu CP118122.1 tRNAscan-SE exon 4615606 4615692 . - . ID=exon-PUW34_22380-1;Parent=rna-PUW34_22380;anticodon=(pos:complement(4615656..4615658));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW34_22380;product=tRNA-Leu CP118122.1 Genbank gene 4615883 4616911 . - . ID=gene-PUW34_22385;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=PUW34_22385 CP118122.1 Protein Homology CDS 4615883 4616911 . - 0 ID=cds-WJG97005.1;Parent=gene-PUW34_22385;Dbxref=NCBI_GP:WJG97005.1;Name=WJG97005.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=PUW34_22385;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WJG97005.1;transl_table=11 CP118122.1 Genbank gene 4617014 4617451 . + . ID=gene-PUW34_22390;Name=PUW34_22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22390 CP118122.1 Protein Homology CDS 4617014 4617451 . + 0 ID=cds-WJG97006.1;Parent=gene-PUW34_22390;Dbxref=NCBI_GP:WJG97006.1;Name=WJG97006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=PUW34_22390;product=DNA polymerase III subunit psi;protein_id=WJG97006.1;transl_table=11 CP118122.1 Genbank gene 4617396 4617842 . + . ID=gene-PUW34_22395;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=PUW34_22395 CP118122.1 Protein Homology CDS 4617396 4617842 . + 0 ID=cds-WJG97007.1;Parent=gene-PUW34_22395;Dbxref=NCBI_GP:WJG97007.1;Name=WJG97007.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=PUW34_22395;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WJG97007.1;transl_table=11 CP118122.1 Genbank gene 4617864 4618541 . + . ID=gene-PUW34_22400;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=PUW34_22400 CP118122.1 Protein Homology CDS 4617864 4618541 . + 0 ID=cds-WJG99074.1;Parent=gene-PUW34_22400;Dbxref=NCBI_GP:WJG99074.1;Name=WJG99074.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=PUW34_22400;product=pyrimidine 5'-nucleotidase;protein_id=WJG99074.1;transl_table=11 CP118122.1 Genbank gene 4618633 4620222 . + . ID=gene-PUW34_22405;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=PUW34_22405 CP118122.1 Protein Homology CDS 4618633 4620222 . + 0 ID=cds-WJG97008.1;Parent=gene-PUW34_22405;Dbxref=NCBI_GP:WJG97008.1;Name=WJG97008.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=PUW34_22405;product=peptide chain release factor 3;protein_id=WJG97008.1;transl_table=11 CP118122.1 Genbank gene 4620624 4621241 . + . ID=gene-PUW34_22410;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PUW34_22410 CP118122.1 Protein Homology CDS 4620624 4621241 . + 0 ID=cds-WJG97009.1;Parent=gene-PUW34_22410;Dbxref=NCBI_GP:WJG97009.1;Name=WJG97009.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=PUW34_22410;product=molecular chaperone OsmY;protein_id=WJG97009.1;transl_table=11 CP118122.1 Genbank gene 4621370 4621531 . + . ID=gene-PUW34_22415;Name=PUW34_22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22415 CP118122.1 Protein Homology CDS 4621370 4621531 . + 0 ID=cds-WJG97010.1;Parent=gene-PUW34_22415;Dbxref=NCBI_GP:WJG97010.1;Name=WJG97010.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=PUW34_22415;product=DUF1328 domain-containing protein;protein_id=WJG97010.1;transl_table=11 CP118122.1 Genbank gene 4621655 4622728 . + . ID=gene-PUW34_22420;Name=PUW34_22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22420 CP118122.1 Protein Homology CDS 4621655 4622728 . + 0 ID=cds-WJG99075.1;Parent=gene-PUW34_22420;Dbxref=NCBI_GP:WJG99075.1;Name=WJG99075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=PUW34_22420;product=patatin family protein;protein_id=WJG99075.1;transl_table=11 CP118122.1 Genbank gene 4622725 4623498 . + . ID=gene-PUW34_22425;Name=PUW34_22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22425 CP118122.1 Protein Homology CDS 4622725 4623498 . + 0 ID=cds-WJG97011.1;Parent=gene-PUW34_22425;Dbxref=NCBI_GP:WJG97011.1;Name=WJG97011.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=PUW34_22425;product=metal-dependent hydrolase;protein_id=WJG97011.1;transl_table=11 CP118122.1 Genbank gene 4623531 4624394 . - . ID=gene-PUW34_22430;Name=PUW34_22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22430 CP118122.1 Protein Homology CDS 4623531 4624394 . - 0 ID=cds-WJG97012.1;Parent=gene-PUW34_22430;Dbxref=NCBI_GP:WJG97012.1;Name=WJG97012.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=PUW34_22430;product=YjjW family glycine radical enzyme activase;protein_id=WJG97012.1;transl_table=11 CP118122.1 Genbank gene 4624366 4625916 . - . ID=gene-PUW34_22435;Name=PUW34_22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22435 CP118122.1 Protein Homology CDS 4624366 4625916 . - 0 ID=cds-WJG97013.1;Parent=gene-PUW34_22435;Dbxref=NCBI_GP:WJG97013.1;Name=WJG97013.1;Ontology_term=GO:0008150,GO:0003824,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=PUW34_22435;product=YjjI family glycine radical enzyme;protein_id=WJG97013.1;transl_table=11 CP118122.1 Genbank gene 4626176 4626955 . + . ID=gene-PUW34_22440;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=PUW34_22440 CP118122.1 Protein Homology CDS 4626176 4626955 . + 0 ID=cds-WJG97014.1;Parent=gene-PUW34_22440;Dbxref=NCBI_GP:WJG97014.1;Name=WJG97014.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=PUW34_22440;product=deoxyribose-phosphate aldolase;protein_id=WJG97014.1;transl_table=11 CP118122.1 Genbank gene 4627079 4628401 . + . ID=gene-PUW34_22445;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=PUW34_22445 CP118122.1 Protein Homology CDS 4627079 4628401 . + 0 ID=cds-WJG97015.1;Parent=gene-PUW34_22445;Dbxref=NCBI_GP:WJG97015.1;Name=WJG97015.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=PUW34_22445;product=thymidine phosphorylase;protein_id=WJG97015.1;transl_table=11 CP118122.1 Genbank gene 4628453 4629676 . + . ID=gene-PUW34_22450;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=PUW34_22450 CP118122.1 Protein Homology CDS 4628453 4629676 . + 0 ID=cds-WJG97016.1;Parent=gene-PUW34_22450;Dbxref=NCBI_GP:WJG97016.1;Name=WJG97016.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=PUW34_22450;product=phosphopentomutase;protein_id=WJG97016.1;transl_table=11 CP118122.1 Genbank gene 4629886 4630605 . + . ID=gene-PUW34_22455;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=PUW34_22455 CP118122.1 Protein Homology CDS 4629886 4630605 . + 0 ID=cds-WJG97017.1;Parent=gene-PUW34_22455;Dbxref=NCBI_GP:WJG97017.1;Name=WJG97017.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=PUW34_22455;product=purine-nucleoside phosphorylase;protein_id=WJG97017.1;transl_table=11 CP118122.1 Genbank pseudogene 4630784 4632105 . + . ID=gene-PUW34_22460;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=pseudogene;locus_tag=PUW34_22460;pseudo=true CP118122.1 Protein Homology CDS 4630784 4632105 . + 0 ID=cds-PUW34_22460;Parent=gene-PUW34_22460;Note=frameshifted;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=PUW34_22460;product=type II toxin-antitoxin system HipA family toxin YjjJ;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4632110 4633126 . - . ID=gene-PUW34_22465;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=PUW34_22465 CP118122.1 Protein Homology CDS 4632110 4633126 . - 0 ID=cds-WJG97018.1;Parent=gene-PUW34_22465;Dbxref=NCBI_GP:WJG97018.1;Name=WJG97018.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=PUW34_22465;product=lipoate--protein ligase LplA;protein_id=WJG97018.1;transl_table=11 CP118122.1 Genbank gene 4633160 4633804 . - . ID=gene-PUW34_22470;Name=PUW34_22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22470 CP118122.1 Protein Homology CDS 4633160 4633804 . - 0 ID=cds-WJG97019.1;Parent=gene-PUW34_22470;Dbxref=NCBI_GP:WJG97019.1;Name=WJG97019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=PUW34_22470;product=YtjB family periplasmic protein;protein_id=WJG97019.1;transl_table=11 CP118122.1 Genbank gene 4633921 4634889 . + . ID=gene-PUW34_22475;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PUW34_22475 CP118122.1 Protein Homology CDS 4633921 4634889 . + 0 ID=cds-WJG97020.1;Parent=gene-PUW34_22475;Dbxref=NCBI_GP:WJG97020.1;Name=WJG97020.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=PUW34_22475;product=phosphoserine phosphatase;protein_id=WJG97020.1;transl_table=11 CP118122.1 Genbank gene 4634973 4636355 . + . ID=gene-PUW34_22480;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=PUW34_22480 CP118122.1 Protein Homology CDS 4634973 4636355 . + 0 ID=cds-WJG97021.1;Parent=gene-PUW34_22480;Dbxref=NCBI_GP:WJG97021.1;Name=WJG97021.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=PUW34_22480;product=DNA repair protein RadA;protein_id=WJG97021.1;transl_table=11 CP118122.1 Genbank pseudogene 4636506 4637737 . + . ID=gene-PUW34_22485;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=pseudogene;locus_tag=PUW34_22485;pseudo=true CP118122.1 Protein Homology CDS 4636506 4637737 . + 0 ID=cds-PUW34_22485;Parent=gene-PUW34_22485;Note=frameshifted;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=PUW34_22485;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4637855 4639522 . - . ID=gene-PUW34_22490;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=PUW34_22490 CP118122.1 Protein Homology CDS 4637855 4639522 . - 0 ID=cds-WJG97022.1;Parent=gene-PUW34_22490;Dbxref=NCBI_GP:WJG97022.1;Name=WJG97022.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=PUW34_22490;product=energy-dependent translational throttle protein EttA;protein_id=WJG97022.1;transl_table=11 CP118122.1 Genbank gene 4639731 4641668 . + . ID=gene-PUW34_22495;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=PUW34_22495 CP118122.1 Protein Homology CDS 4639731 4641668 . + 0 ID=cds-WJG97023.1;Parent=gene-PUW34_22495;Dbxref=NCBI_GP:WJG97023.1;Name=WJG97023.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=PUW34_22495;product=murein transglycosylase;protein_id=WJG97023.1;transl_table=11 CP118122.1 Genbank gene 4641726 4642052 . + . ID=gene-PUW34_22500;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=PUW34_22500 CP118122.1 Protein Homology CDS 4641726 4642052 . + 0 ID=cds-WJG97024.1;Parent=gene-PUW34_22500;Dbxref=NCBI_GP:WJG97024.1;Name=WJG97024.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=PUW34_22500;product=trp operon repressor;protein_id=WJG97024.1;transl_table=11 CP118122.1 Genbank gene 4642154 4642669 . - . ID=gene-PUW34_22505;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=PUW34_22505 CP118122.1 Protein Homology CDS 4642154 4642669 . - 0 ID=cds-WJG97025.1;Parent=gene-PUW34_22505;Dbxref=NCBI_GP:WJG97025.1;Name=WJG97025.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=PUW34_22505;product=inosine/xanthosine triphosphatase;protein_id=WJG97025.1;transl_table=11 CP118122.1 Genbank gene 4642718 4643365 . + . ID=gene-PUW34_22510;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=PUW34_22510 CP118122.1 Protein Homology CDS 4642718 4643365 . + 0 ID=cds-WJG97026.1;Parent=gene-PUW34_22510;Dbxref=NCBI_GP:WJG97026.1;Name=WJG97026.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=PUW34_22510;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WJG97026.1;transl_table=11 CP118122.1 Genbank gene 4643362 4644231 . - . ID=gene-PUW34_22515;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=PUW34_22515 CP118122.1 Protein Homology CDS 4643362 4644231 . - 0 ID=cds-WJG97027.1;Parent=gene-PUW34_22515;Dbxref=NCBI_GP:WJG97027.1;Name=WJG97027.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=PUW34_22515;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WJG97027.1;transl_table=11 CP118122.1 Genbank gene 4644443 4644916 . + . ID=gene-PUW34_22520;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=PUW34_22520 CP118122.1 Protein Homology CDS 4644443 4644916 . + 0 ID=cds-WJG97028.1;Parent=gene-PUW34_22520;Dbxref=NCBI_GP:WJG97028.1;Name=WJG97028.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=PUW34_22520;product=protein CreA;protein_id=WJG97028.1;transl_table=11 CP118122.1 Genbank gene 4644929 4645618 . + . ID=gene-PUW34_22525;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=PUW34_22525 CP118122.1 Protein Homology CDS 4644929 4645618 . + 0 ID=cds-WJG99076.1;Parent=gene-PUW34_22525;Dbxref=NCBI_GP:WJG99076.1;Name=WJG99076.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=PUW34_22525;product=two-component system response regulator CreB;protein_id=WJG99076.1;transl_table=11 CP118122.1 Genbank gene 4645618 4647042 . + . ID=gene-PUW34_22530;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=PUW34_22530 CP118122.1 Protein Homology CDS 4645618 4647042 . + 0 ID=cds-WJG97029.1;Parent=gene-PUW34_22530;Dbxref=NCBI_GP:WJG97029.1;Name=WJG97029.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=PUW34_22530;product=two-component system sensor histidine kinase CreC;protein_id=WJG97029.1;transl_table=11 CP118122.1 Genbank gene 4647100 4648449 . + . ID=gene-PUW34_22535;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=PUW34_22535 CP118122.1 Protein Homology CDS 4647100 4648449 . + 0 ID=cds-WJG97030.1;Parent=gene-PUW34_22535;Dbxref=NCBI_GP:WJG97030.1;Name=WJG97030.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=PUW34_22535;product=cell envelope integrity protein CreD;protein_id=WJG97030.1;transl_table=11 CP118122.1 Genbank pseudogene 4648507 4649554 . - . ID=gene-PUW34_22540;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=pseudogene;locus_tag=PUW34_22540;pseudo=true CP118122.1 Protein Homology CDS 4648507 4649554 . - 0 ID=cds-PUW34_22540;Parent=gene-PUW34_22540;Note=frameshifted;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=PUW34_22540;product=fimbrial major subunit SthE;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4649595 4650152 . - . ID=gene-PUW34_22545;Name=PUW34_22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22545 CP118122.1 Protein Homology CDS 4649595 4650152 . - 0 ID=cds-WJG97031.1;Parent=gene-PUW34_22545;Dbxref=NCBI_GP:WJG97031.1;Name=WJG97031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=PUW34_22545;product=fimbrial protein;protein_id=WJG97031.1;transl_table=11 CP118122.1 Genbank pseudogene 4650170 4652708 . - . ID=gene-PUW34_22550;Name=PUW34_22550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22550;pseudo=true CP118122.1 Protein Homology CDS 4650170 4652708 . - 0 ID=cds-PUW34_22550;Parent=gene-PUW34_22550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=PUW34_22550;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118122.1 Genbank pseudogene 4652754 4653437 . - . ID=gene-PUW34_22555;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=pseudogene;locus_tag=PUW34_22555;pseudo=true CP118122.1 Protein Homology CDS 4652754 4653437 . - 0 ID=cds-PUW34_22555;Parent=gene-PUW34_22555;Note=internal stop;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=PUW34_22555;product=fimbrial biogenesis chaperone SthA;pseudo=true;transl_table=11 CP118122.1 Genbank gene 4653508 4654053 . - . ID=gene-PUW34_22560;Name=PUW34_22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22560 CP118122.1 Protein Homology CDS 4653508 4654053 . - 0 ID=cds-WJG97032.1;Parent=gene-PUW34_22560;Dbxref=NCBI_GP:WJG97032.1;Name=WJG97032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=PUW34_22560;product=fimbrial protein;protein_id=WJG97032.1;transl_table=11 CP118122.1 Genbank gene 4654392 4655063 . - . ID=gene-PUW34_22565;Name=PUW34_22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22565 CP118122.1 Protein Homology CDS 4654392 4655063 . - 0 ID=cds-WJG97033.1;Parent=gene-PUW34_22565;Dbxref=NCBI_GP:WJG97033.1;Name=WJG97033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=PUW34_22565;product=helix-turn-helix domain-containing protein;protein_id=WJG97033.1;transl_table=11 CP118122.1 Genbank gene 4655448 4655762 . - . ID=gene-PUW34_22570;Name=PUW34_22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22570 CP118122.1 Protein Homology CDS 4655448 4655762 . - 0 ID=cds-WJG97034.1;Parent=gene-PUW34_22570;Dbxref=NCBI_GP:WJG97034.1;Name=WJG97034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=PUW34_22570;product=hypothetical protein;protein_id=WJG97034.1;transl_table=11 CP118122.1 Genbank gene 4656029 4656745 . - . ID=gene-PUW34_22575;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=PUW34_22575 CP118122.1 Protein Homology CDS 4656029 4656745 . - 0 ID=cds-WJG97035.1;Parent=gene-PUW34_22575;Dbxref=NCBI_GP:WJG97035.1;Name=WJG97035.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=PUW34_22575;product=two-component system response regulator ArcA;protein_id=WJG97035.1;transl_table=11 CP118122.1 Genbank gene 4656841 4656981 . + . ID=gene-PUW34_22580;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=PUW34_22580 CP118122.1 Protein Homology CDS 4656841 4656981 . + 0 ID=cds-WJG97036.1;Parent=gene-PUW34_22580;Dbxref=NCBI_GP:WJG97036.1;Name=WJG97036.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=PUW34_22580;product=protein YjjY;protein_id=WJG97036.1;transl_table=11 CP118122.1 Genbank gene 4657381 4658067 . + . ID=gene-PUW34_22585;Name=PUW34_22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22585 CP118122.1 Protein Homology CDS 4657381 4658067 . + 0 ID=cds-WJG97037.1;Parent=gene-PUW34_22585;Dbxref=NCBI_GP:WJG97037.1;Name=WJG97037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=PUW34_22585;product=tRNA/rRNA methyltransferase;protein_id=WJG97037.1;transl_table=11 ##sequence-region CP118123.1 1 88330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=594 CP118123.1 Genbank region 1 88330 . + . ID=CP118123.1:1..88330;Dbxref=taxon:594;Is_circular=true;Name=unnamed;collection-date=2017-08-11;country=South Africa: Gauteng;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Gallus gallus domesticus;plasmid-name=unnamed;serovar=Gallinarum;strain=ZA_442695;sub-species=enterica CP118123.1 Genbank gene 154 834 . - . ID=gene-PUW34_22595;Name=PUW34_22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22595 CP118123.1 Protein Homology CDS 154 834 . - 0 ID=cds-WJG99123.1;Parent=gene-PUW34_22595;Dbxref=NCBI_GP:WJG99123.1;Name=WJG99123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490548.1;locus_tag=PUW34_22595;product=DNA methylase;protein_id=WJG99123.1;transl_table=11 CP118123.1 Genbank gene 997 1278 . + . ID=gene-PUW34_22600;Name=PUW34_22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22600 CP118123.1 Protein Homology CDS 997 1278 . + 0 ID=cds-WJG99124.1;Parent=gene-PUW34_22600;Dbxref=NCBI_GP:WJG99124.1;Name=WJG99124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134757.1;locus_tag=PUW34_22600;product=hypothetical protein;protein_id=WJG99124.1;transl_table=11 CP118123.1 Genbank gene 1216 1572 . - . ID=gene-PUW34_22605;Name=PUW34_22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22605 CP118123.1 Protein Homology CDS 1216 1572 . - 0 ID=cds-WJG99125.1;Parent=gene-PUW34_22605;Dbxref=NCBI_GP:WJG99125.1;Name=WJG99125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490547.1;locus_tag=PUW34_22605;product=hypothetical protein;protein_id=WJG99125.1;transl_table=11 CP118123.1 Genbank gene 1565 2035 . - . ID=gene-PUW34_22610;Name=PUW34_22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22610 CP118123.1 Protein Homology CDS 1565 2035 . - 0 ID=cds-WJG99126.1;Parent=gene-PUW34_22610;Dbxref=NCBI_GP:WJG99126.1;Name=WJG99126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490546.1;locus_tag=PUW34_22610;product=hypothetical protein;protein_id=WJG99126.1;transl_table=11 CP118123.1 Genbank gene 2546 2968 . + . ID=gene-PUW34_22615;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PUW34_22615 CP118123.1 Protein Homology CDS 2546 2968 . + 0 ID=cds-WJG99127.1;Parent=gene-PUW34_22615;Dbxref=NCBI_GP:WJG99127.1;Name=WJG99127.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490545.1;locus_tag=PUW34_22615;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WJG99127.1;transl_table=11 CP118123.1 Genbank pseudogene 2968 4242 . + . ID=gene-PUW34_22620;Name=PUW34_22620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22620;pseudo=true CP118123.1 Protein Homology CDS 2968 4242 . + 0 ID=cds-PUW34_22620;Parent=gene-PUW34_22620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490544.1;locus_tag=PUW34_22620;product=Y-family DNA polymerase;pseudo=true;transl_table=11 CP118123.1 Genbank gene 4324 5298 . - . ID=gene-PUW34_22625;Name=PUW34_22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22625 CP118123.1 Protein Homology CDS 4324 5298 . - 0 ID=cds-WJG99128.1;Parent=gene-PUW34_22625;Dbxref=NCBI_GP:WJG99128.1;Name=WJG99128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229774.1;locus_tag=PUW34_22625;product=ParB family protein;protein_id=WJG99128.1;transl_table=11 CP118123.1 Genbank gene 5298 6503 . - . ID=gene-PUW34_22630;Name=PUW34_22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22630 CP118123.1 Protein Homology CDS 5298 6503 . - 0 ID=cds-WJG99129.1;Parent=gene-PUW34_22630;Dbxref=NCBI_GP:WJG99129.1;Name=WJG99129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490542.1;locus_tag=PUW34_22630;product=AAA family ATPase;protein_id=WJG99129.1;transl_table=11 CP118123.1 Genbank gene 6918 7859 . + . ID=gene-PUW34_22635;Name=PUW34_22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22635 CP118123.1 Protein Homology CDS 6918 7859 . + 0 ID=cds-WJG99130.1;Parent=gene-PUW34_22635;Dbxref=NCBI_GP:WJG99130.1;Name=WJG99130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=PUW34_22635;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG99130.1;transl_table=11 CP118123.1 Genbank pseudogene 7856 8457 . - . ID=gene-PUW34_22640;Name=PUW34_22640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22640;pseudo=true CP118123.1 Protein Homology CDS 7856 8457 . - 0 ID=cds-PUW34_22640;Parent=gene-PUW34_22640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1;locus_tag=PUW34_22640;product=DUF2913 family protein;pseudo=true;transl_table=11 CP118123.1 Genbank gene 8514 8930 . - . ID=gene-PUW34_22645;Name=PUW34_22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22645 CP118123.1 Protein Homology CDS 8514 8930 . - 0 ID=cds-WJG99131.1;Parent=gene-PUW34_22645;Dbxref=NCBI_GP:WJG99131.1;Name=WJG99131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988947.1;locus_tag=PUW34_22645;product=hypothetical protein;protein_id=WJG99131.1;transl_table=11 CP118123.1 Genbank gene 9033 9449 . - . ID=gene-PUW34_22650;Name=PUW34_22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22650 CP118123.1 Protein Homology CDS 9033 9449 . - 0 ID=cds-WJG99169.1;Parent=gene-PUW34_22650;Dbxref=NCBI_GP:WJG99169.1;Name=WJG99169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490539.1;locus_tag=PUW34_22650;product=hypothetical protein;protein_id=WJG99169.1;transl_table=11 CP118123.1 Genbank pseudogene 9535 10648 . - . ID=gene-PUW34_22655;Name=PUW34_22655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22655;pseudo=true CP118123.1 Protein Homology CDS 9535 10648 . - 0 ID=cds-PUW34_22655;Parent=gene-PUW34_22655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490538.1;locus_tag=PUW34_22655;product=DNA-binding protein;pseudo=true;transl_table=11 CP118123.1 Genbank gene 10907 11395 . + . ID=gene-PUW34_22660;Name=PUW34_22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22660 CP118123.1 Protein Homology CDS 10907 11395 . + 0 ID=cds-WJG99132.1;Parent=gene-PUW34_22660;Dbxref=NCBI_GP:WJG99132.1;Name=WJG99132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490537.1;locus_tag=PUW34_22660;product=cytoplasmic protein;protein_id=WJG99132.1;transl_table=11 CP118123.1 Genbank gene 12050 12790 . + . ID=gene-PUW34_22665;Name=PUW34_22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22665 CP118123.1 Protein Homology CDS 12050 12790 . + 0 ID=cds-WJG99133.1;Parent=gene-PUW34_22665;Dbxref=NCBI_GP:WJG99133.1;Name=WJG99133.1;Ontology_term=GO:0004089;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490536.1;locus_tag=PUW34_22665;product=carbonic anhydrase family protein;protein_id=WJG99133.1;transl_table=11 CP118123.1 Genbank gene 12997 13557 . + . ID=gene-PUW34_22670;Name=PUW34_22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22670 CP118123.1 Protein Homology CDS 12997 13557 . + 0 ID=cds-WJG99134.1;Parent=gene-PUW34_22670;Dbxref=NCBI_GP:WJG99134.1;Name=WJG99134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490535.1;locus_tag=PUW34_22670;product=recombinase family protein;protein_id=WJG99134.1;transl_table=11 CP118123.1 Genbank gene 13541 15205 . + . ID=gene-PUW34_22675;Name=PUW34_22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22675 CP118123.1 Protein Homology CDS 13541 15205 . + 0 ID=cds-WJG99135.1;Parent=gene-PUW34_22675;Dbxref=NCBI_GP:WJG99135.1;Name=WJG99135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490534.1;locus_tag=PUW34_22675;product=IS481 family transposase;protein_id=WJG99135.1;transl_table=11 CP118123.1 Genbank gene 15138 16163 . + . ID=gene-PUW34_22680;Name=PUW34_22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22680 CP118123.1 Protein Homology CDS 15138 16163 . + 0 ID=cds-WJG99136.1;Parent=gene-PUW34_22680;Dbxref=NCBI_GP:WJG99136.1;Name=WJG99136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490533.1;locus_tag=PUW34_22680;product=ExeA family protein;protein_id=WJG99136.1;transl_table=11 CP118123.1 Genbank gene 16352 17389 . - . ID=gene-PUW34_22685;Name=PUW34_22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22685 CP118123.1 Protein Homology CDS 16352 17389 . - 0 ID=cds-WJG99137.1;Parent=gene-PUW34_22685;Dbxref=NCBI_GP:WJG99137.1;Name=WJG99137.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490532.1;locus_tag=PUW34_22685;product=IS630 family transposase;protein_id=WJG99137.1;transl_table=11 CP118123.1 Genbank gene 17996 18889 . + . ID=gene-PUW34_22690;Name=spvR;gbkey=Gene;gene=spvR;gene_biotype=protein_coding;locus_tag=PUW34_22690 CP118123.1 Protein Homology CDS 17996 18889 . + 0 ID=cds-WJG99170.1;Parent=gene-PUW34_22690;Dbxref=NCBI_GP:WJG99170.1;Name=WJG99170.1;gbkey=CDS;gene=spvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490531.1;locus_tag=PUW34_22690;product=virulence genes transcriptional activator SpvR;protein_id=WJG99170.1;transl_table=11 CP118123.1 Genbank gene 19063 19227 . + . ID=gene-PUW34_22695;Name=PUW34_22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22695 CP118123.1 Protein Homology CDS 19063 19227 . + 0 ID=cds-WJG99138.1;Parent=gene-PUW34_22695;Dbxref=NCBI_GP:WJG99138.1;Name=WJG99138.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576629.1;locus_tag=PUW34_22695;product=glycoside hydrolase family protein;protein_id=WJG99138.1;transl_table=11 CP118123.1 Genbank gene 19401 20168 . + . ID=gene-PUW34_22700;Name=spvA;gbkey=Gene;gene=spvA;gene_biotype=protein_coding;locus_tag=PUW34_22700 CP118123.1 Protein Homology CDS 19401 20168 . + 0 ID=cds-WJG99139.1;Parent=gene-PUW34_22700;Dbxref=NCBI_GP:WJG99139.1;Name=WJG99139.1;gbkey=CDS;gene=spvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490530.1;locus_tag=PUW34_22700;product=virulence protein SpvA;protein_id=WJG99139.1;transl_table=11 CP118123.1 Genbank gene 20131 20298 . + . ID=gene-PUW34_22705;Name=PUW34_22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22705 CP118123.1 GeneMarkS-2+ CDS 20131 20298 . + 0 ID=cds-WJG99171.1;Parent=gene-PUW34_22705;Dbxref=NCBI_GP:WJG99171.1;Name=WJG99171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_22705;product=hypothetical protein;protein_id=WJG99171.1;transl_table=11 CP118123.1 Genbank gene 20350 22131 . + . ID=gene-PUW34_22710;Name=spvB;gbkey=Gene;gene=spvB;gene_biotype=protein_coding;locus_tag=PUW34_22710 CP118123.1 Protein Homology CDS 20350 22131 . + 0 ID=cds-WJG99140.1;Parent=gene-PUW34_22710;Dbxref=NCBI_GP:WJG99140.1;Name=WJG99140.1;gbkey=CDS;gene=spvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490529.1;locus_tag=PUW34_22710;product=SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB;protein_id=WJG99140.1;transl_table=11 CP118123.1 Genbank gene 22412 23137 . + . ID=gene-PUW34_22715;Name=spvC;gbkey=Gene;gene=spvC;gene_biotype=protein_coding;locus_tag=PUW34_22715 CP118123.1 Protein Homology CDS 22412 23137 . + 0 ID=cds-WJG99141.1;Parent=gene-PUW34_22715;Dbxref=NCBI_GP:WJG99141.1;Name=WJG99141.1;gbkey=CDS;gene=spvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490528.1;locus_tag=PUW34_22715;product=type III secretion system effector phosphothreonine lyase SpvC;protein_id=WJG99141.1;transl_table=11 CP118123.1 Genbank gene 24190 24603 . - . ID=gene-PUW34_22720;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PUW34_22720 CP118123.1 Protein Homology CDS 24190 24603 . - 0 ID=cds-WJG99142.1;Parent=gene-PUW34_22720;Dbxref=NCBI_GP:WJG99142.1;Name=WJG99142.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064919.1;locus_tag=PUW34_22720;product=IS200/IS605 family transposase;protein_id=WJG99142.1;transl_table=11 CP118123.1 Genbank gene 24660 25010 . + . ID=gene-PUW34_22725;Name=PUW34_22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22725 CP118123.1 Protein Homology CDS 24660 25010 . + 0 ID=cds-WJG99143.1;Parent=gene-PUW34_22725;Dbxref=NCBI_GP:WJG99143.1;Name=WJG99143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490525.1;locus_tag=PUW34_22725;product=transposase;protein_id=WJG99143.1;transl_table=11 CP118123.1 Genbank pseudogene 25077 25627 . - . ID=gene-PUW34_22730;Name=PUW34_22730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22730;pseudo=true CP118123.1 Protein Homology CDS 25077 25627 . - 0 ID=cds-PUW34_22730;Parent=gene-PUW34_22730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490524.1;locus_tag=PUW34_22730;product=inverse autotransporter beta domain-containing protein;pseudo=true;transl_table=11 CP118123.1 Genbank gene 25516 25845 . - . ID=gene-PUW34_22735;Name=PUW34_22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22735 CP118123.1 GeneMarkS-2+ CDS 25516 25845 . - 0 ID=cds-WJG99144.1;Parent=gene-PUW34_22735;Dbxref=NCBI_GP:WJG99144.1;Name=WJG99144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_22735;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WJG99144.1;transl_table=11 CP118123.1 Genbank pseudogene 26362 26824 . - . ID=gene-PUW34_22740;Name=PUW34_22740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22740;pseudo=true CP118123.1 Protein Homology CDS 26362 26824 . - 0 ID=cds-PUW34_22740;Parent=gene-PUW34_22740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490523.1;locus_tag=PUW34_22740;product=hypothetical protein;pseudo=true;transl_table=11 CP118123.1 Genbank gene 26818 27306 . - . ID=gene-PUW34_22745;Name=PUW34_22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22745 CP118123.1 Protein Homology CDS 26818 27306 . - 0 ID=cds-WJG99145.1;Parent=gene-PUW34_22745;Dbxref=NCBI_GP:WJG99145.1;Name=WJG99145.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075507.1;locus_tag=PUW34_22745;product=CaiF/GrlA family transcriptional regulator;protein_id=WJG99145.1;transl_table=11 CP118123.1 Genbank gene 27493 28044 . - . ID=gene-PUW34_22750;Name=PUW34_22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22750 CP118123.1 Protein Homology CDS 27493 28044 . - 0 ID=cds-WJG99146.1;Parent=gene-PUW34_22750;Dbxref=NCBI_GP:WJG99146.1;Name=WJG99146.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=PUW34_22750;product=EAL domain-containing protein;protein_id=WJG99146.1;transl_table=11 CP118123.1 Genbank gene 28053 28835 . - . ID=gene-PUW34_22755;Name=PUW34_22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22755 CP118123.1 Protein Homology CDS 28053 28835 . - 0 ID=cds-WJG99147.1;Parent=gene-PUW34_22755;Dbxref=NCBI_GP:WJG99147.1;Name=WJG99147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490521.1;locus_tag=PUW34_22755;product=site-specific integrase;protein_id=WJG99147.1;transl_table=11 CP118123.1 Genbank gene 28870 29391 . - . ID=gene-PUW34_22760;Name=PUW34_22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22760 CP118123.1 Protein Homology CDS 28870 29391 . - 0 ID=cds-WJG99148.1;Parent=gene-PUW34_22760;Dbxref=NCBI_GP:WJG99148.1;Name=WJG99148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490520.1;locus_tag=PUW34_22760;product=cytoplasmic protein;protein_id=WJG99148.1;transl_table=11 CP118123.1 Genbank gene 29388 29678 . - . ID=gene-PUW34_22765;Name=PUW34_22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22765 CP118123.1 Protein Homology CDS 29388 29678 . - 0 ID=cds-WJG99149.1;Parent=gene-PUW34_22765;Dbxref=NCBI_GP:WJG99149.1;Name=WJG99149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490519.1;locus_tag=PUW34_22765;product=cytoplasmic protein;protein_id=WJG99149.1;transl_table=11 CP118123.1 Genbank gene 29680 29985 . - . ID=gene-PUW34_22770;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=PUW34_22770 CP118123.1 Protein Homology CDS 29680 29985 . - 0 ID=cds-WJG99150.1;Parent=gene-PUW34_22770;Dbxref=NCBI_GP:WJG99150.1;Name=WJG99150.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490518.1;locus_tag=PUW34_22770;product=type II toxin-antitoxin system toxin CcdB;protein_id=WJG99150.1;transl_table=11 CP118123.1 Genbank gene 29987 30205 . - . ID=gene-PUW34_22775;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=PUW34_22775 CP118123.1 Protein Homology CDS 29987 30205 . - 0 ID=cds-WJG99151.1;Parent=gene-PUW34_22775;Dbxref=NCBI_GP:WJG99151.1;Name=WJG99151.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490517.1;locus_tag=PUW34_22775;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WJG99151.1;transl_table=11 CP118123.1 Genbank gene 30949 31179 . + . ID=gene-PUW34_22780;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=PUW34_22780 CP118123.1 Protein Homology CDS 30949 31179 . + 0 ID=cds-WJG99152.1;Parent=gene-PUW34_22780;Dbxref=NCBI_GP:WJG99152.1;Name=WJG99152.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=PUW34_22780;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WJG99152.1;transl_table=11 CP118123.1 Genbank gene 31176 31604 . + . ID=gene-PUW34_22785;Name=PUW34_22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22785 CP118123.1 Protein Homology CDS 31176 31604 . + 0 ID=cds-WJG99153.1;Parent=gene-PUW34_22785;Dbxref=NCBI_GP:WJG99153.1;Name=WJG99153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000812999.1;locus_tag=PUW34_22785;product=type II toxin-antitoxin system VapC family toxin;protein_id=WJG99153.1;transl_table=11 CP118123.1 Genbank gene 32174 33022 . - . ID=gene-PUW34_22790;Name=PUW34_22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22790 CP118123.1 Protein Homology CDS 32174 33022 . - 0 ID=cds-WJG99154.1;Parent=gene-PUW34_22790;Dbxref=NCBI_GP:WJG99154.1;Name=WJG99154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=PUW34_22790;product=SdiA-regulated domain-containing protein;protein_id=WJG99154.1;transl_table=11 CP118123.1 Genbank gene 33048 33209 . - . ID=gene-PUW34_22795;Name=PUW34_22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22795 CP118123.1 GeneMarkS-2+ CDS 33048 33209 . - 0 ID=cds-WJG99172.1;Parent=gene-PUW34_22795;Dbxref=NCBI_GP:WJG99172.1;Name=WJG99172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_22795;product=hypothetical protein;protein_id=WJG99172.1;transl_table=11 CP118123.1 Genbank gene 33470 33682 . - . ID=gene-PUW34_22800;Name=PUW34_22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22800 CP118123.1 Protein Homology CDS 33470 33682 . - 0 ID=cds-WJG99155.1;Parent=gene-PUW34_22800;Dbxref=NCBI_GP:WJG99155.1;Name=WJG99155.1;Ontology_term=GO:0006355,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063796.1;locus_tag=PUW34_22800;product=FaeA/PapI family transcriptional regulator;protein_id=WJG99155.1;transl_table=11 CP118123.1 Genbank gene 33755 34339 . - . ID=gene-PUW34_22805;Name=PUW34_22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22805 CP118123.1 Protein Homology CDS 33755 34339 . - 0 ID=cds-WJG99156.1;Parent=gene-PUW34_22805;Dbxref=NCBI_GP:WJG99156.1;Name=WJG99156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=PUW34_22805;product=hypothetical protein;protein_id=WJG99156.1;transl_table=11 CP118123.1 Genbank gene 34619 35176 . - . ID=gene-PUW34_22810;Name=PUW34_22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22810 CP118123.1 GeneMarkS-2+ CDS 34619 35176 . - 0 ID=cds-WJG99157.1;Parent=gene-PUW34_22810;Dbxref=NCBI_GP:WJG99157.1;Name=WJG99157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_22810;product=fimbrial protein;protein_id=WJG99157.1;transl_table=11 CP118123.1 Genbank gene 35176 35451 . - . ID=gene-PUW34_22815;Name=PUW34_22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22815 CP118123.1 Protein Homology CDS 35176 35451 . - 0 ID=cds-WJG99158.1;Parent=gene-PUW34_22815;Dbxref=NCBI_GP:WJG99158.1;Name=WJG99158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020576.1;locus_tag=PUW34_22815;product=hypothetical protein;protein_id=WJG99158.1;transl_table=11 CP118123.1 Genbank gene 35438 36202 . - . ID=gene-PUW34_22820;Name=PUW34_22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22820 CP118123.1 Protein Homology CDS 35438 36202 . - 0 ID=cds-WJG99159.1;Parent=gene-PUW34_22820;Dbxref=NCBI_GP:WJG99159.1;Name=WJG99159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000827659.1;locus_tag=PUW34_22820;product=fimbrial protein;protein_id=WJG99159.1;transl_table=11 CP118123.1 Genbank gene 36230 37027 . - . ID=gene-PUW34_22825;Name=faeH;gbkey=Gene;gene=faeH;gene_biotype=protein_coding;locus_tag=PUW34_22825 CP118123.1 Protein Homology CDS 36230 37027 . - 0 ID=cds-WJG99160.1;Parent=gene-PUW34_22825;Dbxref=NCBI_GP:WJG99160.1;Name=WJG99160.1;gbkey=CDS;gene=faeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704720.1;locus_tag=PUW34_22825;product=F4 (K88) fimbria minor subunit FaeH;protein_id=WJG99160.1;transl_table=11 CP118123.1 Genbank gene 37263 37535 . - . ID=gene-PUW34_22830;Name=PUW34_22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22830 CP118123.1 GeneMarkS-2+ CDS 37263 37535 . - 0 ID=cds-WJG99161.1;Parent=gene-PUW34_22830;Dbxref=NCBI_GP:WJG99161.1;Name=WJG99161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_22830;product=hypothetical protein;protein_id=WJG99161.1;transl_table=11 CP118123.1 Genbank gene 38994 39653 . + . ID=gene-PUW34_22835;Name=PUW34_22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22835 CP118123.1 Protein Homology CDS 38994 39653 . + 0 ID=cds-WJG99162.1;Parent=gene-PUW34_22835;Dbxref=NCBI_GP:WJG99162.1;Name=WJG99162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575507.1;locus_tag=PUW34_22835;product=fimbrial protein;protein_id=WJG99162.1;transl_table=11 CP118123.1 Genbank gene 39805 40536 . + . ID=gene-PUW34_22840;Name=PUW34_22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22840 CP118123.1 GeneMarkS-2+ CDS 39805 40536 . + 0 ID=cds-WJG99163.1;Parent=gene-PUW34_22840;Dbxref=NCBI_GP:WJG99163.1;Name=WJG99163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_22840;product=hypothetical protein;protein_id=WJG99163.1;transl_table=11 CP118123.1 Genbank gene 40703 40900 . + . ID=gene-PUW34_22845;Name=PUW34_22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22845 CP118123.1 Protein Homology CDS 40703 40900 . + 0 ID=cds-WJG99164.1;Parent=gene-PUW34_22845;Dbxref=NCBI_GP:WJG99164.1;Name=WJG99164.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=PUW34_22845;product=transposase;protein_id=WJG99164.1;transl_table=11 CP118123.1 Genbank pseudogene 41055 41269 . + . ID=gene-PUW34_22850;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=PUW34_22850;pseudo=true CP118123.1 Protein Homology CDS 41055 41269 . + 0 ID=cds-PUW34_22850;Parent=gene-PUW34_22850;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=PUW34_22850;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 CP118123.1 Genbank pseudogene 41261 41665 . + . ID=gene-PUW34_22855;Name=PUW34_22855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22855;pseudo=true CP118123.1 Protein Homology CDS 41261 41665 . + 0 ID=cds-PUW34_22855;Parent=gene-PUW34_22855;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=PUW34_22855;product=IS66 family transposase zinc-finger binding domain-containing protein;pseudo=true;transl_table=11 CP118123.1 Genbank gene 42459 43340 . - . ID=gene-PUW34_22860;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PUW34_22860 CP118123.1 Protein Homology CDS 42459 43340 . - 0 ID=cds-WJG99165.1;Parent=gene-PUW34_22860;Dbxref=NCBI_GP:WJG99165.1;Name=WJG99165.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=PUW34_22860;product=incFII family plasmid replication initiator RepA;protein_id=WJG99165.1;transl_table=11 CP118123.1 Genbank gene 43321 43398 . - . ID=gene-PUW34_22865;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=PUW34_22865 CP118123.1 Protein Homology CDS 43321 43398 . - 0 ID=cds-WJG99167.1;Parent=gene-PUW34_22865;Dbxref=NCBI_GP:WJG99167.1;Name=WJG99167.1;Ontology_term=GO:0006276,GO:0003674;gbkey=CDS;gene=tap;go_function=molecular_function|0003674||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490497.1;locus_tag=PUW34_22865;product=RepA leader peptide Tap;protein_id=WJG99167.1;transl_table=11 CP118123.1 Genbank gene 43646 43912 . - . ID=gene-PUW34_22870;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PUW34_22870 CP118123.1 Protein Homology CDS 43646 43912 . - 0 ID=cds-WJG99166.1;Parent=gene-PUW34_22870;Dbxref=NCBI_GP:WJG99166.1;Name=WJG99166.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490495.1;locus_tag=PUW34_22870;product=replication regulatory protein RepA;protein_id=WJG99166.1;transl_table=11 CP118123.1 Genbank pseudogene 44023 44590 . - . ID=gene-PUW34_22875;Name=PUW34_22875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22875;pseudo=true CP118123.1 Protein Homology CDS 44023 44590 . - 0 ID=cds-PUW34_22875;Parent=gene-PUW34_22875;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242133.1;locus_tag=PUW34_22875;product=phospholipase D family protein;pseudo=true;transl_table=11 CP118123.1 Genbank pseudogene 44777 44860 . - . ID=gene-PUW34_22880;Name=PUW34_22880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22880;pseudo=true CP118123.1 Protein Homology CDS 44777 44860 . - 0 ID=cds-PUW34_22880;Parent=gene-PUW34_22880;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490493.1;locus_tag=PUW34_22880;product=hypothetical protein;pseudo=true;transl_table=11 CP118123.1 Genbank gene 44977 45540 . - . ID=gene-PUW34_22885;Name=PUW34_22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22885 CP118123.1 Protein Homology CDS 44977 45540 . - 0 ID=cds-WJG99082.1;Parent=gene-PUW34_22885;Dbxref=NCBI_GP:WJG99082.1;Name=WJG99082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490594.1;locus_tag=PUW34_22885;product=fertility inhibition protein FinO;protein_id=WJG99082.1;transl_table=11 CP118123.1 Genbank gene 45595 46335 . - . ID=gene-PUW34_22890;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=PUW34_22890 CP118123.1 Protein Homology CDS 45595 46335 . - 0 ID=cds-WJG99083.1;Parent=gene-PUW34_22890;Dbxref=NCBI_GP:WJG99083.1;Name=WJG99083.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490593.1;locus_tag=PUW34_22890;product=conjugal transfer pilus acetylase TraX;protein_id=WJG99083.1;transl_table=11 CP118123.1 Genbank pseudogene 46355 51612 . - . ID=gene-PUW34_22895;Name=traI;gbkey=Gene;gene=traI;gene_biotype=pseudogene;locus_tag=PUW34_22895;pseudo=true CP118123.1 Protein Homology CDS 46355 51612 . - 0 ID=cds-PUW34_22895;Parent=gene-PUW34_22895;Note=frameshifted;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=PUW34_22895;product=conjugative transfer relaxase/helicase TraI;pseudo=true;transl_table=11 CP118123.1 Genbank gene 51612 53864 . - . ID=gene-PUW34_22900;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=PUW34_22900 CP118123.1 Protein Homology CDS 51612 53864 . - 0 ID=cds-WJG99084.1;Parent=gene-PUW34_22900;Dbxref=NCBI_GP:WJG99084.1;Name=WJG99084.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490588.1;locus_tag=PUW34_22900;product=type IV conjugative transfer system coupling protein TraD;protein_id=WJG99084.1;transl_table=11 CP118123.1 Genbank gene 54241 54972 . - . ID=gene-PUW34_22905;Name=PUW34_22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22905 CP118123.1 Protein Homology CDS 54241 54972 . - 0 ID=cds-WJG99085.1;Parent=gene-PUW34_22905;Dbxref=NCBI_GP:WJG99085.1;Name=WJG99085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=PUW34_22905;product=complement resistance protein TraT;protein_id=WJG99085.1;transl_table=11 CP118123.1 Genbank gene 55218 55700 . - . ID=gene-PUW34_22910;Name=PUW34_22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22910 CP118123.1 Protein Homology CDS 55218 55700 . - 0 ID=cds-WJG99086.1;Parent=gene-PUW34_22910;Dbxref=NCBI_GP:WJG99086.1;Name=WJG99086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787664.1;locus_tag=PUW34_22910;product=surface exclusion protein;protein_id=WJG99086.1;transl_table=11 CP118123.1 Genbank gene 55722 58544 . - . ID=gene-PUW34_22915;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=PUW34_22915 CP118123.1 Protein Homology CDS 55722 58544 . - 0 ID=cds-WJG99087.1;Parent=gene-PUW34_22915;Dbxref=NCBI_GP:WJG99087.1;Name=WJG99087.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007083.1;locus_tag=PUW34_22915;product=conjugal transfer mating pair stabilization protein TraG;protein_id=WJG99087.1;transl_table=11 CP118123.1 Genbank pseudogene 58541 59924 . - . ID=gene-PUW34_22920;Name=PUW34_22920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22920;pseudo=true CP118123.1 Protein Homology CDS 58541 59924 . - 0 ID=cds-PUW34_22920;Parent=gene-PUW34_22920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490584.1;locus_tag=PUW34_22920;product=conjugal transfer protein TraH;pseudo=true;transl_table=11 CP118123.1 Genbank gene 59914 60462 . - . ID=gene-PUW34_22925;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=PUW34_22925 CP118123.1 Protein Homology CDS 59914 60462 . - 0 ID=cds-WJG99088.1;Parent=gene-PUW34_22925;Dbxref=NCBI_GP:WJG99088.1;Name=WJG99088.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490583.1;locus_tag=PUW34_22925;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WJG99088.1;transl_table=11 CP118123.1 Genbank gene 60449 60742 . - . ID=gene-PUW34_22930;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=PUW34_22930 CP118123.1 Protein Homology CDS 60449 60742 . - 0 ID=cds-WJG99089.1;Parent=gene-PUW34_22930;Dbxref=NCBI_GP:WJG99089.1;Name=WJG99089.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490582.1;locus_tag=PUW34_22930;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WJG99089.1;transl_table=11 CP118123.1 Genbank gene 60956 61699 . - . ID=gene-PUW34_22935;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=PUW34_22935 CP118123.1 Protein Homology CDS 60956 61699 . - 0 ID=cds-WJG99090.1;Parent=gene-PUW34_22935;Dbxref=NCBI_GP:WJG99090.1;Name=WJG99090.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490581.1;locus_tag=PUW34_22935;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WJG99090.1;transl_table=11 CP118123.1 Genbank gene 61712 61927 . - . ID=gene-PUW34_22940;Name=PUW34_22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22940 CP118123.1 Protein Homology CDS 61712 61927 . - 0 ID=cds-WJG99091.1;Parent=gene-PUW34_22940;Dbxref=NCBI_GP:WJG99091.1;Name=WJG99091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746544.1;locus_tag=PUW34_22940;product=conjugal transfer protein TrbE;protein_id=WJG99091.1;transl_table=11 CP118123.1 Genbank gene 61938 62414 . - . ID=gene-PUW34_22945;Name=PUW34_22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22945 CP118123.1 Protein Homology CDS 61938 62414 . - 0 ID=cds-WJG99092.1;Parent=gene-PUW34_22945;Dbxref=NCBI_GP:WJG99092.1;Name=WJG99092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746543.1;locus_tag=PUW34_22945;product=hypothetical protein;protein_id=WJG99092.1;transl_table=11 CP118123.1 Genbank gene 62425 64242 . - . ID=gene-PUW34_22950;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=PUW34_22950 CP118123.1 Protein Homology CDS 62425 64242 . - 0 ID=cds-WJG99093.1;Parent=gene-PUW34_22950;Dbxref=NCBI_GP:WJG99093.1;Name=WJG99093.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490579.1;locus_tag=PUW34_22950;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WJG99093.1;transl_table=11 CP118123.1 Genbank pseudogene 64239 64657 . - . ID=gene-PUW34_22955;Name=PUW34_22955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_22955;pseudo=true CP118123.1 Protein Homology CDS 64239 64657 . - 0 ID=cds-PUW34_22955;Parent=gene-PUW34_22955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229397.1;locus_tag=PUW34_22955;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 CP118123.1 Genbank gene 64688 65326 . - . ID=gene-PUW34_22960;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=PUW34_22960 CP118123.1 Protein Homology CDS 64688 65326 . - 0 ID=cds-WJG99094.1;Parent=gene-PUW34_22960;Dbxref=NCBI_GP:WJG99094.1;Name=WJG99094.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490578.1;locus_tag=PUW34_22960;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WJG99094.1;transl_table=11 CP118123.1 Genbank gene 65311 65619 . - . ID=gene-PUW34_22965;Name=PUW34_22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22965 CP118123.1 Protein Homology CDS 65311 65619 . - 0 ID=cds-WJG99095.1;Parent=gene-PUW34_22965;Dbxref=NCBI_GP:WJG99095.1;Name=WJG99095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490577.1;locus_tag=PUW34_22965;product=hypothetical protein;protein_id=WJG99095.1;transl_table=11 CP118123.1 Genbank gene 65638 66630 . - . ID=gene-PUW34_22970;Name=PUW34_22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22970 CP118123.1 Protein Homology CDS 65638 66630 . - 0 ID=cds-WJG99096.1;Parent=gene-PUW34_22970;Dbxref=NCBI_GP:WJG99096.1;Name=WJG99096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=PUW34_22970;product=conjugal transfer pilus assembly protein TraU;protein_id=WJG99096.1;transl_table=11 CP118123.1 Genbank gene 66627 67259 . - . ID=gene-PUW34_22975;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=PUW34_22975 CP118123.1 Protein Homology CDS 66627 67259 . - 0 ID=cds-WJG99097.1;Parent=gene-PUW34_22975;Dbxref=NCBI_GP:WJG99097.1;Name=WJG99097.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=PUW34_22975;product=type-F conjugative transfer system protein TraW;protein_id=WJG99097.1;transl_table=11 CP118123.1 Genbank gene 67256 67642 . - . ID=gene-PUW34_22980;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=PUW34_22980 CP118123.1 Protein Homology CDS 67256 67642 . - 0 ID=cds-WJG99098.1;Parent=gene-PUW34_22980;Dbxref=NCBI_GP:WJG99098.1;Name=WJG99098.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=PUW34_22980;product=type-F conjugative transfer system protein TrbI;protein_id=WJG99098.1;transl_table=11 CP118123.1 Genbank pseudogene 67617 70264 . - . ID=gene-PUW34_22985;Name=traC;gbkey=Gene;gene=traC;gene_biotype=pseudogene;locus_tag=PUW34_22985;pseudo=true CP118123.1 Protein Homology CDS 67617 70264 . - 0 ID=cds-PUW34_22985;Parent=gene-PUW34_22985;Note=frameshifted;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490573.1;locus_tag=PUW34_22985;product=type IV secretion system protein TraC;pseudo=true;transl_table=11 CP118123.1 Genbank gene 70280 70663 . - . ID=gene-PUW34_22990;Name=PUW34_22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22990 CP118123.1 Protein Homology CDS 70280 70663 . - 0 ID=cds-WJG99099.1;Parent=gene-PUW34_22990;Dbxref=NCBI_GP:WJG99099.1;Name=WJG99099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870327.1;locus_tag=PUW34_22990;product=hypothetical protein;protein_id=WJG99099.1;transl_table=11 CP118123.1 Genbank gene 70660 71127 . - . ID=gene-PUW34_22995;Name=PUW34_22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22995 CP118123.1 Protein Homology CDS 70660 71127 . - 0 ID=cds-WJG99100.1;Parent=gene-PUW34_22995;Dbxref=NCBI_GP:WJG99100.1;Name=WJG99100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490572.1;locus_tag=PUW34_22995;product=hypothetical protein;protein_id=WJG99100.1;transl_table=11 CP118123.1 Genbank gene 71120 71341 . - . ID=gene-PUW34_23000;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=PUW34_23000 CP118123.1 Protein Homology CDS 71120 71341 . - 0 ID=cds-WJG99101.1;Parent=gene-PUW34_23000;Dbxref=NCBI_GP:WJG99101.1;Name=WJG99101.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=PUW34_23000;product=conjugal transfer protein TraR;protein_id=WJG99101.1;transl_table=11 CP118123.1 Genbank gene 71476 71991 . - . ID=gene-PUW34_23005;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=PUW34_23005 CP118123.1 Protein Homology CDS 71476 71991 . - 0 ID=cds-WJG99102.1;Parent=gene-PUW34_23005;Dbxref=NCBI_GP:WJG99102.1;Name=WJG99102.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490570.1;locus_tag=PUW34_23005;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WJG99102.1;transl_table=11 CP118123.1 Genbank gene 71988 72212 . - . ID=gene-PUW34_23010;Name=PUW34_23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23010 CP118123.1 Protein Homology CDS 71988 72212 . - 0 ID=cds-WJG99103.1;Parent=gene-PUW34_23010;Dbxref=NCBI_GP:WJG99103.1;Name=WJG99103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490569.1;locus_tag=PUW34_23010;product=DUF2689 domain-containing protein;protein_id=WJG99103.1;transl_table=11 CP118123.1 Genbank gene 72190 72786 . - . ID=gene-PUW34_23015;Name=PUW34_23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23015 CP118123.1 Protein Homology CDS 72190 72786 . - 0 ID=cds-WJG99104.1;Parent=gene-PUW34_23015;Dbxref=NCBI_GP:WJG99104.1;Name=WJG99104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490568.1;locus_tag=PUW34_23015;product=conjugal transfer protein TraP;protein_id=WJG99104.1;transl_table=11 CP118123.1 Genbank pseudogene 72776 74194 . - . ID=gene-PUW34_23020;Name=PUW34_23020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_23020;pseudo=true CP118123.1 Protein Homology CDS 72776 74194 . - 0 ID=cds-PUW34_23020;Parent=gene-PUW34_23020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490567.1;locus_tag=PUW34_23020;product=conjugal transfer protein TraB;pseudo=true;transl_table=11 CP118123.1 Genbank gene 74194 74934 . - . ID=gene-PUW34_23025;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=PUW34_23025 CP118123.1 Protein Homology CDS 74194 74934 . - 0 ID=cds-WJG99105.1;Parent=gene-PUW34_23025;Dbxref=NCBI_GP:WJG99105.1;Name=WJG99105.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=PUW34_23025;product=type-F conjugative transfer system secretin TraK;protein_id=WJG99105.1;transl_table=11 CP118123.1 Genbank gene 74921 75487 . - . ID=gene-PUW34_23030;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=PUW34_23030 CP118123.1 Protein Homology CDS 74921 75487 . - 0 ID=cds-WJG99106.1;Parent=gene-PUW34_23030;Dbxref=NCBI_GP:WJG99106.1;Name=WJG99106.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=PUW34_23030;product=type IV conjugative transfer system protein TraE;protein_id=WJG99106.1;transl_table=11 CP118123.1 Genbank gene 75509 75820 . - . ID=gene-PUW34_23035;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=PUW34_23035 CP118123.1 Protein Homology CDS 75509 75820 . - 0 ID=cds-WJG99107.1;Parent=gene-PUW34_23035;Dbxref=NCBI_GP:WJG99107.1;Name=WJG99107.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=PUW34_23035;product=type IV conjugative transfer system protein TraL;protein_id=WJG99107.1;transl_table=11 CP118123.1 Genbank gene 75835 76197 . - . ID=gene-PUW34_23040;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=PUW34_23040 CP118123.1 Protein Homology CDS 75835 76197 . - 0 ID=cds-WJG99108.1;Parent=gene-PUW34_23040;Dbxref=NCBI_GP:WJG99108.1;Name=WJG99108.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490563.1;locus_tag=PUW34_23040;product=type IV conjugative transfer system pilin TraA;protein_id=WJG99108.1;transl_table=11 CP118123.1 Genbank gene 76239 76640 . - . ID=gene-PUW34_23045;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=PUW34_23045 CP118123.1 Protein Homology CDS 76239 76640 . - 0 ID=cds-WJG99109.1;Parent=gene-PUW34_23045;Dbxref=NCBI_GP:WJG99109.1;Name=WJG99109.1;gbkey=CDS;gene=traY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672631.1;locus_tag=PUW34_23045;product=conjugal transfer relaxosome protein TraY;protein_id=WJG99109.1;transl_table=11 CP118123.1 Genbank gene 76733 77422 . - . ID=gene-PUW34_23050;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=PUW34_23050 CP118123.1 Protein Homology CDS 76733 77422 . - 0 ID=cds-WJG99110.1;Parent=gene-PUW34_23050;Dbxref=NCBI_GP:WJG99110.1;Name=WJG99110.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746563.1;locus_tag=PUW34_23050;product=conjugal transfer transcriptional regulator TraJ;protein_id=WJG99110.1;transl_table=11 CP118123.1 Genbank gene 77624 77995 . - . ID=gene-PUW34_23055;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=PUW34_23055 CP118123.1 Protein Homology CDS 77624 77995 . - 0 ID=cds-WJG99111.1;Parent=gene-PUW34_23055;Dbxref=NCBI_GP:WJG99111.1;Name=WJG99111.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151569.1;locus_tag=PUW34_23055;product=relaxosome protein TraM;protein_id=WJG99111.1;transl_table=11 CP118123.1 Genbank gene 78418 78888 . + . ID=gene-PUW34_23060;Name=PUW34_23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23060 CP118123.1 Protein Homology CDS 78418 78888 . + 0 ID=cds-WJG99168.1;Parent=gene-PUW34_23060;Dbxref=NCBI_GP:WJG99168.1;Name=WJG99168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490559.1;locus_tag=PUW34_23060;product=transglycosylase SLT domain-containing protein;protein_id=WJG99168.1;transl_table=11 CP118123.1 Genbank pseudogene 79198 80016 . - . ID=gene-PUW34_23065;Name=PUW34_23065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_23065;pseudo=true CP118123.1 Protein Homology CDS 79198 80016 . - 0 ID=cds-PUW34_23065;Parent=gene-PUW34_23065;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=PUW34_23065;product=DUF932 domain-containing protein;pseudo=true;transl_table=11 CP118123.1 Genbank gene 80119 80277 . - . ID=gene-PUW34_23070;Name=PUW34_23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23070 CP118123.1 Protein Homology CDS 80119 80277 . - 0 ID=cds-WJG99112.1;Parent=gene-PUW34_23070;Dbxref=NCBI_GP:WJG99112.1;Name=WJG99112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001704449.1;locus_tag=PUW34_23070;product=hypothetical protein;protein_id=WJG99112.1;transl_table=11 CP118123.1 Genbank gene 80363 80491 . - . ID=gene-PUW34_23075;Name=PUW34_23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23075 CP118123.1 GeneMarkS-2+ CDS 80363 80491 . - 0 ID=cds-WJG99113.1;Parent=gene-PUW34_23075;Dbxref=NCBI_GP:WJG99113.1;Name=WJG99113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_23075;product=hypothetical protein;protein_id=WJG99113.1;transl_table=11 CP118123.1 Genbank pseudogene 80526 81182 . - . ID=gene-PUW34_23080;Name=PUW34_23080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_23080;pseudo=true CP118123.1 Protein Homology CDS 80526 81182 . - 0 ID=cds-PUW34_23080;Parent=gene-PUW34_23080;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490558.1;locus_tag=PUW34_23080;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 CP118123.1 Genbank pseudogene 81176 81310 . - . ID=gene-PUW34_23085;Name=PUW34_23085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_23085;pseudo=true CP118123.1 Protein Homology CDS 81176 81310 . - 0 ID=cds-PUW34_23085;Parent=gene-PUW34_23085;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490557.1;locus_tag=PUW34_23085;product=conjugation system SOS inhibitor PsiB family protein;pseudo=true;transl_table=11 CP118123.1 Genbank gene 81350 83347 . - . ID=gene-PUW34_23090;Name=PUW34_23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23090 CP118123.1 Protein Homology CDS 81350 83347 . - 0 ID=cds-WJG99114.1;Parent=gene-PUW34_23090;Dbxref=NCBI_GP:WJG99114.1;Name=WJG99114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490556.1;locus_tag=PUW34_23090;product=ParB/RepB/Spo0J family partition protein;protein_id=WJG99114.1;transl_table=11 CP118123.1 Genbank gene 83416 83658 . - . ID=gene-PUW34_23095;Name=PUW34_23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23095 CP118123.1 Protein Homology CDS 83416 83658 . - 0 ID=cds-WJG99115.1;Parent=gene-PUW34_23095;Dbxref=NCBI_GP:WJG99115.1;Name=WJG99115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490555.1;locus_tag=PUW34_23095;product=DUF905 domain-containing protein;protein_id=WJG99115.1;transl_table=11 CP118123.1 Genbank pseudogene 83713 84232 . - . ID=gene-PUW34_23100;Name=PUW34_23100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW34_23100;pseudo=true CP118123.1 Protein Homology CDS 83713 84232 . - 0 ID=cds-PUW34_23100;Parent=gene-PUW34_23100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490554.1;locus_tag=PUW34_23100;product=single-stranded DNA-binding protein SSB2;pseudo=true;transl_table=11 CP118123.1 Genbank gene 84825 85004 . - . ID=gene-PUW34_23105;Name=PUW34_23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23105 CP118123.1 GeneMarkS-2+ CDS 84825 85004 . - 0 ID=cds-WJG99116.1;Parent=gene-PUW34_23105;Dbxref=NCBI_GP:WJG99116.1;Name=WJG99116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW34_23105;product=hypothetical protein;protein_id=WJG99116.1;transl_table=11 CP118123.1 Genbank gene 84968 85291 . - . ID=gene-PUW34_23110;Name=PUW34_23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23110 CP118123.1 Protein Homology CDS 84968 85291 . - 0 ID=cds-WJG99117.1;Parent=gene-PUW34_23110;Dbxref=NCBI_GP:WJG99117.1;Name=WJG99117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490553.1;locus_tag=PUW34_23110;product=DNA polymerase III subunit theta;protein_id=WJG99117.1;transl_table=11 CP118123.1 Genbank gene 85527 85961 . - . ID=gene-PUW34_23115;Name=PUW34_23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23115 CP118123.1 Protein Homology CDS 85527 85961 . - 0 ID=cds-WJG99118.1;Parent=gene-PUW34_23115;Dbxref=NCBI_GP:WJG99118.1;Name=WJG99118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490552.1;locus_tag=PUW34_23115;product=DUF1380 family protein;protein_id=WJG99118.1;transl_table=11 CP118123.1 Genbank gene 86028 86462 . - . ID=gene-PUW34_23120;Name=PUW34_23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23120 CP118123.1 Protein Homology CDS 86028 86462 . - 0 ID=cds-WJG99119.1;Parent=gene-PUW34_23120;Dbxref=NCBI_GP:WJG99119.1;Name=WJG99119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490551.1;locus_tag=PUW34_23120;product=antirestriction protein;protein_id=WJG99119.1;transl_table=11 CP118123.1 Genbank gene 86958 87722 . - . ID=gene-PUW34_23125;Name=PUW34_23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23125 CP118123.1 Protein Homology CDS 86958 87722 . - 0 ID=cds-WJG99120.1;Parent=gene-PUW34_23125;Dbxref=NCBI_GP:WJG99120.1;Name=WJG99120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490550.1;locus_tag=PUW34_23125;product=hypothetical protein;protein_id=WJG99120.1;transl_table=11 CP118123.1 Genbank gene 87794 88207 . - . ID=gene-PUW34_23130;Name=PUW34_23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_23130 CP118123.1 Protein Homology CDS 87794 88207 . - 0 ID=cds-WJG99121.1;Parent=gene-PUW34_23130;Dbxref=NCBI_GP:WJG99121.1;Name=WJG99121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990115.1;locus_tag=PUW34_23130;product=DUF1380 family protein;protein_id=WJG99121.1;transl_table=11 CP118123.1 Genbank gene 88263 88484 . - . ID=gene-PUW34_22590;Name=PUW34_22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW34_22590 CP118123.1 Protein Homology CDS 88263 88484 . - 0 ID=cds-WJG99122.1;Parent=gene-PUW34_22590;Dbxref=NCBI_GP:WJG99122.1;Name=WJG99122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490549.1;locus_tag=PUW34_22590;product=hypothetical protein;protein_id=WJG99122.1;transl_table=11 ###