##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3031648v1 #!genome-build-accession NCBI_Assembly:GCA_030316485.1 #!annotation-date 02/15/2023 11:22:10 #!annotation-source NCBI ##sequence-region CP118132.1 1 4658164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=594 CP118132.1 Genbank region 1 4658164 . + . ID=CP118132.1:1..4658164;Dbxref=taxon:594;Is_circular=true;Name=ANONYMOUS;collection-date=2017-06-09;country=South Africa: KwaZulu-Natal;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Gallus gallus domesticus;serovar=Gallinarum;strain=ZA_432755;sub-species=enterica CP118132.1 Genbank gene 80 145 . + . ID=gene-PUW35_00005;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=PUW35_00005 CP118132.1 Protein Homology CDS 80 145 . + 0 ID=cds-WJG95180.1;Parent=gene-PUW35_00005;Dbxref=NCBI_GP:WJG95180.1;Name=WJG95180.1;Ontology_term=GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=PUW35_00005;product=thr operon leader peptide;protein_id=WJG95180.1;transl_table=11 CP118132.1 cmsearch sequence_feature 81 201 . + . ID=id-CP118132.1:81..201;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118132.1 Genbank gene 227 2689 . + . ID=gene-PUW35_00010;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=PUW35_00010 CP118132.1 Protein Homology CDS 227 2689 . + 0 ID=cds-WJG93158.1;Parent=gene-PUW35_00010;Dbxref=NCBI_GP:WJG93158.1;Name=WJG93158.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=PUW35_00010;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WJG93158.1;transl_table=11 CP118132.1 Genbank gene 2691 3620 . + . ID=gene-PUW35_00015;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=PUW35_00015 CP118132.1 Protein Homology CDS 2691 3620 . + 0 ID=cds-WJG93159.1;Parent=gene-PUW35_00015;Dbxref=NCBI_GP:WJG93159.1;Name=WJG93159.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=PUW35_00015;product=homoserine kinase;protein_id=WJG93159.1;transl_table=11 CP118132.1 Genbank gene 3624 4910 . + . ID=gene-PUW35_00020;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=PUW35_00020 CP118132.1 Protein Homology CDS 3624 4910 . + 0 ID=cds-WJG93160.1;Parent=gene-PUW35_00020;Dbxref=NCBI_GP:WJG93160.1;Name=WJG93160.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=PUW35_00020;product=threonine synthase;protein_id=WJG93160.1;transl_table=11 CP118132.1 Genbank gene 5004 5777 . - . ID=gene-PUW35_00025;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=PUW35_00025 CP118132.1 Protein Homology CDS 5004 5777 . - 0 ID=cds-WJG93161.1;Parent=gene-PUW35_00025;Dbxref=NCBI_GP:WJG93161.1;Name=WJG93161.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=PUW35_00025;product=peroxide stress protein YaaA;protein_id=WJG93161.1;transl_table=11 CP118132.1 Genbank gene 5856 7286 . - . ID=gene-PUW35_00030;Name=PUW35_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00030 CP118132.1 Protein Homology CDS 5856 7286 . - 0 ID=cds-WJG93162.1;Parent=gene-PUW35_00030;Dbxref=NCBI_GP:WJG93162.1;Name=WJG93162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=PUW35_00030;product=sodium:alanine symporter family protein;protein_id=WJG93162.1;transl_table=11 CP118132.1 Genbank gene 7555 8508 . + . ID=gene-PUW35_00035;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PUW35_00035 CP118132.1 Protein Homology CDS 7555 8508 . + 0 ID=cds-WJG93163.1;Parent=gene-PUW35_00035;Dbxref=NCBI_GP:WJG93163.1;Name=WJG93163.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=PUW35_00035;product=transaldolase;protein_id=WJG93163.1;transl_table=11 CP118132.1 Genbank gene 8619 9209 . + . ID=gene-PUW35_00040;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=PUW35_00040 CP118132.1 Protein Homology CDS 8619 9209 . + 0 ID=cds-WJG93164.1;Parent=gene-PUW35_00040;Dbxref=NCBI_GP:WJG93164.1;Name=WJG93164.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=PUW35_00040;product=molybdopterin adenylyltransferase;protein_id=WJG93164.1;transl_table=11 CP118132.1 Genbank gene 9266 9832 . - . ID=gene-PUW35_00045;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=PUW35_00045 CP118132.1 Protein Homology CDS 9266 9832 . - 0 ID=cds-WJG93165.1;Parent=gene-PUW35_00045;Dbxref=NCBI_GP:WJG93165.1;Name=WJG93165.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=PUW35_00045;product=acetate uptake transporter;protein_id=WJG93165.1;transl_table=11 CP118132.1 Genbank pseudogene 9982 10695 . - . ID=gene-PUW35_00050;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=pseudogene;locus_tag=PUW35_00050;pseudo=true CP118132.1 Protein Homology CDS 9982 10695 . - 0 ID=cds-PUW35_00050;Parent=gene-PUW35_00050;Note=internal stop;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=PUW35_00050;product=acidic protein MsyB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 10731 11135 . - . ID=gene-PUW35_00055;Name=PUW35_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00055 CP118132.1 Protein Homology CDS 10731 11135 . - 0 ID=cds-WJG93166.1;Parent=gene-PUW35_00055;Dbxref=NCBI_GP:WJG93166.1;Name=WJG93166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=PUW35_00055;product=DUF2541 family protein;protein_id=WJG93166.1;transl_table=11 CP118132.1 Genbank gene 11483 13399 . + . ID=gene-PUW35_00060;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=PUW35_00060 CP118132.1 Protein Homology CDS 11483 13399 . + 0 ID=cds-WJG93167.1;Parent=gene-PUW35_00060;Dbxref=NCBI_GP:WJG93167.1;Name=WJG93167.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=PUW35_00060;product=molecular chaperone DnaK;protein_id=WJG93167.1;transl_table=11 CP118132.1 Genbank gene 13485 14624 . + . ID=gene-PUW35_00065;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=PUW35_00065 CP118132.1 Protein Homology CDS 13485 14624 . + 0 ID=cds-WJG93168.1;Parent=gene-PUW35_00065;Dbxref=NCBI_GP:WJG93168.1;Name=WJG93168.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=PUW35_00065;product=molecular chaperone DnaJ;protein_id=WJG93168.1;transl_table=11 CP118132.1 Genbank gene 14905 15852 . + . ID=gene-PUW35_00070;Name=PUW35_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00070 CP118132.1 Protein Homology CDS 14905 15852 . + 0 ID=cds-WJG93169.1;Parent=gene-PUW35_00070;Dbxref=NCBI_GP:WJG93169.1;Name=WJG93169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=PUW35_00070;product=LysR family transcriptional regulator;protein_id=WJG93169.1;transl_table=11 CP118132.1 Genbank gene 15979 16323 . + . ID=gene-PUW35_00075;Name=PUW35_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00075 CP118132.1 Protein Homology CDS 15979 16323 . + 0 ID=cds-WJG93170.1;Parent=gene-PUW35_00075;Dbxref=NCBI_GP:WJG93170.1;Name=WJG93170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=PUW35_00075;product=phage holin family protein;protein_id=WJG93170.1;transl_table=11 CP118132.1 Genbank gene 16384 16917 . - . ID=gene-PUW35_00080;Name=PUW35_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00080 CP118132.1 Protein Homology CDS 16384 16917 . - 0 ID=cds-WJG93171.1;Parent=gene-PUW35_00080;Dbxref=NCBI_GP:WJG93171.1;Name=WJG93171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=PUW35_00080;product=glycoside hydrolase family 108 protein;protein_id=WJG93171.1;transl_table=11 CP118132.1 Genbank gene 16934 17377 . - . ID=gene-PUW35_00085;Name=PUW35_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00085 CP118132.1 Protein Homology CDS 16934 17377 . - 0 ID=cds-WJG93172.1;Parent=gene-PUW35_00085;Dbxref=NCBI_GP:WJG93172.1;Name=WJG93172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=PUW35_00085;product=transcriptional regulator;protein_id=WJG93172.1;transl_table=11 CP118132.1 Genbank pseudogene 17758 19854 . + . ID=gene-PUW35_00090;Name=PUW35_00090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00090;pseudo=true CP118132.1 Protein Homology CDS 17758 19854 . + 0 ID=cds-PUW35_00090;Parent=gene-PUW35_00090;Note=frameshifted;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=PUW35_00090;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 19946 22942 . + . ID=gene-PUW35_00095;Name=PUW35_00095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00095;pseudo=true CP118132.1 Protein Homology CDS 19946 22942 . + 0 ID=cds-PUW35_00095;Parent=gene-PUW35_00095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=PUW35_00095;product=chitinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 23222 23926 . + . ID=gene-PUW35_00100;Name=PUW35_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00100 CP118132.1 Protein Homology CDS 23222 23926 . + 0 ID=cds-WJG93173.1;Parent=gene-PUW35_00100;Dbxref=NCBI_GP:WJG93173.1;Name=WJG93173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=PUW35_00100;product=helix-turn-helix domain-containing protein;protein_id=WJG93173.1;transl_table=11 CP118132.1 Genbank gene 24356 24898 . + . ID=gene-PUW35_00105;Name=PUW35_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00105 CP118132.1 Protein Homology CDS 24356 24898 . + 0 ID=cds-WJG93174.1;Parent=gene-PUW35_00105;Dbxref=NCBI_GP:WJG93174.1;Name=WJG93174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=PUW35_00105;product=fimbrial protein BcfA;protein_id=WJG93174.1;transl_table=11 CP118132.1 Genbank gene 24999 25685 . + . ID=gene-PUW35_00110;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=PUW35_00110 CP118132.1 Protein Homology CDS 24999 25685 . + 0 ID=cds-WJG93175.1;Parent=gene-PUW35_00110;Dbxref=NCBI_GP:WJG93175.1;Name=WJG93175.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=PUW35_00110;product=fimbrial biogenesis chaperone BcfB;protein_id=WJG93175.1;transl_table=11 CP118132.1 Genbank gene 25690 28311 . + . ID=gene-PUW35_00115;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=PUW35_00115 CP118132.1 Protein Homology CDS 25690 28311 . + 0 ID=cds-WJG95181.1;Parent=gene-PUW35_00115;Dbxref=NCBI_GP:WJG95181.1;Name=WJG95181.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=PUW35_00115;product=fimbrial usher BcfC;protein_id=WJG95181.1;transl_table=11 CP118132.1 Genbank gene 28312 29319 . + . ID=gene-PUW35_00120;Name=PUW35_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00120 CP118132.1 Protein Homology CDS 28312 29319 . + 0 ID=cds-WJG93176.1;Parent=gene-PUW35_00120;Dbxref=NCBI_GP:WJG93176.1;Name=WJG93176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=PUW35_00120;product=fimbrial protein BcfD;protein_id=WJG93176.1;transl_table=11 CP118132.1 Genbank gene 29320 29865 . + . ID=gene-PUW35_00125;Name=PUW35_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00125 CP118132.1 Protein Homology CDS 29320 29865 . + 0 ID=cds-WJG93177.1;Parent=gene-PUW35_00125;Dbxref=NCBI_GP:WJG93177.1;Name=WJG93177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=PUW35_00125;product=fimbrial protein BcfE;protein_id=WJG93177.1;transl_table=11 CP118132.1 Genbank gene 29881 30399 . + . ID=gene-PUW35_00130;Name=PUW35_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00130 CP118132.1 Protein Homology CDS 29881 30399 . + 0 ID=cds-WJG93178.1;Parent=gene-PUW35_00130;Dbxref=NCBI_GP:WJG93178.1;Name=WJG93178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=PUW35_00130;product=fimbrial protein BcfF;protein_id=WJG93178.1;transl_table=11 CP118132.1 Genbank gene 30365 31096 . + . ID=gene-PUW35_00135;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=PUW35_00135 CP118132.1 Protein Homology CDS 30365 31096 . + 0 ID=cds-WJG93179.1;Parent=gene-PUW35_00135;Dbxref=NCBI_GP:WJG93179.1;Name=WJG93179.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=PUW35_00135;product=fimbrial chaperone BcfG;protein_id=WJG93179.1;transl_table=11 CP118132.1 Genbank pseudogene 31160 32003 . + . ID=gene-PUW35_00140;Name=PUW35_00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00140;pseudo=true CP118132.1 Protein Homology CDS 31160 32003 . + 0 ID=cds-PUW35_00140;Parent=gene-PUW35_00140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=PUW35_00140;product=DsbA family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 32042 32329 . + . ID=gene-PUW35_00145;Name=PUW35_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00145 CP118132.1 Protein Homology CDS 32042 32329 . + 0 ID=cds-WJG93180.1;Parent=gene-PUW35_00145;Dbxref=NCBI_GP:WJG93180.1;Name=WJG93180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=PUW35_00145;product=hypothetical protein;protein_id=WJG93180.1;transl_table=11 CP118132.1 Genbank gene 32429 32878 . - . ID=gene-PUW35_00150;Name=PUW35_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00150 CP118132.1 Protein Homology CDS 32429 32878 . - 0 ID=cds-WJG93181.1;Parent=gene-PUW35_00150;Dbxref=NCBI_GP:WJG93181.1;Name=WJG93181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=PUW35_00150;product=transcriptional regulator;protein_id=WJG93181.1;transl_table=11 CP118132.1 Genbank gene 33248 34252 . + . ID=gene-PUW35_00155;Name=PUW35_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00155 CP118132.1 Protein Homology CDS 33248 34252 . + 0 ID=cds-WJG93182.1;Parent=gene-PUW35_00155;Dbxref=NCBI_GP:WJG93182.1;Name=WJG93182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=PUW35_00155;product=LysR family transcriptional regulator;protein_id=WJG93182.1;transl_table=11 CP118132.1 Genbank pseudogene 34260 34699 . - . ID=gene-PUW35_00160;Name=PUW35_00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00160;pseudo=true CP118132.1 Protein Homology CDS 34260 34699 . - 0 ID=cds-PUW35_00160;Parent=gene-PUW35_00160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=PUW35_00160;product=transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 35222 36940 . + . ID=gene-PUW35_00165;Name=PUW35_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00165 CP118132.1 Protein Homology CDS 35222 36940 . + 0 ID=cds-WJG93183.1;Parent=gene-PUW35_00165;Dbxref=NCBI_GP:WJG93183.1;Name=WJG93183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=PUW35_00165;product=aryl-sulfate sulfotransferase;protein_id=WJG93183.1;transl_table=11 CP118132.1 Genbank pseudogene 36986 38556 . - . ID=gene-PUW35_00170;Name=PUW35_00170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00170;pseudo=true CP118132.1 Protein Homology CDS 36986 38556 . - 0 ID=cds-PUW35_00170;Parent=gene-PUW35_00170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=PUW35_00170;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 38655 39416 . - . ID=gene-PUW35_00175;Name=PUW35_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00175 CP118132.1 Protein Homology CDS 38655 39416 . - 0 ID=cds-WJG93184.1;Parent=gene-PUW35_00175;Dbxref=NCBI_GP:WJG93184.1;Name=WJG93184.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=PUW35_00175;product=outer membrane protein OmpK;protein_id=WJG93184.1;transl_table=11 CP118132.1 Genbank pseudogene 40010 41502 . + . ID=gene-PUW35_00180;Name=PUW35_00180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00180;pseudo=true CP118132.1 Protein Homology CDS 40010 41502 . + 0 ID=cds-PUW35_00180;Parent=gene-PUW35_00180;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=PUW35_00180;product=sulfatase-like hydrolase/transferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 41601 42791 . + . ID=gene-PUW35_00185;Name=PUW35_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00185 CP118132.1 Protein Homology CDS 41601 42791 . + 0 ID=cds-WJG93185.1;Parent=gene-PUW35_00185;Dbxref=NCBI_GP:WJG93185.1;Name=WJG93185.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=PUW35_00185;product=anaerobic sulfatase maturase;protein_id=WJG93185.1;transl_table=11 CP118132.1 Genbank gene 42810 44063 . + . ID=gene-PUW35_00190;Name=PUW35_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00190 CP118132.1 Protein Homology CDS 42810 44063 . + 0 ID=cds-WJG93186.1;Parent=gene-PUW35_00190;Dbxref=NCBI_GP:WJG93186.1;Name=WJG93186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=PUW35_00190;product=cytoplasmic protein;protein_id=WJG93186.1;transl_table=11 CP118132.1 Genbank gene 44190 45905 . + . ID=gene-PUW35_00195;Name=PUW35_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00195 CP118132.1 Protein Homology CDS 44190 45905 . + 0 ID=cds-WJG93187.1;Parent=gene-PUW35_00195;Dbxref=NCBI_GP:WJG93187.1;Name=WJG93187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=PUW35_00195;product=aryl-sulfate sulfotransferase;protein_id=WJG93187.1;transl_table=11 CP118132.1 Genbank pseudogene 46143 47233 . + . ID=gene-PUW35_00200;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=pseudogene;locus_tag=PUW35_00200;pseudo=true CP118132.1 Protein Homology CDS 46143 47233 . + 0 ID=cds-PUW35_00200;Parent=gene-PUW35_00200;Note=frameshifted;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF018648.2;locus_tag=PUW35_00200;product=Na+/H+ antiporter NhaA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 47295 48194 . + . ID=gene-PUW35_00205;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=PUW35_00205 CP118132.1 Protein Homology CDS 47295 48194 . + 0 ID=cds-WJG93188.1;Parent=gene-PUW35_00205;Dbxref=NCBI_GP:WJG93188.1;Name=WJG93188.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=PUW35_00205;product=transcriptional activator NhaR;protein_id=WJG93188.1;transl_table=11 CP118132.1 Genbank gene 48249 50288 . - . ID=gene-PUW35_00210;Name=PUW35_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00210 CP118132.1 Protein Homology CDS 48249 50288 . - 0 ID=cds-WJG93189.1;Parent=gene-PUW35_00210;Dbxref=NCBI_GP:WJG93189.1;Name=WJG93189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=PUW35_00210;product=glycoside hydrolase family 31 protein;protein_id=WJG93189.1;transl_table=11 CP118132.1 Genbank pseudogene 50328 51699 . - . ID=gene-PUW35_00215;Name=PUW35_00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00215;pseudo=true CP118132.1 Protein Homology CDS 50328 51699 . - 0 ID=cds-PUW35_00215;Parent=gene-PUW35_00215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=PUW35_00215;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 52155 52418 . - . ID=gene-PUW35_00220;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=PUW35_00220 CP118132.1 Protein Homology CDS 52155 52418 . - 0 ID=cds-WJG93190.1;Parent=gene-PUW35_00220;Dbxref=NCBI_GP:WJG93190.1;Name=WJG93190.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=PUW35_00220;product=30S ribosomal protein S20;protein_id=WJG93190.1;transl_table=11 CP118132.1 Genbank gene 52524 52739 . + . ID=gene-PUW35_00225;Name=PUW35_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00225 CP118132.1 Protein Homology CDS 52524 52739 . + 0 ID=cds-WJG93191.1;Parent=gene-PUW35_00225;Dbxref=NCBI_GP:WJG93191.1;Name=WJG93191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=PUW35_00225;product=YaaY family protein;protein_id=WJG93191.1;transl_table=11 CP118132.1 Genbank gene 52747 53685 . + . ID=gene-PUW35_00230;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=PUW35_00230 CP118132.1 Protein Homology CDS 52747 53685 . + 0 ID=cds-WJG93192.1;Parent=gene-PUW35_00230;Dbxref=NCBI_GP:WJG93192.1;Name=WJG93192.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=PUW35_00230;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WJG93192.1;transl_table=11 CP118132.1 Genbank gene 53730 56564 . + . ID=gene-PUW35_00235;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=PUW35_00235 CP118132.1 Protein Homology CDS 53730 56564 . + 0 ID=cds-WJG93193.1;Parent=gene-PUW35_00235;Dbxref=NCBI_GP:WJG93193.1;Name=WJG93193.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=PUW35_00235;product=isoleucine--tRNA ligase;protein_id=WJG93193.1;transl_table=11 CP118132.1 Genbank gene 56564 57064 . + . ID=gene-PUW35_00240;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=PUW35_00240 CP118132.1 Protein Homology CDS 56564 57064 . + 0 ID=cds-WJG93194.1;Parent=gene-PUW35_00240;Dbxref=NCBI_GP:WJG93194.1;Name=WJG93194.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=PUW35_00240;product=signal peptidase II;protein_id=WJG93194.1;transl_table=11 CP118132.1 Genbank gene 57219 57668 . + . ID=gene-PUW35_00245;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=PUW35_00245 CP118132.1 Protein Homology CDS 57219 57668 . + 0 ID=cds-WJG93195.1;Parent=gene-PUW35_00245;Dbxref=NCBI_GP:WJG93195.1;Name=WJG93195.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=PUW35_00245;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJG93195.1;transl_table=11 CP118132.1 Genbank gene 57671 58621 . + . ID=gene-PUW35_00250;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=PUW35_00250 CP118132.1 Protein Homology CDS 57671 58621 . + 0 ID=cds-WJG93196.1;Parent=gene-PUW35_00250;Dbxref=NCBI_GP:WJG93196.1;Name=WJG93196.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=PUW35_00250;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WJG93196.1;transl_table=11 CP118132.1 Genbank gene 58821 60023 . + . ID=gene-PUW35_00255;Name=PUW35_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00255 CP118132.1 Protein Homology CDS 58821 60023 . + 0 ID=cds-WJG93197.1;Parent=gene-PUW35_00255;Dbxref=NCBI_GP:WJG93197.1;Name=WJG93197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=PUW35_00255;product=nitrite reductase;protein_id=WJG93197.1;transl_table=11 CP118132.1 Genbank pseudogene 60039 60958 . + . ID=gene-PUW35_00260;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=pseudogene;locus_tag=PUW35_00260;pseudo=true CP118132.1 Protein Homology CDS 60039 60958 . + 0 ID=cds-PUW35_00260;Parent=gene-PUW35_00260;Note=frameshifted;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=PUW35_00260;product=ribonucleoside hydrolase RihC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 60980 61663 . - . ID=gene-PUW35_00265;Name=PUW35_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00265 CP118132.1 Protein Homology CDS 60980 61663 . - 0 ID=cds-WJG93198.1;Parent=gene-PUW35_00265;Dbxref=NCBI_GP:WJG93198.1;Name=WJG93198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=PUW35_00265;product=response regulator;protein_id=WJG93198.1;transl_table=11 CP118132.1 Genbank pseudogene 61665 63283 . - . ID=gene-PUW35_00270;Name=PUW35_00270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00270;pseudo=true CP118132.1 Protein Homology CDS 61665 63283 . - 0 ID=cds-PUW35_00270;Parent=gene-PUW35_00270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=PUW35_00270;product=sensor histidine kinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 63418 64719 . - . ID=gene-PUW35_00275;Name=PUW35_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00275 CP118132.1 Protein Homology CDS 63418 64719 . - 0 ID=cds-WJG93199.1;Parent=gene-PUW35_00275;Dbxref=NCBI_GP:WJG93199.1;Name=WJG93199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW35_00275;product=oxalacetate decarboxylase subunit beta;protein_id=WJG93199.1;transl_table=11 CP118132.1 Genbank gene 64732 66504 . - . ID=gene-PUW35_00280;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW35_00280 CP118132.1 Protein Homology CDS 64732 66504 . - 0 ID=cds-WJG93200.1;Parent=gene-PUW35_00280;Dbxref=NCBI_GP:WJG93200.1;Name=WJG93200.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW35_00280;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJG93200.1;transl_table=11 CP118132.1 Genbank gene 66521 66760 . - . ID=gene-PUW35_00285;Name=PUW35_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00285 CP118132.1 Protein Homology CDS 66521 66760 . - 0 ID=cds-WJG93201.1;Parent=gene-PUW35_00285;Dbxref=NCBI_GP:WJG93201.1;Name=WJG93201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=PUW35_00285;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJG93201.1;transl_table=11 CP118132.1 Genbank pseudogene 66919 68257 . - . ID=gene-PUW35_00290;Name=citS;gbkey=Gene;gene=citS;gene_biotype=pseudogene;locus_tag=PUW35_00290;pseudo=true CP118132.1 Protein Homology CDS 66919 68257 . - 0 ID=cds-PUW35_00290;Parent=gene-PUW35_00290;Note=frameshifted;gbkey=CDS;gene=citS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=PUW35_00290;product=citrate/sodium symporter CitS;pseudo=true;transl_table=11 CP118132.1 Genbank gene 68502 69545 . + . ID=gene-PUW35_00295;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PUW35_00295 CP118132.1 Protein Homology CDS 68502 69545 . + 0 ID=cds-WJG93202.1;Parent=gene-PUW35_00295;Dbxref=NCBI_GP:WJG93202.1;Name=WJG93202.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=PUW35_00295;product=[citrate (pro-3S)-lyase] ligase;protein_id=WJG93202.1;transl_table=11 CP118132.1 Genbank gene 69575 69868 . + . ID=gene-PUW35_00300;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PUW35_00300 CP118132.1 Protein Homology CDS 69575 69868 . + 0 ID=cds-WJG93203.1;Parent=gene-PUW35_00300;Dbxref=NCBI_GP:WJG93203.1;Name=WJG93203.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=PUW35_00300;product=citrate lyase acyl carrier protein;protein_id=WJG93203.1;transl_table=11 CP118132.1 Genbank gene 69865 70734 . + . ID=gene-PUW35_00305;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PUW35_00305 CP118132.1 Protein Homology CDS 69865 70734 . + 0 ID=cds-WJG93204.1;Parent=gene-PUW35_00305;Dbxref=NCBI_GP:WJG93204.1;Name=WJG93204.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=PUW35_00305;product=citrate (pro-3S)-lyase subunit beta;protein_id=WJG93204.1;transl_table=11 CP118132.1 Genbank gene 70745 72265 . + . ID=gene-PUW35_00310;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PUW35_00310 CP118132.1 Protein Homology CDS 70745 72265 . + 0 ID=cds-WJG93205.1;Parent=gene-PUW35_00310;Dbxref=NCBI_GP:WJG93205.1;Name=WJG93205.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=PUW35_00310;product=citrate lyase subunit alpha;protein_id=WJG93205.1;transl_table=11 CP118132.1 Genbank gene 72265 72816 . + . ID=gene-PUW35_00315;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PUW35_00315 CP118132.1 Protein Homology CDS 72265 72816 . + 0 ID=cds-WJG93206.1;Parent=gene-PUW35_00315;Dbxref=NCBI_GP:WJG93206.1;Name=WJG93206.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=PUW35_00315;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WJG93206.1;transl_table=11 CP118132.1 Genbank gene 72794 73702 . + . ID=gene-PUW35_00320;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PUW35_00320 CP118132.1 Protein Homology CDS 72794 73702 . + 0 ID=cds-WJG93207.1;Parent=gene-PUW35_00320;Dbxref=NCBI_GP:WJG93207.1;Name=WJG93207.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=citG;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=PUW35_00320;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WJG93207.1;transl_table=11 CP118132.1 Genbank gene 73882 74703 . + . ID=gene-PUW35_00325;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=PUW35_00325 CP118132.1 Protein Homology CDS 73882 74703 . + 0 ID=cds-WJG93208.1;Parent=gene-PUW35_00325;Dbxref=NCBI_GP:WJG93208.1;Name=WJG93208.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=PUW35_00325;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WJG93208.1;transl_table=11 CP118132.1 Genbank pseudogene 75566 76713 . + . ID=gene-PUW35_00330;Name=carA;gbkey=Gene;gene=carA;gene_biotype=pseudogene;locus_tag=PUW35_00330;pseudo=true CP118132.1 Protein Homology CDS 75566 76713 . + 0 ID=cds-PUW35_00330;Parent=gene-PUW35_00330;Note=frameshifted;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=PUW35_00330;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 76732 79959 . + . ID=gene-PUW35_00335;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=PUW35_00335 CP118132.1 Protein Homology CDS 76732 79959 . + 0 ID=cds-WJG93209.1;Parent=gene-PUW35_00335;Dbxref=NCBI_GP:WJG93209.1;Name=WJG93209.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=PUW35_00335;product=carbamoyl-phosphate synthase large subunit;protein_id=WJG93209.1;transl_table=11 CP118132.1 Genbank gene 80233 80628 . + . ID=gene-PUW35_00340;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=PUW35_00340 CP118132.1 Protein Homology CDS 80233 80628 . + 0 ID=cds-WJG93210.1;Parent=gene-PUW35_00340;Dbxref=NCBI_GP:WJG93210.1;Name=WJG93210.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=PUW35_00340;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WJG93210.1;transl_table=11 CP118132.1 Genbank gene 80706 81302 . - . ID=gene-PUW35_00345;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=PUW35_00345 CP118132.1 Protein Homology CDS 80706 81302 . - 0 ID=cds-WJG93211.1;Parent=gene-PUW35_00345;Dbxref=NCBI_GP:WJG93211.1;Name=WJG93211.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=PUW35_00345;product=carnitine operon protein CaiE;protein_id=WJG93211.1;transl_table=11 CP118132.1 Genbank gene 81412 82197 . - . ID=gene-PUW35_00350;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=PUW35_00350 CP118132.1 Protein Homology CDS 81412 82197 . - 0 ID=cds-WJG93212.1;Parent=gene-PUW35_00350;Dbxref=NCBI_GP:WJG93212.1;Name=WJG93212.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=PUW35_00350;product=crotonobetainyl-CoA hydratase;protein_id=WJG93212.1;transl_table=11 CP118132.1 Genbank pseudogene 82251 83804 . - . ID=gene-PUW35_00355;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=pseudogene;locus_tag=PUW35_00355;pseudo=true CP118132.1 Protein Homology CDS 82251 83804 . - 0 ID=cds-PUW35_00355;Parent=gene-PUW35_00355;Note=internal stop;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=PUW35_00355;product=crotonobetaine/carnitine-CoA ligase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 83867 85084 . - . ID=gene-PUW35_00360;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=PUW35_00360 CP118132.1 Protein Homology CDS 83867 85084 . - 0 ID=cds-WJG95182.1;Parent=gene-PUW35_00360;Dbxref=NCBI_GP:WJG95182.1;Name=WJG95182.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=PUW35_00360;product=L-carnitine CoA-transferase;protein_id=WJG95182.1;transl_table=11 CP118132.1 Genbank gene 85196 86338 . - . ID=gene-PUW35_00365;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=PUW35_00365 CP118132.1 Protein Homology CDS 85196 86338 . - 0 ID=cds-WJG93213.1;Parent=gene-PUW35_00365;Dbxref=NCBI_GP:WJG93213.1;Name=WJG93213.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=PUW35_00365;product=crotonobetainyl-CoA dehydrogenase;protein_id=WJG93213.1;transl_table=11 CP118132.1 Genbank gene 86373 87890 . - . ID=gene-PUW35_00370;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=PUW35_00370 CP118132.1 Protein Homology CDS 86373 87890 . - 0 ID=cds-WJG93214.1;Parent=gene-PUW35_00370;Dbxref=NCBI_GP:WJG93214.1;Name=WJG93214.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=PUW35_00370;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WJG93214.1;transl_table=11 CP118132.1 Genbank gene 88371 89141 . + . ID=gene-PUW35_00375;Name=PUW35_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00375 CP118132.1 Protein Homology CDS 88371 89141 . + 0 ID=cds-WJG93215.1;Parent=gene-PUW35_00375;Dbxref=NCBI_GP:WJG93215.1;Name=WJG93215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=PUW35_00375;product=electron transfer flavoprotein FixA;protein_id=WJG93215.1;transl_table=11 CP118132.1 Genbank gene 89157 90098 . + . ID=gene-PUW35_00380;Name=PUW35_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00380 CP118132.1 Protein Homology CDS 89157 90098 . + 0 ID=cds-WJG93216.1;Parent=gene-PUW35_00380;Dbxref=NCBI_GP:WJG93216.1;Name=WJG93216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=PUW35_00380;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WJG93216.1;transl_table=11 CP118132.1 Genbank gene 90148 91434 . + . ID=gene-PUW35_00385;Name=PUW35_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00385 CP118132.1 Protein Homology CDS 90148 91434 . + 0 ID=cds-WJG93217.1;Parent=gene-PUW35_00385;Dbxref=NCBI_GP:WJG93217.1;Name=WJG93217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=PUW35_00385;product=FAD-dependent oxidoreductase;protein_id=WJG93217.1;transl_table=11 CP118132.1 Genbank pseudogene 91431 91717 . + . ID=gene-PUW35_00390;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=pseudogene;locus_tag=PUW35_00390;pseudo=true CP118132.1 Protein Homology CDS 91431 91717 . + 0 ID=cds-PUW35_00390;Parent=gene-PUW35_00390;Note=frameshifted;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=PUW35_00390;product=ferredoxin-like protein FixX;pseudo=true;transl_table=11 CP118132.1 Genbank gene 91864 93204 . + . ID=gene-PUW35_00395;Name=PUW35_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00395 CP118132.1 Protein Homology CDS 91864 93204 . + 0 ID=cds-WJG93218.1;Parent=gene-PUW35_00395;Dbxref=NCBI_GP:WJG93218.1;Name=WJG93218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746786.1;locus_tag=PUW35_00395;product=MFS transporter;protein_id=WJG93218.1;transl_table=11 CP118132.1 Genbank gene 93293 93523 . + . ID=gene-PUW35_00400;Name=PUW35_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00400 CP118132.1 Protein Homology CDS 93293 93523 . + 0 ID=cds-WJG93219.1;Parent=gene-PUW35_00400;Dbxref=NCBI_GP:WJG93219.1;Name=WJG93219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=PUW35_00400;product=YgdI/YgdR family lipoprotein;protein_id=WJG93219.1;transl_table=11 CP118132.1 Genbank pseudogene 93815 94230 . + . ID=gene-PUW35_00405;Name=PUW35_00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00405;pseudo=true CP118132.1 Protein Homology CDS 93815 94230 . + 0 ID=cds-PUW35_00405;Parent=gene-PUW35_00405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=PUW35_00405;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 94454 94744 . - . ID=gene-PUW35_00410;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=PUW35_00410 CP118132.1 Protein Homology CDS 94454 94744 . - 0 ID=cds-WJG93220.1;Parent=gene-PUW35_00410;Dbxref=NCBI_GP:WJG93220.1;Name=WJG93220.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=PUW35_00410;product=DUF1471 family virulence protein SrfN;protein_id=WJG93220.1;transl_table=11 CP118132.1 Genbank gene 95642 97531 . + . ID=gene-PUW35_00415;Name=PUW35_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00415 CP118132.1 Protein Homology CDS 95642 97531 . + 0 ID=cds-WJG93221.1;Parent=gene-PUW35_00415;Dbxref=NCBI_GP:WJG93221.1;Name=WJG93221.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=PUW35_00415;product=sulfatase-like hydrolase/transferase;protein_id=WJG93221.1;transl_table=11 CP118132.1 Genbank gene 97938 98468 . + . ID=gene-PUW35_00420;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=PUW35_00420 CP118132.1 Protein Homology CDS 97938 98468 . + 0 ID=cds-WJG93222.1;Parent=gene-PUW35_00420;Dbxref=NCBI_GP:WJG93222.1;Name=WJG93222.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=PUW35_00420;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WJG93222.1;transl_table=11 CP118132.1 Genbank gene 98461 100329 . + . ID=gene-PUW35_00425;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=PUW35_00425 CP118132.1 Protein Homology CDS 98461 100329 . + 0 ID=cds-WJG93223.1;Parent=gene-PUW35_00425;Dbxref=NCBI_GP:WJG93223.1;Name=WJG93223.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=PUW35_00425;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WJG93223.1;transl_table=11 CP118132.1 Genbank gene 100528 101007 . + . ID=gene-PUW35_00430;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=PUW35_00430 CP118132.1 Protein Homology CDS 100528 101007 . + 0 ID=cds-WJG93224.1;Parent=gene-PUW35_00430;Dbxref=NCBI_GP:WJG93224.1;Name=WJG93224.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=PUW35_00430;product=type 3 dihydrofolate reductase;protein_id=WJG93224.1;transl_table=11 CP118132.1 Genbank gene 101113 101961 . - . ID=gene-PUW35_00435;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=PUW35_00435 CP118132.1 Protein Homology CDS 101113 101961 . - 0 ID=cds-WJG93225.1;Parent=gene-PUW35_00435;Dbxref=NCBI_GP:WJG93225.1;Name=WJG93225.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=PUW35_00435;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WJG93225.1;transl_table=11 CP118132.1 Genbank gene 101972 102349 . - . ID=gene-PUW35_00440;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=PUW35_00440 CP118132.1 Protein Homology CDS 101972 102349 . - 0 ID=cds-WJG93226.1;Parent=gene-PUW35_00440;Dbxref=NCBI_GP:WJG93226.1;Name=WJG93226.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=PUW35_00440;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WJG93226.1;transl_table=11 CP118132.1 Genbank gene 102352 103173 . - . ID=gene-PUW35_00445;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=PUW35_00445 CP118132.1 Protein Homology CDS 102352 103173 . - 0 ID=cds-WJG93227.1;Parent=gene-PUW35_00445;Dbxref=NCBI_GP:WJG93227.1;Name=WJG93227.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=PUW35_00445;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WJG93227.1;transl_table=11 CP118132.1 Genbank gene 103170 104159 . - . ID=gene-PUW35_00450;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=PUW35_00450 CP118132.1 Protein Homology CDS 103170 104159 . - 0 ID=cds-WJG93228.1;Parent=gene-PUW35_00450;Dbxref=NCBI_GP:WJG93228.1;Name=WJG93228.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=PUW35_00450;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WJG93228.1;transl_table=11 CP118132.1 Genbank gene 104159 105445 . - . ID=gene-PUW35_00455;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=PUW35_00455 CP118132.1 Protein Homology CDS 104159 105445 . - 0 ID=cds-WJG93229.1;Parent=gene-PUW35_00455;Dbxref=NCBI_GP:WJG93229.1;Name=WJG93229.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=PUW35_00455;product=peptidylprolyl isomerase SurA;protein_id=WJG93229.1;transl_table=11 CP118132.1 Genbank gene 105499 107859 . - . ID=gene-PUW35_00460;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=PUW35_00460 CP118132.1 Protein Homology CDS 105499 107859 . - 0 ID=cds-WJG93230.1;Parent=gene-PUW35_00460;Dbxref=NCBI_GP:WJG93230.1;Name=WJG93230.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=PUW35_00460;product=LPS assembly protein LptD;protein_id=WJG93230.1;transl_table=11 CP118132.1 Genbank gene 108113 108925 . + . ID=gene-PUW35_00465;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=PUW35_00465 CP118132.1 Protein Homology CDS 108113 108925 . + 0 ID=cds-WJG93231.1;Parent=gene-PUW35_00465;Dbxref=NCBI_GP:WJG93231.1;Name=WJG93231.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=PUW35_00465;product=co-chaperone DjlA;protein_id=WJG93231.1;transl_table=11 CP118132.1 Genbank gene 109020 109679 . - . ID=gene-PUW35_00470;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=PUW35_00470 CP118132.1 Protein Homology CDS 109020 109679 . - 0 ID=cds-WJG93232.1;Parent=gene-PUW35_00470;Dbxref=NCBI_GP:WJG93232.1;Name=WJG93232.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=PUW35_00470;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WJG93232.1;transl_table=11 CP118132.1 Genbank gene 109691 112597 . - . ID=gene-PUW35_00475;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=PUW35_00475 CP118132.1 Protein Homology CDS 109691 112597 . - 0 ID=cds-WJG93233.1;Parent=gene-PUW35_00475;Dbxref=NCBI_GP:WJG93233.1;Name=WJG93233.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=PUW35_00475;product=RNA polymerase-associated protein RapA;protein_id=WJG93233.1;transl_table=11 CP118132.1 Genbank pseudogene 112771 115121 . - . ID=gene-PUW35_00480;Name=polB;gbkey=Gene;gene=polB;gene_biotype=pseudogene;locus_tag=PUW35_00480;pseudo=true CP118132.1 Protein Homology CDS 112771 115121 . - 0 ID=cds-PUW35_00480;Parent=gene-PUW35_00480;Note=frameshifted;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=PUW35_00480;product=DNA polymerase II;pseudo=true;transl_table=11 CP118132.1 Genbank gene 115165 115785 . - . ID=gene-PUW35_00485;Name=PUW35_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00485 CP118132.1 Protein Homology CDS 115165 115785 . - 0 ID=cds-WJG93234.1;Parent=gene-PUW35_00485;Dbxref=NCBI_GP:WJG93234.1;Name=WJG93234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=PUW35_00485;product=YdcF family protein;protein_id=WJG93234.1;transl_table=11 CP118132.1 Genbank gene 116303 116722 . + . ID=gene-PUW35_00490;Name=PUW35_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00490 CP118132.1 Protein Homology CDS 116303 116722 . + 0 ID=cds-WJG93235.1;Parent=gene-PUW35_00490;Dbxref=NCBI_GP:WJG93235.1;Name=WJG93235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=PUW35_00490;product=DUF4751 family protein;protein_id=WJG93235.1;transl_table=11 CP118132.1 Genbank gene 116728 117423 . - . ID=gene-PUW35_00495;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PUW35_00495 CP118132.1 Protein Homology CDS 116728 117423 . - 0 ID=cds-WJG93236.1;Parent=gene-PUW35_00495;Dbxref=NCBI_GP:WJG93236.1;Name=WJG93236.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=PUW35_00495;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJG93236.1;transl_table=11 CP118132.1 Genbank gene 117564 119066 . - . ID=gene-PUW35_00500;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=PUW35_00500 CP118132.1 Protein Homology CDS 117564 119066 . - 0 ID=cds-WJG93237.1;Parent=gene-PUW35_00500;Dbxref=NCBI_GP:WJG93237.1;Name=WJG93237.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=PUW35_00500;product=L-arabinose isomerase;protein_id=WJG93237.1;transl_table=11 CP118132.1 Genbank gene 119077 120786 . - . ID=gene-PUW35_00505;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=PUW35_00505 CP118132.1 Protein Homology CDS 119077 120786 . - 0 ID=cds-WJG93238.1;Parent=gene-PUW35_00505;Dbxref=NCBI_GP:WJG93238.1;Name=WJG93238.1;Ontology_term=GO:0019568,GO:0008741;gbkey=CDS;gene=araB;go_function=ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=PUW35_00505;product=ribulokinase;protein_id=WJG93238.1;transl_table=11 CP118132.1 Genbank gene 121125 121970 . + . ID=gene-PUW35_00510;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=PUW35_00510 CP118132.1 Protein Homology CDS 121125 121970 . + 0 ID=cds-WJG93239.1;Parent=gene-PUW35_00510;Dbxref=NCBI_GP:WJG93239.1;Name=WJG93239.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=PUW35_00510;product=arabinose operon transcriptional regulator AraC;protein_id=WJG93239.1;transl_table=11 CP118132.1 Genbank pseudogene 122089 122855 . + . ID=gene-PUW35_00515;Name=PUW35_00515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00515;pseudo=true CP118132.1 Protein Homology CDS 122089 122855 . + 0 ID=cds-PUW35_00515;Parent=gene-PUW35_00515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=PUW35_00515;product=DedA family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 122894 123601 . - . ID=gene-PUW35_00520;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=PUW35_00520 CP118132.1 Protein Homology CDS 122894 123601 . - 0 ID=cds-WJG93240.1;Parent=gene-PUW35_00520;Dbxref=NCBI_GP:WJG93240.1;Name=WJG93240.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=PUW35_00520;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WJG93240.1;transl_table=11 CP118132.1 Genbank gene 123585 125195 . - . ID=gene-PUW35_00525;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=PUW35_00525 CP118132.1 Protein Homology CDS 123585 125195 . - 0 ID=cds-WJG93241.1;Parent=gene-PUW35_00525;Dbxref=NCBI_GP:WJG93241.1;Name=WJG93241.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=PUW35_00525;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WJG93241.1;transl_table=11 CP118132.1 Genbank gene 125171 126154 . - . ID=gene-PUW35_00530;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=PUW35_00530 CP118132.1 Protein Homology CDS 125171 126154 . - 0 ID=cds-WJG93242.1;Parent=gene-PUW35_00530;Dbxref=NCBI_GP:WJG93242.1;Name=WJG93242.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=PUW35_00530;product=thiamine ABC transporter substrate binding subunit;protein_id=WJG93242.1;transl_table=11 CP118132.1 cmsearch riboswitch 126186 126285 . - . ID=id-CP118132.1:126186..126285;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118132.1 Genbank gene 126332 127990 . - . ID=gene-PUW35_00535;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=PUW35_00535 CP118132.1 Protein Homology CDS 126332 127990 . - 0 ID=cds-WJG93243.1;Parent=gene-PUW35_00535;Dbxref=NCBI_GP:WJG93243.1;Name=WJG93243.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=PUW35_00535;product=HTH-type transcriptional regulator SgrR;protein_id=WJG93243.1;transl_table=11 CP118132.1 Genbank gene 128083 128205 . + . ID=gene-PUW35_00540;Name=PUW35_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00540 CP118132.1 Protein Homology CDS 128083 128205 . + 0 ID=cds-WJG94989.1;Parent=gene-PUW35_00540;Dbxref=NCBI_GP:WJG94989.1;Name=WJG94989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=PUW35_00540;product=glucose uptake inhibitor SgrT;protein_id=WJG94989.1;transl_table=11 CP118132.1 Genbank gene 128525 128806 . + . ID=gene-PUW35_00545;Name=PUW35_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00545 CP118132.1 Protein Homology CDS 128525 128806 . + 0 ID=cds-WJG93244.1;Parent=gene-PUW35_00545;Dbxref=NCBI_GP:WJG93244.1;Name=WJG93244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264185.1;locus_tag=PUW35_00545;product=DUF5339 family protein;protein_id=WJG93244.1;transl_table=11 CP118132.1 Genbank gene 128860 129465 . - . ID=gene-PUW35_00550;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PUW35_00550 CP118132.1 Protein Homology CDS 128860 129465 . - 0 ID=cds-WJG93245.1;Parent=gene-PUW35_00550;Dbxref=NCBI_GP:WJG93245.1;Name=WJG93245.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=PUW35_00550;product=3-isopropylmalate dehydratase small subunit;protein_id=WJG93245.1;transl_table=11 CP118132.1 Genbank gene 129476 130876 . - . ID=gene-PUW35_00555;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PUW35_00555 CP118132.1 Protein Homology CDS 129476 130876 . - 0 ID=cds-WJG93246.1;Parent=gene-PUW35_00555;Dbxref=NCBI_GP:WJG93246.1;Name=WJG93246.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=PUW35_00555;product=3-isopropylmalate dehydratase large subunit;protein_id=WJG93246.1;transl_table=11 CP118132.1 Genbank gene 130879 131970 . - . ID=gene-PUW35_00560;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=PUW35_00560 CP118132.1 Protein Homology CDS 130879 131970 . - 0 ID=cds-WJG93247.1;Parent=gene-PUW35_00560;Dbxref=NCBI_GP:WJG93247.1;Name=WJG93247.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=PUW35_00560;product=3-isopropylmalate dehydrogenase;protein_id=WJG93247.1;transl_table=11 CP118132.1 Genbank gene 131970 133541 . - . ID=gene-PUW35_00565;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=PUW35_00565 CP118132.1 Protein Homology CDS 131970 133541 . - 0 ID=cds-WJG93248.1;Parent=gene-PUW35_00565;Dbxref=NCBI_GP:WJG93248.1;Name=WJG93248.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=PUW35_00565;product=2-isopropylmalate synthase;protein_id=WJG93248.1;transl_table=11 CP118132.1 Genbank gene 133629 133715 . - . ID=gene-PUW35_00570;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=PUW35_00570 CP118132.1 Protein Homology CDS 133629 133715 . - 0 ID=cds-WJG94990.1;Parent=gene-PUW35_00570;Dbxref=NCBI_GP:WJG94990.1;Name=WJG94990.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=PUW35_00570;product=leu operon leader peptide;protein_id=WJG94990.1;transl_table=11 CP118132.1 Genbank gene 134383 135327 . + . ID=gene-PUW35_00575;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=PUW35_00575 CP118132.1 Protein Homology CDS 134383 135327 . + 0 ID=cds-WJG93249.1;Parent=gene-PUW35_00575;Dbxref=NCBI_GP:WJG93249.1;Name=WJG93249.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=PUW35_00575;product=transcriptional regulator LeuO;protein_id=WJG93249.1;transl_table=11 CP118132.1 Genbank gene 135649 137373 . + . ID=gene-PUW35_00580;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=PUW35_00580 CP118132.1 Protein Homology CDS 135649 137373 . + 0 ID=cds-WJG93250.1;Parent=gene-PUW35_00580;Dbxref=NCBI_GP:WJG93250.1;Name=WJG93250.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=PUW35_00580;product=acetolactate synthase 3 large subunit;protein_id=WJG93250.1;transl_table=11 CP118132.1 Genbank gene 137376 137867 . + . ID=gene-PUW35_00585;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PUW35_00585 CP118132.1 Protein Homology CDS 137376 137867 . + 0 ID=cds-WJG94991.1;Parent=gene-PUW35_00585;Dbxref=NCBI_GP:WJG94991.1;Name=WJG94991.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=PUW35_00585;product=acetolactate synthase small subunit;protein_id=WJG94991.1;transl_table=11 CP118132.1 Genbank gene 138150 139154 . + . ID=gene-PUW35_00590;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=PUW35_00590 CP118132.1 Protein Homology CDS 138150 139154 . + 0 ID=cds-WJG93251.1;Parent=gene-PUW35_00590;Dbxref=NCBI_GP:WJG93251.1;Name=WJG93251.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=PUW35_00590;product=catabolite repressor/activator;protein_id=WJG93251.1;transl_table=11 CP118132.1 Genbank gene 139760 140218 . + . ID=gene-PUW35_00595;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=PUW35_00595 CP118132.1 Protein Homology CDS 139760 140218 . + 0 ID=cds-WJG93252.1;Parent=gene-PUW35_00595;Dbxref=NCBI_GP:WJG93252.1;Name=WJG93252.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=PUW35_00595;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WJG93252.1;transl_table=11 CP118132.1 Genbank gene 140220 141161 . + . ID=gene-PUW35_00600;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=PUW35_00600 CP118132.1 Protein Homology CDS 140220 141161 . + 0 ID=cds-WJG93253.1;Parent=gene-PUW35_00600;Dbxref=NCBI_GP:WJG93253.1;Name=WJG93253.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=PUW35_00600;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WJG93253.1;transl_table=11 CP118132.1 Genbank gene 141158 141523 . + . ID=gene-PUW35_00605;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=PUW35_00605 CP118132.1 Protein Homology CDS 141158 141523 . + 0 ID=cds-WJG93254.1;Parent=gene-PUW35_00605;Dbxref=NCBI_GP:WJG93254.1;Name=WJG93254.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=PUW35_00605;product=cell division protein FtsL;protein_id=WJG93254.1;transl_table=11 CP118132.1 Genbank pseudogene 141539 143304 . + . ID=gene-PUW35_00610;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=pseudogene;locus_tag=PUW35_00610;pseudo=true CP118132.1 Protein Homology CDS 141539 143304 . + 0 ID=cds-PUW35_00610;Parent=gene-PUW35_00610;Note=frameshifted;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=PUW35_00610;product=peptidoglycan glycosyltransferase FtsI;pseudo=true;transl_table=11 CP118132.1 Genbank gene 143291 144778 . + . ID=gene-PUW35_00615;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=PUW35_00615 CP118132.1 Protein Homology CDS 143291 144778 . + 0 ID=cds-WJG93255.1;Parent=gene-PUW35_00615;Dbxref=NCBI_GP:WJG93255.1;Name=WJG93255.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=PUW35_00615;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WJG93255.1;transl_table=11 CP118132.1 Genbank gene 144775 146133 . + . ID=gene-PUW35_00620;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=PUW35_00620 CP118132.1 Protein Homology CDS 144775 146133 . + 0 ID=cds-WJG93256.1;Parent=gene-PUW35_00620;Dbxref=NCBI_GP:WJG93256.1;Name=WJG93256.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=PUW35_00620;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WJG93256.1;transl_table=11 CP118132.1 Genbank gene 146127 147209 . + . ID=gene-PUW35_00625;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=PUW35_00625 CP118132.1 Protein Homology CDS 146127 147209 . + 0 ID=cds-WJG93257.1;Parent=gene-PUW35_00625;Dbxref=NCBI_GP:WJG93257.1;Name=WJG93257.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=PUW35_00625;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WJG93257.1;transl_table=11 CP118132.1 Genbank gene 147212 148528 . + . ID=gene-PUW35_00630;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=PUW35_00630 CP118132.1 Protein Homology CDS 147212 148528 . + 0 ID=cds-WJG93258.1;Parent=gene-PUW35_00630;Dbxref=NCBI_GP:WJG93258.1;Name=WJG93258.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=PUW35_00630;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WJG93258.1;transl_table=11 CP118132.1 Genbank pseudogene 148711 149771 . + . ID=gene-PUW35_00635;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=pseudogene;locus_tag=PUW35_00635;pseudo=true CP118132.1 Protein Homology CDS 148711 149771 . + 0 ID=cds-PUW35_00635;Parent=gene-PUW35_00635;Note=frameshifted;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF013279.2;locus_tag=PUW35_00635;product=cell division protein FtsW;pseudo=true;transl_table=11 CP118132.1 Genbank gene 149768 150835 . + . ID=gene-PUW35_00640;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=PUW35_00640 CP118132.1 Protein Homology CDS 149768 150835 . + 0 ID=cds-WJG93259.1;Parent=gene-PUW35_00640;Dbxref=NCBI_GP:WJG93259.1;Name=WJG93259.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=PUW35_00640;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WJG93259.1;transl_table=11 CP118132.1 Genbank gene 150954 152429 . + . ID=gene-PUW35_00645;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=PUW35_00645 CP118132.1 Protein Homology CDS 150954 152429 . + 0 ID=cds-WJG93260.1;Parent=gene-PUW35_00645;Dbxref=NCBI_GP:WJG93260.1;Name=WJG93260.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=PUW35_00645;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WJG93260.1;transl_table=11 CP118132.1 Genbank gene 152422 153342 . + . ID=gene-PUW35_00650;Name=PUW35_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00650 CP118132.1 Protein Homology CDS 152422 153342 . + 0 ID=cds-WJG93261.1;Parent=gene-PUW35_00650;Dbxref=NCBI_GP:WJG93261.1;Name=WJG93261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=PUW35_00650;product=D-alanine--D-alanine ligase;protein_id=WJG93261.1;transl_table=11 CP118132.1 Genbank gene 153344 154174 . + . ID=gene-PUW35_00655;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=PUW35_00655 CP118132.1 Protein Homology CDS 153344 154174 . + 0 ID=cds-WJG93262.1;Parent=gene-PUW35_00655;Dbxref=NCBI_GP:WJG93262.1;Name=WJG93262.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=PUW35_00655;product=cell division protein FtsQ;protein_id=WJG93262.1;transl_table=11 CP118132.1 Genbank gene 154171 155433 . + . ID=gene-PUW35_00660;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=PUW35_00660 CP118132.1 Protein Homology CDS 154171 155433 . + 0 ID=cds-WJG93263.1;Parent=gene-PUW35_00660;Dbxref=NCBI_GP:WJG93263.1;Name=WJG93263.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=PUW35_00660;product=cell division protein FtsA;protein_id=WJG93263.1;transl_table=11 CP118132.1 Genbank pseudogene 155493 156643 . + . ID=gene-PUW35_00665;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=pseudogene;locus_tag=PUW35_00665;pseudo=true CP118132.1 Protein Homology CDS 155493 156643 . + 0 ID=cds-PUW35_00665;Parent=gene-PUW35_00665;Note=frameshifted;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=PUW35_00665;product=cell division protein FtsZ;pseudo=true;transl_table=11 CP118132.1 Genbank gene 156744 157661 . + . ID=gene-PUW35_00670;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=PUW35_00670 CP118132.1 Protein Homology CDS 156744 157661 . + 0 ID=cds-WJG93264.1;Parent=gene-PUW35_00670;Dbxref=NCBI_GP:WJG93264.1;Name=WJG93264.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=PUW35_00670;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WJG93264.1;transl_table=11 CP118132.1 Genbank gene 157940 158437 . + . ID=gene-PUW35_00675;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=PUW35_00675 CP118132.1 Protein Homology CDS 157940 158437 . + 0 ID=cds-WJG93265.1;Parent=gene-PUW35_00675;Dbxref=NCBI_GP:WJG93265.1;Name=WJG93265.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014335.1;locus_tag=PUW35_00675;product=secA translation cis-regulator SecM;protein_id=WJG93265.1;transl_table=11 CP118132.1 Genbank gene 158499 161204 . + . ID=gene-PUW35_00680;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=PUW35_00680 CP118132.1 Protein Homology CDS 158499 161204 . + 0 ID=cds-WJG93266.1;Parent=gene-PUW35_00680;Dbxref=NCBI_GP:WJG93266.1;Name=WJG93266.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=PUW35_00680;product=preprotein translocase subunit SecA;protein_id=WJG93266.1;transl_table=11 CP118132.1 Genbank gene 161356 161751 . + . ID=gene-PUW35_00685;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=PUW35_00685 CP118132.1 Protein Homology CDS 161356 161751 . + 0 ID=cds-WJG93267.1;Parent=gene-PUW35_00685;Dbxref=NCBI_GP:WJG93267.1;Name=WJG93267.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459142.1;locus_tag=PUW35_00685;product=8-oxo-dGTP diphosphatase MutT;protein_id=WJG93267.1;transl_table=11 CP118132.1 Genbank gene 161785 162774 . - . ID=gene-PUW35_00690;Name=PUW35_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00690 CP118132.1 Protein Homology CDS 161785 162774 . - 0 ID=cds-WJG93268.1;Parent=gene-PUW35_00690;Dbxref=NCBI_GP:WJG93268.1;Name=WJG93268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=PUW35_00690;product=aldo/keto reductase;protein_id=WJG93268.1;transl_table=11 CP118132.1 Genbank gene 162860 163801 . + . ID=gene-PUW35_00695;Name=PUW35_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00695 CP118132.1 Protein Homology CDS 162860 163801 . + 0 ID=cds-WJG93269.1;Parent=gene-PUW35_00695;Dbxref=NCBI_GP:WJG93269.1;Name=WJG93269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=PUW35_00695;product=LysR family transcriptional regulator;protein_id=WJG93269.1;transl_table=11 CP118132.1 Genbank gene 163798 163989 . - . ID=gene-PUW35_00700;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=PUW35_00700 CP118132.1 Protein Homology CDS 163798 163989 . - 0 ID=cds-WJG93270.1;Parent=gene-PUW35_00700;Dbxref=NCBI_GP:WJG93270.1;Name=WJG93270.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=PUW35_00700;product=DNA gyrase inhibitor YacG;protein_id=WJG93270.1;transl_table=11 CP118132.1 Genbank gene 163999 164742 . - . ID=gene-PUW35_00705;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=PUW35_00705 CP118132.1 Protein Homology CDS 163999 164742 . - 0 ID=cds-WJG93271.1;Parent=gene-PUW35_00705;Dbxref=NCBI_GP:WJG93271.1;Name=WJG93271.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=PUW35_00705;product=cell division protein ZapD;protein_id=WJG93271.1;transl_table=11 CP118132.1 Genbank gene 164742 165362 . - . ID=gene-PUW35_00710;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=PUW35_00710 CP118132.1 Protein Homology CDS 164742 165362 . - 0 ID=cds-WJG93272.1;Parent=gene-PUW35_00710;Dbxref=NCBI_GP:WJG93272.1;Name=WJG93272.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=PUW35_00710;product=dephospho-CoA kinase;protein_id=WJG93272.1;transl_table=11 CP118132.1 Genbank gene 165588 166631 . + . ID=gene-PUW35_00715;Name=PUW35_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00715 CP118132.1 Protein Homology CDS 165588 166631 . + 0 ID=cds-WJG93273.1;Parent=gene-PUW35_00715;Dbxref=NCBI_GP:WJG93273.1;Name=WJG93273.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=PUW35_00715;product=GMP reductase;protein_id=WJG93273.1;transl_table=11 CP118132.1 Genbank gene 166662 167864 . - . ID=gene-PUW35_00720;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=PUW35_00720 CP118132.1 Protein Homology CDS 166662 167864 . - 0 ID=cds-WJG93274.1;Parent=gene-PUW35_00720;Dbxref=NCBI_GP:WJG93274.1;Name=WJG93274.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=PUW35_00720;product=protein transport protein HofC;protein_id=WJG93274.1;transl_table=11 CP118132.1 Genbank gene 167893 169239 . - . ID=gene-PUW35_00725;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=PUW35_00725 CP118132.1 Protein Homology CDS 167893 169239 . - 0 ID=cds-WJG93275.1;Parent=gene-PUW35_00725;Dbxref=NCBI_GP:WJG93275.1;Name=WJG93275.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=PUW35_00725;product=type II secretion system protein GspE;protein_id=WJG93275.1;transl_table=11 CP118132.1 Genbank gene 169249 169686 . - . ID=gene-PUW35_00730;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=PUW35_00730 CP118132.1 Protein Homology CDS 169249 169686 . - 0 ID=cds-WJG93276.1;Parent=gene-PUW35_00730;Dbxref=NCBI_GP:WJG93276.1;Name=WJG93276.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=PUW35_00730;product=prepilin peptidase-dependent pilin;protein_id=WJG93276.1;transl_table=11 CP118132.1 Genbank gene 169908 170801 . - . ID=gene-PUW35_00735;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=PUW35_00735 CP118132.1 Protein Homology CDS 169908 170801 . - 0 ID=cds-WJG93277.1;Parent=gene-PUW35_00735;Dbxref=NCBI_GP:WJG93277.1;Name=WJG93277.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=PUW35_00735;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WJG93277.1;transl_table=11 CP118132.1 Genbank gene 170889 171452 . + . ID=gene-PUW35_00740;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=PUW35_00740 CP118132.1 Protein Homology CDS 170889 171452 . + 0 ID=cds-WJG93278.1;Parent=gene-PUW35_00740;Dbxref=NCBI_GP:WJG93278.1;Name=WJG93278.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=PUW35_00740;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WJG93278.1;transl_table=11 CP118132.1 Genbank gene 171449 172303 . + . ID=gene-PUW35_00745;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=PUW35_00745 CP118132.1 Protein Homology CDS 171449 172303 . + 0 ID=cds-WJG93279.1;Parent=gene-PUW35_00745;Dbxref=NCBI_GP:WJG93279.1;Name=WJG93279.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=PUW35_00745;product=beta-lactamase regulator AmpE;protein_id=WJG93279.1;transl_table=11 CP118132.1 Genbank gene 172395 173345 . - . ID=gene-PUW35_00750;Name=PUW35_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00750 CP118132.1 Protein Homology CDS 172395 173345 . - 0 ID=cds-WJG93280.1;Parent=gene-PUW35_00750;Dbxref=NCBI_GP:WJG93280.1;Name=WJG93280.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=PUW35_00750;product=family 43 glycosylhydrolase;protein_id=WJG93280.1;transl_table=11 CP118132.1 Genbank gene 173345 174751 . - . ID=gene-PUW35_00755;Name=PUW35_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00755 CP118132.1 Protein Homology CDS 173345 174751 . - 0 ID=cds-WJG93281.1;Parent=gene-PUW35_00755;Dbxref=NCBI_GP:WJG93281.1;Name=WJG93281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=PUW35_00755;product=MFS transporter;protein_id=WJG93281.1;transl_table=11 CP118132.1 Genbank gene 174915 176288 . - . ID=gene-PUW35_00760;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=PUW35_00760 CP118132.1 Protein Homology CDS 174915 176288 . - 0 ID=cds-WJG94992.1;Parent=gene-PUW35_00760;Dbxref=NCBI_GP:WJG94992.1;Name=WJG94992.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=PUW35_00760;product=aromatic amino acid transporter AroP;protein_id=WJG94992.1;transl_table=11 CP118132.1 Genbank gene 176851 177603 . + . ID=gene-PUW35_00765;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=PUW35_00765 CP118132.1 Protein Homology CDS 176851 177603 . + 0 ID=cds-WJG93282.1;Parent=gene-PUW35_00765;Dbxref=NCBI_GP:WJG93282.1;Name=WJG93282.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331770.1;locus_tag=PUW35_00765;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WJG93282.1;transl_table=11 CP118132.1 Genbank gene 177775 180438 . + . ID=gene-PUW35_00770;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=PUW35_00770 CP118132.1 Protein Homology CDS 177775 180438 . + 0 ID=cds-WJG93283.1;Parent=gene-PUW35_00770;Dbxref=NCBI_GP:WJG93283.1;Name=WJG93283.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=PUW35_00770;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WJG93283.1;transl_table=11 CP118132.1 Genbank gene 180453 182336 . + . ID=gene-PUW35_00775;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=PUW35_00775 CP118132.1 Protein Homology CDS 180453 182336 . + 0 ID=cds-WJG93284.1;Parent=gene-PUW35_00775;Dbxref=NCBI_GP:WJG93284.1;Name=WJG93284.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=PUW35_00775;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WJG93284.1;transl_table=11 CP118132.1 Genbank gene 182538 183962 . + . ID=gene-PUW35_00780;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PUW35_00780 CP118132.1 Protein Homology CDS 182538 183962 . + 0 ID=cds-WJG94993.1;Parent=gene-PUW35_00780;Dbxref=NCBI_GP:WJG94993.1;Name=WJG94993.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=PUW35_00780;product=dihydrolipoyl dehydrogenase;protein_id=WJG94993.1;transl_table=11 CP118132.1 Genbank gene 184251 184535 . + . ID=gene-PUW35_00785;Name=PUW35_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00785 CP118132.1 Protein Homology CDS 184251 184535 . + 0 ID=cds-WJG93285.1;Parent=gene-PUW35_00785;Dbxref=NCBI_GP:WJG93285.1;Name=WJG93285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=PUW35_00785;product=hypothetical protein;protein_id=WJG93285.1;transl_table=11 CP118132.1 Genbank gene 184573 185364 . - . ID=gene-PUW35_00790;Name=PUW35_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00790 CP118132.1 Protein Homology CDS 184573 185364 . - 0 ID=cds-WJG93286.1;Parent=gene-PUW35_00790;Dbxref=NCBI_GP:WJG93286.1;Name=WJG93286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=PUW35_00790;product=DUF2950 family protein;protein_id=WJG93286.1;transl_table=11 CP118132.1 Genbank gene 185377 186999 . - . ID=gene-PUW35_00795;Name=PUW35_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00795 CP118132.1 Protein Homology CDS 185377 186999 . - 0 ID=cds-WJG93287.1;Parent=gene-PUW35_00795;Dbxref=NCBI_GP:WJG93287.1;Name=WJG93287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=PUW35_00795;product=DUF3300 domain-containing protein;protein_id=WJG93287.1;transl_table=11 CP118132.1 Genbank pseudogene 187388 189984 . + . ID=gene-PUW35_00800;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=pseudogene;locus_tag=PUW35_00800;pseudo=true CP118132.1 Protein Homology CDS 187388 189984 . + 0 ID=cds-PUW35_00800;Parent=gene-PUW35_00800;Note=frameshifted;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=PUW35_00800;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 190024 190488 . - . ID=gene-PUW35_00805;Name=PUW35_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00805 CP118132.1 Protein Homology CDS 190024 190488 . - 0 ID=cds-WJG93288.1;Parent=gene-PUW35_00805;Dbxref=NCBI_GP:WJG93288.1;Name=WJG93288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=PUW35_00805;product=hypothetical protein;protein_id=WJG93288.1;transl_table=11 CP118132.1 Genbank gene 190905 191228 . - . ID=gene-PUW35_00810;Name=PUW35_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00810 CP118132.1 Protein Homology CDS 190905 191228 . - 0 ID=cds-WJG93289.1;Parent=gene-PUW35_00810;Dbxref=NCBI_GP:WJG93289.1;Name=WJG93289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=PUW35_00810;product=phosphotyrosine protein phosphatase;protein_id=WJG93289.1;transl_table=11 CP118132.1 Genbank gene 191499 191861 . + . ID=gene-PUW35_00815;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=PUW35_00815 CP118132.1 Protein Homology CDS 191499 191861 . + 0 ID=cds-WJG93290.1;Parent=gene-PUW35_00815;Dbxref=NCBI_GP:WJG93290.1;Name=WJG93290.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=PUW35_00815;product=protein YacL;protein_id=WJG93290.1;transl_table=11 CP118132.1 Genbank gene 192096 193049 . + . ID=gene-PUW35_00820;Name=PUW35_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00820 CP118132.1 Protein Homology CDS 192096 193049 . + 0 ID=cds-WJG93291.1;Parent=gene-PUW35_00820;Dbxref=NCBI_GP:WJG93291.1;Name=WJG93291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=PUW35_00820;product=2-keto-3-deoxygluconate permease 1;protein_id=WJG93291.1;transl_table=11 CP118132.1 Genbank gene 193046 194317 . + . ID=gene-PUW35_00825;Name=PUW35_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00825 CP118132.1 Protein Homology CDS 193046 194317 . + 0 ID=cds-WJG93292.1;Parent=gene-PUW35_00825;Dbxref=NCBI_GP:WJG93292.1;Name=WJG93292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=PUW35_00825;product=D-threonate kinase;protein_id=WJG93292.1;transl_table=11 CP118132.1 Genbank gene 194307 195290 . + . ID=gene-PUW35_00830;Name=PUW35_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00830 CP118132.1 Protein Homology CDS 194307 195290 . + 0 ID=cds-WJG93293.1;Parent=gene-PUW35_00830;Dbxref=NCBI_GP:WJG93293.1;Name=WJG93293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=PUW35_00830;product=D-threonate 4-phosphate dehydrogenase;protein_id=WJG93293.1;transl_table=11 CP118132.1 Genbank gene 195300 196067 . + . ID=gene-PUW35_00835;Name=PUW35_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00835 CP118132.1 Protein Homology CDS 195300 196067 . + 0 ID=cds-WJG93294.1;Parent=gene-PUW35_00835;Dbxref=NCBI_GP:WJG93294.1;Name=WJG93294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=PUW35_00835;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG93294.1;transl_table=11 CP118132.1 Genbank gene 196097 196891 . - . ID=gene-PUW35_00840;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=PUW35_00840 CP118132.1 Protein Homology CDS 196097 196891 . - 0 ID=cds-WJG93295.1;Parent=gene-PUW35_00840;Dbxref=NCBI_GP:WJG93295.1;Name=WJG93295.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=PUW35_00840;product=adenosylmethionine decarboxylase;protein_id=WJG93295.1;transl_table=11 CP118132.1 Genbank gene 196912 197772 . - . ID=gene-PUW35_00845;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=PUW35_00845 CP118132.1 Protein Homology CDS 196912 197772 . - 0 ID=cds-WJG93296.1;Parent=gene-PUW35_00845;Dbxref=NCBI_GP:WJG93296.1;Name=WJG93296.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=PUW35_00845;product=polyamine aminopropyltransferase;protein_id=WJG93296.1;transl_table=11 CP118132.1 Genbank pseudogene 197879 198225 . - . ID=gene-PUW35_00850;Name=PUW35_00850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00850;pseudo=true CP118132.1 Protein Homology CDS 197879 198225 . - 0 ID=cds-PUW35_00850;Parent=gene-PUW35_00850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=PUW35_00850;product=YacC family pilotin-like protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 198427 200036 . + . ID=gene-PUW35_00855;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=pseudogene;locus_tag=PUW35_00855;pseudo=true CP118132.1 Protein Homology CDS 198427 200036 . + 0 ID=cds-PUW35_00855;Parent=gene-PUW35_00855;Note=frameshifted;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=PUW35_00855;product=multicopper oxidase CueO;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 200114 202503 . - . ID=gene-PUW35_00860;Name=PUW35_00860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00860;pseudo=true CP118132.1 Protein Homology CDS 200114 202503 . - 0 ID=cds-PUW35_00860;Parent=gene-PUW35_00860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=PUW35_00860;product=pyrroloquinoline quinone-dependent dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 202709 203245 . + . ID=gene-PUW35_00865;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=PUW35_00865 CP118132.1 Protein Homology CDS 202709 203245 . + 0 ID=cds-WJG93297.1;Parent=gene-PUW35_00865;Dbxref=NCBI_GP:WJG93297.1;Name=WJG93297.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=PUW35_00865;product=hypoxanthine phosphoribosyltransferase;protein_id=WJG93297.1;transl_table=11 CP118132.1 Genbank gene 203303 203965 . - . ID=gene-PUW35_00870;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=PUW35_00870 CP118132.1 Protein Homology CDS 203303 203965 . - 0 ID=cds-WJG93298.1;Parent=gene-PUW35_00870;Dbxref=NCBI_GP:WJG93298.1;Name=WJG93298.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=PUW35_00870;product=carbonate dehydratase;protein_id=WJG93298.1;transl_table=11 CP118132.1 Genbank gene 204074 205000 . + . ID=gene-PUW35_00875;Name=PUW35_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00875 CP118132.1 Protein Homology CDS 204074 205000 . + 0 ID=cds-WJG93299.1;Parent=gene-PUW35_00875;Dbxref=NCBI_GP:WJG93299.1;Name=WJG93299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=PUW35_00875;product=ABC transporter ATP-binding protein;protein_id=WJG93299.1;transl_table=11 CP118132.1 Genbank gene 204997 205767 . + . ID=gene-PUW35_00880;Name=PUW35_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00880 CP118132.1 Protein Homology CDS 204997 205767 . + 0 ID=cds-WJG93300.1;Parent=gene-PUW35_00880;Dbxref=NCBI_GP:WJG93300.1;Name=WJG93300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=PUW35_00880;product=ABC transporter permease;protein_id=WJG93300.1;transl_table=11 CP118132.1 Genbank gene 205887 206966 . - . ID=gene-PUW35_00885;Name=PUW35_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00885 CP118132.1 Protein Homology CDS 205887 206966 . - 0 ID=cds-WJG93301.1;Parent=gene-PUW35_00885;Dbxref=NCBI_GP:WJG93301.1;Name=WJG93301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=PUW35_00885;product=fimbrial protein;protein_id=WJG93301.1;transl_table=11 CP118132.1 Genbank pseudogene 206975 209521 . - . ID=gene-PUW35_00890;Name=PUW35_00890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00890;pseudo=true CP118132.1 Protein Homology CDS 206975 209521 . - 0 ID=cds-PUW35_00890;Parent=gene-PUW35_00890;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=PUW35_00890;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 209548 210231 . - . ID=gene-PUW35_00895;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=PUW35_00895 CP118132.1 Protein Homology CDS 209548 210231 . - 0 ID=cds-WJG93302.1;Parent=gene-PUW35_00895;Dbxref=NCBI_GP:WJG93302.1;Name=WJG93302.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=PUW35_00895;product=fimbrial biogenesis chaperone StiB;protein_id=WJG93302.1;transl_table=11 CP118132.1 Genbank gene 210279 210818 . - . ID=gene-PUW35_00900;Name=PUW35_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00900 CP118132.1 Protein Homology CDS 210279 210818 . - 0 ID=cds-WJG93303.1;Parent=gene-PUW35_00900;Dbxref=NCBI_GP:WJG93303.1;Name=WJG93303.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=PUW35_00900;product=fimbrial protein;protein_id=WJG93303.1;transl_table=11 CP118132.1 Genbank pseudogene 211188 211617 . + . ID=gene-PUW35_00905;Name=PUW35_00905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_00905;pseudo=true CP118132.1 Protein Homology CDS 211188 211617 . + 0 ID=cds-PUW35_00905;Parent=gene-PUW35_00905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=PUW35_00905;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 211679 212908 . + . ID=gene-PUW35_00910;Name=PUW35_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00910 CP118132.1 Protein Homology CDS 211679 212908 . + 0 ID=cds-WJG93304.1;Parent=gene-PUW35_00910;Dbxref=NCBI_GP:WJG93304.1;Name=WJG93304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=PUW35_00910;product=polysaccharide deacetylase family protein;protein_id=WJG93304.1;transl_table=11 CP118132.1 Genbank gene 212915 213295 . - . ID=gene-PUW35_00915;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=PUW35_00915 CP118132.1 Protein Homology CDS 212915 213295 . - 0 ID=cds-WJG93305.1;Parent=gene-PUW35_00915;Dbxref=NCBI_GP:WJG93305.1;Name=WJG93305.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=PUW35_00915;product=aspartate 1-decarboxylase;protein_id=WJG93305.1;transl_table=11 CP118132.1 Genbank pseudogene 213390 214243 . - . ID=gene-PUW35_00920;Name=panC;gbkey=Gene;gene=panC;gene_biotype=pseudogene;locus_tag=PUW35_00920;pseudo=true CP118132.1 Protein Homology CDS 213390 214243 . - 0 ID=cds-PUW35_00920;Parent=gene-PUW35_00920;Note=frameshifted;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=PUW35_00920;product=pantoate--beta-alanine ligase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 214369 215160 . - . ID=gene-PUW35_00925;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=PUW35_00925 CP118132.1 Protein Homology CDS 214369 215160 . - 0 ID=cds-WJG93306.1;Parent=gene-PUW35_00925;Dbxref=NCBI_GP:WJG93306.1;Name=WJG93306.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=PUW35_00925;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WJG93306.1;transl_table=11 CP118132.1 Genbank gene 215281 215760 . - . ID=gene-PUW35_00930;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=PUW35_00930 CP118132.1 Protein Homology CDS 215281 215760 . - 0 ID=cds-WJG93307.1;Parent=gene-PUW35_00930;Dbxref=NCBI_GP:WJG93307.1;Name=WJG93307.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=PUW35_00930;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WJG93307.1;transl_table=11 CP118132.1 Genbank gene 215757 217154 . - . ID=gene-PUW35_00935;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=PUW35_00935 CP118132.1 Protein Homology CDS 215757 217154 . - 0 ID=cds-WJG94994.1;Parent=gene-PUW35_00935;Dbxref=NCBI_GP:WJG94994.1;Name=WJG94994.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=PUW35_00935;product=polynucleotide adenylyltransferase PcnB;protein_id=WJG94994.1;transl_table=11 CP118132.1 Genbank gene 217316 218212 . - . ID=gene-PUW35_00940;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=PUW35_00940 CP118132.1 Protein Homology CDS 217316 218212 . - 0 ID=cds-WJG93308.1;Parent=gene-PUW35_00940;Dbxref=NCBI_GP:WJG93308.1;Name=WJG93308.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=PUW35_00940;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WJG93308.1;transl_table=11 CP118132.1 Genbank gene 218281 218736 . - . ID=gene-PUW35_00945;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=PUW35_00945 CP118132.1 Protein Homology CDS 218281 218736 . - 0 ID=cds-WJG93309.1;Parent=gene-PUW35_00945;Dbxref=NCBI_GP:WJG93309.1;Name=WJG93309.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=PUW35_00945;product=RNA polymerase-binding protein DksA;protein_id=WJG93309.1;transl_table=11 CP118132.1 Genbank gene 218913 219617 . - . ID=gene-PUW35_00950;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=PUW35_00950 CP118132.1 Protein Homology CDS 218913 219617 . - 0 ID=cds-WJG93310.1;Parent=gene-PUW35_00950;Dbxref=NCBI_GP:WJG93310.1;Name=WJG93310.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=PUW35_00950;product=DNA/RNA nuclease SfsA;protein_id=WJG93310.1;transl_table=11 CP118132.1 Genbank gene 219634 220164 . - . ID=gene-PUW35_00955;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=PUW35_00955 CP118132.1 Protein Homology CDS 219634 220164 . - 0 ID=cds-WJG93311.1;Parent=gene-PUW35_00955;Dbxref=NCBI_GP:WJG93311.1;Name=WJG93311.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=PUW35_00955;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WJG93311.1;transl_table=11 CP118132.1 Genbank gene 220237 222666 . + . ID=gene-PUW35_00960;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=PUW35_00960 CP118132.1 Protein Homology CDS 220237 222666 . + 0 ID=cds-WJG94995.1;Parent=gene-PUW35_00960;Dbxref=NCBI_GP:WJG94995.1;Name=WJG94995.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=PUW35_00960;product=ATP-dependent helicase HrpB;protein_id=WJG94995.1;transl_table=11 CP118132.1 Genbank gene 222807 225329 . + . ID=gene-PUW35_00965;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=PUW35_00965 CP118132.1 Protein Homology CDS 222807 225329 . + 0 ID=cds-WJG93312.1;Parent=gene-PUW35_00965;Dbxref=NCBI_GP:WJG93312.1;Name=WJG93312.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=PUW35_00965;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WJG93312.1;transl_table=11 CP118132.1 Genbank gene 225622 227811 . + . ID=gene-PUW35_00970;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=PUW35_00970 CP118132.1 Protein Homology CDS 225622 227811 . + 0 ID=cds-WJG93313.1;Parent=gene-PUW35_00970;Dbxref=NCBI_GP:WJG93313.1;Name=WJG93313.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=PUW35_00970;product=ferrichrome porin FhuA;protein_id=WJG93313.1;transl_table=11 CP118132.1 Genbank gene 227860 228657 . + . ID=gene-PUW35_00975;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=PUW35_00975 CP118132.1 Protein Homology CDS 227860 228657 . + 0 ID=cds-WJG93314.1;Parent=gene-PUW35_00975;Dbxref=NCBI_GP:WJG93314.1;Name=WJG93314.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=PUW35_00975;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WJG93314.1;transl_table=11 CP118132.1 Genbank gene 228657 229547 . + . ID=gene-PUW35_00980;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=PUW35_00980 CP118132.1 Protein Homology CDS 228657 229547 . + 0 ID=cds-WJG93315.1;Parent=gene-PUW35_00980;Dbxref=NCBI_GP:WJG93315.1;Name=WJG93315.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=PUW35_00980;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WJG93315.1;transl_table=11 CP118132.1 Genbank pseudogene 229562 231600 . + . ID=gene-PUW35_00985;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=pseudogene;locus_tag=PUW35_00985;pseudo=true CP118132.1 Protein Homology CDS 229562 231600 . + 0 ID=cds-PUW35_00985;Parent=gene-PUW35_00985;Note=frameshifted;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=PUW35_00985;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 232540 233100 . + . ID=gene-PUW35_00990;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=PUW35_00990 CP118132.1 Protein Homology CDS 232540 233100 . + 0 ID=cds-WJG93316.1;Parent=gene-PUW35_00990;Dbxref=NCBI_GP:WJG93316.1;Name=WJG93316.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=PUW35_00990;product=fimbrial major subunit StfA;protein_id=WJG93316.1;transl_table=11 CP118132.1 Genbank gene 233186 235843 . + . ID=gene-PUW35_00995;Name=PUW35_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_00995 CP118132.1 Protein Homology CDS 233186 235843 . + 0 ID=cds-WJG93317.1;Parent=gene-PUW35_00995;Dbxref=NCBI_GP:WJG93317.1;Name=WJG93317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=PUW35_00995;product=fimbrial biogenesis outer membrane usher protein;protein_id=WJG93317.1;transl_table=11 CP118132.1 Genbank gene 235861 236613 . + . ID=gene-PUW35_01000;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=PUW35_01000 CP118132.1 Protein Homology CDS 235861 236613 . + 0 ID=cds-WJG93318.1;Parent=gene-PUW35_01000;Dbxref=NCBI_GP:WJG93318.1;Name=WJG93318.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=PUW35_01000;product=fimbrial chaperone StfD;protein_id=WJG93318.1;transl_table=11 CP118132.1 Genbank gene 236632 237144 . + . ID=gene-PUW35_01005;Name=PUW35_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01005 CP118132.1 Protein Homology CDS 236632 237144 . + 0 ID=cds-WJG93319.1;Parent=gene-PUW35_01005;Dbxref=NCBI_GP:WJG93319.1;Name=WJG93319.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=PUW35_01005;product=fimbrial protein;protein_id=WJG93319.1;transl_table=11 CP118132.1 Genbank pseudogene 237141 237617 . + . ID=gene-PUW35_01010;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=pseudogene;locus_tag=PUW35_01010;pseudo=true CP118132.1 Protein Homology CDS 237141 237617 . + 0 ID=cds-PUW35_01010;Parent=gene-PUW35_01010;Note=internal stop;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=PUW35_01010;product=fimbrial minor subunit StfF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 237617 238147 . + . ID=gene-PUW35_01015;Name=PUW35_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01015 CP118132.1 Protein Homology CDS 237617 238147 . + 0 ID=cds-WJG93320.1;Parent=gene-PUW35_01015;Dbxref=NCBI_GP:WJG93320.1;Name=WJG93320.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=PUW35_01015;product=fimbrial protein;protein_id=WJG93320.1;transl_table=11 CP118132.1 Genbank pseudogene 238147 238988 . + . ID=gene-PUW35_01020;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=pseudogene;locus_tag=PUW35_01020;pseudo=true CP118132.1 Protein Homology CDS 238147 238988 . + 0 ID=cds-PUW35_01020;Parent=gene-PUW35_01020;Note=frameshifted%3B internal stop;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=PUW35_01020;product=fimbrial adhesin StfH;pseudo=true;transl_table=11 CP118132.1 Genbank gene 239095 240375 . - . ID=gene-PUW35_01025;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=PUW35_01025 CP118132.1 Protein Homology CDS 239095 240375 . - 0 ID=cds-WJG93321.1;Parent=gene-PUW35_01025;Dbxref=NCBI_GP:WJG93321.1;Name=WJG93321.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=PUW35_01025;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WJG93321.1;transl_table=11 CP118132.1 Genbank gene 240545 241966 . + . ID=gene-PUW35_01030;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=PUW35_01030 CP118132.1 Protein Homology CDS 240545 241966 . + 0 ID=cds-WJG93322.1;Parent=gene-PUW35_01030;Dbxref=NCBI_GP:WJG93322.1;Name=WJG93322.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=PUW35_01030;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WJG93322.1;transl_table=11 CP118132.1 Genbank gene 242048 242392 . + . ID=gene-PUW35_01035;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=PUW35_01035 CP118132.1 Protein Homology CDS 242048 242392 . + 0 ID=cds-WJG93323.1;Parent=gene-PUW35_01035;Dbxref=NCBI_GP:WJG93323.1;Name=WJG93323.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=PUW35_01035;product=iron-sulfur cluster insertion protein ErpA;protein_id=WJG93323.1;transl_table=11 CP118132.1 Genbank gene 242493 243116 . - . ID=gene-PUW35_01040;Name=PUW35_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01040 CP118132.1 Protein Homology CDS 242493 243116 . - 0 ID=cds-WJG93324.1;Parent=gene-PUW35_01040;Dbxref=NCBI_GP:WJG93324.1;Name=WJG93324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=PUW35_01040;product=TRIC cation channel family protein;protein_id=WJG93324.1;transl_table=11 CP118132.1 Genbank gene 243153 243953 . - . ID=gene-PUW35_01045;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=PUW35_01045 CP118132.1 Protein Homology CDS 243153 243953 . - 0 ID=cds-WJG93325.1;Parent=gene-PUW35_01045;Dbxref=NCBI_GP:WJG93325.1;Name=WJG93325.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=PUW35_01045;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WJG93325.1;transl_table=11 CP118132.1 Genbank gene 243946 244644 . - . ID=gene-PUW35_01050;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=PUW35_01050 CP118132.1 Protein Homology CDS 243946 244644 . - 0 ID=cds-WJG93326.1;Parent=gene-PUW35_01050;Dbxref=NCBI_GP:WJG93326.1;Name=WJG93326.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=PUW35_01050;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WJG93326.1;transl_table=11 CP118132.1 Genbank gene 244729 246246 . + . ID=gene-PUW35_01055;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=PUW35_01055 CP118132.1 Protein Homology CDS 244729 246246 . + 0 ID=cds-WJG93327.1;Parent=gene-PUW35_01055;Dbxref=NCBI_GP:WJG93327.1;Name=WJG93327.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=PUW35_01055;product=dGTPase;protein_id=WJG93327.1;transl_table=11 CP118132.1 Genbank gene 246376 247803 . + . ID=gene-PUW35_01060;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=PUW35_01060 CP118132.1 Protein Homology CDS 246376 247803 . + 0 ID=cds-WJG93328.1;Parent=gene-PUW35_01060;Dbxref=NCBI_GP:WJG93328.1;Name=WJG93328.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=PUW35_01060;product=serine endoprotease DegP;protein_id=WJG93328.1;transl_table=11 CP118132.1 Genbank gene 247956 249113 . + . ID=gene-PUW35_01065;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=PUW35_01065 CP118132.1 Protein Homology CDS 247956 249113 . + 0 ID=cds-WJG93329.1;Parent=gene-PUW35_01065;Dbxref=NCBI_GP:WJG93329.1;Name=WJG93329.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=PUW35_01065;product=DNA-binding transcriptional regulator CdaR;protein_id=WJG93329.1;transl_table=11 CP118132.1 Genbank gene 249202 249588 . - . ID=gene-PUW35_01070;Name=PUW35_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01070 CP118132.1 Protein Homology CDS 249202 249588 . - 0 ID=cds-WJG93330.1;Parent=gene-PUW35_01070;Dbxref=NCBI_GP:WJG93330.1;Name=WJG93330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=PUW35_01070;product=DUF3461 family protein;protein_id=WJG93330.1;transl_table=11 CP118132.1 Genbank gene 249835 251136 . + . ID=gene-PUW35_01075;Name=PUW35_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01075 CP118132.1 Protein Homology CDS 249835 251136 . + 0 ID=cds-WJG93331.1;Parent=gene-PUW35_01075;Dbxref=NCBI_GP:WJG93331.1;Name=WJG93331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=PUW35_01075;product=MFS transporter;protein_id=WJG93331.1;transl_table=11 CP118132.1 Genbank gene 251173 251997 . - . ID=gene-PUW35_01080;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=PUW35_01080 CP118132.1 Protein Homology CDS 251173 251997 . - 0 ID=cds-WJG93332.1;Parent=gene-PUW35_01080;Dbxref=NCBI_GP:WJG93332.1;Name=WJG93332.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=PUW35_01080;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WJG93332.1;transl_table=11 CP118132.1 Genbank gene 252027 254699 . - . ID=gene-PUW35_01085;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=PUW35_01085 CP118132.1 Protein Homology CDS 252027 254699 . - 0 ID=cds-WJG93333.1;Parent=gene-PUW35_01085;Dbxref=NCBI_GP:WJG93333.1;Name=WJG93333.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=PUW35_01085;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WJG93333.1;transl_table=11 CP118132.1 Genbank gene 254937 255731 . - . ID=gene-PUW35_01090;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=PUW35_01090 CP118132.1 Protein Homology CDS 254937 255731 . - 0 ID=cds-WJG93334.1;Parent=gene-PUW35_01090;Dbxref=NCBI_GP:WJG93334.1;Name=WJG93334.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=PUW35_01090;product=type I methionyl aminopeptidase;protein_id=WJG93334.1;transl_table=11 CP118132.1 Genbank gene 256182 256907 . + . ID=gene-PUW35_01095;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=PUW35_01095 CP118132.1 Protein Homology CDS 256182 256907 . + 0 ID=cds-WJG93335.1;Parent=gene-PUW35_01095;Dbxref=NCBI_GP:WJG93335.1;Name=WJG93335.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=PUW35_01095;product=30S ribosomal protein S2;protein_id=WJG93335.1;transl_table=11 CP118132.1 Genbank gene 257165 258016 . + . ID=gene-PUW35_01100;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=PUW35_01100 CP118132.1 Protein Homology CDS 257165 258016 . + 0 ID=cds-WJG93336.1;Parent=gene-PUW35_01100;Dbxref=NCBI_GP:WJG93336.1;Name=WJG93336.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=PUW35_01100;product=translation elongation factor Ts;protein_id=WJG93336.1;transl_table=11 CP118132.1 Genbank gene 258161 258886 . + . ID=gene-PUW35_01105;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=PUW35_01105 CP118132.1 Protein Homology CDS 258161 258886 . + 0 ID=cds-WJG93337.1;Parent=gene-PUW35_01105;Dbxref=NCBI_GP:WJG93337.1;Name=WJG93337.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=PUW35_01105;product=UMP kinase;protein_id=WJG93337.1;transl_table=11 CP118132.1 Genbank gene 259033 259590 . + . ID=gene-PUW35_01110;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=PUW35_01110 CP118132.1 Protein Homology CDS 259033 259590 . + 0 ID=cds-WJG93338.1;Parent=gene-PUW35_01110;Dbxref=NCBI_GP:WJG93338.1;Name=WJG93338.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=PUW35_01110;product=ribosome recycling factor;protein_id=WJG93338.1;transl_table=11 CP118132.1 Genbank gene 259732 260928 . + . ID=gene-PUW35_01115;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=PUW35_01115 CP118132.1 Protein Homology CDS 259732 260928 . + 0 ID=cds-WJG93339.1;Parent=gene-PUW35_01115;Dbxref=NCBI_GP:WJG93339.1;Name=WJG93339.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=PUW35_01115;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WJG93339.1;transl_table=11 CP118132.1 Genbank gene 261241 261999 . + . ID=gene-PUW35_01120;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=PUW35_01120 CP118132.1 Protein Homology CDS 261241 261999 . + 0 ID=cds-WJG93340.1;Parent=gene-PUW35_01120;Dbxref=NCBI_GP:WJG93340.1;Name=WJG93340.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=PUW35_01120;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WJG93340.1;transl_table=11 CP118132.1 Genbank gene 262012 262869 . + . ID=gene-PUW35_01125;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=PUW35_01125 CP118132.1 Protein Homology CDS 262012 262869 . + 0 ID=cds-WJG93341.1;Parent=gene-PUW35_01125;Dbxref=NCBI_GP:WJG93341.1;Name=WJG93341.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=PUW35_01125;product=phosphatidate cytidylyltransferase;protein_id=WJG93341.1;transl_table=11 CP118132.1 Genbank gene 262881 264233 . + . ID=gene-PUW35_01130;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=PUW35_01130 CP118132.1 Protein Homology CDS 262881 264233 . + 0 ID=cds-WJG93342.1;Parent=gene-PUW35_01130;Dbxref=NCBI_GP:WJG93342.1;Name=WJG93342.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=PUW35_01130;product=sigma E protease regulator RseP;protein_id=WJG93342.1;transl_table=11 CP118132.1 Genbank gene 264265 266697 . + . ID=gene-PUW35_01135;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=PUW35_01135 CP118132.1 Protein Homology CDS 264265 266697 . + 0 ID=cds-WJG93343.1;Parent=gene-PUW35_01135;Dbxref=NCBI_GP:WJG93343.1;Name=WJG93343.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=PUW35_01135;product=outer membrane protein assembly factor BamA;protein_id=WJG93343.1;transl_table=11 CP118132.1 Genbank gene 266820 267305 . + . ID=gene-PUW35_01140;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=PUW35_01140 CP118132.1 Protein Homology CDS 266820 267305 . + 0 ID=cds-WJG93344.1;Parent=gene-PUW35_01140;Dbxref=NCBI_GP:WJG93344.1;Name=WJG93344.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=PUW35_01140;product=molecular chaperone Skp;protein_id=WJG93344.1;transl_table=11 CP118132.1 Genbank gene 267309 268334 . + . ID=gene-PUW35_01145;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=PUW35_01145 CP118132.1 Protein Homology CDS 267309 268334 . + 0 ID=cds-WJG93345.1;Parent=gene-PUW35_01145;Dbxref=NCBI_GP:WJG93345.1;Name=WJG93345.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=PUW35_01145;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WJG93345.1;transl_table=11 CP118132.1 Genbank gene 268440 268895 . + . ID=gene-PUW35_01150;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=PUW35_01150 CP118132.1 Protein Homology CDS 268440 268895 . + 0 ID=cds-WJG93346.1;Parent=gene-PUW35_01150;Dbxref=NCBI_GP:WJG93346.1;Name=WJG93346.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=PUW35_01150;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WJG93346.1;transl_table=11 CP118132.1 Genbank gene 268899 269687 . + . ID=gene-PUW35_01155;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=PUW35_01155 CP118132.1 Protein Homology CDS 268899 269687 . + 0 ID=cds-WJG93347.1;Parent=gene-PUW35_01155;Dbxref=NCBI_GP:WJG93347.1;Name=WJG93347.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=PUW35_01155;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WJG93347.1;transl_table=11 CP118132.1 Genbank gene 269687 270835 . + . ID=gene-PUW35_01160;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=PUW35_01160 CP118132.1 Protein Homology CDS 269687 270835 . + 0 ID=cds-WJG93348.1;Parent=gene-PUW35_01160;Dbxref=NCBI_GP:WJG93348.1;Name=WJG93348.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=PUW35_01160;product=lipid-A-disaccharide synthase;protein_id=WJG93348.1;transl_table=11 CP118132.1 Genbank gene 270832 271428 . + . ID=gene-PUW35_01165;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=PUW35_01165 CP118132.1 Protein Homology CDS 270832 271428 . + 0 ID=cds-WJG93349.1;Parent=gene-PUW35_01165;Dbxref=NCBI_GP:WJG93349.1;Name=WJG93349.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=PUW35_01165;product=ribonuclease HII;protein_id=WJG93349.1;transl_table=11 CP118132.1 Genbank gene 271452 274934 . + . ID=gene-PUW35_01170;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=PUW35_01170 CP118132.1 Protein Homology CDS 271452 274934 . + 0 ID=cds-WJG93350.1;Parent=gene-PUW35_01170;Dbxref=NCBI_GP:WJG93350.1;Name=WJG93350.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=PUW35_01170;product=DNA polymerase III subunit alpha;protein_id=WJG93350.1;transl_table=11 CP118132.1 Genbank gene 274947 275906 . + . ID=gene-PUW35_01175;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=PUW35_01175 CP118132.1 Protein Homology CDS 274947 275906 . + 0 ID=cds-WJG93351.1;Parent=gene-PUW35_01175;Dbxref=NCBI_GP:WJG93351.1;Name=WJG93351.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=PUW35_01175;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WJG93351.1;transl_table=11 CP118132.1 Genbank gene 276135 277850 . + . ID=gene-PUW35_01180;Name=PUW35_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01180 CP118132.1 Protein Homology CDS 276135 277850 . + 0 ID=cds-WJG94996.1;Parent=gene-PUW35_01180;Dbxref=NCBI_GP:WJG94996.1;Name=WJG94996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007718136.1;locus_tag=PUW35_01180;product=PKD domain-containing protein;protein_id=WJG94996.1;transl_table=11 CP118132.1 Genbank gene 277926 280067 . + . ID=gene-PUW35_01185;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=PUW35_01185 CP118132.1 Protein Homology CDS 277926 280067 . + 0 ID=cds-WJG93352.1;Parent=gene-PUW35_01185;Dbxref=NCBI_GP:WJG93352.1;Name=WJG93352.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=PUW35_01185;product=lysine decarboxylase LdcC;protein_id=WJG93352.1;transl_table=11 CP118132.1 Genbank gene 280123 280512 . + . ID=gene-PUW35_01190;Name=PUW35_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01190 CP118132.1 Protein Homology CDS 280123 280512 . + 0 ID=cds-WJG93353.1;Parent=gene-PUW35_01190;Dbxref=NCBI_GP:WJG93353.1;Name=WJG93353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=PUW35_01190;product=VOC family protein;protein_id=WJG93353.1;transl_table=11 CP118132.1 Genbank gene 280575 281867 . + . ID=gene-PUW35_01195;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=PUW35_01195 CP118132.1 Protein Homology CDS 280575 281867 . + 0 ID=cds-WJG93354.1;Parent=gene-PUW35_01195;Dbxref=NCBI_GP:WJG93354.1;Name=WJG93354.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=PUW35_01195;product=tRNA lysidine(34) synthetase TilS;protein_id=WJG93354.1;transl_table=11 CP118132.1 Genbank gene 281951 282211 . - . ID=gene-PUW35_01200;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=PUW35_01200 CP118132.1 Protein Homology CDS 281951 282211 . - 0 ID=cds-WJG93355.1;Parent=gene-PUW35_01200;Dbxref=NCBI_GP:WJG93355.1;Name=WJG93355.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=PUW35_01200;product=Rho-binding antiterminator;protein_id=WJG93355.1;transl_table=11 CP118132.1 Genbank gene 282198 282398 . - . ID=gene-PUW35_01205;Name=PUW35_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01205 CP118132.1 Protein Homology CDS 282198 282398 . - 0 ID=cds-WJG93356.1;Parent=gene-PUW35_01205;Dbxref=NCBI_GP:WJG93356.1;Name=WJG93356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=PUW35_01205;product=YaeP family protein;protein_id=WJG93356.1;transl_table=11 CP118132.1 Genbank gene 282596 283141 . + . ID=gene-PUW35_01210;Name=PUW35_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01210 CP118132.1 Protein Homology CDS 282596 283141 . + 0 ID=cds-WJG93357.1;Parent=gene-PUW35_01210;Dbxref=NCBI_GP:WJG93357.1;Name=WJG93357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=PUW35_01210;product=YaeQ family protein;protein_id=WJG93357.1;transl_table=11 CP118132.1 Genbank gene 283138 283560 . + . ID=gene-PUW35_01215;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=PUW35_01215 CP118132.1 Protein Homology CDS 283138 283560 . + 0 ID=cds-WJG93358.1;Parent=gene-PUW35_01215;Dbxref=NCBI_GP:WJG93358.1;Name=WJG93358.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=PUW35_01215;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WJG93358.1;transl_table=11 CP118132.1 Genbank gene 283592 284293 . + . ID=gene-PUW35_01220;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=PUW35_01220 CP118132.1 Protein Homology CDS 283592 284293 . + 0 ID=cds-WJG93359.1;Parent=gene-PUW35_01220;Dbxref=NCBI_GP:WJG93359.1;Name=WJG93359.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=PUW35_01220;product=envelope stress response activation lipoprotein NlpE;protein_id=WJG93359.1;transl_table=11 CP118132.1 Genbank gene 284367 286085 . - . ID=gene-PUW35_01225;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=PUW35_01225 CP118132.1 Protein Homology CDS 284367 286085 . - 0 ID=cds-WJG93360.1;Parent=gene-PUW35_01225;Dbxref=NCBI_GP:WJG93360.1;Name=WJG93360.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=PUW35_01225;product=proline--tRNA ligase;protein_id=WJG93360.1;transl_table=11 CP118132.1 Genbank gene 286196 286903 . - . ID=gene-PUW35_01230;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=PUW35_01230 CP118132.1 Protein Homology CDS 286196 286903 . - 0 ID=cds-WJG93361.1;Parent=gene-PUW35_01230;Dbxref=NCBI_GP:WJG93361.1;Name=WJG93361.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=PUW35_01230;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WJG93361.1;transl_table=11 CP118132.1 Genbank gene 286900 287304 . - . ID=gene-PUW35_01235;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=PUW35_01235 CP118132.1 Protein Homology CDS 286900 287304 . - 0 ID=cds-WJG93362.1;Parent=gene-PUW35_01235;Dbxref=NCBI_GP:WJG93362.1;Name=WJG93362.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=PUW35_01235;product=Rcs stress response system protein RcsF;protein_id=WJG93362.1;transl_table=11 CP118132.1 Genbank gene 287423 288238 . - . ID=gene-PUW35_01240;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=PUW35_01240 CP118132.1 Protein Homology CDS 287423 288238 . - 0 ID=cds-WJG93363.1;Parent=gene-PUW35_01240;Dbxref=NCBI_GP:WJG93363.1;Name=WJG93363.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=PUW35_01240;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WJG93363.1;transl_table=11 CP118132.1 Genbank gene 288277 288930 . - . ID=gene-PUW35_01245;Name=PUW35_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01245 CP118132.1 Protein Homology CDS 288277 288930 . - 0 ID=cds-WJG93364.1;Parent=gene-PUW35_01245;Dbxref=NCBI_GP:WJG93364.1;Name=WJG93364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=PUW35_01245;product=methionine ABC transporter permease MetI;protein_id=WJG93364.1;transl_table=11 CP118132.1 Genbank gene 288923 289954 . - . ID=gene-PUW35_01250;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=PUW35_01250 CP118132.1 Protein Homology CDS 288923 289954 . - 0 ID=cds-WJG93365.1;Parent=gene-PUW35_01250;Dbxref=NCBI_GP:WJG93365.1;Name=WJG93365.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=PUW35_01250;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WJG93365.1;transl_table=11 CP118132.1 Genbank gene 290144 290710 . + . ID=gene-PUW35_01255;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=PUW35_01255 CP118132.1 Protein Homology CDS 290144 290710 . + 0 ID=cds-WJG93366.1;Parent=gene-PUW35_01255;Dbxref=NCBI_GP:WJG93366.1;Name=WJG93366.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=PUW35_01255;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WJG93366.1;transl_table=11 CP118132.1 Genbank gene 291078 292619 . + . ID=gene-PUW35_01260;Name=PUW35_01260;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_01260 CP118132.1 cmsearch rRNA 291078 292619 . + . ID=rna-PUW35_01260;Parent=gene-PUW35_01260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_01260;product=16S ribosomal RNA CP118132.1 cmsearch exon 291078 292619 . + . ID=exon-PUW35_01260-1;Parent=rna-PUW35_01260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_01260;product=16S ribosomal RNA CP118132.1 Genbank gene 292689 292765 . + . ID=gene-PUW35_01265;Name=PUW35_01265;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_01265 CP118132.1 tRNAscan-SE tRNA 292689 292765 . + . ID=rna-PUW35_01265;Parent=gene-PUW35_01265;anticodon=(pos:292723..292725);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01265;product=tRNA-Ile CP118132.1 tRNAscan-SE exon 292689 292765 . + . ID=exon-PUW35_01265-1;Parent=rna-PUW35_01265;anticodon=(pos:292723..292725);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01265;product=tRNA-Ile CP118132.1 Genbank gene 292877 292952 . + . ID=gene-PUW35_01270;Name=PUW35_01270;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_01270 CP118132.1 tRNAscan-SE tRNA 292877 292952 . + . ID=rna-PUW35_01270;Parent=gene-PUW35_01270;anticodon=(pos:292910..292912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01270;product=tRNA-Ala CP118132.1 tRNAscan-SE exon 292877 292952 . + . ID=exon-PUW35_01270-1;Parent=rna-PUW35_01270;anticodon=(pos:292910..292912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01270;product=tRNA-Ala CP118132.1 Genbank gene 293135 296122 . + . ID=gene-PUW35_01275;Name=PUW35_01275;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_01275 CP118132.1 cmsearch rRNA 293135 296122 . + . ID=rna-PUW35_01275;Parent=gene-PUW35_01275;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_01275;product=23S ribosomal RNA CP118132.1 cmsearch exon 293135 296122 . + . ID=exon-PUW35_01275-1;Parent=rna-PUW35_01275;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_01275;product=23S ribosomal RNA CP118132.1 Genbank gene 296319 296434 . + . ID=gene-PUW35_01280;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW35_01280 CP118132.1 cmsearch rRNA 296319 296434 . + . ID=rna-PUW35_01280;Parent=gene-PUW35_01280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_01280;product=5S ribosomal RNA CP118132.1 cmsearch exon 296319 296434 . + . ID=exon-PUW35_01280-1;Parent=rna-PUW35_01280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_01280;product=5S ribosomal RNA CP118132.1 Genbank gene 296626 296702 . + . ID=gene-PUW35_01285;Name=PUW35_01285;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_01285 CP118132.1 tRNAscan-SE tRNA 296626 296702 . + . ID=rna-PUW35_01285;Parent=gene-PUW35_01285;anticodon=(pos:296660..296662);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01285;product=tRNA-Asp CP118132.1 tRNAscan-SE exon 296626 296702 . + . ID=exon-PUW35_01285-1;Parent=rna-PUW35_01285;anticodon=(pos:296660..296662);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01285;product=tRNA-Asp CP118132.1 Genbank gene 296867 297670 . + . ID=gene-PUW35_01290;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=PUW35_01290 CP118132.1 Protein Homology CDS 296867 297670 . + 0 ID=cds-WJG93367.1;Parent=gene-PUW35_01290;Dbxref=NCBI_GP:WJG93367.1;Name=WJG93367.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=PUW35_01290;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WJG93367.1;transl_table=11 CP118132.1 Genbank gene 297691 298605 . - . ID=gene-PUW35_01295;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=PUW35_01295 CP118132.1 Protein Homology CDS 297691 298605 . - 0 ID=cds-WJG93368.1;Parent=gene-PUW35_01295;Dbxref=NCBI_GP:WJG93368.1;Name=WJG93368.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=PUW35_01295;product=DNA-binding transcriptional regulator YafC;protein_id=WJG93368.1;transl_table=11 CP118132.1 Genbank pseudogene 298710 299884 . + . ID=gene-PUW35_01300;Name=PUW35_01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01300;pseudo=true CP118132.1 Protein Homology CDS 298710 299884 . + 0 ID=cds-PUW35_01300;Parent=gene-PUW35_01300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=PUW35_01300;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 300015 300815 . + . ID=gene-PUW35_01305;Name=PUW35_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01305 CP118132.1 Protein Homology CDS 300015 300815 . + 0 ID=cds-WJG93369.1;Parent=gene-PUW35_01305;Dbxref=NCBI_GP:WJG93369.1;Name=WJG93369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=PUW35_01305;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WJG93369.1;transl_table=11 CP118132.1 Genbank gene 300893 301663 . + . ID=gene-PUW35_01310;Name=PUW35_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01310 CP118132.1 Protein Homology CDS 300893 301663 . + 0 ID=cds-WJG93370.1;Parent=gene-PUW35_01310;Dbxref=NCBI_GP:WJG93370.1;Name=WJG93370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=PUW35_01310;product=class I SAM-dependent methyltransferase;protein_id=WJG93370.1;transl_table=11 CP118132.1 Genbank gene 301719 303086 . - . ID=gene-PUW35_01315;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=PUW35_01315 CP118132.1 Protein Homology CDS 301719 303086 . - 0 ID=cds-WJG93371.1;Parent=gene-PUW35_01315;Dbxref=NCBI_GP:WJG93371.1;Name=WJG93371.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=PUW35_01315;product=murein transglycosylase D;protein_id=WJG93371.1;transl_table=11 CP118132.1 Genbank gene 303158 303913 . - . ID=gene-PUW35_01320;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=PUW35_01320 CP118132.1 Protein Homology CDS 303158 303913 . - 0 ID=cds-WJG93372.1;Parent=gene-PUW35_01320;Dbxref=NCBI_GP:WJG93372.1;Name=WJG93372.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=PUW35_01320;product=hydroxyacylglutathione hydrolase;protein_id=WJG93372.1;transl_table=11 CP118132.1 Genbank gene 303948 304670 . + . ID=gene-PUW35_01325;Name=PUW35_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01325 CP118132.1 Protein Homology CDS 303948 304670 . + 0 ID=cds-WJG93373.1;Parent=gene-PUW35_01325;Dbxref=NCBI_GP:WJG93373.1;Name=WJG93373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=PUW35_01325;product=class I SAM-dependent methyltransferase;protein_id=WJG93373.1;transl_table=11 CP118132.1 Genbank gene 304667 305134 . - . ID=gene-PUW35_01330;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=PUW35_01330 CP118132.1 Protein Homology CDS 304667 305134 . - 0 ID=cds-WJG93374.1;Parent=gene-PUW35_01330;Dbxref=NCBI_GP:WJG93374.1;Name=WJG93374.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=PUW35_01330;product=ribonuclease HI;protein_id=WJG93374.1;transl_table=11 CP118132.1 Genbank gene 305198 305929 . + . ID=gene-PUW35_01335;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=PUW35_01335 CP118132.1 Protein Homology CDS 305198 305929 . + 0 ID=cds-WJG93375.1;Parent=gene-PUW35_01335;Dbxref=NCBI_GP:WJG93375.1;Name=WJG93375.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=PUW35_01335;product=DNA polymerase III subunit epsilon;protein_id=WJG93375.1;transl_table=11 CP118132.1 Genbank gene 306063 306139 . + . ID=gene-PUW35_01340;Name=PUW35_01340;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_01340 CP118132.1 tRNAscan-SE tRNA 306063 306139 . + . ID=rna-PUW35_01340;Parent=gene-PUW35_01340;anticodon=(pos:306097..306099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01340;product=tRNA-Asp CP118132.1 tRNAscan-SE exon 306063 306139 . + . ID=exon-PUW35_01340-1;Parent=rna-PUW35_01340;anticodon=(pos:306097..306099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01340;product=tRNA-Asp CP118132.1 Genbank gene 306279 307124 . - . ID=gene-PUW35_01345;Name=PUW35_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01345 CP118132.1 Protein Homology CDS 306279 307124 . - 0 ID=cds-WJG93376.1;Parent=gene-PUW35_01345;Dbxref=NCBI_GP:WJG93376.1;Name=WJG93376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289296.1;locus_tag=PUW35_01345;product=DUF4942 domain-containing protein;protein_id=WJG93376.1;transl_table=11 CP118132.1 Genbank gene 307202 307396 . - . ID=gene-PUW35_01350;Name=PUW35_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01350 CP118132.1 Protein Homology CDS 307202 307396 . - 0 ID=cds-WJG93377.1;Parent=gene-PUW35_01350;Dbxref=NCBI_GP:WJG93377.1;Name=WJG93377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750277.1;locus_tag=PUW35_01350;product=DUF957 domain-containing protein;protein_id=WJG93377.1;transl_table=11 CP118132.1 Genbank gene 307422 307913 . - . ID=gene-PUW35_01355;Name=PUW35_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01355 CP118132.1 Protein Homology CDS 307422 307913 . - 0 ID=cds-WJG93378.1;Parent=gene-PUW35_01355;Dbxref=NCBI_GP:WJG93378.1;Name=WJG93378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392970.1;locus_tag=PUW35_01355;product=DUF5983 family protein;protein_id=WJG93378.1;transl_table=11 CP118132.1 Genbank gene 307861 308286 . - . ID=gene-PUW35_01360;Name=PUW35_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01360 CP118132.1 Protein Homology CDS 307861 308286 . - 0 ID=cds-WJG93379.1;Parent=gene-PUW35_01360;Dbxref=NCBI_GP:WJG93379.1;Name=WJG93379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166552.1;locus_tag=PUW35_01360;product=TA system toxin CbtA family protein;protein_id=WJG93379.1;transl_table=11 CP118132.1 Genbank gene 308345 308989 . - . ID=gene-PUW35_01365;Name=PUW35_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01365 CP118132.1 Protein Homology CDS 308345 308989 . - 0 ID=cds-WJG93380.1;Parent=gene-PUW35_01365;Dbxref=NCBI_GP:WJG93380.1;Name=WJG93380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086751.1;locus_tag=PUW35_01365;product=antitoxin of toxin-antitoxin stability system;protein_id=WJG93380.1;transl_table=11 CP118132.1 Genbank gene 308986 309357 . - . ID=gene-PUW35_01370;Name=PUW35_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01370 CP118132.1 Protein Homology CDS 308986 309357 . - 0 ID=cds-WJG93381.1;Parent=gene-PUW35_01370;Dbxref=NCBI_GP:WJG93381.1;Name=WJG93381.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158818.1;locus_tag=PUW35_01370;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WJG93381.1;transl_table=11 CP118132.1 Genbank gene 309329 309697 . - . ID=gene-PUW35_01375;Name=PUW35_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01375 CP118132.1 Protein Homology CDS 309329 309697 . - 0 ID=cds-WJG93382.1;Parent=gene-PUW35_01375;Dbxref=NCBI_GP:WJG93382.1;Name=WJG93382.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282843.1;locus_tag=PUW35_01375;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WJG93382.1;transl_table=11 CP118132.1 Genbank gene 309715 309936 . - . ID=gene-PUW35_01380;Name=PUW35_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01380 CP118132.1 Protein Homology CDS 309715 309936 . - 0 ID=cds-WJG93383.1;Parent=gene-PUW35_01380;Dbxref=NCBI_GP:WJG93383.1;Name=WJG93383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588435.1;locus_tag=PUW35_01380;product=DUF987 family protein;protein_id=WJG93383.1;transl_table=11 CP118132.1 Genbank gene 309933 310223 . - . ID=gene-PUW35_01385;Name=PUW35_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01385 CP118132.1 Protein Homology CDS 309933 310223 . - 0 ID=cds-WJG93384.1;Parent=gene-PUW35_01385;Dbxref=NCBI_GP:WJG93384.1;Name=WJG93384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001243218.1;locus_tag=PUW35_01385;product=hypothetical protein;protein_id=WJG93384.1;transl_table=11 CP118132.1 Genbank gene 310239 310718 . - . ID=gene-PUW35_01390;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PUW35_01390 CP118132.1 Protein Homology CDS 310239 310718 . - 0 ID=cds-WJG93385.1;Parent=gene-PUW35_01390;Dbxref=NCBI_GP:WJG93385.1;Name=WJG93385.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004109365.1;locus_tag=PUW35_01390;product=DNA repair protein RadC;protein_id=WJG93385.1;transl_table=11 CP118132.1 Genbank gene 310729 311187 . - . ID=gene-PUW35_01395;Name=PUW35_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01395 CP118132.1 Protein Homology CDS 310729 311187 . - 0 ID=cds-WJG93386.1;Parent=gene-PUW35_01395;Dbxref=NCBI_GP:WJG93386.1;Name=WJG93386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783821.1;locus_tag=PUW35_01395;product=antirestriction protein;protein_id=WJG93386.1;transl_table=11 CP118132.1 Genbank gene 311269 311652 . - . ID=gene-PUW35_01400;Name=PUW35_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01400 CP118132.1 Protein Homology CDS 311269 311652 . - 0 ID=cds-WJG93387.1;Parent=gene-PUW35_01400;Dbxref=NCBI_GP:WJG93387.1;Name=WJG93387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522007.1;locus_tag=PUW35_01400;product=hypothetical protein;protein_id=WJG93387.1;transl_table=11 CP118132.1 Genbank gene 312058 312876 . - . ID=gene-PUW35_01405;Name=PUW35_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01405 CP118132.1 Protein Homology CDS 312058 312876 . - 0 ID=cds-WJG93388.1;Parent=gene-PUW35_01405;Dbxref=NCBI_GP:WJG93388.1;Name=WJG93388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234406.1;locus_tag=PUW35_01405;product=DUF932 domain-containing protein;protein_id=WJG93388.1;transl_table=11 CP118132.1 Genbank gene 312982 313221 . - . ID=gene-PUW35_01410;Name=PUW35_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01410 CP118132.1 Protein Homology CDS 312982 313221 . - 0 ID=cds-WJG94997.1;Parent=gene-PUW35_01410;Dbxref=NCBI_GP:WJG94997.1;Name=WJG94997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374428.1;locus_tag=PUW35_01410;product=DUF905 family protein;protein_id=WJG94997.1;transl_table=11 CP118132.1 Genbank gene 313327 313740 . - . ID=gene-PUW35_01415;Name=PUW35_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01415 CP118132.1 Protein Homology CDS 313327 313740 . - 0 ID=cds-WJG93389.1;Parent=gene-PUW35_01415;Dbxref=NCBI_GP:WJG93389.1;Name=WJG93389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789534.1;locus_tag=PUW35_01415;product=hypothetical protein;protein_id=WJG93389.1;transl_table=11 CP118132.1 Genbank gene 314014 314553 . - . ID=gene-PUW35_01420;Name=PUW35_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01420 CP118132.1 Protein Homology CDS 314014 314553 . - 0 ID=cds-WJG93390.1;Parent=gene-PUW35_01420;Dbxref=NCBI_GP:WJG93390.1;Name=WJG93390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104019.1;locus_tag=PUW35_01420;product=DUF4339 domain-containing protein;protein_id=WJG93390.1;transl_table=11 CP118132.1 Genbank gene 314616 315068 . - . ID=gene-PUW35_01425;Name=PUW35_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01425 CP118132.1 Protein Homology CDS 314616 315068 . - 0 ID=cds-WJG93391.1;Parent=gene-PUW35_01425;Dbxref=NCBI_GP:WJG93391.1;Name=WJG93391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245672.1;locus_tag=PUW35_01425;product=hypothetical protein;protein_id=WJG93391.1;transl_table=11 CP118132.1 Genbank gene 315065 315517 . - . ID=gene-PUW35_01430;Name=PUW35_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01430 CP118132.1 Protein Homology CDS 315065 315517 . - 0 ID=cds-WJG93392.1;Parent=gene-PUW35_01430;Dbxref=NCBI_GP:WJG93392.1;Name=WJG93392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683446.1;locus_tag=PUW35_01430;product=hypothetical protein;protein_id=WJG93392.1;transl_table=11 CP118132.1 Genbank gene 315554 316120 . - . ID=gene-PUW35_01435;Name=PUW35_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01435 CP118132.1 Protein Homology CDS 315554 316120 . - 0 ID=cds-WJG93393.1;Parent=gene-PUW35_01435;Dbxref=NCBI_GP:WJG93393.1;Name=WJG93393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765651.1;locus_tag=PUW35_01435;product=hypothetical protein;protein_id=WJG93393.1;transl_table=11 CP118132.1 Genbank gene 316117 316830 . - . ID=gene-PUW35_01440;Name=PUW35_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01440 CP118132.1 Protein Homology CDS 316117 316830 . - 0 ID=cds-WJG93394.1;Parent=gene-PUW35_01440;Dbxref=NCBI_GP:WJG93394.1;Name=WJG93394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075759.1;locus_tag=PUW35_01440;product=WYL domain-containing protein;protein_id=WJG93394.1;transl_table=11 CP118132.1 Genbank pseudogene 317091 317966 . - . ID=gene-PUW35_01445;Name=PUW35_01445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01445;pseudo=true CP118132.1 Protein Homology CDS 317091 317966 . - 0 ID=cds-PUW35_01445;Parent=gene-PUW35_01445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165430.1;locus_tag=PUW35_01445;product=GTPase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 318504 318740 . + . ID=gene-PUW35_01450;Name=PUW35_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01450 CP118132.1 GeneMarkS-2+ CDS 318504 318740 . + 0 ID=cds-WJG93395.1;Parent=gene-PUW35_01450;Dbxref=NCBI_GP:WJG93395.1;Name=WJG93395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_01450;product=hypothetical protein;protein_id=WJG93395.1;transl_table=11 CP118132.1 Genbank gene 319313 320914 . + . ID=gene-PUW35_01455;Name=PUW35_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01455 CP118132.1 GeneMarkS-2+ CDS 319313 320914 . + 0 ID=cds-WJG95183.1;Parent=gene-PUW35_01455;Dbxref=NCBI_GP:WJG95183.1;Name=WJG95183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_01455;product=hypothetical protein;protein_id=WJG95183.1;transl_table=11 CP118132.1 Genbank gene 320902 321720 . + . ID=gene-PUW35_01460;Name=PUW35_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01460 CP118132.1 GeneMarkS-2+ CDS 320902 321720 . + 0 ID=cds-WJG93396.1;Parent=gene-PUW35_01460;Dbxref=NCBI_GP:WJG93396.1;Name=WJG93396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_01460;product=hypothetical protein;protein_id=WJG93396.1;transl_table=11 CP118132.1 Genbank gene 321828 322262 . + . ID=gene-PUW35_01465;Name=PUW35_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01465 CP118132.1 GeneMarkS-2+ CDS 321828 322262 . + 0 ID=cds-WJG93397.1;Parent=gene-PUW35_01465;Dbxref=NCBI_GP:WJG93397.1;Name=WJG93397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_01465;product=hypothetical protein;protein_id=WJG93397.1;transl_table=11 CP118132.1 Genbank pseudogene 322296 322601 . + . ID=gene-PUW35_01470;Name=PUW35_01470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01470;pseudo=true CP118132.1 Protein Homology CDS 322296 322601 . + 0 ID=cds-PUW35_01470;Parent=gene-PUW35_01470;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024486.2;locus_tag=PUW35_01470;product=AAA domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 322598 323158 . + . ID=gene-PUW35_01475;Name=PUW35_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01475 CP118132.1 Protein Homology CDS 322598 323158 . + 0 ID=cds-WJG93398.1;Parent=gene-PUW35_01475;Dbxref=NCBI_GP:WJG93398.1;Name=WJG93398.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024486.2;locus_tag=PUW35_01475;product=AAA domain-containing protein;protein_id=WJG93398.1;transl_table=11 CP118132.1 Genbank gene 323186 323986 . + . ID=gene-PUW35_01480;Name=PUW35_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01480 CP118132.1 Protein Homology CDS 323186 323986 . + 0 ID=cds-WJG93399.1;Parent=gene-PUW35_01480;Dbxref=NCBI_GP:WJG93399.1;Name=WJG93399.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024487.2;locus_tag=PUW35_01480;product=AAA domain-containing protein;protein_id=WJG93399.1;transl_table=11 CP118132.1 Genbank gene 323983 325506 . + . ID=gene-PUW35_01485;Name=PUW35_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01485 CP118132.1 Protein Homology CDS 323983 325506 . + 0 ID=cds-WJG93400.1;Parent=gene-PUW35_01485;Dbxref=NCBI_GP:WJG93400.1;Name=WJG93400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631139.1;locus_tag=PUW35_01485;product=hypothetical protein;protein_id=WJG93400.1;transl_table=11 CP118132.1 Genbank gene 325824 327674 . - . ID=gene-PUW35_01490;Name=PUW35_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01490 CP118132.1 Protein Homology CDS 325824 327674 . - 0 ID=cds-WJG93401.1;Parent=gene-PUW35_01490;Dbxref=NCBI_GP:WJG93401.1;Name=WJG93401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556732.1;locus_tag=PUW35_01490;product=hypothetical protein;protein_id=WJG93401.1;transl_table=11 CP118132.1 Genbank gene 327778 328002 . + . ID=gene-PUW35_01495;Name=PUW35_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01495 CP118132.1 Protein Homology CDS 327778 328002 . + 0 ID=cds-WJG93402.1;Parent=gene-PUW35_01495;Dbxref=NCBI_GP:WJG93402.1;Name=WJG93402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532213.1;locus_tag=PUW35_01495;product=AlpA family phage regulatory protein;protein_id=WJG93402.1;transl_table=11 CP118132.1 Genbank gene 328027 329547 . + . ID=gene-PUW35_01500;Name=PUW35_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01500 CP118132.1 Protein Homology CDS 328027 329547 . + 0 ID=cds-WJG93403.1;Parent=gene-PUW35_01500;Dbxref=NCBI_GP:WJG93403.1;Name=WJG93403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778659.1;locus_tag=PUW35_01500;product=YfjI family protein;protein_id=WJG93403.1;transl_table=11 CP118132.1 Genbank pseudogene 329941 330396 . + . ID=gene-PUW35_01505;Name=PUW35_01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01505;pseudo=true CP118132.1 Protein Homology CDS 329941 330396 . + 0 ID=cds-PUW35_01505;Parent=gene-PUW35_01505;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023154.2;locus_tag=PUW35_01505;product=inovirus Gp2 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 330432 331196 . - . ID=gene-PUW35_01510;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=PUW35_01510 CP118132.1 Protein Homology CDS 330432 331196 . - 0 ID=cds-WJG93404.1;Parent=gene-PUW35_01510;Dbxref=NCBI_GP:WJG93404.1;Name=WJG93404.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806695.1;locus_tag=PUW35_01510;product=type VI secretion system-associated protein TagK;protein_id=WJG93404.1;transl_table=11 CP118132.1 Genbank pseudogene 331563 334362 . + . ID=gene-PUW35_01515;Name=PUW35_01515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01515;pseudo=true CP118132.1 Protein Homology CDS 331563 334362 . + 0 ID=cds-PUW35_01515;Parent=gene-PUW35_01515;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449788.1;locus_tag=PUW35_01515;product=AAA family ATPase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 334328 334693 . + . ID=gene-PUW35_01520;Name=PUW35_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01520 CP118132.1 Protein Homology CDS 334328 334693 . + 0 ID=cds-WJG93405.1;Parent=gene-PUW35_01520;Dbxref=NCBI_GP:WJG93405.1;Name=WJG93405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231281.1;locus_tag=PUW35_01520;product=hypothetical protein;protein_id=WJG93405.1;transl_table=11 CP118132.1 Genbank gene 335471 335791 . + . ID=gene-PUW35_01525;Name=PUW35_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01525 CP118132.1 Protein Homology CDS 335471 335791 . + 0 ID=cds-WJG93406.1;Parent=gene-PUW35_01525;Dbxref=NCBI_GP:WJG93406.1;Name=WJG93406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575643.1;locus_tag=PUW35_01525;product=Imm8 family immunity protein;protein_id=WJG93406.1;transl_table=11 CP118132.1 Genbank gene 335874 336002 . - . ID=gene-PUW35_01530;Name=PUW35_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01530 CP118132.1 Protein Homology CDS 335874 336002 . - 0 ID=cds-WJG93407.1;Parent=gene-PUW35_01530;Dbxref=NCBI_GP:WJG93407.1;Name=WJG93407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675090.1;locus_tag=PUW35_01530;product=hypothetical protein;protein_id=WJG93407.1;transl_table=11 CP118132.1 Genbank gene 336247 336363 . + . ID=gene-PUW35_01535;Name=PUW35_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01535 CP118132.1 Protein Homology CDS 336247 336363 . + 0 ID=cds-WJG93408.1;Parent=gene-PUW35_01535;Dbxref=NCBI_GP:WJG93408.1;Name=WJG93408.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=PUW35_01535;product=hypothetical protein;protein_id=WJG93408.1;transl_table=11 CP118132.1 Genbank gene 336453 336686 . + . ID=gene-PUW35_01540;Name=PUW35_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01540 CP118132.1 GeneMarkS-2+ CDS 336453 336686 . + 0 ID=cds-WJG93409.1;Parent=gene-PUW35_01540;Dbxref=NCBI_GP:WJG93409.1;Name=WJG93409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_01540;product=hypothetical protein;protein_id=WJG93409.1;transl_table=11 CP118132.1 Genbank gene 337557 337955 . + . ID=gene-PUW35_01545;Name=PUW35_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01545 CP118132.1 Protein Homology CDS 337557 337955 . + 0 ID=cds-WJG93410.1;Parent=gene-PUW35_01545;Dbxref=NCBI_GP:WJG93410.1;Name=WJG93410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828181.1;locus_tag=PUW35_01545;product=sugar tyrosine-protein kinase;protein_id=WJG93410.1;transl_table=11 CP118132.1 Genbank gene 338341 338619 . + . ID=gene-PUW35_01550;Name=PUW35_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01550 CP118132.1 Protein Homology CDS 338341 338619 . + 0 ID=cds-WJG94998.1;Parent=gene-PUW35_01550;Dbxref=NCBI_GP:WJG94998.1;Name=WJG94998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=PUW35_01550;product=hypothetical protein;protein_id=WJG94998.1;transl_table=11 CP118132.1 Genbank gene 338751 338999 . - . ID=gene-PUW35_01555;Name=PUW35_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01555 CP118132.1 Protein Homology CDS 338751 338999 . - 0 ID=cds-WJG93411.1;Parent=gene-PUW35_01555;Dbxref=NCBI_GP:WJG93411.1;Name=WJG93411.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446753.1;locus_tag=PUW35_01555;product=SymE family type I addiction module toxin;protein_id=WJG93411.1;transl_table=11 CP118132.1 Genbank pseudogene 339052 339756 . + . ID=gene-PUW35_01560;Name=PUW35_01560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01560;pseudo=true CP118132.1 Protein Homology CDS 339052 339756 . + 0 ID=cds-PUW35_01560;Parent=gene-PUW35_01560;Note=frameshifted;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=PUW35_01560;product=integrase core domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 340378 340875 . + . ID=gene-PUW35_01565;Name=PUW35_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01565 CP118132.1 Protein Homology CDS 340378 340875 . + 0 ID=cds-WJG93412.1;Parent=gene-PUW35_01565;Dbxref=NCBI_GP:WJG93412.1;Name=WJG93412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789627.1;locus_tag=PUW35_01565;product=Saf-pilin pilus formation protein SafA;protein_id=WJG93412.1;transl_table=11 CP118132.1 Genbank gene 340950 341690 . + . ID=gene-PUW35_01570;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=PUW35_01570 CP118132.1 Protein Homology CDS 340950 341690 . + 0 ID=cds-WJG93413.1;Parent=gene-PUW35_01570;Dbxref=NCBI_GP:WJG93413.1;Name=WJG93413.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=PUW35_01570;product=pili assembly chaperone SafB;protein_id=WJG93413.1;transl_table=11 CP118132.1 Genbank pseudogene 341714 344195 . + . ID=gene-PUW35_01575;Name=PUW35_01575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01575;pseudo=true CP118132.1 Protein Homology CDS 341714 344195 . + 0 ID=cds-PUW35_01575;Parent=gene-PUW35_01575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=PUW35_01575;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 344217 344687 . + . ID=gene-PUW35_01580;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=PUW35_01580 CP118132.1 Protein Homology CDS 344217 344687 . + 0 ID=cds-WJG93414.1;Parent=gene-PUW35_01580;Dbxref=NCBI_GP:WJG93414.1;Name=WJG93414.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=PUW35_01580;product=AfaD family invasin;protein_id=WJG93414.1;transl_table=11 CP118132.1 Genbank pseudogene 345095 345915 . + . ID=gene-PUW35_01585;Name=PUW35_01585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01585;pseudo=true CP118132.1 Protein Homology CDS 345095 345915 . + 0 ID=cds-PUW35_01585;Parent=gene-PUW35_01585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=PUW35_01585;product=polysaccharide deacetylase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 345998 346238 . + . ID=gene-PUW35_01590;Name=PUW35_01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01590;pseudo=true CP118132.1 Protein Homology CDS 345998 346238 . + 0 ID=cds-PUW35_01590;Parent=gene-PUW35_01590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=PUW35_01590;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 346732 347673 . + . ID=gene-PUW35_01595;Name=PUW35_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01595 CP118132.1 Protein Homology CDS 346732 347673 . + 0 ID=cds-WJG93415.1;Parent=gene-PUW35_01595;Dbxref=NCBI_GP:WJG93415.1;Name=WJG93415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=PUW35_01595;product=LysR family transcriptional regulator;protein_id=WJG93415.1;transl_table=11 CP118132.1 Genbank gene 347790 348005 . + . ID=gene-PUW35_01600;Name=PUW35_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01600 CP118132.1 Protein Homology CDS 347790 348005 . + 0 ID=cds-WJG93416.1;Parent=gene-PUW35_01600;Dbxref=NCBI_GP:WJG93416.1;Name=WJG93416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=PUW35_01600;product=hypothetical protein;protein_id=WJG93416.1;transl_table=11 CP118132.1 Genbank gene 348009 348728 . - . ID=gene-PUW35_01605;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=PUW35_01605 CP118132.1 Protein Homology CDS 348009 348728 . - 0 ID=cds-WJG93417.1;Parent=gene-PUW35_01605;Dbxref=NCBI_GP:WJG93417.1;Name=WJG93417.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=PUW35_01605;product=adhesin/invasin protein PagN;protein_id=WJG93417.1;transl_table=11 CP118132.1 Genbank gene 349059 349466 . - . ID=gene-PUW35_01610;Name=PUW35_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01610 CP118132.1 Protein Homology CDS 349059 349466 . - 0 ID=cds-WJG93418.1;Parent=gene-PUW35_01610;Dbxref=NCBI_GP:WJG93418.1;Name=WJG93418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=PUW35_01610;product=Spy/CpxP family protein refolding chaperone;protein_id=WJG93418.1;transl_table=11 CP118132.1 Genbank gene 349837 350604 . - . ID=gene-PUW35_01615;Name=PUW35_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01615 CP118132.1 Protein Homology CDS 349837 350604 . - 0 ID=cds-WJG93419.1;Parent=gene-PUW35_01615;Dbxref=NCBI_GP:WJG93419.1;Name=WJG93419.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=PUW35_01615;product=amidohydrolase;protein_id=WJG93419.1;transl_table=11 CP118132.1 Genbank gene 350713 353157 . - . ID=gene-PUW35_01620;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=PUW35_01620 CP118132.1 Protein Homology CDS 350713 353157 . - 0 ID=cds-WJG93420.1;Parent=gene-PUW35_01620;Dbxref=NCBI_GP:WJG93420.1;Name=WJG93420.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=PUW35_01620;product=acyl-CoA dehydrogenase FadE;protein_id=WJG93420.1;transl_table=11 CP118132.1 Genbank gene 353397 353975 . + . ID=gene-PUW35_01625;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=PUW35_01625 CP118132.1 Protein Homology CDS 353397 353975 . + 0 ID=cds-WJG93421.1;Parent=gene-PUW35_01625;Dbxref=NCBI_GP:WJG93421.1;Name=WJG93421.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=PUW35_01625;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WJG93421.1;transl_table=11 CP118132.1 Genbank pseudogene 354188 354954 . + . ID=gene-PUW35_01630;Name=PUW35_01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01630;pseudo=true CP118132.1 Protein Homology CDS 354188 354954 . + 0 ID=cds-PUW35_01630;Parent=gene-PUW35_01630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=PUW35_01630;product=class II glutamine amidotransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 354925 355665 . - . ID=gene-PUW35_01635;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=PUW35_01635 CP118132.1 Protein Homology CDS 354925 355665 . - 0 ID=cds-WJG93422.1;Parent=gene-PUW35_01635;Dbxref=NCBI_GP:WJG93422.1;Name=WJG93422.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=PUW35_01635;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WJG93422.1;transl_table=11 CP118132.1 Genbank gene 355915 356970 . + . ID=gene-PUW35_01640;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=PUW35_01640 CP118132.1 Protein Homology CDS 355915 356970 . + 0 ID=cds-WJG93423.1;Parent=gene-PUW35_01640;Dbxref=NCBI_GP:WJG93423.1;Name=WJG93423.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=PUW35_01640;product=DNA polymerase IV;protein_id=WJG93423.1;transl_table=11 CP118132.1 Genbank gene 357189 358328 . + . ID=gene-PUW35_01645;Name=PUW35_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01645 CP118132.1 Protein Homology CDS 357189 358328 . + 0 ID=cds-WJG93424.1;Parent=gene-PUW35_01645;Dbxref=NCBI_GP:WJG93424.1;Name=WJG93424.1;Ontology_term=GO:0006415,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=PUW35_01645;product=RNA ligase RtcB family protein;protein_id=WJG93424.1;transl_table=11 CP118132.1 Genbank gene 358325 358939 . + . ID=gene-PUW35_01650;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=PUW35_01650 CP118132.1 Protein Homology CDS 358325 358939 . + 0 ID=cds-WJG93425.1;Parent=gene-PUW35_01650;Dbxref=NCBI_GP:WJG93425.1;Name=WJG93425.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=PUW35_01650;product=peptide chain release factor H;protein_id=WJG93425.1;transl_table=11 CP118132.1 Genbank gene 359094 360551 . - . ID=gene-PUW35_01655;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=PUW35_01655 CP118132.1 Protein Homology CDS 359094 360551 . - 0 ID=cds-WJG93426.1;Parent=gene-PUW35_01655;Dbxref=NCBI_GP:WJG93426.1;Name=WJG93426.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=PUW35_01655;product=cytosol nonspecific dipeptidase;protein_id=WJG93426.1;transl_table=11 CP118132.1 Genbank gene 360800 361258 . + . ID=gene-PUW35_01660;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=PUW35_01660 CP118132.1 Protein Homology CDS 360800 361258 . + 0 ID=cds-WJG93427.1;Parent=gene-PUW35_01660;Dbxref=NCBI_GP:WJG93427.1;Name=WJG93427.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=PUW35_01660;product=xanthine phosphoribosyltransferase;protein_id=WJG93427.1;transl_table=11 CP118132.1 Genbank gene 361347 362591 . + . ID=gene-PUW35_01665;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=PUW35_01665 CP118132.1 Protein Homology CDS 361347 362591 . + 0 ID=cds-WJG93428.1;Parent=gene-PUW35_01665;Dbxref=NCBI_GP:WJG93428.1;Name=WJG93428.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=PUW35_01665;product=esterase FrsA;protein_id=WJG93428.1;transl_table=11 CP118132.1 Genbank gene 362649 363050 . + . ID=gene-PUW35_01670;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=PUW35_01670 CP118132.1 Protein Homology CDS 362649 363050 . + 0 ID=cds-WJG93429.1;Parent=gene-PUW35_01670;Dbxref=NCBI_GP:WJG93429.1;Name=WJG93429.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=PUW35_01670;product=sigma factor-binding protein Crl;protein_id=WJG93429.1;transl_table=11 CP118132.1 Genbank pseudogene 363101 364153 . - . ID=gene-PUW35_01675;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=pseudogene;locus_tag=PUW35_01675;pseudo=true CP118132.1 Protein Homology CDS 363101 364153 . - 0 ID=cds-PUW35_01675;Parent=gene-PUW35_01675;Note=internal stop;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=PUW35_01675;product=phosphoporin PhoE;pseudo=true;transl_table=11 CP118132.1 Genbank gene 364436 365539 . + . ID=gene-PUW35_01680;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=PUW35_01680 CP118132.1 Protein Homology CDS 364436 365539 . + 0 ID=cds-WJG93430.1;Parent=gene-PUW35_01680;Dbxref=NCBI_GP:WJG93430.1;Name=WJG93430.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=PUW35_01680;product=glutamate 5-kinase;protein_id=WJG93430.1;transl_table=11 CP118132.1 Genbank gene 365551 366798 . + . ID=gene-PUW35_01685;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=PUW35_01685 CP118132.1 Protein Homology CDS 365551 366798 . + 0 ID=cds-WJG93431.1;Parent=gene-PUW35_01685;Dbxref=NCBI_GP:WJG93431.1;Name=WJG93431.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=PUW35_01685;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WJG93431.1;transl_table=11 CP118132.1 Genbank gene 366914 366989 . + . ID=gene-PUW35_01690;Name=PUW35_01690;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_01690 CP118132.1 tRNAscan-SE tRNA 366914 366989 . + . ID=rna-PUW35_01690;Parent=gene-PUW35_01690;anticodon=(pos:366947..366949);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01690;product=tRNA-Thr CP118132.1 tRNAscan-SE exon 366914 366989 . + . ID=exon-PUW35_01690-1;Parent=rna-PUW35_01690;anticodon=(pos:366947..366949);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_01690;product=tRNA-Thr CP118132.1 Genbank pseudogene 367153 367359 . + . ID=gene-PUW35_01695;Name=PUW35_01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01695;pseudo=true CP118132.1 Protein Homology CDS 367153 367359 . + 0 ID=cds-PUW35_01695;Parent=gene-PUW35_01695;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=PUW35_01695;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 367354 368060 . - . ID=gene-PUW35_01700;Name=PUW35_01700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01700;pseudo=true CP118132.1 Protein Homology CDS 367354 368060 . - 0 ID=cds-PUW35_01700;Parent=gene-PUW35_01700;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW35_01700;product=IS3 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 368127 368471 . + . ID=gene-PUW35_01705;Name=PUW35_01705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01705;pseudo=true CP118132.1 Protein Homology CDS 368127 368471 . + 0 ID=cds-PUW35_01705;Parent=gene-PUW35_01705;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=PUW35_01705;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 368461 368568 . + . ID=gene-PUW35_01710;Name=PUW35_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01710 CP118132.1 Protein Homology CDS 368461 368568 . + 0 ID=cds-WJG94999.1;Parent=gene-PUW35_01710;Dbxref=NCBI_GP:WJG94999.1;Name=WJG94999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.2;locus_tag=PUW35_01710;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=WJG94999.1;transl_table=11 CP118132.1 Genbank gene 368678 369001 . + . ID=gene-PUW35_01715;Name=PUW35_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01715 CP118132.1 Protein Homology CDS 368678 369001 . + 0 ID=cds-WJG93432.1;Parent=gene-PUW35_01715;Dbxref=NCBI_GP:WJG93432.1;Name=WJG93432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=PUW35_01715;product=DUF1889 family protein;protein_id=WJG93432.1;transl_table=11 CP118132.1 Genbank gene 369343 370581 . + . ID=gene-PUW35_01720;Name=PUW35_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01720 CP118132.1 Protein Homology CDS 369343 370581 . + 0 ID=cds-WJG95000.1;Parent=gene-PUW35_01720;Dbxref=NCBI_GP:WJG95000.1;Name=WJG95000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=PUW35_01720;product=MFS transporter;protein_id=WJG95000.1;transl_table=11 CP118132.1 Genbank gene 370712 372133 . + . ID=gene-PUW35_01725;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PUW35_01725 CP118132.1 Protein Homology CDS 370712 372133 . + 0 ID=cds-WJG93433.1;Parent=gene-PUW35_01725;Dbxref=NCBI_GP:WJG93433.1;Name=WJG93433.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=PUW35_01725;product=3-isopropylmalate dehydratase large subunit;protein_id=WJG93433.1;transl_table=11 CP118132.1 Genbank gene 372135 372761 . + . ID=gene-PUW35_01730;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PUW35_01730 CP118132.1 Protein Homology CDS 372135 372761 . + 0 ID=cds-WJG93434.1;Parent=gene-PUW35_01730;Dbxref=NCBI_GP:WJG93434.1;Name=WJG93434.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=PUW35_01730;product=3-isopropylmalate dehydratase small subunit;protein_id=WJG93434.1;transl_table=11 CP118132.1 Genbank gene 372776 373654 . + . ID=gene-PUW35_01735;Name=PUW35_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01735 CP118132.1 Protein Homology CDS 372776 373654 . + 0 ID=cds-WJG93435.1;Parent=gene-PUW35_01735;Dbxref=NCBI_GP:WJG93435.1;Name=WJG93435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=PUW35_01735;product=fumarylacetoacetate hydrolase family protein;protein_id=WJG93435.1;transl_table=11 CP118132.1 Genbank gene 373654 374568 . + . ID=gene-PUW35_01740;Name=PUW35_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01740 CP118132.1 Protein Homology CDS 373654 374568 . + 0 ID=cds-WJG93436.1;Parent=gene-PUW35_01740;Dbxref=NCBI_GP:WJG93436.1;Name=WJG93436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=PUW35_01740;product=alpha/beta hydrolase;protein_id=WJG93436.1;transl_table=11 CP118132.1 Genbank gene 374602 375567 . + . ID=gene-PUW35_01745;Name=PUW35_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01745 CP118132.1 Protein Homology CDS 374602 375567 . + 0 ID=cds-WJG93437.1;Parent=gene-PUW35_01745;Dbxref=NCBI_GP:WJG93437.1;Name=WJG93437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=PUW35_01745;product=LysR family transcriptional regulator;protein_id=WJG93437.1;transl_table=11 CP118132.1 Genbank gene 375512 375784 . - . ID=gene-PUW35_01750;Name=PUW35_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01750 CP118132.1 Protein Homology CDS 375512 375784 . - 0 ID=cds-WJG93438.1;Parent=gene-PUW35_01750;Dbxref=NCBI_GP:WJG93438.1;Name=WJG93438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=PUW35_01750;product=cytoplasmic protein;protein_id=WJG93438.1;transl_table=11 CP118132.1 Genbank gene 376475 376873 . + . ID=gene-PUW35_01755;Name=PUW35_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01755 CP118132.1 Protein Homology CDS 376475 376873 . + 0 ID=cds-WJG93439.1;Parent=gene-PUW35_01755;Dbxref=NCBI_GP:WJG93439.1;Name=WJG93439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=PUW35_01755;product=outer membrane protein;protein_id=WJG93439.1;transl_table=11 CP118132.1 Genbank gene 376920 377678 . - . ID=gene-PUW35_01760;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=PUW35_01760 CP118132.1 Protein Homology CDS 376920 377678 . - 0 ID=cds-WJG93440.1;Parent=gene-PUW35_01760;Dbxref=NCBI_GP:WJG93440.1;Name=WJG93440.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=PUW35_01760;product=fimbrial biogenesis chaperone StbE;protein_id=WJG93440.1;transl_table=11 CP118132.1 Genbank gene 377644 378969 . - . ID=gene-PUW35_01765;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=PUW35_01765 CP118132.1 Protein Homology CDS 377644 378969 . - 0 ID=cds-WJG93441.1;Parent=gene-PUW35_01765;Dbxref=NCBI_GP:WJG93441.1;Name=WJG93441.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=PUW35_01765;product=fimbrial usher protein StbD;protein_id=WJG93441.1;transl_table=11 CP118132.1 Genbank pseudogene 378974 381535 . - . ID=gene-PUW35_01770;Name=PUW35_01770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01770;pseudo=true CP118132.1 Protein Homology CDS 378974 381535 . - 0 ID=cds-PUW35_01770;Parent=gene-PUW35_01770;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=PUW35_01770;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 381519 382280 . - . ID=gene-PUW35_01775;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=PUW35_01775 CP118132.1 Protein Homology CDS 381519 382280 . - 0 ID=cds-WJG93442.1;Parent=gene-PUW35_01775;Dbxref=NCBI_GP:WJG93442.1;Name=WJG93442.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=PUW35_01775;product=fimbrial biogenesis chaperone StbB;protein_id=WJG93442.1;transl_table=11 CP118132.1 Genbank gene 382342 382878 . - . ID=gene-PUW35_01780;Name=PUW35_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01780 CP118132.1 Protein Homology CDS 382342 382878 . - 0 ID=cds-WJG93443.1;Parent=gene-PUW35_01780;Dbxref=NCBI_GP:WJG93443.1;Name=WJG93443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=PUW35_01780;product=fimbrial protein;protein_id=WJG93443.1;transl_table=11 CP118132.1 Genbank gene 383541 383876 . + . ID=gene-PUW35_01785;Name=PUW35_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01785 CP118132.1 GeneMarkS-2+ CDS 383541 383876 . + 0 ID=cds-WJG93444.1;Parent=gene-PUW35_01785;Dbxref=NCBI_GP:WJG93444.1;Name=WJG93444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_01785;product=hypothetical protein;protein_id=WJG93444.1;transl_table=11 CP118132.1 Genbank gene 383879 384274 . + . ID=gene-PUW35_01790;Name=PUW35_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01790 CP118132.1 GeneMarkS-2+ CDS 383879 384274 . + 0 ID=cds-WJG93445.1;Parent=gene-PUW35_01790;Dbxref=NCBI_GP:WJG93445.1;Name=WJG93445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_01790;product=hypothetical protein;protein_id=WJG93445.1;transl_table=11 CP118132.1 Genbank gene 384247 384546 . + . ID=gene-PUW35_01795;Name=PUW35_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01795 CP118132.1 Protein Homology CDS 384247 384546 . + 0 ID=cds-WJG93446.1;Parent=gene-PUW35_01795;Dbxref=NCBI_GP:WJG93446.1;Name=WJG93446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=PUW35_01795;product=hypothetical protein;protein_id=WJG93446.1;transl_table=11 CP118132.1 Genbank gene 385048 386622 . + . ID=gene-PUW35_01800;Name=PUW35_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01800 CP118132.1 Protein Homology CDS 385048 386622 . + 0 ID=cds-WJG93447.1;Parent=gene-PUW35_01800;Dbxref=NCBI_GP:WJG93447.1;Name=WJG93447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=PUW35_01800;product=cyclic diguanylate phosphodiesterase;protein_id=WJG93447.1;transl_table=11 CP118132.1 Genbank pseudogene 386722 387464 . + . ID=gene-PUW35_01805;Name=PUW35_01805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01805;pseudo=true CP118132.1 Protein Homology CDS 386722 387464 . + 0 ID=cds-PUW35_01805;Parent=gene-PUW35_01805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=PUW35_01805;product=response regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 387437 387925 . + . ID=gene-PUW35_01810;Name=PUW35_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01810 CP118132.1 Protein Homology CDS 387437 387925 . + 0 ID=cds-WJG93448.1;Parent=gene-PUW35_01810;Dbxref=NCBI_GP:WJG93448.1;Name=WJG93448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=PUW35_01810;product=hypothetical protein;protein_id=WJG93448.1;transl_table=11 CP118132.1 Genbank gene 388325 388849 . + . ID=gene-PUW35_01815;Name=PUW35_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01815 CP118132.1 Protein Homology CDS 388325 388849 . + 0 ID=cds-WJG93449.1;Parent=gene-PUW35_01815;Dbxref=NCBI_GP:WJG93449.1;Name=WJG93449.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=PUW35_01815;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WJG93449.1;transl_table=11 CP118132.1 Genbank pseudogene 388993 389632 . + . ID=gene-PUW35_01820;Name=PUW35_01820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01820;pseudo=true CP118132.1 Protein Homology CDS 388993 389632 . + 0 ID=cds-PUW35_01820;Parent=gene-PUW35_01820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=PUW35_01820;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 389643 389867 . + . ID=gene-PUW35_01825;Name=PUW35_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01825 CP118132.1 Protein Homology CDS 389643 389867 . + 0 ID=cds-WJG93450.1;Parent=gene-PUW35_01825;Dbxref=NCBI_GP:WJG93450.1;Name=WJG93450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=PUW35_01825;product=hypothetical protein;protein_id=WJG93450.1;transl_table=11 CP118132.1 Genbank gene 389925 390284 . + . ID=gene-PUW35_01830;Name=PUW35_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01830 CP118132.1 Protein Homology CDS 389925 390284 . + 0 ID=cds-WJG93451.1;Parent=gene-PUW35_01830;Dbxref=NCBI_GP:WJG93451.1;Name=WJG93451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=PUW35_01830;product=DUF4156 domain-containing protein;protein_id=WJG93451.1;transl_table=11 CP118132.1 Genbank pseudogene 390354 391810 . - . ID=gene-PUW35_01835;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=pseudogene;locus_tag=PUW35_01835;pseudo=true CP118132.1 Protein Homology CDS 390354 391810 . - 0 ID=cds-PUW35_01835;Parent=gene-PUW35_01835;Note=frameshifted;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=PUW35_01835;product=multidrug efflux transporter outer membrane subunit MdsC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 391827 394994 . - . ID=gene-PUW35_01840;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=PUW35_01840 CP118132.1 Protein Homology CDS 391827 394994 . - 0 ID=cds-WJG93452.1;Parent=gene-PUW35_01840;Dbxref=NCBI_GP:WJG93452.1;Name=WJG93452.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=PUW35_01840;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WJG93452.1;transl_table=11 CP118132.1 Genbank gene 394991 396217 . - . ID=gene-PUW35_01845;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=PUW35_01845 CP118132.1 Protein Homology CDS 394991 396217 . - 0 ID=cds-WJG93453.1;Parent=gene-PUW35_01845;Dbxref=NCBI_GP:WJG93453.1;Name=WJG93453.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=PUW35_01845;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WJG93453.1;transl_table=11 CP118132.1 Genbank pseudogene 396494 398796 . + . ID=gene-PUW35_01850;Name=golT;gbkey=Gene;gene=golT;gene_biotype=pseudogene;locus_tag=PUW35_01850;pseudo=true CP118132.1 Protein Homology CDS 396494 398796 . + 0 ID=cds-PUW35_01850;Parent=gene-PUW35_01850;Note=frameshifted;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083300.1;locus_tag=PUW35_01850;product=gold/copper-translocating P-type ATPase GolT;pseudo=true;transl_table=11 CP118132.1 Genbank gene 398793 399257 . + . ID=gene-PUW35_01855;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=PUW35_01855 CP118132.1 Protein Homology CDS 398793 399257 . + 0 ID=cds-WJG93454.1;Parent=gene-PUW35_01855;Dbxref=NCBI_GP:WJG93454.1;Name=WJG93454.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=PUW35_01855;product=Au(I) sensor transcriptional regulator GolS;protein_id=WJG93454.1;transl_table=11 CP118132.1 Genbank gene 399335 399529 . + . ID=gene-PUW35_01860;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=PUW35_01860 CP118132.1 Protein Homology CDS 399335 399529 . + 0 ID=cds-WJG93455.1;Parent=gene-PUW35_01860;Dbxref=NCBI_GP:WJG93455.1;Name=WJG93455.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=PUW35_01860;product=gold resistance metallochaperone GolB;protein_id=WJG93455.1;transl_table=11 CP118132.1 Genbank gene 399821 401074 . + . ID=gene-PUW35_01865;Name=PUW35_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01865 CP118132.1 Protein Homology CDS 399821 401074 . + 0 ID=cds-WJG93456.1;Parent=gene-PUW35_01865;Dbxref=NCBI_GP:WJG93456.1;Name=WJG93456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=PUW35_01865;product=MFS transporter;protein_id=WJG93456.1;transl_table=11 CP118132.1 Genbank pseudogene 401263 403216 . + . ID=gene-PUW35_01870;Name=PUW35_01870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01870;pseudo=true CP118132.1 Protein Homology CDS 401263 403216 . + 0 ID=cds-PUW35_01870;Parent=gene-PUW35_01870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=PUW35_01870;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 403226 406198 . + . ID=gene-PUW35_01875;Name=PUW35_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01875 CP118132.1 Protein Homology CDS 403226 406198 . + 0 ID=cds-WJG95001.1;Parent=gene-PUW35_01875;Dbxref=NCBI_GP:WJG95001.1;Name=WJG95001.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=PUW35_01875;product=type III restriction-modification system endonuclease;protein_id=WJG95001.1;transl_table=11 CP118132.1 Genbank gene 406475 406576 . + . ID=gene-PUW35_01880;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=PUW35_01880 CP118132.1 Protein Homology CDS 406475 406576 . + 0 ID=cds-WJG93457.1;Parent=gene-PUW35_01880;Dbxref=NCBI_GP:WJG93457.1;Name=WJG93457.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=PUW35_01880;product=small effector SsaA;protein_id=WJG93457.1;transl_table=11 CP118132.1 Genbank gene 406693 408096 . + . ID=gene-PUW35_01885;Name=PUW35_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01885 CP118132.1 Protein Homology CDS 406693 408096 . + 0 ID=cds-WJG93458.1;Parent=gene-PUW35_01885;Dbxref=NCBI_GP:WJG93458.1;Name=WJG93458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=PUW35_01885;product=cytochrome ubiquinol oxidase subunit I;protein_id=WJG93458.1;transl_table=11 CP118132.1 Genbank pseudogene 408093 409102 . + . ID=gene-PUW35_01890;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=PUW35_01890;pseudo=true CP118132.1 Protein Homology CDS 408093 409102 . + 0 ID=cds-PUW35_01890;Parent=gene-PUW35_01890;Note=frameshifted;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=PUW35_01890;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 CP118132.1 Genbank gene 409102 409233 . + . ID=gene-PUW35_01895;Name=PUW35_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01895 CP118132.1 Protein Homology CDS 409102 409233 . + 0 ID=cds-WJG93459.1;Parent=gene-PUW35_01895;Dbxref=NCBI_GP:WJG93459.1;Name=WJG93459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241460.1;locus_tag=PUW35_01895;product=DUF2474 domain-containing protein;protein_id=WJG93459.1;transl_table=11 CP118132.1 Genbank pseudogene 409440 410445 . + . ID=gene-PUW35_01900;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=pseudogene;locus_tag=PUW35_01900;pseudo=true CP118132.1 Protein Homology CDS 409440 410445 . + 0 ID=cds-PUW35_01900;Parent=gene-PUW35_01900;Note=frameshifted;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=PUW35_01900;product=ferrioxamine uptake transcriptional regulator FoxR;pseudo=true;transl_table=11 CP118132.1 Genbank gene 410591 412699 . + . ID=gene-PUW35_01905;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=PUW35_01905 CP118132.1 Protein Homology CDS 410591 412699 . + 0 ID=cds-WJG93460.1;Parent=gene-PUW35_01905;Dbxref=NCBI_GP:WJG93460.1;Name=WJG93460.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=PUW35_01905;product=ferrioxamine B receptor FoxA;protein_id=WJG93460.1;transl_table=11 CP118132.1 Genbank pseudogene 412740 413371 . - . ID=gene-PUW35_01910;Name=PUW35_01910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01910;pseudo=true CP118132.1 Protein Homology CDS 412740 413371 . - 0 ID=cds-PUW35_01910;Parent=gene-PUW35_01910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=PUW35_01910;product=LysE family transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 413603 413878 . + . ID=gene-PUW35_01915;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=PUW35_01915 CP118132.1 Protein Homology CDS 413603 413878 . + 0 ID=cds-WJG93461.1;Parent=gene-PUW35_01915;Dbxref=NCBI_GP:WJG93461.1;Name=WJG93461.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=PUW35_01915;product=DUF1471 family periplasmic protein YahO;protein_id=WJG93461.1;transl_table=11 CP118132.1 Genbank gene 414014 415639 . - . ID=gene-PUW35_01920;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=PUW35_01920 CP118132.1 Protein Homology CDS 414014 415639 . - 0 ID=cds-WJG93462.1;Parent=gene-PUW35_01920;Dbxref=NCBI_GP:WJG93462.1;Name=WJG93462.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=PUW35_01920;product=propionate catabolism operon regulatory protein PrpR;protein_id=WJG93462.1;transl_table=11 CP118132.1 Genbank gene 415905 416792 . + . ID=gene-PUW35_01925;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=PUW35_01925 CP118132.1 Protein Homology CDS 415905 416792 . + 0 ID=cds-WJG93463.1;Parent=gene-PUW35_01925;Dbxref=NCBI_GP:WJG93463.1;Name=WJG93463.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=PUW35_01925;product=methylisocitrate lyase;protein_id=WJG93463.1;transl_table=11 CP118132.1 Genbank gene 416915 418084 . + . ID=gene-PUW35_01930;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=PUW35_01930 CP118132.1 Protein Homology CDS 416915 418084 . + 0 ID=cds-WJG93464.1;Parent=gene-PUW35_01930;Dbxref=NCBI_GP:WJG93464.1;Name=WJG93464.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=PUW35_01930;product=2-methylcitrate synthase;protein_id=WJG93464.1;transl_table=11 CP118132.1 Genbank gene 418122 419573 . + . ID=gene-PUW35_01935;Name=PUW35_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01935 CP118132.1 Protein Homology CDS 418122 419573 . + 0 ID=cds-WJG93465.1;Parent=gene-PUW35_01935;Dbxref=NCBI_GP:WJG93465.1;Name=WJG93465.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=PUW35_01935;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WJG93465.1;transl_table=11 CP118132.1 Genbank gene 419614 421500 . + . ID=gene-PUW35_01940;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=PUW35_01940 CP118132.1 Protein Homology CDS 419614 421500 . + 0 ID=cds-WJG93466.1;Parent=gene-PUW35_01940;Dbxref=NCBI_GP:WJG93466.1;Name=WJG93466.1;Ontology_term=GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=PUW35_01940;product=propionate--CoA ligase;protein_id=WJG93466.1;transl_table=11 CP118132.1 Genbank gene 421604 422578 . - . ID=gene-PUW35_01945;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=PUW35_01945 CP118132.1 Protein Homology CDS 421604 422578 . - 0 ID=cds-WJG93467.1;Parent=gene-PUW35_01945;Dbxref=NCBI_GP:WJG93467.1;Name=WJG93467.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=PUW35_01945;product=porphobilinogen synthase;protein_id=WJG93467.1;transl_table=11 CP118132.1 Genbank gene 423092 426106 . + . ID=gene-PUW35_01950;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=PUW35_01950 CP118132.1 Protein Homology CDS 423092 426106 . + 0 ID=cds-WJG93468.1;Parent=gene-PUW35_01950;Dbxref=NCBI_GP:WJG93468.1;Name=WJG93468.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556401.1;locus_tag=PUW35_01950;product=autotransporter adhesin EhaB;protein_id=WJG93468.1;transl_table=11 CP118132.1 Genbank gene 426192 426815 . + . ID=gene-PUW35_01955;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=PUW35_01955 CP118132.1 Protein Homology CDS 426192 426815 . + 0 ID=cds-WJG93469.1;Parent=gene-PUW35_01955;Dbxref=NCBI_GP:WJG93469.1;Name=WJG93469.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=PUW35_01955;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WJG93469.1;transl_table=11 CP118132.1 Genbank gene 426860 428017 . - . ID=gene-PUW35_01960;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=PUW35_01960 CP118132.1 Protein Homology CDS 426860 428017 . - 0 ID=cds-WJG93470.1;Parent=gene-PUW35_01960;Dbxref=NCBI_GP:WJG93470.1;Name=WJG93470.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=PUW35_01960;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WJG93470.1;transl_table=11 CP118132.1 Genbank gene 428364 429584 . + . ID=gene-PUW35_01965;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=PUW35_01965 CP118132.1 Protein Homology CDS 428364 429584 . + 0 ID=cds-WJG95002.1;Parent=gene-PUW35_01965;Dbxref=NCBI_GP:WJG95002.1;Name=WJG95002.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=PUW35_01965;product=peptide antibiotic transporter SbmA;protein_id=WJG95002.1;transl_table=11 CP118132.1 Genbank gene 429599 430693 . + . ID=gene-PUW35_01970;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=PUW35_01970 CP118132.1 Protein Homology CDS 429599 430693 . + 0 ID=cds-WJG93471.1;Parent=gene-PUW35_01970;Dbxref=NCBI_GP:WJG93471.1;Name=WJG93471.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=PUW35_01970;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WJG93471.1;transl_table=11 CP118132.1 Genbank gene 430731 431039 . - . ID=gene-PUW35_01975;Name=PUW35_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01975 CP118132.1 Protein Homology CDS 430731 431039 . - 0 ID=cds-WJG93472.1;Parent=gene-PUW35_01975;Dbxref=NCBI_GP:WJG93472.1;Name=WJG93472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=PUW35_01975;product=YaiY family protein;protein_id=WJG93472.1;transl_table=11 CP118132.1 Genbank gene 431307 431522 . + . ID=gene-PUW35_01980;Name=PUW35_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01980 CP118132.1 Protein Homology CDS 431307 431522 . + 0 ID=cds-WJG93473.1;Parent=gene-PUW35_01980;Dbxref=NCBI_GP:WJG93473.1;Name=WJG93473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=PUW35_01980;product=DUF2754 family protein;protein_id=WJG93473.1;transl_table=11 CP118132.1 Genbank gene 431548 432642 . - . ID=gene-PUW35_01985;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=PUW35_01985 CP118132.1 Protein Homology CDS 431548 432642 . - 0 ID=cds-WJG93474.1;Parent=gene-PUW35_01985;Dbxref=NCBI_GP:WJG93474.1;Name=WJG93474.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=PUW35_01985;product=D-alanine--D-alanine ligase;protein_id=WJG93474.1;transl_table=11 CP118132.1 Genbank gene 432720 433433 . + . ID=gene-PUW35_01990;Name=PUW35_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_01990 CP118132.1 Protein Homology CDS 432720 433433 . + 0 ID=cds-WJG93475.1;Parent=gene-PUW35_01990;Dbxref=NCBI_GP:WJG93475.1;Name=WJG93475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=PUW35_01990;product=extensin family protein;protein_id=WJG93475.1;transl_table=11 CP118132.1 Genbank pseudogene 433602 434813 . + . ID=gene-PUW35_01995;Name=PUW35_01995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_01995;pseudo=true CP118132.1 Protein Homology CDS 433602 434813 . + 0 ID=cds-PUW35_01995;Parent=gene-PUW35_01995;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=PUW35_01995;product=multidrug efflux MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 435110 435370 . + . ID=gene-PUW35_02000;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=PUW35_02000 CP118132.1 Protein Homology CDS 435110 435370 . + 0 ID=cds-WJG93476.1;Parent=gene-PUW35_02000;Dbxref=NCBI_GP:WJG93476.1;Name=WJG93476.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=PUW35_02000;product=anti-adapter protein IraP;protein_id=WJG93476.1;transl_table=11 CP118132.1 Genbank gene 435719 436039 . + . ID=gene-PUW35_02005;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=PUW35_02005 CP118132.1 Protein Homology CDS 435719 436039 . + 0 ID=cds-WJG93477.1;Parent=gene-PUW35_02005;Dbxref=NCBI_GP:WJG93477.1;Name=WJG93477.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=PUW35_02005;product=phosphate starvation-inducible protein PsiF;protein_id=WJG93477.1;transl_table=11 CP118132.1 Genbank gene 436131 437243 . + . ID=gene-PUW35_02010;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=PUW35_02010 CP118132.1 Protein Homology CDS 436131 437243 . + 0 ID=cds-WJG93478.1;Parent=gene-PUW35_02010;Dbxref=NCBI_GP:WJG93478.1;Name=WJG93478.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=PUW35_02010;product=diguanylate cyclase AdrA;protein_id=WJG93478.1;transl_table=11 CP118132.1 Genbank gene 437258 438067 . - . ID=gene-PUW35_02015;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=PUW35_02015 CP118132.1 Protein Homology CDS 437258 438067 . - 0 ID=cds-WJG93479.1;Parent=gene-PUW35_02015;Dbxref=NCBI_GP:WJG93479.1;Name=WJG93479.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=PUW35_02015;product=pyrroline-5-carboxylate reductase;protein_id=WJG93479.1;transl_table=11 CP118132.1 Genbank pseudogene 438207 438362 . + . ID=gene-PUW35_02020;Name=PUW35_02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02020;pseudo=true CP118132.1 Protein Homology CDS 438207 438362 . + 0 ID=cds-PUW35_02020;Parent=gene-PUW35_02020;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=PUW35_02020;product=YaiI/YqxD family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 438589 439134 . + . ID=gene-PUW35_02025;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=PUW35_02025 CP118132.1 Protein Homology CDS 438589 439134 . + 0 ID=cds-WJG93480.1;Parent=gene-PUW35_02025;Dbxref=NCBI_GP:WJG93480.1;Name=WJG93480.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=PUW35_02025;product=shikimate kinase AroL;protein_id=WJG93480.1;transl_table=11 CP118132.1 Genbank gene 439161 439352 . + . ID=gene-PUW35_02030;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=PUW35_02030 CP118132.1 Protein Homology CDS 439161 439352 . + 0 ID=cds-WJG93481.1;Parent=gene-PUW35_02030;Dbxref=NCBI_GP:WJG93481.1;Name=WJG93481.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=PUW35_02030;product=protein YaiA;protein_id=WJG93481.1;transl_table=11 CP118132.1 Genbank gene 439603 440280 . + . ID=gene-PUW35_02035;Name=PUW35_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02035 CP118132.1 Protein Homology CDS 439603 440280 . + 0 ID=cds-WJG95003.1;Parent=gene-PUW35_02035;Dbxref=NCBI_GP:WJG95003.1;Name=WJG95003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=PUW35_02035;product=AroM family protein;protein_id=WJG95003.1;transl_table=11 CP118132.1 Genbank gene 440351 440635 . + . ID=gene-PUW35_02040;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=PUW35_02040 CP118132.1 Protein Homology CDS 440351 440635 . + 0 ID=cds-WJG93482.1;Parent=gene-PUW35_02040;Dbxref=NCBI_GP:WJG93482.1;Name=WJG93482.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=PUW35_02040;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WJG93482.1;transl_table=11 CP118132.1 Genbank gene 440673 441584 . - . ID=gene-PUW35_02045;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=PUW35_02045 CP118132.1 Protein Homology CDS 440673 441584 . - 0 ID=cds-WJG93483.1;Parent=gene-PUW35_02045;Dbxref=NCBI_GP:WJG93483.1;Name=WJG93483.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=PUW35_02045;product=recombination-associated protein RdgC;protein_id=WJG93483.1;transl_table=11 CP118132.1 Genbank gene 441710 442618 . + . ID=gene-PUW35_02050;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=PUW35_02050 CP118132.1 Protein Homology CDS 441710 442618 . + 0 ID=cds-WJG93484.1;Parent=gene-PUW35_02050;Dbxref=NCBI_GP:WJG93484.1;Name=WJG93484.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=PUW35_02050;product=fructokinase;protein_id=WJG93484.1;transl_table=11 CP118132.1 Genbank gene 442640 443812 . - . ID=gene-PUW35_02055;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=PUW35_02055 CP118132.1 Protein Homology CDS 442640 443812 . - 0 ID=cds-WJG93485.1;Parent=gene-PUW35_02055;Dbxref=NCBI_GP:WJG93485.1;Name=WJG93485.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=PUW35_02055;product=MFS transporter AraJ;protein_id=WJG93485.1;transl_table=11 CP118132.1 Genbank pseudogene 443985 447124 . - . ID=gene-PUW35_02060;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=pseudogene;locus_tag=PUW35_02060;pseudo=true CP118132.1 Protein Homology CDS 443985 447124 . - 0 ID=cds-PUW35_02060;Parent=gene-PUW35_02060;Note=frameshifted;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=PUW35_02060;product=exonuclease subunit SbcC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 447121 448323 . - . ID=gene-PUW35_02065;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=PUW35_02065 CP118132.1 Protein Homology CDS 447121 448323 . - 0 ID=cds-WJG93486.1;Parent=gene-PUW35_02065;Dbxref=NCBI_GP:WJG93486.1;Name=WJG93486.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=PUW35_02065;product=exonuclease subunit SbcD;protein_id=WJG93486.1;transl_table=11 CP118132.1 Genbank gene 448538 449227 . + . ID=gene-PUW35_02070;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=PUW35_02070 CP118132.1 Protein Homology CDS 448538 449227 . + 0 ID=cds-WJG93487.1;Parent=gene-PUW35_02070;Dbxref=NCBI_GP:WJG93487.1;Name=WJG93487.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=PUW35_02070;product=phosphate response regulator transcription factor PhoB;protein_id=WJG93487.1;transl_table=11 CP118132.1 Genbank gene 449297 450592 . + . ID=gene-PUW35_02075;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=PUW35_02075 CP118132.1 Protein Homology CDS 449297 450592 . + 0 ID=cds-WJG93488.1;Parent=gene-PUW35_02075;Dbxref=NCBI_GP:WJG93488.1;Name=WJG93488.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=PUW35_02075;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WJG93488.1;transl_table=11 CP118132.1 Genbank gene 451001 452320 . + . ID=gene-PUW35_02080;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PUW35_02080 CP118132.1 Protein Homology CDS 451001 452320 . + 0 ID=cds-WJG93489.1;Parent=gene-PUW35_02080;Dbxref=NCBI_GP:WJG93489.1;Name=WJG93489.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=PUW35_02080;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WJG93489.1;transl_table=11 CP118132.1 Genbank gene 452395 453765 . + . ID=gene-PUW35_02085;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=PUW35_02085 CP118132.1 Protein Homology CDS 452395 453765 . + 0 ID=cds-WJG95004.1;Parent=gene-PUW35_02085;Dbxref=NCBI_GP:WJG95004.1;Name=WJG95004.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=PUW35_02085;product=proline-specific permease ProY;protein_id=WJG95004.1;transl_table=11 CP118132.1 Genbank gene 453927 455744 . + . ID=gene-PUW35_02090;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=PUW35_02090 CP118132.1 Protein Homology CDS 453927 455744 . + 0 ID=cds-WJG93490.1;Parent=gene-PUW35_02090;Dbxref=NCBI_GP:WJG93490.1;Name=WJG93490.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=PUW35_02090;product=maltodextrin glucosidase;protein_id=WJG93490.1;transl_table=11 CP118132.1 Genbank gene 455816 456418 . - . ID=gene-PUW35_02095;Name=PUW35_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02095 CP118132.1 Protein Homology CDS 455816 456418 . - 0 ID=cds-WJG93491.1;Parent=gene-PUW35_02095;Dbxref=NCBI_GP:WJG93491.1;Name=WJG93491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=PUW35_02095;product=peroxiredoxin;protein_id=WJG93491.1;transl_table=11 CP118132.1 Genbank gene 456627 457208 . - . ID=gene-PUW35_02100;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=PUW35_02100 CP118132.1 Protein Homology CDS 456627 457208 . - 0 ID=cds-WJG93492.1;Parent=gene-PUW35_02100;Dbxref=NCBI_GP:WJG93492.1;Name=WJG93492.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=PUW35_02100;product=ACP phosphodiesterase;protein_id=WJG93492.1;transl_table=11 CP118132.1 Genbank gene 457302 458366 . + . ID=gene-PUW35_02105;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=PUW35_02105 CP118132.1 Protein Homology CDS 457302 458366 . + 0 ID=cds-WJG93493.1;Parent=gene-PUW35_02105;Dbxref=NCBI_GP:WJG93493.1;Name=WJG93493.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=PUW35_02105;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WJG93493.1;transl_table=11 CP118132.1 Genbank gene 458563 459690 . + . ID=gene-PUW35_02110;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=PUW35_02110 CP118132.1 Protein Homology CDS 458563 459690 . + 0 ID=cds-WJG93494.1;Parent=gene-PUW35_02110;Dbxref=NCBI_GP:WJG93494.1;Name=WJG93494.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=PUW35_02110;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WJG93494.1;transl_table=11 CP118132.1 Genbank gene 459713 460045 . + . ID=gene-PUW35_02115;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=PUW35_02115 CP118132.1 Protein Homology CDS 459713 460045 . + 0 ID=cds-WJG93495.1;Parent=gene-PUW35_02115;Dbxref=NCBI_GP:WJG93495.1;Name=WJG93495.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=PUW35_02115;product=preprotein translocase subunit YajC;protein_id=WJG93495.1;transl_table=11 CP118132.1 Genbank pseudogene 460073 461918 . + . ID=gene-PUW35_02120;Name=secD;gbkey=Gene;gene=secD;gene_biotype=pseudogene;locus_tag=PUW35_02120;pseudo=true CP118132.1 Protein Homology CDS 460073 461918 . + 0 ID=cds-PUW35_02120;Parent=gene-PUW35_02120;Note=frameshifted;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=PUW35_02120;product=protein translocase subunit SecD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 461929 462900 . + . ID=gene-PUW35_02125;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=PUW35_02125 CP118132.1 Protein Homology CDS 461929 462900 . + 0 ID=cds-WJG93496.1;Parent=gene-PUW35_02125;Dbxref=NCBI_GP:WJG93496.1;Name=WJG93496.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=PUW35_02125;product=protein translocase subunit SecF;protein_id=WJG93496.1;transl_table=11 CP118132.1 Genbank gene 463045 463410 . + . ID=gene-PUW35_02130;Name=PUW35_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02130 CP118132.1 Protein Homology CDS 463045 463410 . + 0 ID=cds-WJG93497.1;Parent=gene-PUW35_02130;Dbxref=NCBI_GP:WJG93497.1;Name=WJG93497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=PUW35_02130;product=VOC family protein;protein_id=WJG93497.1;transl_table=11 CP118132.1 Genbank gene 463436 464128 . + . ID=gene-PUW35_02135;Name=PUW35_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02135 CP118132.1 Protein Homology CDS 463436 464128 . + 0 ID=cds-WJG93498.1;Parent=gene-PUW35_02135;Dbxref=NCBI_GP:WJG93498.1;Name=WJG93498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=PUW35_02135;product=YafY family protein;protein_id=WJG93498.1;transl_table=11 CP118132.1 Genbank gene 464298 464645 . + . ID=gene-PUW35_02140;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=PUW35_02140 CP118132.1 Protein Homology CDS 464298 464645 . + 0 ID=cds-WJG93499.1;Parent=gene-PUW35_02140;Dbxref=NCBI_GP:WJG93499.1;Name=WJG93499.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=PUW35_02140;product=HNH nuclease YajD;protein_id=WJG93499.1;transl_table=11 CP118132.1 Genbank gene 465083 465190 . + . ID=gene-PUW35_02145;Name=PUW35_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02145 CP118132.1 Protein Homology CDS 465083 465190 . + 0 ID=cds-WJG93500.1;Parent=gene-PUW35_02145;Dbxref=NCBI_GP:WJG93500.1;Name=WJG93500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=PUW35_02145;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WJG93500.1;transl_table=11 CP118132.1 Genbank gene 465274 466137 . - . ID=gene-PUW35_02150;Name=PUW35_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02150 CP118132.1 Protein Homology CDS 465274 466137 . - 0 ID=cds-WJG93501.1;Parent=gene-PUW35_02150;Dbxref=NCBI_GP:WJG93501.1;Name=WJG93501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=PUW35_02150;product=nucleoside-specific channel-forming protein Tsx;protein_id=WJG93501.1;transl_table=11 CP118132.1 Genbank gene 466437 466976 . - . ID=gene-PUW35_02155;Name=PUW35_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02155 CP118132.1 Protein Homology CDS 466437 466976 . - 0 ID=cds-WJG93502.1;Parent=gene-PUW35_02155;Dbxref=NCBI_GP:WJG93502.1;Name=WJG93502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=PUW35_02155;product=DUF3251 domain-containing protein;protein_id=WJG93502.1;transl_table=11 CP118132.1 Genbank gene 467128 467577 . + . ID=gene-PUW35_02160;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=PUW35_02160 CP118132.1 Protein Homology CDS 467128 467577 . + 0 ID=cds-WJG93503.1;Parent=gene-PUW35_02160;Dbxref=NCBI_GP:WJG93503.1;Name=WJG93503.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=PUW35_02160;product=transcriptional regulator NrdR;protein_id=WJG93503.1;transl_table=11 CP118132.1 Genbank gene 467581 468684 . + . ID=gene-PUW35_02165;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=PUW35_02165 CP118132.1 Protein Homology CDS 467581 468684 . + 0 ID=cds-WJG93504.1;Parent=gene-PUW35_02165;Dbxref=NCBI_GP:WJG93504.1;Name=WJG93504.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=PUW35_02165;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WJG93504.1;transl_table=11 CP118132.1 Genbank gene 468773 469243 . + . ID=gene-PUW35_02170;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PUW35_02170 CP118132.1 Protein Homology CDS 468773 469243 . + 0 ID=cds-WJG93505.1;Parent=gene-PUW35_02170;Dbxref=NCBI_GP:WJG93505.1;Name=WJG93505.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=PUW35_02170;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WJG93505.1;transl_table=11 CP118132.1 Genbank gene 469264 469683 . + . ID=gene-PUW35_02175;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=PUW35_02175 CP118132.1 Protein Homology CDS 469264 469683 . + 0 ID=cds-WJG93506.1;Parent=gene-PUW35_02175;Dbxref=NCBI_GP:WJG93506.1;Name=WJG93506.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=PUW35_02175;product=transcription antitermination factor NusB;protein_id=WJG93506.1;transl_table=11 CP118132.1 Genbank gene 469762 470742 . + . ID=gene-PUW35_02180;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=PUW35_02180 CP118132.1 Protein Homology CDS 469762 470742 . + 0 ID=cds-WJG93507.1;Parent=gene-PUW35_02180;Dbxref=NCBI_GP:WJG93507.1;Name=WJG93507.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=PUW35_02180;product=thiamine-phosphate kinase;protein_id=WJG93507.1;transl_table=11 CP118132.1 Genbank gene 470720 471235 . + . ID=gene-PUW35_02185;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=PUW35_02185 CP118132.1 Protein Homology CDS 470720 471235 . + 0 ID=cds-WJG93508.1;Parent=gene-PUW35_02185;Dbxref=NCBI_GP:WJG93508.1;Name=WJG93508.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=PUW35_02185;product=phosphatidylglycerophosphatase A;protein_id=WJG93508.1;transl_table=11 CP118132.1 Genbank gene 471339 472313 . - . ID=gene-PUW35_02190;Name=PUW35_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02190 CP118132.1 Protein Homology CDS 471339 472313 . - 0 ID=cds-WJG93509.1;Parent=gene-PUW35_02190;Dbxref=NCBI_GP:WJG93509.1;Name=WJG93509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=PUW35_02190;product=aldo/keto reductase;protein_id=WJG93509.1;transl_table=11 CP118132.1 Genbank pseudogene 472370 474231 . - . ID=gene-PUW35_02195;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=pseudogene;locus_tag=PUW35_02195;pseudo=true CP118132.1 Protein Homology CDS 472370 474231 . - 0 ID=cds-PUW35_02195;Parent=gene-PUW35_02195;Note=frameshifted;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=PUW35_02195;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 474255 475154 . - . ID=gene-PUW35_02200;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=PUW35_02200 CP118132.1 Protein Homology CDS 474255 475154 . - 0 ID=cds-WJG93510.1;Parent=gene-PUW35_02200;Dbxref=NCBI_GP:WJG93510.1;Name=WJG93510.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=PUW35_02200;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WJG93510.1;transl_table=11 CP118132.1 Genbank gene 475155 475397 . - . ID=gene-PUW35_02205;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=PUW35_02205 CP118132.1 Protein Homology CDS 475155 475397 . - 0 ID=cds-WJG93511.1;Parent=gene-PUW35_02205;Dbxref=NCBI_GP:WJG93511.1;Name=WJG93511.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=PUW35_02205;product=exodeoxyribonuclease VII small subunit;protein_id=WJG93511.1;transl_table=11 CP118132.1 Genbank gene 475607 477055 . + . ID=gene-PUW35_02210;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=PUW35_02210 CP118132.1 Protein Homology CDS 475607 477055 . + 0 ID=cds-WJG93512.1;Parent=gene-PUW35_02210;Dbxref=NCBI_GP:WJG93512.1;Name=WJG93512.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=PUW35_02210;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WJG93512.1;transl_table=11 CP118132.1 Genbank gene 477099 477896 . - . ID=gene-PUW35_02215;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=PUW35_02215 CP118132.1 Protein Homology CDS 477099 477896 . - 0 ID=cds-WJG93513.1;Parent=gene-PUW35_02215;Dbxref=NCBI_GP:WJG93513.1;Name=WJG93513.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnV;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=PUW35_02215;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WJG93513.1;transl_table=11 CP118132.1 Genbank pseudogene 477890 478758 . - . ID=gene-PUW35_02220;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=pseudogene;locus_tag=PUW35_02220;pseudo=true CP118132.1 Protein Homology CDS 477890 478758 . - 0 ID=cds-PUW35_02220;Parent=gene-PUW35_02220;Note=frameshifted;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnU;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052714.1;locus_tag=PUW35_02220;product=2-aminoethylphosphonate ABC transporter permease subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 478761 479870 . - . ID=gene-PUW35_02225;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=PUW35_02225 CP118132.1 Protein Homology CDS 478761 479870 . - 0 ID=cds-WJG93514.1;Parent=gene-PUW35_02225;Dbxref=NCBI_GP:WJG93514.1;Name=WJG93514.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=PUW35_02225;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WJG93514.1;transl_table=11 CP118132.1 Genbank gene 479876 480889 . - . ID=gene-PUW35_02230;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=PUW35_02230 CP118132.1 Protein Homology CDS 479876 480889 . - 0 ID=cds-WJG93515.1;Parent=gene-PUW35_02230;Dbxref=NCBI_GP:WJG93515.1;Name=WJG93515.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=PUW35_02230;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WJG93515.1;transl_table=11 CP118132.1 Genbank gene 481087 481806 . - . ID=gene-PUW35_02235;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=PUW35_02235 CP118132.1 Protein Homology CDS 481087 481806 . - 0 ID=cds-WJG93516.1;Parent=gene-PUW35_02235;Dbxref=NCBI_GP:WJG93516.1;Name=WJG93516.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=PUW35_02235;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WJG93516.1;transl_table=11 CP118132.1 Genbank gene 481946 483049 . + . ID=gene-PUW35_02240;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=PUW35_02240 CP118132.1 Protein Homology CDS 481946 483049 . + 0 ID=cds-WJG93517.1;Parent=gene-PUW35_02240;Dbxref=NCBI_GP:WJG93517.1;Name=WJG93517.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=PUW35_02240;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WJG93517.1;transl_table=11 CP118132.1 Genbank gene 483059 483868 . + . ID=gene-PUW35_02245;Name=PUW35_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02245 CP118132.1 Protein Homology CDS 483059 483868 . + 0 ID=cds-WJG95005.1;Parent=gene-PUW35_02245;Dbxref=NCBI_GP:WJG95005.1;Name=WJG95005.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=PUW35_02245;product=phosphonoacetaldehyde hydrolase;protein_id=WJG95005.1;transl_table=11 CP118132.1 Genbank gene 484011 484601 . - . ID=gene-PUW35_02250;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=PUW35_02250 CP118132.1 Protein Homology CDS 484011 484601 . - 0 ID=cds-WJG93518.1;Parent=gene-PUW35_02250;Dbxref=NCBI_GP:WJG93518.1;Name=WJG93518.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=PUW35_02250;product=protein deglycase YajL;protein_id=WJG93518.1;transl_table=11 CP118132.1 Genbank gene 484564 485475 . - . ID=gene-PUW35_02255;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=PUW35_02255 CP118132.1 Protein Homology CDS 484564 485475 . - 0 ID=cds-WJG93519.1;Parent=gene-PUW35_02255;Dbxref=NCBI_GP:WJG93519.1;Name=WJG93519.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=PUW35_02255;product=2-dehydropantoate 2-reductase;protein_id=WJG93519.1;transl_table=11 CP118132.1 Genbank gene 485601 486092 . + . ID=gene-PUW35_02260;Name=PUW35_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02260 CP118132.1 Protein Homology CDS 485601 486092 . + 0 ID=cds-WJG93520.1;Parent=gene-PUW35_02260;Dbxref=NCBI_GP:WJG93520.1;Name=WJG93520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=PUW35_02260;product=YajQ family cyclic di-GMP-binding protein;protein_id=WJG93520.1;transl_table=11 CP118132.1 Genbank gene 486139 487503 . - . ID=gene-PUW35_02265;Name=PUW35_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02265 CP118132.1 Protein Homology CDS 486139 487503 . - 0 ID=cds-WJG93521.1;Parent=gene-PUW35_02265;Dbxref=NCBI_GP:WJG93521.1;Name=WJG93521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=PUW35_02265;product=MFS transporter;protein_id=WJG93521.1;transl_table=11 CP118132.1 Genbank pseudogene 488028 489538 . + . ID=gene-PUW35_02270;Name=PUW35_02270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02270;pseudo=true CP118132.1 Protein Homology CDS 488028 489538 . + 0 ID=cds-PUW35_02270;Parent=gene-PUW35_02270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=PUW35_02270;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 489550 491043 . + . ID=gene-PUW35_02275;Name=PUW35_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02275 CP118132.1 Protein Homology CDS 489550 491043 . + 0 ID=cds-WJG93522.1;Parent=gene-PUW35_02275;Dbxref=NCBI_GP:WJG93522.1;Name=WJG93522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=PUW35_02275;product=tetratricopeptide repeat protein;protein_id=WJG93522.1;transl_table=11 CP118132.1 Genbank gene 491125 492015 . - . ID=gene-PUW35_02280;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=PUW35_02280 CP118132.1 Protein Homology CDS 491125 492015 . - 0 ID=cds-WJG93523.1;Parent=gene-PUW35_02280;Dbxref=NCBI_GP:WJG93523.1;Name=WJG93523.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=PUW35_02280;product=heme o synthase;protein_id=WJG93523.1;transl_table=11 CP118132.1 Genbank gene 492027 492356 . - . ID=gene-PUW35_02285;Name=PUW35_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02285 CP118132.1 Protein Homology CDS 492027 492356 . - 0 ID=cds-WJG93524.1;Parent=gene-PUW35_02285;Dbxref=NCBI_GP:WJG93524.1;Name=WJG93524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=PUW35_02285;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WJG93524.1;transl_table=11 CP118132.1 Genbank gene 492356 492970 . - . ID=gene-PUW35_02290;Name=PUW35_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02290 CP118132.1 Protein Homology CDS 492356 492970 . - 0 ID=cds-WJG93525.1;Parent=gene-PUW35_02290;Dbxref=NCBI_GP:WJG93525.1;Name=WJG93525.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=PUW35_02290;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WJG93525.1;transl_table=11 CP118132.1 Genbank gene 492960 494951 . - . ID=gene-PUW35_02295;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=PUW35_02295 CP118132.1 Protein Homology CDS 492960 494951 . - 0 ID=cds-WJG93526.1;Parent=gene-PUW35_02295;Dbxref=NCBI_GP:WJG93526.1;Name=WJG93526.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=PUW35_02295;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WJG93526.1;transl_table=11 CP118132.1 Genbank gene 494962 495918 . - . ID=gene-PUW35_02300;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=PUW35_02300 CP118132.1 Protein Homology CDS 494962 495918 . - 0 ID=cds-WJG93527.1;Parent=gene-PUW35_02300;Dbxref=NCBI_GP:WJG93527.1;Name=WJG93527.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=PUW35_02300;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WJG93527.1;transl_table=11 CP118132.1 Genbank pseudogene 496370 497844 . - . ID=gene-PUW35_02305;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=pseudogene;locus_tag=PUW35_02305;pseudo=true CP118132.1 Protein Homology CDS 496370 497844 . - 0 ID=cds-PUW35_02305;Parent=gene-PUW35_02305;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=PUW35_02305;product=muropeptide MFS transporter AmpG;pseudo=true;transl_table=11 CP118132.1 Genbank gene 497888 498466 . - . ID=gene-PUW35_02310;Name=PUW35_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02310 CP118132.1 Protein Homology CDS 497888 498466 . - 0 ID=cds-WJG93528.1;Parent=gene-PUW35_02310;Dbxref=NCBI_GP:WJG93528.1;Name=WJG93528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=PUW35_02310;product=lipoprotein;protein_id=WJG93528.1;transl_table=11 CP118132.1 Genbank gene 498770 499087 . + . ID=gene-PUW35_02315;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=PUW35_02315 CP118132.1 Protein Homology CDS 498770 499087 . + 0 ID=cds-WJG93529.1;Parent=gene-PUW35_02315;Dbxref=NCBI_GP:WJG93529.1;Name=WJG93529.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=PUW35_02315;product=transcriptional regulator BolA;protein_id=WJG93529.1;transl_table=11 CP118132.1 Genbank gene 499434 500732 . + . ID=gene-PUW35_02320;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=PUW35_02320 CP118132.1 Protein Homology CDS 499434 500732 . + 0 ID=cds-WJG93530.1;Parent=gene-PUW35_02320;Dbxref=NCBI_GP:WJG93530.1;Name=WJG93530.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=PUW35_02320;product=trigger factor;protein_id=WJG93530.1;transl_table=11 CP118132.1 Genbank gene 500980 501603 . + . ID=gene-PUW35_02325;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=PUW35_02325 CP118132.1 Protein Homology CDS 500980 501603 . + 0 ID=cds-WJG93531.1;Parent=gene-PUW35_02325;Dbxref=NCBI_GP:WJG93531.1;Name=WJG93531.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=PUW35_02325;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WJG93531.1;transl_table=11 CP118132.1 Genbank gene 501855 503126 . + . ID=gene-PUW35_02330;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=PUW35_02330 CP118132.1 Protein Homology CDS 501855 503126 . + 0 ID=cds-WJG93532.1;Parent=gene-PUW35_02330;Dbxref=NCBI_GP:WJG93532.1;Name=WJG93532.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=PUW35_02330;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WJG93532.1;transl_table=11 CP118132.1 Genbank gene 503312 505666 . + . ID=gene-PUW35_02335;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=PUW35_02335 CP118132.1 Protein Homology CDS 503312 505666 . + 0 ID=cds-WJG93533.1;Parent=gene-PUW35_02335;Dbxref=NCBI_GP:WJG93533.1;Name=WJG93533.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=PUW35_02335;product=endopeptidase La;protein_id=WJG93533.1;transl_table=11 CP118132.1 Genbank gene 505857 506147 . + . ID=gene-PUW35_02340;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=PUW35_02340 CP118132.1 Protein Homology CDS 505857 506147 . + 0 ID=cds-WJG95006.1;Parent=gene-PUW35_02340;Dbxref=NCBI_GP:WJG95006.1;Name=WJG95006.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=PUW35_02340;product=DNA-binding protein HU-beta;protein_id=WJG95006.1;transl_table=11 CP118132.1 Genbank gene 506438 508309 . + . ID=gene-PUW35_02345;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=PUW35_02345 CP118132.1 Protein Homology CDS 506438 508309 . + 0 ID=cds-WJG93534.1;Parent=gene-PUW35_02345;Dbxref=NCBI_GP:WJG93534.1;Name=WJG93534.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=PUW35_02345;product=peptidylprolyl isomerase;protein_id=WJG93534.1;transl_table=11 CP118132.1 Genbank gene 508459 508833 . + . ID=gene-PUW35_02350;Name=PUW35_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02350 CP118132.1 Protein Homology CDS 508459 508833 . + 0 ID=cds-WJG93535.1;Parent=gene-PUW35_02350;Dbxref=NCBI_GP:WJG93535.1;Name=WJG93535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=PUW35_02350;product=helix-hairpin-helix domain-containing protein;protein_id=WJG93535.1;transl_table=11 CP118132.1 Genbank pseudogene 508937 509333 . + . ID=gene-PUW35_02355;Name=PUW35_02355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02355;pseudo=true CP118132.1 Protein Homology CDS 508937 509333 . + 0 ID=cds-PUW35_02355;Parent=gene-PUW35_02355;Note=frameshifted;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=PUW35_02355;product=YbgC/FadM family acyl-CoA thioesterase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 509439 510134 . - . ID=gene-PUW35_02360;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=PUW35_02360 CP118132.1 Protein Homology CDS 509439 510134 . - 0 ID=cds-WJG93536.1;Parent=gene-PUW35_02360;Dbxref=NCBI_GP:WJG93536.1;Name=WJG93536.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=PUW35_02360;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WJG93536.1;transl_table=11 CP118132.1 Genbank gene 510199 511899 . - . ID=gene-PUW35_02365;Name=PUW35_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02365 CP118132.1 Protein Homology CDS 510199 511899 . - 0 ID=cds-WJG93537.1;Parent=gene-PUW35_02365;Dbxref=NCBI_GP:WJG93537.1;Name=WJG93537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=PUW35_02365;product=SgrR family transcriptional regulator;protein_id=WJG93537.1;transl_table=11 CP118132.1 Genbank pseudogene 512000 512817 . + . ID=gene-PUW35_02370;Name=cof;gbkey=Gene;gene=cof;gene_biotype=pseudogene;locus_tag=PUW35_02370;pseudo=true CP118132.1 Protein Homology CDS 512000 512817 . + 0 ID=cds-PUW35_02370;Parent=gene-PUW35_02370;Note=frameshifted;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=PUW35_02370;product=HMP-PP phosphatase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 512867 513922 . - . ID=gene-PUW35_02375;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=PUW35_02375 CP118132.1 Protein Homology CDS 512867 513922 . - 0 ID=cds-WJG93538.1;Parent=gene-PUW35_02375;Dbxref=NCBI_GP:WJG93538.1;Name=WJG93538.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=PUW35_02375;product=cysteine desulfhydrase;protein_id=WJG93538.1;transl_table=11 CP118132.1 Genbank gene 514035 514493 . + . ID=gene-PUW35_02380;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=PUW35_02380 CP118132.1 Protein Homology CDS 514035 514493 . + 0 ID=cds-WJG93539.1;Parent=gene-PUW35_02380;Dbxref=NCBI_GP:WJG93539.1;Name=WJG93539.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=PUW35_02380;product=DNA-binding transcriptional regulator DecR;protein_id=WJG93539.1;transl_table=11 CP118132.1 Genbank gene 514534 516306 . + . ID=gene-PUW35_02385;Name=PUW35_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02385 CP118132.1 Protein Homology CDS 514534 516306 . + 0 ID=cds-WJG93540.1;Parent=gene-PUW35_02385;Dbxref=NCBI_GP:WJG93540.1;Name=WJG93540.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=PUW35_02385;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WJG93540.1;transl_table=11 CP118132.1 Genbank gene 516299 518080 . + . ID=gene-PUW35_02390;Name=PUW35_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02390 CP118132.1 Protein Homology CDS 516299 518080 . + 0 ID=cds-WJG93541.1;Parent=gene-PUW35_02390;Dbxref=NCBI_GP:WJG93541.1;Name=WJG93541.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=PUW35_02390;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WJG93541.1;transl_table=11 CP118132.1 Genbank gene 518293 518631 . + . ID=gene-PUW35_02395;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=PUW35_02395 CP118132.1 Protein Homology CDS 518293 518631 . + 0 ID=cds-WJG93542.1;Parent=gene-PUW35_02395;Dbxref=NCBI_GP:WJG93542.1;Name=WJG93542.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=PUW35_02395;product=P-II family nitrogen regulator;protein_id=WJG93542.1;transl_table=11 CP118132.1 Genbank gene 518663 519949 . + . ID=gene-PUW35_02400;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=PUW35_02400 CP118132.1 Protein Homology CDS 518663 519949 . + 0 ID=cds-WJG93543.1;Parent=gene-PUW35_02400;Dbxref=NCBI_GP:WJG93543.1;Name=WJG93543.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=PUW35_02400;product=ammonium transporter AmtB;protein_id=WJG93543.1;transl_table=11 CP118132.1 Genbank gene 520049 520909 . - . ID=gene-PUW35_02405;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=PUW35_02405 CP118132.1 Protein Homology CDS 520049 520909 . - 0 ID=cds-WJG93544.1;Parent=gene-PUW35_02405;Dbxref=NCBI_GP:WJG93544.1;Name=WJG93544.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=PUW35_02405;product=acyl-CoA thioesterase II;protein_id=WJG93544.1;transl_table=11 CP118132.1 Genbank gene 521124 521693 . + . ID=gene-PUW35_02410;Name=PUW35_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02410 CP118132.1 Protein Homology CDS 521124 521693 . + 0 ID=cds-WJG93545.1;Parent=gene-PUW35_02410;Dbxref=NCBI_GP:WJG93545.1;Name=WJG93545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=PUW35_02410;product=YbaY family lipoprotein;protein_id=WJG93545.1;transl_table=11 CP118132.1 Genbank gene 521726 522115 . - . ID=gene-PUW35_02415;Name=PUW35_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02415 CP118132.1 Protein Homology CDS 521726 522115 . - 0 ID=cds-WJG93546.1;Parent=gene-PUW35_02415;Dbxref=NCBI_GP:WJG93546.1;Name=WJG93546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=PUW35_02415;product=MGMT family protein;protein_id=WJG93546.1;transl_table=11 CP118132.1 Genbank gene 522200 522296 . + . ID=gene-PUW35_02420;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=PUW35_02420 CP118132.1 cmsearch SRP_RNA 522200 522296 . + . ID=rna-PUW35_02420;Parent=gene-PUW35_02420;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_02420;product=signal recognition particle sRNA small type CP118132.1 cmsearch exon 522200 522296 . + . ID=exon-PUW35_02420-1;Parent=rna-PUW35_02420;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_02420;product=signal recognition particle sRNA small type CP118132.1 Genbank gene 522346 523896 . - . ID=gene-PUW35_02425;Name=PUW35_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02425 CP118132.1 Protein Homology CDS 522346 523896 . - 0 ID=cds-WJG93547.1;Parent=gene-PUW35_02425;Dbxref=NCBI_GP:WJG93547.1;Name=WJG93547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=PUW35_02425;product=EAL domain-containing protein;protein_id=WJG93547.1;transl_table=11 CP118132.1 Genbank gene 524121 524381 . + . ID=gene-PUW35_02430;Name=PUW35_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02430 CP118132.1 Protein Homology CDS 524121 524381 . + 0 ID=cds-WJG93548.1;Parent=gene-PUW35_02430;Dbxref=NCBI_GP:WJG93548.1;Name=WJG93548.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=PUW35_02430;product=type B 50S ribosomal protein L31;protein_id=WJG93548.1;transl_table=11 CP118132.1 Genbank pseudogene 524387 524526 . + . ID=gene-PUW35_02435;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=pseudogene;locus_tag=PUW35_02435;pseudo=true CP118132.1 Protein Homology CDS 524387 524526 . + 0 ID=cds-PUW35_02435;Parent=gene-PUW35_02435;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=PUW35_02435;product=type B 50S ribosomal protein L36;pseudo=true;transl_table=11 CP118132.1 Genbank gene 524582 525052 . - . ID=gene-PUW35_02440;Name=PUW35_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02440 CP118132.1 Protein Homology CDS 524582 525052 . - 0 ID=cds-WJG93549.1;Parent=gene-PUW35_02440;Dbxref=NCBI_GP:WJG93549.1;Name=WJG93549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=PUW35_02440;product=YlaC family protein;protein_id=WJG93549.1;transl_table=11 CP118132.1 Genbank gene 525170 525721 . - . ID=gene-PUW35_02445;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=PUW35_02445 CP118132.1 Protein Homology CDS 525170 525721 . - 0 ID=cds-WJG93550.1;Parent=gene-PUW35_02445;Dbxref=NCBI_GP:WJG93550.1;Name=WJG93550.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=PUW35_02445;product=maltose O-acetyltransferase;protein_id=WJG93550.1;transl_table=11 CP118132.1 Genbank gene 525900 526118 . - . ID=gene-PUW35_02450;Name=PUW35_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02450 CP118132.1 Protein Homology CDS 525900 526118 . - 0 ID=cds-WJG93551.1;Parent=gene-PUW35_02450;Dbxref=NCBI_GP:WJG93551.1;Name=WJG93551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=PUW35_02450;product=HHA domain-containing protein;protein_id=WJG93551.1;transl_table=11 CP118132.1 Genbank gene 526146 526520 . - . ID=gene-PUW35_02455;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=PUW35_02455 CP118132.1 Protein Homology CDS 526146 526520 . - 0 ID=cds-WJG93552.1;Parent=gene-PUW35_02455;Dbxref=NCBI_GP:WJG93552.1;Name=WJG93552.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=PUW35_02455;product=Hha toxicity modulator TomB;protein_id=WJG93552.1;transl_table=11 CP118132.1 Genbank gene 527016 530165 . - . ID=gene-PUW35_02460;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=PUW35_02460 CP118132.1 Protein Homology CDS 527016 530165 . - 0 ID=cds-WJG93553.1;Parent=gene-PUW35_02460;Dbxref=NCBI_GP:WJG93553.1;Name=WJG93553.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=PUW35_02460;product=efflux RND transporter permease AcrB;protein_id=WJG93553.1;transl_table=11 CP118132.1 Genbank gene 530188 531381 . - . ID=gene-PUW35_02465;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=PUW35_02465 CP118132.1 Protein Homology CDS 530188 531381 . - 0 ID=cds-WJG93554.1;Parent=gene-PUW35_02465;Dbxref=NCBI_GP:WJG93554.1;Name=WJG93554.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=PUW35_02465;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WJG93554.1;transl_table=11 CP118132.1 Genbank gene 531523 532176 . + . ID=gene-PUW35_02470;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=PUW35_02470 CP118132.1 Protein Homology CDS 531523 532176 . + 0 ID=cds-WJG93555.1;Parent=gene-PUW35_02470;Dbxref=NCBI_GP:WJG93555.1;Name=WJG93555.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=PUW35_02470;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WJG93555.1;transl_table=11 CP118132.1 Genbank gene 532295 535657 . + . ID=gene-PUW35_02475;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=PUW35_02475 CP118132.1 Protein Homology CDS 532295 535657 . + 0 ID=cds-WJG93556.1;Parent=gene-PUW35_02475;Dbxref=NCBI_GP:WJG93556.1;Name=WJG93556.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=PUW35_02475;product=mechanosensitive channel MscK;protein_id=WJG93556.1;transl_table=11 CP118132.1 Genbank gene 535699 536634 . - . ID=gene-PUW35_02480;Name=PUW35_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02480 CP118132.1 Protein Homology CDS 535699 536634 . - 0 ID=cds-WJG93557.1;Parent=gene-PUW35_02480;Dbxref=NCBI_GP:WJG93557.1;Name=WJG93557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=PUW35_02480;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG93557.1;transl_table=11 CP118132.1 Genbank gene 536704 536871 . - . ID=gene-PUW35_02485;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=PUW35_02485 CP118132.1 Protein Homology CDS 536704 536871 . - 0 ID=cds-WJG93558.1;Parent=gene-PUW35_02485;Dbxref=NCBI_GP:WJG93558.1;Name=WJG93558.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=PUW35_02485;product=pleiotropic regulatory protein RsmS;protein_id=WJG93558.1;transl_table=11 CP118132.1 Genbank gene 536885 537412 . - . ID=gene-PUW35_02490;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=PUW35_02490 CP118132.1 Protein Homology CDS 536885 537412 . - 0 ID=cds-WJG93559.1;Parent=gene-PUW35_02490;Dbxref=NCBI_GP:WJG93559.1;Name=WJG93559.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=PUW35_02490;product=primosomal replication protein N'';protein_id=WJG93559.1;transl_table=11 CP118132.1 Genbank gene 537481 537858 . + . ID=gene-PUW35_02495;Name=PUW35_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02495 CP118132.1 Protein Homology CDS 537481 537858 . + 0 ID=cds-WJG93560.1;Parent=gene-PUW35_02495;Dbxref=NCBI_GP:WJG93560.1;Name=WJG93560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=PUW35_02495;product=DUF454 family protein;protein_id=WJG93560.1;transl_table=11 CP118132.1 Genbank gene 538011 538562 . + . ID=gene-PUW35_02500;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=PUW35_02500 CP118132.1 Protein Homology CDS 538011 538562 . + 0 ID=cds-WJG93561.1;Parent=gene-PUW35_02500;Dbxref=NCBI_GP:WJG93561.1;Name=WJG93561.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=PUW35_02500;product=adenine phosphoribosyltransferase;protein_id=WJG93561.1;transl_table=11 CP118132.1 Genbank gene 538676 540604 . + . ID=gene-PUW35_02505;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=PUW35_02505 CP118132.1 Protein Homology CDS 538676 540604 . + 0 ID=cds-WJG93562.1;Parent=gene-PUW35_02505;Dbxref=NCBI_GP:WJG93562.1;Name=WJG93562.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=PUW35_02505;product=DNA polymerase III subunit gamma/tau;protein_id=WJG93562.1;transl_table=11 CP118132.1 cmsearch sequence_feature 539937 540001 . + . ID=id-PUW35_02505;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_02505 CP118132.1 Genbank gene 540648 540977 . + . ID=gene-PUW35_02510;Name=PUW35_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02510 CP118132.1 Protein Homology CDS 540648 540977 . + 0 ID=cds-WJG93563.1;Parent=gene-PUW35_02510;Dbxref=NCBI_GP:WJG93563.1;Name=WJG93563.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=PUW35_02510;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WJG93563.1;transl_table=11 CP118132.1 Genbank gene 540977 541582 . + . ID=gene-PUW35_02515;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=PUW35_02515 CP118132.1 Protein Homology CDS 540977 541582 . + 0 ID=cds-WJG93564.1;Parent=gene-PUW35_02515;Dbxref=NCBI_GP:WJG93564.1;Name=WJG93564.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=PUW35_02515;product=recombination mediator RecR;protein_id=WJG93564.1;transl_table=11 CP118132.1 Genbank pseudogene 541693 543566 . + . ID=gene-PUW35_02520;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=pseudogene;locus_tag=PUW35_02520;pseudo=true CP118132.1 Protein Homology CDS 541693 543566 . + 0 ID=cds-PUW35_02520;Parent=gene-PUW35_02520;Note=frameshifted;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=PUW35_02520;product=molecular chaperone HtpG;pseudo=true;transl_table=11 CP118132.1 Genbank gene 543924 544568 . + . ID=gene-PUW35_02525;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=PUW35_02525 CP118132.1 Protein Homology CDS 543924 544568 . + 0 ID=cds-WJG93565.1;Parent=gene-PUW35_02525;Dbxref=NCBI_GP:WJG93565.1;Name=WJG93565.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=PUW35_02525;product=adenylate kinase;protein_id=WJG93565.1;transl_table=11 CP118132.1 Genbank gene 544797 545759 . + . ID=gene-PUW35_02530;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=PUW35_02530 CP118132.1 Protein Homology CDS 544797 545759 . + 0 ID=cds-WJG93566.1;Parent=gene-PUW35_02530;Dbxref=NCBI_GP:WJG93566.1;Name=WJG93566.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=PUW35_02530;product=ferrochelatase;protein_id=WJG93566.1;transl_table=11 CP118132.1 Genbank pseudogene 545756 546701 . - . ID=gene-PUW35_02535;Name=aes;gbkey=Gene;gene=aes;gene_biotype=pseudogene;locus_tag=PUW35_02535;pseudo=true CP118132.1 Protein Homology CDS 545756 546701 . - 0 ID=cds-PUW35_02535;Parent=gene-PUW35_02535;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=PUW35_02535;product=acetyl esterase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 546854 548158 . + . ID=gene-PUW35_02540;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=PUW35_02540 CP118132.1 Protein Homology CDS 546854 548158 . + 0 ID=cds-WJG93567.1;Parent=gene-PUW35_02540;Dbxref=NCBI_GP:WJG93567.1;Name=WJG93567.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=PUW35_02540;product=inosine/guanosine kinase;protein_id=WJG93567.1;transl_table=11 CP118132.1 Genbank gene 548207 549883 . - . ID=gene-PUW35_02545;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=PUW35_02545 CP118132.1 Protein Homology CDS 548207 549883 . - 0 ID=cds-WJG93568.1;Parent=gene-PUW35_02545;Dbxref=NCBI_GP:WJG93568.1;Name=WJG93568.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=PUW35_02545;product=YbaL family putative K(+) efflux transporter;protein_id=WJG93568.1;transl_table=11 CP118132.1 Genbank gene 550098 551318 . - . ID=gene-PUW35_02550;Name=PUW35_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02550 CP118132.1 Protein Homology CDS 550098 551318 . - 0 ID=cds-WJG93569.1;Parent=gene-PUW35_02550;Dbxref=NCBI_GP:WJG93569.1;Name=WJG93569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=PUW35_02550;product=MFS transporter;protein_id=WJG93569.1;transl_table=11 CP118132.1 Genbank gene 551491 553143 . + . ID=gene-PUW35_02555;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=PUW35_02555 CP118132.1 Protein Homology CDS 551491 553143 . + 0 ID=cds-WJG93570.1;Parent=gene-PUW35_02555;Dbxref=NCBI_GP:WJG93570.1;Name=WJG93570.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=PUW35_02555;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WJG93570.1;transl_table=11 CP118132.1 Genbank gene 553260 553739 . - . ID=gene-PUW35_02560;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=PUW35_02560 CP118132.1 Protein Homology CDS 553260 553739 . - 0 ID=cds-WJG93571.1;Parent=gene-PUW35_02560;Dbxref=NCBI_GP:WJG93571.1;Name=WJG93571.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=PUW35_02560;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WJG93571.1;transl_table=11 CP118132.1 Genbank gene 553941 554735 . - . ID=gene-PUW35_02565;Name=PUW35_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02565 CP118132.1 Protein Homology CDS 553941 554735 . - 0 ID=cds-WJG93572.1;Parent=gene-PUW35_02565;Dbxref=NCBI_GP:WJG93572.1;Name=WJG93572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=PUW35_02565;product=TraB/GumN family protein;protein_id=WJG93572.1;transl_table=11 CP118132.1 Genbank gene 554821 555648 . - . ID=gene-PUW35_02570;Name=PUW35_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02570 CP118132.1 Protein Homology CDS 554821 555648 . - 0 ID=cds-WJG93573.1;Parent=gene-PUW35_02570;Dbxref=NCBI_GP:WJG93573.1;Name=WJG93573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=PUW35_02570;product=DUF1311 domain-containing protein;protein_id=WJG93573.1;transl_table=11 CP118132.1 Genbank gene 555802 558303 . - . ID=gene-PUW35_02575;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=PUW35_02575 CP118132.1 Protein Homology CDS 555802 558303 . - 0 ID=cds-WJG93574.1;Parent=gene-PUW35_02575;Dbxref=NCBI_GP:WJG93574.1;Name=WJG93574.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=PUW35_02575;product=copper-exporting P-type ATPase CopA;protein_id=WJG93574.1;transl_table=11 CP118132.1 Genbank gene 558413 558829 . + . ID=gene-PUW35_02580;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=PUW35_02580 CP118132.1 Protein Homology CDS 558413 558829 . + 0 ID=cds-WJG93575.1;Parent=gene-PUW35_02580;Dbxref=NCBI_GP:WJG93575.1;Name=WJG93575.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=PUW35_02580;product=Cu(I)-responsive transcriptional regulator;protein_id=WJG93575.1;transl_table=11 CP118132.1 Genbank gene 558830 559282 . - . ID=gene-PUW35_02585;Name=PUW35_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02585 CP118132.1 Protein Homology CDS 558830 559282 . - 0 ID=cds-WJG93576.1;Parent=gene-PUW35_02585;Dbxref=NCBI_GP:WJG93576.1;Name=WJG93576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=PUW35_02585;product=NfeD family protein;protein_id=WJG93576.1;transl_table=11 CP118132.1 Genbank gene 559279 560196 . - . ID=gene-PUW35_02590;Name=PUW35_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02590 CP118132.1 Protein Homology CDS 559279 560196 . - 0 ID=cds-WJG93577.1;Parent=gene-PUW35_02590;Dbxref=NCBI_GP:WJG93577.1;Name=WJG93577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=PUW35_02590;product=SPFH/Band 7/PHB domain protein;protein_id=WJG93577.1;transl_table=11 CP118132.1 Genbank gene 560344 561021 . + . ID=gene-PUW35_02595;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=PUW35_02595 CP118132.1 Protein Homology CDS 560344 561021 . + 0 ID=cds-WJG93578.1;Parent=gene-PUW35_02595;Dbxref=NCBI_GP:WJG93578.1;Name=WJG93578.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=PUW35_02595;product=iron ABC transporter ATP-binding protein FetA;protein_id=WJG93578.1;transl_table=11 CP118132.1 Genbank gene 561008 561787 . + . ID=gene-PUW35_02600;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=PUW35_02600 CP118132.1 Protein Homology CDS 561008 561787 . + 0 ID=cds-WJG93579.1;Parent=gene-PUW35_02600;Dbxref=NCBI_GP:WJG93579.1;Name=WJG93579.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=PUW35_02600;product=iron export ABC transporter permease subunit FetB;protein_id=WJG93579.1;transl_table=11 CP118132.1 Genbank pseudogene 561873 562727 . - . ID=gene-PUW35_02605;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=pseudogene;locus_tag=PUW35_02605;pseudo=true CP118132.1 Protein Homology CDS 561873 562727 . - 0 ID=cds-PUW35_02605;Parent=gene-PUW35_02605;Note=internal stop;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=PUW35_02605;product=chaperedoxin;pseudo=true;transl_table=11 CP118132.1 Genbank gene 562787 563557 . - . ID=gene-PUW35_02610;Name=PUW35_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02610 CP118132.1 Protein Homology CDS 562787 563557 . - 0 ID=cds-WJG93580.1;Parent=gene-PUW35_02610;Dbxref=NCBI_GP:WJG93580.1;Name=WJG93580.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=PUW35_02610;product=SDR family oxidoreductase;protein_id=WJG93580.1;transl_table=11 CP118132.1 Genbank gene 563712 564326 . - . ID=gene-PUW35_02615;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=PUW35_02615 CP118132.1 Protein Homology CDS 563712 564326 . - 0 ID=cds-WJG93581.1;Parent=gene-PUW35_02615;Dbxref=NCBI_GP:WJG93581.1;Name=WJG93581.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=PUW35_02615;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WJG93581.1;transl_table=11 CP118132.1 Genbank gene 564297 564983 . + . ID=gene-PUW35_02620;Name=PUW35_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02620 CP118132.1 Protein Homology CDS 564297 564983 . + 0 ID=cds-WJG93582.1;Parent=gene-PUW35_02620;Dbxref=NCBI_GP:WJG93582.1;Name=WJG93582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=PUW35_02620;product=ABC transporter ATP-binding protein;protein_id=WJG93582.1;transl_table=11 CP118132.1 Genbank pseudogene 564980 567394 . + . ID=gene-PUW35_02625;Name=PUW35_02625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02625;pseudo=true CP118132.1 Protein Homology CDS 564980 567394 . + 0 ID=cds-PUW35_02625;Parent=gene-PUW35_02625;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=PUW35_02625;product=ABC transporter permease;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 567580 568713 . + . ID=gene-PUW35_02630;Name=PUW35_02630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02630;pseudo=true CP118132.1 Protein Homology CDS 567580 568713 . + 0 ID=cds-PUW35_02630;Parent=gene-PUW35_02630;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=PUW35_02630;product=porin;pseudo=true;transl_table=11 CP118132.1 Genbank gene 568970 569800 . + . ID=gene-PUW35_02635;Name=PUW35_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02635 CP118132.1 Protein Homology CDS 568970 569800 . + 0 ID=cds-WJG93583.1;Parent=gene-PUW35_02635;Dbxref=NCBI_GP:WJG93583.1;Name=WJG93583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=PUW35_02635;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WJG93583.1;transl_table=11 CP118132.1 Genbank gene 569837 570853 . + . ID=gene-PUW35_02640;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=PUW35_02640 CP118132.1 Protein Homology CDS 569837 570853 . + 0 ID=cds-WJG93584.1;Parent=gene-PUW35_02640;Dbxref=NCBI_GP:WJG93584.1;Name=WJG93584.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=PUW35_02640;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WJG93584.1;transl_table=11 CP118132.1 Genbank gene 570846 571505 . + . ID=gene-PUW35_02645;Name=PUW35_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02645 CP118132.1 Protein Homology CDS 570846 571505 . + 0 ID=cds-WJG93585.1;Parent=gene-PUW35_02645;Dbxref=NCBI_GP:WJG93585.1;Name=WJG93585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=PUW35_02645;product=ABC transporter permease;protein_id=WJG93585.1;transl_table=11 CP118132.1 Genbank gene 571544 572638 . - . ID=gene-PUW35_02650;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=PUW35_02650 CP118132.1 Protein Homology CDS 571544 572638 . - 0 ID=cds-WJG93586.1;Parent=gene-PUW35_02650;Dbxref=NCBI_GP:WJG93586.1;Name=WJG93586.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=PUW35_02650;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WJG93586.1;transl_table=11 CP118132.1 Genbank pseudogene 572708 573633 . - . ID=gene-PUW35_02655;Name=allS;gbkey=Gene;gene=allS;gene_biotype=pseudogene;locus_tag=PUW35_02655;pseudo=true CP118132.1 Protein Homology CDS 572708 573633 . - 0 ID=cds-PUW35_02655;Parent=gene-PUW35_02655;Note=frameshifted;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=PUW35_02655;product=HTH-type transcriptional activator AllS;pseudo=true;transl_table=11 CP118132.1 Genbank gene 573859 574341 . + . ID=gene-PUW35_02660;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=PUW35_02660 CP118132.1 Protein Homology CDS 573859 574341 . + 0 ID=cds-WJG93587.1;Parent=gene-PUW35_02660;Dbxref=NCBI_GP:WJG93587.1;Name=WJG93587.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764660.1;locus_tag=PUW35_02660;product=ureidoglycolate lyase;protein_id=WJG93587.1;transl_table=11 CP118132.1 Genbank gene 574420 575238 . + . ID=gene-PUW35_02665;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=PUW35_02665 CP118132.1 Protein Homology CDS 574420 575238 . + 0 ID=cds-WJG93588.1;Parent=gene-PUW35_02665;Dbxref=NCBI_GP:WJG93588.1;Name=WJG93588.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=PUW35_02665;product=HTH-type transcriptional repressor AllR;protein_id=WJG93588.1;transl_table=11 CP118132.1 Genbank gene 575323 577104 . + . ID=gene-PUW35_02670;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=PUW35_02670 CP118132.1 Protein Homology CDS 575323 577104 . + 0 ID=cds-WJG93589.1;Parent=gene-PUW35_02670;Dbxref=NCBI_GP:WJG93589.1;Name=WJG93589.1;Ontology_term=GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=PUW35_02670;product=glyoxylate carboligase;protein_id=WJG93589.1;transl_table=11 CP118132.1 Genbank gene 577117 577893 . + . ID=gene-PUW35_02675;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=PUW35_02675 CP118132.1 Protein Homology CDS 577117 577893 . + 0 ID=cds-WJG93590.1;Parent=gene-PUW35_02675;Dbxref=NCBI_GP:WJG93590.1;Name=WJG93590.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=PUW35_02675;product=hydroxypyruvate isomerase;protein_id=WJG93590.1;transl_table=11 CP118132.1 Genbank gene 577993 578871 . + . ID=gene-PUW35_02680;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=PUW35_02680 CP118132.1 Protein Homology CDS 577993 578871 . + 0 ID=cds-WJG93591.1;Parent=gene-PUW35_02680;Dbxref=NCBI_GP:WJG93591.1;Name=WJG93591.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=PUW35_02680;product=2-hydroxy-3-oxopropionate reductase;protein_id=WJG93591.1;transl_table=11 CP118132.1 Genbank gene 578937 580184 . + . ID=gene-PUW35_02685;Name=PUW35_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02685 CP118132.1 Protein Homology CDS 578937 580184 . + 0 ID=cds-WJG93592.1;Parent=gene-PUW35_02685;Dbxref=NCBI_GP:WJG93592.1;Name=WJG93592.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=PUW35_02685;product=MFS transporter;protein_id=WJG93592.1;transl_table=11 CP118132.1 Genbank gene 580280 581734 . + . ID=gene-PUW35_02690;Name=PUW35_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02690 CP118132.1 Protein Homology CDS 580280 581734 . + 0 ID=cds-WJG93593.1;Parent=gene-PUW35_02690;Dbxref=NCBI_GP:WJG93593.1;Name=WJG93593.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=PUW35_02690;product=putative allantoin permease;protein_id=WJG93593.1;transl_table=11 CP118132.1 Genbank gene 581813 583174 . + . ID=gene-PUW35_02695;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=PUW35_02695 CP118132.1 Protein Homology CDS 581813 583174 . + 0 ID=cds-WJG93594.1;Parent=gene-PUW35_02695;Dbxref=NCBI_GP:WJG93594.1;Name=WJG93594.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=PUW35_02695;product=allantoinase AllB;protein_id=WJG93594.1;transl_table=11 CP118132.1 Genbank gene 583233 584531 . + . ID=gene-PUW35_02700;Name=PUW35_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02700 CP118132.1 Protein Homology CDS 583233 584531 . + 0 ID=cds-WJG93595.1;Parent=gene-PUW35_02700;Dbxref=NCBI_GP:WJG93595.1;Name=WJG93595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=PUW35_02700;product=uracil/xanthine transporter;protein_id=WJG93595.1;transl_table=11 CP118132.1 Genbank gene 584554 585702 . + . ID=gene-PUW35_02705;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=PUW35_02705 CP118132.1 Protein Homology CDS 584554 585702 . + 0 ID=cds-WJG95007.1;Parent=gene-PUW35_02705;Dbxref=NCBI_GP:WJG95007.1;Name=WJG95007.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=PUW35_02705;product=glycerate 3-kinase;protein_id=WJG95007.1;transl_table=11 CP118132.1 Genbank gene 585782 586567 . - . ID=gene-PUW35_02710;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=PUW35_02710 CP118132.1 Protein Homology CDS 585782 586567 . - 0 ID=cds-WJG93596.1;Parent=gene-PUW35_02710;Dbxref=NCBI_GP:WJG93596.1;Name=WJG93596.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=PUW35_02710;product=(S)-ureidoglycine aminohydrolase;protein_id=WJG93596.1;transl_table=11 CP118132.1 Genbank gene 586578 587813 . - . ID=gene-PUW35_02715;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=PUW35_02715 CP118132.1 Protein Homology CDS 586578 587813 . - 0 ID=cds-WJG93597.1;Parent=gene-PUW35_02715;Dbxref=NCBI_GP:WJG93597.1;Name=WJG93597.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=PUW35_02715;product=allantoate deiminase;protein_id=WJG93597.1;transl_table=11 CP118132.1 Genbank gene 587835 588884 . - . ID=gene-PUW35_02720;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=PUW35_02720 CP118132.1 Protein Homology CDS 587835 588884 . - 0 ID=cds-WJG93598.1;Parent=gene-PUW35_02720;Dbxref=NCBI_GP:WJG93598.1;Name=WJG93598.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=PUW35_02720;product=ureidoglycolate dehydrogenase;protein_id=WJG93598.1;transl_table=11 CP118132.1 Genbank pseudogene 589199 590863 . + . ID=gene-PUW35_02725;Name=PUW35_02725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02725;pseudo=true CP118132.1 Protein Homology CDS 589199 590863 . + 0 ID=cds-PUW35_02725;Parent=gene-PUW35_02725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=PUW35_02725;product=acyl-CoA synthetase FdrA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 590873 592132 . + . ID=gene-PUW35_02730;Name=PUW35_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02730 CP118132.1 Protein Homology CDS 590873 592132 . + 0 ID=cds-WJG93599.1;Parent=gene-PUW35_02730;Dbxref=NCBI_GP:WJG93599.1;Name=WJG93599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=PUW35_02730;product=DUF1116 domain-containing protein;protein_id=WJG93599.1;transl_table=11 CP118132.1 Genbank pseudogene 592144 592952 . + . ID=gene-PUW35_02735;Name=PUW35_02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02735;pseudo=true CP118132.1 Protein Homology CDS 592144 592952 . + 0 ID=cds-PUW35_02735;Parent=gene-PUW35_02735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=PUW35_02735;product=DUF2877 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 592956 593849 . + . ID=gene-PUW35_02740;Name=PUW35_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02740 CP118132.1 Protein Homology CDS 592956 593849 . + 0 ID=cds-WJG93600.1;Parent=gene-PUW35_02740;Dbxref=NCBI_GP:WJG93600.1;Name=WJG93600.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=PUW35_02740;product=carbamate kinase;protein_id=WJG93600.1;transl_table=11 CP118132.1 Genbank gene 593890 594957 . - . ID=gene-PUW35_02745;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=PUW35_02745 CP118132.1 Protein Homology CDS 593890 594957 . - 0 ID=cds-WJG93601.1;Parent=gene-PUW35_02745;Dbxref=NCBI_GP:WJG93601.1;Name=WJG93601.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=PUW35_02745;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WJG93601.1;transl_table=11 CP118132.1 Genbank gene 594954 595463 . - . ID=gene-PUW35_02750;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=PUW35_02750 CP118132.1 Protein Homology CDS 594954 595463 . - 0 ID=cds-WJG93602.1;Parent=gene-PUW35_02750;Dbxref=NCBI_GP:WJG93602.1;Name=WJG93602.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=PUW35_02750;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WJG93602.1;transl_table=11 CP118132.1 Genbank gene 595581 596303 . - . ID=gene-PUW35_02755;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=PUW35_02755 CP118132.1 Protein Homology CDS 595581 596303 . - 0 ID=cds-WJG93603.1;Parent=gene-PUW35_02755;Dbxref=NCBI_GP:WJG93603.1;Name=WJG93603.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=PUW35_02755;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WJG93603.1;transl_table=11 CP118132.1 Genbank gene 596306 596800 . - . ID=gene-PUW35_02760;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=PUW35_02760 CP118132.1 Protein Homology CDS 596306 596800 . - 0 ID=cds-WJG93604.1;Parent=gene-PUW35_02760;Dbxref=NCBI_GP:WJG93604.1;Name=WJG93604.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=PUW35_02760;product=peptidylprolyl isomerase B;protein_id=WJG93604.1;transl_table=11 CP118132.1 Genbank gene 596973 598358 . + . ID=gene-PUW35_02765;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=PUW35_02765 CP118132.1 Protein Homology CDS 596973 598358 . + 0 ID=cds-WJG93605.1;Parent=gene-PUW35_02765;Dbxref=NCBI_GP:WJG93605.1;Name=WJG93605.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=PUW35_02765;product=cysteine--tRNA ligase;protein_id=WJG93605.1;transl_table=11 CP118132.1 Genbank gene 598402 599226 . - . ID=gene-PUW35_02770;Name=PUW35_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02770 CP118132.1 Protein Homology CDS 598402 599226 . - 0 ID=cds-WJG93606.1;Parent=gene-PUW35_02770;Dbxref=NCBI_GP:WJG93606.1;Name=WJG93606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=PUW35_02770;product=DUF2145 domain-containing protein;protein_id=WJG93606.1;transl_table=11 CP118132.1 Genbank gene 599223 599660 . - . ID=gene-PUW35_02775;Name=PUW35_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02775 CP118132.1 Protein Homology CDS 599223 599660 . - 0 ID=cds-WJG93607.1;Parent=gene-PUW35_02775;Dbxref=NCBI_GP:WJG93607.1;Name=WJG93607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=PUW35_02775;product=STM0539 family protein;protein_id=WJG93607.1;transl_table=11 CP118132.1 Genbank gene 599653 600198 . - . ID=gene-PUW35_02780;Name=PUW35_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02780 CP118132.1 Protein Homology CDS 599653 600198 . - 0 ID=cds-WJG93608.1;Parent=gene-PUW35_02780;Dbxref=NCBI_GP:WJG93608.1;Name=WJG93608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=PUW35_02780;product=metal-dependent hydrolase;protein_id=WJG93608.1;transl_table=11 CP118132.1 Genbank gene 600282 600494 . - . ID=gene-PUW35_02785;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=PUW35_02785 CP118132.1 Protein Homology CDS 600282 600494 . - 0 ID=cds-WJG93609.1;Parent=gene-PUW35_02785;Dbxref=NCBI_GP:WJG93609.1;Name=WJG93609.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=PUW35_02785;product=ribosome-associated protein YbcJ;protein_id=WJG93609.1;transl_table=11 CP118132.1 Genbank gene 600496 601362 . - . ID=gene-PUW35_02790;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=PUW35_02790 CP118132.1 Protein Homology CDS 600496 601362 . - 0 ID=cds-WJG93610.1;Parent=gene-PUW35_02790;Dbxref=NCBI_GP:WJG93610.1;Name=WJG93610.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=PUW35_02790;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WJG93610.1;transl_table=11 CP118132.1 Genbank gene 601908 602465 . + . ID=gene-PUW35_02795;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=PUW35_02795 CP118132.1 Protein Homology CDS 601908 602465 . + 0 ID=cds-WJG93611.1;Parent=gene-PUW35_02795;Dbxref=NCBI_GP:WJG93611.1;Name=WJG93611.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=PUW35_02795;product=type 1 fimbrial protein subunit FimA;protein_id=WJG93611.1;transl_table=11 CP118132.1 Genbank gene 602539 603072 . + . ID=gene-PUW35_02800;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=PUW35_02800 CP118132.1 Protein Homology CDS 602539 603072 . + 0 ID=cds-WJG93612.1;Parent=gene-PUW35_02800;Dbxref=NCBI_GP:WJG93612.1;Name=WJG93612.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=PUW35_02800;product=type 1 fimbrial protein subunit FimI;protein_id=WJG93612.1;transl_table=11 CP118132.1 Genbank gene 603116 603808 . + . ID=gene-PUW35_02805;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=PUW35_02805 CP118132.1 Protein Homology CDS 603116 603808 . + 0 ID=cds-WJG93613.1;Parent=gene-PUW35_02805;Dbxref=NCBI_GP:WJG93613.1;Name=WJG93613.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=PUW35_02805;product=type 1 fimbria chaperone FimC;protein_id=WJG93613.1;transl_table=11 CP118132.1 Genbank pseudogene 603839 606448 . + . ID=gene-PUW35_02810;Name=PUW35_02810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02810;pseudo=true CP118132.1 Protein Homology CDS 603839 606448 . + 0 ID=cds-PUW35_02810;Parent=gene-PUW35_02810;Note=frameshifted;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=PUW35_02810;product=fimbrial biogenesis usher protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 606463 607469 . + . ID=gene-PUW35_02815;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=pseudogene;locus_tag=PUW35_02815;pseudo=true CP118132.1 Protein Homology CDS 606463 607469 . + 0 ID=cds-PUW35_02815;Parent=gene-PUW35_02815;Note=frameshifted;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=PUW35_02815;product=type 1 fimbria D-mannose specific adhesin FimH;pseudo=true;transl_table=11 CP118132.1 Genbank gene 607479 607997 . + . ID=gene-PUW35_02820;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=PUW35_02820 CP118132.1 Protein Homology CDS 607479 607997 . + 0 ID=cds-WJG93614.1;Parent=gene-PUW35_02820;Dbxref=NCBI_GP:WJG93614.1;Name=WJG93614.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=PUW35_02820;product=fimbria assembly protein;protein_id=WJG93614.1;transl_table=11 CP118132.1 Genbank gene 608043 608675 . - . ID=gene-PUW35_02825;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=PUW35_02825 CP118132.1 Protein Homology CDS 608043 608675 . - 0 ID=cds-WJG93615.1;Parent=gene-PUW35_02825;Dbxref=NCBI_GP:WJG93615.1;Name=WJG93615.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=PUW35_02825;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WJG93615.1;transl_table=11 CP118132.1 Genbank pseudogene 609278 609996 . - . ID=gene-PUW35_02830;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=pseudogene;locus_tag=PUW35_02830;pseudo=true CP118132.1 Protein Homology CDS 609278 609996 . - 0 ID=cds-PUW35_02830;Parent=gene-PUW35_02830;Note=frameshifted;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=PUW35_02830;product=fimbria biosynthesis regulator FimY;pseudo=true;transl_table=11 CP118132.1 Genbank gene 610015 610326 . - . ID=gene-PUW35_02835;Name=PUW35_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02835 CP118132.1 Protein Homology CDS 610015 610326 . - 0 ID=cds-WJG93616.1;Parent=gene-PUW35_02835;Dbxref=NCBI_GP:WJG93616.1;Name=WJG93616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=PUW35_02835;product=diguanylate cyclase;protein_id=WJG93616.1;transl_table=11 CP118132.1 Genbank gene 610488 611084 . - . ID=gene-PUW35_02840;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=PUW35_02840 CP118132.1 Protein Homology CDS 610488 611084 . - 0 ID=cds-WJG93617.1;Parent=gene-PUW35_02840;Dbxref=NCBI_GP:WJG93617.1;Name=WJG93617.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=PUW35_02840;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WJG93617.1;transl_table=11 CP118132.1 Genbank gene 611339 611415 . + . ID=gene-PUW35_02845;Name=PUW35_02845;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_02845 CP118132.1 tRNAscan-SE tRNA 611339 611415 . + . ID=rna-PUW35_02845;Parent=gene-PUW35_02845;anticodon=(pos:611373..611375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_02845;product=tRNA-Arg CP118132.1 tRNAscan-SE exon 611339 611415 . + . ID=exon-PUW35_02845-1;Parent=rna-PUW35_02845;anticodon=(pos:611373..611375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_02845;product=tRNA-Arg CP118132.1 Genbank pseudogene 611442 611540 . - . ID=gene-PUW35_02850;Name=PUW35_02850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02850;pseudo=true CP118132.1 Protein Homology CDS 611442 611540 . - 0 ID=cds-PUW35_02850;Parent=gene-PUW35_02850;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012599930.1;locus_tag=PUW35_02850;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 611509 611902 . - . ID=gene-PUW35_02855;Name=PUW35_02855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02855;pseudo=true CP118132.1 Protein Homology CDS 611509 611902 . - 0 ID=cds-PUW35_02855;Parent=gene-PUW35_02855;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612139.1;locus_tag=PUW35_02855;product=IS3 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 611923 612176 . - . ID=gene-PUW35_02860;Name=PUW35_02860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02860;pseudo=true CP118132.1 Protein Homology CDS 611923 612176 . - 0 ID=cds-PUW35_02860;Parent=gene-PUW35_02860;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611921.1;locus_tag=PUW35_02860;product=transposase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 612563 614214 . - . ID=gene-PUW35_02865;Name=PUW35_02865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02865;pseudo=true CP118132.1 Protein Homology CDS 612563 614214 . - 0 ID=cds-PUW35_02865;Parent=gene-PUW35_02865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=PUW35_02865;product=DUF6056 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 614195 615121 . - . ID=gene-PUW35_02870;Name=PUW35_02870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02870;pseudo=true CP118132.1 Protein Homology CDS 614195 615121 . - 0 ID=cds-PUW35_02870;Parent=gene-PUW35_02870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=PUW35_02870;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 615118 615480 . - . ID=gene-PUW35_02875;Name=PUW35_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02875 CP118132.1 Protein Homology CDS 615118 615480 . - 0 ID=cds-WJG93618.1;Parent=gene-PUW35_02875;Dbxref=NCBI_GP:WJG93618.1;Name=WJG93618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=PUW35_02875;product=GtrA family protein;protein_id=WJG93618.1;transl_table=11 CP118132.1 Genbank gene 615903 616112 . - . ID=gene-PUW35_02880;Name=PUW35_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02880 CP118132.1 GeneMarkS-2+ CDS 615903 616112 . - 0 ID=cds-WJG93619.1;Parent=gene-PUW35_02880;Dbxref=NCBI_GP:WJG93619.1;Name=WJG93619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_02880;product=hypothetical protein;protein_id=WJG93619.1;transl_table=11 CP118132.1 Genbank pseudogene 616347 616721 . - . ID=gene-PUW35_02885;Name=PUW35_02885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02885;pseudo=true CP118132.1 Protein Homology CDS 616347 616721 . - 0 ID=cds-PUW35_02885;Parent=gene-PUW35_02885;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=PUW35_02885;product=ATP-binding protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 616731 616964 . + . ID=gene-PUW35_02890;Name=PUW35_02890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_02890;pseudo=true CP118132.1 Protein Homology CDS 616731 616964 . + 0 ID=cds-PUW35_02890;Parent=gene-PUW35_02890;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436621.1;locus_tag=PUW35_02890;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 617015 617869 . - . ID=gene-PUW35_02895;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=PUW35_02895 CP118132.1 Protein Homology CDS 617015 617869 . - 0 ID=cds-WJG93620.1;Parent=gene-PUW35_02895;Dbxref=NCBI_GP:WJG93620.1;Name=WJG93620.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=PUW35_02895;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WJG93620.1;transl_table=11 CP118132.1 Genbank gene 618085 619410 . + . ID=gene-PUW35_02900;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=PUW35_02900 CP118132.1 Protein Homology CDS 618085 619410 . + 0 ID=cds-WJG93621.1;Parent=gene-PUW35_02900;Dbxref=NCBI_GP:WJG93621.1;Name=WJG93621.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=PUW35_02900;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WJG93621.1;transl_table=11 CP118132.1 Genbank gene 619567 619803 . + . ID=gene-PUW35_02905;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=PUW35_02905 CP118132.1 Protein Homology CDS 619567 619803 . + 0 ID=cds-WJG93622.1;Parent=gene-PUW35_02905;Dbxref=NCBI_GP:WJG93622.1;Name=WJG93622.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=PUW35_02905;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WJG93622.1;transl_table=11 CP118132.1 Genbank gene 619816 620376 . + . ID=gene-PUW35_02910;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=PUW35_02910 CP118132.1 Protein Homology CDS 619816 620376 . + 0 ID=cds-WJG93623.1;Parent=gene-PUW35_02910;Dbxref=NCBI_GP:WJG93623.1;Name=WJG93623.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=PUW35_02910;product=reactive chlorine resistance membrane protein RclC;protein_id=WJG93623.1;transl_table=11 CP118132.1 Genbank gene 620543 621718 . - . ID=gene-PUW35_02915;Name=PUW35_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02915 CP118132.1 Protein Homology CDS 620543 621718 . - 0 ID=cds-WJG93624.1;Parent=gene-PUW35_02915;Dbxref=NCBI_GP:WJG93624.1;Name=WJG93624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=PUW35_02915;product=DnaJ family molecular chaperone;protein_id=WJG93624.1;transl_table=11 CP118132.1 Genbank gene 622044 623438 . + . ID=gene-PUW35_02920;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=PUW35_02920 CP118132.1 Protein Homology CDS 622044 623438 . + 0 ID=cds-WJG93625.1;Parent=gene-PUW35_02920;Dbxref=NCBI_GP:WJG93625.1;Name=WJG93625.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=PUW35_02920;product=phenylalanine transporter;protein_id=WJG93625.1;transl_table=11 CP118132.1 Genbank gene 623480 624727 . - . ID=gene-PUW35_02925;Name=PUW35_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02925 CP118132.1 Protein Homology CDS 623480 624727 . - 0 ID=cds-WJG93626.1;Parent=gene-PUW35_02925;Dbxref=NCBI_GP:WJG93626.1;Name=WJG93626.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=PUW35_02925;product=mechanosensitive ion channel;protein_id=WJG93626.1;transl_table=11 CP118132.1 Genbank gene 625038 627008 . + . ID=gene-PUW35_02930;Name=PUW35_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02930 CP118132.1 Protein Homology CDS 625038 627008 . + 0 ID=cds-WJG93627.1;Parent=gene-PUW35_02930;Dbxref=NCBI_GP:WJG93627.1;Name=WJG93627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=PUW35_02930;product=autotransporter domain-containing protein;protein_id=WJG93627.1;transl_table=11 CP118132.1 Genbank gene 627275 627928 . - . ID=gene-PUW35_02935;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=PUW35_02935 CP118132.1 Protein Homology CDS 627275 627928 . - 0 ID=cds-WJG93628.1;Parent=gene-PUW35_02935;Dbxref=NCBI_GP:WJG93628.1;Name=WJG93628.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=PUW35_02935;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WJG93628.1;transl_table=11 CP118132.1 Genbank gene 628025 628393 . - . ID=gene-PUW35_02940;Name=PUW35_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02940 CP118132.1 Protein Homology CDS 628025 628393 . - 0 ID=cds-WJG93629.1;Parent=gene-PUW35_02940;Dbxref=NCBI_GP:WJG93629.1;Name=WJG93629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=PUW35_02940;product=MmcQ/YjbR family DNA-binding protein;protein_id=WJG93629.1;transl_table=11 CP118132.1 Genbank gene 628393 628974 . - . ID=gene-PUW35_02945;Name=PUW35_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02945 CP118132.1 Protein Homology CDS 628393 628974 . - 0 ID=cds-WJG93630.1;Parent=gene-PUW35_02945;Dbxref=NCBI_GP:WJG93630.1;Name=WJG93630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=PUW35_02945;product=TetR/AcrR family transcriptional regulator;protein_id=WJG93630.1;transl_table=11 CP118132.1 Genbank gene 629263 629604 . + . ID=gene-PUW35_02950;Name=PUW35_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02950 CP118132.1 Protein Homology CDS 629263 629604 . + 0 ID=cds-WJG93631.1;Parent=gene-PUW35_02950;Dbxref=NCBI_GP:WJG93631.1;Name=WJG93631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=PUW35_02950;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WJG93631.1;transl_table=11 CP118132.1 Genbank gene 629610 629858 . - . ID=gene-PUW35_02955;Name=PUW35_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02955 CP118132.1 Protein Homology CDS 629610 629858 . - 0 ID=cds-WJG93632.1;Parent=gene-PUW35_02955;Dbxref=NCBI_GP:WJG93632.1;Name=WJG93632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=PUW35_02955;product=DUF1158 family protein;protein_id=WJG93632.1;transl_table=11 CP118132.1 Genbank gene 629925 631043 . - . ID=gene-PUW35_02960;Name=PUW35_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02960 CP118132.1 Protein Homology CDS 629925 631043 . - 0 ID=cds-WJG93633.1;Parent=gene-PUW35_02960;Dbxref=NCBI_GP:WJG93633.1;Name=WJG93633.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=PUW35_02960;product=YbdK family carboxylate-amine ligase;protein_id=WJG93633.1;transl_table=11 CP118132.1 Genbank gene 631055 631759 . - . ID=gene-PUW35_02965;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=PUW35_02965 CP118132.1 Protein Homology CDS 631055 631759 . - 0 ID=cds-WJG93634.1;Parent=gene-PUW35_02965;Dbxref=NCBI_GP:WJG93634.1;Name=WJG93634.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=PUW35_02965;product=enterobactin synthase subunit EntD;protein_id=WJG93634.1;transl_table=11 CP118132.1 Genbank gene 631805 634060 . - . ID=gene-PUW35_02970;Name=PUW35_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02970 CP118132.1 Protein Homology CDS 631805 634060 . - 0 ID=cds-WJG93635.1;Parent=gene-PUW35_02970;Dbxref=NCBI_GP:WJG93635.1;Name=WJG93635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=PUW35_02970;product=TonB-dependent siderophore receptor;protein_id=WJG93635.1;transl_table=11 CP118132.1 Genbank gene 634248 635462 . + . ID=gene-PUW35_02975;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=PUW35_02975 CP118132.1 Protein Homology CDS 634248 635462 . + 0 ID=cds-WJG93636.1;Parent=gene-PUW35_02975;Dbxref=NCBI_GP:WJG93636.1;Name=WJG93636.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=PUW35_02975;product=enterochelin esterase;protein_id=WJG93636.1;transl_table=11 CP118132.1 Genbank gene 635493 635711 . + . ID=gene-PUW35_02980;Name=PUW35_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_02980 CP118132.1 Protein Homology CDS 635493 635711 . + 0 ID=cds-WJG93637.1;Parent=gene-PUW35_02980;Dbxref=NCBI_GP:WJG93637.1;Name=WJG93637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=PUW35_02980;product=MbtH family protein;protein_id=WJG93637.1;transl_table=11 CP118132.1 Genbank gene 635708 639592 . + . ID=gene-PUW35_02985;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=PUW35_02985 CP118132.1 Protein Homology CDS 635708 639592 . + 0 ID=cds-WJG93638.1;Parent=gene-PUW35_02985;Dbxref=NCBI_GP:WJG93638.1;Name=WJG93638.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=PUW35_02985;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WJG93638.1;transl_table=11 CP118132.1 Genbank gene 639842 640978 . + . ID=gene-PUW35_02990;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=PUW35_02990 CP118132.1 Protein Homology CDS 639842 640978 . + 0 ID=cds-WJG93639.1;Parent=gene-PUW35_02990;Dbxref=NCBI_GP:WJG93639.1;Name=WJG93639.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=PUW35_02990;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WJG93639.1;transl_table=11 CP118132.1 Genbank gene 641031 641825 . - . ID=gene-PUW35_02995;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=PUW35_02995 CP118132.1 Protein Homology CDS 641031 641825 . - 0 ID=cds-WJG93640.1;Parent=gene-PUW35_02995;Dbxref=NCBI_GP:WJG93640.1;Name=WJG93640.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=PUW35_02995;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WJG93640.1;transl_table=11 CP118132.1 Genbank gene 641822 642811 . - . ID=gene-PUW35_03000;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=PUW35_03000 CP118132.1 Protein Homology CDS 641822 642811 . - 0 ID=cds-WJG95008.1;Parent=gene-PUW35_03000;Dbxref=NCBI_GP:WJG95008.1;Name=WJG95008.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=PUW35_03000;product=iron-enterobactin ABC transporter permease;protein_id=WJG95008.1;transl_table=11 CP118132.1 Genbank gene 642811 643818 . - . ID=gene-PUW35_03005;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=PUW35_03005 CP118132.1 Protein Homology CDS 642811 643818 . - 0 ID=cds-WJG93641.1;Parent=gene-PUW35_03005;Dbxref=NCBI_GP:WJG93641.1;Name=WJG93641.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=PUW35_03005;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WJG93641.1;transl_table=11 CP118132.1 Genbank pseudogene 643929 645172 . + . ID=gene-PUW35_03010;Name=entS;gbkey=Gene;gene=entS;gene_biotype=pseudogene;locus_tag=PUW35_03010;pseudo=true CP118132.1 Protein Homology CDS 643929 645172 . + 0 ID=cds-PUW35_03010;Parent=gene-PUW35_03010;Note=frameshifted;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=PUW35_03010;product=enterobactin transporter EntS;pseudo=true;transl_table=11 CP118132.1 Genbank gene 645235 646191 . - . ID=gene-PUW35_03015;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=PUW35_03015 CP118132.1 Protein Homology CDS 645235 646191 . - 0 ID=cds-WJG93642.1;Parent=gene-PUW35_03015;Dbxref=NCBI_GP:WJG93642.1;Name=WJG93642.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=PUW35_03015;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WJG93642.1;transl_table=11 CP118132.1 Genbank gene 646500 647675 . + . ID=gene-PUW35_03020;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=PUW35_03020 CP118132.1 Protein Homology CDS 646500 647675 . + 0 ID=cds-WJG93643.1;Parent=gene-PUW35_03020;Dbxref=NCBI_GP:WJG93643.1;Name=WJG93643.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=PUW35_03020;product=isochorismate synthase EntC;protein_id=WJG93643.1;transl_table=11 CP118132.1 Genbank gene 647685 649268 . + . ID=gene-PUW35_03025;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=PUW35_03025 CP118132.1 Protein Homology CDS 647685 649268 . + 0 ID=cds-WJG95009.1;Parent=gene-PUW35_03025;Dbxref=NCBI_GP:WJG95009.1;Name=WJG95009.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222466.1;locus_tag=PUW35_03025;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WJG95009.1;transl_table=11 CP118132.1 Genbank gene 649309 650166 . + . ID=gene-PUW35_03030;Name=PUW35_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03030 CP118132.1 Protein Homology CDS 649309 650166 . + 0 ID=cds-WJG93644.1;Parent=gene-PUW35_03030;Dbxref=NCBI_GP:WJG93644.1;Name=WJG93644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=PUW35_03030;product=isochorismatase;protein_id=WJG93644.1;transl_table=11 CP118132.1 Genbank gene 650166 650921 . + . ID=gene-PUW35_03035;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=PUW35_03035 CP118132.1 Protein Homology CDS 650166 650921 . + 0 ID=cds-WJG93645.1;Parent=gene-PUW35_03035;Dbxref=NCBI_GP:WJG93645.1;Name=WJG93645.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=PUW35_03035;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WJG93645.1;transl_table=11 CP118132.1 Genbank gene 650924 651337 . + . ID=gene-PUW35_03040;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=PUW35_03040 CP118132.1 Protein Homology CDS 650924 651337 . + 0 ID=cds-WJG93646.1;Parent=gene-PUW35_03040;Dbxref=NCBI_GP:WJG93646.1;Name=WJG93646.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=PUW35_03040;product=proofreading thioesterase EntH;protein_id=WJG93646.1;transl_table=11 CP118132.1 Genbank gene 651519 653624 . + . ID=gene-PUW35_03045;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=PUW35_03045 CP118132.1 Protein Homology CDS 651519 653624 . + 0 ID=cds-WJG93647.1;Parent=gene-PUW35_03045;Dbxref=NCBI_GP:WJG93647.1;Name=WJG93647.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=PUW35_03045;product=pyruvate/proton symporter CstA;protein_id=WJG93647.1;transl_table=11 CP118132.1 Genbank gene 653688 653885 . + . ID=gene-PUW35_03050;Name=PUW35_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03050 CP118132.1 Protein Homology CDS 653688 653885 . + 0 ID=cds-WJG93648.1;Parent=gene-PUW35_03050;Dbxref=NCBI_GP:WJG93648.1;Name=WJG93648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=PUW35_03050;product=YbdD/YjiX family protein;protein_id=WJG93648.1;transl_table=11 CP118132.1 Genbank gene 653921 655009 . - . ID=gene-PUW35_03055;Name=PUW35_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03055 CP118132.1 Protein Homology CDS 653921 655009 . - 0 ID=cds-WJG93649.1;Parent=gene-PUW35_03055;Dbxref=NCBI_GP:WJG93649.1;Name=WJG93649.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=PUW35_03055;product=oxidoreductase;protein_id=WJG93649.1;transl_table=11 CP118132.1 Genbank gene 655136 656296 . + . ID=gene-PUW35_03060;Name=PUW35_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03060 CP118132.1 Protein Homology CDS 655136 656296 . + 0 ID=cds-WJG95010.1;Parent=gene-PUW35_03060;Dbxref=NCBI_GP:WJG95010.1;Name=WJG95010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=PUW35_03060;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WJG95010.1;transl_table=11 CP118132.1 Genbank gene 656297 656914 . - . ID=gene-PUW35_03065;Name=PUW35_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03065 CP118132.1 Protein Homology CDS 656297 656914 . - 0 ID=cds-WJG93650.1;Parent=gene-PUW35_03065;Dbxref=NCBI_GP:WJG93650.1;Name=WJG93650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=PUW35_03065;product=ParB/RepB/Spo0J family partition protein;protein_id=WJG93650.1;transl_table=11 CP118132.1 Genbank gene 656887 658122 . - . ID=gene-PUW35_03070;Name=PUW35_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03070 CP118132.1 Protein Homology CDS 656887 658122 . - 0 ID=cds-WJG93651.1;Parent=gene-PUW35_03070;Dbxref=NCBI_GP:WJG93651.1;Name=WJG93651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=PUW35_03070;product=phosphoadenosine phosphosulfate reductase;protein_id=WJG93651.1;transl_table=11 CP118132.1 Genbank gene 658288 659190 . - . ID=gene-PUW35_03075;Name=PUW35_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03075 CP118132.1 Protein Homology CDS 658288 659190 . - 0 ID=cds-WJG93652.1;Parent=gene-PUW35_03075;Dbxref=NCBI_GP:WJG93652.1;Name=WJG93652.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=PUW35_03075;product=LysR family transcriptional regulator;protein_id=WJG93652.1;transl_table=11 CP118132.1 Genbank gene 659507 660253 . - . ID=gene-PUW35_03080;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=PUW35_03080 CP118132.1 Protein Homology CDS 659507 660253 . - 0 ID=cds-WJG93653.1;Parent=gene-PUW35_03080;Dbxref=NCBI_GP:WJG93653.1;Name=WJG93653.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=PUW35_03080;product=thiol:disulfide interchange protein DsbG;protein_id=WJG93653.1;transl_table=11 CP118132.1 Genbank gene 660694 661257 . + . ID=gene-PUW35_03085;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=PUW35_03085 CP118132.1 Protein Homology CDS 660694 661257 . + 0 ID=cds-WJG93654.1;Parent=gene-PUW35_03085;Dbxref=NCBI_GP:WJG93654.1;Name=WJG93654.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=PUW35_03085;product=alkyl hydroperoxide reductase subunit C;protein_id=WJG93654.1;transl_table=11 CP118132.1 Genbank gene 661499 663064 . + . ID=gene-PUW35_03090;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=PUW35_03090 CP118132.1 Protein Homology CDS 661499 663064 . + 0 ID=cds-WJG93655.1;Parent=gene-PUW35_03090;Dbxref=NCBI_GP:WJG93655.1;Name=WJG93655.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=PUW35_03090;product=alkyl hydroperoxide reductase subunit F;protein_id=WJG93655.1;transl_table=11 CP118132.1 Genbank gene 663397 663957 . + . ID=gene-PUW35_03095;Name=PUW35_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03095 CP118132.1 Protein Homology CDS 663397 663957 . + 0 ID=cds-WJG93656.1;Parent=gene-PUW35_03095;Dbxref=NCBI_GP:WJG93656.1;Name=WJG93656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=PUW35_03095;product=molecular chaperone;protein_id=WJG93656.1;transl_table=11 CP118132.1 Genbank gene 663950 666229 . + . ID=gene-PUW35_03100;Name=PUW35_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03100 CP118132.1 Protein Homology CDS 663950 666229 . + 0 ID=cds-WJG93657.1;Parent=gene-PUW35_03100;Dbxref=NCBI_GP:WJG93657.1;Name=WJG93657.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=PUW35_03100;product=molybdopterin-dependent oxidoreductase;protein_id=WJG93657.1;transl_table=11 CP118132.1 Genbank gene 666226 666783 . + . ID=gene-PUW35_03105;Name=PUW35_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03105 CP118132.1 Protein Homology CDS 666226 666783 . + 0 ID=cds-WJG93658.1;Parent=gene-PUW35_03105;Dbxref=NCBI_GP:WJG93658.1;Name=WJG93658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=PUW35_03105;product=4Fe-4S dicluster domain-containing protein;protein_id=WJG93658.1;transl_table=11 CP118132.1 Genbank gene 666783 667550 . + . ID=gene-PUW35_03110;Name=PUW35_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03110 CP118132.1 Protein Homology CDS 666783 667550 . + 0 ID=cds-WJG93659.1;Parent=gene-PUW35_03110;Dbxref=NCBI_GP:WJG93659.1;Name=WJG93659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=PUW35_03110;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WJG93659.1;transl_table=11 CP118132.1 Genbank gene 667618 668046 . - . ID=gene-PUW35_03115;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=PUW35_03115 CP118132.1 Protein Homology CDS 667618 668046 . - 0 ID=cds-WJG93660.1;Parent=gene-PUW35_03115;Dbxref=NCBI_GP:WJG93660.1;Name=WJG93660.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=PUW35_03115;product=universal stress protein UspG;protein_id=WJG93660.1;transl_table=11 CP118132.1 Genbank gene 668269 669516 . + . ID=gene-PUW35_03120;Name=PUW35_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03120 CP118132.1 Protein Homology CDS 668269 669516 . + 0 ID=cds-WJG93661.1;Parent=gene-PUW35_03120;Dbxref=NCBI_GP:WJG93661.1;Name=WJG93661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=PUW35_03120;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WJG93661.1;transl_table=11 CP118132.1 Genbank gene 669599 670009 . - . ID=gene-PUW35_03125;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=PUW35_03125 CP118132.1 Protein Homology CDS 669599 670009 . - 0 ID=cds-WJG93662.1;Parent=gene-PUW35_03125;Dbxref=NCBI_GP:WJG93662.1;Name=WJG93662.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=PUW35_03125;product=nucleoside diphosphate kinase regulator;protein_id=WJG93662.1;transl_table=11 CP118132.1 Genbank gene 670244 671050 . - . ID=gene-PUW35_03130;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=PUW35_03130 CP118132.1 Protein Homology CDS 670244 671050 . - 0 ID=cds-WJG93663.1;Parent=gene-PUW35_03130;Dbxref=NCBI_GP:WJG93663.1;Name=WJG93663.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=PUW35_03130;product=ribonuclease I;protein_id=WJG93663.1;transl_table=11 CP118132.1 Genbank pseudogene 671160 672622 . - . ID=gene-PUW35_03135;Name=citT;gbkey=Gene;gene=citT;gene_biotype=pseudogene;locus_tag=PUW35_03135;pseudo=true CP118132.1 Protein Homology CDS 671160 672622 . - 0 ID=cds-PUW35_03135;Parent=gene-PUW35_03135;Note=frameshifted;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=PUW35_03135;product=citrate/succinate antiporter CitT;pseudo=true;transl_table=11 CP118132.1 Genbank gene 672681 673556 . - . ID=gene-PUW35_03140;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PUW35_03140 CP118132.1 Protein Homology CDS 672681 673556 . - 0 ID=cds-WJG93664.1;Parent=gene-PUW35_03140;Dbxref=NCBI_GP:WJG93664.1;Name=WJG93664.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=PUW35_03140;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WJG93664.1;transl_table=11 CP118132.1 Genbank gene 673528 674079 . - . ID=gene-PUW35_03145;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PUW35_03145 CP118132.1 Protein Homology CDS 673528 674079 . - 0 ID=cds-WJG93665.1;Parent=gene-PUW35_03145;Dbxref=NCBI_GP:WJG93665.1;Name=WJG93665.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=PUW35_03145;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WJG93665.1;transl_table=11 CP118132.1 Genbank gene 674083 675612 . - . ID=gene-PUW35_03150;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PUW35_03150 CP118132.1 Protein Homology CDS 674083 675612 . - 0 ID=cds-WJG93666.1;Parent=gene-PUW35_03150;Dbxref=NCBI_GP:WJG93666.1;Name=WJG93666.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=PUW35_03150;product=citrate lyase subunit alpha;protein_id=WJG93666.1;transl_table=11 CP118132.1 Genbank gene 675622 676530 . - . ID=gene-PUW35_03155;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PUW35_03155 CP118132.1 Protein Homology CDS 675622 676530 . - 0 ID=cds-WJG93667.1;Parent=gene-PUW35_03155;Dbxref=NCBI_GP:WJG93667.1;Name=WJG93667.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=PUW35_03155;product=citrate (pro-3S)-lyase subunit beta;protein_id=WJG93667.1;transl_table=11 CP118132.1 Genbank gene 676527 676823 . - . ID=gene-PUW35_03160;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PUW35_03160 CP118132.1 Protein Homology CDS 676527 676823 . - 0 ID=cds-WJG93668.1;Parent=gene-PUW35_03160;Dbxref=NCBI_GP:WJG93668.1;Name=WJG93668.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=PUW35_03160;product=citrate lyase acyl carrier protein;protein_id=WJG93668.1;transl_table=11 CP118132.1 Genbank gene 676820 677896 . - . ID=gene-PUW35_03165;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PUW35_03165 CP118132.1 Protein Homology CDS 676820 677896 . - 0 ID=cds-WJG93669.1;Parent=gene-PUW35_03165;Dbxref=NCBI_GP:WJG93669.1;Name=WJG93669.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=PUW35_03165;product=[citrate (pro-3S)-lyase] ligase;protein_id=WJG93669.1;transl_table=11 CP118132.1 Genbank pseudogene 678281 679941 . + . ID=gene-PUW35_03170;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=pseudogene;locus_tag=PUW35_03170;pseudo=true CP118132.1 Protein Homology CDS 678281 679941 . + 0 ID=cds-PUW35_03170;Parent=gene-PUW35_03170;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=PUW35_03170;product=sensor histidine kinase DpiB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 679910 680590 . + . ID=gene-PUW35_03175;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=PUW35_03175 CP118132.1 Protein Homology CDS 679910 680590 . + 0 ID=cds-WJG93670.1;Parent=gene-PUW35_03175;Dbxref=NCBI_GP:WJG93670.1;Name=WJG93670.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=PUW35_03175;product=two-component response regulator DpiA;protein_id=WJG93670.1;transl_table=11 CP118132.1 Genbank gene 680644 682029 . - . ID=gene-PUW35_03180;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=PUW35_03180 CP118132.1 Protein Homology CDS 680644 682029 . - 0 ID=cds-WJG93671.1;Parent=gene-PUW35_03180;Dbxref=NCBI_GP:WJG93671.1;Name=WJG93671.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=PUW35_03180;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WJG93671.1;transl_table=11 CP118132.1 Genbank gene 682408 682980 . + . ID=gene-PUW35_03185;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=PUW35_03185 CP118132.1 Protein Homology CDS 682408 682980 . + 0 ID=cds-WJG95011.1;Parent=gene-PUW35_03185;Dbxref=NCBI_GP:WJG95011.1;Name=WJG95011.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=PUW35_03185;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WJG95011.1;transl_table=11 CP118132.1 Genbank gene 683168 683377 . + . ID=gene-PUW35_03190;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PUW35_03190 CP118132.1 Protein Homology CDS 683168 683377 . + 0 ID=cds-WJG93672.1;Parent=gene-PUW35_03190;Dbxref=NCBI_GP:WJG93672.1;Name=WJG93672.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=PUW35_03190;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WJG93672.1;transl_table=11 CP118132.1 Genbank gene 683435 683818 . - . ID=gene-PUW35_03195;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=PUW35_03195 CP118132.1 Protein Homology CDS 683435 683818 . - 0 ID=cds-WJG93673.1;Parent=gene-PUW35_03195;Dbxref=NCBI_GP:WJG93673.1;Name=WJG93673.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=PUW35_03195;product=fluoride efflux transporter CrcB;protein_id=WJG93673.1;transl_table=11 CP118132.1 Genbank gene 683909 684697 . + . ID=gene-PUW35_03200;Name=PUW35_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03200 CP118132.1 Protein Homology CDS 683909 684697 . + 0 ID=cds-WJG93674.1;Parent=gene-PUW35_03200;Dbxref=NCBI_GP:WJG93674.1;Name=WJG93674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=PUW35_03200;product=deaminated glutathione amidase;protein_id=WJG93674.1;transl_table=11 CP118132.1 Genbank gene 684826 685029 . + . ID=gene-PUW35_03205;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=PUW35_03205 CP118132.1 Protein Homology CDS 684826 685029 . + 0 ID=cds-WJG93675.1;Parent=gene-PUW35_03205;Dbxref=NCBI_GP:WJG93675.1;Name=WJG93675.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=PUW35_03205;product=twin-arginine translocase subunit TatE;protein_id=WJG93675.1;transl_table=11 CP118132.1 Genbank gene 685114 686079 . - . ID=gene-PUW35_03210;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=PUW35_03210 CP118132.1 Protein Homology CDS 685114 686079 . - 0 ID=cds-WJG93676.1;Parent=gene-PUW35_03210;Dbxref=NCBI_GP:WJG93676.1;Name=WJG93676.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=PUW35_03210;product=lipoyl synthase;protein_id=WJG93676.1;transl_table=11 CP118132.1 Genbank gene 686285 687238 . - . ID=gene-PUW35_03215;Name=PUW35_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03215 CP118132.1 Protein Homology CDS 686285 687238 . - 0 ID=cds-WJG93677.1;Parent=gene-PUW35_03215;Dbxref=NCBI_GP:WJG93677.1;Name=WJG93677.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=PUW35_03215;product=YbeF family transcriptional regulator;protein_id=WJG93677.1;transl_table=11 CP118132.1 Genbank gene 687540 688181 . - . ID=gene-PUW35_03220;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=PUW35_03220 CP118132.1 Protein Homology CDS 687540 688181 . - 0 ID=cds-WJG93678.1;Parent=gene-PUW35_03220;Dbxref=NCBI_GP:WJG93678.1;Name=WJG93678.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=PUW35_03220;product=lipoyl(octanoyl) transferase LipB;protein_id=WJG93678.1;transl_table=11 CP118132.1 Genbank gene 688281 688544 . - . ID=gene-PUW35_03225;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=PUW35_03225 CP118132.1 Protein Homology CDS 688281 688544 . - 0 ID=cds-WJG93679.1;Parent=gene-PUW35_03225;Dbxref=NCBI_GP:WJG93679.1;Name=WJG93679.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=PUW35_03225;product=DUF493 family protein YbeD;protein_id=WJG93679.1;transl_table=11 CP118132.1 Genbank pseudogene 688651 689861 . - . ID=gene-PUW35_03230;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=pseudogene;locus_tag=PUW35_03230;pseudo=true CP118132.1 Protein Homology CDS 688651 689861 . - 0 ID=cds-PUW35_03230;Parent=gene-PUW35_03230;Note=frameshifted;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=PUW35_03230;product=D-alanyl-D-alanine carboxypeptidase DacA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 690001 691134 . - . ID=gene-PUW35_03235;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=PUW35_03235 CP118132.1 Protein Homology CDS 690001 691134 . - 0 ID=cds-WJG93680.1;Parent=gene-PUW35_03235;Dbxref=NCBI_GP:WJG93680.1;Name=WJG93680.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=PUW35_03235;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WJG93680.1;transl_table=11 CP118132.1 Genbank gene 691145 692257 . - . ID=gene-PUW35_03240;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=PUW35_03240 CP118132.1 Protein Homology CDS 691145 692257 . - 0 ID=cds-WJG93681.1;Parent=gene-PUW35_03240;Dbxref=NCBI_GP:WJG93681.1;Name=WJG93681.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=PUW35_03240;product=peptidoglycan glycosyltransferase MrdB;protein_id=WJG93681.1;transl_table=11 CP118132.1 Genbank gene 692260 694161 . - . ID=gene-PUW35_03245;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=PUW35_03245 CP118132.1 Protein Homology CDS 692260 694161 . - 0 ID=cds-WJG93682.1;Parent=gene-PUW35_03245;Dbxref=NCBI_GP:WJG93682.1;Name=WJG93682.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=PUW35_03245;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WJG93682.1;transl_table=11 CP118132.1 Genbank gene 694192 694659 . - . ID=gene-PUW35_03250;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=PUW35_03250 CP118132.1 Protein Homology CDS 694192 694659 . - 0 ID=cds-WJG93683.1;Parent=gene-PUW35_03250;Dbxref=NCBI_GP:WJG93683.1;Name=WJG93683.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=PUW35_03250;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WJG93683.1;transl_table=11 CP118132.1 Genbank gene 694663 694980 . - . ID=gene-PUW35_03255;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=PUW35_03255 CP118132.1 Protein Homology CDS 694663 694980 . - 0 ID=cds-WJG93684.1;Parent=gene-PUW35_03255;Dbxref=NCBI_GP:WJG93684.1;Name=WJG93684.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=PUW35_03255;product=ribosome silencing factor;protein_id=WJG93684.1;transl_table=11 CP118132.1 Genbank gene 695309 695917 . - . ID=gene-PUW35_03260;Name=PUW35_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03260 CP118132.1 Protein Homology CDS 695309 695917 . - 0 ID=cds-WJG93685.1;Parent=gene-PUW35_03260;Dbxref=NCBI_GP:WJG93685.1;Name=WJG93685.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=PUW35_03260;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WJG93685.1;transl_table=11 CP118132.1 Genbank pseudogene 696014 697108 . + . ID=gene-PUW35_03265;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=pseudogene;locus_tag=PUW35_03265;pseudo=true CP118132.1 Protein Homology CDS 696014 697108 . + 0 ID=cds-PUW35_03265;Parent=gene-PUW35_03265;Note=internal stop;Ontology_term=GO:0009236,GO:0048472,GO:0005737;gbkey=CDS;gene=cobD;go_component=cytoplasm|0005737||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=PUW35_03265;product=threonine-phosphate decarboxylase CobD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 697083 697724 . - . ID=gene-PUW35_03270;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=PUW35_03270 CP118132.1 Protein Homology CDS 697083 697724 . - 0 ID=cds-WJG93686.1;Parent=gene-PUW35_03270;Dbxref=NCBI_GP:WJG93686.1;Name=WJG93686.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=PUW35_03270;product=nicotinate-nucleotide adenylyltransferase;protein_id=WJG93686.1;transl_table=11 CP118132.1 Genbank gene 697726 698757 . - . ID=gene-PUW35_03275;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=PUW35_03275 CP118132.1 Protein Homology CDS 697726 698757 . - 0 ID=cds-WJG93687.1;Parent=gene-PUW35_03275;Dbxref=NCBI_GP:WJG93687.1;Name=WJG93687.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=PUW35_03275;product=DNA polymerase III subunit delta;protein_id=WJG93687.1;transl_table=11 CP118132.1 Genbank gene 698757 699347 . - . ID=gene-PUW35_03280;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=PUW35_03280 CP118132.1 Protein Homology CDS 698757 699347 . - 0 ID=cds-WJG93688.1;Parent=gene-PUW35_03280;Dbxref=NCBI_GP:WJG93688.1;Name=WJG93688.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=PUW35_03280;product=LPS assembly lipoprotein LptE;protein_id=WJG93688.1;transl_table=11 CP118132.1 Genbank gene 699362 701944 . - . ID=gene-PUW35_03285;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=PUW35_03285 CP118132.1 Protein Homology CDS 699362 701944 . - 0 ID=cds-WJG93689.1;Parent=gene-PUW35_03285;Dbxref=NCBI_GP:WJG93689.1;Name=WJG93689.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=PUW35_03285;product=leucine--tRNA ligase;protein_id=WJG93689.1;transl_table=11 CP118132.1 Genbank pseudogene 702181 702521 . + . ID=gene-PUW35_03290;Name=PUW35_03290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_03290;pseudo=true CP118132.1 Protein Homology CDS 702181 702521 . + 0 ID=cds-PUW35_03290;Parent=gene-PUW35_03290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=PUW35_03290;product=UxaA family hydrolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 702538 703710 . + . ID=gene-PUW35_03295;Name=PUW35_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03295 CP118132.1 Protein Homology CDS 702538 703710 . + 0 ID=cds-WJG93690.1;Parent=gene-PUW35_03295;Dbxref=NCBI_GP:WJG93690.1;Name=WJG93690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=PUW35_03295;product=UxaA family hydrolase;protein_id=WJG93690.1;transl_table=11 CP118132.1 Genbank gene 703760 704713 . + . ID=gene-PUW35_03300;Name=PUW35_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03300 CP118132.1 Protein Homology CDS 703760 704713 . + 0 ID=cds-WJG93691.1;Parent=gene-PUW35_03300;Dbxref=NCBI_GP:WJG93691.1;Name=WJG93691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=PUW35_03300;product=2-keto-3-deoxygluconate permease 2;protein_id=WJG93691.1;transl_table=11 CP118132.1 Genbank pseudogene 704781 706709 . + . ID=gene-PUW35_03305;Name=PUW35_03305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_03305;pseudo=true CP118132.1 Protein Homology CDS 704781 706709 . + 0 ID=cds-PUW35_03305;Parent=gene-PUW35_03305;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=PUW35_03305;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 706802 707275 . + . ID=gene-PUW35_03310;Name=PUW35_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03310 CP118132.1 Protein Homology CDS 706802 707275 . + 0 ID=cds-WJG93692.1;Parent=gene-PUW35_03310;Dbxref=NCBI_GP:WJG93692.1;Name=WJG93692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=PUW35_03310;product=zinc ribbon-containing protein;protein_id=WJG93692.1;transl_table=11 CP118132.1 Genbank gene 707314 708249 . - . ID=gene-PUW35_03315;Name=PUW35_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03315 CP118132.1 Protein Homology CDS 707314 708249 . - 0 ID=cds-WJG95012.1;Parent=gene-PUW35_03315;Dbxref=NCBI_GP:WJG95012.1;Name=WJG95012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=PUW35_03315;product=tetratricopeptide repeat protein;protein_id=WJG95012.1;transl_table=11 CP118132.1 Genbank gene 708434 709141 . + . ID=gene-PUW35_03320;Name=PUW35_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03320 CP118132.1 Protein Homology CDS 708434 709141 . + 0 ID=cds-WJG93693.1;Parent=gene-PUW35_03320;Dbxref=NCBI_GP:WJG93693.1;Name=WJG93693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=PUW35_03320;product=DUF1266 domain-containing protein;protein_id=WJG93693.1;transl_table=11 CP118132.1 Genbank gene 709138 710571 . + . ID=gene-PUW35_03325;Name=PUW35_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03325 CP118132.1 Protein Homology CDS 709138 710571 . + 0 ID=cds-WJG93694.1;Parent=gene-PUW35_03325;Dbxref=NCBI_GP:WJG93694.1;Name=WJG93694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=PUW35_03325;product=J domain-containing protein;protein_id=WJG93694.1;transl_table=11 CP118132.1 Genbank gene 710583 711278 . + . ID=gene-PUW35_03330;Name=PUW35_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03330 CP118132.1 Protein Homology CDS 710583 711278 . + 0 ID=cds-WJG93695.1;Parent=gene-PUW35_03330;Dbxref=NCBI_GP:WJG93695.1;Name=WJG93695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=PUW35_03330;product=DUF1266 domain-containing protein;protein_id=WJG93695.1;transl_table=11 CP118132.1 Genbank gene 711275 712747 . + . ID=gene-PUW35_03335;Name=PUW35_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03335 CP118132.1 Protein Homology CDS 711275 712747 . + 0 ID=cds-WJG93696.1;Parent=gene-PUW35_03335;Dbxref=NCBI_GP:WJG93696.1;Name=WJG93696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=PUW35_03335;product=J domain-containing protein;protein_id=WJG93696.1;transl_table=11 CP118132.1 Genbank gene 712769 714448 . - . ID=gene-PUW35_03340;Name=PUW35_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03340 CP118132.1 Protein Homology CDS 712769 714448 . - 0 ID=cds-WJG93697.1;Parent=gene-PUW35_03340;Dbxref=NCBI_GP:WJG93697.1;Name=WJG93697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=PUW35_03340;product=molecular chaperone HscC;protein_id=WJG93697.1;transl_table=11 CP118132.1 Genbank gene 714524 715762 . - . ID=gene-PUW35_03345;Name=PUW35_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03345 CP118132.1 Protein Homology CDS 714524 715762 . - 0 ID=cds-WJG93698.1;Parent=gene-PUW35_03345;Dbxref=NCBI_GP:WJG93698.1;Name=WJG93698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=PUW35_03345;product=hypothetical protein;protein_id=WJG93698.1;transl_table=11 CP118132.1 Genbank gene 715794 716729 . - . ID=gene-PUW35_03350;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=PUW35_03350 CP118132.1 Protein Homology CDS 715794 716729 . - 0 ID=cds-WJG93699.1;Parent=gene-PUW35_03350;Dbxref=NCBI_GP:WJG93699.1;Name=WJG93699.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=PUW35_03350;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WJG93699.1;transl_table=11 CP118132.1 Genbank gene 716846 717571 . - . ID=gene-PUW35_03355;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=PUW35_03355 CP118132.1 Protein Homology CDS 716846 717571 . - 0 ID=cds-WJG93700.1;Parent=gene-PUW35_03355;Dbxref=NCBI_GP:WJG93700.1;Name=WJG93700.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=PUW35_03355;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WJG93700.1;transl_table=11 CP118132.1 Genbank pseudogene 717571 718244 . - . ID=gene-PUW35_03360;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=pseudogene;locus_tag=PUW35_03360;pseudo=true CP118132.1 Protein Homology CDS 717571 718244 . - 0 ID=cds-PUW35_03360;Parent=gene-PUW35_03360;Note=frameshifted;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=PUW35_03360;product=glutamate/aspartate ABC transporter permease GltK;pseudo=true;transl_table=11 CP118132.1 Genbank gene 718244 718984 . - . ID=gene-PUW35_03365;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=PUW35_03365 CP118132.1 Protein Homology CDS 718244 718984 . - 0 ID=cds-WJG93701.1;Parent=gene-PUW35_03365;Dbxref=NCBI_GP:WJG93701.1;Name=WJG93701.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=PUW35_03365;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WJG93701.1;transl_table=11 CP118132.1 Genbank pseudogene 719144 720052 . - . ID=gene-PUW35_03370;Name=PUW35_03370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_03370;pseudo=true CP118132.1 Protein Homology CDS 719144 720052 . - 0 ID=cds-PUW35_03370;Parent=gene-PUW35_03370;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=PUW35_03370;product=amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 720407 721945 . - . ID=gene-PUW35_03375;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=PUW35_03375 CP118132.1 Protein Homology CDS 720407 721945 . - 0 ID=cds-WJG95013.1;Parent=gene-PUW35_03375;Dbxref=NCBI_GP:WJG95013.1;Name=WJG95013.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=PUW35_03375;product=apolipoprotein N-acyltransferase;protein_id=WJG95013.1;transl_table=11 CP118132.1 Genbank gene 721965 722843 . - . ID=gene-PUW35_03380;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=PUW35_03380 CP118132.1 Protein Homology CDS 721965 722843 . - 0 ID=cds-WJG93702.1;Parent=gene-PUW35_03380;Dbxref=NCBI_GP:WJG93702.1;Name=WJG93702.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=PUW35_03380;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WJG93702.1;transl_table=11 CP118132.1 Genbank gene 723001 723474 . - . ID=gene-PUW35_03385;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=PUW35_03385 CP118132.1 Protein Homology CDS 723001 723474 . - 0 ID=cds-WJG93703.1;Parent=gene-PUW35_03385;Dbxref=NCBI_GP:WJG93703.1;Name=WJG93703.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=PUW35_03385;product=rRNA maturation RNase YbeY;protein_id=WJG93703.1;transl_table=11 CP118132.1 Genbank gene 723471 724517 . - . ID=gene-PUW35_03390;Name=PUW35_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03390 CP118132.1 Protein Homology CDS 723471 724517 . - 0 ID=cds-WJG93704.1;Parent=gene-PUW35_03390;Dbxref=NCBI_GP:WJG93704.1;Name=WJG93704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=PUW35_03390;product=PhoH family protein;protein_id=WJG93704.1;transl_table=11 CP118132.1 Genbank gene 724722 726146 . - . ID=gene-PUW35_03395;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=PUW35_03395 CP118132.1 Protein Homology CDS 724722 726146 . - 0 ID=cds-WJG93705.1;Parent=gene-PUW35_03395;Dbxref=NCBI_GP:WJG93705.1;Name=WJG93705.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=PUW35_03395;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WJG93705.1;transl_table=11 CP118132.1 Genbank gene 726290 727465 . + . ID=gene-PUW35_03400;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=PUW35_03400 CP118132.1 Protein Homology CDS 726290 727465 . + 0 ID=cds-WJG93706.1;Parent=gene-PUW35_03400;Dbxref=NCBI_GP:WJG93706.1;Name=WJG93706.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=PUW35_03400;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WJG93706.1;transl_table=11 CP118132.1 Genbank gene 727532 728107 . - . ID=gene-PUW35_03405;Name=PUW35_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03405 CP118132.1 Protein Homology CDS 727532 728107 . - 0 ID=cds-WJG93707.1;Parent=gene-PUW35_03405;Dbxref=NCBI_GP:WJG93707.1;Name=WJG93707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=PUW35_03405;product=hypothetical protein;protein_id=WJG93707.1;transl_table=11 CP118132.1 Genbank gene 728243 728317 . - . ID=gene-PUW35_03410;Name=PUW35_03410;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_03410 CP118132.1 tRNAscan-SE tRNA 728243 728317 . - . ID=rna-PUW35_03410;Parent=gene-PUW35_03410;anticodon=(pos:complement(728283..728285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03410;product=tRNA-Gln CP118132.1 tRNAscan-SE exon 728243 728317 . - . ID=exon-PUW35_03410-1;Parent=rna-PUW35_03410;anticodon=(pos:complement(728283..728285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03410;product=tRNA-Gln CP118132.1 Genbank gene 728361 728435 . - . ID=gene-PUW35_03415;Name=PUW35_03415;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_03415 CP118132.1 tRNAscan-SE tRNA 728361 728435 . - . ID=rna-PUW35_03415;Parent=gene-PUW35_03415;anticodon=(pos:complement(728401..728403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03415;product=tRNA-Gln CP118132.1 tRNAscan-SE exon 728361 728435 . - . ID=exon-PUW35_03415-1;Parent=rna-PUW35_03415;anticodon=(pos:complement(728401..728403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03415;product=tRNA-Gln CP118132.1 Genbank gene 728484 728557 . - . ID=gene-PUW35_03420;Name=PUW35_03420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_03420 CP118132.1 tRNAscan-SE tRNA 728484 728557 . - . ID=rna-PUW35_03420;Parent=gene-PUW35_03420;anticodon=(pos:complement(728521..728523));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03420;product=tRNA-Met CP118132.1 tRNAscan-SE exon 728484 728557 . - . ID=exon-PUW35_03420-1;Parent=rna-PUW35_03420;anticodon=(pos:complement(728521..728523));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03420;product=tRNA-Met CP118132.1 Genbank gene 728573 728647 . - . ID=gene-PUW35_03425;Name=PUW35_03425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_03425 CP118132.1 tRNAscan-SE tRNA 728573 728647 . - . ID=rna-PUW35_03425;Parent=gene-PUW35_03425;anticodon=(pos:complement(728613..728615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03425;product=tRNA-Gln CP118132.1 tRNAscan-SE exon 728573 728647 . - . ID=exon-PUW35_03425-1;Parent=rna-PUW35_03425;anticodon=(pos:complement(728613..728615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03425;product=tRNA-Gln CP118132.1 Genbank gene 728671 728755 . - . ID=gene-PUW35_03430;Name=PUW35_03430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_03430 CP118132.1 tRNAscan-SE tRNA 728671 728755 . - . ID=rna-PUW35_03430;Parent=gene-PUW35_03430;anticodon=(pos:complement(728719..728721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03430;product=tRNA-Leu CP118132.1 tRNAscan-SE exon 728671 728755 . - . ID=exon-PUW35_03430-1;Parent=rna-PUW35_03430;anticodon=(pos:complement(728719..728721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03430;product=tRNA-Leu CP118132.1 Genbank gene 728764 728840 . - . ID=gene-PUW35_03435;Name=PUW35_03435;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_03435 CP118132.1 tRNAscan-SE tRNA 728764 728840 . - . ID=rna-PUW35_03435;Parent=gene-PUW35_03435;anticodon=(pos:complement(728804..728806));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03435;product=tRNA-Met CP118132.1 tRNAscan-SE exon 728764 728840 . - . ID=exon-PUW35_03435-1;Parent=rna-PUW35_03435;anticodon=(pos:complement(728804..728806));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03435;product=tRNA-Met CP118132.1 Genbank gene 729062 730726 . - . ID=gene-PUW35_03440;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=PUW35_03440 CP118132.1 Protein Homology CDS 729062 730726 . - 0 ID=cds-WJG93708.1;Parent=gene-PUW35_03440;Dbxref=NCBI_GP:WJG93708.1;Name=WJG93708.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=PUW35_03440;product=asparagine synthase B;protein_id=WJG93708.1;transl_table=11 CP118132.1 Genbank gene 731016 731768 . - . ID=gene-PUW35_03445;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=PUW35_03445 CP118132.1 Protein Homology CDS 731016 731768 . - 0 ID=cds-WJG93709.1;Parent=gene-PUW35_03445;Dbxref=NCBI_GP:WJG93709.1;Name=WJG93709.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=PUW35_03445;product=ribonucleotide monophosphatase NagD;protein_id=WJG93709.1;transl_table=11 CP118132.1 Genbank gene 731815 733035 . - . ID=gene-PUW35_03450;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=PUW35_03450 CP118132.1 Protein Homology CDS 731815 733035 . - 0 ID=cds-WJG93710.1;Parent=gene-PUW35_03450;Dbxref=NCBI_GP:WJG93710.1;Name=WJG93710.1;gbkey=CDS;gene=nagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=PUW35_03450;product=DNA-binding transcriptional regulator NagC;protein_id=WJG93710.1;transl_table=11 CP118132.1 Genbank gene 733040 734194 . - . ID=gene-PUW35_03455;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PUW35_03455 CP118132.1 Protein Homology CDS 733040 734194 . - 0 ID=cds-WJG93711.1;Parent=gene-PUW35_03455;Dbxref=NCBI_GP:WJG93711.1;Name=WJG93711.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=PUW35_03455;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WJG93711.1;transl_table=11 CP118132.1 Genbank gene 734253 735053 . - . ID=gene-PUW35_03460;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=PUW35_03460 CP118132.1 Protein Homology CDS 734253 735053 . - 0 ID=cds-WJG93712.1;Parent=gene-PUW35_03460;Dbxref=NCBI_GP:WJG93712.1;Name=WJG93712.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=PUW35_03460;product=glucosamine-6-phosphate deaminase;protein_id=WJG93712.1;transl_table=11 CP118132.1 Genbank gene 735379 737331 . + . ID=gene-PUW35_03465;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=PUW35_03465 CP118132.1 Protein Homology CDS 735379 737331 . + 0 ID=cds-WJG93713.1;Parent=gene-PUW35_03465;Dbxref=NCBI_GP:WJG93713.1;Name=WJG93713.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=PUW35_03465;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WJG93713.1;transl_table=11 CP118132.1 Genbank gene 737542 739209 . + . ID=gene-PUW35_03470;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=PUW35_03470 CP118132.1 Protein Homology CDS 737542 739209 . + 0 ID=cds-WJG93714.1;Parent=gene-PUW35_03470;Dbxref=NCBI_GP:WJG93714.1;Name=WJG93714.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=PUW35_03470;product=glutamine--tRNA ligase;protein_id=WJG93714.1;transl_table=11 CP118132.1 Genbank gene 739870 741276 . + . ID=gene-PUW35_03475;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=PUW35_03475 CP118132.1 Protein Homology CDS 739870 741276 . + 0 ID=cds-WJG93715.1;Parent=gene-PUW35_03475;Dbxref=NCBI_GP:WJG93715.1;Name=WJG93715.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=PUW35_03475;product=chitoporin;protein_id=WJG93715.1;transl_table=11 CP118132.1 Genbank gene 741326 741658 . + . ID=gene-PUW35_03480;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=PUW35_03480 CP118132.1 Protein Homology CDS 741326 741658 . + 0 ID=cds-WJG93716.1;Parent=gene-PUW35_03480;Dbxref=NCBI_GP:WJG93716.1;Name=WJG93716.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=PUW35_03480;product=ChiQ/YbfN family lipoprotein;protein_id=WJG93716.1;transl_table=11 CP118132.1 Genbank gene 741707 743011 . - . ID=gene-PUW35_03485;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=PUW35_03485 CP118132.1 Protein Homology CDS 741707 743011 . - 0 ID=cds-WJG93717.1;Parent=gene-PUW35_03485;Dbxref=NCBI_GP:WJG93717.1;Name=WJG93717.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=PUW35_03485;product=tricarballylate/proton symporter TcuC;protein_id=WJG93717.1;transl_table=11 CP118132.1 Genbank pseudogene 743062 744200 . - . ID=gene-PUW35_03490;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=pseudogene;locus_tag=PUW35_03490;pseudo=true CP118132.1 Protein Homology CDS 743062 744200 . - 0 ID=cds-PUW35_03490;Parent=gene-PUW35_03490;Note=frameshifted;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=PUW35_03490;product=tricarballylate utilization protein TcuB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 744187 745590 . - . ID=gene-PUW35_03495;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=PUW35_03495 CP118132.1 Protein Homology CDS 744187 745590 . - 0 ID=cds-WJG93718.1;Parent=gene-PUW35_03495;Dbxref=NCBI_GP:WJG93718.1;Name=WJG93718.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=PUW35_03495;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WJG93718.1;transl_table=11 CP118132.1 Genbank gene 745688 746614 . - . ID=gene-PUW35_03500;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=PUW35_03500 CP118132.1 Protein Homology CDS 745688 746614 . - 0 ID=cds-WJG93719.1;Parent=gene-PUW35_03500;Dbxref=NCBI_GP:WJG93719.1;Name=WJG93719.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=PUW35_03500;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WJG93719.1;transl_table=11 CP118132.1 Genbank gene 746729 747181 . - . ID=gene-PUW35_03505;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=PUW35_03505 CP118132.1 Protein Homology CDS 746729 747181 . - 0 ID=cds-WJG93720.1;Parent=gene-PUW35_03505;Dbxref=NCBI_GP:WJG93720.1;Name=WJG93720.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=PUW35_03505;product=ferric iron uptake transcriptional regulator;protein_id=WJG93720.1;transl_table=11 CP118132.1 Genbank pseudogene 747174 747259 . - . ID=gene-PUW35_03510;Name=PUW35_03510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_03510;pseudo=true CP118132.1 Protein Homology CDS 747174 747259 . - 0 ID=cds-PUW35_03510;Parent=gene-PUW35_03510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=PUW35_03510;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 CP118132.1 Genbank gene 747463 747993 . - . ID=gene-PUW35_03515;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=PUW35_03515 CP118132.1 Protein Homology CDS 747463 747993 . - 0 ID=cds-WJG93721.1;Parent=gene-PUW35_03515;Dbxref=NCBI_GP:WJG93721.1;Name=WJG93721.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=PUW35_03515;product=flavodoxin FldA;protein_id=WJG93721.1;transl_table=11 CP118132.1 Genbank gene 748144 748437 . - . ID=gene-PUW35_03520;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=PUW35_03520 CP118132.1 Protein Homology CDS 748144 748437 . - 0 ID=cds-WJG93722.1;Parent=gene-PUW35_03520;Dbxref=NCBI_GP:WJG93722.1;Name=WJG93722.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=PUW35_03520;product=LexA regulated protein;protein_id=WJG93722.1;transl_table=11 CP118132.1 Genbank gene 748571 749341 . - . ID=gene-PUW35_03525;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=PUW35_03525 CP118132.1 Protein Homology CDS 748571 749341 . - 0 ID=cds-WJG93723.1;Parent=gene-PUW35_03525;Dbxref=NCBI_GP:WJG93723.1;Name=WJG93723.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=PUW35_03525;product=esterase;protein_id=WJG93723.1;transl_table=11 CP118132.1 Genbank gene 749526 750068 . + . ID=gene-PUW35_03530;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=PUW35_03530 CP118132.1 Protein Homology CDS 749526 750068 . + 0 ID=cds-WJG93724.1;Parent=gene-PUW35_03530;Dbxref=NCBI_GP:WJG93724.1;Name=WJG93724.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=PUW35_03530;product=replication initiation negative regulator SeqA;protein_id=WJG93724.1;transl_table=11 CP118132.1 Genbank gene 750093 751733 . + . ID=gene-PUW35_03535;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=PUW35_03535 CP118132.1 Protein Homology CDS 750093 751733 . + 0 ID=cds-WJG93725.1;Parent=gene-PUW35_03535;Dbxref=NCBI_GP:WJG93725.1;Name=WJG93725.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=PUW35_03535;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WJG93725.1;transl_table=11 CP118132.1 Genbank gene 751848 752180 . - . ID=gene-PUW35_03540;Name=PUW35_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03540 CP118132.1 Protein Homology CDS 751848 752180 . - 0 ID=cds-WJG95014.1;Parent=gene-PUW35_03540;Dbxref=NCBI_GP:WJG95014.1;Name=WJG95014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024304.2;locus_tag=PUW35_03540;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WJG95014.1;transl_table=11 CP118132.1 Genbank pseudogene 752189 752332 . - . ID=gene-PUW35_03545;Name=PUW35_03545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_03545;pseudo=true CP118132.1 Protein Homology CDS 752189 752332 . - 0 ID=cds-PUW35_03545;Parent=gene-PUW35_03545;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024304.2;locus_tag=PUW35_03545;product=pyridoxamine 5'-phosphate oxidase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 752397 753716 . - . ID=gene-PUW35_03550;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=PUW35_03550 CP118132.1 Protein Homology CDS 752397 753716 . - 0 ID=cds-WJG93726.1;Parent=gene-PUW35_03550;Dbxref=NCBI_GP:WJG93726.1;Name=WJG93726.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=PUW35_03550;product=putrescine-ornithine antiporter;protein_id=WJG93726.1;transl_table=11 CP118132.1 Genbank gene 753713 755911 . - . ID=gene-PUW35_03555;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=PUW35_03555 CP118132.1 Protein Homology CDS 753713 755911 . - 0 ID=cds-WJG93727.1;Parent=gene-PUW35_03555;Dbxref=NCBI_GP:WJG93727.1;Name=WJG93727.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=PUW35_03555;product=ornithine decarboxylase SpeF;protein_id=WJG93727.1;transl_table=11 CP118132.1 Genbank gene 756291 756395 . - . ID=gene-PUW35_03560;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=PUW35_03560 CP118132.1 Protein Homology CDS 756291 756395 . - 0 ID=cds-WJG93728.1;Parent=gene-PUW35_03560;Dbxref=NCBI_GP:WJG93728.1;Name=WJG93728.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=PUW35_03560;product=leader peptide SpeFL;protein_id=WJG93728.1;transl_table=11 CP118132.1 Genbank gene 756671 757348 . - . ID=gene-PUW35_03565;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=PUW35_03565 CP118132.1 Protein Homology CDS 756671 757348 . - 0 ID=cds-WJG93729.1;Parent=gene-PUW35_03565;Dbxref=NCBI_GP:WJG93729.1;Name=WJG93729.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=PUW35_03565;product=two-component system response regulator KdpE;protein_id=WJG93729.1;transl_table=11 CP118132.1 Genbank pseudogene 757345 760045 . - . ID=gene-PUW35_03570;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=pseudogene;locus_tag=PUW35_03570;pseudo=true CP118132.1 Protein Homology CDS 757345 760045 . - 0 ID=cds-PUW35_03570;Parent=gene-PUW35_03570;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=PUW35_03570;product=two-component system sensor histidine kinase KdpD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 760042 760626 . - . ID=gene-PUW35_03575;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=PUW35_03575 CP118132.1 Protein Homology CDS 760042 760626 . - 0 ID=cds-WJG95015.1;Parent=gene-PUW35_03575;Dbxref=NCBI_GP:WJG95015.1;Name=WJG95015.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=PUW35_03575;product=potassium-transporting ATPase subunit KdpC;protein_id=WJG95015.1;transl_table=11 CP118132.1 Genbank gene 760635 762692 . - . ID=gene-PUW35_03580;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=PUW35_03580 CP118132.1 Protein Homology CDS 760635 762692 . - 0 ID=cds-WJG93730.1;Parent=gene-PUW35_03580;Dbxref=NCBI_GP:WJG93730.1;Name=WJG93730.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088017.1;locus_tag=PUW35_03580;product=potassium-transporting ATPase subunit KdpB;protein_id=WJG93730.1;transl_table=11 CP118132.1 Genbank gene 762713 764392 . - . ID=gene-PUW35_03585;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=PUW35_03585 CP118132.1 Protein Homology CDS 762713 764392 . - 0 ID=cds-WJG93731.1;Parent=gene-PUW35_03585;Dbxref=NCBI_GP:WJG93731.1;Name=WJG93731.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=PUW35_03585;product=potassium-transporting ATPase subunit KdpA;protein_id=WJG93731.1;transl_table=11 CP118132.1 Genbank gene 764392 764481 . - . ID=gene-PUW35_03590;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=PUW35_03590 CP118132.1 Protein Homology CDS 764392 764481 . - 0 ID=cds-WJG93732.1;Parent=gene-PUW35_03590;Dbxref=NCBI_GP:WJG93732.1;Name=WJG93732.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=PUW35_03590;product=K(+)-transporting ATPase subunit F;protein_id=WJG93732.1;transl_table=11 CP118132.1 Genbank gene 764818 765024 . + . ID=gene-PUW35_03595;Name=PUW35_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03595 CP118132.1 Protein Homology CDS 764818 765024 . + 0 ID=cds-WJG93733.1;Parent=gene-PUW35_03595;Dbxref=NCBI_GP:WJG93733.1;Name=WJG93733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=PUW35_03595;product=YbfA family protein;protein_id=WJG93733.1;transl_table=11 CP118132.1 Genbank gene 765136 766557 . + . ID=gene-PUW35_03600;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=PUW35_03600 CP118132.1 Protein Homology CDS 765136 766557 . + 0 ID=cds-WJG93734.1;Parent=gene-PUW35_03600;Dbxref=NCBI_GP:WJG93734.1;Name=WJG93734.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=PUW35_03600;product=deoxyribodipyrimidine photo-lyase;protein_id=WJG93734.1;transl_table=11 CP118132.1 Genbank gene 766595 768076 . - . ID=gene-PUW35_03605;Name=PUW35_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03605 CP118132.1 Protein Homology CDS 766595 768076 . - 0 ID=cds-WJG93735.1;Parent=gene-PUW35_03605;Dbxref=NCBI_GP:WJG93735.1;Name=WJG93735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=PUW35_03605;product=MFS transporter;protein_id=WJG93735.1;transl_table=11 CP118132.1 Genbank gene 768405 769148 . + . ID=gene-PUW35_03610;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=PUW35_03610 CP118132.1 Protein Homology CDS 768405 769148 . + 0 ID=cds-WJG95016.1;Parent=gene-PUW35_03610;Dbxref=NCBI_GP:WJG95016.1;Name=WJG95016.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=PUW35_03610;product=radiation resistance protein YbgI;protein_id=WJG95016.1;transl_table=11 CP118132.1 Genbank gene 769164 769820 . + . ID=gene-PUW35_03615;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=PUW35_03615 CP118132.1 Protein Homology CDS 769164 769820 . + 0 ID=cds-WJG93736.1;Parent=gene-PUW35_03615;Dbxref=NCBI_GP:WJG93736.1;Name=WJG93736.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=PUW35_03615;product=5-oxoprolinase subunit PxpB;protein_id=WJG93736.1;transl_table=11 CP118132.1 Genbank gene 769814 770746 . + . ID=gene-PUW35_03620;Name=PUW35_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03620 CP118132.1 Protein Homology CDS 769814 770746 . + 0 ID=cds-WJG93737.1;Parent=gene-PUW35_03620;Dbxref=NCBI_GP:WJG93737.1;Name=WJG93737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=PUW35_03620;product=biotin-dependent carboxyltransferase family protein;protein_id=WJG93737.1;transl_table=11 CP118132.1 Genbank gene 770736 771470 . + . ID=gene-PUW35_03625;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=PUW35_03625 CP118132.1 Protein Homology CDS 770736 771470 . + 0 ID=cds-WJG93738.1;Parent=gene-PUW35_03625;Dbxref=NCBI_GP:WJG93738.1;Name=WJG93738.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=PUW35_03625;product=5-oxoprolinase subunit PxpA;protein_id=WJG93738.1;transl_table=11 CP118132.1 Genbank gene 771592 772383 . + . ID=gene-PUW35_03630;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=PUW35_03630 CP118132.1 Protein Homology CDS 771592 772383 . + 0 ID=cds-WJG93739.1;Parent=gene-PUW35_03630;Dbxref=NCBI_GP:WJG93739.1;Name=WJG93739.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=PUW35_03630;product=endonuclease VIII;protein_id=WJG93739.1;transl_table=11 CP118132.1 Genbank gene 772438 773484 . - . ID=gene-PUW35_03635;Name=PUW35_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03635 CP118132.1 Protein Homology CDS 772438 773484 . - 0 ID=cds-WJG93740.1;Parent=gene-PUW35_03635;Dbxref=NCBI_GP:WJG93740.1;Name=WJG93740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=PUW35_03635;product=AbrB family transcriptional regulator;protein_id=WJG93740.1;transl_table=11 CP118132.1 Genbank pseudogene 773621 774903 . - . ID=gene-PUW35_03640;Name=PUW35_03640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_03640;pseudo=true CP118132.1 Protein Homology CDS 773621 774903 . - 0 ID=cds-PUW35_03640;Parent=gene-PUW35_03640;Note=frameshifted;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=PUW35_03640;product=citrate synthase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 775004 775249 . + . ID=gene-PUW35_03645;Name=PUW35_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03645 CP118132.1 GeneMarkS-2+ CDS 775004 775249 . + 0 ID=cds-WJG93741.1;Parent=gene-PUW35_03645;Dbxref=NCBI_GP:WJG93741.1;Name=WJG93741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_03645;product=hypothetical protein;protein_id=WJG93741.1;transl_table=11 CP118132.1 Genbank gene 775643 776047 . + . ID=gene-PUW35_03650;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=PUW35_03650 CP118132.1 Protein Homology CDS 775643 776047 . + 0 ID=cds-WJG93742.1;Parent=gene-PUW35_03650;Dbxref=NCBI_GP:WJG93742.1;Name=WJG93742.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=PUW35_03650;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WJG93742.1;transl_table=11 CP118132.1 Genbank gene 776041 776388 . + . ID=gene-PUW35_03655;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=PUW35_03655 CP118132.1 Protein Homology CDS 776041 776388 . + 0 ID=cds-WJG93743.1;Parent=gene-PUW35_03655;Dbxref=NCBI_GP:WJG93743.1;Name=WJG93743.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=PUW35_03655;product=succinate dehydrogenase membrane anchor subunit;protein_id=WJG93743.1;transl_table=11 CP118132.1 Genbank gene 776388 778154 . + . ID=gene-PUW35_03660;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=PUW35_03660 CP118132.1 Protein Homology CDS 776388 778154 . + 0 ID=cds-WJG93744.1;Parent=gene-PUW35_03660;Dbxref=NCBI_GP:WJG93744.1;Name=WJG93744.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=PUW35_03660;product=succinate dehydrogenase flavoprotein subunit;protein_id=WJG93744.1;transl_table=11 CP118132.1 Genbank gene 778171 778887 . + . ID=gene-PUW35_03665;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=PUW35_03665 CP118132.1 Protein Homology CDS 778171 778887 . + 0 ID=cds-WJG95017.1;Parent=gene-PUW35_03665;Dbxref=NCBI_GP:WJG95017.1;Name=WJG95017.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=PUW35_03665;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WJG95017.1;transl_table=11 CP118132.1 Genbank gene 779411 782212 . + . ID=gene-PUW35_03670;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=PUW35_03670 CP118132.1 Protein Homology CDS 779411 782212 . + 0 ID=cds-WJG93745.1;Parent=gene-PUW35_03670;Dbxref=NCBI_GP:WJG93745.1;Name=WJG93745.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=PUW35_03670;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WJG93745.1;transl_table=11 CP118132.1 Genbank gene 782227 783435 . + . ID=gene-PUW35_03675;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=PUW35_03675 CP118132.1 Protein Homology CDS 782227 783435 . + 0 ID=cds-WJG93746.1;Parent=gene-PUW35_03675;Dbxref=NCBI_GP:WJG93746.1;Name=WJG93746.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=PUW35_03675;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WJG93746.1;transl_table=11 CP118132.1 Genbank gene 783577 784743 . + . ID=gene-PUW35_03680;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=PUW35_03680 CP118132.1 Protein Homology CDS 783577 784743 . + 0 ID=cds-WJG93747.1;Parent=gene-PUW35_03680;Dbxref=NCBI_GP:WJG93747.1;Name=WJG93747.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=PUW35_03680;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WJG93747.1;transl_table=11 CP118132.1 Genbank gene 784743 785612 . + . ID=gene-PUW35_03685;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=PUW35_03685 CP118132.1 Protein Homology CDS 784743 785612 . + 0 ID=cds-WJG93748.1;Parent=gene-PUW35_03685;Dbxref=NCBI_GP:WJG93748.1;Name=WJG93748.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=PUW35_03685;product=succinate--CoA ligase subunit alpha;protein_id=WJG93748.1;transl_table=11 CP118132.1 Genbank gene 787195 788763 . + . ID=gene-PUW35_03690;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=PUW35_03690 CP118132.1 Protein Homology CDS 787195 788763 . + 0 ID=cds-WJG95018.1;Parent=gene-PUW35_03690;Dbxref=NCBI_GP:WJG95018.1;Name=WJG95018.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=PUW35_03690;product=cytochrome ubiquinol oxidase subunit I;protein_id=WJG95018.1;transl_table=11 CP118132.1 Genbank gene 788779 789918 . + . ID=gene-PUW35_03695;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PUW35_03695 CP118132.1 Protein Homology CDS 788779 789918 . + 0 ID=cds-WJG93749.1;Parent=gene-PUW35_03695;Dbxref=NCBI_GP:WJG93749.1;Name=WJG93749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=PUW35_03695;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WJG93749.1;transl_table=11 CP118132.1 Genbank gene 789933 790046 . + . ID=gene-PUW35_03700;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=PUW35_03700 CP118132.1 Protein Homology CDS 789933 790046 . + 0 ID=cds-WJG93750.1;Parent=gene-PUW35_03700;Dbxref=NCBI_GP:WJG93750.1;Name=WJG93750.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=PUW35_03700;product=cytochrome bd-I oxidase subunit CydX;protein_id=WJG93750.1;transl_table=11 CP118132.1 Genbank pseudogene 790046 790338 . + . ID=gene-PUW35_03705;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=pseudogene;locus_tag=PUW35_03705;pseudo=true CP118132.1 Protein Homology CDS 790046 790338 . + 0 ID=cds-PUW35_03705;Parent=gene-PUW35_03705;Note=frameshifted;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=PUW35_03705;product=cyd operon protein YbgE;pseudo=true;transl_table=11 CP118132.1 Genbank gene 790567 790971 . + . ID=gene-PUW35_03710;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=PUW35_03710 CP118132.1 Protein Homology CDS 790567 790971 . + 0 ID=cds-WJG93751.1;Parent=gene-PUW35_03710;Dbxref=NCBI_GP:WJG93751.1;Name=WJG93751.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=PUW35_03710;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WJG93751.1;transl_table=11 CP118132.1 Genbank gene 790968 791660 . + . ID=gene-PUW35_03715;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=PUW35_03715 CP118132.1 Protein Homology CDS 790968 791660 . + 0 ID=cds-WJG93752.1;Parent=gene-PUW35_03715;Dbxref=NCBI_GP:WJG93752.1;Name=WJG93752.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=PUW35_03715;product=Tol-Pal system protein TolQ;protein_id=WJG93752.1;transl_table=11 CP118132.1 Genbank gene 791664 792092 . + . ID=gene-PUW35_03720;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=PUW35_03720 CP118132.1 Protein Homology CDS 791664 792092 . + 0 ID=cds-WJG93753.1;Parent=gene-PUW35_03720;Dbxref=NCBI_GP:WJG93753.1;Name=WJG93753.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=PUW35_03720;product=colicin uptake protein TolR;protein_id=WJG93753.1;transl_table=11 CP118132.1 Genbank pseudogene 792157 793466 . + . ID=gene-PUW35_03725;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=pseudogene;locus_tag=PUW35_03725;pseudo=true CP118132.1 Protein Homology CDS 792157 793466 . + 0 ID=cds-PUW35_03725;Parent=gene-PUW35_03725;Note=frameshifted;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=PUW35_03725;product=cell envelope integrity protein TolA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 793590 794882 . + . ID=gene-PUW35_03730;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=PUW35_03730 CP118132.1 Protein Homology CDS 793590 794882 . + 0 ID=cds-WJG95019.1;Parent=gene-PUW35_03730;Dbxref=NCBI_GP:WJG95019.1;Name=WJG95019.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=PUW35_03730;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WJG95019.1;transl_table=11 CP118132.1 Genbank gene 794917 795441 . + . ID=gene-PUW35_03735;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=PUW35_03735 CP118132.1 Protein Homology CDS 794917 795441 . + 0 ID=cds-WJG93754.1;Parent=gene-PUW35_03735;Dbxref=NCBI_GP:WJG93754.1;Name=WJG93754.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=PUW35_03735;product=peptidoglycan-associated lipoprotein Pal;protein_id=WJG93754.1;transl_table=11 CP118132.1 Genbank gene 795451 796239 . + . ID=gene-PUW35_03740;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=PUW35_03740 CP118132.1 Protein Homology CDS 795451 796239 . + 0 ID=cds-WJG93755.1;Parent=gene-PUW35_03740;Dbxref=NCBI_GP:WJG93755.1;Name=WJG93755.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=PUW35_03740;product=cell division protein CpoB;protein_id=WJG93755.1;transl_table=11 CP118132.1 Genbank gene 796404 796479 . + . ID=gene-PUW35_03745;Name=PUW35_03745;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_03745 CP118132.1 tRNAscan-SE tRNA 796404 796479 . + . ID=rna-PUW35_03745;Parent=gene-PUW35_03745;anticodon=(pos:796437..796439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03745;product=tRNA-Lys CP118132.1 tRNAscan-SE exon 796404 796479 . + . ID=exon-PUW35_03745-1;Parent=rna-PUW35_03745;anticodon=(pos:796437..796439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03745;product=tRNA-Lys CP118132.1 Genbank gene 796616 796691 . + . ID=gene-PUW35_03750;Name=PUW35_03750;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_03750 CP118132.1 tRNAscan-SE tRNA 796616 796691 . + . ID=rna-PUW35_03750;Parent=gene-PUW35_03750;anticodon=(pos:796649..796651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03750;product=tRNA-Val CP118132.1 tRNAscan-SE exon 796616 796691 . + . ID=exon-PUW35_03750-1;Parent=rna-PUW35_03750;anticodon=(pos:796649..796651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03750;product=tRNA-Val CP118132.1 Genbank gene 796695 796770 . + . ID=gene-PUW35_03755;Name=PUW35_03755;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_03755 CP118132.1 tRNAscan-SE tRNA 796695 796770 . + . ID=rna-PUW35_03755;Parent=gene-PUW35_03755;anticodon=(pos:796728..796730);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03755;product=tRNA-Lys CP118132.1 tRNAscan-SE exon 796695 796770 . + . ID=exon-PUW35_03755-1;Parent=rna-PUW35_03755;anticodon=(pos:796728..796730);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_03755;product=tRNA-Lys CP118132.1 Genbank gene 797189 798232 . + . ID=gene-PUW35_03760;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=PUW35_03760 CP118132.1 Protein Homology CDS 797189 798232 . + 0 ID=cds-WJG93756.1;Parent=gene-PUW35_03760;Dbxref=NCBI_GP:WJG93756.1;Name=WJG93756.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=PUW35_03760;product=quinolinate synthase NadA;protein_id=WJG93756.1;transl_table=11 CP118132.1 Genbank gene 798257 798976 . + . ID=gene-PUW35_03765;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=PUW35_03765 CP118132.1 Protein Homology CDS 798257 798976 . + 0 ID=cds-WJG93757.1;Parent=gene-PUW35_03765;Dbxref=NCBI_GP:WJG93757.1;Name=WJG93757.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=PUW35_03765;product=nicotinamide riboside transporter PnuC;protein_id=WJG93757.1;transl_table=11 CP118132.1 Genbank gene 798973 799911 . - . ID=gene-PUW35_03770;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=PUW35_03770 CP118132.1 Protein Homology CDS 798973 799911 . - 0 ID=cds-WJG93758.1;Parent=gene-PUW35_03770;Dbxref=NCBI_GP:WJG93758.1;Name=WJG93758.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=PUW35_03770;product=CDF family zinc transporter ZitB;protein_id=WJG93758.1;transl_table=11 CP118132.1 Genbank gene 800022 800408 . - . ID=gene-PUW35_03775;Name=PUW35_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03775 CP118132.1 Protein Homology CDS 800022 800408 . - 0 ID=cds-WJG93759.1;Parent=gene-PUW35_03775;Dbxref=NCBI_GP:WJG93759.1;Name=WJG93759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=PUW35_03775;product=YbgS-like family protein;protein_id=WJG93759.1;transl_table=11 CP118132.1 Genbank pseudogene 800728 801779 . + . ID=gene-PUW35_03780;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=pseudogene;locus_tag=PUW35_03780;pseudo=true CP118132.1 Protein Homology CDS 800728 801779 . + 0 ID=cds-PUW35_03780;Parent=gene-PUW35_03780;Note=frameshifted;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=PUW35_03780;product=3-deoxy-7-phosphoheptulonate synthase AroG;pseudo=true;transl_table=11 CP118132.1 Genbank gene 801873 802418 . - . ID=gene-PUW35_03785;Name=PUW35_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03785 CP118132.1 Protein Homology CDS 801873 802418 . - 0 ID=cds-WJG93760.1;Parent=gene-PUW35_03785;Dbxref=NCBI_GP:WJG93760.1;Name=WJG93760.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=PUW35_03785;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WJG93760.1;transl_table=11 CP118132.1 Genbank gene 802433 803278 . - . ID=gene-PUW35_03790;Name=PUW35_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03790 CP118132.1 Protein Homology CDS 802433 803278 . - 0 ID=cds-WJG93761.1;Parent=gene-PUW35_03790;Dbxref=NCBI_GP:WJG93761.1;Name=WJG93761.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=PUW35_03790;product=fumarate hydratase;protein_id=WJG93761.1;transl_table=11 CP118132.1 Genbank gene 803408 804298 . + . ID=gene-PUW35_03795;Name=PUW35_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03795 CP118132.1 Protein Homology CDS 803408 804298 . + 0 ID=cds-WJG93762.1;Parent=gene-PUW35_03795;Dbxref=NCBI_GP:WJG93762.1;Name=WJG93762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=PUW35_03795;product=LysR family transcriptional regulator;protein_id=WJG93762.1;transl_table=11 CP118132.1 Genbank gene 804299 805282 . - . ID=gene-PUW35_03800;Name=PUW35_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03800 CP118132.1 Protein Homology CDS 804299 805282 . - 0 ID=cds-WJG93763.1;Parent=gene-PUW35_03800;Dbxref=NCBI_GP:WJG93763.1;Name=WJG93763.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=PUW35_03800;product=LysR family transcriptional regulator;protein_id=WJG93763.1;transl_table=11 CP118132.1 Genbank gene 805505 806773 . + . ID=gene-PUW35_03805;Name=PUW35_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03805 CP118132.1 Protein Homology CDS 805505 806773 . + 0 ID=cds-WJG93764.1;Parent=gene-PUW35_03805;Dbxref=NCBI_GP:WJG93764.1;Name=WJG93764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=PUW35_03805;product=SLC13 family permease;protein_id=WJG93764.1;transl_table=11 CP118132.1 Genbank gene 806823 807062 . + . ID=gene-PUW35_03810;Name=PUW35_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03810 CP118132.1 Protein Homology CDS 806823 807062 . + 0 ID=cds-WJG93765.1;Parent=gene-PUW35_03810;Dbxref=NCBI_GP:WJG93765.1;Name=WJG93765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=PUW35_03810;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJG93765.1;transl_table=11 CP118132.1 Genbank gene 807079 808851 . + . ID=gene-PUW35_03815;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW35_03815 CP118132.1 Protein Homology CDS 807079 808851 . + 0 ID=cds-WJG93766.1;Parent=gene-PUW35_03815;Dbxref=NCBI_GP:WJG93766.1;Name=WJG93766.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW35_03815;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJG93766.1;transl_table=11 CP118132.1 Genbank gene 808864 810138 . + . ID=gene-PUW35_03820;Name=PUW35_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03820 CP118132.1 Protein Homology CDS 808864 810138 . + 0 ID=cds-WJG93767.1;Parent=gene-PUW35_03820;Dbxref=NCBI_GP:WJG93767.1;Name=WJG93767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW35_03820;product=oxalacetate decarboxylase subunit beta;protein_id=WJG93767.1;transl_table=11 CP118132.1 Genbank gene 810257 810955 . + . ID=gene-PUW35_03825;Name=PUW35_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03825 CP118132.1 Protein Homology CDS 810257 810955 . + 0 ID=cds-WJG93768.1;Parent=gene-PUW35_03825;Dbxref=NCBI_GP:WJG93768.1;Name=WJG93768.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=PUW35_03825;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WJG93768.1;transl_table=11 CP118132.1 Genbank gene 811335 812414 . + . ID=gene-PUW35_03830;Name=PUW35_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03830 CP118132.1 Protein Homology CDS 811335 812414 . + 0 ID=cds-WJG93769.1;Parent=gene-PUW35_03830;Dbxref=NCBI_GP:WJG93769.1;Name=WJG93769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=PUW35_03830;product=iron ABC transporter permease;protein_id=WJG93769.1;transl_table=11 CP118132.1 Genbank gene 812414 813190 . + . ID=gene-PUW35_03835;Name=PUW35_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03835 CP118132.1 Protein Homology CDS 812414 813190 . + 0 ID=cds-WJG93770.1;Parent=gene-PUW35_03835;Dbxref=NCBI_GP:WJG93770.1;Name=WJG93770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=PUW35_03835;product=ABC transporter ATP-binding protein;protein_id=WJG93770.1;transl_table=11 CP118132.1 Genbank gene 813281 814033 . - . ID=gene-PUW35_03840;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=PUW35_03840 CP118132.1 Protein Homology CDS 813281 814033 . - 0 ID=cds-WJG93771.1;Parent=gene-PUW35_03840;Dbxref=NCBI_GP:WJG93771.1;Name=WJG93771.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=PUW35_03840;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WJG93771.1;transl_table=11 CP118132.1 Genbank gene 814257 815297 . - . ID=gene-PUW35_03845;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=PUW35_03845 CP118132.1 Protein Homology CDS 814257 815297 . - 0 ID=cds-WJG93772.1;Parent=gene-PUW35_03845;Dbxref=NCBI_GP:WJG93772.1;Name=WJG93772.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=PUW35_03845;product=galactose-1-epimerase;protein_id=WJG93772.1;transl_table=11 CP118132.1 Genbank gene 815291 816439 . - . ID=gene-PUW35_03850;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=PUW35_03850 CP118132.1 Protein Homology CDS 815291 816439 . - 0 ID=cds-WJG93773.1;Parent=gene-PUW35_03850;Dbxref=NCBI_GP:WJG93773.1;Name=WJG93773.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=PUW35_03850;product=galactokinase;protein_id=WJG93773.1;transl_table=11 CP118132.1 Genbank pseudogene 816442 817486 . - . ID=gene-PUW35_03855;Name=galT;gbkey=Gene;gene=galT;gene_biotype=pseudogene;locus_tag=PUW35_03855;pseudo=true CP118132.1 Protein Homology CDS 816442 817486 . - 0 ID=cds-PUW35_03855;Parent=gene-PUW35_03855;Note=frameshifted;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=PUW35_03855;product=galactose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 817497 818513 . - . ID=gene-PUW35_03860;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=PUW35_03860 CP118132.1 Protein Homology CDS 817497 818513 . - 0 ID=cds-WJG93774.1;Parent=gene-PUW35_03860;Dbxref=NCBI_GP:WJG93774.1;Name=WJG93774.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=PUW35_03860;product=UDP-glucose 4-epimerase GalE;protein_id=WJG93774.1;transl_table=11 CP118132.1 Genbank gene 818736 819644 . - . ID=gene-PUW35_03865;Name=PUW35_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03865 CP118132.1 Protein Homology CDS 818736 819644 . - 0 ID=cds-WJG93775.1;Parent=gene-PUW35_03865;Dbxref=NCBI_GP:WJG93775.1;Name=WJG93775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=PUW35_03865;product=DUF2167 domain-containing protein;protein_id=WJG93775.1;transl_table=11 CP118132.1 Genbank pseudogene 819815 821289 . - . ID=gene-PUW35_03870;Name=modF;gbkey=Gene;gene=modF;gene_biotype=pseudogene;locus_tag=PUW35_03870;pseudo=true CP118132.1 Protein Homology CDS 819815 821289 . - 0 ID=cds-PUW35_03870;Parent=gene-PUW35_03870;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=PUW35_03870;product=molybdate ABC transporter ATP-binding protein ModF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 821357 822145 . - . ID=gene-PUW35_03875;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=PUW35_03875 CP118132.1 Protein Homology CDS 821357 822145 . - 0 ID=cds-WJG93776.1;Parent=gene-PUW35_03875;Dbxref=NCBI_GP:WJG93776.1;Name=WJG93776.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=PUW35_03875;product=molybdenum-dependent transcriptional regulator;protein_id=WJG93776.1;transl_table=11 CP118132.1 Genbank gene 822274 822423 . + . ID=gene-PUW35_03880;Name=PUW35_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03880 CP118132.1 Protein Homology CDS 822274 822423 . + 0 ID=cds-WJG93777.1;Parent=gene-PUW35_03880;Dbxref=NCBI_GP:WJG93777.1;Name=WJG93777.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=PUW35_03880;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WJG93777.1;transl_table=11 CP118132.1 Genbank gene 822590 823363 . + . ID=gene-PUW35_03885;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=PUW35_03885 CP118132.1 Protein Homology CDS 822590 823363 . + 0 ID=cds-WJG93778.1;Parent=gene-PUW35_03885;Dbxref=NCBI_GP:WJG93778.1;Name=WJG93778.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=PUW35_03885;product=molybdate ABC transporter substrate-binding protein;protein_id=WJG93778.1;transl_table=11 CP118132.1 Genbank gene 823363 824052 . + . ID=gene-PUW35_03890;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=PUW35_03890 CP118132.1 Protein Homology CDS 823363 824052 . + 0 ID=cds-WJG93779.1;Parent=gene-PUW35_03890;Dbxref=NCBI_GP:WJG93779.1;Name=WJG93779.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=PUW35_03890;product=molybdate ABC transporter permease subunit;protein_id=WJG93779.1;transl_table=11 CP118132.1 Genbank gene 824055 825113 . + . ID=gene-PUW35_03895;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=PUW35_03895 CP118132.1 Protein Homology CDS 824055 825113 . + 0 ID=cds-WJG93780.1;Parent=gene-PUW35_03895;Dbxref=NCBI_GP:WJG93780.1;Name=WJG93780.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=PUW35_03895;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WJG93780.1;transl_table=11 CP118132.1 Genbank gene 825114 825932 . - . ID=gene-PUW35_03900;Name=PUW35_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03900 CP118132.1 Protein Homology CDS 825114 825932 . - 0 ID=cds-WJG93781.1;Parent=gene-PUW35_03900;Dbxref=NCBI_GP:WJG93781.1;Name=WJG93781.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=PUW35_03900;product=pyridoxal phosphatase;protein_id=WJG93781.1;transl_table=11 CP118132.1 Genbank gene 826096 827091 . + . ID=gene-PUW35_03905;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=PUW35_03905 CP118132.1 Protein Homology CDS 826096 827091 . + 0 ID=cds-WJG93782.1;Parent=gene-PUW35_03905;Dbxref=NCBI_GP:WJG93782.1;Name=WJG93782.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=PUW35_03905;product=6-phosphogluconolactonase;protein_id=WJG93782.1;transl_table=11 CP118132.1 Genbank gene 827235 828551 . - . ID=gene-PUW35_03910;Name=PUW35_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03910 CP118132.1 Protein Homology CDS 827235 828551 . - 0 ID=cds-WJG93783.1;Parent=gene-PUW35_03910;Dbxref=NCBI_GP:WJG93783.1;Name=WJG93783.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=PUW35_03910;product=putative acyl-CoA thioester hydrolase;protein_id=WJG93783.1;transl_table=11 CP118132.1 Genbank pseudogene 828789 830011 . + . ID=gene-PUW35_03915;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=pseudogene;locus_tag=PUW35_03915;pseudo=true CP118132.1 Protein Homology CDS 828789 830011 . + 0 ID=cds-PUW35_03915;Parent=gene-PUW35_03915;Note=frameshifted;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=PUW35_03915;product=imidazolonepropionase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 830008 830949 . + . ID=gene-PUW35_03920;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=PUW35_03920 CP118132.1 Protein Homology CDS 830008 830949 . + 0 ID=cds-WJG93784.1;Parent=gene-PUW35_03920;Dbxref=NCBI_GP:WJG93784.1;Name=WJG93784.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=PUW35_03920;product=formimidoylglutamase;protein_id=WJG93784.1;transl_table=11 CP118132.1 Genbank gene 830994 831719 . + . ID=gene-PUW35_03925;Name=PUW35_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03925 CP118132.1 Protein Homology CDS 830994 831719 . + 0 ID=cds-WJG93785.1;Parent=gene-PUW35_03925;Dbxref=NCBI_GP:WJG93785.1;Name=WJG93785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=PUW35_03925;product=histidine utilization repressor;protein_id=WJG93785.1;transl_table=11 CP118132.1 Genbank gene 831916 833601 . + . ID=gene-PUW35_03930;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=PUW35_03930 CP118132.1 Protein Homology CDS 831916 833601 . + 0 ID=cds-WJG93786.1;Parent=gene-PUW35_03930;Dbxref=NCBI_GP:WJG93786.1;Name=WJG93786.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=PUW35_03930;product=urocanate hydratase;protein_id=WJG93786.1;transl_table=11 CP118132.1 Genbank gene 833603 835123 . + . ID=gene-PUW35_03935;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=PUW35_03935 CP118132.1 Protein Homology CDS 833603 835123 . + 0 ID=cds-WJG93787.1;Parent=gene-PUW35_03935;Dbxref=NCBI_GP:WJG93787.1;Name=WJG93787.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=PUW35_03935;product=histidine ammonia-lyase;protein_id=WJG93787.1;transl_table=11 CP118132.1 Genbank gene 835208 835684 . - . ID=gene-PUW35_03940;Name=PUW35_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03940 CP118132.1 Protein Homology CDS 835208 835684 . - 0 ID=cds-WJG93788.1;Parent=gene-PUW35_03940;Dbxref=NCBI_GP:WJG93788.1;Name=WJG93788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=PUW35_03940;product=kinase inhibitor;protein_id=WJG93788.1;transl_table=11 CP118132.1 Genbank gene 835742 837031 . - . ID=gene-PUW35_03945;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=PUW35_03945 CP118132.1 Protein Homology CDS 835742 837031 . - 0 ID=cds-WJG93789.1;Parent=gene-PUW35_03945;Dbxref=NCBI_GP:WJG93789.1;Name=WJG93789.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=PUW35_03945;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WJG93789.1;transl_table=11 CP118132.1 Genbank gene 837118 838158 . + . ID=gene-PUW35_03950;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=PUW35_03950 CP118132.1 Protein Homology CDS 837118 838158 . + 0 ID=cds-WJG93790.1;Parent=gene-PUW35_03950;Dbxref=NCBI_GP:WJG93790.1;Name=WJG93790.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=PUW35_03950;product=biotin synthase BioB;protein_id=WJG93790.1;transl_table=11 CP118132.1 Genbank gene 838155 839312 . + . ID=gene-PUW35_03955;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=PUW35_03955 CP118132.1 Protein Homology CDS 838155 839312 . + 0 ID=cds-WJG93791.1;Parent=gene-PUW35_03955;Dbxref=NCBI_GP:WJG93791.1;Name=WJG93791.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=PUW35_03955;product=8-amino-7-oxononanoate synthase;protein_id=WJG93791.1;transl_table=11 CP118132.1 Genbank gene 839296 840051 . + . ID=gene-PUW35_03960;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=PUW35_03960 CP118132.1 Protein Homology CDS 839296 840051 . + 0 ID=cds-WJG93792.1;Parent=gene-PUW35_03960;Dbxref=NCBI_GP:WJG93792.1;Name=WJG93792.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=PUW35_03960;product=malonyl-ACP O-methyltransferase BioC;protein_id=WJG93792.1;transl_table=11 CP118132.1 Genbank gene 840044 840730 . + . ID=gene-PUW35_03965;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PUW35_03965 CP118132.1 Protein Homology CDS 840044 840730 . + 0 ID=cds-WJG93793.1;Parent=gene-PUW35_03965;Dbxref=NCBI_GP:WJG93793.1;Name=WJG93793.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=PUW35_03965;product=dethiobiotin synthase;protein_id=WJG93793.1;transl_table=11 CP118132.1 Genbank gene 841380 843401 . + . ID=gene-PUW35_03970;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=PUW35_03970 CP118132.1 Protein Homology CDS 841380 843401 . + 0 ID=cds-WJG93794.1;Parent=gene-PUW35_03970;Dbxref=NCBI_GP:WJG93794.1;Name=WJG93794.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=PUW35_03970;product=excinuclease ABC subunit UvrB;protein_id=WJG93794.1;transl_table=11 CP118132.1 Genbank gene 843710 843883 . + . ID=gene-PUW35_03975;Name=PUW35_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_03975 CP118132.1 Protein Homology CDS 843710 843883 . + 0 ID=cds-WJG93795.1;Parent=gene-PUW35_03975;Dbxref=NCBI_GP:WJG93795.1;Name=WJG93795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=PUW35_03975;product=hypothetical protein;protein_id=WJG93795.1;transl_table=11 CP118132.1 Genbank pseudogene 843891 846159 . + . ID=gene-PUW35_03980;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=pseudogene;locus_tag=PUW35_03980;pseudo=true CP118132.1 Protein Homology CDS 843891 846159 . + 0 ID=cds-PUW35_03980;Parent=gene-PUW35_03980;Note=frameshifted;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=PUW35_03980;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;pseudo=true;transl_table=11 CP118132.1 Genbank gene 846251 847159 . - . ID=gene-PUW35_03985;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=PUW35_03985 CP118132.1 Protein Homology CDS 846251 847159 . - 0 ID=cds-WJG93796.1;Parent=gene-PUW35_03985;Dbxref=NCBI_GP:WJG93796.1;Name=WJG93796.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=PUW35_03985;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WJG93796.1;transl_table=11 CP118132.1 cmsearch riboswitch 847424 847568 . + . ID=id-CP118132.1:847424..847568;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118132.1 Genbank gene 847556 848545 . + . ID=gene-PUW35_03990;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=PUW35_03990 CP118132.1 Protein Homology CDS 847556 848545 . + 0 ID=cds-WJG93797.1;Parent=gene-PUW35_03990;Dbxref=NCBI_GP:WJG93797.1;Name=WJG93797.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=PUW35_03990;product=GTP 3'%2C8-cyclase MoaA;protein_id=WJG93797.1;transl_table=11 CP118132.1 Genbank gene 848567 849079 . + . ID=gene-PUW35_03995;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=PUW35_03995 CP118132.1 Protein Homology CDS 848567 849079 . + 0 ID=cds-WJG93798.1;Parent=gene-PUW35_03995;Dbxref=NCBI_GP:WJG93798.1;Name=WJG93798.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=PUW35_03995;product=molybdenum cofactor biosynthesis protein B;protein_id=WJG93798.1;transl_table=11 CP118132.1 Genbank gene 849082 849567 . + . ID=gene-PUW35_04000;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=PUW35_04000 CP118132.1 Protein Homology CDS 849082 849567 . + 0 ID=cds-WJG93799.1;Parent=gene-PUW35_04000;Dbxref=NCBI_GP:WJG93799.1;Name=WJG93799.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=PUW35_04000;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WJG93799.1;transl_table=11 CP118132.1 Genbank gene 849560 849805 . + . ID=gene-PUW35_04005;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=PUW35_04005 CP118132.1 Protein Homology CDS 849560 849805 . + 0 ID=cds-WJG93800.1;Parent=gene-PUW35_04005;Dbxref=NCBI_GP:WJG93800.1;Name=WJG93800.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=PUW35_04005;product=molybdopterin synthase sulfur carrier subunit;protein_id=WJG93800.1;transl_table=11 CP118132.1 Genbank gene 849807 850259 . + . ID=gene-PUW35_04010;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=PUW35_04010 CP118132.1 Protein Homology CDS 849807 850259 . + 0 ID=cds-WJG93801.1;Parent=gene-PUW35_04010;Dbxref=NCBI_GP:WJG93801.1;Name=WJG93801.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=PUW35_04010;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WJG93801.1;transl_table=11 CP118132.1 Genbank gene 850307 851011 . + . ID=gene-PUW35_04015;Name=PUW35_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04015 CP118132.1 Protein Homology CDS 850307 851011 . + 0 ID=cds-WJG93802.1;Parent=gene-PUW35_04015;Dbxref=NCBI_GP:WJG93802.1;Name=WJG93802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=PUW35_04015;product=Bax inhibitor-1/YccA family protein;protein_id=WJG93802.1;transl_table=11 CP118132.1 Genbank gene 851156 851863 . + . ID=gene-PUW35_04020;Name=PUW35_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04020 CP118132.1 Protein Homology CDS 851156 851863 . + 0 ID=cds-WJG93803.1;Parent=gene-PUW35_04020;Dbxref=NCBI_GP:WJG93803.1;Name=WJG93803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=PUW35_04020;product=Bax inhibitor-1 family protein;protein_id=WJG93803.1;transl_table=11 CP118132.1 Genbank gene 851887 852495 . + . ID=gene-PUW35_04025;Name=PUW35_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04025 CP118132.1 Protein Homology CDS 851887 852495 . + 0 ID=cds-WJG95020.1;Parent=gene-PUW35_04025;Dbxref=NCBI_GP:WJG95020.1;Name=WJG95020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=PUW35_04025;product=hypothetical protein;protein_id=WJG95020.1;transl_table=11 CP118132.1 Genbank gene 852503 853063 . + . ID=gene-PUW35_04030;Name=PUW35_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04030 CP118132.1 Protein Homology CDS 852503 853063 . + 0 ID=cds-WJG93804.1;Parent=gene-PUW35_04030;Dbxref=NCBI_GP:WJG93804.1;Name=WJG93804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=PUW35_04030;product=hypothetical protein;protein_id=WJG93804.1;transl_table=11 CP118132.1 Genbank pseudogene 853066 854027 . - . ID=gene-PUW35_04035;Name=PUW35_04035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04035;pseudo=true CP118132.1 Protein Homology CDS 853066 854027 . - 0 ID=cds-PUW35_04035;Parent=gene-PUW35_04035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=PUW35_04035;product=YbhN family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 854027 855268 . - . ID=gene-PUW35_04040;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=PUW35_04040 CP118132.1 Protein Homology CDS 854027 855268 . - 0 ID=cds-WJG93805.1;Parent=gene-PUW35_04040;Dbxref=NCBI_GP:WJG93805.1;Name=WJG93805.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=PUW35_04040;product=cardiolipin synthase ClsB;protein_id=WJG93805.1;transl_table=11 CP118132.1 Genbank gene 855265 856023 . - . ID=gene-PUW35_04045;Name=PUW35_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04045 CP118132.1 Protein Homology CDS 855265 856023 . - 0 ID=cds-WJG93806.1;Parent=gene-PUW35_04045;Dbxref=NCBI_GP:WJG93806.1;Name=WJG93806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=PUW35_04045;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WJG93806.1;transl_table=11 CP118132.1 Genbank gene 856156 856566 . + . ID=gene-PUW35_04050;Name=PUW35_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04050 CP118132.1 Protein Homology CDS 856156 856566 . + 0 ID=cds-WJG93807.1;Parent=gene-PUW35_04050;Dbxref=NCBI_GP:WJG93807.1;Name=WJG93807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=PUW35_04050;product=YbhQ family protein;protein_id=WJG93807.1;transl_table=11 CP118132.1 Genbank gene 856528 857634 . - . ID=gene-PUW35_04055;Name=PUW35_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04055 CP118132.1 Protein Homology CDS 856528 857634 . - 0 ID=cds-WJG93808.1;Parent=gene-PUW35_04055;Dbxref=NCBI_GP:WJG93808.1;Name=WJG93808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=PUW35_04055;product=ABC transporter permease;protein_id=WJG93808.1;transl_table=11 CP118132.1 Genbank gene 857750 858880 . - . ID=gene-PUW35_04060;Name=PUW35_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04060 CP118132.1 Protein Homology CDS 857750 858880 . - 0 ID=cds-WJG93809.1;Parent=gene-PUW35_04060;Dbxref=NCBI_GP:WJG93809.1;Name=WJG93809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=PUW35_04060;product=ABC transporter permease;protein_id=WJG93809.1;transl_table=11 CP118132.1 Genbank gene 858873 860609 . - . ID=gene-PUW35_04065;Name=PUW35_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04065 CP118132.1 Protein Homology CDS 858873 860609 . - 0 ID=cds-WJG93810.1;Parent=gene-PUW35_04065;Dbxref=NCBI_GP:WJG93810.1;Name=WJG93810.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=PUW35_04065;product=ATP-binding cassette domain-containing protein;protein_id=WJG93810.1;transl_table=11 CP118132.1 Genbank pseudogene 860602 861596 . - . ID=gene-PUW35_04070;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=pseudogene;locus_tag=PUW35_04070;pseudo=true CP118132.1 Protein Homology CDS 860602 861596 . - 0 ID=cds-PUW35_04070;Parent=gene-PUW35_04070;Note=frameshifted;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=PUW35_04070;product=secretion protein HlyD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 861596 862270 . - . ID=gene-PUW35_04075;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=PUW35_04075 CP118132.1 Protein Homology CDS 861596 862270 . - 0 ID=cds-WJG93811.1;Parent=gene-PUW35_04075;Dbxref=NCBI_GP:WJG93811.1;Name=WJG93811.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=PUW35_04075;product=transcriptional regulator CecR;protein_id=WJG93811.1;transl_table=11 CP118132.1 Genbank gene 862500 863861 . + . ID=gene-PUW35_04080;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=PUW35_04080 CP118132.1 Protein Homology CDS 862500 863861 . + 0 ID=cds-WJG93812.1;Parent=gene-PUW35_04080;Dbxref=NCBI_GP:WJG93812.1;Name=WJG93812.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=PUW35_04080;product=ATP-dependent RNA helicase RhlE;protein_id=WJG93812.1;transl_table=11 CP118132.1 Genbank pseudogene 864069 866213 . + . ID=gene-PUW35_04085;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=pseudogene;locus_tag=PUW35_04085;pseudo=true CP118132.1 Protein Homology CDS 864069 866213 . + 0 ID=cds-PUW35_04085;Parent=gene-PUW35_04085;Note=internal stop;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=PUW35_04085;product=ATP-dependent DNA helicase DinG;pseudo=true;transl_table=11 CP118132.1 Genbank gene 866243 867217 . + . ID=gene-PUW35_04090;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=PUW35_04090 CP118132.1 Protein Homology CDS 866243 867217 . + 0 ID=cds-WJG93813.1;Parent=gene-PUW35_04090;Dbxref=NCBI_GP:WJG93813.1;Name=WJG93813.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=PUW35_04090;product=DNA-binding protein YbiB;protein_id=WJG93813.1;transl_table=11 CP118132.1 Genbank gene 867373 867633 . - . ID=gene-PUW35_04095;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=PUW35_04095 CP118132.1 Protein Homology CDS 867373 867633 . - 0 ID=cds-WJG93814.1;Parent=gene-PUW35_04095;Dbxref=NCBI_GP:WJG93814.1;Name=WJG93814.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=PUW35_04095;product=DUF1471 family protein YbiJ;protein_id=WJG93814.1;transl_table=11 CP118132.1 Genbank gene 867918 868184 . - . ID=gene-PUW35_04100;Name=PUW35_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04100 CP118132.1 Protein Homology CDS 867918 868184 . - 0 ID=cds-WJG93815.1;Parent=gene-PUW35_04100;Dbxref=NCBI_GP:WJG93815.1;Name=WJG93815.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=PUW35_04100;product=DksA/TraR family C4-type zinc finger protein;protein_id=WJG93815.1;transl_table=11 CP118132.1 Genbank pseudogene 868389 869313 . + . ID=gene-PUW35_04105;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=pseudogene;locus_tag=PUW35_04105;pseudo=true CP118132.1 Protein Homology CDS 868389 869313 . + 0 ID=cds-PUW35_04105;Parent=gene-PUW35_04105;Note=frameshifted;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=PUW35_04105;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 869310 871532 . - . ID=gene-PUW35_04110;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=PUW35_04110 CP118132.1 Protein Homology CDS 869310 871532 . - 0 ID=cds-WJG93816.1;Parent=gene-PUW35_04110;Dbxref=NCBI_GP:WJG93816.1;Name=WJG93816.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=PUW35_04110;product=mechanosensitive channel protein;protein_id=WJG93816.1;transl_table=11 CP118132.1 Genbank gene 871651 872373 . - . ID=gene-PUW35_04115;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=PUW35_04115 CP118132.1 Protein Homology CDS 871651 872373 . - 0 ID=cds-WJG93817.1;Parent=gene-PUW35_04115;Dbxref=NCBI_GP:WJG93817.1;Name=WJG93817.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=PUW35_04115;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WJG93817.1;transl_table=11 CP118132.1 Genbank gene 872370 873029 . - . ID=gene-PUW35_04120;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=PUW35_04120 CP118132.1 Protein Homology CDS 872370 873029 . - 0 ID=cds-WJG93818.1;Parent=gene-PUW35_04120;Dbxref=NCBI_GP:WJG93818.1;Name=WJG93818.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=PUW35_04120;product=glutamine ABC transporter permease GlnP;protein_id=WJG93818.1;transl_table=11 CP118132.1 Genbank pseudogene 873173 873918 . - . ID=gene-PUW35_04125;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=pseudogene;locus_tag=PUW35_04125;pseudo=true CP118132.1 Protein Homology CDS 873173 873918 . - 0 ID=cds-PUW35_04125;Parent=gene-PUW35_04125;Note=frameshifted;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=PUW35_04125;product=glutamine ABC transporter substrate-binding protein GlnH;pseudo=true;transl_table=11 CP118132.1 Genbank gene 874395 874898 . - . ID=gene-PUW35_04130;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=PUW35_04130 CP118132.1 Protein Homology CDS 874395 874898 . - 0 ID=cds-WJG93819.1;Parent=gene-PUW35_04130;Dbxref=NCBI_GP:WJG93819.1;Name=WJG93819.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=PUW35_04130;product=DNA starvation/stationary phase protection protein Dps;protein_id=WJG93819.1;transl_table=11 CP118132.1 Genbank pseudogene 875201 876087 . - . ID=gene-PUW35_04135;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=pseudogene;locus_tag=PUW35_04135;pseudo=true CP118132.1 Protein Homology CDS 875201 876087 . - 0 ID=cds-PUW35_04135;Parent=gene-PUW35_04135;Note=frameshifted;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=PUW35_04135;product=threonine/homoserine exporter RhtA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 876441 876956 . + . ID=gene-PUW35_04140;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=PUW35_04140 CP118132.1 Protein Homology CDS 876441 876956 . + 0 ID=cds-WJG93820.1;Parent=gene-PUW35_04140;Dbxref=NCBI_GP:WJG93820.1;Name=WJG93820.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=PUW35_04140;product=outer membrane protein OmpX;protein_id=WJG93820.1;transl_table=11 CP118132.1 Genbank gene 877019 878599 . - . ID=gene-PUW35_04145;Name=PUW35_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04145 CP118132.1 Protein Homology CDS 877019 878599 . - 0 ID=cds-WJG93821.1;Parent=gene-PUW35_04145;Dbxref=NCBI_GP:WJG93821.1;Name=WJG93821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=PUW35_04145;product=phosphoethanolamine transferase;protein_id=WJG93821.1;transl_table=11 CP118132.1 Genbank gene 878864 878992 . - . ID=gene-PUW35_04150;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=PUW35_04150 CP118132.1 Protein Homology CDS 878864 878992 . - 0 ID=cds-WJG93822.1;Parent=gene-PUW35_04150;Dbxref=NCBI_GP:WJG93822.1;Name=WJG93822.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=PUW35_04150;product=manganase accumulation protein MntS;protein_id=WJG93822.1;transl_table=11 CP118132.1 Genbank gene 879178 879651 . + . ID=gene-PUW35_04155;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=PUW35_04155 CP118132.1 Protein Homology CDS 879178 879651 . + 0 ID=cds-WJG93823.1;Parent=gene-PUW35_04155;Dbxref=NCBI_GP:WJG93823.1;Name=WJG93823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=PUW35_04155;product=manganese-binding transcriptional regulator MntR;protein_id=WJG93823.1;transl_table=11 CP118132.1 Genbank pseudogene 879648 880759 . + . ID=gene-PUW35_04160;Name=PUW35_04160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04160;pseudo=true CP118132.1 Protein Homology CDS 879648 880759 . + 0 ID=cds-PUW35_04160;Parent=gene-PUW35_04160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=PUW35_04160;product=anion transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 880803 881723 . - . ID=gene-PUW35_04165;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=PUW35_04165 CP118132.1 Protein Homology CDS 880803 881723 . - 0 ID=cds-WJG93824.1;Parent=gene-PUW35_04165;Dbxref=NCBI_GP:WJG93824.1;Name=WJG93824.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=PUW35_04165;product=L%2CD-transpeptidase;protein_id=WJG93824.1;transl_table=11 CP118132.1 Genbank gene 881942 883534 . + . ID=gene-PUW35_04170;Name=PUW35_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04170 CP118132.1 Protein Homology CDS 881942 883534 . + 0 ID=cds-WJG93825.1;Parent=gene-PUW35_04170;Dbxref=NCBI_GP:WJG93825.1;Name=WJG93825.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=PUW35_04170;product=ABC-F family ATPase;protein_id=WJG93825.1;transl_table=11 CP118132.1 Genbank pseudogene 883934 884676 . + . ID=gene-PUW35_04175;Name=PUW35_04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04175;pseudo=true CP118132.1 Protein Homology CDS 883934 884676 . + 0 ID=cds-PUW35_04175;Parent=gene-PUW35_04175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=PUW35_04175;product=DUF4261 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 884705 885433 . - . ID=gene-PUW35_04180;Name=PUW35_04180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04180;pseudo=true CP118132.1 Protein Homology CDS 884705 885433 . - 0 ID=cds-PUW35_04180;Parent=gene-PUW35_04180;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=PUW35_04180;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 885629 886894 . - . ID=gene-PUW35_04185;Name=PUW35_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04185 CP118132.1 Protein Homology CDS 885629 886894 . - 0 ID=cds-WJG93826.1;Parent=gene-PUW35_04185;Dbxref=NCBI_GP:WJG93826.1;Name=WJG93826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=PUW35_04185;product=DUF1479 domain-containing protein;protein_id=WJG93826.1;transl_table=11 CP118132.1 Genbank gene 887156 887965 . + . ID=gene-PUW35_04190;Name=PUW35_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04190 CP118132.1 Protein Homology CDS 887156 887965 . + 0 ID=cds-WJG93827.1;Parent=gene-PUW35_04190;Dbxref=NCBI_GP:WJG93827.1;Name=WJG93827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=PUW35_04190;product=Cof-type HAD-IIB family hydrolase;protein_id=WJG93827.1;transl_table=11 CP118132.1 Genbank pseudogene 888043 890474 . - . ID=gene-PUW35_04195;Name=PUW35_04195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04195;pseudo=true CP118132.1 Protein Homology CDS 888043 890474 . - 0 ID=cds-PUW35_04195;Parent=gene-PUW35_04195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=PUW35_04195;product=glycyl radical protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 890480 891378 . - . ID=gene-PUW35_04200;Name=PUW35_04200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04200;pseudo=true CP118132.1 Protein Homology CDS 890480 891378 . - 0 ID=cds-PUW35_04200;Parent=gene-PUW35_04200;Note=frameshifted;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=PUW35_04200;product=glycyl-radical enzyme activating protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 891656 892405 . - . ID=gene-PUW35_04205;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=PUW35_04205 CP118132.1 Protein Homology CDS 891656 892405 . - 0 ID=cds-WJG93828.1;Parent=gene-PUW35_04205;Dbxref=NCBI_GP:WJG93828.1;Name=WJG93828.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=PUW35_04205;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WJG93828.1;transl_table=11 CP118132.1 Genbank gene 892405 893640 . - . ID=gene-PUW35_04210;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=PUW35_04210 CP118132.1 Protein Homology CDS 892405 893640 . - 0 ID=cds-WJG93829.1;Parent=gene-PUW35_04210;Dbxref=NCBI_GP:WJG93829.1;Name=WJG93829.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=PUW35_04210;product=molybdopterin molybdotransferase MoeA;protein_id=WJG93829.1;transl_table=11 CP118132.1 Genbank gene 893843 894784 . + . ID=gene-PUW35_04215;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=PUW35_04215 CP118132.1 Protein Homology CDS 893843 894784 . + 0 ID=cds-WJG93830.1;Parent=gene-PUW35_04215;Dbxref=NCBI_GP:WJG93830.1;Name=WJG93830.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=PUW35_04215;product=beta-aspartyl-peptidase;protein_id=WJG93830.1;transl_table=11 CP118132.1 Genbank gene 894795 896666 . + . ID=gene-PUW35_04220;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=PUW35_04220 CP118132.1 Protein Homology CDS 894795 896666 . + 0 ID=cds-WJG93831.1;Parent=gene-PUW35_04220;Dbxref=NCBI_GP:WJG93831.1;Name=WJG93831.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=PUW35_04220;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WJG93831.1;transl_table=11 CP118132.1 Genbank pseudogene 896699 898236 . + . ID=gene-PUW35_04225;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=pseudogene;locus_tag=PUW35_04225;pseudo=true CP118132.1 Protein Homology CDS 896699 898236 . + 0 ID=cds-PUW35_04225;Parent=gene-PUW35_04225;Note=frameshifted;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=PUW35_04225;product=glutathione ABC transporter substrate-binding protein GsiB;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 898297 899216 . + . ID=gene-PUW35_04230;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=pseudogene;locus_tag=PUW35_04230;pseudo=true CP118132.1 Protein Homology CDS 898297 899216 . + 0 ID=cds-PUW35_04230;Parent=gene-PUW35_04230;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=PUW35_04230;product=glutathione ABC transporter permease GsiC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 899219 900130 . + . ID=gene-PUW35_04235;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=PUW35_04235 CP118132.1 Protein Homology CDS 899219 900130 . + 0 ID=cds-WJG93832.1;Parent=gene-PUW35_04235;Dbxref=NCBI_GP:WJG93832.1;Name=WJG93832.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=PUW35_04235;product=glutathione ABC transporter permease GsiD;protein_id=WJG93832.1;transl_table=11 CP118132.1 Genbank gene 900221 901546 . - . ID=gene-PUW35_04240;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=PUW35_04240 CP118132.1 Protein Homology CDS 900221 901546 . - 0 ID=cds-WJG93833.1;Parent=gene-PUW35_04240;Dbxref=NCBI_GP:WJG93833.1;Name=WJG93833.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=PUW35_04240;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WJG93833.1;transl_table=11 CP118132.1 Genbank gene 901777 902160 . + . ID=gene-PUW35_04245;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=PUW35_04245 CP118132.1 Protein Homology CDS 901777 902160 . + 0 ID=cds-WJG93834.1;Parent=gene-PUW35_04245;Dbxref=NCBI_GP:WJG93834.1;Name=WJG93834.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=PUW35_04245;product=biofilm formation regulator BssR;protein_id=WJG93834.1;transl_table=11 CP118132.1 Genbank pseudogene 902262 902508 . + . ID=gene-PUW35_04250;Name=PUW35_04250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04250;pseudo=true CP118132.1 Protein Homology CDS 902262 902508 . + 0 ID=cds-PUW35_04250;Parent=gene-PUW35_04250;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=PUW35_04250;product=IS4 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 902873 903388 . + . ID=gene-PUW35_04255;Name=PUW35_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04255 CP118132.1 Protein Homology CDS 902873 903388 . + 0 ID=cds-WJG93835.1;Parent=gene-PUW35_04255;Dbxref=NCBI_GP:WJG93835.1;Name=WJG93835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=PUW35_04255;product=CoA ester lyase;protein_id=WJG93835.1;transl_table=11 CP118132.1 Genbank gene 903306 904160 . + . ID=gene-PUW35_04260;Name=PUW35_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04260 CP118132.1 Protein Homology CDS 903306 904160 . + 0 ID=cds-WJG93836.1;Parent=gene-PUW35_04260;Dbxref=NCBI_GP:WJG93836.1;Name=WJG93836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459832.3;locus_tag=PUW35_04260;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WJG93836.1;transl_table=11 CP118132.1 Genbank gene 904171 905124 . + . ID=gene-PUW35_04265;Name=PUW35_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04265 CP118132.1 Protein Homology CDS 904171 905124 . + 0 ID=cds-WJG93837.1;Parent=gene-PUW35_04265;Dbxref=NCBI_GP:WJG93837.1;Name=WJG93837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=PUW35_04265;product=FAD-binding protein;protein_id=WJG93837.1;transl_table=11 CP118132.1 Genbank gene 905157 905354 . + . ID=gene-PUW35_04270;Name=PUW35_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04270 CP118132.1 GeneMarkS-2+ CDS 905157 905354 . + 0 ID=cds-WJG93838.1;Parent=gene-PUW35_04270;Dbxref=NCBI_GP:WJG93838.1;Name=WJG93838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_04270;product=hypothetical protein;protein_id=WJG93838.1;transl_table=11 CP118132.1 Genbank gene 905418 906581 . + . ID=gene-PUW35_04275;Name=PUW35_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04275 CP118132.1 Protein Homology CDS 905418 906581 . + 0 ID=cds-WJG93839.1;Parent=gene-PUW35_04275;Dbxref=NCBI_GP:WJG93839.1;Name=WJG93839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=PUW35_04275;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WJG93839.1;transl_table=11 CP118132.1 Genbank gene 907030 908715 . + . ID=gene-PUW35_04280;Name=PUW35_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04280 CP118132.1 Protein Homology CDS 907030 908715 . + 0 ID=cds-WJG93840.1;Parent=gene-PUW35_04280;Dbxref=NCBI_GP:WJG93840.1;Name=WJG93840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=PUW35_04280;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WJG93840.1;transl_table=11 CP118132.1 Genbank gene 908721 909611 . - . ID=gene-PUW35_04285;Name=PUW35_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04285 CP118132.1 Protein Homology CDS 908721 909611 . - 0 ID=cds-WJG93841.1;Parent=gene-PUW35_04285;Dbxref=NCBI_GP:WJG93841.1;Name=WJG93841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=PUW35_04285;product=LysR family transcriptional regulator;protein_id=WJG93841.1;transl_table=11 CP118132.1 Genbank gene 909873 910298 . - . ID=gene-PUW35_04290;Name=PUW35_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04290 CP118132.1 Protein Homology CDS 909873 910298 . - 0 ID=cds-WJG93842.1;Parent=gene-PUW35_04290;Dbxref=NCBI_GP:WJG93842.1;Name=WJG93842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=PUW35_04290;product=GntP family permease;protein_id=WJG93842.1;transl_table=11 CP118132.1 Genbank pseudogene 910645 910844 . + . ID=gene-PUW35_04295;Name=PUW35_04295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04295;pseudo=true CP118132.1 Protein Homology CDS 910645 910844 . + 0 ID=cds-PUW35_04295;Parent=gene-PUW35_04295;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611161.1;locus_tag=PUW35_04295;product=IS1 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 910824 911323 . + . ID=gene-PUW35_04300;Name=PUW35_04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04300;pseudo=true CP118132.1 Protein Homology CDS 910824 911323 . + 0 ID=cds-PUW35_04300;Parent=gene-PUW35_04300;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384889.1;locus_tag=PUW35_04300;product=PQQ-dependent sugar dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 911320 911946 . - . ID=gene-PUW35_04305;Name=PUW35_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04305 CP118132.1 Protein Homology CDS 911320 911946 . - 0 ID=cds-WJG93843.1;Parent=gene-PUW35_04305;Dbxref=NCBI_GP:WJG93843.1;Name=WJG93843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=PUW35_04305;product=glutathione S-transferase family protein;protein_id=WJG93843.1;transl_table=11 CP118132.1 Genbank gene 912190 913392 . + . ID=gene-PUW35_04310;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=PUW35_04310 CP118132.1 Protein Homology CDS 912190 913392 . + 0 ID=cds-WJG93844.1;Parent=gene-PUW35_04310;Dbxref=NCBI_GP:WJG93844.1;Name=WJG93844.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=PUW35_04310;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WJG93844.1;transl_table=11 CP118132.1 Genbank gene 913437 914195 . - . ID=gene-PUW35_04315;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=PUW35_04315 CP118132.1 Protein Homology CDS 913437 914195 . - 0 ID=cds-WJG93845.1;Parent=gene-PUW35_04315;Dbxref=NCBI_GP:WJG93845.1;Name=WJG93845.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=PUW35_04315;product=DNA-binding transcriptional repressor DeoR;protein_id=WJG93845.1;transl_table=11 CP118132.1 Genbank gene 914267 914875 . - . ID=gene-PUW35_04320;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=PUW35_04320 CP118132.1 Protein Homology CDS 914267 914875 . - 0 ID=cds-WJG95021.1;Parent=gene-PUW35_04320;Dbxref=NCBI_GP:WJG95021.1;Name=WJG95021.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=PUW35_04320;product=undecaprenyl-diphosphate phosphatase;protein_id=WJG95021.1;transl_table=11 CP118132.1 Genbank gene 915188 916420 . + . ID=gene-PUW35_04325;Name=PUW35_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04325 CP118132.1 Protein Homology CDS 915188 916420 . + 0 ID=cds-WJG93846.1;Parent=gene-PUW35_04325;Dbxref=NCBI_GP:WJG93846.1;Name=WJG93846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=PUW35_04325;product=MFS transporter;protein_id=WJG93846.1;transl_table=11 CP118132.1 Genbank gene 916473 917288 . - . ID=gene-PUW35_04330;Name=PUW35_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04330 CP118132.1 Protein Homology CDS 916473 917288 . - 0 ID=cds-WJG93847.1;Parent=gene-PUW35_04330;Dbxref=NCBI_GP:WJG93847.1;Name=WJG93847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=PUW35_04330;product=Cof-type HAD-IIB family hydrolase;protein_id=WJG93847.1;transl_table=11 CP118132.1 Genbank gene 917285 918496 . - . ID=gene-PUW35_04335;Name=PUW35_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04335 CP118132.1 Protein Homology CDS 917285 918496 . - 0 ID=cds-WJG93848.1;Parent=gene-PUW35_04335;Dbxref=NCBI_GP:WJG93848.1;Name=WJG93848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=PUW35_04335;product=MFS transporter;protein_id=WJG93848.1;transl_table=11 CP118132.1 Genbank gene 918655 919275 . + . ID=gene-PUW35_04340;Name=PUW35_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04340 CP118132.1 Protein Homology CDS 918655 919275 . + 0 ID=cds-WJG93849.1;Parent=gene-PUW35_04340;Dbxref=NCBI_GP:WJG93849.1;Name=WJG93849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=PUW35_04340;product=TetR/AcrR family transcriptional regulator;protein_id=WJG93849.1;transl_table=11 CP118132.1 Genbank gene 919392 921077 . - . ID=gene-PUW35_04345;Name=PUW35_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04345 CP118132.1 Protein Homology CDS 919392 921077 . - 0 ID=cds-WJG93850.1;Parent=gene-PUW35_04345;Dbxref=NCBI_GP:WJG93850.1;Name=WJG93850.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=PUW35_04345;product=aspartate:alanine antiporter;protein_id=WJG93850.1;transl_table=11 CP118132.1 Genbank gene 921348 921725 . + . ID=gene-PUW35_04350;Name=PUW35_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04350 CP118132.1 Protein Homology CDS 921348 921725 . + 0 ID=cds-WJG93851.1;Parent=gene-PUW35_04350;Dbxref=NCBI_GP:WJG93851.1;Name=WJG93851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=PUW35_04350;product=inner membrane protein YbjM;protein_id=WJG93851.1;transl_table=11 CP118132.1 Genbank gene 921757 922020 . - . ID=gene-PUW35_04355;Name=PUW35_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04355 CP118132.1 Protein Homology CDS 921757 922020 . - 0 ID=cds-WJG93852.1;Parent=gene-PUW35_04355;Dbxref=NCBI_GP:WJG93852.1;Name=WJG93852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=PUW35_04355;product=GrxA family glutaredoxin;protein_id=WJG93852.1;transl_table=11 CP118132.1 Genbank gene 922190 922480 . + . ID=gene-PUW35_04360;Name=PUW35_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04360 CP118132.1 Protein Homology CDS 922190 922480 . + 0 ID=cds-WJG93853.1;Parent=gene-PUW35_04360;Dbxref=NCBI_GP:WJG93853.1;Name=WJG93853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=PUW35_04360;product=YbjC family protein;protein_id=WJG93853.1;transl_table=11 CP118132.1 Genbank gene 922464 923186 . + . ID=gene-PUW35_04365;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=PUW35_04365 CP118132.1 Protein Homology CDS 922464 923186 . + 0 ID=cds-WJG93854.1;Parent=gene-PUW35_04365;Dbxref=NCBI_GP:WJG93854.1;Name=WJG93854.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=PUW35_04365;product=nitroreductase NfsA;protein_id=WJG93854.1;transl_table=11 CP118132.1 Genbank gene 923244 924146 . + . ID=gene-PUW35_04370;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=PUW35_04370 CP118132.1 Protein Homology CDS 923244 924146 . + 0 ID=cds-WJG93855.1;Parent=gene-PUW35_04370;Dbxref=NCBI_GP:WJG93855.1;Name=WJG93855.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=PUW35_04370;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WJG93855.1;transl_table=11 CP118132.1 Genbank gene 924243 924719 . + . ID=gene-PUW35_04375;Name=PUW35_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04375 CP118132.1 Protein Homology CDS 924243 924719 . + 0 ID=cds-WJG93856.1;Parent=gene-PUW35_04375;Dbxref=NCBI_GP:WJG93856.1;Name=WJG93856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=PUW35_04375;product=YbjN domain-containing protein;protein_id=WJG93856.1;transl_table=11 CP118132.1 Genbank gene 925068 926180 . + . ID=gene-PUW35_04380;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=PUW35_04380 CP118132.1 Protein Homology CDS 925068 926180 . + 0 ID=cds-WJG95022.1;Parent=gene-PUW35_04380;Dbxref=NCBI_GP:WJG95022.1;Name=WJG95022.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=PUW35_04380;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WJG95022.1;transl_table=11 CP118132.1 Genbank gene 926268 927401 . + . ID=gene-PUW35_04385;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=PUW35_04385 CP118132.1 Protein Homology CDS 926268 927401 . + 0 ID=cds-WJG93857.1;Parent=gene-PUW35_04385;Dbxref=NCBI_GP:WJG93857.1;Name=WJG93857.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=PUW35_04385;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WJG93857.1;transl_table=11 CP118132.1 Genbank gene 927411 928364 . + . ID=gene-PUW35_04390;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=PUW35_04390 CP118132.1 Protein Homology CDS 927411 928364 . + 0 ID=cds-WJG93858.1;Parent=gene-PUW35_04390;Dbxref=NCBI_GP:WJG93858.1;Name=WJG93858.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=PUW35_04390;product=putrescine ABC transporter permease PotH;protein_id=WJG93858.1;transl_table=11 CP118132.1 Genbank gene 928361 929212 . + . ID=gene-PUW35_04395;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=PUW35_04395 CP118132.1 Protein Homology CDS 928361 929212 . + 0 ID=cds-WJG93859.1;Parent=gene-PUW35_04395;Dbxref=NCBI_GP:WJG93859.1;Name=WJG93859.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=PUW35_04395;product=putrescine ABC transporter permease PotI;protein_id=WJG93859.1;transl_table=11 CP118132.1 Genbank gene 929286 929759 . + . ID=gene-PUW35_04400;Name=PUW35_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04400 CP118132.1 Protein Homology CDS 929286 929759 . + 0 ID=cds-WJG95023.1;Parent=gene-PUW35_04400;Dbxref=NCBI_GP:WJG95023.1;Name=WJG95023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=PUW35_04400;product=YbjO family protein;protein_id=WJG95023.1;transl_table=11 CP118132.1 Genbank gene 929850 930929 . + . ID=gene-PUW35_04405;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=PUW35_04405 CP118132.1 Protein Homology CDS 929850 930929 . + 0 ID=cds-WJG95024.1;Parent=gene-PUW35_04405;Dbxref=NCBI_GP:WJG95024.1;Name=WJG95024.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=PUW35_04405;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WJG95024.1;transl_table=11 CP118132.1 Genbank gene 931224 932567 . + . ID=gene-PUW35_04410;Name=PUW35_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04410 CP118132.1 Protein Homology CDS 931224 932567 . + 0 ID=cds-WJG93860.1;Parent=gene-PUW35_04410;Dbxref=NCBI_GP:WJG93860.1;Name=WJG93860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=PUW35_04410;product=PTS sugar transporter subunit IIC;protein_id=WJG93860.1;transl_table=11 CP118132.1 Genbank gene 932597 932917 . + . ID=gene-PUW35_04415;Name=PUW35_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04415 CP118132.1 Protein Homology CDS 932597 932917 . + 0 ID=cds-WJG93861.1;Parent=gene-PUW35_04415;Dbxref=NCBI_GP:WJG93861.1;Name=WJG93861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=PUW35_04415;product=PTS sugar transporter subunit IIB;protein_id=WJG93861.1;transl_table=11 CP118132.1 Genbank pseudogene 932927 934413 . + . ID=gene-PUW35_04420;Name=PUW35_04420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04420;pseudo=true CP118132.1 Protein Homology CDS 932927 934413 . + 0 ID=cds-PUW35_04420;Parent=gene-PUW35_04420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=PUW35_04420;product=sulfatase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 934632 935363 . - . ID=gene-PUW35_04425;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PUW35_04425 CP118132.1 Protein Homology CDS 934632 935363 . - 0 ID=cds-WJG93862.1;Parent=gene-PUW35_04425;Dbxref=NCBI_GP:WJG93862.1;Name=WJG93862.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=PUW35_04425;product=ABC transporter substrate-binding protein ArtJ;protein_id=WJG93862.1;transl_table=11 CP118132.1 Genbank gene 935600 936268 . - . ID=gene-PUW35_04430;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=PUW35_04430 CP118132.1 Protein Homology CDS 935600 936268 . - 0 ID=cds-WJG93863.1;Parent=gene-PUW35_04430;Dbxref=NCBI_GP:WJG93863.1;Name=WJG93863.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=PUW35_04430;product=arginine ABC transporter permease ArtM;protein_id=WJG93863.1;transl_table=11 CP118132.1 Genbank gene 936268 936984 . - . ID=gene-PUW35_04435;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=PUW35_04435 CP118132.1 Protein Homology CDS 936268 936984 . - 0 ID=cds-WJG93864.1;Parent=gene-PUW35_04435;Dbxref=NCBI_GP:WJG93864.1;Name=WJG93864.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=PUW35_04435;product=arginine ABC transporter permease ArtQ;protein_id=WJG93864.1;transl_table=11 CP118132.1 Genbank gene 936991 937722 . - . ID=gene-PUW35_04440;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PUW35_04440 CP118132.1 Protein Homology CDS 936991 937722 . - 0 ID=cds-WJG93865.1;Parent=gene-PUW35_04440;Dbxref=NCBI_GP:WJG93865.1;Name=WJG93865.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=PUW35_04440;product=arginine ABC transporter substrate-binding protein;protein_id=WJG93865.1;transl_table=11 CP118132.1 Genbank gene 937740 938468 . - . ID=gene-PUW35_04445;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=PUW35_04445 CP118132.1 Protein Homology CDS 937740 938468 . - 0 ID=cds-WJG93866.1;Parent=gene-PUW35_04445;Dbxref=NCBI_GP:WJG93866.1;Name=WJG93866.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=PUW35_04445;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WJG93866.1;transl_table=11 CP118132.1 Genbank gene 938698 939213 . - . ID=gene-PUW35_04450;Name=PUW35_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04450 CP118132.1 Protein Homology CDS 938698 939213 . - 0 ID=cds-WJG93867.1;Parent=gene-PUW35_04450;Dbxref=NCBI_GP:WJG93867.1;Name=WJG93867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=PUW35_04450;product=lipoprotein;protein_id=WJG93867.1;transl_table=11 CP118132.1 Genbank gene 939341 939664 . + . ID=gene-PUW35_04455;Name=PUW35_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04455 CP118132.1 Protein Homology CDS 939341 939664 . + 0 ID=cds-WJG93868.1;Parent=gene-PUW35_04455;Dbxref=NCBI_GP:WJG93868.1;Name=WJG93868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=PUW35_04455;product=heavy metal-binding domain-containing protein;protein_id=WJG93868.1;transl_table=11 CP118132.1 Genbank gene 939661 940491 . + . ID=gene-PUW35_04460;Name=PUW35_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04460 CP118132.1 Protein Homology CDS 939661 940491 . + 0 ID=cds-WJG93869.1;Parent=gene-PUW35_04460;Dbxref=NCBI_GP:WJG93869.1;Name=WJG93869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=PUW35_04460;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WJG93869.1;transl_table=11 CP118132.1 Genbank gene 940488 941501 . - . ID=gene-PUW35_04465;Name=PUW35_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04465 CP118132.1 Protein Homology CDS 940488 941501 . - 0 ID=cds-WJG93870.1;Parent=gene-PUW35_04465;Dbxref=NCBI_GP:WJG93870.1;Name=WJG93870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=PUW35_04465;product=NAD(P)-dependent oxidoreductase;protein_id=WJG93870.1;transl_table=11 CP118132.1 Genbank pseudogene 941597 943029 . - . ID=gene-PUW35_04470;Name=PUW35_04470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04470;pseudo=true CP118132.1 Protein Homology CDS 941597 943029 . - 0 ID=cds-PUW35_04470;Parent=gene-PUW35_04470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=PUW35_04470;product=DUF2867 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 943040 944041 . - . ID=gene-PUW35_04475;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=PUW35_04475 CP118132.1 Protein Homology CDS 943040 944041 . - 0 ID=cds-WJG93871.1;Parent=gene-PUW35_04475;Dbxref=NCBI_GP:WJG93871.1;Name=WJG93871.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=PUW35_04475;product=low-specificity L-threonine aldolase;protein_id=WJG93871.1;transl_table=11 CP118132.1 Genbank gene 944080 945798 . - . ID=gene-PUW35_04480;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=PUW35_04480 CP118132.1 Protein Homology CDS 944080 945798 . - 0 ID=cds-WJG93872.1;Parent=gene-PUW35_04480;Dbxref=NCBI_GP:WJG93872.1;Name=WJG93872.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=PUW35_04480;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WJG93872.1;transl_table=11 CP118132.1 Genbank gene 945956 946924 . - . ID=gene-PUW35_04485;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=PUW35_04485 CP118132.1 Protein Homology CDS 945956 946924 . - 0 ID=cds-WJG95025.1;Parent=gene-PUW35_04485;Dbxref=NCBI_GP:WJG95025.1;Name=WJG95025.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=PUW35_04485;product=NADH oxidoreductase;protein_id=WJG95025.1;transl_table=11 CP118132.1 Genbank gene 946936 948588 . - . ID=gene-PUW35_04490;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=PUW35_04490 CP118132.1 Protein Homology CDS 946936 948588 . - 0 ID=cds-WJG93873.1;Parent=gene-PUW35_04490;Dbxref=NCBI_GP:WJG93873.1;Name=WJG93873.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=PUW35_04490;product=hydroxylamine reductase;protein_id=WJG93873.1;transl_table=11 CP118132.1 Genbank gene 948732 949631 . - . ID=gene-PUW35_04495;Name=PUW35_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04495 CP118132.1 Protein Homology CDS 948732 949631 . - 0 ID=cds-WJG93874.1;Parent=gene-PUW35_04495;Dbxref=NCBI_GP:WJG93874.1;Name=WJG93874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=PUW35_04495;product=lysine exporter LysO family protein;protein_id=WJG93874.1;transl_table=11 CP118132.1 Genbank gene 949833 951491 . + . ID=gene-PUW35_04500;Name=PUW35_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04500 CP118132.1 Protein Homology CDS 949833 951491 . + 0 ID=cds-WJG93875.1;Parent=gene-PUW35_04500;Dbxref=NCBI_GP:WJG93875.1;Name=WJG93875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=PUW35_04500;product=ATP-dependent endonuclease;protein_id=WJG93875.1;transl_table=11 CP118132.1 Genbank pseudogene 951488 952442 . - . ID=gene-PUW35_04505;Name=PUW35_04505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04505;pseudo=true CP118132.1 Protein Homology CDS 951488 952442 . - 0 ID=cds-PUW35_04505;Parent=gene-PUW35_04505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=PUW35_04505;product=VirK/YbjX family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 952588 953702 . + . ID=gene-PUW35_04510;Name=macA;gbkey=Gene;gene=macA;gene_biotype=pseudogene;locus_tag=PUW35_04510;pseudo=true CP118132.1 Protein Homology CDS 952588 953702 . + 0 ID=cds-PUW35_04510;Parent=gene-PUW35_04510;Note=frameshifted;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=PUW35_04510;product=macrolide transporter subunit MacA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 953699 955645 . + . ID=gene-PUW35_04515;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=PUW35_04515 CP118132.1 Protein Homology CDS 953699 955645 . + 0 ID=cds-WJG93876.1;Parent=gene-PUW35_04515;Dbxref=NCBI_GP:WJG93876.1;Name=WJG93876.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=macB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=PUW35_04515;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WJG93876.1;transl_table=11 CP118132.1 Genbank gene 955775 955996 . - . ID=gene-PUW35_04520;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=PUW35_04520 CP118132.1 Protein Homology CDS 955775 955996 . - 0 ID=cds-WJG93877.1;Parent=gene-PUW35_04520;Dbxref=NCBI_GP:WJG93877.1;Name=WJG93877.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=PUW35_04520;product=cold shock-like protein CspD;protein_id=WJG93877.1;transl_table=11 CP118132.1 Genbank gene 956147 956224 . + . ID=gene-PUW35_04525;Name=PUW35_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04525 CP118132.1 Protein Homology CDS 956147 956224 . + 0 ID=cds-WJG95026.1;Parent=gene-PUW35_04525;Dbxref=NCBI_GP:WJG95026.1;Name=WJG95026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=PUW35_04525;product=hypothetical protein;protein_id=WJG95026.1;transl_table=11 CP118132.1 Genbank gene 956320 956640 . + . ID=gene-PUW35_04530;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=PUW35_04530 CP118132.1 Protein Homology CDS 956320 956640 . + 0 ID=cds-WJG93878.1;Parent=gene-PUW35_04530;Dbxref=NCBI_GP:WJG93878.1;Name=WJG93878.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=PUW35_04530;product=ATP-dependent Clp protease adapter ClpS;protein_id=WJG93878.1;transl_table=11 CP118132.1 Genbank gene 956671 958947 . + . ID=gene-PUW35_04535;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=PUW35_04535 CP118132.1 Protein Homology CDS 956671 958947 . + 0 ID=cds-WJG93879.1;Parent=gene-PUW35_04535;Dbxref=NCBI_GP:WJG93879.1;Name=WJG93879.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=PUW35_04535;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WJG93879.1;transl_table=11 CP118132.1 Genbank gene 959160 959357 . - . ID=gene-PUW35_04540;Name=PUW35_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04540 CP118132.1 Protein Homology CDS 959160 959357 . - 0 ID=cds-WJG93880.1;Parent=gene-PUW35_04540;Dbxref=NCBI_GP:WJG93880.1;Name=WJG93880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=PUW35_04540;product=hypothetical protein;protein_id=WJG93880.1;transl_table=11 CP118132.1 Genbank gene 959519 959896 . - . ID=gene-PUW35_04545;Name=PUW35_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04545 CP118132.1 Protein Homology CDS 959519 959896 . - 0 ID=cds-WJG93881.1;Parent=gene-PUW35_04545;Dbxref=NCBI_GP:WJG93881.1;Name=WJG93881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535855.1;locus_tag=PUW35_04545;product=integrase;protein_id=WJG93881.1;transl_table=11 CP118132.1 Genbank gene 960327 960413 . - . ID=gene-PUW35_04550;Name=PUW35_04550;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_04550 CP118132.1 tRNAscan-SE tRNA 960327 960413 . - . ID=rna-PUW35_04550;Parent=gene-PUW35_04550;anticodon=(pos:complement(960377..960379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_04550;product=tRNA-Ser CP118132.1 tRNAscan-SE exon 960327 960413 . - . ID=exon-PUW35_04550-1;Parent=rna-PUW35_04550;anticodon=(pos:complement(960377..960379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_04550;product=tRNA-Ser CP118132.1 Genbank gene 960562 961239 . - . ID=gene-PUW35_04555;Name=PUW35_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04555 CP118132.1 Protein Homology CDS 960562 961239 . - 0 ID=cds-WJG93882.1;Parent=gene-PUW35_04555;Dbxref=NCBI_GP:WJG93882.1;Name=WJG93882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=PUW35_04555;product=hydrolase;protein_id=WJG93882.1;transl_table=11 CP118132.1 Genbank gene 961259 962119 . - . ID=gene-PUW35_04560;Name=PUW35_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04560 CP118132.1 Protein Homology CDS 961259 962119 . - 0 ID=cds-WJG93883.1;Parent=gene-PUW35_04560;Dbxref=NCBI_GP:WJG93883.1;Name=WJG93883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=PUW35_04560;product=pirin family protein;protein_id=WJG93883.1;transl_table=11 CP118132.1 Genbank gene 962228 963139 . + . ID=gene-PUW35_04565;Name=PUW35_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04565 CP118132.1 Protein Homology CDS 962228 963139 . + 0 ID=cds-WJG93884.1;Parent=gene-PUW35_04565;Dbxref=NCBI_GP:WJG93884.1;Name=WJG93884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=PUW35_04565;product=LysR family transcriptional regulator;protein_id=WJG93884.1;transl_table=11 CP118132.1 Genbank gene 963230 963448 . - . ID=gene-PUW35_04570;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=PUW35_04570 CP118132.1 Protein Homology CDS 963230 963448 . - 0 ID=cds-WJG93885.1;Parent=gene-PUW35_04570;Dbxref=NCBI_GP:WJG93885.1;Name=WJG93885.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=PUW35_04570;product=translation initiation factor IF-1;protein_id=WJG93885.1;transl_table=11 CP118132.1 Genbank gene 963376 963759 . - . ID=gene-PUW35_04575;Name=PUW35_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04575 CP118132.1 Protein Homology CDS 963376 963759 . - 0 ID=cds-WJG93886.1;Parent=gene-PUW35_04575;Dbxref=NCBI_GP:WJG93886.1;Name=WJG93886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459930.1;locus_tag=PUW35_04575;product=hypothetical protein;protein_id=WJG93886.1;transl_table=11 CP118132.1 Genbank gene 963760 964464 . - . ID=gene-PUW35_04580;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=PUW35_04580 CP118132.1 Protein Homology CDS 963760 964464 . - 0 ID=cds-WJG93887.1;Parent=gene-PUW35_04580;Dbxref=NCBI_GP:WJG93887.1;Name=WJG93887.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=PUW35_04580;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WJG93887.1;transl_table=11 CP118132.1 Genbank gene 964509 966230 . - . ID=gene-PUW35_04585;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=PUW35_04585 CP118132.1 Protein Homology CDS 964509 966230 . - 0 ID=cds-WJG93888.1;Parent=gene-PUW35_04585;Dbxref=NCBI_GP:WJG93888.1;Name=WJG93888.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=PUW35_04585;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WJG93888.1;transl_table=11 CP118132.1 Genbank gene 966231 967997 . - . ID=gene-PUW35_04590;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=PUW35_04590 CP118132.1 Protein Homology CDS 966231 967997 . - 0 ID=cds-WJG93889.1;Parent=gene-PUW35_04590;Dbxref=NCBI_GP:WJG93889.1;Name=WJG93889.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=PUW35_04590;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WJG93889.1;transl_table=11 CP118132.1 Genbank gene 968111 969079 . - . ID=gene-PUW35_04595;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=PUW35_04595 CP118132.1 Protein Homology CDS 968111 969079 . - 0 ID=cds-WJG93890.1;Parent=gene-PUW35_04595;Dbxref=NCBI_GP:WJG93890.1;Name=WJG93890.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=PUW35_04595;product=thioredoxin-disulfide reductase;protein_id=WJG93890.1;transl_table=11 CP118132.1 Genbank gene 969625 970119 . + . ID=gene-PUW35_04600;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=PUW35_04600 CP118132.1 Protein Homology CDS 969625 970119 . + 0 ID=cds-WJG93891.1;Parent=gene-PUW35_04600;Dbxref=NCBI_GP:WJG93891.1;Name=WJG93891.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=PUW35_04600;product=leucine-responsive transcriptional regulator Lrp;protein_id=WJG93891.1;transl_table=11 CP118132.1 Genbank gene 970254 974303 . + . ID=gene-PUW35_04605;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=PUW35_04605 CP118132.1 Protein Homology CDS 970254 974303 . + 0 ID=cds-WJG93892.1;Parent=gene-PUW35_04605;Dbxref=NCBI_GP:WJG93892.1;Name=WJG93892.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=PUW35_04605;product=DNA translocase FtsK;protein_id=WJG93892.1;transl_table=11 CP118132.1 Genbank gene 974446 975057 . + . ID=gene-PUW35_04610;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=PUW35_04610 CP118132.1 Protein Homology CDS 974446 975057 . + 0 ID=cds-WJG95027.1;Parent=gene-PUW35_04610;Dbxref=NCBI_GP:WJG95027.1;Name=WJG95027.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=PUW35_04610;product=outer membrane lipoprotein chaperone LolA;protein_id=WJG95027.1;transl_table=11 CP118132.1 Genbank gene 975067 976410 . + . ID=gene-PUW35_04615;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=PUW35_04615 CP118132.1 Protein Homology CDS 975067 976410 . + 0 ID=cds-WJG93893.1;Parent=gene-PUW35_04615;Dbxref=NCBI_GP:WJG93893.1;Name=WJG93893.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=PUW35_04615;product=replication-associated recombination protein RarA;protein_id=WJG93893.1;transl_table=11 CP118132.1 Genbank gene 976669 977961 . + . ID=gene-PUW35_04620;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=PUW35_04620 CP118132.1 Protein Homology CDS 976669 977961 . + 0 ID=cds-WJG93894.1;Parent=gene-PUW35_04620;Dbxref=NCBI_GP:WJG93894.1;Name=WJG93894.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=PUW35_04620;product=serine--tRNA ligase;protein_id=WJG93894.1;transl_table=11 CP118132.1 Genbank gene 978198 980642 . + . ID=gene-PUW35_04625;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=PUW35_04625 CP118132.1 Protein Homology CDS 978198 980642 . + 0 ID=cds-WJG93895.1;Parent=gene-PUW35_04625;Dbxref=NCBI_GP:WJG93895.1;Name=WJG93895.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=PUW35_04625;product=dimethylsulfoxide reductase subunit A;protein_id=WJG93895.1;transl_table=11 CP118132.1 Genbank gene 980653 981270 . + . ID=gene-PUW35_04630;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW35_04630 CP118132.1 Protein Homology CDS 980653 981270 . + 0 ID=cds-WJG93896.1;Parent=gene-PUW35_04630;Dbxref=NCBI_GP:WJG93896.1;Name=WJG93896.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PUW35_04630;product=dimethylsulfoxide reductase subunit B;protein_id=WJG93896.1;transl_table=11 CP118132.1 Genbank gene 981272 982135 . + . ID=gene-PUW35_04635;Name=PUW35_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04635 CP118132.1 Protein Homology CDS 981272 982135 . + 0 ID=cds-WJG93897.1;Parent=gene-PUW35_04635;Dbxref=NCBI_GP:WJG93897.1;Name=WJG93897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=PUW35_04635;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJG93897.1;transl_table=11 CP118132.1 Genbank gene 982485 983633 . + . ID=gene-PUW35_04640;Name=PUW35_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04640 CP118132.1 Protein Homology CDS 982485 983633 . + 0 ID=cds-WJG93898.1;Parent=gene-PUW35_04640;Dbxref=NCBI_GP:WJG93898.1;Name=WJG93898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=PUW35_04640;product=MFS transporter;protein_id=WJG93898.1;transl_table=11 CP118132.1 Genbank gene 983851 985272 . + . ID=gene-PUW35_04645;Name=PUW35_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04645 CP118132.1 Protein Homology CDS 983851 985272 . + 0 ID=cds-WJG93899.1;Parent=gene-PUW35_04645;Dbxref=NCBI_GP:WJG93899.1;Name=WJG93899.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=PUW35_04645;product=amino acid permease;protein_id=WJG93899.1;transl_table=11 CP118132.1 Genbank gene 985565 986362 . - . ID=gene-PUW35_04650;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=PUW35_04650 CP118132.1 Protein Homology CDS 985565 986362 . - 0 ID=cds-WJG93900.1;Parent=gene-PUW35_04650;Dbxref=NCBI_GP:WJG93900.1;Name=WJG93900.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=PUW35_04650;product=pyruvate formate lyase 1-activating protein;protein_id=WJG93900.1;transl_table=11 CP118132.1 Genbank gene 986481 986807 . - . ID=gene-PUW35_04655;Name=PUW35_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04655 CP118132.1 Protein Homology CDS 986481 986807 . - 0 ID=cds-WJG95028.1;Parent=gene-PUW35_04655;Dbxref=NCBI_GP:WJG95028.1;Name=WJG95028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=PUW35_04655;product=cytoplasmic protein;protein_id=WJG95028.1;transl_table=11 CP118132.1 Genbank gene 986937 987896 . + . ID=gene-PUW35_04660;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=PUW35_04660 CP118132.1 Protein Homology CDS 986937 987896 . + 0 ID=cds-WJG93901.1;Parent=gene-PUW35_04660;Dbxref=NCBI_GP:WJG93901.1;Name=WJG93901.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=PUW35_04660;product=SPI-2 type III secretion system effector SopD2;protein_id=WJG93901.1;transl_table=11 CP118132.1 Genbank pseudogene 987972 990253 . - . ID=gene-PUW35_04665;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=PUW35_04665;pseudo=true CP118132.1 Protein Homology CDS 987972 990253 . - 0 ID=cds-PUW35_04665;Parent=gene-PUW35_04665;Note=frameshifted;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=PUW35_04665;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 990313 991170 . - . ID=gene-PUW35_04670;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=PUW35_04670 CP118132.1 Protein Homology CDS 990313 991170 . - 0 ID=cds-WJG93902.1;Parent=gene-PUW35_04670;Dbxref=NCBI_GP:WJG93902.1;Name=WJG93902.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=PUW35_04670;product=formate transporter FocA;protein_id=WJG93902.1;transl_table=11 CP118132.1 Genbank gene 991575 993335 . - . ID=gene-PUW35_04675;Name=PUW35_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04675 CP118132.1 Protein Homology CDS 991575 993335 . - 0 ID=cds-WJG93903.1;Parent=gene-PUW35_04675;Dbxref=NCBI_GP:WJG93903.1;Name=WJG93903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=PUW35_04675;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WJG93903.1;transl_table=11 CP118132.1 Genbank gene 993472 994164 . + . ID=gene-PUW35_04680;Name=PUW35_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04680 CP118132.1 Protein Homology CDS 993472 994164 . + 0 ID=cds-WJG93904.1;Parent=gene-PUW35_04680;Dbxref=NCBI_GP:WJG93904.1;Name=WJG93904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=PUW35_04680;product=DUF421 domain-containing protein;protein_id=WJG93904.1;transl_table=11 CP118132.1 Genbank pseudogene 994350 995437 . + . ID=gene-PUW35_04685;Name=serC;gbkey=Gene;gene=serC;gene_biotype=pseudogene;locus_tag=PUW35_04685;pseudo=true CP118132.1 Protein Homology CDS 994350 995437 . + 0 ID=cds-PUW35_04685;Parent=gene-PUW35_04685;Note=frameshifted;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=PUW35_04685;product=3-phosphoserine/phosphohydroxythreonine transaminase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 995508 996790 . + . ID=gene-PUW35_04690;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=pseudogene;locus_tag=PUW35_04690;pseudo=true CP118132.1 Protein Homology CDS 995508 996790 . + 0 ID=cds-PUW35_04690;Parent=gene-PUW35_04690;Note=frameshifted;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=PUW35_04690;product=3-phosphoshikimate 1-carboxyvinyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 996933 997694 . + . ID=gene-PUW35_04695;Name=PUW35_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04695 CP118132.1 Protein Homology CDS 996933 997694 . + 0 ID=cds-WJG93905.1;Parent=gene-PUW35_04695;Dbxref=NCBI_GP:WJG93905.1;Name=WJG93905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=PUW35_04695;product=M48 family metallopeptidase;protein_id=WJG93905.1;transl_table=11 CP118132.1 Genbank gene 997867 998550 . + . ID=gene-PUW35_04700;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=PUW35_04700 CP118132.1 Protein Homology CDS 997867 998550 . + 0 ID=cds-WJG93906.1;Parent=gene-PUW35_04700;Dbxref=NCBI_GP:WJG93906.1;Name=WJG93906.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=PUW35_04700;product=(d)CMP kinase;protein_id=WJG93906.1;transl_table=11 CP118132.1 Genbank gene 998664 1000337 . + . ID=gene-PUW35_04705;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=PUW35_04705 CP118132.1 Protein Homology CDS 998664 1000337 . + 0 ID=cds-WJG93907.1;Parent=gene-PUW35_04705;Dbxref=NCBI_GP:WJG93907.1;Name=WJG93907.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=PUW35_04705;product=30S ribosomal protein S1;protein_id=WJG93907.1;transl_table=11 CP118132.1 Genbank gene 1000493 1000777 . + . ID=gene-PUW35_04710;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=PUW35_04710 CP118132.1 Protein Homology CDS 1000493 1000777 . + 0 ID=cds-WJG93908.1;Parent=gene-PUW35_04710;Dbxref=NCBI_GP:WJG93908.1;Name=WJG93908.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=PUW35_04710;product=integration host factor subunit beta;protein_id=WJG93908.1;transl_table=11 CP118132.1 Genbank gene 1001007 1003271 . + . ID=gene-PUW35_04715;Name=PUW35_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04715 CP118132.1 Protein Homology CDS 1001007 1003271 . + 0 ID=cds-WJG93909.1;Parent=gene-PUW35_04715;Dbxref=NCBI_GP:WJG93909.1;Name=WJG93909.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=PUW35_04715;product=ComEC family protein;protein_id=WJG93909.1;transl_table=11 CP118132.1 Genbank gene 1003308 1005056 . + . ID=gene-PUW35_04720;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=PUW35_04720 CP118132.1 Protein Homology CDS 1003308 1005056 . + 0 ID=cds-WJG93910.1;Parent=gene-PUW35_04720;Dbxref=NCBI_GP:WJG93910.1;Name=WJG93910.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=PUW35_04720;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WJG93910.1;transl_table=11 CP118132.1 Genbank gene 1005053 1006030 . + . ID=gene-PUW35_04725;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=PUW35_04725 CP118132.1 Protein Homology CDS 1005053 1006030 . + 0 ID=cds-WJG93911.1;Parent=gene-PUW35_04725;Dbxref=NCBI_GP:WJG93911.1;Name=WJG93911.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=PUW35_04725;product=tetraacyldisaccharide 4'-kinase;protein_id=WJG93911.1;transl_table=11 CP118132.1 Genbank gene 1006079 1007305 . + . ID=gene-PUW35_04730;Name=PUW35_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04730 CP118132.1 Protein Homology CDS 1006079 1007305 . + 0 ID=cds-WJG95029.1;Parent=gene-PUW35_04730;Dbxref=NCBI_GP:WJG95029.1;Name=WJG95029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=PUW35_04730;product=winged helix-turn-helix domain-containing protein;protein_id=WJG95029.1;transl_table=11 CP118132.1 Genbank gene 1007357 1007539 . + . ID=gene-PUW35_04735;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=PUW35_04735 CP118132.1 Protein Homology CDS 1007357 1007539 . + 0 ID=cds-WJG93912.1;Parent=gene-PUW35_04735;Dbxref=NCBI_GP:WJG93912.1;Name=WJG93912.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=PUW35_04735;product=protein YcaR;protein_id=WJG93912.1;transl_table=11 CP118132.1 Genbank gene 1007536 1008282 . + . ID=gene-PUW35_04740;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=PUW35_04740 CP118132.1 Protein Homology CDS 1007536 1008282 . + 0 ID=cds-WJG93913.1;Parent=gene-PUW35_04740;Dbxref=NCBI_GP:WJG93913.1;Name=WJG93913.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=PUW35_04740;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WJG93913.1;transl_table=11 CP118132.1 Genbank gene 1008493 1009386 . + . ID=gene-PUW35_04745;Name=PUW35_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04745 CP118132.1 Protein Homology CDS 1008493 1009386 . + 0 ID=cds-WJG93914.1;Parent=gene-PUW35_04745;Dbxref=NCBI_GP:WJG93914.1;Name=WJG93914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=PUW35_04745;product=YcbJ family phosphotransferase;protein_id=WJG93914.1;transl_table=11 CP118132.1 Genbank gene 1009366 1010142 . - . ID=gene-PUW35_04750;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=PUW35_04750 CP118132.1 Protein Homology CDS 1009366 1010142 . - 0 ID=cds-WJG93915.1;Parent=gene-PUW35_04750;Dbxref=NCBI_GP:WJG93915.1;Name=WJG93915.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=PUW35_04750;product=envelope biogenesis factor ElyC;protein_id=WJG93915.1;transl_table=11 CP118132.1 Genbank pseudogene 1010278 1011080 . + . ID=gene-PUW35_04755;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=pseudogene;locus_tag=PUW35_04755;pseudo=true CP118132.1 Protein Homology CDS 1010278 1011080 . + 0 ID=cds-PUW35_04755;Parent=gene-PUW35_04755;Note=frameshifted;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=PUW35_04755;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1011073 1012395 . + . ID=gene-PUW35_04760;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=PUW35_04760 CP118132.1 Protein Homology CDS 1011073 1012395 . + 0 ID=cds-WJG93916.1;Parent=gene-PUW35_04760;Dbxref=NCBI_GP:WJG93916.1;Name=WJG93916.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=PUW35_04760;product=chromosome partition protein MukF;protein_id=WJG93916.1;transl_table=11 CP118132.1 Genbank gene 1012376 1013080 . + . ID=gene-PUW35_04765;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=PUW35_04765 CP118132.1 Protein Homology CDS 1012376 1013080 . + 0 ID=cds-WJG93917.1;Parent=gene-PUW35_04765;Dbxref=NCBI_GP:WJG93917.1;Name=WJG93917.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=PUW35_04765;product=chromosome partition protein MukE;protein_id=WJG93917.1;transl_table=11 CP118132.1 Genbank gene 1013080 1017546 . + . ID=gene-PUW35_04770;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=PUW35_04770 CP118132.1 Protein Homology CDS 1013080 1017546 . + 0 ID=cds-WJG93918.1;Parent=gene-PUW35_04770;Dbxref=NCBI_GP:WJG93918.1;Name=WJG93918.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=PUW35_04770;product=chromosome partition protein MukB;protein_id=WJG93918.1;transl_table=11 CP118132.1 Genbank gene 1017891 1019741 . + . ID=gene-PUW35_04775;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=PUW35_04775 CP118132.1 Protein Homology CDS 1017891 1019741 . + 0 ID=cds-WJG93919.1;Parent=gene-PUW35_04775;Dbxref=NCBI_GP:WJG93919.1;Name=WJG93919.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=PUW35_04775;product=L%2CD-transpeptidase;protein_id=WJG93919.1;transl_table=11 CP118132.1 Genbank gene 1020001 1020549 . + . ID=gene-PUW35_04780;Name=PUW35_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04780 CP118132.1 Protein Homology CDS 1020001 1020549 . + 0 ID=cds-WJG93920.1;Parent=gene-PUW35_04780;Dbxref=NCBI_GP:WJG93920.1;Name=WJG93920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=PUW35_04780;product=YcbK family protein;protein_id=WJG93920.1;transl_table=11 CP118132.1 Genbank gene 1020577 1021224 . + . ID=gene-PUW35_04785;Name=PUW35_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04785 CP118132.1 Protein Homology CDS 1020577 1021224 . + 0 ID=cds-WJG93921.1;Parent=gene-PUW35_04785;Dbxref=NCBI_GP:WJG93921.1;Name=WJG93921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=PUW35_04785;product=MBL fold metallo-hydrolase;protein_id=WJG93921.1;transl_table=11 CP118132.1 Genbank pseudogene 1021286 1022475 . - . ID=gene-PUW35_04790;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=pseudogene;locus_tag=PUW35_04790;pseudo=true CP118132.1 Protein Homology CDS 1021286 1022475 . - 0 ID=cds-PUW35_04790;Parent=gene-PUW35_04790;Note=frameshifted;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=PUW35_04790;product=aspartate transaminase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1022660 1023751 . - . ID=gene-PUW35_04795;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=PUW35_04795 CP118132.1 Protein Homology CDS 1022660 1023751 . - 0 ID=cds-WJG93922.1;Parent=gene-PUW35_04795;Dbxref=NCBI_GP:WJG93922.1;Name=WJG93922.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=PUW35_04795;product=porin OmpF;protein_id=WJG93922.1;transl_table=11 CP118132.1 Genbank gene 1024345 1025745 . - . ID=gene-PUW35_04800;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=PUW35_04800 CP118132.1 Protein Homology CDS 1024345 1025745 . - 0 ID=cds-WJG93923.1;Parent=gene-PUW35_04800;Dbxref=NCBI_GP:WJG93923.1;Name=WJG93923.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=PUW35_04800;product=asparagine--tRNA ligase;protein_id=WJG93923.1;transl_table=11 CP118132.1 Genbank gene 1025946 1026407 . - . ID=gene-PUW35_04805;Name=PUW35_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04805 CP118132.1 Protein Homology CDS 1025946 1026407 . - 0 ID=cds-WJG93924.1;Parent=gene-PUW35_04805;Dbxref=NCBI_GP:WJG93924.1;Name=WJG93924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=PUW35_04805;product=Lrp/AsnC family transcriptional regulator;protein_id=WJG93924.1;transl_table=11 CP118132.1 Genbank gene 1026725 1027939 . + . ID=gene-PUW35_04810;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=PUW35_04810 CP118132.1 Protein Homology CDS 1026725 1027939 . + 0 ID=cds-WJG93925.1;Parent=gene-PUW35_04810;Dbxref=NCBI_GP:WJG93925.1;Name=WJG93925.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=PUW35_04810;product=diaminopropionate ammonia-lyase;protein_id=WJG93925.1;transl_table=11 CP118132.1 Genbank gene 1028183 1029619 . + . ID=gene-PUW35_04815;Name=PUW35_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04815 CP118132.1 Protein Homology CDS 1028183 1029619 . + 0 ID=cds-WJG93926.1;Parent=gene-PUW35_04815;Dbxref=NCBI_GP:WJG93926.1;Name=WJG93926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459978.1;locus_tag=PUW35_04815;product=sodium:alanine symporter family protein;protein_id=WJG93926.1;transl_table=11 CP118132.1 Genbank gene 1029697 1030899 . - . ID=gene-PUW35_04820;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=PUW35_04820 CP118132.1 Protein Homology CDS 1029697 1030899 . - 0 ID=cds-WJG93927.1;Parent=gene-PUW35_04820;Dbxref=NCBI_GP:WJG93927.1;Name=WJG93927.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=PUW35_04820;product=nicotinate phosphoribosyltransferase;protein_id=WJG93927.1;transl_table=11 CP118132.1 Genbank gene 1031166 1033778 . + . ID=gene-PUW35_04825;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=PUW35_04825 CP118132.1 Protein Homology CDS 1031166 1033778 . + 0 ID=cds-WJG93928.1;Parent=gene-PUW35_04825;Dbxref=NCBI_GP:WJG93928.1;Name=WJG93928.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=PUW35_04825;product=aminopeptidase N;protein_id=WJG93928.1;transl_table=11 CP118132.1 Genbank gene 1033986 1034996 . + . ID=gene-PUW35_04830;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=PUW35_04830 CP118132.1 Protein Homology CDS 1033986 1034996 . + 0 ID=cds-WJG93929.1;Parent=gene-PUW35_04830;Dbxref=NCBI_GP:WJG93929.1;Name=WJG93929.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=PUW35_04830;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WJG93929.1;transl_table=11 CP118132.1 Genbank gene 1035162 1035704 . + . ID=gene-PUW35_04835;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=PUW35_04835 CP118132.1 Protein Homology CDS 1035162 1035704 . + 0 ID=cds-WJG93930.1;Parent=gene-PUW35_04835;Dbxref=NCBI_GP:WJG93930.1;Name=WJG93930.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=PUW35_04835;product=cell division protein ZapC;protein_id=WJG93930.1;transl_table=11 CP118132.1 Genbank gene 1035701 1036810 . - . ID=gene-PUW35_04840;Name=PUW35_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04840 CP118132.1 Protein Homology CDS 1035701 1036810 . - 0 ID=cds-WJG93931.1;Parent=gene-PUW35_04840;Dbxref=NCBI_GP:WJG93931.1;Name=WJG93931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=PUW35_04840;product=YcbX family protein;protein_id=WJG93931.1;transl_table=11 CP118132.1 Genbank gene 1036909 1039017 . + . ID=gene-PUW35_04845;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=PUW35_04845 CP118132.1 Protein Homology CDS 1036909 1039017 . + 0 ID=cds-WJG93932.1;Parent=gene-PUW35_04845;Dbxref=NCBI_GP:WJG93932.1;Name=WJG93932.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=PUW35_04845;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WJG93932.1;transl_table=11 CP118132.1 Genbank pseudogene 1039030 1040957 . + . ID=gene-PUW35_04850;Name=PUW35_04850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04850;pseudo=true CP118132.1 Protein Homology CDS 1039030 1040957 . + 0 ID=cds-PUW35_04850;Parent=gene-PUW35_04850;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226158.1;locus_tag=PUW35_04850;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1040950 1042203 . + . ID=gene-PUW35_04855;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=PUW35_04855 CP118132.1 Protein Homology CDS 1040950 1042203 . + 0 ID=cds-WJG93933.1;Parent=gene-PUW35_04855;Dbxref=NCBI_GP:WJG93933.1;Name=WJG93933.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=PUW35_04855;product=membrane integrity-associated transporter subunit PqiA;protein_id=WJG93933.1;transl_table=11 CP118132.1 Genbank gene 1042208 1043848 . + . ID=gene-PUW35_04860;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=PUW35_04860 CP118132.1 Protein Homology CDS 1042208 1043848 . + 0 ID=cds-WJG93934.1;Parent=gene-PUW35_04860;Dbxref=NCBI_GP:WJG93934.1;Name=WJG93934.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=PUW35_04860;product=intermembrane transport protein PqiB;protein_id=WJG93934.1;transl_table=11 CP118132.1 Genbank gene 1043845 1044408 . + . ID=gene-PUW35_04865;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=PUW35_04865 CP118132.1 Protein Homology CDS 1043845 1044408 . + 0 ID=cds-WJG93935.1;Parent=gene-PUW35_04865;Dbxref=NCBI_GP:WJG93935.1;Name=WJG93935.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=PUW35_04865;product=membrane integrity-associated transporter subunit PqiC;protein_id=WJG93935.1;transl_table=11 CP118132.1 Genbank gene 1044664 1044831 . + . ID=gene-PUW35_04870;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=PUW35_04870 CP118132.1 Protein Homology CDS 1044664 1044831 . + 0 ID=cds-WJG93936.1;Parent=gene-PUW35_04870;Dbxref=NCBI_GP:WJG93936.1;Name=WJG93936.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=PUW35_04870;product=ribosome modulation factor;protein_id=WJG93936.1;transl_table=11 CP118132.1 Genbank gene 1044931 1045449 . - . ID=gene-PUW35_04875;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=PUW35_04875 CP118132.1 Protein Homology CDS 1044931 1045449 . - 0 ID=cds-WJG93937.1;Parent=gene-PUW35_04875;Dbxref=NCBI_GP:WJG93937.1;Name=WJG93937.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=PUW35_04875;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WJG93937.1;transl_table=11 CP118132.1 Genbank gene 1045518 1047278 . - . ID=gene-PUW35_04880;Name=PUW35_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04880 CP118132.1 Protein Homology CDS 1045518 1047278 . - 0 ID=cds-WJG93938.1;Parent=gene-PUW35_04880;Dbxref=NCBI_GP:WJG93938.1;Name=WJG93938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=PUW35_04880;product=Lon protease family protein;protein_id=WJG93938.1;transl_table=11 CP118132.1 Genbank gene 1047464 1047916 . + . ID=gene-PUW35_04885;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=PUW35_04885 CP118132.1 Protein Homology CDS 1047464 1047916 . + 0 ID=cds-WJG93939.1;Parent=gene-PUW35_04885;Dbxref=NCBI_GP:WJG93939.1;Name=WJG93939.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=PUW35_04885;product=macrodomain Ter protein MatP;protein_id=WJG93939.1;transl_table=11 CP118132.1 Genbank gene 1047988 1049040 . - . ID=gene-PUW35_04890;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=PUW35_04890 CP118132.1 Protein Homology CDS 1047988 1049040 . - 0 ID=cds-WJG93940.1;Parent=gene-PUW35_04890;Dbxref=NCBI_GP:WJG93940.1;Name=WJG93940.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=PUW35_04890;product=porin OmpA;protein_id=WJG93940.1;transl_table=11 CP118132.1 Genbank gene 1049397 1049906 . - . ID=gene-PUW35_04895;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=PUW35_04895 CP118132.1 Protein Homology CDS 1049397 1049906 . - 0 ID=cds-WJG93941.1;Parent=gene-PUW35_04895;Dbxref=NCBI_GP:WJG93941.1;Name=WJG93941.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=PUW35_04895;product=cell division inhibitor SulA;protein_id=WJG93941.1;transl_table=11 CP118132.1 Genbank gene 1050123 1050728 . + . ID=gene-PUW35_04900;Name=PUW35_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04900 CP118132.1 Protein Homology CDS 1050123 1050728 . + 0 ID=cds-WJG93942.1;Parent=gene-PUW35_04900;Dbxref=NCBI_GP:WJG93942.1;Name=WJG93942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=PUW35_04900;product=TfoX/Sxy family DNA transformation protein;protein_id=WJG93942.1;transl_table=11 CP118132.1 Genbank gene 1050715 1052868 . - . ID=gene-PUW35_04905;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=PUW35_04905 CP118132.1 Protein Homology CDS 1050715 1052868 . - 0 ID=cds-WJG93943.1;Parent=gene-PUW35_04905;Dbxref=NCBI_GP:WJG93943.1;Name=WJG93943.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=PUW35_04905;product=YccS family putative transporter;protein_id=WJG93943.1;transl_table=11 CP118132.1 Genbank gene 1052887 1053333 . - . ID=gene-PUW35_04910;Name=PUW35_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04910 CP118132.1 Protein Homology CDS 1052887 1053333 . - 0 ID=cds-WJG93944.1;Parent=gene-PUW35_04910;Dbxref=NCBI_GP:WJG93944.1;Name=WJG93944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=PUW35_04910;product=YccF domain-containing protein;protein_id=WJG93944.1;transl_table=11 CP118132.1 Genbank gene 1053457 1055511 . + . ID=gene-PUW35_04915;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=PUW35_04915 CP118132.1 Protein Homology CDS 1053457 1055511 . + 0 ID=cds-WJG93945.1;Parent=gene-PUW35_04915;Dbxref=NCBI_GP:WJG93945.1;Name=WJG93945.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=PUW35_04915;product=DNA helicase IV;protein_id=WJG93945.1;transl_table=11 CP118132.1 Genbank gene 1055547 1056005 . - . ID=gene-PUW35_04920;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=PUW35_04920 CP118132.1 Protein Homology CDS 1055547 1056005 . - 0 ID=cds-WJG93946.1;Parent=gene-PUW35_04920;Dbxref=NCBI_GP:WJG93946.1;Name=WJG93946.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=PUW35_04920;product=methylglyoxal synthase;protein_id=WJG93946.1;transl_table=11 CP118132.1 Genbank pseudogene 1056030 1056434 . - . ID=gene-PUW35_04925;Name=PUW35_04925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04925;pseudo=true CP118132.1 Protein Homology CDS 1056030 1056434 . - 0 ID=cds-PUW35_04925;Parent=gene-PUW35_04925;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021358.2;locus_tag=PUW35_04925;product=DUF2057 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1056377 1056760 . - . ID=gene-PUW35_04930;Name=PUW35_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04930 CP118132.1 Protein Homology CDS 1056377 1056760 . - 0 ID=cds-WJG93947.1;Parent=gene-PUW35_04930;Dbxref=NCBI_GP:WJG93947.1;Name=WJG93947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF002967.0;locus_tag=PUW35_04930;product=DUF2057 family protein;protein_id=WJG93947.1;transl_table=11 CP118132.1 Genbank gene 1056934 1057347 . + . ID=gene-PUW35_04935;Name=PUW35_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04935 CP118132.1 Protein Homology CDS 1056934 1057347 . + 0 ID=cds-WJG95030.1;Parent=gene-PUW35_04935;Dbxref=NCBI_GP:WJG95030.1;Name=WJG95030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=PUW35_04935;product=CoA-binding protein;protein_id=WJG95030.1;transl_table=11 CP118132.1 Genbank gene 1057392 1057709 . - . ID=gene-PUW35_04940;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=PUW35_04940 CP118132.1 Protein Homology CDS 1057392 1057709 . - 0 ID=cds-WJG93948.1;Parent=gene-PUW35_04940;Dbxref=NCBI_GP:WJG93948.1;Name=WJG93948.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=PUW35_04940;product=heat shock protein HspQ;protein_id=WJG93948.1;transl_table=11 CP118132.1 Genbank pseudogene 1057767 1058977 . - . ID=gene-PUW35_04945;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=pseudogene;locus_tag=PUW35_04945;pseudo=true CP118132.1 Protein Homology CDS 1057767 1058977 . - 0 ID=cds-PUW35_04945;Parent=gene-PUW35_04945;Note=frameshifted;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=PUW35_04945;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1059192 1059739 . + . ID=gene-PUW35_04950;Name=PUW35_04950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_04950;pseudo=true CP118132.1 Protein Homology CDS 1059192 1059739 . + 0 ID=cds-PUW35_04950;Parent=gene-PUW35_04950;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=PUW35_04950;product=YbhB/YbcL family Raf kinase inhibitor-like protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1059765 1060544 . + . ID=gene-PUW35_04955;Name=PUW35_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04955 CP118132.1 Protein Homology CDS 1059765 1060544 . + 0 ID=cds-WJG93949.1;Parent=gene-PUW35_04955;Dbxref=NCBI_GP:WJG93949.1;Name=WJG93949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=PUW35_04955;product=AraC family transcriptional regulator;protein_id=WJG93949.1;transl_table=11 CP118132.1 Genbank gene 1060593 1060874 . + . ID=gene-PUW35_04960;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=PUW35_04960 CP118132.1 Protein Homology CDS 1060593 1060874 . + 0 ID=cds-WJG93950.1;Parent=gene-PUW35_04960;Dbxref=NCBI_GP:WJG93950.1;Name=WJG93950.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=PUW35_04960;product=acylphosphatase;protein_id=WJG93950.1;transl_table=11 CP118132.1 Genbank gene 1060871 1061200 . - . ID=gene-PUW35_04965;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=PUW35_04965 CP118132.1 Protein Homology CDS 1060871 1061200 . - 0 ID=cds-WJG93951.1;Parent=gene-PUW35_04965;Dbxref=NCBI_GP:WJG93951.1;Name=WJG93951.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=PUW35_04965;product=sulfurtransferase TusE;protein_id=WJG93951.1;transl_table=11 CP118132.1 Genbank gene 1061287 1061946 . - . ID=gene-PUW35_04970;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=PUW35_04970 CP118132.1 Protein Homology CDS 1061287 1061946 . - 0 ID=cds-WJG93952.1;Parent=gene-PUW35_04970;Dbxref=NCBI_GP:WJG93952.1;Name=WJG93952.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=PUW35_04970;product=FtsH protease modulator YccA;protein_id=WJG93952.1;transl_table=11 CP118132.1 Genbank gene 1062341 1062428 . + . ID=gene-PUW35_04975;Name=PUW35_04975;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_04975 CP118132.1 tRNAscan-SE tRNA 1062341 1062428 . + . ID=rna-PUW35_04975;Parent=gene-PUW35_04975;anticodon=(pos:1062375..1062377);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_04975;product=tRNA-Ser CP118132.1 tRNAscan-SE exon 1062341 1062428 . + . ID=exon-PUW35_04975-1;Parent=rna-PUW35_04975;anticodon=(pos:1062375..1062377);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_04975;product=tRNA-Ser CP118132.1 Genbank gene 1062565 1063245 . - . ID=gene-PUW35_04980;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=PUW35_04980 CP118132.1 Protein Homology CDS 1062565 1063245 . - 0 ID=cds-WJG93953.1;Parent=gene-PUW35_04980;Dbxref=NCBI_GP:WJG93953.1;Name=WJG93953.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=PUW35_04980;product=type III secretion system effector protease PipA;protein_id=WJG93953.1;transl_table=11 CP118132.1 Genbank gene 1063465 1064340 . - . ID=gene-PUW35_04985;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=PUW35_04985 CP118132.1 Protein Homology CDS 1063465 1064340 . - 0 ID=cds-WJG93954.1;Parent=gene-PUW35_04985;Dbxref=NCBI_GP:WJG93954.1;Name=WJG93954.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=PUW35_04985;product=SPI-2 type III secretion system effector PipB;protein_id=WJG93954.1;transl_table=11 CP118132.1 Genbank gene 1064558 1064878 . + . ID=gene-PUW35_04990;Name=PUW35_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_04990 CP118132.1 Protein Homology CDS 1064558 1064878 . + 0 ID=cds-WJG93955.1;Parent=gene-PUW35_04990;Dbxref=NCBI_GP:WJG93955.1;Name=WJG93955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=PUW35_04990;product=hypothetical protein;protein_id=WJG93955.1;transl_table=11 CP118132.1 Genbank gene 1064888 1065229 . - . ID=gene-PUW35_04995;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=PUW35_04995 CP118132.1 Protein Homology CDS 1064888 1065229 . - 0 ID=cds-WJG93956.1;Parent=gene-PUW35_04995;Dbxref=NCBI_GP:WJG93956.1;Name=WJG93956.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=PUW35_04995;product=type III secretion system chaperone SigE;protein_id=WJG93956.1;transl_table=11 CP118132.1 Genbank gene 1065246 1066931 . - . ID=gene-PUW35_05000;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=PUW35_05000 CP118132.1 Protein Homology CDS 1065246 1066931 . - 0 ID=cds-WJG93957.1;Parent=gene-PUW35_05000;Dbxref=NCBI_GP:WJG93957.1;Name=WJG93957.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=PUW35_05000;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WJG93957.1;transl_table=11 CP118132.1 Genbank gene 1067263 1067433 . + . ID=gene-PUW35_05005;Name=PUW35_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05005 CP118132.1 Protein Homology CDS 1067263 1067433 . + 0 ID=cds-WJG93958.1;Parent=gene-PUW35_05005;Dbxref=NCBI_GP:WJG93958.1;Name=WJG93958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=PUW35_05005;product=YlcI/YnfO family protein;protein_id=WJG93958.1;transl_table=11 CP118132.1 Genbank gene 1067434 1067544 . - . ID=gene-PUW35_05010;Name=PUW35_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05010 CP118132.1 Protein Homology CDS 1067434 1067544 . - 0 ID=cds-WJG93959.1;Parent=gene-PUW35_05010;Dbxref=NCBI_GP:WJG93959.1;Name=WJG93959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=PUW35_05010;product=hypothetical protein;protein_id=WJG93959.1;transl_table=11 CP118132.1 Genbank gene 1067653 1069122 . - . ID=gene-PUW35_05015;Name=PUW35_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05015 CP118132.1 Protein Homology CDS 1067653 1069122 . - 0 ID=cds-WJG93960.1;Parent=gene-PUW35_05015;Dbxref=NCBI_GP:WJG93960.1;Name=WJG93960.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=PUW35_05015;product=C69 family dipeptidase;protein_id=WJG93960.1;transl_table=11 CP118132.1 Genbank gene 1069295 1070659 . - . ID=gene-PUW35_05020;Name=PUW35_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05020 CP118132.1 Protein Homology CDS 1069295 1070659 . - 0 ID=cds-WJG93961.1;Parent=gene-PUW35_05020;Dbxref=NCBI_GP:WJG93961.1;Name=WJG93961.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=PUW35_05020;product=heavy metal sensor histidine kinase;protein_id=WJG93961.1;transl_table=11 CP118132.1 Genbank gene 1070652 1071332 . - . ID=gene-PUW35_05025;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=PUW35_05025 CP118132.1 Protein Homology CDS 1070652 1071332 . - 0 ID=cds-WJG93962.1;Parent=gene-PUW35_05025;Dbxref=NCBI_GP:WJG93962.1;Name=WJG93962.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=PUW35_05025;product=response regulator transcription factor HprR;protein_id=WJG93962.1;transl_table=11 CP118132.1 Genbank gene 1071468 1071878 . + . ID=gene-PUW35_05030;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=PUW35_05030 CP118132.1 Protein Homology CDS 1071468 1071878 . + 0 ID=cds-WJG93963.1;Parent=gene-PUW35_05030;Dbxref=NCBI_GP:WJG93963.1;Name=WJG93963.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=PUW35_05030;product=hydroxyisourate hydrolase;protein_id=WJG93963.1;transl_table=11 CP118132.1 Genbank gene 1072211 1072723 . - . ID=gene-PUW35_05035;Name=PUW35_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05035 CP118132.1 Protein Homology CDS 1072211 1072723 . - 0 ID=cds-WJG93964.1;Parent=gene-PUW35_05035;Dbxref=NCBI_GP:WJG93964.1;Name=WJG93964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=PUW35_05035;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WJG93964.1;transl_table=11 CP118132.1 Genbank gene 1072741 1074303 . - . ID=gene-PUW35_05040;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=PUW35_05040 CP118132.1 Protein Homology CDS 1072741 1074303 . - 0 ID=cds-WJG93965.1;Parent=gene-PUW35_05040;Dbxref=NCBI_GP:WJG93965.1;Name=WJG93965.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=PUW35_05040;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WJG93965.1;transl_table=11 CP118132.1 Genbank gene 1074521 1074961 . - . ID=gene-PUW35_05045;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=PUW35_05045 CP118132.1 Protein Homology CDS 1074521 1074961 . - 0 ID=cds-WJG93966.1;Parent=gene-PUW35_05045;Dbxref=NCBI_GP:WJG93966.1;Name=WJG93966.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=PUW35_05045;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WJG93966.1;transl_table=11 CP118132.1 Genbank gene 1075236 1076525 . + . ID=gene-PUW35_05050;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=PUW35_05050 CP118132.1 Protein Homology CDS 1075236 1076525 . + 0 ID=cds-WJG93967.1;Parent=gene-PUW35_05050;Dbxref=NCBI_GP:WJG93967.1;Name=WJG93967.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=PUW35_05050;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WJG93967.1;transl_table=11 CP118132.1 Genbank pseudogene 1076522 1077987 . + . ID=gene-PUW35_05055;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=pseudogene;locus_tag=PUW35_05055;pseudo=true CP118132.1 Protein Homology CDS 1076522 1077987 . + 0 ID=cds-PUW35_05055;Parent=gene-PUW35_05055;Note=frameshifted;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=PUW35_05055;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1077989 1078840 . + . ID=gene-PUW35_05060;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=PUW35_05060 CP118132.1 Protein Homology CDS 1077989 1078840 . + 0 ID=cds-WJG93968.1;Parent=gene-PUW35_05060;Dbxref=NCBI_GP:WJG93968.1;Name=WJG93968.1;Ontology_term=GO:0006725,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=PUW35_05060;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WJG93968.1;transl_table=11 CP118132.1 Genbank gene 1078850 1079230 . + . ID=gene-PUW35_05065;Name=PUW35_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05065 CP118132.1 Protein Homology CDS 1078850 1079230 . + 0 ID=cds-WJG93969.1;Parent=gene-PUW35_05065;Dbxref=NCBI_GP:WJG93969.1;Name=WJG93969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=PUW35_05065;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WJG93969.1;transl_table=11 CP118132.1 Genbank pseudogene 1079373 1080175 . + . ID=gene-PUW35_05070;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=pseudogene;locus_tag=PUW35_05070;pseudo=true CP118132.1 Protein Homology CDS 1079373 1080175 . + 0 ID=cds-PUW35_05070;Parent=gene-PUW35_05070;Note=frameshifted;Ontology_term=GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=PUW35_05070;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1080186 1080977 . + . ID=gene-PUW35_05075;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=PUW35_05075 CP118132.1 Protein Homology CDS 1080186 1080977 . + 0 ID=cds-WJG93970.1;Parent=gene-PUW35_05075;Dbxref=NCBI_GP:WJG93970.1;Name=WJG93970.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=PUW35_05075;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WJG93970.1;transl_table=11 CP118132.1 Genbank gene 1081049 1082425 . + . ID=gene-PUW35_05080;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=PUW35_05080 CP118132.1 Protein Homology CDS 1081049 1082425 . + 0 ID=cds-WJG93971.1;Parent=gene-PUW35_05080;Dbxref=NCBI_GP:WJG93971.1;Name=WJG93971.1;Ontology_term=GO:0055085,GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=transmembrane transport|0055085||IEA,4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=PUW35_05080;product=4-hydroxyphenylacetate permease;protein_id=WJG93971.1;transl_table=11 CP118132.1 Genbank pseudogene 1082435 1083330 . + . ID=gene-PUW35_05085;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=pseudogene;locus_tag=PUW35_05085;pseudo=true CP118132.1 Protein Homology CDS 1082435 1083330 . + 0 ID=cds-PUW35_05085;Parent=gene-PUW35_05085;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=PUW35_05085;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1083344 1084282 . + . ID=gene-PUW35_05090;Name=PUW35_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05090 CP118132.1 Protein Homology CDS 1083344 1084282 . + 0 ID=cds-WJG93972.1;Parent=gene-PUW35_05090;Dbxref=NCBI_GP:WJG93972.1;Name=WJG93972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=PUW35_05090;product=MBL fold metallo-hydrolase;protein_id=WJG93972.1;transl_table=11 CP118132.1 Genbank gene 1084690 1085052 . - . ID=gene-PUW35_05095;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=PUW35_05095 CP118132.1 Protein Homology CDS 1084690 1085052 . - 0 ID=cds-WJG93973.1;Parent=gene-PUW35_05095;Dbxref=NCBI_GP:WJG93973.1;Name=WJG93973.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=PUW35_05095;product=anti-adapter protein IraM;protein_id=WJG93973.1;transl_table=11 CP118132.1 Genbank gene 1085706 1086011 . - . ID=gene-PUW35_05100;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=PUW35_05100 CP118132.1 Protein Homology CDS 1085706 1086011 . - 0 ID=cds-WJG93974.1;Parent=gene-PUW35_05100;Dbxref=NCBI_GP:WJG93974.1;Name=WJG93974.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=PUW35_05100;product=chaperone modulator CbpM;protein_id=WJG93974.1;transl_table=11 CP118132.1 Genbank gene 1086011 1086931 . - . ID=gene-PUW35_05105;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=PUW35_05105 CP118132.1 Protein Homology CDS 1086011 1086931 . - 0 ID=cds-WJG93975.1;Parent=gene-PUW35_05105;Dbxref=NCBI_GP:WJG93975.1;Name=WJG93975.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=PUW35_05105;product=curved DNA-binding protein;protein_id=WJG93975.1;transl_table=11 CP118132.1 Genbank gene 1087167 1087529 . + . ID=gene-PUW35_05110;Name=PUW35_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05110 CP118132.1 Protein Homology CDS 1087167 1087529 . + 0 ID=cds-WJG93976.1;Parent=gene-PUW35_05110;Dbxref=NCBI_GP:WJG93976.1;Name=WJG93976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=PUW35_05110;product=copper resistance protein;protein_id=WJG93976.1;transl_table=11 CP118132.1 Genbank gene 1087578 1089464 . + . ID=gene-PUW35_05115;Name=PUW35_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05115 CP118132.1 Protein Homology CDS 1087578 1089464 . + 0 ID=cds-WJG93977.1;Parent=gene-PUW35_05115;Dbxref=NCBI_GP:WJG93977.1;Name=WJG93977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=PUW35_05115;product=protein-disulfide reductase DsbD family protein;protein_id=WJG93977.1;transl_table=11 CP118132.1 Genbank gene 1089461 1090084 . + . ID=gene-PUW35_05120;Name=PUW35_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05120 CP118132.1 Protein Homology CDS 1089461 1090084 . + 0 ID=cds-WJG93978.1;Parent=gene-PUW35_05120;Dbxref=NCBI_GP:WJG93978.1;Name=WJG93978.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=PUW35_05120;product=DsbA family protein;protein_id=WJG93978.1;transl_table=11 CP118132.1 Genbank gene 1090074 1090580 . + . ID=gene-PUW35_05125;Name=PUW35_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05125 CP118132.1 Protein Homology CDS 1090074 1090580 . + 0 ID=cds-WJG93979.1;Parent=gene-PUW35_05125;Dbxref=NCBI_GP:WJG93979.1;Name=WJG93979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=PUW35_05125;product=protein disulfide oxidoreductase;protein_id=WJG93979.1;transl_table=11 CP118132.1 Genbank gene 1090713 1091954 . + . ID=gene-PUW35_05130;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=PUW35_05130 CP118132.1 Protein Homology CDS 1090713 1091954 . + 0 ID=cds-WJG93980.1;Parent=gene-PUW35_05130;Dbxref=NCBI_GP:WJG93980.1;Name=WJG93980.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=PUW35_05130;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WJG93980.1;transl_table=11 CP118132.1 Genbank pseudogene 1091988 1092214 . - . ID=gene-PUW35_05135;Name=PUW35_05135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05135;pseudo=true CP118132.1 Protein Homology CDS 1091988 1092214 . - 0 ID=cds-PUW35_05135;Parent=gene-PUW35_05135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=PUW35_05135;product=YccJ family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1092235 1092831 . - . ID=gene-PUW35_05140;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=PUW35_05140 CP118132.1 Protein Homology CDS 1092235 1092831 . - 0 ID=cds-WJG93981.1;Parent=gene-PUW35_05140;Dbxref=NCBI_GP:WJG93981.1;Name=WJG93981.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=PUW35_05140;product=NAD(P)H:quinone oxidoreductase;protein_id=WJG93981.1;transl_table=11 CP118132.1 Genbank gene 1093216 1093383 . + . ID=gene-PUW35_05145;Name=PUW35_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05145 CP118132.1 Protein Homology CDS 1093216 1093383 . + 0 ID=cds-WJG93982.1;Parent=gene-PUW35_05145;Dbxref=NCBI_GP:WJG93982.1;Name=WJG93982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=PUW35_05145;product=general stress protein;protein_id=WJG93982.1;transl_table=11 CP118132.1 Genbank pseudogene 1093410 1093802 . + . ID=gene-PUW35_05150;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=pseudogene;locus_tag=PUW35_05150;pseudo=true CP118132.1 Protein Homology CDS 1093410 1093802 . + 0 ID=cds-PUW35_05150;Parent=gene-PUW35_05150;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=PUW35_05150;product=HTH-type transcriptional regulator RutR;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1093799 1094194 . - . ID=gene-PUW35_05155;Name=PUW35_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05155 CP118132.1 Protein Homology CDS 1093799 1094194 . - 0 ID=cds-WJG93983.1;Parent=gene-PUW35_05155;Dbxref=NCBI_GP:WJG93983.1;Name=WJG93983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=PUW35_05155;product=lysozyme inhibitor LprI family protein;protein_id=WJG93983.1;transl_table=11 CP118132.1 Genbank pseudogene 1094253 1098213 . - . ID=gene-PUW35_05160;Name=putA;gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=PUW35_05160;pseudo=true CP118132.1 Protein Homology CDS 1094253 1098213 . - 0 ID=cds-PUW35_05160;Parent=gene-PUW35_05160;Note=frameshifted;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=PUW35_05160;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1098635 1100143 . + . ID=gene-PUW35_05165;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=PUW35_05165 CP118132.1 Protein Homology CDS 1098635 1100143 . + 0 ID=cds-WJG93984.1;Parent=gene-PUW35_05165;Dbxref=NCBI_GP:WJG93984.1;Name=WJG93984.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=PUW35_05165;product=sodium/proline symporter PutP;protein_id=WJG93984.1;transl_table=11 CP118132.1 Genbank gene 1101036 1101824 . + . ID=gene-PUW35_05170;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=PUW35_05170 CP118132.1 Protein Homology CDS 1101036 1101824 . + 0 ID=cds-WJG93985.1;Parent=gene-PUW35_05170;Dbxref=NCBI_GP:WJG93985.1;Name=WJG93985.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=PUW35_05170;product=phosphate starvation-inducible protein PhoH;protein_id=WJG93985.1;transl_table=11 CP118132.1 Genbank gene 1101930 1102811 . - . ID=gene-PUW35_05175;Name=PUW35_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05175 CP118132.1 Protein Homology CDS 1101930 1102811 . - 0 ID=cds-WJG93986.1;Parent=gene-PUW35_05175;Dbxref=NCBI_GP:WJG93986.1;Name=WJG93986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=PUW35_05175;product=MurR/RpiR family transcriptional regulator;protein_id=WJG93986.1;transl_table=11 CP118132.1 Genbank gene 1103096 1104592 . - . ID=gene-PUW35_05180;Name=PUW35_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05180 CP118132.1 Protein Homology CDS 1103096 1104592 . - 0 ID=cds-WJG93987.1;Parent=gene-PUW35_05180;Dbxref=NCBI_GP:WJG93987.1;Name=WJG93987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=PUW35_05180;product=sodium:solute symporter;protein_id=WJG93987.1;transl_table=11 CP118132.1 Genbank gene 1104929 1105609 . - . ID=gene-PUW35_05185;Name=PUW35_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05185 CP118132.1 Protein Homology CDS 1104929 1105609 . - 0 ID=cds-WJG93988.1;Parent=gene-PUW35_05185;Dbxref=NCBI_GP:WJG93988.1;Name=WJG93988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=PUW35_05185;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WJG93988.1;transl_table=11 CP118132.1 Genbank pseudogene 1106115 1107267 . + . ID=gene-PUW35_05190;Name=PUW35_05190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05190;pseudo=true CP118132.1 Protein Homology CDS 1106115 1107267 . + 0 ID=cds-PUW35_05190;Parent=gene-PUW35_05190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=PUW35_05190;product=N-acetylneuraminate epimerase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1107313 1108005 . + . ID=gene-PUW35_05195;Name=PUW35_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05195 CP118132.1 Protein Homology CDS 1107313 1108005 . + 0 ID=cds-WJG93989.1;Parent=gene-PUW35_05195;Dbxref=NCBI_GP:WJG93989.1;Name=WJG93989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=PUW35_05195;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WJG93989.1;transl_table=11 CP118132.1 Genbank gene 1108288 1109568 . + . ID=gene-PUW35_05200;Name=PUW35_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05200 CP118132.1 Protein Homology CDS 1108288 1109568 . + 0 ID=cds-WJG93990.1;Parent=gene-PUW35_05200;Dbxref=NCBI_GP:WJG93990.1;Name=WJG93990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=PUW35_05200;product=MFS transporter;protein_id=WJG93990.1;transl_table=11 CP118132.1 Genbank pseudogene 1109579 1110685 . + . ID=gene-PUW35_05205;Name=PUW35_05205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05205;pseudo=true CP118132.1 Protein Homology CDS 1109579 1110685 . + 0 ID=cds-PUW35_05205;Parent=gene-PUW35_05205;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=PUW35_05205;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1110852 1111145 . - . ID=gene-PUW35_05210;Name=PUW35_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05210 CP118132.1 Protein Homology CDS 1110852 1111145 . - 0 ID=cds-WJG93991.1;Parent=gene-PUW35_05210;Dbxref=NCBI_GP:WJG93991.1;Name=WJG93991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=PUW35_05210;product=YciI family protein;protein_id=WJG93991.1;transl_table=11 CP118132.1 Genbank gene 1111176 1111394 . + . ID=gene-PUW35_05215;Name=PUW35_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05215 CP118132.1 Protein Homology CDS 1111176 1111394 . + 0 ID=cds-WJG93992.1;Parent=gene-PUW35_05215;Dbxref=NCBI_GP:WJG93992.1;Name=WJG93992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880618.1;locus_tag=PUW35_05215;product=hypothetical protein;protein_id=WJG93992.1;transl_table=11 CP118132.1 Genbank gene 1111995 1112453 . - . ID=gene-PUW35_05220;Name=PUW35_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05220 CP118132.1 Protein Homology CDS 1111995 1112453 . - 0 ID=cds-WJG93993.1;Parent=gene-PUW35_05220;Dbxref=NCBI_GP:WJG93993.1;Name=WJG93993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623372.1;locus_tag=PUW35_05220;product=DUF1311 domain-containing protein;protein_id=WJG93993.1;transl_table=11 CP118132.1 Genbank gene 1112577 1112948 . - . ID=gene-PUW35_05225;Name=PUW35_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05225 CP118132.1 Protein Homology CDS 1112577 1112948 . - 0 ID=cds-WJG93994.1;Parent=gene-PUW35_05225;Dbxref=NCBI_GP:WJG93994.1;Name=WJG93994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747240.1;locus_tag=PUW35_05225;product=hypothetical protein;protein_id=WJG93994.1;transl_table=11 CP118132.1 Genbank gene 1112957 1113280 . - . ID=gene-PUW35_05230;Name=PUW35_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05230 CP118132.1 GeneMarkS-2+ CDS 1112957 1113280 . - 0 ID=cds-WJG93995.1;Parent=gene-PUW35_05230;Dbxref=NCBI_GP:WJG93995.1;Name=WJG93995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_05230;product=DUF1311 domain-containing protein;protein_id=WJG93995.1;transl_table=11 CP118132.1 Genbank gene 1113416 1114288 . - . ID=gene-PUW35_05235;Name=PUW35_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05235 CP118132.1 Protein Homology CDS 1113416 1114288 . - 0 ID=cds-WJG93996.1;Parent=gene-PUW35_05235;Dbxref=NCBI_GP:WJG93996.1;Name=WJG93996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712141.1;locus_tag=PUW35_05235;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WJG93996.1;transl_table=11 CP118132.1 Genbank gene 1114321 1114800 . - . ID=gene-PUW35_05240;Name=PUW35_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05240 CP118132.1 Protein Homology CDS 1114321 1114800 . - 0 ID=cds-WJG93997.1;Parent=gene-PUW35_05240;Dbxref=NCBI_GP:WJG93997.1;Name=WJG93997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284963.1;locus_tag=PUW35_05240;product=Hcp family type VI secretion system effector;protein_id=WJG93997.1;transl_table=11 CP118132.1 Genbank gene 1114788 1116182 . - . ID=gene-PUW35_05245;Name=PUW35_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05245 CP118132.1 Protein Homology CDS 1114788 1116182 . - 0 ID=cds-WJG93998.1;Parent=gene-PUW35_05245;Dbxref=NCBI_GP:WJG93998.1;Name=WJG93998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076067.1;locus_tag=PUW35_05245;product=VasL domain-containing protein;protein_id=WJG93998.1;transl_table=11 CP118132.1 Genbank gene 1116193 1119654 . - . ID=gene-PUW35_05250;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=PUW35_05250 CP118132.1 Protein Homology CDS 1116193 1119654 . - 0 ID=cds-WJG93999.1;Parent=gene-PUW35_05250;Dbxref=NCBI_GP:WJG93999.1;Name=WJG93999.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914744.1;locus_tag=PUW35_05250;product=type VI secretion system membrane subunit TssM;protein_id=WJG93999.1;transl_table=11 CP118132.1 Genbank gene 1119733 1121118 . - . ID=gene-PUW35_05255;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=PUW35_05255 CP118132.1 Protein Homology CDS 1119733 1121118 . - 0 ID=cds-WJG95031.1;Parent=gene-PUW35_05255;Dbxref=NCBI_GP:WJG95031.1;Name=WJG95031.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752219.1;locus_tag=PUW35_05255;product=type VI secretion system protein TssA;protein_id=WJG95031.1;transl_table=11 CP118132.1 Genbank gene 1121147 1121884 . - . ID=gene-PUW35_05260;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=PUW35_05260 CP118132.1 Protein Homology CDS 1121147 1121884 . - 0 ID=cds-WJG94000.1;Parent=gene-PUW35_05260;Dbxref=NCBI_GP:WJG94000.1;Name=WJG94000.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089149.1;locus_tag=PUW35_05260;product=type VI secretion system-associated protein VasI;protein_id=WJG94000.1;transl_table=11 CP118132.1 Genbank gene 1121881 1124544 . - . ID=gene-PUW35_05265;Name=PUW35_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05265 CP118132.1 Protein Homology CDS 1121881 1124544 . - 0 ID=cds-WJG94001.1;Parent=gene-PUW35_05265;Dbxref=NCBI_GP:WJG94001.1;Name=WJG94001.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614299.1;locus_tag=PUW35_05265;product=AAA family ATPase;protein_id=WJG94001.1;transl_table=11 CP118132.1 Genbank gene 1124557 1125315 . - . ID=gene-PUW35_05270;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=PUW35_05270 CP118132.1 Protein Homology CDS 1124557 1125315 . - 0 ID=cds-WJG94002.1;Parent=gene-PUW35_05270;Dbxref=NCBI_GP:WJG94002.1;Name=WJG94002.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343977.1;locus_tag=PUW35_05270;product=type IVB secretion system protein IcmH/DotU;protein_id=WJG94002.1;transl_table=11 CP118132.1 Genbank gene 1125320 1126651 . - . ID=gene-PUW35_05275;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=PUW35_05275 CP118132.1 Protein Homology CDS 1125320 1126651 . - 0 ID=cds-WJG94003.1;Parent=gene-PUW35_05275;Dbxref=NCBI_GP:WJG94003.1;Name=WJG94003.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308252.1;locus_tag=PUW35_05275;product=type VI secretion system baseplate subunit TssK;protein_id=WJG94003.1;transl_table=11 CP118132.1 Genbank gene 1126654 1127187 . - . ID=gene-PUW35_05280;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=PUW35_05280 CP118132.1 Protein Homology CDS 1126654 1127187 . - 0 ID=cds-WJG94004.1;Parent=gene-PUW35_05280;Dbxref=NCBI_GP:WJG94004.1;Name=WJG94004.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001013424.1;locus_tag=PUW35_05280;product=type VI secretion system lipoprotein TssJ;protein_id=WJG94004.1;transl_table=11 CP118132.1 Genbank gene 1127184 1128470 . - . ID=gene-PUW35_05285;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=PUW35_05285 CP118132.1 Protein Homology CDS 1127184 1128470 . - 0 ID=cds-WJG94005.1;Parent=gene-PUW35_05285;Dbxref=NCBI_GP:WJG94005.1;Name=WJG94005.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=PUW35_05285;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WJG94005.1;transl_table=11 CP118132.1 Genbank gene 1128495 1129583 . - . ID=gene-PUW35_05290;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=PUW35_05290 CP118132.1 Protein Homology CDS 1128495 1129583 . - 0 ID=cds-WJG94006.1;Parent=gene-PUW35_05290;Dbxref=NCBI_GP:WJG94006.1;Name=WJG94006.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509052.1;locus_tag=PUW35_05290;product=type VI secretion system baseplate subunit TssG;protein_id=WJG94006.1;transl_table=11 CP118132.1 Genbank gene 1129547 1131400 . - . ID=gene-PUW35_05295;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=PUW35_05295 CP118132.1 Protein Homology CDS 1129547 1131400 . - 0 ID=cds-WJG94007.1;Parent=gene-PUW35_05295;Dbxref=NCBI_GP:WJG94007.1;Name=WJG94007.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=PUW35_05295;product=type VI secretion system baseplate subunit TssF;protein_id=WJG94007.1;transl_table=11 CP118132.1 Genbank gene 1131405 1131821 . - . ID=gene-PUW35_05300;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=PUW35_05300 CP118132.1 Protein Homology CDS 1131405 1131821 . - 0 ID=cds-WJG94008.1;Parent=gene-PUW35_05300;Dbxref=NCBI_GP:WJG94008.1;Name=WJG94008.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686004.1;locus_tag=PUW35_05300;product=type VI secretion system baseplate subunit TssE;protein_id=WJG94008.1;transl_table=11 CP118132.1 Genbank gene 1131818 1133290 . - . ID=gene-PUW35_05305;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=PUW35_05305 CP118132.1 Protein Homology CDS 1131818 1133290 . - 0 ID=cds-WJG94009.1;Parent=gene-PUW35_05305;Dbxref=NCBI_GP:WJG94009.1;Name=WJG94009.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056998.1;locus_tag=PUW35_05305;product=type VI secretion system contractile sheath large subunit;protein_id=WJG94009.1;transl_table=11 CP118132.1 Genbank gene 1133581 1134084 . - . ID=gene-PUW35_05310;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=PUW35_05310 CP118132.1 Protein Homology CDS 1133581 1134084 . - 0 ID=cds-WJG94010.1;Parent=gene-PUW35_05310;Dbxref=NCBI_GP:WJG94010.1;Name=WJG94010.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=PUW35_05310;product=type VI secretion system contractile sheath small subunit;protein_id=WJG94010.1;transl_table=11 CP118132.1 Genbank gene 1134713 1135231 . + . ID=gene-PUW35_05315;Name=PUW35_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05315 CP118132.1 Protein Homology CDS 1134713 1135231 . + 0 ID=cds-WJG94011.1;Parent=gene-PUW35_05315;Dbxref=NCBI_GP:WJG94011.1;Name=WJG94011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=PUW35_05315;product=Hcp family type VI secretion system effector;protein_id=WJG94011.1;transl_table=11 CP118132.1 Genbank gene 1135453 1137564 . + . ID=gene-PUW35_05320;Name=PUW35_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05320 CP118132.1 Protein Homology CDS 1135453 1137564 . + 0 ID=cds-WJG94012.1;Parent=gene-PUW35_05320;Dbxref=NCBI_GP:WJG94012.1;Name=WJG94012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103445.1;locus_tag=PUW35_05320;product=type VI secretion system tip protein VgrG;protein_id=WJG94012.1;transl_table=11 CP118132.1 Genbank pseudogene 1137666 1141477 . + . ID=gene-PUW35_05325;Name=PUW35_05325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05325;pseudo=true CP118132.1 Protein Homology CDS 1137666 1141477 . + 0 ID=cds-PUW35_05325;Parent=gene-PUW35_05325;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530200.1;locus_tag=PUW35_05325;product=DUF6531 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1141481 1142062 . + . ID=gene-PUW35_05330;Name=PUW35_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05330 CP118132.1 GeneMarkS-2+ CDS 1141481 1142062 . + 0 ID=cds-WJG95184.1;Parent=gene-PUW35_05330;Dbxref=NCBI_GP:WJG95184.1;Name=WJG95184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_05330;product=hypothetical protein;protein_id=WJG95184.1;transl_table=11 CP118132.1 Genbank gene 1142073 1142459 . + . ID=gene-PUW35_05335;Name=PUW35_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05335 CP118132.1 Protein Homology CDS 1142073 1142459 . + 0 ID=cds-WJG94013.1;Parent=gene-PUW35_05335;Dbxref=NCBI_GP:WJG94013.1;Name=WJG94013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622532.1;locus_tag=PUW35_05335;product=hypothetical protein;protein_id=WJG94013.1;transl_table=11 CP118132.1 Genbank gene 1142878 1147035 . + . ID=gene-PUW35_05340;Name=PUW35_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05340 CP118132.1 Protein Homology CDS 1142878 1147035 . + 0 ID=cds-WJG94014.1;Parent=gene-PUW35_05340;Dbxref=NCBI_GP:WJG94014.1;Name=WJG94014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509054.1;locus_tag=PUW35_05340;product=RHS element core protein;protein_id=WJG94014.1;transl_table=11 CP118132.1 Genbank gene 1147563 1148123 . + . ID=gene-PUW35_05345;Name=PUW35_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05345 CP118132.1 Protein Homology CDS 1147563 1148123 . + 0 ID=cds-WJG95032.1;Parent=gene-PUW35_05345;Dbxref=NCBI_GP:WJG95032.1;Name=WJG95032.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=PUW35_05345;product=hypothetical protein;protein_id=WJG95032.1;transl_table=11 CP118132.1 Genbank gene 1148191 1148643 . + . ID=gene-PUW35_05350;Name=PUW35_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05350 CP118132.1 Protein Homology CDS 1148191 1148643 . + 0 ID=cds-WJG94015.1;Parent=gene-PUW35_05350;Dbxref=NCBI_GP:WJG94015.1;Name=WJG94015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675351.1;locus_tag=PUW35_05350;product=tetratricopeptide repeat protein;protein_id=WJG94015.1;transl_table=11 CP118132.1 Genbank gene 1148706 1148966 . + . ID=gene-PUW35_05355;Name=PUW35_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05355 CP118132.1 Protein Homology CDS 1148706 1148966 . + 0 ID=cds-WJG94016.1;Parent=gene-PUW35_05355;Dbxref=NCBI_GP:WJG94016.1;Name=WJG94016.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=PUW35_05355;product=hypothetical protein;protein_id=WJG94016.1;transl_table=11 CP118132.1 Genbank gene 1149024 1149155 . + . ID=gene-PUW35_05360;Name=PUW35_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05360 CP118132.1 GeneMarkS-2+ CDS 1149024 1149155 . + 0 ID=cds-WJG94017.1;Parent=gene-PUW35_05360;Dbxref=NCBI_GP:WJG94017.1;Name=WJG94017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_05360;product=hypothetical protein;protein_id=WJG94017.1;transl_table=11 CP118132.1 Genbank pseudogene 1149349 1150498 . + . ID=gene-PUW35_05365;Name=PUW35_05365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05365;pseudo=true CP118132.1 Protein Homology CDS 1149349 1150498 . + 0 ID=cds-PUW35_05365;Parent=gene-PUW35_05365;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW35_05365;product=IS3-like element IS1230B family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1150637 1151416 . - . ID=gene-PUW35_05370;Name=PUW35_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05370 CP118132.1 Protein Homology CDS 1150637 1151416 . - 0 ID=cds-WJG94018.1;Parent=gene-PUW35_05370;Dbxref=NCBI_GP:WJG94018.1;Name=WJG94018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686692.1;locus_tag=PUW35_05370;product=hypothetical protein;protein_id=WJG94018.1;transl_table=11 CP118132.1 Genbank gene 1151684 1151962 . + . ID=gene-PUW35_05375;Name=PUW35_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05375 CP118132.1 Protein Homology CDS 1151684 1151962 . + 0 ID=cds-WJG94019.1;Parent=gene-PUW35_05375;Dbxref=NCBI_GP:WJG94019.1;Name=WJG94019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675348.1;locus_tag=PUW35_05375;product=hypothetical protein;protein_id=WJG94019.1;transl_table=11 CP118132.1 Genbank gene 1151959 1152336 . + . ID=gene-PUW35_05380;Name=PUW35_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05380 CP118132.1 Protein Homology CDS 1151959 1152336 . + 0 ID=cds-WJG94020.1;Parent=gene-PUW35_05380;Dbxref=NCBI_GP:WJG94020.1;Name=WJG94020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574179.1;locus_tag=PUW35_05380;product=hypothetical protein;protein_id=WJG94020.1;transl_table=11 CP118132.1 Genbank gene 1152876 1153088 . + . ID=gene-PUW35_05385;Name=PUW35_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05385 CP118132.1 Protein Homology CDS 1152876 1153088 . + 0 ID=cds-WJG94021.1;Parent=gene-PUW35_05385;Dbxref=NCBI_GP:WJG94021.1;Name=WJG94021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=PUW35_05385;product=cold-shock protein;protein_id=WJG94021.1;transl_table=11 CP118132.1 Genbank gene 1153099 1153287 . + . ID=gene-PUW35_05390;Name=PUW35_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05390 CP118132.1 Protein Homology CDS 1153099 1153287 . + 0 ID=cds-WJG95033.1;Parent=gene-PUW35_05390;Dbxref=NCBI_GP:WJG95033.1;Name=WJG95033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=PUW35_05390;product=cold-shock protein;protein_id=WJG95033.1;transl_table=11 CP118132.1 Genbank gene 1153546 1154742 . - . ID=gene-PUW35_05395;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=PUW35_05395 CP118132.1 Protein Homology CDS 1153546 1154742 . - 0 ID=cds-WJG94022.1;Parent=gene-PUW35_05395;Dbxref=NCBI_GP:WJG94022.1;Name=WJG94022.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=PUW35_05395;product=porin OmpS1;protein_id=WJG94022.1;transl_table=11 CP118132.1 Genbank gene 1155391 1155702 . + . ID=gene-PUW35_05400;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=PUW35_05400 CP118132.1 Protein Homology CDS 1155391 1155702 . + 0 ID=cds-WJG94023.1;Parent=gene-PUW35_05400;Dbxref=NCBI_GP:WJG94023.1;Name=WJG94023.1;gbkey=CDS;gene=drpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107428.1;locus_tag=PUW35_05400;product=cell division protein DrpB;protein_id=WJG94023.1;transl_table=11 CP118132.1 Genbank gene 1155782 1156477 . + . ID=gene-PUW35_05405;Name=PUW35_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05405 CP118132.1 Protein Homology CDS 1155782 1156477 . + 0 ID=cds-WJG94024.1;Parent=gene-PUW35_05405;Dbxref=NCBI_GP:WJG94024.1;Name=WJG94024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=PUW35_05405;product=phosphohydrolase;protein_id=WJG94024.1;transl_table=11 CP118132.1 Genbank gene 1156551 1157981 . + . ID=gene-PUW35_05410;Name=PUW35_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05410 CP118132.1 Protein Homology CDS 1156551 1157981 . + 0 ID=cds-WJG94025.1;Parent=gene-PUW35_05410;Dbxref=NCBI_GP:WJG94025.1;Name=WJG94025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=PUW35_05410;product=DNA cytosine methyltransferase;protein_id=WJG94025.1;transl_table=11 CP118132.1 Genbank gene 1157962 1158432 . + . ID=gene-PUW35_05415;Name=PUW35_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05415 CP118132.1 Protein Homology CDS 1157962 1158432 . + 0 ID=cds-WJG94026.1;Parent=gene-PUW35_05415;Dbxref=NCBI_GP:WJG94026.1;Name=WJG94026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=PUW35_05415;product=very short patch repair endonuclease;protein_id=WJG94026.1;transl_table=11 CP118132.1 Genbank pseudogene 1158421 1159336 . - . ID=gene-PUW35_05420;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=pseudogene;locus_tag=PUW35_05420;pseudo=true CP118132.1 Protein Homology CDS 1158421 1159336 . - 0 ID=cds-PUW35_05420;Parent=gene-PUW35_05420;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=PUW35_05420;product=drug/metabolite exporter YedA;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1159506 1160422 . + . ID=gene-PUW35_05425;Name=PUW35_05425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05425;pseudo=true CP118132.1 Protein Homology CDS 1159506 1160422 . + 0 ID=cds-PUW35_05425;Parent=gene-PUW35_05425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=PUW35_05425;product=DUF808 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1160499 1160684 . + . ID=gene-PUW35_05430;Name=PUW35_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05430 CP118132.1 Protein Homology CDS 1160499 1160684 . + 0 ID=cds-WJG94027.1;Parent=gene-PUW35_05430;Dbxref=NCBI_GP:WJG94027.1;Name=WJG94027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=PUW35_05430;product=YodC family protein;protein_id=WJG94027.1;transl_table=11 CP118132.1 Genbank gene 1160849 1162561 . + . ID=gene-PUW35_05435;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=PUW35_05435 CP118132.1 Protein Homology CDS 1160849 1162561 . + 0 ID=cds-WJG94028.1;Parent=gene-PUW35_05435;Dbxref=NCBI_GP:WJG94028.1;Name=WJG94028.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=PUW35_05435;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WJG94028.1;transl_table=11 CP118132.1 Genbank gene 1162540 1163355 . - . ID=gene-PUW35_05440;Name=PUW35_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05440 CP118132.1 Protein Homology CDS 1162540 1163355 . - 0 ID=cds-WJG94029.1;Parent=gene-PUW35_05440;Dbxref=NCBI_GP:WJG94029.1;Name=WJG94029.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=PUW35_05440;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WJG94029.1;transl_table=11 CP118132.1 Genbank gene 1163665 1163892 . - . ID=gene-PUW35_05445;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=PUW35_05445 CP118132.1 Protein Homology CDS 1163665 1163892 . - 0 ID=cds-WJG94030.1;Parent=gene-PUW35_05445;Dbxref=NCBI_GP:WJG94030.1;Name=WJG94030.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=PUW35_05445;product=YodD family peroxide/acid resistance protein;protein_id=WJG94030.1;transl_table=11 CP118132.1 Genbank gene 1164021 1164215 . + . ID=gene-PUW35_05450;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=PUW35_05450 CP118132.1 Protein Homology CDS 1164021 1164215 . + 0 ID=cds-WJG94031.1;Parent=gene-PUW35_05450;Dbxref=NCBI_GP:WJG94031.1;Name=WJG94031.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=PUW35_05450;product=protein DsrB;protein_id=WJG94031.1;transl_table=11 CP118132.1 Genbank gene 1164254 1164877 . - . ID=gene-PUW35_05455;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=PUW35_05455 CP118132.1 Protein Homology CDS 1164254 1164877 . - 0 ID=cds-WJG94032.1;Parent=gene-PUW35_05455;Dbxref=NCBI_GP:WJG94032.1;Name=WJG94032.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=PUW35_05455;product=transcriptional regulator RcsA;protein_id=WJG94032.1;transl_table=11 CP118132.1 Genbank gene 1165159 1165953 . - . ID=gene-PUW35_05460;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=PUW35_05460 CP118132.1 Protein Homology CDS 1165159 1165953 . - 0 ID=cds-WJG94033.1;Parent=gene-PUW35_05460;Dbxref=NCBI_GP:WJG94033.1;Name=WJG94033.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=PUW35_05460;product=flagellar biosynthetic protein FliR;protein_id=WJG94033.1;transl_table=11 CP118132.1 Genbank gene 1165962 1166231 . - . ID=gene-PUW35_05465;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=PUW35_05465 CP118132.1 Protein Homology CDS 1165962 1166231 . - 0 ID=cds-WJG94034.1;Parent=gene-PUW35_05465;Dbxref=NCBI_GP:WJG94034.1;Name=WJG94034.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=PUW35_05465;product=flagellar biosynthesis protein FliQ;protein_id=WJG94034.1;transl_table=11 CP118132.1 Genbank gene 1166241 1166978 . - . ID=gene-PUW35_05470;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=PUW35_05470 CP118132.1 Protein Homology CDS 1166241 1166978 . - 0 ID=cds-WJG94035.1;Parent=gene-PUW35_05470;Dbxref=NCBI_GP:WJG94035.1;Name=WJG94035.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=PUW35_05470;product=flagellar type III secretion system pore protein FliP;protein_id=WJG94035.1;transl_table=11 CP118132.1 Genbank gene 1166978 1167355 . - . ID=gene-PUW35_05475;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=PUW35_05475 CP118132.1 Protein Homology CDS 1166978 1167355 . - 0 ID=cds-WJG94036.1;Parent=gene-PUW35_05475;Dbxref=NCBI_GP:WJG94036.1;Name=WJG94036.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=PUW35_05475;product=flagellar biosynthetic protein FliO;protein_id=WJG94036.1;transl_table=11 CP118132.1 Genbank gene 1167355 1167768 . - . ID=gene-PUW35_05480;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=PUW35_05480 CP118132.1 Protein Homology CDS 1167355 1167768 . - 0 ID=cds-WJG94037.1;Parent=gene-PUW35_05480;Dbxref=NCBI_GP:WJG94037.1;Name=WJG94037.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=PUW35_05480;product=flagellar motor switch protein FliN;protein_id=WJG94037.1;transl_table=11 CP118132.1 Genbank gene 1167765 1168769 . - . ID=gene-PUW35_05485;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=PUW35_05485 CP118132.1 Protein Homology CDS 1167765 1168769 . - 0 ID=cds-WJG94038.1;Parent=gene-PUW35_05485;Dbxref=NCBI_GP:WJG94038.1;Name=WJG94038.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=PUW35_05485;product=flagellar motor switch protein FliM;protein_id=WJG94038.1;transl_table=11 CP118132.1 Genbank gene 1168774 1169241 . - . ID=gene-PUW35_05490;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=PUW35_05490 CP118132.1 Protein Homology CDS 1168774 1169241 . - 0 ID=cds-WJG94039.1;Parent=gene-PUW35_05490;Dbxref=NCBI_GP:WJG94039.1;Name=WJG94039.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=PUW35_05490;product=flagellar basal body-associated protein FliL;protein_id=WJG94039.1;transl_table=11 CP118132.1 Genbank gene 1169346 1170563 . - . ID=gene-PUW35_05495;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=PUW35_05495 CP118132.1 Protein Homology CDS 1169346 1170563 . - 0 ID=cds-WJG94040.1;Parent=gene-PUW35_05495;Dbxref=NCBI_GP:WJG94040.1;Name=WJG94040.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=PUW35_05495;product=flagellar hook length control protein FliK;protein_id=WJG94040.1;transl_table=11 CP118132.1 Genbank gene 1170560 1171003 . - . ID=gene-PUW35_05500;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=PUW35_05500 CP118132.1 Protein Homology CDS 1170560 1171003 . - 0 ID=cds-WJG94041.1;Parent=gene-PUW35_05500;Dbxref=NCBI_GP:WJG94041.1;Name=WJG94041.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=PUW35_05500;product=flagellar export protein FliJ;protein_id=WJG94041.1;transl_table=11 CP118132.1 Genbank gene 1171025 1172395 . - . ID=gene-PUW35_05505;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=PUW35_05505 CP118132.1 Protein Homology CDS 1171025 1172395 . - 0 ID=cds-WJG94042.1;Parent=gene-PUW35_05505;Dbxref=NCBI_GP:WJG94042.1;Name=WJG94042.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=PUW35_05505;product=flagellar protein export ATPase FliI;protein_id=WJG94042.1;transl_table=11 CP118132.1 Genbank gene 1172395 1173102 . - . ID=gene-PUW35_05510;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=PUW35_05510 CP118132.1 Protein Homology CDS 1172395 1173102 . - 0 ID=cds-WJG94043.1;Parent=gene-PUW35_05510;Dbxref=NCBI_GP:WJG94043.1;Name=WJG94043.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=PUW35_05510;product=flagellar assembly protein FliH;protein_id=WJG94043.1;transl_table=11 CP118132.1 Genbank gene 1173095 1174090 . - . ID=gene-PUW35_05515;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=PUW35_05515 CP118132.1 Protein Homology CDS 1173095 1174090 . - 0 ID=cds-WJG94044.1;Parent=gene-PUW35_05515;Dbxref=NCBI_GP:WJG94044.1;Name=WJG94044.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=PUW35_05515;product=flagellar motor switch protein FliG;protein_id=WJG94044.1;transl_table=11 CP118132.1 Genbank gene 1174083 1175759 . - . ID=gene-PUW35_05520;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=PUW35_05520 CP118132.1 Protein Homology CDS 1174083 1175759 . - 0 ID=cds-WJG94045.1;Parent=gene-PUW35_05520;Dbxref=NCBI_GP:WJG94045.1;Name=WJG94045.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=PUW35_05520;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WJG94045.1;transl_table=11 CP118132.1 Genbank gene 1175976 1176290 . + . ID=gene-PUW35_05525;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=PUW35_05525 CP118132.1 Protein Homology CDS 1175976 1176290 . + 0 ID=cds-WJG94046.1;Parent=gene-PUW35_05525;Dbxref=NCBI_GP:WJG94046.1;Name=WJG94046.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=PUW35_05525;product=flagellar hook-basal body complex protein FliE;protein_id=WJG94046.1;transl_table=11 CP118132.1 Genbank gene 1176410 1176796 . - . ID=gene-PUW35_05530;Name=PUW35_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05530 CP118132.1 Protein Homology CDS 1176410 1176796 . - 0 ID=cds-WJG95034.1;Parent=gene-PUW35_05530;Dbxref=NCBI_GP:WJG95034.1;Name=WJG95034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=PUW35_05530;product=hypothetical protein;protein_id=WJG95034.1;transl_table=11 CP118132.1 Genbank gene 1177061 1177294 . - . ID=gene-PUW35_05535;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=PUW35_05535 CP118132.1 Protein Homology CDS 1177061 1177294 . - 0 ID=cds-WJG94047.1;Parent=gene-PUW35_05535;Dbxref=NCBI_GP:WJG94047.1;Name=WJG94047.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=PUW35_05535;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WJG94047.1;transl_table=11 CP118132.1 Genbank pseudogene 1177291 1178495 . - . ID=gene-PUW35_05540;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=pseudogene;locus_tag=PUW35_05540;pseudo=true CP118132.1 Protein Homology CDS 1177291 1178495 . - 0 ID=cds-PUW35_05540;Parent=gene-PUW35_05540;Note=frameshifted;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=PUW35_05540;product=selenium metabolism membrane protein YedE/FdhT;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1178681 1179082 . + . ID=gene-PUW35_05545;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=PUW35_05545 CP118132.1 Protein Homology CDS 1178681 1179082 . + 0 ID=cds-WJG95035.1;Parent=gene-PUW35_05545;Dbxref=NCBI_GP:WJG95035.1;Name=WJG95035.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754693.1;locus_tag=PUW35_05545;product=lipoprotein YedD;protein_id=WJG95035.1;transl_table=11 CP118132.1 Genbank pseudogene 1179122 1180604 . - . ID=gene-PUW35_05550;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=pseudogene;locus_tag=PUW35_05550;pseudo=true CP118132.1 Protein Homology CDS 1179122 1180604 . - 0 ID=cds-PUW35_05550;Parent=gene-PUW35_05550;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=PUW35_05550;product=alpha-amylase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1180676 1181044 . - . ID=gene-PUW35_05555;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=PUW35_05555 CP118132.1 Protein Homology CDS 1180676 1181044 . - 0 ID=cds-WJG94048.1;Parent=gene-PUW35_05555;Dbxref=NCBI_GP:WJG94048.1;Name=WJG94048.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=PUW35_05555;product=flagella biosynthesis regulatory protein FliT;protein_id=WJG94048.1;transl_table=11 CP118132.1 Genbank gene 1181044 1181451 . - . ID=gene-PUW35_05560;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=PUW35_05560 CP118132.1 Protein Homology CDS 1181044 1181451 . - 0 ID=cds-WJG94049.1;Parent=gene-PUW35_05560;Dbxref=NCBI_GP:WJG94049.1;Name=WJG94049.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=PUW35_05560;product=flagellar export chaperone FliS;protein_id=WJG94049.1;transl_table=11 CP118132.1 Genbank gene 1181466 1182872 . - . ID=gene-PUW35_05565;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=PUW35_05565 CP118132.1 Protein Homology CDS 1181466 1182872 . - 0 ID=cds-WJG94050.1;Parent=gene-PUW35_05565;Dbxref=NCBI_GP:WJG94050.1;Name=WJG94050.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=PUW35_05565;product=flagellar filament capping protein FliD;protein_id=WJG94050.1;transl_table=11 CP118132.1 Genbank gene 1182871 1183110 . + . ID=gene-PUW35_05570;Name=PUW35_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05570 CP118132.1 GeneMarkS-2+ CDS 1182871 1183110 . + 0 ID=cds-WJG94051.1;Parent=gene-PUW35_05570;Dbxref=NCBI_GP:WJG94051.1;Name=WJG94051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_05570;product=hypothetical protein;protein_id=WJG94051.1;transl_table=11 CP118132.1 Genbank gene 1183128 1184645 . + . ID=gene-PUW35_05575;Name=PUW35_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05575 CP118132.1 Protein Homology CDS 1183128 1184645 . + 0 ID=cds-WJG94052.1;Parent=gene-PUW35_05575;Dbxref=NCBI_GP:WJG94052.1;Name=WJG94052.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=PUW35_05575;product=flagellin;protein_id=WJG94052.1;transl_table=11 CP118132.1 Genbank gene 1184724 1185929 . + . ID=gene-PUW35_05580;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=PUW35_05580 CP118132.1 Protein Homology CDS 1184724 1185929 . + 0 ID=cds-WJG94053.1;Parent=gene-PUW35_05580;Dbxref=NCBI_GP:WJG94053.1;Name=WJG94053.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=PUW35_05580;product=flagellin lysine-N-methylase;protein_id=WJG94053.1;transl_table=11 CP118132.1 Genbank gene 1186126 1186845 . + . ID=gene-PUW35_05585;Name=PUW35_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05585 CP118132.1 Protein Homology CDS 1186126 1186845 . + 0 ID=cds-WJG94054.1;Parent=gene-PUW35_05585;Dbxref=NCBI_GP:WJG94054.1;Name=WJG94054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=PUW35_05585;product=RNA polymerase sigma factor FliA;protein_id=WJG94054.1;transl_table=11 CP118132.1 Genbank pseudogene 1186904 1187456 . + . ID=gene-PUW35_05590;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=pseudogene;locus_tag=PUW35_05590;pseudo=true CP118132.1 Protein Homology CDS 1186904 1187456 . + 0 ID=cds-PUW35_05590;Parent=gene-PUW35_05590;Note=frameshifted;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=PUW35_05590;product=flagella biosynthesis regulatory protein FliZ;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1187603 1188403 . + . ID=gene-PUW35_05595;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=PUW35_05595 CP118132.1 Protein Homology CDS 1187603 1188403 . + 0 ID=cds-WJG94055.1;Parent=gene-PUW35_05595;Dbxref=NCBI_GP:WJG94055.1;Name=WJG94055.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=PUW35_05595;product=cystine ABC transporter substrate-binding protein;protein_id=WJG94055.1;transl_table=11 CP118132.1 Genbank gene 1188557 1189543 . + . ID=gene-PUW35_05600;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=PUW35_05600 CP118132.1 Protein Homology CDS 1188557 1189543 . + 0 ID=cds-WJG94056.1;Parent=gene-PUW35_05600;Dbxref=NCBI_GP:WJG94056.1;Name=WJG94056.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=PUW35_05600;product=D-cysteine desulfhydrase;protein_id=WJG94056.1;transl_table=11 CP118132.1 Genbank gene 1189564 1190232 . + . ID=gene-PUW35_05605;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=PUW35_05605 CP118132.1 Protein Homology CDS 1189564 1190232 . + 0 ID=cds-WJG94057.1;Parent=gene-PUW35_05605;Dbxref=NCBI_GP:WJG94057.1;Name=WJG94057.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=PUW35_05605;product=cystine ABC transporter permease;protein_id=WJG94057.1;transl_table=11 CP118132.1 Genbank gene 1190229 1190981 . + . ID=gene-PUW35_05610;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=PUW35_05610 CP118132.1 Protein Homology CDS 1190229 1190981 . + 0 ID=cds-WJG94058.1;Parent=gene-PUW35_05610;Dbxref=NCBI_GP:WJG94058.1;Name=WJG94058.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=PUW35_05610;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WJG94058.1;transl_table=11 CP118132.1 Genbank gene 1191214 1191936 . + . ID=gene-PUW35_05615;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=PUW35_05615 CP118132.1 Protein Homology CDS 1191214 1191936 . + 0 ID=cds-WJG94059.1;Parent=gene-PUW35_05615;Dbxref=NCBI_GP:WJG94059.1;Name=WJG94059.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=PUW35_05615;product=transcriptional regulator SdiA;protein_id=WJG94059.1;transl_table=11 CP118132.1 Genbank gene 1192003 1192227 . - . ID=gene-PUW35_05620;Name=PUW35_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05620 CP118132.1 Protein Homology CDS 1192003 1192227 . - 0 ID=cds-WJG94060.1;Parent=gene-PUW35_05620;Dbxref=NCBI_GP:WJG94060.1;Name=WJG94060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=PUW35_05620;product=DUF2594 family protein;protein_id=WJG94060.1;transl_table=11 CP118132.1 Genbank pseudogene 1192224 1192377 . - . ID=gene-PUW35_05625;Name=PUW35_05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05625;pseudo=true CP118132.1 Protein Homology CDS 1192224 1192377 . - 0 ID=cds-PUW35_05625;Parent=gene-PUW35_05625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=PUW35_05625;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1192689 1193345 . + . ID=gene-PUW35_05630;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=PUW35_05630 CP118132.1 Protein Homology CDS 1192689 1193345 . + 0 ID=cds-WJG94061.1;Parent=gene-PUW35_05630;Dbxref=NCBI_GP:WJG94061.1;Name=WJG94061.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=PUW35_05630;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WJG94061.1;transl_table=11 CP118132.1 Genbank gene 1193342 1195174 . + . ID=gene-PUW35_05635;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=PUW35_05635 CP118132.1 Protein Homology CDS 1193342 1195174 . + 0 ID=cds-WJG94062.1;Parent=gene-PUW35_05635;Dbxref=NCBI_GP:WJG94062.1;Name=WJG94062.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=PUW35_05635;product=excinuclease ABC subunit UvrC;protein_id=WJG94062.1;transl_table=11 CP118132.1 Genbank gene 1195231 1195779 . + . ID=gene-PUW35_05640;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=PUW35_05640 CP118132.1 Protein Homology CDS 1195231 1195779 . + 0 ID=cds-WJG94063.1;Parent=gene-PUW35_05640;Dbxref=NCBI_GP:WJG94063.1;Name=WJG94063.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=PUW35_05640;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WJG94063.1;transl_table=11 CP118132.1 Genbank gene 1195931 1196006 . + . ID=gene-PUW35_05645;Name=PUW35_05645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_05645 CP118132.1 tRNAscan-SE tRNA 1195931 1196006 . + . ID=rna-PUW35_05645;Parent=gene-PUW35_05645;anticodon=(pos:1195964..1195966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_05645;product=tRNA-Gly CP118132.1 tRNAscan-SE exon 1195931 1196006 . + . ID=exon-PUW35_05645-1;Parent=rna-PUW35_05645;anticodon=(pos:1195964..1195966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_05645;product=tRNA-Gly CP118132.1 Genbank gene 1196058 1196131 . + . ID=gene-PUW35_05650;Name=PUW35_05650;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_05650 CP118132.1 tRNAscan-SE tRNA 1196058 1196131 . + . ID=rna-PUW35_05650;Parent=gene-PUW35_05650;anticodon=(pos:1196090..1196092);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_05650;product=tRNA-Cys CP118132.1 tRNAscan-SE exon 1196058 1196131 . + . ID=exon-PUW35_05650-1;Parent=rna-PUW35_05650;anticodon=(pos:1196090..1196092);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_05650;product=tRNA-Cys CP118132.1 Genbank gene 1196143 1196229 . + . ID=gene-PUW35_05655;Name=PUW35_05655;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_05655 CP118132.1 tRNAscan-SE tRNA 1196143 1196229 . + . ID=rna-PUW35_05655;Parent=gene-PUW35_05655;anticodon=(pos:1196177..1196179);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_05655;product=tRNA-Leu CP118132.1 tRNAscan-SE exon 1196143 1196229 . + . ID=exon-PUW35_05655-1;Parent=rna-PUW35_05655;anticodon=(pos:1196177..1196179);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_05655;product=tRNA-Leu CP118132.1 Genbank pseudogene 1196478 1196809 . + . ID=gene-PUW35_05660;Name=PUW35_05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05660;pseudo=true CP118132.1 Protein Homology CDS 1196478 1196809 . + 0 ID=cds-PUW35_05660;Parent=gene-PUW35_05660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=PUW35_05660;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1197023 1198462 . + . ID=gene-PUW35_05665;Name=PUW35_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05665 CP118132.1 Protein Homology CDS 1197023 1198462 . + 0 ID=cds-WJG94064.1;Parent=gene-PUW35_05665;Dbxref=NCBI_GP:WJG94064.1;Name=WJG94064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=PUW35_05665;product=SH3 domain-containing protein;protein_id=WJG94064.1;transl_table=11 CP118132.1 Genbank pseudogene 1198675 1199000 . + . ID=gene-PUW35_05670;Name=PUW35_05670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05670;pseudo=true CP118132.1 Protein Homology CDS 1198675 1199000 . + 0 ID=cds-PUW35_05670;Parent=gene-PUW35_05670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=PUW35_05670;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1199239 1199904 . + . ID=gene-PUW35_05675;Name=PUW35_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05675 CP118132.1 Protein Homology CDS 1199239 1199904 . + 0 ID=cds-WJG94065.1;Parent=gene-PUW35_05675;Dbxref=NCBI_GP:WJG94065.1;Name=WJG94065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=PUW35_05675;product=YecA family protein;protein_id=WJG94065.1;transl_table=11 CP118132.1 Genbank gene 1199979 1201199 . - . ID=gene-PUW35_05680;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=PUW35_05680 CP118132.1 Protein Homology CDS 1199979 1201199 . - 0 ID=cds-WJG94066.1;Parent=gene-PUW35_05680;Dbxref=NCBI_GP:WJG94066.1;Name=WJG94066.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=PUW35_05680;product=tyrosine transporter TyrP;protein_id=WJG94066.1;transl_table=11 CP118132.1 Genbank gene 1201426 1201665 . + . ID=gene-PUW35_05685;Name=PUW35_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05685 CP118132.1 Protein Homology CDS 1201426 1201665 . + 0 ID=cds-WJG94067.1;Parent=gene-PUW35_05685;Dbxref=NCBI_GP:WJG94067.1;Name=WJG94067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=PUW35_05685;product=YecH family protein;protein_id=WJG94067.1;transl_table=11 CP118132.1 Genbank gene 1201711 1202208 . - . ID=gene-PUW35_05690;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=PUW35_05690 CP118132.1 Protein Homology CDS 1201711 1202208 . - 0 ID=cds-WJG94068.1;Parent=gene-PUW35_05690;Dbxref=NCBI_GP:WJG94068.1;Name=WJG94068.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=PUW35_05690;product=non-heme ferritin;protein_id=WJG94068.1;transl_table=11 CP118132.1 Genbank gene 1202448 1202783 . - . ID=gene-PUW35_05695;Name=PUW35_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05695 CP118132.1 Protein Homology CDS 1202448 1202783 . - 0 ID=cds-WJG94069.1;Parent=gene-PUW35_05695;Dbxref=NCBI_GP:WJG94069.1;Name=WJG94069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=PUW35_05695;product=YecR-like lipofamily protein;protein_id=WJG94069.1;transl_table=11 CP118132.1 Genbank gene 1203039 1203677 . + . ID=gene-PUW35_05700;Name=PUW35_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05700 CP118132.1 Protein Homology CDS 1203039 1203677 . + 0 ID=cds-WJG94070.1;Parent=gene-PUW35_05700;Dbxref=NCBI_GP:WJG94070.1;Name=WJG94070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=PUW35_05700;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WJG94070.1;transl_table=11 CP118132.1 Genbank gene 1203856 1204359 . - . ID=gene-PUW35_05705;Name=PUW35_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05705 CP118132.1 Protein Homology CDS 1203856 1204359 . - 0 ID=cds-WJG94071.1;Parent=gene-PUW35_05705;Dbxref=NCBI_GP:WJG94071.1;Name=WJG94071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=PUW35_05705;product=non-heme ferritin-like protein;protein_id=WJG94071.1;transl_table=11 CP118132.1 Genbank gene 1204909 1205466 . + . ID=gene-PUW35_05710;Name=PUW35_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05710 CP118132.1 Protein Homology CDS 1204909 1205466 . + 0 ID=cds-WJG94072.1;Parent=gene-PUW35_05710;Dbxref=NCBI_GP:WJG94072.1;Name=WJG94072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=PUW35_05710;product=DJ-1/PfpI family protein;protein_id=WJG94072.1;transl_table=11 CP118132.1 Genbank pseudogene 1205695 1205877 . + . ID=gene-PUW35_05715;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=PUW35_05715;pseudo=true CP118132.1 Protein Homology CDS 1205695 1205877 . + 0 ID=cds-PUW35_05715;Parent=gene-PUW35_05715;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=PUW35_05715;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1206100 1206903 . + . ID=gene-PUW35_05720;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=PUW35_05720 CP118132.1 Protein Homology CDS 1206100 1206903 . + 0 ID=cds-WJG94073.1;Parent=gene-PUW35_05720;Dbxref=NCBI_GP:WJG94073.1;Name=WJG94073.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=PUW35_05720;product=trehalose-phosphatase;protein_id=WJG94073.1;transl_table=11 CP118132.1 Genbank gene 1206878 1208299 . + . ID=gene-PUW35_05725;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=PUW35_05725 CP118132.1 Protein Homology CDS 1206878 1208299 . + 0 ID=cds-WJG94074.1;Parent=gene-PUW35_05725;Dbxref=NCBI_GP:WJG94074.1;Name=WJG94074.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=PUW35_05725;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WJG94074.1;transl_table=11 CP118132.1 Genbank gene 1208317 1208745 . - . ID=gene-PUW35_05730;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=PUW35_05730 CP118132.1 Protein Homology CDS 1208317 1208745 . - 0 ID=cds-WJG94075.1;Parent=gene-PUW35_05730;Dbxref=NCBI_GP:WJG94075.1;Name=WJG94075.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=PUW35_05730;product=universal stress protein UspC;protein_id=WJG94075.1;transl_table=11 CP118132.1 Genbank gene 1208742 1208858 . - . ID=gene-PUW35_05735;Name=PUW35_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05735 CP118132.1 Protein Homology CDS 1208742 1208858 . - 0 ID=cds-WJG94076.1;Parent=gene-PUW35_05735;Dbxref=NCBI_GP:WJG94076.1;Name=WJG94076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=PUW35_05735;product=hypothetical protein;protein_id=WJG94076.1;transl_table=11 CP118132.1 Genbank gene 1209541 1209882 . + . ID=gene-PUW35_05740;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=PUW35_05740 CP118132.1 Protein Homology CDS 1209541 1209882 . + 0 ID=cds-WJG94077.1;Parent=gene-PUW35_05740;Dbxref=NCBI_GP:WJG94077.1;Name=WJG94077.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=PUW35_05740;product=flagellar transcriptional regulator FlhD;protein_id=WJG94077.1;transl_table=11 CP118132.1 Genbank gene 1209879 1210463 . + . ID=gene-PUW35_05745;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=PUW35_05745 CP118132.1 Protein Homology CDS 1209879 1210463 . + 0 ID=cds-WJG94078.1;Parent=gene-PUW35_05745;Dbxref=NCBI_GP:WJG94078.1;Name=WJG94078.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=PUW35_05745;product=flagellar transcriptional regulator FlhC;protein_id=WJG94078.1;transl_table=11 CP118132.1 Genbank gene 1210588 1211475 . + . ID=gene-PUW35_05750;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=PUW35_05750 CP118132.1 Protein Homology CDS 1210588 1211475 . + 0 ID=cds-WJG94079.1;Parent=gene-PUW35_05750;Dbxref=NCBI_GP:WJG94079.1;Name=WJG94079.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=PUW35_05750;product=flagellar motor stator protein MotA;protein_id=WJG94079.1;transl_table=11 CP118132.1 Genbank gene 1211472 1212401 . + . ID=gene-PUW35_05755;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=PUW35_05755 CP118132.1 Protein Homology CDS 1211472 1212401 . + 0 ID=cds-WJG94080.1;Parent=gene-PUW35_05755;Dbxref=NCBI_GP:WJG94080.1;Name=WJG94080.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=PUW35_05755;product=flagellar motor protein MotB;protein_id=WJG94080.1;transl_table=11 CP118132.1 Genbank gene 1212406 1214421 . + . ID=gene-PUW35_05760;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=PUW35_05760 CP118132.1 Protein Homology CDS 1212406 1214421 . + 0 ID=cds-WJG94081.1;Parent=gene-PUW35_05760;Dbxref=NCBI_GP:WJG94081.1;Name=WJG94081.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=PUW35_05760;product=chemotaxis protein CheA;protein_id=WJG94081.1;transl_table=11 CP118132.1 Genbank gene 1214442 1214945 . + . ID=gene-PUW35_05765;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=PUW35_05765 CP118132.1 Protein Homology CDS 1214442 1214945 . + 0 ID=cds-WJG94082.1;Parent=gene-PUW35_05765;Dbxref=NCBI_GP:WJG94082.1;Name=WJG94082.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=PUW35_05765;product=chemotaxis protein CheW;protein_id=WJG94082.1;transl_table=11 CP118132.1 Genbank pseudogene 1215180 1216839 . + . ID=gene-PUW35_05770;Name=tar;gbkey=Gene;gene=tar;gene_biotype=pseudogene;locus_tag=PUW35_05770;pseudo=true CP118132.1 Protein Homology CDS 1215180 1216839 . + 0 ID=cds-PUW35_05770;Parent=gene-PUW35_05770;Note=frameshifted;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=PUW35_05770;product=methyl-accepting chemotaxis protein II;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1216993 1217859 . + . ID=gene-PUW35_05775;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=PUW35_05775 CP118132.1 Protein Homology CDS 1216993 1217859 . + 0 ID=cds-WJG94083.1;Parent=gene-PUW35_05775;Dbxref=NCBI_GP:WJG94083.1;Name=WJG94083.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=PUW35_05775;product=protein-glutamate O-methyltransferase CheR;protein_id=WJG94083.1;transl_table=11 CP118132.1 Genbank gene 1217856 1218905 . + . ID=gene-PUW35_05780;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=PUW35_05780 CP118132.1 Protein Homology CDS 1217856 1218905 . + 0 ID=cds-WJG94084.1;Parent=gene-PUW35_05780;Dbxref=NCBI_GP:WJG94084.1;Name=WJG94084.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=PUW35_05780;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WJG94084.1;transl_table=11 CP118132.1 Genbank gene 1218923 1219312 . + . ID=gene-PUW35_05785;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=PUW35_05785 CP118132.1 Protein Homology CDS 1218923 1219312 . + 0 ID=cds-WJG94085.1;Parent=gene-PUW35_05785;Dbxref=NCBI_GP:WJG94085.1;Name=WJG94085.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=PUW35_05785;product=chemotaxis response regulator CheY;protein_id=WJG94085.1;transl_table=11 CP118132.1 Genbank pseudogene 1219323 1219966 . + . ID=gene-PUW35_05790;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=pseudogene;locus_tag=PUW35_05790;pseudo=true CP118132.1 Protein Homology CDS 1219323 1219966 . + 0 ID=cds-PUW35_05790;Parent=gene-PUW35_05790;Note=frameshifted;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=PUW35_05790;product=protein phosphatase CheZ;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1220160 1221114 . + . ID=gene-PUW35_05795;Name=PUW35_05795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05795;pseudo=true CP118132.1 Protein Homology CDS 1220160 1221114 . + 0 ID=cds-PUW35_05795;Parent=gene-PUW35_05795;Note=frameshifted;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=PUW35_05795;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1221107 1223185 . + . ID=gene-PUW35_05800;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=pseudogene;locus_tag=PUW35_05800;pseudo=true CP118132.1 Protein Homology CDS 1221107 1223185 . + 0 ID=cds-PUW35_05800;Parent=gene-PUW35_05800;Note=internal stop;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=PUW35_05800;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1223185 1223577 . + . ID=gene-PUW35_05805;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=protein_coding;locus_tag=PUW35_05805 CP118132.1 Protein Homology CDS 1223185 1223577 . + 0 ID=cds-WJG94086.1;Parent=gene-PUW35_05805;Dbxref=NCBI_GP:WJG94086.1;Name=WJG94086.1;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=PUW35_05805;product=flagellar protein FlhE;protein_id=WJG94086.1;transl_table=11 CP118132.1 Genbank gene 1223814 1224953 . + . ID=gene-PUW35_05810;Name=PUW35_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05810 CP118132.1 Protein Homology CDS 1223814 1224953 . + 0 ID=cds-WJG94087.1;Parent=gene-PUW35_05810;Dbxref=NCBI_GP:WJG94087.1;Name=WJG94087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=PUW35_05810;product=glycoside hydrolase family 105 protein;protein_id=WJG94087.1;transl_table=11 CP118132.1 Genbank pseudogene 1225007 1226877 . - . ID=gene-PUW35_05815;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=PUW35_05815;pseudo=true CP118132.1 Protein Homology CDS 1225007 1226877 . - 0 ID=cds-PUW35_05815;Parent=gene-PUW35_05815;Note=frameshifted;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=PUW35_05815;product=penicillin-binding protein 2;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1227066 1228799 . - . ID=gene-PUW35_05820;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=PUW35_05820 CP118132.1 Protein Homology CDS 1227066 1228799 . - 0 ID=cds-WJG94088.1;Parent=gene-PUW35_05820;Dbxref=NCBI_GP:WJG94088.1;Name=WJG94088.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=PUW35_05820;product=arginine--tRNA ligase;protein_id=WJG94088.1;transl_table=11 CP118132.1 Genbank gene 1229036 1229605 . + . ID=gene-PUW35_05825;Name=PUW35_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05825 CP118132.1 Protein Homology CDS 1229036 1229605 . + 0 ID=cds-WJG94089.1;Parent=gene-PUW35_05825;Dbxref=NCBI_GP:WJG94089.1;Name=WJG94089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=PUW35_05825;product=VOC family protein;protein_id=WJG94089.1;transl_table=11 CP118132.1 Genbank gene 1229625 1230371 . + . ID=gene-PUW35_05830;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=PUW35_05830 CP118132.1 Protein Homology CDS 1229625 1230371 . + 0 ID=cds-WJG94090.1;Parent=gene-PUW35_05830;Dbxref=NCBI_GP:WJG94090.1;Name=WJG94090.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=PUW35_05830;product=copper homeostasis protein CutC;protein_id=WJG94090.1;transl_table=11 CP118132.1 Genbank gene 1230607 1231578 . - . ID=gene-PUW35_05835;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=PUW35_05835 CP118132.1 Protein Homology CDS 1230607 1231578 . - 0 ID=cds-WJG94091.1;Parent=gene-PUW35_05835;Dbxref=NCBI_GP:WJG94091.1;Name=WJG94091.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=PUW35_05835;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WJG94091.1;transl_table=11 CP118132.1 Genbank gene 1231575 1232318 . - . ID=gene-PUW35_05840;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=PUW35_05840 CP118132.1 Protein Homology CDS 1231575 1232318 . - 0 ID=cds-WJG94092.1;Parent=gene-PUW35_05840;Dbxref=NCBI_GP:WJG94092.1;Name=WJG94092.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=PUW35_05840;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WJG94092.1;transl_table=11 CP118132.1 Genbank gene 1232359 1232754 . - . ID=gene-PUW35_05845;Name=PUW35_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05845 CP118132.1 Protein Homology CDS 1232359 1232754 . - 0 ID=cds-WJG94093.1;Parent=gene-PUW35_05845;Dbxref=NCBI_GP:WJG94093.1;Name=WJG94093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=PUW35_05845;product=MAPEG family protein;protein_id=WJG94093.1;transl_table=11 CP118132.1 Genbank gene 1232806 1233624 . - . ID=gene-PUW35_05850;Name=PUW35_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05850 CP118132.1 Protein Homology CDS 1232806 1233624 . - 0 ID=cds-WJG94094.1;Parent=gene-PUW35_05850;Dbxref=NCBI_GP:WJG94094.1;Name=WJG94094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=PUW35_05850;product=DUF72 domain-containing protein;protein_id=WJG94094.1;transl_table=11 CP118132.1 Genbank gene 1233621 1234187 . - . ID=gene-PUW35_05855;Name=PUW35_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05855 CP118132.1 Protein Homology CDS 1233621 1234187 . - 0 ID=cds-WJG94095.1;Parent=gene-PUW35_05855;Dbxref=NCBI_GP:WJG94095.1;Name=WJG94095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=PUW35_05855;product=hydrolase;protein_id=WJG94095.1;transl_table=11 CP118132.1 Genbank gene 1234512 1236284 . + . ID=gene-PUW35_05860;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=PUW35_05860 CP118132.1 Protein Homology CDS 1234512 1236284 . + 0 ID=cds-WJG94096.1;Parent=gene-PUW35_05860;Dbxref=NCBI_GP:WJG94096.1;Name=WJG94096.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=PUW35_05860;product=aspartate--tRNA ligase;protein_id=WJG94096.1;transl_table=11 CP118132.1 Genbank gene 1236387 1236839 . + . ID=gene-PUW35_05865;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=PUW35_05865 CP118132.1 Protein Homology CDS 1236387 1236839 . + 0 ID=cds-WJG94097.1;Parent=gene-PUW35_05865;Dbxref=NCBI_GP:WJG94097.1;Name=WJG94097.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=PUW35_05865;product=dihydroneopterin triphosphate diphosphatase;protein_id=WJG94097.1;transl_table=11 CP118132.1 Genbank gene 1236869 1237609 . + . ID=gene-PUW35_05870;Name=PUW35_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05870 CP118132.1 Protein Homology CDS 1236869 1237609 . + 0 ID=cds-WJG94098.1;Parent=gene-PUW35_05870;Dbxref=NCBI_GP:WJG94098.1;Name=WJG94098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=PUW35_05870;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WJG94098.1;transl_table=11 CP118132.1 Genbank gene 1237646 1238167 . + . ID=gene-PUW35_05875;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=PUW35_05875 CP118132.1 Protein Homology CDS 1237646 1238167 . + 0 ID=cds-WJG94099.1;Parent=gene-PUW35_05875;Dbxref=NCBI_GP:WJG94099.1;Name=WJG94099.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=PUW35_05875;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WJG94099.1;transl_table=11 CP118132.1 Genbank gene 1238169 1238768 . - . ID=gene-PUW35_05880;Name=PUW35_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05880 CP118132.1 Protein Homology CDS 1238169 1238768 . - 0 ID=cds-WJG94100.1;Parent=gene-PUW35_05880;Dbxref=NCBI_GP:WJG94100.1;Name=WJG94100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=PUW35_05880;product=YebB family permuted papain-like enzyme;protein_id=WJG94100.1;transl_table=11 CP118132.1 Genbank gene 1238977 1239669 . + . ID=gene-PUW35_05885;Name=PUW35_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05885 CP118132.1 Protein Homology CDS 1238977 1239669 . + 0 ID=cds-WJG94101.1;Parent=gene-PUW35_05885;Dbxref=NCBI_GP:WJG94101.1;Name=WJG94101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=PUW35_05885;product=hypothetical protein;protein_id=WJG94101.1;transl_table=11 CP118132.1 Genbank gene 1240029 1240640 . + . ID=gene-PUW35_05890;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=PUW35_05890 CP118132.1 Protein Homology CDS 1240029 1240640 . + 0 ID=cds-WJG94102.1;Parent=gene-PUW35_05890;Dbxref=NCBI_GP:WJG94102.1;Name=WJG94102.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=PUW35_05890;product=Holliday junction branch migration protein RuvA;protein_id=WJG94102.1;transl_table=11 CP118132.1 Genbank gene 1240649 1241659 . + . ID=gene-PUW35_05895;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=PUW35_05895 CP118132.1 Protein Homology CDS 1240649 1241659 . + 0 ID=cds-WJG94103.1;Parent=gene-PUW35_05895;Dbxref=NCBI_GP:WJG94103.1;Name=WJG94103.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=PUW35_05895;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WJG94103.1;transl_table=11 CP118132.1 Genbank gene 1241738 1242523 . - . ID=gene-PUW35_05900;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=PUW35_05900 CP118132.1 Protein Homology CDS 1241738 1242523 . - 0 ID=cds-WJG94104.1;Parent=gene-PUW35_05900;Dbxref=NCBI_GP:WJG94104.1;Name=WJG94104.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=PUW35_05900;product=zinc ABC transporter permease subunit ZnuB;protein_id=WJG94104.1;transl_table=11 CP118132.1 Genbank pseudogene 1242520 1243274 . - . ID=gene-PUW35_05905;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=pseudogene;locus_tag=PUW35_05905;pseudo=true CP118132.1 Protein Homology CDS 1242520 1243274 . - 0 ID=cds-PUW35_05905;Parent=gene-PUW35_05905;Note=frameshifted;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=PUW35_05905;product=zinc ABC transporter ATP-binding protein ZnuC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1243353 1244297 . + . ID=gene-PUW35_05910;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=PUW35_05910 CP118132.1 Protein Homology CDS 1243353 1244297 . + 0 ID=cds-WJG94105.1;Parent=gene-PUW35_05910;Dbxref=NCBI_GP:WJG94105.1;Name=WJG94105.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=PUW35_05910;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WJG94105.1;transl_table=11 CP118132.1 Genbank gene 1244313 1245632 . + . ID=gene-PUW35_05915;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=PUW35_05915 CP118132.1 Protein Homology CDS 1244313 1245632 . + 0 ID=cds-WJG94106.1;Parent=gene-PUW35_05915;Dbxref=NCBI_GP:WJG94106.1;Name=WJG94106.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=PUW35_05915;product=murein DD-endopeptidase MepM;protein_id=WJG94106.1;transl_table=11 CP118132.1 Genbank gene 1245749 1246720 . + . ID=gene-PUW35_05920;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=PUW35_05920 CP118132.1 Protein Homology CDS 1245749 1246720 . + 0 ID=cds-WJG94107.1;Parent=gene-PUW35_05920;Dbxref=NCBI_GP:WJG94107.1;Name=WJG94107.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=PUW35_05920;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WJG94107.1;transl_table=11 CP118132.1 Genbank gene 1246793 1248235 . - . ID=gene-PUW35_05925;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=PUW35_05925 CP118132.1 Protein Homology CDS 1246793 1248235 . - 0 ID=cds-WJG94108.1;Parent=gene-PUW35_05925;Dbxref=NCBI_GP:WJG94108.1;Name=WJG94108.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=PUW35_05925;product=pyruvate kinase;protein_id=WJG94108.1;transl_table=11 CP118132.1 Genbank gene 1248358 1249227 . - . ID=gene-PUW35_05930;Name=PUW35_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05930 CP118132.1 Protein Homology CDS 1248358 1249227 . - 0 ID=cds-WJG94109.1;Parent=gene-PUW35_05930;Dbxref=NCBI_GP:WJG94109.1;Name=WJG94109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=PUW35_05930;product=MurR/RpiR family transcriptional regulator;protein_id=WJG94109.1;transl_table=11 CP118132.1 Genbank gene 1249569 1251044 . + . ID=gene-PUW35_05935;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=PUW35_05935 CP118132.1 Protein Homology CDS 1249569 1251044 . + 0 ID=cds-WJG94110.1;Parent=gene-PUW35_05935;Dbxref=NCBI_GP:WJG94110.1;Name=WJG94110.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=PUW35_05935;product=glucose-6-phosphate dehydrogenase;protein_id=WJG94110.1;transl_table=11 CP118132.1 Genbank gene 1251279 1253090 . + . ID=gene-PUW35_05940;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=PUW35_05940 CP118132.1 Protein Homology CDS 1251279 1253090 . + 0 ID=cds-WJG94111.1;Parent=gene-PUW35_05940;Dbxref=NCBI_GP:WJG94111.1;Name=WJG94111.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=PUW35_05940;product=phosphogluconate dehydratase;protein_id=WJG94111.1;transl_table=11 CP118132.1 Genbank gene 1253128 1253769 . + . ID=gene-PUW35_05945;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=PUW35_05945 CP118132.1 Protein Homology CDS 1253128 1253769 . + 0 ID=cds-WJG94112.1;Parent=gene-PUW35_05945;Dbxref=NCBI_GP:WJG94112.1;Name=WJG94112.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=PUW35_05945;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WJG94112.1;transl_table=11 CP118132.1 Genbank gene 1253869 1255047 . - . ID=gene-PUW35_05950;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=PUW35_05950 CP118132.1 Protein Homology CDS 1253869 1255047 . - 0 ID=cds-WJG94113.1;Parent=gene-PUW35_05950;Dbxref=NCBI_GP:WJG94113.1;Name=WJG94113.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=PUW35_05950;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WJG94113.1;transl_table=11 CP118132.1 Genbank gene 1255178 1255468 . + . ID=gene-PUW35_05955;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=PUW35_05955 CP118132.1 Protein Homology CDS 1255178 1255468 . + 0 ID=cds-WJG94114.1;Parent=gene-PUW35_05955;Dbxref=NCBI_GP:WJG94114.1;Name=WJG94114.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=PUW35_05955;product=DNA damage-inducible protein YebG;protein_id=WJG94114.1;transl_table=11 CP118132.1 Genbank gene 1255536 1255889 . + . ID=gene-PUW35_05960;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=PUW35_05960 CP118132.1 Protein Homology CDS 1255536 1255889 . + 0 ID=cds-WJG94115.1;Parent=gene-PUW35_05960;Dbxref=NCBI_GP:WJG94115.1;Name=WJG94115.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=PUW35_05960;product=protein YebF;protein_id=WJG94115.1;transl_table=11 CP118132.1 Genbank pseudogene 1255983 1256641 . + . ID=gene-PUW35_05965;Name=PUW35_05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_05965;pseudo=true CP118132.1 Protein Homology CDS 1255983 1256641 . + 0 ID=cds-PUW35_05965;Parent=gene-PUW35_05965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=PUW35_05965;product=tellurite resistance TerB family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1256854 1258905 . + . ID=gene-PUW35_05970;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=PUW35_05970 CP118132.1 Protein Homology CDS 1256854 1258905 . + 0 ID=cds-WJG94116.1;Parent=gene-PUW35_05970;Dbxref=NCBI_GP:WJG94116.1;Name=WJG94116.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=PUW35_05970;product=oligopeptidase B;protein_id=WJG94116.1;transl_table=11 CP118132.1 Genbank gene 1258942 1259640 . - . ID=gene-PUW35_05975;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=PUW35_05975 CP118132.1 Protein Homology CDS 1258942 1259640 . - 0 ID=cds-WJG94117.1;Parent=gene-PUW35_05975;Dbxref=NCBI_GP:WJG94117.1;Name=WJG94117.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=PUW35_05975;product=exodeoxyribonuclease X;protein_id=WJG94117.1;transl_table=11 CP118132.1 Genbank gene 1259664 1260320 . - . ID=gene-PUW35_05980;Name=PUW35_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05980 CP118132.1 Protein Homology CDS 1259664 1260320 . - 0 ID=cds-WJG94118.1;Parent=gene-PUW35_05980;Dbxref=NCBI_GP:WJG94118.1;Name=WJG94118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=PUW35_05980;product=carbon-nitrogen hydrolase family protein;protein_id=WJG94118.1;transl_table=11 CP118132.1 Genbank gene 1260428 1260658 . - . ID=gene-PUW35_05985;Name=PUW35_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_05985 CP118132.1 Protein Homology CDS 1260428 1260658 . - 0 ID=cds-WJG94119.1;Parent=gene-PUW35_05985;Dbxref=NCBI_GP:WJG94119.1;Name=WJG94119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=PUW35_05985;product=DNA polymerase III subunit theta;protein_id=WJG94119.1;transl_table=11 CP118132.1 Genbank gene 1260796 1261170 . + . ID=gene-PUW35_05990;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=PUW35_05990 CP118132.1 Protein Homology CDS 1260796 1261170 . + 0 ID=cds-WJG94120.1;Parent=gene-PUW35_05990;Dbxref=NCBI_GP:WJG94120.1;Name=WJG94120.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=PUW35_05990;product=CopC domain-containing protein YobA;protein_id=WJG94120.1;transl_table=11 CP118132.1 Genbank gene 1261171 1262046 . + . ID=gene-PUW35_05995;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=PUW35_05995 CP118132.1 Protein Homology CDS 1261171 1262046 . + 0 ID=cds-WJG94121.1;Parent=gene-PUW35_05995;Dbxref=NCBI_GP:WJG94121.1;Name=WJG94121.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=PUW35_05995;product=copper homeostasis membrane protein CopD;protein_id=WJG94121.1;transl_table=11 CP118132.1 Genbank gene 1262063 1262416 . + . ID=gene-PUW35_06000;Name=PUW35_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06000 CP118132.1 Protein Homology CDS 1262063 1262416 . + 0 ID=cds-WJG94122.1;Parent=gene-PUW35_06000;Dbxref=NCBI_GP:WJG94122.1;Name=WJG94122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=PUW35_06000;product=YebY family protein;protein_id=WJG94122.1;transl_table=11 CP118132.1 Genbank gene 1262799 1263878 . - . ID=gene-PUW35_06005;Name=PUW35_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06005 CP118132.1 Protein Homology CDS 1262799 1263878 . - 0 ID=cds-WJG94123.1;Parent=gene-PUW35_06005;Dbxref=NCBI_GP:WJG94123.1;Name=WJG94123.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=PUW35_06005;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WJG94123.1;transl_table=11 CP118132.1 Genbank gene 1263853 1264131 . - . ID=gene-PUW35_06010;Name=PUW35_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06010 CP118132.1 Protein Homology CDS 1263853 1264131 . - 0 ID=cds-WJG94124.1;Parent=gene-PUW35_06010;Dbxref=NCBI_GP:WJG94124.1;Name=WJG94124.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575998.1;locus_tag=PUW35_06010;product=excisionase;protein_id=WJG94124.1;transl_table=11 CP118132.1 Genbank gene 1264192 1264620 . - . ID=gene-PUW35_06015;Name=PUW35_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06015 CP118132.1 Protein Homology CDS 1264192 1264620 . - 0 ID=cds-WJG94125.1;Parent=gene-PUW35_06015;Dbxref=NCBI_GP:WJG94125.1;Name=WJG94125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743304.1;locus_tag=PUW35_06015;product=hypothetical protein;protein_id=WJG94125.1;transl_table=11 CP118132.1 Genbank gene 1264719 1264904 . - . ID=gene-PUW35_06020;Name=PUW35_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06020 CP118132.1 Protein Homology CDS 1264719 1264904 . - 0 ID=cds-WJG94126.1;Parent=gene-PUW35_06020;Dbxref=NCBI_GP:WJG94126.1;Name=WJG94126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280163.1;locus_tag=PUW35_06020;product=DUF1187 family protein;protein_id=WJG94126.1;transl_table=11 CP118132.1 Genbank gene 1264951 1265781 . - . ID=gene-PUW35_06025;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=PUW35_06025 CP118132.1 Protein Homology CDS 1264951 1265781 . - 0 ID=cds-WJG95036.1;Parent=gene-PUW35_06025;Dbxref=NCBI_GP:WJG95036.1;Name=WJG95036.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126028.1;locus_tag=PUW35_06025;product=recombination protein RecT;protein_id=WJG95036.1;transl_table=11 CP118132.1 Genbank pseudogene 1265774 1268462 . - . ID=gene-PUW35_06030;Name=recE;gbkey=Gene;gene=recE;gene_biotype=pseudogene;locus_tag=PUW35_06030;pseudo=true CP118132.1 Protein Homology CDS 1265774 1268462 . - 0 ID=cds-PUW35_06030;Parent=gene-PUW35_06030;Note=frameshifted;Ontology_term=GO:0090305,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' exodeoxyribonuclease activity|0051908||IEA;go_process=nucleic acid phosphodiester bond hydrolysis|0090305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=PUW35_06030;product=exodeoxyribonuclease VIII;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1268603 1268938 . - . ID=gene-PUW35_06035;Name=PUW35_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06035 CP118132.1 Protein Homology CDS 1268603 1268938 . - 0 ID=cds-WJG94127.1;Parent=gene-PUW35_06035;Dbxref=NCBI_GP:WJG94127.1;Name=WJG94127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799630.1;locus_tag=PUW35_06035;product=hypothetical protein;protein_id=WJG94127.1;transl_table=11 CP118132.1 Genbank gene 1269014 1269220 . - . ID=gene-PUW35_06040;Name=PUW35_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06040 CP118132.1 Protein Homology CDS 1269014 1269220 . - 0 ID=cds-WJG94128.1;Parent=gene-PUW35_06040;Dbxref=NCBI_GP:WJG94128.1;Name=WJG94128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=PUW35_06040;product=cell division inhibitor protein;protein_id=WJG94128.1;transl_table=11 CP118132.1 Genbank gene 1269224 1269499 . - . ID=gene-PUW35_06045;Name=PUW35_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06045 CP118132.1 Protein Homology CDS 1269224 1269499 . - 0 ID=cds-WJG94129.1;Parent=gene-PUW35_06045;Dbxref=NCBI_GP:WJG94129.1;Name=WJG94129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103933.1;locus_tag=PUW35_06045;product=hypothetical protein;protein_id=WJG94129.1;transl_table=11 CP118132.1 Genbank gene 1269834 1270064 . + . ID=gene-PUW35_06050;Name=PUW35_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06050 CP118132.1 GeneMarkS-2+ CDS 1269834 1270064 . + 0 ID=cds-WJG94130.1;Parent=gene-PUW35_06050;Dbxref=NCBI_GP:WJG94130.1;Name=WJG94130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_06050;product=hypothetical protein;protein_id=WJG94130.1;transl_table=11 CP118132.1 Genbank gene 1270506 1270904 . - . ID=gene-PUW35_06055;Name=PUW35_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06055 CP118132.1 Protein Homology CDS 1270506 1270904 . - 0 ID=cds-WJG94131.1;Parent=gene-PUW35_06055;Dbxref=NCBI_GP:WJG94131.1;Name=WJG94131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574209.1;locus_tag=PUW35_06055;product=helix-turn-helix domain-containing protein;protein_id=WJG94131.1;transl_table=11 CP118132.1 Genbank gene 1271003 1271257 . + . ID=gene-PUW35_06060;Name=PUW35_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06060 CP118132.1 Protein Homology CDS 1271003 1271257 . + 0 ID=cds-WJG94132.1;Parent=gene-PUW35_06060;Dbxref=NCBI_GP:WJG94132.1;Name=WJG94132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462799.1;locus_tag=PUW35_06060;product=helix-turn-helix transcriptional regulator;protein_id=WJG94132.1;transl_table=11 CP118132.1 Genbank gene 1271244 1271738 . + . ID=gene-PUW35_06065;Name=PUW35_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06065 CP118132.1 Protein Homology CDS 1271244 1271738 . + 0 ID=cds-WJG94133.1;Parent=gene-PUW35_06065;Dbxref=NCBI_GP:WJG94133.1;Name=WJG94133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533160.1;locus_tag=PUW35_06065;product=toxin YdaT family protein;protein_id=WJG94133.1;transl_table=11 CP118132.1 Genbank gene 1271785 1272783 . + . ID=gene-PUW35_06070;Name=PUW35_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06070 CP118132.1 Protein Homology CDS 1271785 1272783 . + 0 ID=cds-WJG94134.1;Parent=gene-PUW35_06070;Dbxref=NCBI_GP:WJG94134.1;Name=WJG94134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729543.1;locus_tag=PUW35_06070;product=DUF1376 domain-containing protein;protein_id=WJG94134.1;transl_table=11 CP118132.1 Genbank gene 1272695 1273237 . + . ID=gene-PUW35_06075;Name=PUW35_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06075 CP118132.1 Protein Homology CDS 1272695 1273237 . + 0 ID=cds-WJG94135.1;Parent=gene-PUW35_06075;Dbxref=NCBI_GP:WJG94135.1;Name=WJG94135.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307798.1;locus_tag=PUW35_06075;product=replication protein P;protein_id=WJG94135.1;transl_table=11 CP118132.1 Genbank gene 1273250 1273645 . + . ID=gene-PUW35_06080;Name=PUW35_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06080 CP118132.1 Protein Homology CDS 1273250 1273645 . + 0 ID=cds-WJG94136.1;Parent=gene-PUW35_06080;Dbxref=NCBI_GP:WJG94136.1;Name=WJG94136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=PUW35_06080;product=DUF977 family protein;protein_id=WJG94136.1;transl_table=11 CP118132.1 Genbank gene 1273932 1275062 . - . ID=gene-PUW35_06085;Name=PUW35_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06085 CP118132.1 Protein Homology CDS 1273932 1275062 . - 0 ID=cds-WJG94137.1;Parent=gene-PUW35_06085;Dbxref=NCBI_GP:WJG94137.1;Name=WJG94137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=PUW35_06085;product=GGDEF domain-containing protein;protein_id=WJG94137.1;transl_table=11 CP118132.1 Genbank gene 1275459 1277438 . + . ID=gene-PUW35_06090;Name=PUW35_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06090 CP118132.1 Protein Homology CDS 1275459 1277438 . + 0 ID=cds-WJG94138.1;Parent=gene-PUW35_06090;Dbxref=NCBI_GP:WJG94138.1;Name=WJG94138.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078314.1;locus_tag=PUW35_06090;product=alkyl sulfatase dimerization domain-containing protein;protein_id=WJG94138.1;transl_table=11 CP118132.1 Genbank gene 1277757 1277855 . + . ID=gene-PUW35_06095;Name=PUW35_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06095 CP118132.1 Protein Homology CDS 1277757 1277855 . + 0 ID=cds-WJG95037.1;Parent=gene-PUW35_06095;Dbxref=NCBI_GP:WJG95037.1;Name=WJG95037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=PUW35_06095;product=hypothetical protein;protein_id=WJG95037.1;transl_table=11 CP118132.1 Genbank gene 1278157 1278375 . + . ID=gene-PUW35_06100;Name=PUW35_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06100 CP118132.1 Protein Homology CDS 1278157 1278375 . + 0 ID=cds-WJG94139.1;Parent=gene-PUW35_06100;Dbxref=NCBI_GP:WJG94139.1;Name=WJG94139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524708.1;locus_tag=PUW35_06100;product=hypothetical protein;protein_id=WJG94139.1;transl_table=11 CP118132.1 Genbank gene 1278439 1279038 . + . ID=gene-PUW35_06105;Name=PUW35_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06105 CP118132.1 Protein Homology CDS 1278439 1279038 . + 0 ID=cds-WJG94140.1;Parent=gene-PUW35_06105;Dbxref=NCBI_GP:WJG94140.1;Name=WJG94140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=PUW35_06105;product=DUF1367 family protein;protein_id=WJG94140.1;transl_table=11 CP118132.1 Genbank gene 1279041 1279262 . + . ID=gene-PUW35_06110;Name=PUW35_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06110 CP118132.1 Protein Homology CDS 1279041 1279262 . + 0 ID=cds-WJG95038.1;Parent=gene-PUW35_06110;Dbxref=NCBI_GP:WJG95038.1;Name=WJG95038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096570.1;locus_tag=PUW35_06110;product=recombination protein NinG;protein_id=WJG95038.1;transl_table=11 CP118132.1 Genbank pseudogene 1279259 1279395 . + . ID=gene-PUW35_06115;Name=PUW35_06115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06115;pseudo=true CP118132.1 Protein Homology CDS 1279259 1279395 . + 0 ID=cds-PUW35_06115;Parent=gene-PUW35_06115;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971070.1;locus_tag=PUW35_06115;product=YlcG family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1279392 1280081 . + . ID=gene-PUW35_06120;Name=PUW35_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06120 CP118132.1 Protein Homology CDS 1279392 1280081 . + 0 ID=cds-WJG94141.1;Parent=gene-PUW35_06120;Dbxref=NCBI_GP:WJG94141.1;Name=WJG94141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151283.1;locus_tag=PUW35_06120;product=bacteriophage antitermination protein Q;protein_id=WJG94141.1;transl_table=11 CP118132.1 Genbank gene 1280175 1280702 . + . ID=gene-PUW35_06125;Name=PUW35_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06125 CP118132.1 Protein Homology CDS 1280175 1280702 . + 0 ID=cds-WJG94142.1;Parent=gene-PUW35_06125;Dbxref=NCBI_GP:WJG94142.1;Name=WJG94142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971762.1;locus_tag=PUW35_06125;product=hypothetical protein;protein_id=WJG94142.1;transl_table=11 CP118132.1 Genbank gene 1281076 1281525 . - . ID=gene-PUW35_06130;Name=PUW35_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06130 CP118132.1 Protein Homology CDS 1281076 1281525 . - 0 ID=cds-WJG94143.1;Parent=gene-PUW35_06130;Dbxref=NCBI_GP:WJG94143.1;Name=WJG94143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460000.1;locus_tag=PUW35_06130;product=hypothetical protein;protein_id=WJG94143.1;transl_table=11 CP118132.1 Genbank gene 1281886 1282572 . - . ID=gene-PUW35_06135;Name=gtgA;gbkey=Gene;gene=gtgA;gene_biotype=protein_coding;locus_tag=PUW35_06135 CP118132.1 Protein Homology CDS 1281886 1282572 . - 0 ID=cds-WJG94144.1;Parent=gene-PUW35_06135;Dbxref=NCBI_GP:WJG94144.1;Name=WJG94144.1;gbkey=CDS;gene=gtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461550.1;locus_tag=PUW35_06135;product=type III secretion system effector protease GtgA;protein_id=WJG94144.1;transl_table=11 CP118132.1 Genbank gene 1282848 1283177 . + . ID=gene-PUW35_06140;Name=PUW35_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06140 CP118132.1 Protein Homology CDS 1282848 1283177 . + 0 ID=cds-WJG95039.1;Parent=gene-PUW35_06140;Dbxref=NCBI_GP:WJG95039.1;Name=WJG95039.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461549.1;locus_tag=PUW35_06140;product=phage holin%2C lambda family;protein_id=WJG95039.1;transl_table=11 CP118132.1 Genbank gene 1283161 1283613 . + . ID=gene-PUW35_06145;Name=PUW35_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06145 CP118132.1 Protein Homology CDS 1283161 1283613 . + 0 ID=cds-WJG94145.1;Parent=gene-PUW35_06145;Dbxref=NCBI_GP:WJG94145.1;Name=WJG94145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460003.1;locus_tag=PUW35_06145;product=lysozyme;protein_id=WJG94145.1;transl_table=11 CP118132.1 Genbank gene 1283631 1284110 . + . ID=gene-PUW35_06150;Name=PUW35_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06150 CP118132.1 Protein Homology CDS 1283631 1284110 . + 0 ID=cds-WJG94146.1;Parent=gene-PUW35_06150;Dbxref=NCBI_GP:WJG94146.1;Name=WJG94146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460004.1;locus_tag=PUW35_06150;product=lysis protein;protein_id=WJG94146.1;transl_table=11 CP118132.1 Genbank pseudogene 1284318 1284850 . + . ID=gene-PUW35_06155;Name=PUW35_06155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06155;pseudo=true CP118132.1 Protein Homology CDS 1284318 1284850 . + 0 ID=cds-PUW35_06155;Parent=gene-PUW35_06155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460005.1;locus_tag=PUW35_06155;product=DUF1441 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1284807 1286945 . + . ID=gene-PUW35_06160;Name=PUW35_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06160 CP118132.1 Protein Homology CDS 1284807 1286945 . + 0 ID=cds-WJG95040.1;Parent=gene-PUW35_06160;Dbxref=NCBI_GP:WJG95040.1;Name=WJG95040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460006.1;locus_tag=PUW35_06160;product=phage terminase large subunit family protein;protein_id=WJG95040.1;transl_table=11 CP118132.1 Genbank gene 1286942 1287148 . + . ID=gene-PUW35_06165;Name=PUW35_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06165 CP118132.1 Protein Homology CDS 1286942 1287148 . + 0 ID=cds-WJG94147.1;Parent=gene-PUW35_06165;Dbxref=NCBI_GP:WJG94147.1;Name=WJG94147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196190.1;locus_tag=PUW35_06165;product=primosomal replication protein PriB/PriC domain protein;protein_id=WJG94147.1;transl_table=11 CP118132.1 Genbank gene 1287145 1288692 . + . ID=gene-PUW35_06170;Name=PUW35_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06170 CP118132.1 Protein Homology CDS 1287145 1288692 . + 0 ID=cds-WJG94148.1;Parent=gene-PUW35_06170;Dbxref=NCBI_GP:WJG94148.1;Name=WJG94148.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009205.1;locus_tag=PUW35_06170;product=phage portal protein;protein_id=WJG94148.1;transl_table=11 CP118132.1 Genbank pseudogene 1288616 1290695 . + . ID=gene-PUW35_06175;Name=PUW35_06175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06175;pseudo=true CP118132.1 Protein Homology CDS 1288616 1290695 . + 0 ID=cds-PUW35_06175;Parent=gene-PUW35_06175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460008.1;locus_tag=PUW35_06175;product=Clp protease ClpP;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1290786 1291109 . + . ID=gene-PUW35_06180;Name=PUW35_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06180 CP118132.1 Protein Homology CDS 1290786 1291109 . + 0 ID=cds-WJG94149.1;Parent=gene-PUW35_06180;Dbxref=NCBI_GP:WJG94149.1;Name=WJG94149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460009.1;locus_tag=PUW35_06180;product=DUF2190 family protein;protein_id=WJG94149.1;transl_table=11 CP118132.1 Genbank gene 1291102 1291401 . + . ID=gene-PUW35_06185;Name=PUW35_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06185 CP118132.1 Protein Homology CDS 1291102 1291401 . + 0 ID=cds-WJG94150.1;Parent=gene-PUW35_06185;Dbxref=NCBI_GP:WJG94150.1;Name=WJG94150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460010.1;locus_tag=PUW35_06185;product=ATP-binding protein;protein_id=WJG94150.1;transl_table=11 CP118132.1 Genbank gene 1291382 1291948 . + . ID=gene-PUW35_06190;Name=PUW35_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06190 CP118132.1 Protein Homology CDS 1291382 1291948 . + 0 ID=cds-WJG94151.1;Parent=gene-PUW35_06190;Dbxref=NCBI_GP:WJG94151.1;Name=WJG94151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460011.1;locus_tag=PUW35_06190;product=phage tail protein;protein_id=WJG94151.1;transl_table=11 CP118132.1 Genbank gene 1291945 1292346 . + . ID=gene-PUW35_06195;Name=PUW35_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06195 CP118132.1 Protein Homology CDS 1291945 1292346 . + 0 ID=cds-WJG94152.1;Parent=gene-PUW35_06195;Dbxref=NCBI_GP:WJG94152.1;Name=WJG94152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460012.1;locus_tag=PUW35_06195;product=phage minor tail U family protein;protein_id=WJG94152.1;transl_table=11 CP118132.1 Genbank gene 1292358 1293107 . + . ID=gene-PUW35_06200;Name=PUW35_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06200 CP118132.1 Protein Homology CDS 1292358 1293107 . + 0 ID=cds-WJG94153.1;Parent=gene-PUW35_06200;Dbxref=NCBI_GP:WJG94153.1;Name=WJG94153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460013.1;locus_tag=PUW35_06200;product=phage tail protein;protein_id=WJG94153.1;transl_table=11 CP118132.1 Genbank gene 1293153 1293551 . + . ID=gene-PUW35_06205;Name=PUW35_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06205 CP118132.1 Protein Homology CDS 1293153 1293551 . + 0 ID=cds-WJG94154.1;Parent=gene-PUW35_06205;Dbxref=NCBI_GP:WJG94154.1;Name=WJG94154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460014.1;locus_tag=PUW35_06205;product=phage minor tail protein G;protein_id=WJG94154.1;transl_table=11 CP118132.1 Genbank gene 1293548 1293877 . + . ID=gene-PUW35_06210;Name=PUW35_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06210 CP118132.1 Protein Homology CDS 1293548 1293877 . + 0 ID=cds-WJG95041.1;Parent=gene-PUW35_06210;Dbxref=NCBI_GP:WJG95041.1;Name=WJG95041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460015.1;locus_tag=PUW35_06210;product=phage tail assembly protein T;protein_id=WJG95041.1;transl_table=11 CP118132.1 Genbank gene 1293957 1296944 . + . ID=gene-PUW35_06215;Name=PUW35_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06215 CP118132.1 Protein Homology CDS 1293957 1296944 . + 0 ID=cds-WJG95042.1;Parent=gene-PUW35_06215;Dbxref=NCBI_GP:WJG95042.1;Name=WJG95042.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460016.1;locus_tag=PUW35_06215;product=phage tail tape measure protein;protein_id=WJG95042.1;transl_table=11 CP118132.1 Genbank gene 1296941 1297273 . + . ID=gene-PUW35_06220;Name=PUW35_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06220 CP118132.1 Protein Homology CDS 1296941 1297273 . + 0 ID=cds-WJG94155.1;Parent=gene-PUW35_06220;Dbxref=NCBI_GP:WJG94155.1;Name=WJG94155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460017.1;locus_tag=PUW35_06220;product=phage tail protein;protein_id=WJG94155.1;transl_table=11 CP118132.1 Genbank gene 1297372 1297869 . + . ID=gene-PUW35_06225;Name=PUW35_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06225 CP118132.1 Protein Homology CDS 1297372 1297869 . + 0 ID=cds-WJG94156.1;Parent=gene-PUW35_06225;Dbxref=NCBI_GP:WJG94156.1;Name=WJG94156.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410972.1;locus_tag=PUW35_06225;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WJG94156.1;transl_table=11 CP118132.1 Genbank gene 1297986 1298519 . - . ID=gene-PUW35_06230;Name=sodC1;gbkey=Gene;gene=sodC1;gene_biotype=protein_coding;gene_synonym=sodCI;locus_tag=PUW35_06230 CP118132.1 Protein Homology CDS 1297986 1298519 . - 0 ID=cds-WJG94157.1;Parent=gene-PUW35_06230;Dbxref=NCBI_GP:WJG94157.1;Name=WJG94157.1;gbkey=CDS;gene=sodC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460019.1;locus_tag=PUW35_06230;product=superoxide dismutase [Cu-Zn] SodC1;protein_id=WJG94157.1;transl_table=11 CP118132.1 Genbank gene 1298609 1299304 . + . ID=gene-PUW35_06235;Name=PUW35_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06235 CP118132.1 Protein Homology CDS 1298609 1299304 . + 0 ID=cds-WJG94158.1;Parent=gene-PUW35_06235;Dbxref=NCBI_GP:WJG94158.1;Name=WJG94158.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460020.1;locus_tag=PUW35_06235;product=phage minor tail protein L;protein_id=WJG94158.1;transl_table=11 CP118132.1 Genbank gene 1299314 1300045 . + . ID=gene-PUW35_06240;Name=PUW35_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06240 CP118132.1 Protein Homology CDS 1299314 1300045 . + 0 ID=cds-WJG94159.1;Parent=gene-PUW35_06240;Dbxref=NCBI_GP:WJG94159.1;Name=WJG94159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606352.1;locus_tag=PUW35_06240;product=C40 family peptidase;protein_id=WJG94159.1;transl_table=11 CP118132.1 Genbank gene 1299949 1300653 . + . ID=gene-PUW35_06245;Name=PUW35_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06245 CP118132.1 Protein Homology CDS 1299949 1300653 . + 0 ID=cds-WJG94160.1;Parent=gene-PUW35_06245;Dbxref=NCBI_GP:WJG94160.1;Name=WJG94160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460022.1;locus_tag=PUW35_06245;product=tail assembly protein;protein_id=WJG94160.1;transl_table=11 CP118132.1 Genbank pseudogene 1300725 1303176 . + . ID=gene-PUW35_06250;Name=PUW35_06250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06250;pseudo=true CP118132.1 Protein Homology CDS 1300725 1303176 . + 0 ID=cds-PUW35_06250;Parent=gene-PUW35_06250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=PUW35_06250;product=host specificity protein J;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1303246 1303428 . + . ID=gene-PUW35_06255;Name=PUW35_06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06255;pseudo=true CP118132.1 Protein Homology CDS 1303246 1303428 . + 0 ID=cds-PUW35_06255;Parent=gene-PUW35_06255;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020885.2;locus_tag=PUW35_06255;product=DUF1983 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1303486 1304079 . + . ID=gene-PUW35_06260;Name=PUW35_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06260 CP118132.1 Protein Homology CDS 1303486 1304079 . + 0 ID=cds-WJG95043.1;Parent=gene-PUW35_06260;Dbxref=NCBI_GP:WJG95043.1;Name=WJG95043.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023837.2;locus_tag=PUW35_06260;product=hypothetical protein;protein_id=WJG95043.1;transl_table=11 CP118132.1 Genbank gene 1304118 1304360 . + . ID=gene-PUW35_06265;Name=PUW35_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06265 CP118132.1 Protein Homology CDS 1304118 1304360 . + 0 ID=cds-WJG94161.1;Parent=gene-PUW35_06265;Dbxref=NCBI_GP:WJG94161.1;Name=WJG94161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178849.1;locus_tag=PUW35_06265;product=hypothetical protein;protein_id=WJG94161.1;transl_table=11 CP118132.1 Genbank pseudogene 1304414 1306381 . + . ID=gene-PUW35_06270;Name=PUW35_06270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06270;pseudo=true CP118132.1 Protein Homology CDS 1304414 1306381 . + 0 ID=cds-PUW35_06270;Parent=gene-PUW35_06270;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=PUW35_06270;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1306381 1306950 . + . ID=gene-PUW35_06275;Name=PUW35_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06275 CP118132.1 Protein Homology CDS 1306381 1306950 . + 0 ID=cds-WJG94162.1;Parent=gene-PUW35_06275;Dbxref=NCBI_GP:WJG94162.1;Name=WJG94162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143180.1;locus_tag=PUW35_06275;product=tail fiber assembly protein;protein_id=WJG94162.1;transl_table=11 CP118132.1 Genbank gene 1307152 1307874 . - . ID=gene-PUW35_06280;Name=sopE;gbkey=Gene;gene=sopE;gene_biotype=protein_coding;locus_tag=PUW35_06280 CP118132.1 Protein Homology CDS 1307152 1307874 . - 0 ID=cds-WJG94163.1;Parent=gene-PUW35_06280;Dbxref=NCBI_GP:WJG94163.1;Name=WJG94163.1;gbkey=CDS;gene=sopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161707.1;locus_tag=PUW35_06280;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE;protein_id=WJG94163.1;transl_table=11 CP118132.1 Genbank pseudogene 1308084 1308325 . + . ID=gene-PUW35_06285;Name=PUW35_06285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06285;pseudo=true CP118132.1 Protein Homology CDS 1308084 1308325 . + 0 ID=cds-PUW35_06285;Parent=gene-PUW35_06285;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239587.1;locus_tag=PUW35_06285;product=recombinase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1308354 1309154 . - . ID=gene-PUW35_06290;Name=PUW35_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06290 CP118132.1 Protein Homology CDS 1308354 1309154 . - 0 ID=cds-WJG94164.1;Parent=gene-PUW35_06290;Dbxref=NCBI_GP:WJG94164.1;Name=WJG94164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586172.1;locus_tag=PUW35_06290;product=hypothetical protein;protein_id=WJG94164.1;transl_table=11 CP118132.1 Genbank pseudogene 1310099 1311021 . - . ID=gene-PUW35_06295;Name=PUW35_06295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06295;pseudo=true CP118132.1 Protein Homology CDS 1310099 1311021 . - 0 ID=cds-PUW35_06295;Parent=gene-PUW35_06295;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=PUW35_06295;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1311285 1311746 . - . ID=gene-PUW35_06300;Name=PUW35_06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06300;pseudo=true CP118132.1 Protein Homology CDS 1311285 1311746 . - 0 ID=cds-PUW35_06300;Parent=gene-PUW35_06300;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023715.1;locus_tag=PUW35_06300;product=DNA breaking-rejoining protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1311735 1311926 . + . ID=gene-PUW35_06305;Name=PUW35_06305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06305;pseudo=true CP118132.1 Protein Homology CDS 1311735 1311926 . + 0 ID=cds-PUW35_06305;Parent=gene-PUW35_06305;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=PUW35_06305;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1311980 1312511 . + . ID=gene-PUW35_06310;Name=PUW35_06310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06310;pseudo=true CP118132.1 Protein Homology CDS 1311980 1312511 . + 0 ID=cds-PUW35_06310;Parent=gene-PUW35_06310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=PUW35_06310;product=DUF2514 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1312768 1312935 . - . ID=gene-PUW35_06315;Name=PUW35_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06315 CP118132.1 Protein Homology CDS 1312768 1312935 . - 0 ID=cds-WJG94165.1;Parent=gene-PUW35_06315;Dbxref=NCBI_GP:WJG94165.1;Name=WJG94165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=PUW35_06315;product=lytic enzyme;protein_id=WJG94165.1;transl_table=11 CP118132.1 Genbank gene 1312999 1313187 . - . ID=gene-PUW35_06320;Name=PUW35_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06320 CP118132.1 Protein Homology CDS 1312999 1313187 . - 0 ID=cds-WJG94166.1;Parent=gene-PUW35_06320;Dbxref=NCBI_GP:WJG94166.1;Name=WJG94166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=PUW35_06320;product=hypothetical protein;protein_id=WJG94166.1;transl_table=11 CP118132.1 Genbank gene 1313242 1313733 . + . ID=gene-PUW35_06325;Name=PUW35_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06325 CP118132.1 Protein Homology CDS 1313242 1313733 . + 0 ID=cds-WJG94167.1;Parent=gene-PUW35_06325;Dbxref=NCBI_GP:WJG94167.1;Name=WJG94167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=PUW35_06325;product=DUF1441 family protein;protein_id=WJG94167.1;transl_table=11 CP118132.1 Genbank pseudogene 1313720 1314287 . + . ID=gene-PUW35_06330;Name=PUW35_06330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06330;pseudo=true CP118132.1 Protein Homology CDS 1313720 1314287 . + 0 ID=cds-PUW35_06330;Parent=gene-PUW35_06330;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=PUW35_06330;product=phage terminase large subunit family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1314286 1315516 . + . ID=gene-PUW35_06335;Name=PUW35_06335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06335;pseudo=true CP118132.1 Protein Homology CDS 1314286 1315516 . + 0 ID=cds-PUW35_06335;Parent=gene-PUW35_06335;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=PUW35_06335;product=tail fiber protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1315526 1315813 . + . ID=gene-PUW35_06340;Name=PUW35_06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06340;pseudo=true CP118132.1 Protein Homology CDS 1315526 1315813 . + 0 ID=cds-PUW35_06340;Parent=gene-PUW35_06340;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013798.2;locus_tag=PUW35_06340;product=macro domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1315826 1316337 . + . ID=gene-PUW35_06345;Name=PUW35_06345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06345;pseudo=true CP118132.1 Protein Homology CDS 1315826 1316337 . + 0 ID=cds-PUW35_06345;Parent=gene-PUW35_06345;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=PUW35_06345;product=tail fiber assembly protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1316434 1316634 . - . ID=gene-PUW35_06350;Name=PUW35_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06350 CP118132.1 Protein Homology CDS 1316434 1316634 . - 0 ID=cds-WJG94168.1;Parent=gene-PUW35_06350;Dbxref=NCBI_GP:WJG94168.1;Name=WJG94168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=PUW35_06350;product=PagK family vesicle-borne virulence factor;protein_id=WJG94168.1;transl_table=11 CP118132.1 Genbank pseudogene 1317024 1317204 . - . ID=gene-PUW35_06355;Name=PUW35_06355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06355;pseudo=true CP118132.1 Protein Homology CDS 1317024 1317204 . - 0 ID=cds-PUW35_06355;Parent=gene-PUW35_06355;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=PUW35_06355;product=IS3 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1317204 1317329 . + . ID=gene-PUW35_06360;Name=PUW35_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06360 CP118132.1 Protein Homology CDS 1317204 1317329 . + 0 ID=cds-WJG94169.1;Parent=gene-PUW35_06360;Dbxref=NCBI_GP:WJG94169.1;Name=WJG94169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=PUW35_06360;product=arsenic transporter;protein_id=WJG94169.1;transl_table=11 CP118132.1 Genbank gene 1317843 1317989 . - . ID=gene-PUW35_06365;Name=PUW35_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06365 CP118132.1 Protein Homology CDS 1317843 1317989 . - 0 ID=cds-WJG94170.1;Parent=gene-PUW35_06365;Dbxref=NCBI_GP:WJG94170.1;Name=WJG94170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537204.1;locus_tag=PUW35_06365;product=hypothetical protein;protein_id=WJG94170.1;transl_table=11 CP118132.1 Genbank gene 1317983 1318150 . + . ID=gene-PUW35_06370;Name=PUW35_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06370 CP118132.1 Protein Homology CDS 1317983 1318150 . + 0 ID=cds-WJG94171.1;Parent=gene-PUW35_06370;Dbxref=NCBI_GP:WJG94171.1;Name=WJG94171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014814.2;locus_tag=PUW35_06370;product=helix-turn-helix domain-containing protein;protein_id=WJG94171.1;transl_table=11 CP118132.1 Genbank gene 1318477 1319091 . - . ID=gene-PUW35_06375;Name=PUW35_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06375 CP118132.1 Protein Homology CDS 1318477 1319091 . - 0 ID=cds-WJG94172.1;Parent=gene-PUW35_06375;Dbxref=NCBI_GP:WJG94172.1;Name=WJG94172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=PUW35_06375;product=disulfide bond formation protein B;protein_id=WJG94172.1;transl_table=11 CP118132.1 Genbank gene 1319101 1319259 . - . ID=gene-PUW35_06380;Name=PUW35_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06380 CP118132.1 Protein Homology CDS 1319101 1319259 . - 0 ID=cds-WJG94173.1;Parent=gene-PUW35_06380;Dbxref=NCBI_GP:WJG94173.1;Name=WJG94173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=PUW35_06380;product=DUF5993 family protein;protein_id=WJG94173.1;transl_table=11 CP118132.1 Genbank gene 1319392 1320306 . - . ID=gene-PUW35_06385;Name=PUW35_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06385 CP118132.1 Protein Homology CDS 1319392 1320306 . - 0 ID=cds-WJG94174.1;Parent=gene-PUW35_06385;Dbxref=NCBI_GP:WJG94174.1;Name=WJG94174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=PUW35_06385;product=DMT family transporter;protein_id=WJG94174.1;transl_table=11 CP118132.1 Genbank pseudogene 1321557 1322023 . - . ID=gene-PUW35_06390;Name=PUW35_06390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06390;pseudo=true CP118132.1 Protein Homology CDS 1321557 1322023 . - 0 ID=cds-PUW35_06390;Parent=gene-PUW35_06390;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=PUW35_06390;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1322093 1323300 . + . ID=gene-PUW35_06395;Name=PUW35_06395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06395;pseudo=true CP118132.1 Protein Homology CDS 1322093 1323300 . + 0 ID=cds-PUW35_06395;Parent=gene-PUW35_06395;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=PUW35_06395;product=IS256 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1323446 1323586 . - . ID=gene-PUW35_06400;Name=PUW35_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06400 CP118132.1 Protein Homology CDS 1323446 1323586 . - 0 ID=cds-WJG94175.1;Parent=gene-PUW35_06400;Dbxref=NCBI_GP:WJG94175.1;Name=WJG94175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=PUW35_06400;product=hypothetical protein;protein_id=WJG94175.1;transl_table=11 CP118132.1 Genbank gene 1323752 1324021 . - . ID=gene-PUW35_06405;Name=PUW35_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06405 CP118132.1 Protein Homology CDS 1323752 1324021 . - 0 ID=cds-WJG94176.1;Parent=gene-PUW35_06405;Dbxref=NCBI_GP:WJG94176.1;Name=WJG94176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=PUW35_06405;product=hypothetical protein;protein_id=WJG94176.1;transl_table=11 CP118132.1 Genbank gene 1324394 1324813 . + . ID=gene-PUW35_06410;Name=PUW35_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06410 CP118132.1 Protein Homology CDS 1324394 1324813 . + 0 ID=cds-WJG94177.1;Parent=gene-PUW35_06410;Dbxref=NCBI_GP:WJG94177.1;Name=WJG94177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=PUW35_06410;product=GNAT family N-acetyltransferase;protein_id=WJG94177.1;transl_table=11 CP118132.1 Genbank gene 1325186 1325662 . - . ID=gene-PUW35_06415;Name=PUW35_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06415 CP118132.1 Protein Homology CDS 1325186 1325662 . - 0 ID=cds-WJG94178.1;Parent=gene-PUW35_06415;Dbxref=NCBI_GP:WJG94178.1;Name=WJG94178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=PUW35_06415;product=hypothetical protein;protein_id=WJG94178.1;transl_table=11 CP118132.1 Genbank gene 1325992 1326387 . - . ID=gene-PUW35_06420;Name=PUW35_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06420 CP118132.1 Protein Homology CDS 1325992 1326387 . - 0 ID=cds-WJG94179.1;Parent=gene-PUW35_06420;Dbxref=NCBI_GP:WJG94179.1;Name=WJG94179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=PUW35_06420;product=DUF1398 domain-containing protein;protein_id=WJG94179.1;transl_table=11 CP118132.1 Genbank gene 1327071 1327793 . + . ID=gene-PUW35_06425;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=PUW35_06425 CP118132.1 Protein Homology CDS 1327071 1327793 . + 0 ID=cds-WJG94180.1;Parent=gene-PUW35_06425;Dbxref=NCBI_GP:WJG94180.1;Name=WJG94180.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=PUW35_06425;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WJG94180.1;transl_table=11 CP118132.1 Genbank gene 1328078 1328242 . + . ID=gene-PUW35_06430;Name=PUW35_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06430 CP118132.1 Protein Homology CDS 1328078 1328242 . + 0 ID=cds-WJG94181.1;Parent=gene-PUW35_06430;Dbxref=NCBI_GP:WJG94181.1;Name=WJG94181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=PUW35_06430;product=hypothetical protein;protein_id=WJG94181.1;transl_table=11 CP118132.1 Genbank gene 1328466 1329116 . + . ID=gene-PUW35_06435;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=PUW35_06435 CP118132.1 Protein Homology CDS 1328466 1329116 . + 0 ID=cds-WJG94182.1;Parent=gene-PUW35_06435;Dbxref=NCBI_GP:WJG94182.1;Name=WJG94182.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=PUW35_06435;product=protein-serine/threonine phosphatase;protein_id=WJG94182.1;transl_table=11 CP118132.1 Genbank gene 1329135 1329326 . - . ID=gene-PUW35_06440;Name=PUW35_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06440 CP118132.1 Protein Homology CDS 1329135 1329326 . - 0 ID=cds-WJG94183.1;Parent=gene-PUW35_06440;Dbxref=NCBI_GP:WJG94183.1;Name=WJG94183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=PUW35_06440;product=YebW family protein;protein_id=WJG94183.1;transl_table=11 CP118132.1 Genbank gene 1329437 1329673 . - . ID=gene-PUW35_06445;Name=PUW35_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06445 CP118132.1 Protein Homology CDS 1329437 1329673 . - 0 ID=cds-WJG95044.1;Parent=gene-PUW35_06445;Dbxref=NCBI_GP:WJG95044.1;Name=WJG95044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=PUW35_06445;product=YebV family protein;protein_id=WJG95044.1;transl_table=11 CP118132.1 Genbank gene 1329791 1331230 . - . ID=gene-PUW35_06450;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=PUW35_06450 CP118132.1 Protein Homology CDS 1329791 1331230 . - 0 ID=cds-WJG94184.1;Parent=gene-PUW35_06450;Dbxref=NCBI_GP:WJG94184.1;Name=WJG94184.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=PUW35_06450;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WJG94184.1;transl_table=11 CP118132.1 Genbank pseudogene 1331308 1333940 . - . ID=gene-PUW35_06455;Name=PUW35_06455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06455;pseudo=true CP118132.1 Protein Homology CDS 1331308 1333940 . - 0 ID=cds-PUW35_06455;Parent=gene-PUW35_06455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=PUW35_06455;product=MlaD family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1333909 1335192 . - . ID=gene-PUW35_06460;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=PUW35_06460 CP118132.1 Protein Homology CDS 1333909 1335192 . - 0 ID=cds-WJG94185.1;Parent=gene-PUW35_06460;Dbxref=NCBI_GP:WJG94185.1;Name=WJG94185.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=PUW35_06460;product=membrane integrity lipid transport subunit YebS;protein_id=WJG94185.1;transl_table=11 CP118132.1 Genbank gene 1335321 1335818 . + . ID=gene-PUW35_06465;Name=PUW35_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06465 CP118132.1 Protein Homology CDS 1335321 1335818 . + 0 ID=cds-WJG94186.1;Parent=gene-PUW35_06465;Dbxref=NCBI_GP:WJG94186.1;Name=WJG94186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=PUW35_06465;product=GAF domain-containing protein;protein_id=WJG94186.1;transl_table=11 CP118132.1 Genbank gene 1335916 1336602 . + . ID=gene-PUW35_06470;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=PUW35_06470 CP118132.1 Protein Homology CDS 1335916 1336602 . + 0 ID=cds-WJG94187.1;Parent=gene-PUW35_06470;Dbxref=NCBI_GP:WJG94187.1;Name=WJG94187.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=PUW35_06470;product=RNA chaperone ProQ;protein_id=WJG94187.1;transl_table=11 CP118132.1 Genbank pseudogene 1336622 1338669 . + . ID=gene-PUW35_06475;Name=prc;gbkey=Gene;gene=prc;gene_biotype=pseudogene;locus_tag=PUW35_06475;pseudo=true CP118132.1 Protein Homology CDS 1336622 1338669 . + 0 ID=cds-PUW35_06475;Parent=gene-PUW35_06475;Note=frameshifted;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=PUW35_06475;product=carboxy terminal-processing peptidase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1338862 1339743 . + . ID=gene-PUW35_06480;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=PUW35_06480 CP118132.1 Protein Homology CDS 1338862 1339743 . + 0 ID=cds-WJG94188.1;Parent=gene-PUW35_06480;Dbxref=NCBI_GP:WJG94188.1;Name=WJG94188.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=PUW35_06480;product=protease HtpX;protein_id=WJG94188.1;transl_table=11 CP118132.1 Genbank pseudogene 1339791 1341042 . - . ID=gene-PUW35_06485;Name=PUW35_06485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06485;pseudo=true CP118132.1 Protein Homology CDS 1339791 1341042 . - 0 ID=cds-PUW35_06485;Parent=gene-PUW35_06485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=PUW35_06485;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1341218 1342009 . + . ID=gene-PUW35_06490;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=PUW35_06490 CP118132.1 Protein Homology CDS 1341218 1342009 . + 0 ID=cds-WJG94189.1;Parent=gene-PUW35_06490;Dbxref=NCBI_GP:WJG94189.1;Name=WJG94189.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=PUW35_06490;product=DNA-binding transcriptional regulator KdgR;protein_id=WJG94189.1;transl_table=11 CP118132.1 Genbank gene 1342221 1342460 . - . ID=gene-PUW35_06495;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=PUW35_06495 CP118132.1 Protein Homology CDS 1342221 1342460 . - 0 ID=cds-WJG94190.1;Parent=gene-PUW35_06495;Dbxref=NCBI_GP:WJG94190.1;Name=WJG94190.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=PUW35_06495;product=invasion protein YobH;protein_id=WJG94190.1;transl_table=11 CP118132.1 Genbank gene 1342618 1342761 . + . ID=gene-PUW35_06500;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=PUW35_06500 CP118132.1 Protein Homology CDS 1342618 1342761 . + 0 ID=cds-WJG94191.1;Parent=gene-PUW35_06500;Dbxref=NCBI_GP:WJG94191.1;Name=WJG94191.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=PUW35_06500;product=PhoP/PhoQ regulator MgrB;protein_id=WJG94191.1;transl_table=11 CP118132.1 Genbank gene 1342832 1343119 . + . ID=gene-PUW35_06505;Name=PUW35_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06505 CP118132.1 Protein Homology CDS 1342832 1343119 . + 0 ID=cds-WJG94192.1;Parent=gene-PUW35_06505;Dbxref=NCBI_GP:WJG94192.1;Name=WJG94192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=PUW35_06505;product=YebO family protein;protein_id=WJG94192.1;transl_table=11 CP118132.1 Genbank gene 1343767 1343910 . + . ID=gene-PUW35_06510;Name=PUW35_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06510 CP118132.1 Protein Homology CDS 1343767 1343910 . + 0 ID=cds-WJG94193.1;Parent=gene-PUW35_06510;Dbxref=NCBI_GP:WJG94193.1;Name=WJG94193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=PUW35_06510;product=DUF2627 domain-containing protein;protein_id=WJG94193.1;transl_table=11 CP118132.1 Genbank gene 1343923 1344132 . + . ID=gene-PUW35_06515;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PUW35_06515 CP118132.1 Protein Homology CDS 1343923 1344132 . + 0 ID=cds-WJG94194.1;Parent=gene-PUW35_06515;Dbxref=NCBI_GP:WJG94194.1;Name=WJG94194.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=PUW35_06515;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WJG94194.1;transl_table=11 CP118132.1 Genbank gene 1344352 1346097 . + . ID=gene-PUW35_06520;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=PUW35_06520 CP118132.1 Protein Homology CDS 1344352 1346097 . + 0 ID=cds-WJG94195.1;Parent=gene-PUW35_06520;Dbxref=NCBI_GP:WJG94195.1;Name=WJG94195.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=PUW35_06520;product=peptidoglycan glycosyltransferase FtsI;protein_id=WJG94195.1;transl_table=11 CP118132.1 Genbank gene 1346163 1346972 . + . ID=gene-PUW35_06525;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=PUW35_06525 CP118132.1 Protein Homology CDS 1346163 1346972 . + 0 ID=cds-WJG94196.1;Parent=gene-PUW35_06525;Dbxref=NCBI_GP:WJG94196.1;Name=WJG94196.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=PUW35_06525;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WJG94196.1;transl_table=11 CP118132.1 Genbank gene 1346969 1347535 . - . ID=gene-PUW35_06530;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=PUW35_06530 CP118132.1 Protein Homology CDS 1346969 1347535 . - 0 ID=cds-WJG94197.1;Parent=gene-PUW35_06530;Dbxref=NCBI_GP:WJG94197.1;Name=WJG94197.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=PUW35_06530;product=manganese efflux pump MntP;protein_id=WJG94197.1;transl_table=11 CP118132.1 cmsearch riboswitch 1347647 1347748 . - . ID=id-CP118132.1:1347647..1347748;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118132.1 Genbank pseudogene 1347945 1348403 . - . ID=gene-PUW35_06535;Name=PUW35_06535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06535;pseudo=true CP118132.1 Protein Homology CDS 1347945 1348403 . - 0 ID=cds-PUW35_06535;Parent=gene-PUW35_06535;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=PUW35_06535;product=DUF986 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1348462 1349313 . - . ID=gene-PUW35_06540;Name=PUW35_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06540 CP118132.1 Protein Homology CDS 1348462 1349313 . - 0 ID=cds-WJG94198.1;Parent=gene-PUW35_06540;Dbxref=NCBI_GP:WJG94198.1;Name=WJG94198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=PUW35_06540;product=PTS mannose transporter subunit IID;protein_id=WJG94198.1;transl_table=11 CP118132.1 Genbank gene 1349326 1350126 . - . ID=gene-PUW35_06545;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=PUW35_06545 CP118132.1 Protein Homology CDS 1349326 1350126 . - 0 ID=cds-WJG94199.1;Parent=gene-PUW35_06545;Dbxref=NCBI_GP:WJG94199.1;Name=WJG94199.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=PUW35_06545;product=PTS mannose transporter subunit IIC;protein_id=WJG94199.1;transl_table=11 CP118132.1 Genbank gene 1350179 1351147 . - . ID=gene-PUW35_06550;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=PUW35_06550 CP118132.1 Protein Homology CDS 1350179 1351147 . - 0 ID=cds-WJG94200.1;Parent=gene-PUW35_06550;Dbxref=NCBI_GP:WJG94200.1;Name=WJG94200.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=PUW35_06550;product=PTS mannose transporter subunit IIAB;protein_id=WJG94200.1;transl_table=11 CP118132.1 Genbank gene 1351620 1353179 . + . ID=gene-PUW35_06555;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=PUW35_06555 CP118132.1 Protein Homology CDS 1351620 1353179 . + 0 ID=cds-WJG94201.1;Parent=gene-PUW35_06555;Dbxref=NCBI_GP:WJG94201.1;Name=WJG94201.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=PUW35_06555;product=CNNM family cation transport protein YoaE;protein_id=WJG94201.1;transl_table=11 CP118132.1 Genbank gene 1353201 1354802 . - . ID=gene-PUW35_06560;Name=PUW35_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06560 CP118132.1 Protein Homology CDS 1353201 1354802 . - 0 ID=cds-WJG94202.1;Parent=gene-PUW35_06560;Dbxref=NCBI_GP:WJG94202.1;Name=WJG94202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=PUW35_06560;product=cyclic diguanylate phosphodiesterase;protein_id=WJG94202.1;transl_table=11 CP118132.1 Genbank gene 1354940 1356304 . - . ID=gene-PUW35_06565;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=PUW35_06565 CP118132.1 Protein Homology CDS 1354940 1356304 . - 0 ID=cds-WJG94203.1;Parent=gene-PUW35_06565;Dbxref=NCBI_GP:WJG94203.1;Name=WJG94203.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=PUW35_06565;product=L-serine ammonia-lyase;protein_id=WJG94203.1;transl_table=11 CP118132.1 Genbank gene 1356568 1357146 . - . ID=gene-PUW35_06570;Name=PUW35_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06570 CP118132.1 Protein Homology CDS 1356568 1357146 . - 0 ID=cds-WJG94204.1;Parent=gene-PUW35_06570;Dbxref=NCBI_GP:WJG94204.1;Name=WJG94204.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=PUW35_06570;product=CoA pyrophosphatase;protein_id=WJG94204.1;transl_table=11 CP118132.1 Genbank pseudogene 1357150 1358513 . - . ID=gene-PUW35_06575;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=pseudogene;locus_tag=PUW35_06575;pseudo=true CP118132.1 Protein Homology CDS 1357150 1358513 . - 0 ID=cds-PUW35_06575;Parent=gene-PUW35_06575;Note=frameshifted;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=PUW35_06575;product=aminodeoxychorismate synthase component 1;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1358594 1358773 . + . ID=gene-PUW35_06580;Name=PUW35_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06580 CP118132.1 Protein Homology CDS 1358594 1358773 . + 0 ID=cds-WJG94205.1;Parent=gene-PUW35_06580;Dbxref=NCBI_GP:WJG94205.1;Name=WJG94205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=PUW35_06580;product=YoaH family protein;protein_id=WJG94205.1;transl_table=11 CP118132.1 Genbank gene 1358779 1359123 . - . ID=gene-PUW35_06585;Name=PUW35_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06585 CP118132.1 Protein Homology CDS 1358779 1359123 . - 0 ID=cds-WJG94206.1;Parent=gene-PUW35_06585;Dbxref=NCBI_GP:WJG94206.1;Name=WJG94206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=PUW35_06585;product=RidA family protein;protein_id=WJG94206.1;transl_table=11 CP118132.1 Genbank pseudogene 1359254 1361163 . + . ID=gene-PUW35_06590;Name=PUW35_06590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06590;pseudo=true CP118132.1 Protein Homology CDS 1359254 1361163 . + 0 ID=cds-PUW35_06590;Parent=gene-PUW35_06590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=PUW35_06590;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1361221 1361916 . + . ID=gene-PUW35_06595;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=PUW35_06595 CP118132.1 Protein Homology CDS 1361221 1361916 . + 0 ID=cds-WJG94207.1;Parent=gene-PUW35_06595;Dbxref=NCBI_GP:WJG94207.1;Name=WJG94207.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=PUW35_06595;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WJG94207.1;transl_table=11 CP118132.1 Genbank gene 1361988 1362569 . + . ID=gene-PUW35_06600;Name=PUW35_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06600 CP118132.1 Protein Homology CDS 1361988 1362569 . + 0 ID=cds-WJG94208.1;Parent=gene-PUW35_06600;Dbxref=NCBI_GP:WJG94208.1;Name=WJG94208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=PUW35_06600;product=Slp family lipoprotein;protein_id=WJG94208.1;transl_table=11 CP118132.1 Genbank gene 1362774 1364459 . + . ID=gene-PUW35_06605;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=PUW35_06605 CP118132.1 Protein Homology CDS 1362774 1364459 . + 0 ID=cds-WJG94209.1;Parent=gene-PUW35_06605;Dbxref=NCBI_GP:WJG94209.1;Name=WJG94209.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=PUW35_06605;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WJG94209.1;transl_table=11 CP118132.1 Genbank gene 1364532 1365659 . + . ID=gene-PUW35_06610;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=PUW35_06610 CP118132.1 Protein Homology CDS 1364532 1365659 . + 0 ID=cds-WJG94210.1;Parent=gene-PUW35_06610;Dbxref=NCBI_GP:WJG94210.1;Name=WJG94210.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=PUW35_06610;product=ribonuclease D;protein_id=WJG94210.1;transl_table=11 CP118132.1 Genbank gene 1365781 1366047 . - . ID=gene-PUW35_06615;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=PUW35_06615 CP118132.1 Protein Homology CDS 1365781 1366047 . - 0 ID=cds-WJG94211.1;Parent=gene-PUW35_06615;Dbxref=NCBI_GP:WJG94211.1;Name=WJG94211.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=PUW35_06615;product=cell division topological specificity factor MinE;protein_id=WJG94211.1;transl_table=11 CP118132.1 Genbank gene 1366051 1366863 . - . ID=gene-PUW35_06620;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=PUW35_06620 CP118132.1 Protein Homology CDS 1366051 1366863 . - 0 ID=cds-WJG94212.1;Parent=gene-PUW35_06620;Dbxref=NCBI_GP:WJG94212.1;Name=WJG94212.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=PUW35_06620;product=septum site-determining protein MinD;protein_id=WJG94212.1;transl_table=11 CP118132.1 Genbank gene 1366887 1367594 . - . ID=gene-PUW35_06625;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=PUW35_06625 CP118132.1 Protein Homology CDS 1366887 1367594 . - 0 ID=cds-WJG94213.1;Parent=gene-PUW35_06625;Dbxref=NCBI_GP:WJG94213.1;Name=WJG94213.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=PUW35_06625;product=septum site-determining protein MinC;protein_id=WJG94213.1;transl_table=11 CP118132.1 Genbank gene 1367720 1368013 . + . ID=gene-PUW35_06630;Name=PUW35_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06630 CP118132.1 Protein Homology CDS 1367720 1368013 . + 0 ID=cds-WJG94214.1;Parent=gene-PUW35_06630;Dbxref=NCBI_GP:WJG94214.1;Name=WJG94214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667868.1;locus_tag=PUW35_06630;product=YcgL domain-containing protein;protein_id=WJG94214.1;transl_table=11 CP118132.1 Genbank gene 1368063 1368722 . + . ID=gene-PUW35_06635;Name=PUW35_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06635 CP118132.1 Protein Homology CDS 1368063 1368722 . + 0 ID=cds-WJG94215.1;Parent=gene-PUW35_06635;Dbxref=NCBI_GP:WJG94215.1;Name=WJG94215.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=PUW35_06635;product=fumarylacetoacetate hydrolase family protein;protein_id=WJG94215.1;transl_table=11 CP118132.1 Genbank gene 1368815 1369261 . + . ID=gene-PUW35_06640;Name=PUW35_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06640 CP118132.1 Protein Homology CDS 1368815 1369261 . + 0 ID=cds-WJG94216.1;Parent=gene-PUW35_06640;Dbxref=NCBI_GP:WJG94216.1;Name=WJG94216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=PUW35_06640;product=YcgN family cysteine cluster protein;protein_id=WJG94216.1;transl_table=11 CP118132.1 Genbank gene 1369613 1369750 . + . ID=gene-PUW35_06645;Name=PUW35_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06645 CP118132.1 Protein Homology CDS 1369613 1369750 . + 0 ID=cds-WJG94217.1;Parent=gene-PUW35_06645;Dbxref=NCBI_GP:WJG94217.1;Name=WJG94217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=PUW35_06645;product=hypothetical protein;protein_id=WJG94217.1;transl_table=11 CP118132.1 Genbank gene 1369942 1370115 . + . ID=gene-PUW35_06650;Name=PUW35_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06650 CP118132.1 Protein Homology CDS 1369942 1370115 . + 0 ID=cds-WJG94218.1;Parent=gene-PUW35_06650;Dbxref=NCBI_GP:WJG94218.1;Name=WJG94218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=PUW35_06650;product=addiction module toxin%2C GnsA/GnsB family;protein_id=WJG94218.1;transl_table=11 CP118132.1 Genbank gene 1370187 1370528 . - . ID=gene-PUW35_06655;Name=PUW35_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06655 CP118132.1 Protein Homology CDS 1370187 1370528 . - 0 ID=cds-WJG94219.1;Parent=gene-PUW35_06655;Dbxref=NCBI_GP:WJG94219.1;Name=WJG94219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=PUW35_06655;product=DUF1971 domain-containing protein;protein_id=WJG94219.1;transl_table=11 CP118132.1 Genbank gene 1370637 1371167 . - . ID=gene-PUW35_06660;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=PUW35_06660 CP118132.1 Protein Homology CDS 1370637 1371167 . - 0 ID=cds-WJG94220.1;Parent=gene-PUW35_06660;Dbxref=NCBI_GP:WJG94220.1;Name=WJG94220.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=PUW35_06660;product=disulfide bond formation protein DsbB;protein_id=WJG94220.1;transl_table=11 CP118132.1 Genbank gene 1371309 1372853 . - . ID=gene-PUW35_06665;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=PUW35_06665 CP118132.1 Protein Homology CDS 1371309 1372853 . - 0 ID=cds-WJG94221.1;Parent=gene-PUW35_06665;Dbxref=NCBI_GP:WJG94221.1;Name=WJG94221.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaB;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=PUW35_06665;product=Na(+)/H(+) antiporter NhaB;protein_id=WJG94221.1;transl_table=11 CP118132.1 Genbank gene 1373073 1373792 . + . ID=gene-PUW35_06670;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=PUW35_06670 CP118132.1 Protein Homology CDS 1373073 1373792 . + 0 ID=cds-WJG94222.1;Parent=gene-PUW35_06670;Dbxref=NCBI_GP:WJG94222.1;Name=WJG94222.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=PUW35_06670;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WJG94222.1;transl_table=11 CP118132.1 Genbank gene 1373839 1375371 . - . ID=gene-PUW35_06675;Name=PUW35_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06675 CP118132.1 Protein Homology CDS 1373839 1375371 . - 0 ID=cds-WJG94223.1;Parent=gene-PUW35_06675;Dbxref=NCBI_GP:WJG94223.1;Name=WJG94223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=PUW35_06675;product=SpoVR family protein;protein_id=WJG94223.1;transl_table=11 CP118132.1 Genbank pseudogene 1375694 1376990 . + . ID=gene-PUW35_06680;Name=PUW35_06680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06680;pseudo=true CP118132.1 Protein Homology CDS 1375694 1376990 . + 0 ID=cds-PUW35_06680;Parent=gene-PUW35_06680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=PUW35_06680;product=D-amino acid dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1377004 1378074 . + . ID=gene-PUW35_06685;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=PUW35_06685 CP118132.1 Protein Homology CDS 1377004 1378074 . + 0 ID=cds-WJG94224.1;Parent=gene-PUW35_06685;Dbxref=NCBI_GP:WJG94224.1;Name=WJG94224.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=PUW35_06685;product=catabolic alanine racemase DadX;protein_id=WJG94224.1;transl_table=11 CP118132.1 Genbank gene 1378137 1379870 . - . ID=gene-PUW35_06690;Name=PUW35_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06690 CP118132.1 Protein Homology CDS 1378137 1379870 . - 0 ID=cds-WJG94225.1;Parent=gene-PUW35_06690;Dbxref=NCBI_GP:WJG94225.1;Name=WJG94225.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=PUW35_06690;product=potassium/proton antiporter;protein_id=WJG94225.1;transl_table=11 CP118132.1 Genbank gene 1379967 1380881 . - . ID=gene-PUW35_06695;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=PUW35_06695 CP118132.1 Protein Homology CDS 1379967 1380881 . - 0 ID=cds-WJG94226.1;Parent=gene-PUW35_06695;Dbxref=NCBI_GP:WJG94226.1;Name=WJG94226.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=PUW35_06695;product=muramoyltetrapeptide carboxypeptidase;protein_id=WJG94226.1;transl_table=11 CP118132.1 Genbank pseudogene 1381052 1381662 . + . ID=gene-PUW35_06700;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=pseudogene;locus_tag=PUW35_06700;pseudo=true CP118132.1 Protein Homology CDS 1381052 1381662 . + 0 ID=cds-PUW35_06700;Parent=gene-PUW35_06700;Note=frameshifted;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=PUW35_06700;product=membrane-bound lytic murein transglycosylase EmtA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1381676 1382410 . - . ID=gene-PUW35_06705;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=PUW35_06705 CP118132.1 Protein Homology CDS 1381676 1382410 . - 0 ID=cds-WJG94227.1;Parent=gene-PUW35_06705;Dbxref=NCBI_GP:WJG94227.1;Name=WJG94227.1;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=PUW35_06705;product=flagellar brake protein YcgR;protein_id=WJG94227.1;transl_table=11 CP118132.1 Genbank gene 1382579 1382833 . + . ID=gene-PUW35_06710;Name=PUW35_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06710 CP118132.1 Protein Homology CDS 1382579 1382833 . + 0 ID=cds-WJG94228.1;Parent=gene-PUW35_06710;Dbxref=NCBI_GP:WJG94228.1;Name=WJG94228.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=PUW35_06710;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WJG94228.1;transl_table=11 CP118132.1 Genbank gene 1382896 1384608 . - . ID=gene-PUW35_06715;Name=PUW35_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06715 CP118132.1 Protein Homology CDS 1382896 1384608 . - 0 ID=cds-WJG95045.1;Parent=gene-PUW35_06715;Dbxref=NCBI_GP:WJG95045.1;Name=WJG95045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=PUW35_06715;product=alpha%2Calpha-trehalase;protein_id=WJG95045.1;transl_table=11 CP118132.1 Genbank gene 1384822 1386096 . - . ID=gene-PUW35_06720;Name=PUW35_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06720 CP118132.1 Protein Homology CDS 1384822 1386096 . - 0 ID=cds-WJG94229.1;Parent=gene-PUW35_06720;Dbxref=NCBI_GP:WJG94229.1;Name=WJG94229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=PUW35_06720;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WJG94229.1;transl_table=11 CP118132.1 Genbank gene 1386491 1386580 . - . ID=gene-PUW35_06725;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=PUW35_06725 CP118132.1 Protein Homology CDS 1386491 1386580 . - 0 ID=cds-WJG94230.1;Parent=gene-PUW35_06725;Dbxref=NCBI_GP:WJG94230.1;Name=WJG94230.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=PUW35_06725;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WJG94230.1;transl_table=11 CP118132.1 Genbank pseudogene 1386593 1387728 . - . ID=gene-PUW35_06730;Name=appB;gbkey=Gene;gene=appB;gene_biotype=pseudogene;locus_tag=PUW35_06730;pseudo=true CP118132.1 Protein Homology CDS 1386593 1387728 . - 0 ID=cds-PUW35_06730;Parent=gene-PUW35_06730;Note=frameshifted;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=PUW35_06730;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1387740 1389284 . - . ID=gene-PUW35_06735;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=PUW35_06735 CP118132.1 Protein Homology CDS 1387740 1389284 . - 0 ID=cds-WJG94231.1;Parent=gene-PUW35_06735;Dbxref=NCBI_GP:WJG94231.1;Name=WJG94231.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=PUW35_06735;product=cytochrome bd-II oxidase subunit 1;protein_id=WJG94231.1;transl_table=11 CP118132.1 Genbank pseudogene 1389359 1390207 . - . ID=gene-PUW35_06740;Name=PUW35_06740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06740;pseudo=true CP118132.1 Protein Homology CDS 1389359 1390207 . - 0 ID=cds-PUW35_06740;Parent=gene-PUW35_06740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=PUW35_06740;product=hydrogenase expression/formation protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1390204 1390608 . - . ID=gene-PUW35_06745;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=PUW35_06745 CP118132.1 Protein Homology CDS 1390204 1390608 . - 0 ID=cds-WJG94232.1;Parent=gene-PUW35_06745;Dbxref=NCBI_GP:WJG94232.1;Name=WJG94232.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=PUW35_06745;product=hydrogenase-1 operon protein HyaE;protein_id=WJG94232.1;transl_table=11 CP118132.1 Genbank gene 1390598 1391194 . - . ID=gene-PUW35_06750;Name=PUW35_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06750 CP118132.1 Protein Homology CDS 1390598 1391194 . - 0 ID=cds-WJG94233.1;Parent=gene-PUW35_06750;Dbxref=NCBI_GP:WJG94233.1;Name=WJG94233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=PUW35_06750;product=hydrogenase 1 maturation protease;protein_id=WJG94233.1;transl_table=11 CP118132.1 Genbank pseudogene 1391191 1391921 . - . ID=gene-PUW35_06755;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=pseudogene;locus_tag=PUW35_06755;pseudo=true CP118132.1 Protein Homology CDS 1391191 1391921 . - 0 ID=cds-PUW35_06755;Parent=gene-PUW35_06755;Note=frameshifted;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=PUW35_06755;product=Ni/Fe-hydrogenase b-type cytochrome subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1391940 1393733 . - . ID=gene-PUW35_06760;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=PUW35_06760 CP118132.1 Protein Homology CDS 1391940 1393733 . - 0 ID=cds-WJG94234.1;Parent=gene-PUW35_06760;Dbxref=NCBI_GP:WJG94234.1;Name=WJG94234.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=PUW35_06760;product=Ni/Fe-hydrogenase large subunit;protein_id=WJG94234.1;transl_table=11 CP118132.1 Genbank gene 1393730 1394848 . - . ID=gene-PUW35_06765;Name=PUW35_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06765 CP118132.1 Protein Homology CDS 1393730 1394848 . - 0 ID=cds-WJG94235.1;Parent=gene-PUW35_06765;Dbxref=NCBI_GP:WJG94235.1;Name=WJG94235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=PUW35_06765;product=hydrogenase 1 small subunit;protein_id=WJG94235.1;transl_table=11 CP118132.1 Genbank gene 1395763 1396215 . - . ID=gene-PUW35_06770;Name=PUW35_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06770 CP118132.1 Protein Homology CDS 1395763 1396215 . - 0 ID=cds-WJG94236.1;Parent=gene-PUW35_06770;Dbxref=NCBI_GP:WJG94236.1;Name=WJG94236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=PUW35_06770;product=hypothetical protein;protein_id=WJG94236.1;transl_table=11 CP118132.1 Genbank gene 1396254 1396874 . - . ID=gene-PUW35_06775;Name=PUW35_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06775 CP118132.1 Protein Homology CDS 1396254 1396874 . - 0 ID=cds-WJG94237.1;Parent=gene-PUW35_06775;Dbxref=NCBI_GP:WJG94237.1;Name=WJG94237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=PUW35_06775;product=hypothetical protein;protein_id=WJG94237.1;transl_table=11 CP118132.1 Genbank gene 1397633 1398724 . - . ID=gene-PUW35_06780;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=PUW35_06780 CP118132.1 Protein Homology CDS 1397633 1398724 . - 0 ID=cds-WJG94238.1;Parent=gene-PUW35_06780;Dbxref=NCBI_GP:WJG94238.1;Name=WJG94238.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=PUW35_06780;product=redox-regulated ATPase YchF;protein_id=WJG94238.1;transl_table=11 CP118132.1 Genbank gene 1398841 1399425 . - . ID=gene-PUW35_06785;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=PUW35_06785 CP118132.1 Protein Homology CDS 1398841 1399425 . - 0 ID=cds-WJG94239.1;Parent=gene-PUW35_06785;Dbxref=NCBI_GP:WJG94239.1;Name=WJG94239.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=PUW35_06785;product=aminoacyl-tRNA hydrolase;protein_id=WJG94239.1;transl_table=11 CP118132.1 Genbank gene 1399701 1399979 . + . ID=gene-PUW35_06790;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=PUW35_06790 CP118132.1 Protein Homology CDS 1399701 1399979 . + 0 ID=cds-WJG94240.1;Parent=gene-PUW35_06790;Dbxref=NCBI_GP:WJG94240.1;Name=WJG94240.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=PUW35_06790;product=stress-induced protein YchH;protein_id=WJG94240.1;transl_table=11 CP118132.1 Genbank gene 1400024 1401709 . - . ID=gene-PUW35_06795;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=PUW35_06795 CP118132.1 Protein Homology CDS 1400024 1401709 . - 0 ID=cds-WJG94241.1;Parent=gene-PUW35_06795;Dbxref=NCBI_GP:WJG94241.1;Name=WJG94241.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=PUW35_06795;product=C4-dicarboxylic acid transporter DauA;protein_id=WJG94241.1;transl_table=11 CP118132.1 Genbank gene 1401834 1402781 . - . ID=gene-PUW35_06800;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=PUW35_06800 CP118132.1 Protein Homology CDS 1401834 1402781 . - 0 ID=cds-WJG94242.1;Parent=gene-PUW35_06800;Dbxref=NCBI_GP:WJG94242.1;Name=WJG94242.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=PUW35_06800;product=ribose-phosphate diphosphokinase;protein_id=WJG94242.1;transl_table=11 CP118132.1 Genbank gene 1403047 1403898 . - . ID=gene-PUW35_06805;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=PUW35_06805 CP118132.1 Protein Homology CDS 1403047 1403898 . - 0 ID=cds-WJG94243.1;Parent=gene-PUW35_06805;Dbxref=NCBI_GP:WJG94243.1;Name=WJG94243.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=PUW35_06805;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WJG94243.1;transl_table=11 CP118132.1 Genbank gene 1403895 1404518 . - . ID=gene-PUW35_06810;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=PUW35_06810 CP118132.1 Protein Homology CDS 1403895 1404518 . - 0 ID=cds-WJG94244.1;Parent=gene-PUW35_06810;Dbxref=NCBI_GP:WJG94244.1;Name=WJG94244.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=PUW35_06810;product=lipoprotein insertase outer membrane protein LolB;protein_id=WJG94244.1;transl_table=11 CP118132.1 Genbank gene 1404832 1406088 . + . ID=gene-PUW35_06815;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=PUW35_06815 CP118132.1 Protein Homology CDS 1404832 1406088 . + 0 ID=cds-WJG94245.1;Parent=gene-PUW35_06815;Dbxref=NCBI_GP:WJG94245.1;Name=WJG94245.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=PUW35_06815;product=glutamyl-tRNA reductase;protein_id=WJG94245.1;transl_table=11 CP118132.1 Genbank gene 1406129 1407211 . + . ID=gene-PUW35_06820;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=PUW35_06820 CP118132.1 Protein Homology CDS 1406129 1407211 . + 0 ID=cds-WJG94246.1;Parent=gene-PUW35_06820;Dbxref=NCBI_GP:WJG94246.1;Name=WJG94246.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=PUW35_06820;product=peptide chain release factor 1;protein_id=WJG94246.1;transl_table=11 CP118132.1 Genbank gene 1407211 1408044 . + . ID=gene-PUW35_06825;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=PUW35_06825 CP118132.1 Protein Homology CDS 1407211 1408044 . + 0 ID=cds-WJG94247.1;Parent=gene-PUW35_06825;Dbxref=NCBI_GP:WJG94247.1;Name=WJG94247.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=PUW35_06825;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WJG94247.1;transl_table=11 CP118132.1 Genbank gene 1408041 1408430 . + . ID=gene-PUW35_06830;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=PUW35_06830 CP118132.1 Protein Homology CDS 1408041 1408430 . + 0 ID=cds-WJG94248.1;Parent=gene-PUW35_06830;Dbxref=NCBI_GP:WJG94248.1;Name=WJG94248.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=PUW35_06830;product=invasion regulator SirB2;protein_id=WJG94248.1;transl_table=11 CP118132.1 Genbank gene 1408434 1409243 . + . ID=gene-PUW35_06835;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=PUW35_06835 CP118132.1 Protein Homology CDS 1408434 1409243 . + 0 ID=cds-WJG94249.1;Parent=gene-PUW35_06835;Dbxref=NCBI_GP:WJG94249.1;Name=WJG94249.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=PUW35_06835;product=invasion regulator SirB1;protein_id=WJG94249.1;transl_table=11 CP118132.1 Genbank pseudogene 1409281 1410134 . + . ID=gene-PUW35_06840;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=pseudogene;locus_tag=PUW35_06840;pseudo=true CP118132.1 Protein Homology CDS 1409281 1410134 . + 0 ID=cds-PUW35_06840;Parent=gene-PUW35_06840;Note=frameshifted;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=PUW35_06840;product=3-deoxy-8-phosphooctulonate synthase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1410188 1411288 . - . ID=gene-PUW35_06845;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=PUW35_06845 CP118132.1 Protein Homology CDS 1410188 1411288 . - 0 ID=cds-WJG94250.1;Parent=gene-PUW35_06845;Dbxref=NCBI_GP:WJG94250.1;Name=WJG94250.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=PUW35_06845;product=sodium-potassium/proton antiporter ChaA;protein_id=WJG94250.1;transl_table=11 CP118132.1 Genbank gene 1411555 1411785 . + . ID=gene-PUW35_06850;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=PUW35_06850 CP118132.1 Protein Homology CDS 1411555 1411785 . + 0 ID=cds-WJG94251.1;Parent=gene-PUW35_06850;Dbxref=NCBI_GP:WJG94251.1;Name=WJG94251.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=PUW35_06850;product=putative cation transport regulator ChaB;protein_id=WJG94251.1;transl_table=11 CP118132.1 Genbank gene 1411865 1412218 . - . ID=gene-PUW35_06855;Name=PUW35_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06855 CP118132.1 Protein Homology CDS 1411865 1412218 . - 0 ID=cds-WJG94252.1;Parent=gene-PUW35_06855;Dbxref=NCBI_GP:WJG94252.1;Name=WJG94252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=PUW35_06855;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WJG94252.1;transl_table=11 CP118132.1 Genbank gene 1412395 1413819 . + . ID=gene-PUW35_06860;Name=PUW35_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06860 CP118132.1 Protein Homology CDS 1412395 1413819 . + 0 ID=cds-WJG94253.1;Parent=gene-PUW35_06860;Dbxref=NCBI_GP:WJG94253.1;Name=WJG94253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=PUW35_06860;product=YchO/YchP family invasin;protein_id=WJG94253.1;transl_table=11 CP118132.1 Genbank gene 1413820 1414470 . - . ID=gene-PUW35_06865;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=PUW35_06865 CP118132.1 Protein Homology CDS 1413820 1414470 . - 0 ID=cds-WJG94254.1;Parent=gene-PUW35_06865;Dbxref=NCBI_GP:WJG94254.1;Name=WJG94254.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=PUW35_06865;product=two-component system response regulator NarL;protein_id=WJG94254.1;transl_table=11 CP118132.1 Genbank gene 1414463 1416259 . - . ID=gene-PUW35_06870;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=PUW35_06870 CP118132.1 Protein Homology CDS 1414463 1416259 . - 0 ID=cds-WJG94255.1;Parent=gene-PUW35_06870;Dbxref=NCBI_GP:WJG94255.1;Name=WJG94255.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=PUW35_06870;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WJG94255.1;transl_table=11 CP118132.1 Genbank gene 1416600 1417997 . + . ID=gene-PUW35_06875;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=PUW35_06875 CP118132.1 Protein Homology CDS 1416600 1417997 . + 0 ID=cds-WJG94256.1;Parent=gene-PUW35_06875;Dbxref=NCBI_GP:WJG94256.1;Name=WJG94256.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=PUW35_06875;product=nitrate transporter NarK;protein_id=WJG94256.1;transl_table=11 CP118132.1 Genbank gene 1418384 1422127 . + . ID=gene-PUW35_06880;Name=PUW35_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06880 CP118132.1 Protein Homology CDS 1418384 1422127 . + 0 ID=cds-WJG94257.1;Parent=gene-PUW35_06880;Dbxref=NCBI_GP:WJG94257.1;Name=WJG94257.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=PUW35_06880;product=nitrate reductase subunit alpha;protein_id=WJG94257.1;transl_table=11 CP118132.1 Genbank gene 1422124 1423662 . + . ID=gene-PUW35_06885;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PUW35_06885 CP118132.1 Protein Homology CDS 1422124 1423662 . + 0 ID=cds-WJG94258.1;Parent=gene-PUW35_06885;Dbxref=NCBI_GP:WJG94258.1;Name=WJG94258.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=PUW35_06885;product=nitrate reductase subunit beta;protein_id=WJG94258.1;transl_table=11 CP118132.1 Genbank gene 1423659 1424369 . + . ID=gene-PUW35_06890;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=PUW35_06890 CP118132.1 Protein Homology CDS 1423659 1424369 . + 0 ID=cds-WJG94259.1;Parent=gene-PUW35_06890;Dbxref=NCBI_GP:WJG94259.1;Name=WJG94259.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=PUW35_06890;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WJG94259.1;transl_table=11 CP118132.1 Genbank gene 1424369 1425046 . + . ID=gene-PUW35_06895;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PUW35_06895 CP118132.1 Protein Homology CDS 1424369 1425046 . + 0 ID=cds-WJG94260.1;Parent=gene-PUW35_06895;Dbxref=NCBI_GP:WJG94260.1;Name=WJG94260.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=PUW35_06895;product=respiratory nitrate reductase subunit gamma;protein_id=WJG94260.1;transl_table=11 CP118132.1 Genbank pseudogene 1425288 1426815 . + . ID=gene-PUW35_06900;Name=PUW35_06900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_06900;pseudo=true CP118132.1 Protein Homology CDS 1425288 1426815 . + 0 ID=cds-PUW35_06900;Parent=gene-PUW35_06900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=PUW35_06900;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1426918 1427049 . - . ID=gene-PUW35_06905;Name=PUW35_06905;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW35_06905 CP118132.1 cmsearch ncRNA 1426918 1427049 . - . ID=rna-PUW35_06905;Parent=gene-PUW35_06905;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06905;product=RtT sRNA CP118132.1 cmsearch exon 1426918 1427049 . - . ID=exon-PUW35_06905-1;Parent=rna-PUW35_06905;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06905;product=RtT sRNA CP118132.1 Genbank gene 1427093 1427223 . - . ID=gene-PUW35_06910;Name=PUW35_06910;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW35_06910 CP118132.1 cmsearch ncRNA 1427093 1427223 . - . ID=rna-PUW35_06910;Parent=gene-PUW35_06910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06910;product=RtT sRNA CP118132.1 cmsearch exon 1427093 1427223 . - . ID=exon-PUW35_06910-1;Parent=rna-PUW35_06910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06910;product=RtT sRNA CP118132.1 Genbank gene 1427267 1427398 . - . ID=gene-PUW35_06915;Name=PUW35_06915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW35_06915 CP118132.1 cmsearch ncRNA 1427267 1427398 . - . ID=rna-PUW35_06915;Parent=gene-PUW35_06915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06915;product=RtT sRNA CP118132.1 cmsearch exon 1427267 1427398 . - . ID=exon-PUW35_06915-1;Parent=rna-PUW35_06915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06915;product=RtT sRNA CP118132.1 Genbank gene 1427442 1427573 . - . ID=gene-PUW35_06920;Name=PUW35_06920;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW35_06920 CP118132.1 cmsearch ncRNA 1427442 1427573 . - . ID=rna-PUW35_06920;Parent=gene-PUW35_06920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06920;product=RtT sRNA CP118132.1 cmsearch exon 1427442 1427573 . - . ID=exon-PUW35_06920-1;Parent=rna-PUW35_06920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06920;product=RtT sRNA CP118132.1 Genbank gene 1427617 1427701 . - . ID=gene-PUW35_06925;Name=PUW35_06925;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_06925 CP118132.1 tRNAscan-SE tRNA 1427617 1427701 . - . ID=rna-PUW35_06925;Parent=gene-PUW35_06925;anticodon=(pos:complement(1427665..1427667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_06925;product=tRNA-Tyr CP118132.1 tRNAscan-SE exon 1427617 1427701 . - . ID=exon-PUW35_06925-1;Parent=rna-PUW35_06925;anticodon=(pos:complement(1427665..1427667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_06925;product=tRNA-Tyr CP118132.1 Genbank gene 1427730 1427871 . - . ID=gene-PUW35_06930;Name=PUW35_06930;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW35_06930 CP118132.1 cmsearch ncRNA 1427730 1427871 . - . ID=rna-PUW35_06930;Parent=gene-PUW35_06930;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06930;product=RtT sRNA CP118132.1 cmsearch exon 1427730 1427871 . - . ID=exon-PUW35_06930-1;Parent=rna-PUW35_06930;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_06930;product=RtT sRNA CP118132.1 Genbank gene 1428042 1428884 . - . ID=gene-PUW35_06935;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=PUW35_06935 CP118132.1 Protein Homology CDS 1428042 1428884 . - 0 ID=cds-WJG94261.1;Parent=gene-PUW35_06935;Dbxref=NCBI_GP:WJG94261.1;Name=WJG94261.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=PUW35_06935;product=formyltetrahydrofolate deformylase;protein_id=WJG94261.1;transl_table=11 CP118132.1 Genbank gene 1428935 1429393 . - . ID=gene-PUW35_06940;Name=PUW35_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06940 CP118132.1 Protein Homology CDS 1428935 1429393 . - 0 ID=cds-WJG94262.1;Parent=gene-PUW35_06940;Dbxref=NCBI_GP:WJG94262.1;Name=WJG94262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=PUW35_06940;product=YchJ family protein;protein_id=WJG94262.1;transl_table=11 CP118132.1 Genbank gene 1429504 1430409 . + . ID=gene-PUW35_06945;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=PUW35_06945 CP118132.1 Protein Homology CDS 1429504 1430409 . + 0 ID=cds-WJG94263.1;Parent=gene-PUW35_06945;Dbxref=NCBI_GP:WJG94263.1;Name=WJG94263.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=PUW35_06945;product=patatin-like phospholipase RssA;protein_id=WJG94263.1;transl_table=11 CP118132.1 Genbank gene 1430500 1431513 . + . ID=gene-PUW35_06950;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=PUW35_06950 CP118132.1 Protein Homology CDS 1430500 1431513 . + 0 ID=cds-WJG94264.1;Parent=gene-PUW35_06950;Dbxref=NCBI_GP:WJG94264.1;Name=WJG94264.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=PUW35_06950;product=two-component system response regulator RssB;protein_id=WJG94264.1;transl_table=11 CP118132.1 Genbank gene 1431716 1432624 . + . ID=gene-PUW35_06955;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=PUW35_06955 CP118132.1 Protein Homology CDS 1431716 1432624 . + 0 ID=cds-WJG94265.1;Parent=gene-PUW35_06955;Dbxref=NCBI_GP:WJG94265.1;Name=WJG94265.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=PUW35_06955;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WJG94265.1;transl_table=11 CP118132.1 Genbank gene 1432755 1433168 . - . ID=gene-PUW35_06960;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=PUW35_06960 CP118132.1 Protein Homology CDS 1432755 1433168 . - 0 ID=cds-WJG94266.1;Parent=gene-PUW35_06960;Dbxref=NCBI_GP:WJG94266.1;Name=WJG94266.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=PUW35_06960;product=DNA-binding transcriptional regulator H-NS;protein_id=WJG94266.1;transl_table=11 CP118132.1 Genbank gene 1433831 1434448 . + . ID=gene-PUW35_06965;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=PUW35_06965 CP118132.1 Protein Homology CDS 1433831 1434448 . + 0 ID=cds-WJG94267.1;Parent=gene-PUW35_06965;Dbxref=NCBI_GP:WJG94267.1;Name=WJG94267.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=PUW35_06965;product=thymidine kinase;protein_id=WJG94267.1;transl_table=11 CP118132.1 Genbank pseudogene 1434645 1437322 . - . ID=gene-PUW35_06970;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=pseudogene;gene_synonym=adhC;locus_tag=PUW35_06970;pseudo=true CP118132.1 Protein Homology CDS 1434645 1437322 . - 0 ID=cds-PUW35_06970;Parent=gene-PUW35_06970;Note=frameshifted;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=PUW35_06970;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1437799 1438446 . + . ID=gene-PUW35_06975;Name=PUW35_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06975 CP118132.1 Protein Homology CDS 1437799 1438446 . + 0 ID=cds-WJG94268.1;Parent=gene-PUW35_06975;Dbxref=NCBI_GP:WJG94268.1;Name=WJG94268.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=PUW35_06975;product=YchE family NAAT transporter;protein_id=WJG94268.1;transl_table=11 CP118132.1 Genbank gene 1439200 1440831 . + . ID=gene-PUW35_06980;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=PUW35_06980 CP118132.1 Protein Homology CDS 1439200 1440831 . + 0 ID=cds-WJG94269.1;Parent=gene-PUW35_06980;Dbxref=NCBI_GP:WJG94269.1;Name=WJG94269.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=PUW35_06980;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WJG94269.1;transl_table=11 CP118132.1 Genbank gene 1440953 1441873 . + . ID=gene-PUW35_06985;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=PUW35_06985 CP118132.1 Protein Homology CDS 1440953 1441873 . + 0 ID=cds-WJG94270.1;Parent=gene-PUW35_06985;Dbxref=NCBI_GP:WJG94270.1;Name=WJG94270.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=PUW35_06985;product=oligopeptide ABC transporter permease OppB;protein_id=WJG94270.1;transl_table=11 CP118132.1 Genbank gene 1441888 1442796 . + . ID=gene-PUW35_06990;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=PUW35_06990 CP118132.1 Protein Homology CDS 1441888 1442796 . + 0 ID=cds-WJG94271.1;Parent=gene-PUW35_06990;Dbxref=NCBI_GP:WJG94271.1;Name=WJG94271.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=PUW35_06990;product=oligopeptide ABC transporter permease OppC;protein_id=WJG94271.1;transl_table=11 CP118132.1 Genbank gene 1442808 1443815 . + . ID=gene-PUW35_06995;Name=PUW35_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_06995 CP118132.1 Protein Homology CDS 1442808 1443815 . + 0 ID=cds-WJG94272.1;Parent=gene-PUW35_06995;Dbxref=NCBI_GP:WJG94272.1;Name=WJG94272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=PUW35_06995;product=ABC transporter ATP-binding protein;protein_id=WJG94272.1;transl_table=11 CP118132.1 Genbank gene 1443812 1444816 . + . ID=gene-PUW35_07000;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=PUW35_07000 CP118132.1 Protein Homology CDS 1443812 1444816 . + 0 ID=cds-WJG94273.1;Parent=gene-PUW35_07000;Dbxref=NCBI_GP:WJG94273.1;Name=WJG94273.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=PUW35_07000;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WJG94273.1;transl_table=11 CP118132.1 Genbank gene 1444864 1445700 . + . ID=gene-PUW35_07005;Name=PUW35_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07005 CP118132.1 Protein Homology CDS 1444864 1445700 . + 0 ID=cds-WJG94274.1;Parent=gene-PUW35_07005;Dbxref=NCBI_GP:WJG94274.1;Name=WJG94274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=PUW35_07005;product=ion transporter;protein_id=WJG94274.1;transl_table=11 CP118132.1 Genbank gene 1445748 1446077 . - . ID=gene-PUW35_07010;Name=PUW35_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07010 CP118132.1 Protein Homology CDS 1445748 1446077 . - 0 ID=cds-WJG95046.1;Parent=gene-PUW35_07010;Dbxref=NCBI_GP:WJG95046.1;Name=WJG95046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=PUW35_07010;product=HI1450 family dsDNA-mimic protein;protein_id=WJG95046.1;transl_table=11 CP118132.1 Genbank gene 1446111 1447571 . - . ID=gene-PUW35_07015;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=PUW35_07015 CP118132.1 Protein Homology CDS 1446111 1447571 . - 0 ID=cds-WJG94275.1;Parent=gene-PUW35_07015;Dbxref=NCBI_GP:WJG94275.1;Name=WJG94275.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=PUW35_07015;product=cardiolipin synthase;protein_id=WJG94275.1;transl_table=11 CP118132.1 Genbank gene 1447714 1447887 . + . ID=gene-PUW35_07020;Name=PUW35_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07020 CP118132.1 Protein Homology CDS 1447714 1447887 . + 0 ID=cds-WJG94276.1;Parent=gene-PUW35_07020;Dbxref=NCBI_GP:WJG94276.1;Name=WJG94276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=PUW35_07020;product=YciY family protein;protein_id=WJG94276.1;transl_table=11 CP118132.1 Genbank gene 1447931 1448227 . - . ID=gene-PUW35_07025;Name=PUW35_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07025 CP118132.1 Protein Homology CDS 1447931 1448227 . - 0 ID=cds-WJG94277.1;Parent=gene-PUW35_07025;Dbxref=NCBI_GP:WJG94277.1;Name=WJG94277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=PUW35_07025;product=YciI family protein;protein_id=WJG94277.1;transl_table=11 CP118132.1 Genbank gene 1448451 1449179 . + . ID=gene-PUW35_07030;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=PUW35_07030 CP118132.1 Protein Homology CDS 1448451 1449179 . + 0 ID=cds-WJG95047.1;Parent=gene-PUW35_07030;Dbxref=NCBI_GP:WJG95047.1;Name=WJG95047.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=PUW35_07030;product=TonB system transport protein TonB;protein_id=WJG95047.1;transl_table=11 CP118132.1 Genbank gene 1449238 1449639 . - . ID=gene-PUW35_07035;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=PUW35_07035 CP118132.1 Protein Homology CDS 1449238 1449639 . - 0 ID=cds-WJG94278.1;Parent=gene-PUW35_07035;Dbxref=NCBI_GP:WJG94278.1;Name=WJG94278.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=PUW35_07035;product=acyl-CoA thioester hydrolase YciA;protein_id=WJG94278.1;transl_table=11 CP118132.1 Genbank gene 1449800 1450339 . - . ID=gene-PUW35_07040;Name=PUW35_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07040 CP118132.1 Protein Homology CDS 1449800 1450339 . - 0 ID=cds-WJG94279.1;Parent=gene-PUW35_07040;Dbxref=NCBI_GP:WJG94279.1;Name=WJG94279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=PUW35_07040;product=septation protein A;protein_id=WJG94279.1;transl_table=11 CP118132.1 Genbank pseudogene 1450396 1451138 . - . ID=gene-PUW35_07045;Name=PUW35_07045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07045;pseudo=true CP118132.1 Protein Homology CDS 1450396 1451138 . - 0 ID=cds-PUW35_07045;Parent=gene-PUW35_07045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=PUW35_07045;product=YciC family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1451164 1451568 . - . ID=gene-PUW35_07050;Name=PUW35_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07050 CP118132.1 Protein Homology CDS 1451164 1451568 . - 0 ID=cds-WJG94280.1;Parent=gene-PUW35_07050;Dbxref=NCBI_GP:WJG94280.1;Name=WJG94280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=PUW35_07050;product=YkgJ family cysteine cluster protein;protein_id=WJG94280.1;transl_table=11 CP118132.1 Genbank gene 1451906 1452544 . + . ID=gene-PUW35_07055;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=PUW35_07055 CP118132.1 Protein Homology CDS 1451906 1452544 . + 0 ID=cds-WJG94281.1;Parent=gene-PUW35_07055;Dbxref=NCBI_GP:WJG94281.1;Name=WJG94281.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=PUW35_07055;product=outer membrane protein OmpW;protein_id=WJG94281.1;transl_table=11 CP118132.1 Genbank gene 1452626 1453504 . - . ID=gene-PUW35_07060;Name=PUW35_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07060 CP118132.1 Protein Homology CDS 1452626 1453504 . - 0 ID=cds-WJG94282.1;Parent=gene-PUW35_07060;Dbxref=NCBI_GP:WJG94282.1;Name=WJG94282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=PUW35_07060;product=manganese catalase family protein;protein_id=WJG94282.1;transl_table=11 CP118132.1 Genbank gene 1453524 1454030 . - . ID=gene-PUW35_07065;Name=PUW35_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07065 CP118132.1 Protein Homology CDS 1453524 1454030 . - 0 ID=cds-WJG94283.1;Parent=gene-PUW35_07065;Dbxref=NCBI_GP:WJG94283.1;Name=WJG94283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=PUW35_07065;product=ferritin-like domain-containing protein;protein_id=WJG94283.1;transl_table=11 CP118132.1 Genbank gene 1454104 1454607 . - . ID=gene-PUW35_07070;Name=PUW35_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07070 CP118132.1 Protein Homology CDS 1454104 1454607 . - 0 ID=cds-WJG94284.1;Parent=gene-PUW35_07070;Dbxref=NCBI_GP:WJG94284.1;Name=WJG94284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=PUW35_07070;product=ferritin-like domain-containing protein;protein_id=WJG94284.1;transl_table=11 CP118132.1 Genbank gene 1454697 1454879 . - . ID=gene-PUW35_07075;Name=PUW35_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07075 CP118132.1 Protein Homology CDS 1454697 1454879 . - 0 ID=cds-WJG94285.1;Parent=gene-PUW35_07075;Dbxref=NCBI_GP:WJG94285.1;Name=WJG94285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=PUW35_07075;product=general stress protein;protein_id=WJG94285.1;transl_table=11 CP118132.1 Genbank gene 1455359 1456165 . - . ID=gene-PUW35_07080;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=PUW35_07080 CP118132.1 Protein Homology CDS 1455359 1456165 . - 0 ID=cds-WJG94286.1;Parent=gene-PUW35_07080;Dbxref=NCBI_GP:WJG94286.1;Name=WJG94286.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=PUW35_07080;product=tryptophan synthase subunit alpha;protein_id=WJG94286.1;transl_table=11 CP118132.1 Genbank gene 1456165 1457358 . - . ID=gene-PUW35_07085;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=PUW35_07085 CP118132.1 Protein Homology CDS 1456165 1457358 . - 0 ID=cds-WJG94287.1;Parent=gene-PUW35_07085;Dbxref=NCBI_GP:WJG94287.1;Name=WJG94287.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=PUW35_07085;product=tryptophan synthase subunit beta;protein_id=WJG94287.1;transl_table=11 CP118132.1 Genbank gene 1457368 1458726 . - . ID=gene-PUW35_07090;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=PUW35_07090 CP118132.1 Protein Homology CDS 1457368 1458726 . - 0 ID=cds-WJG94288.1;Parent=gene-PUW35_07090;Dbxref=NCBI_GP:WJG94288.1;Name=WJG94288.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=PUW35_07090;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WJG94288.1;transl_table=11 CP118132.1 Genbank gene 1458730 1460325 . - . ID=gene-PUW35_07095;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=PUW35_07095 CP118132.1 Protein Homology CDS 1458730 1460325 . - 0 ID=cds-WJG94289.1;Parent=gene-PUW35_07095;Dbxref=NCBI_GP:WJG94289.1;Name=WJG94289.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=PUW35_07095;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WJG94289.1;transl_table=11 CP118132.1 Genbank gene 1460325 1461887 . - . ID=gene-PUW35_07100;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=PUW35_07100 CP118132.1 Protein Homology CDS 1460325 1461887 . - 0 ID=cds-WJG94290.1;Parent=gene-PUW35_07100;Dbxref=NCBI_GP:WJG94290.1;Name=WJG94290.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=PUW35_07100;product=anthranilate synthase component I;protein_id=WJG94290.1;transl_table=11 CP118132.1 cmsearch sequence_feature 1461910 1462005 . - . ID=id-CP118132.1:1461910..1462005;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118132.1 Genbank gene 1461982 1462026 . - . ID=gene-PUW35_07105;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=PUW35_07105 CP118132.1 Protein Homology CDS 1461982 1462026 . - 0 ID=cds-WJG95048.1;Parent=gene-PUW35_07105;Dbxref=NCBI_GP:WJG95048.1;Name=WJG95048.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=PUW35_07105;product=trp operon leader peptide;protein_id=WJG95048.1;transl_table=11 CP118132.1 Genbank gene 1462148 1463029 . + . ID=gene-PUW35_07110;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=PUW35_07110 CP118132.1 Protein Homology CDS 1462148 1463029 . + 0 ID=cds-WJG94291.1;Parent=gene-PUW35_07110;Dbxref=NCBI_GP:WJG94291.1;Name=WJG94291.1;gbkey=CDS;gene=rnm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=PUW35_07110;product=RNase AM;protein_id=WJG94291.1;transl_table=11 CP118132.1 Genbank gene 1463037 1463657 . + . ID=gene-PUW35_07115;Name=PUW35_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07115 CP118132.1 Protein Homology CDS 1463037 1463657 . + 0 ID=cds-WJG94292.1;Parent=gene-PUW35_07115;Dbxref=NCBI_GP:WJG94292.1;Name=WJG94292.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=PUW35_07115;product=L-threonylcarbamoyladenylate synthase;protein_id=WJG94292.1;transl_table=11 CP118132.1 Genbank gene 1463758 1464633 . + . ID=gene-PUW35_07120;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=PUW35_07120 CP118132.1 Protein Homology CDS 1463758 1464633 . + 0 ID=cds-WJG94293.1;Parent=gene-PUW35_07120;Dbxref=NCBI_GP:WJG94293.1;Name=WJG94293.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=PUW35_07120;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WJG94293.1;transl_table=11 CP118132.1 Genbank pseudogene 1464720 1465310 . - . ID=gene-PUW35_07125;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=pseudogene;locus_tag=PUW35_07125;pseudo=true CP118132.1 Protein Homology CDS 1464720 1465310 . - 0 ID=cds-PUW35_07125;Parent=gene-PUW35_07125;Note=internal stop;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=PUW35_07125;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1465307 1466068 . - . ID=gene-PUW35_07130;Name=PUW35_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07130 CP118132.1 Protein Homology CDS 1465307 1466068 . - 0 ID=cds-WJG94294.1;Parent=gene-PUW35_07130;Dbxref=NCBI_GP:WJG94294.1;Name=WJG94294.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=PUW35_07130;product=YciK family oxidoreductase;protein_id=WJG94294.1;transl_table=11 CP118132.1 Genbank pseudogene 1466305 1467350 . + . ID=gene-PUW35_07135;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=pseudogene;locus_tag=PUW35_07135;pseudo=true CP118132.1 Protein Homology CDS 1466305 1467350 . + 0 ID=cds-PUW35_07135;Parent=gene-PUW35_07135;Note=frameshifted;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=PUW35_07135;product=protease SohB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1467392 1467643 . - . ID=gene-PUW35_07140;Name=PUW35_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07140 CP118132.1 Protein Homology CDS 1467392 1467643 . - 0 ID=cds-WJG94295.1;Parent=gene-PUW35_07140;Dbxref=NCBI_GP:WJG94295.1;Name=WJG94295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=PUW35_07140;product=YciN family protein;protein_id=WJG94295.1;transl_table=11 CP118132.1 Genbank gene 1468046 1470643 . + . ID=gene-PUW35_07145;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=PUW35_07145 CP118132.1 Protein Homology CDS 1468046 1470643 . + 0 ID=cds-WJG94296.1;Parent=gene-PUW35_07145;Dbxref=NCBI_GP:WJG94296.1;Name=WJG94296.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=PUW35_07145;product=type I DNA topoisomerase;protein_id=WJG94296.1;transl_table=11 CP118132.1 Genbank gene 1471054 1472028 . + . ID=gene-PUW35_07150;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=PUW35_07150 CP118132.1 Protein Homology CDS 1471054 1472028 . + 0 ID=cds-WJG94297.1;Parent=gene-PUW35_07150;Dbxref=NCBI_GP:WJG94297.1;Name=WJG94297.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=PUW35_07150;product=HTH-type transcriptional regulator CysB;protein_id=WJG94297.1;transl_table=11 CP118132.1 Genbank gene 1472309 1472449 . + . ID=gene-PUW35_07155;Name=PUW35_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07155 CP118132.1 Protein Homology CDS 1472309 1472449 . + 0 ID=cds-WJG95049.1;Parent=gene-PUW35_07155;Dbxref=NCBI_GP:WJG95049.1;Name=WJG95049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=PUW35_07155;product=YmiA family putative membrane protein;protein_id=WJG95049.1;transl_table=11 CP118132.1 Genbank gene 1472450 1472620 . + . ID=gene-PUW35_07160;Name=PUW35_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07160 CP118132.1 Protein Homology CDS 1472450 1472620 . + 0 ID=cds-WJG94298.1;Parent=gene-PUW35_07160;Dbxref=NCBI_GP:WJG94298.1;Name=WJG94298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=PUW35_07160;product=hypothetical protein;protein_id=WJG94298.1;transl_table=11 CP118132.1 Genbank gene 1472730 1472822 . + . ID=gene-PUW35_07165;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=PUW35_07165 CP118132.1 Protein Homology CDS 1472730 1472822 . + 0 ID=cds-WJG94299.1;Parent=gene-PUW35_07165;Dbxref=NCBI_GP:WJG94299.1;Name=WJG94299.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096370.1;locus_tag=PUW35_07165;product=small membrane protein YmiC;protein_id=WJG94299.1;transl_table=11 CP118132.1 Genbank gene 1473005 1475680 . + . ID=gene-PUW35_07170;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=PUW35_07170 CP118132.1 Protein Homology CDS 1473005 1475680 . + 0 ID=cds-WJG94300.1;Parent=gene-PUW35_07170;Dbxref=NCBI_GP:WJG94300.1;Name=WJG94300.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=PUW35_07170;product=aconitate hydratase AcnA;protein_id=WJG94300.1;transl_table=11 CP118132.1 Genbank gene 1475736 1476326 . - . ID=gene-PUW35_07175;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=PUW35_07175 CP118132.1 Protein Homology CDS 1475736 1476326 . - 0 ID=cds-WJG94301.1;Parent=gene-PUW35_07175;Dbxref=NCBI_GP:WJG94301.1;Name=WJG94301.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=PUW35_07175;product=GTP cyclohydrolase II;protein_id=WJG94301.1;transl_table=11 CP118132.1 Genbank gene 1476522 1477286 . + . ID=gene-PUW35_07180;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=PUW35_07180 CP118132.1 Protein Homology CDS 1476522 1477286 . + 0 ID=cds-WJG94302.1;Parent=gene-PUW35_07180;Dbxref=NCBI_GP:WJG94302.1;Name=WJG94302.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=PUW35_07180;product=phosphatidylglycerophosphatase B;protein_id=WJG94302.1;transl_table=11 CP118132.1 Genbank gene 1477435 1477743 . + . ID=gene-PUW35_07185;Name=PUW35_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07185 CP118132.1 Protein Homology CDS 1477435 1477743 . + 0 ID=cds-WJG94303.1;Parent=gene-PUW35_07185;Dbxref=NCBI_GP:WJG94303.1;Name=WJG94303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=PUW35_07185;product=LapA family protein;protein_id=WJG94303.1;transl_table=11 CP118132.1 Genbank gene 1477750 1478919 . + . ID=gene-PUW35_07190;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=PUW35_07190 CP118132.1 Protein Homology CDS 1477750 1478919 . + 0 ID=cds-WJG94304.1;Parent=gene-PUW35_07190;Dbxref=NCBI_GP:WJG94304.1;Name=WJG94304.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=PUW35_07190;product=lipopolysaccharide assembly protein LapB;protein_id=WJG94304.1;transl_table=11 CP118132.1 Genbank gene 1479110 1479847 . + . ID=gene-PUW35_07195;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=PUW35_07195 CP118132.1 Protein Homology CDS 1479110 1479847 . + 0 ID=cds-WJG94305.1;Parent=gene-PUW35_07195;Dbxref=NCBI_GP:WJG94305.1;Name=WJG94305.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=PUW35_07195;product=orotidine-5'-phosphate decarboxylase;protein_id=WJG94305.1;transl_table=11 CP118132.1 Genbank gene 1479847 1480173 . + . ID=gene-PUW35_07200;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=PUW35_07200 CP118132.1 Protein Homology CDS 1479847 1480173 . + 0 ID=cds-WJG94306.1;Parent=gene-PUW35_07200;Dbxref=NCBI_GP:WJG94306.1;Name=WJG94306.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=PUW35_07200;product=stress response translation initiation inhibitor YciH;protein_id=WJG94306.1;transl_table=11 CP118132.1 Genbank gene 1480293 1480511 . - . ID=gene-PUW35_07205;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=PUW35_07205 CP118132.1 Protein Homology CDS 1480293 1480511 . - 0 ID=cds-WJG94307.1;Parent=gene-PUW35_07205;Dbxref=NCBI_GP:WJG94307.1;Name=WJG94307.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=PUW35_07205;product=osmotically-inducible lipoprotein OsmB;protein_id=WJG94307.1;transl_table=11 CP118132.1 Genbank pseudogene 1480770 1481521 . - . ID=gene-PUW35_07210;Name=PUW35_07210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07210;pseudo=true CP118132.1 Protein Homology CDS 1480770 1481521 . - 0 ID=cds-PUW35_07210;Parent=gene-PUW35_07210;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=PUW35_07210;product=DNA-binding transcriptional regulator YciT;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1481608 1481787 . - . ID=gene-PUW35_07215;Name=PUW35_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07215 CP118132.1 Protein Homology CDS 1481608 1481787 . - 0 ID=cds-WJG94308.1;Parent=gene-PUW35_07215;Dbxref=NCBI_GP:WJG94308.1;Name=WJG94308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=PUW35_07215;product=hypothetical protein;protein_id=WJG94308.1;transl_table=11 CP118132.1 Genbank gene 1481909 1483891 . - . ID=gene-PUW35_07220;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=PUW35_07220 CP118132.1 Protein Homology CDS 1481909 1483891 . - 0 ID=cds-WJG94309.1;Parent=gene-PUW35_07220;Dbxref=NCBI_GP:WJG94309.1;Name=WJG94309.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=PUW35_07220;product=cyclic di-GMP phosphodiesterase;protein_id=WJG94309.1;transl_table=11 CP118132.1 Genbank gene 1484153 1486087 . - . ID=gene-PUW35_07225;Name=PUW35_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07225 CP118132.1 Protein Homology CDS 1484153 1486087 . - 0 ID=cds-WJG94310.1;Parent=gene-PUW35_07225;Dbxref=NCBI_GP:WJG94310.1;Name=WJG94310.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=PUW35_07225;product=exoribonuclease II;protein_id=WJG94310.1;transl_table=11 CP118132.1 Genbank pseudogene 1486332 1487313 . - . ID=gene-PUW35_07230;Name=PUW35_07230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07230;pseudo=true CP118132.1 Protein Homology CDS 1486332 1487313 . - 0 ID=cds-PUW35_07230;Parent=gene-PUW35_07230;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=PUW35_07230;product=CMD domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1487513 1488301 . - . ID=gene-PUW35_07235;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=PUW35_07235 CP118132.1 Protein Homology CDS 1487513 1488301 . - 0 ID=cds-WJG94311.1;Parent=gene-PUW35_07235;Dbxref=NCBI_GP:WJG94311.1;Name=WJG94311.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=PUW35_07235;product=enoyl-ACP reductase FabI;protein_id=WJG94311.1;transl_table=11 CP118132.1 Genbank pseudogene 1488419 1488717 . - . ID=gene-PUW35_07240;Name=PUW35_07240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07240;pseudo=true CP118132.1 Protein Homology CDS 1488419 1488717 . - 0 ID=cds-PUW35_07240;Parent=gene-PUW35_07240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=PUW35_07240;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1488692 1488871 . - . ID=gene-PUW35_07245;Name=PUW35_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07245 CP118132.1 Protein Homology CDS 1488692 1488871 . - 0 ID=cds-WJG94312.1;Parent=gene-PUW35_07245;Dbxref=NCBI_GP:WJG94312.1;Name=WJG94312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=PUW35_07245;product=hypothetical protein;protein_id=WJG94312.1;transl_table=11 CP118132.1 Genbank pseudogene 1488906 1490277 . + . ID=gene-PUW35_07250;Name=steC;gbkey=Gene;gene=steC;gene_biotype=pseudogene;locus_tag=PUW35_07250;pseudo=true CP118132.1 Protein Homology CDS 1488906 1490277 . + 0 ID=cds-PUW35_07250;Parent=gene-PUW35_07250;Note=frameshifted;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=PUW35_07250;product=SPI-2 type III secretion system effector kinase SteC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1490745 1491452 . + . ID=gene-PUW35_07255;Name=PUW35_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07255 CP118132.1 Protein Homology CDS 1490745 1491452 . + 0 ID=cds-WJG94313.1;Parent=gene-PUW35_07255;Dbxref=NCBI_GP:WJG94313.1;Name=WJG94313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=PUW35_07255;product=EAL domain-containing protein;protein_id=WJG94313.1;transl_table=11 CP118132.1 Genbank gene 1491468 1492274 . - . ID=gene-PUW35_07260;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=PUW35_07260 CP118132.1 Protein Homology CDS 1491468 1492274 . - 0 ID=cds-WJG94314.1;Parent=gene-PUW35_07260;Dbxref=NCBI_GP:WJG94314.1;Name=WJG94314.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=PUW35_07260;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WJG94314.1;transl_table=11 CP118132.1 Genbank gene 1492276 1493268 . - . ID=gene-PUW35_07265;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=PUW35_07265 CP118132.1 Protein Homology CDS 1492276 1493268 . - 0 ID=cds-WJG94315.1;Parent=gene-PUW35_07265;Dbxref=NCBI_GP:WJG94315.1;Name=WJG94315.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=PUW35_07265;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WJG94315.1;transl_table=11 CP118132.1 Genbank gene 1493268 1494158 . - . ID=gene-PUW35_07270;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=PUW35_07270 CP118132.1 Protein Homology CDS 1493268 1494158 . - 0 ID=cds-WJG94316.1;Parent=gene-PUW35_07270;Dbxref=NCBI_GP:WJG94316.1;Name=WJG94316.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=PUW35_07270;product=peptide ABC transporter permease SapC;protein_id=WJG94316.1;transl_table=11 CP118132.1 Genbank pseudogene 1494145 1495109 . - . ID=gene-PUW35_07275;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=pseudogene;locus_tag=PUW35_07275;pseudo=true CP118132.1 Protein Homology CDS 1494145 1495109 . - 0 ID=cds-PUW35_07275;Parent=gene-PUW35_07275;Note=frameshifted;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=PUW35_07275;product=peptide ABC transporter permease SapB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1495106 1496755 . - . ID=gene-PUW35_07280;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=PUW35_07280 CP118132.1 Protein Homology CDS 1495106 1496755 . - 0 ID=cds-WJG94317.1;Parent=gene-PUW35_07280;Dbxref=NCBI_GP:WJG94317.1;Name=WJG94317.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=PUW35_07280;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WJG94317.1;transl_table=11 CP118132.1 Genbank pseudogene 1496867 1497846 . - . ID=gene-PUW35_07285;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=pseudogene;locus_tag=PUW35_07285;pseudo=true CP118132.1 Protein Homology CDS 1496867 1497846 . - 0 ID=cds-PUW35_07285;Parent=gene-PUW35_07285;Note=frameshifted;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=PUW35_07285;product=phage shock protein operon transcriptional activator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1498017 1498685 . + . ID=gene-PUW35_07290;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=PUW35_07290 CP118132.1 Protein Homology CDS 1498017 1498685 . + 0 ID=cds-WJG94318.1;Parent=gene-PUW35_07290;Dbxref=NCBI_GP:WJG94318.1;Name=WJG94318.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=PUW35_07290;product=phage shock protein PspA;protein_id=WJG94318.1;transl_table=11 CP118132.1 Genbank gene 1498745 1498969 . + . ID=gene-PUW35_07295;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=PUW35_07295 CP118132.1 Protein Homology CDS 1498745 1498969 . + 0 ID=cds-WJG94319.1;Parent=gene-PUW35_07295;Dbxref=NCBI_GP:WJG94319.1;Name=WJG94319.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=PUW35_07295;product=envelope stress response membrane protein PspB;protein_id=WJG94319.1;transl_table=11 CP118132.1 Genbank gene 1498969 1499328 . + . ID=gene-PUW35_07300;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=PUW35_07300 CP118132.1 Protein Homology CDS 1498969 1499328 . + 0 ID=cds-WJG94320.1;Parent=gene-PUW35_07300;Dbxref=NCBI_GP:WJG94320.1;Name=WJG94320.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=PUW35_07300;product=envelope stress response membrane protein PspC;protein_id=WJG94320.1;transl_table=11 CP118132.1 Genbank gene 1499351 1499569 . + . ID=gene-PUW35_07305;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=PUW35_07305 CP118132.1 Protein Homology CDS 1499351 1499569 . + 0 ID=cds-WJG94321.1;Parent=gene-PUW35_07305;Dbxref=NCBI_GP:WJG94321.1;Name=WJG94321.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=PUW35_07305;product=phage shock protein PspD;protein_id=WJG94321.1;transl_table=11 CP118132.1 Genbank gene 1499645 1499959 . + . ID=gene-PUW35_07310;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=PUW35_07310 CP118132.1 Protein Homology CDS 1499645 1499959 . + 0 ID=cds-WJG94322.1;Parent=gene-PUW35_07310;Dbxref=NCBI_GP:WJG94322.1;Name=WJG94322.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=PUW35_07310;product=thiosulfate sulfurtransferase PspE;protein_id=WJG94322.1;transl_table=11 CP118132.1 Genbank pseudogene 1500108 1501504 . + . ID=gene-PUW35_07315;Name=PUW35_07315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07315;pseudo=true CP118132.1 Protein Homology CDS 1500108 1501504 . + 0 ID=cds-PUW35_07315;Parent=gene-PUW35_07315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=PUW35_07315;product=YcjX family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1501501 1502562 . + . ID=gene-PUW35_07320;Name=PUW35_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07320 CP118132.1 Protein Homology CDS 1501501 1502562 . + 0 ID=cds-WJG94323.1;Parent=gene-PUW35_07320;Dbxref=NCBI_GP:WJG94323.1;Name=WJG94323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=PUW35_07320;product=YcjF family protein;protein_id=WJG94323.1;transl_table=11 CP118132.1 Genbank gene 1502710 1504251 . + . ID=gene-PUW35_07325;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=PUW35_07325 CP118132.1 Protein Homology CDS 1502710 1504251 . + 0 ID=cds-WJG94324.1;Parent=gene-PUW35_07325;Dbxref=NCBI_GP:WJG94324.1;Name=WJG94324.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=PUW35_07325;product=transcriptional regulator TyrR;protein_id=WJG94324.1;transl_table=11 CP118132.1 Genbank gene 1504341 1504847 . - . ID=gene-PUW35_07330;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=PUW35_07330 CP118132.1 Protein Homology CDS 1504341 1504847 . - 0 ID=cds-WJG94325.1;Parent=gene-PUW35_07330;Dbxref=NCBI_GP:WJG94325.1;Name=WJG94325.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=PUW35_07330;product=thiol peroxidase;protein_id=WJG94325.1;transl_table=11 CP118132.1 Genbank pseudogene 1504963 1505927 . + . ID=gene-PUW35_07335;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=pseudogene;locus_tag=PUW35_07335;pseudo=true CP118132.1 Protein Homology CDS 1504963 1505927 . + 0 ID=cds-PUW35_07335;Parent=gene-PUW35_07335;Note=frameshifted;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=PUW35_07335;product=L-Ala-D/L-Glu epimerase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1505902 1506630 . - . ID=gene-PUW35_07340;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=PUW35_07340 CP118132.1 Protein Homology CDS 1505902 1506630 . - 0 ID=cds-WJG94326.1;Parent=gene-PUW35_07340;Dbxref=NCBI_GP:WJG94326.1;Name=WJG94326.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=PUW35_07340;product=murein tripeptide amidase MpaA;protein_id=WJG94326.1;transl_table=11 CP118132.1 Genbank gene 1506820 1508433 . + . ID=gene-PUW35_07345;Name=PUW35_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07345 CP118132.1 Protein Homology CDS 1506820 1508433 . + 0 ID=cds-WJG94327.1;Parent=gene-PUW35_07345;Dbxref=NCBI_GP:WJG94327.1;Name=WJG94327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=PUW35_07345;product=peptide ABC transporter substrate-binding protein;protein_id=WJG94327.1;transl_table=11 CP118132.1 Genbank gene 1508530 1509459 . - . ID=gene-PUW35_07350;Name=PUW35_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07350 CP118132.1 Protein Homology CDS 1508530 1509459 . - 0 ID=cds-WJG94328.1;Parent=gene-PUW35_07350;Dbxref=NCBI_GP:WJG94328.1;Name=WJG94328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=PUW35_07350;product=aromatic alcohol reductase;protein_id=WJG94328.1;transl_table=11 CP118132.1 Genbank gene 1509578 1510483 . + . ID=gene-PUW35_07355;Name=PUW35_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07355 CP118132.1 Protein Homology CDS 1509578 1510483 . + 0 ID=cds-WJG94329.1;Parent=gene-PUW35_07355;Dbxref=NCBI_GP:WJG94329.1;Name=WJG94329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=PUW35_07355;product=LysR family transcriptional regulator;protein_id=WJG94329.1;transl_table=11 CP118132.1 Genbank pseudogene 1510759 1511627 . + . ID=gene-PUW35_07360;Name=PUW35_07360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07360;pseudo=true CP118132.1 Protein Homology CDS 1510759 1511627 . + 0 ID=cds-PUW35_07360;Parent=gene-PUW35_07360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=PUW35_07360;product=aldo/keto reductase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1511718 1512430 . - . ID=gene-PUW35_07365;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=pseudogene;locus_tag=PUW35_07365;pseudo=true CP118132.1 Protein Homology CDS 1511718 1512430 . - 0 ID=cds-PUW35_07365;Parent=gene-PUW35_07365;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=PUW35_07365;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1512508 1513098 . + . ID=gene-PUW35_07370;Name=PUW35_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07370 CP118132.1 Protein Homology CDS 1512508 1513098 . + 0 ID=cds-WJG94330.1;Parent=gene-PUW35_07370;Dbxref=NCBI_GP:WJG94330.1;Name=WJG94330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=PUW35_07370;product=TetR/AcrR family transcriptional regulator;protein_id=WJG94330.1;transl_table=11 CP118132.1 Genbank gene 1513227 1513463 . + . ID=gene-PUW35_07375;Name=PUW35_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07375 CP118132.1 Protein Homology CDS 1513227 1513463 . + 0 ID=cds-WJG94331.1;Parent=gene-PUW35_07375;Dbxref=NCBI_GP:WJG94331.1;Name=WJG94331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=PUW35_07375;product=YgdI/YgdR family lipoprotein;protein_id=WJG94331.1;transl_table=11 CP118132.1 Genbank gene 1513677 1514786 . - . ID=gene-PUW35_07380;Name=PUW35_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07380 CP118132.1 Protein Homology CDS 1513677 1514786 . - 0 ID=cds-WJG95050.1;Parent=gene-PUW35_07380;Dbxref=NCBI_GP:WJG95050.1;Name=WJG95050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=PUW35_07380;product=hypothetical protein;protein_id=WJG95050.1;transl_table=11 CP118132.1 Genbank gene 1515178 1516035 . - . ID=gene-PUW35_07385;Name=PUW35_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07385 CP118132.1 Protein Homology CDS 1515178 1516035 . - 0 ID=cds-WJG94332.1;Parent=gene-PUW35_07385;Dbxref=NCBI_GP:WJG94332.1;Name=WJG94332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=PUW35_07385;product=GyrI-like domain-containing protein;protein_id=WJG94332.1;transl_table=11 CP118132.1 Genbank pseudogene 1516329 1517173 . + . ID=gene-PUW35_07390;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=pseudogene;locus_tag=PUW35_07390;pseudo=true CP118132.1 Protein Homology CDS 1516329 1517173 . + 0 ID=cds-PUW35_07390;Parent=gene-PUW35_07390;Note=frameshifted;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=PUW35_07390;product=two-partner-like secretion system exoprotein ZirU;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1517248 1519223 . + . ID=gene-PUW35_07395;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=pseudogene;locus_tag=PUW35_07395;pseudo=true CP118132.1 Protein Homology CDS 1517248 1519223 . + 0 ID=cds-PUW35_07395;Parent=gene-PUW35_07395;Note=frameshifted;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=PUW35_07395;product=two-partner secretion translocator ZirT;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1519244 1520074 . + . ID=gene-PUW35_07400;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=PUW35_07400 CP118132.1 Protein Homology CDS 1519244 1520074 . + 0 ID=cds-WJG94333.1;Parent=gene-PUW35_07400;Dbxref=NCBI_GP:WJG94333.1;Name=WJG94333.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=PUW35_07400;product=two-partner-like secretion system exoprotein ZirS;protein_id=WJG94333.1;transl_table=11 CP118132.1 Genbank pseudogene 1520173 1520535 . + . ID=gene-PUW35_07405;Name=PUW35_07405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07405;pseudo=true CP118132.1 Protein Homology CDS 1520173 1520535 . + 0 ID=cds-PUW35_07405;Parent=gene-PUW35_07405;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=PUW35_07405;product=peroxiredoxin;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1520462 1521172 . - . ID=gene-PUW35_07410;Name=PUW35_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07410 CP118132.1 Protein Homology CDS 1520462 1521172 . - 0 ID=cds-WJG94334.1;Parent=gene-PUW35_07410;Dbxref=NCBI_GP:WJG94334.1;Name=WJG94334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=PUW35_07410;product=B3/4 domain-containing protein;protein_id=WJG94334.1;transl_table=11 CP118132.1 Genbank gene 1521216 1521818 . + . ID=gene-PUW35_07415;Name=PUW35_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07415 CP118132.1 Protein Homology CDS 1521216 1521818 . + 0 ID=cds-WJG94335.1;Parent=gene-PUW35_07415;Dbxref=NCBI_GP:WJG94335.1;Name=WJG94335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=PUW35_07415;product=helix-turn-helix domain-containing protein;protein_id=WJG94335.1;transl_table=11 CP118132.1 Genbank gene 1521900 1522931 . - . ID=gene-PUW35_07420;Name=PUW35_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07420 CP118132.1 Protein Homology CDS 1521900 1522931 . - 0 ID=cds-WJG94336.1;Parent=gene-PUW35_07420;Dbxref=NCBI_GP:WJG94336.1;Name=WJG94336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=PUW35_07420;product=mechanosensitive ion channel family protein;protein_id=WJG94336.1;transl_table=11 CP118132.1 Genbank gene 1523170 1523424 . + . ID=gene-PUW35_07425;Name=PUW35_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07425 CP118132.1 Protein Homology CDS 1523170 1523424 . + 0 ID=cds-WJG94337.1;Parent=gene-PUW35_07425;Dbxref=NCBI_GP:WJG94337.1;Name=WJG94337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=PUW35_07425;product=DUF2534 family protein;protein_id=WJG94337.1;transl_table=11 CP118132.1 Genbank gene 1523479 1524426 . - . ID=gene-PUW35_07430;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=PUW35_07430 CP118132.1 Protein Homology CDS 1523479 1524426 . - 0 ID=cds-WJG94338.1;Parent=gene-PUW35_07430;Dbxref=NCBI_GP:WJG94338.1;Name=WJG94338.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=PUW35_07430;product=universal stress protein UspE;protein_id=WJG94338.1;transl_table=11 CP118132.1 Genbank gene 1524577 1525329 . - . ID=gene-PUW35_07435;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=PUW35_07435 CP118132.1 Protein Homology CDS 1524577 1525329 . - 0 ID=cds-WJG94339.1;Parent=gene-PUW35_07435;Dbxref=NCBI_GP:WJG94339.1;Name=WJG94339.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=PUW35_07435;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WJG94339.1;transl_table=11 CP118132.1 Genbank gene 1525525 1526040 . - . ID=gene-PUW35_07440;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=PUW35_07440 CP118132.1 Protein Homology CDS 1525525 1526040 . - 0 ID=cds-WJG94340.1;Parent=gene-PUW35_07440;Dbxref=NCBI_GP:WJG94340.1;Name=WJG94340.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=PUW35_07440;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WJG94340.1;transl_table=11 CP118132.1 Genbank gene 1526298 1526861 . + . ID=gene-PUW35_07445;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=PUW35_07445 CP118132.1 Protein Homology CDS 1526298 1526861 . + 0 ID=cds-WJG94341.1;Parent=gene-PUW35_07445;Dbxref=NCBI_GP:WJG94341.1;Name=WJG94341.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=PUW35_07445;product=DNA endonuclease SmrA;protein_id=WJG94341.1;transl_table=11 CP118132.1 Genbank gene 1527272 1528426 . + . ID=gene-PUW35_07450;Name=PUW35_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07450 CP118132.1 Protein Homology CDS 1527272 1528426 . + 0 ID=cds-WJG94342.1;Parent=gene-PUW35_07450;Dbxref=NCBI_GP:WJG94342.1;Name=WJG94342.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=PUW35_07450;product=methyl-accepting chemotaxis protein;protein_id=WJG94342.1;transl_table=11 CP118132.1 Genbank gene 1528581 1529555 . + . ID=gene-PUW35_07455;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=PUW35_07455 CP118132.1 Protein Homology CDS 1528581 1529555 . + 0 ID=cds-WJG95051.1;Parent=gene-PUW35_07455;Dbxref=NCBI_GP:WJG95051.1;Name=WJG95051.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=PUW35_07455;product=zinc transporter ZntB;protein_id=WJG95051.1;transl_table=11 CP118132.1 Genbank gene 1529830 1530012 . + . ID=gene-PUW35_07460;Name=PUW35_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07460 CP118132.1 Protein Homology CDS 1529830 1530012 . + 0 ID=cds-WJG94343.1;Parent=gene-PUW35_07460;Dbxref=NCBI_GP:WJG94343.1;Name=WJG94343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=PUW35_07460;product=hypothetical protein;protein_id=WJG94343.1;transl_table=11 CP118132.1 Genbank gene 1530041 1531414 . + . ID=gene-PUW35_07465;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=PUW35_07465 CP118132.1 Protein Homology CDS 1530041 1531414 . + 0 ID=cds-WJG94344.1;Parent=gene-PUW35_07465;Dbxref=NCBI_GP:WJG94344.1;Name=WJG94344.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=PUW35_07465;product=ATP-dependent RNA helicase DbpA;protein_id=WJG94344.1;transl_table=11 CP118132.1 Genbank gene 1531458 1532393 . - . ID=gene-PUW35_07470;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=PUW35_07470 CP118132.1 Protein Homology CDS 1531458 1532393 . - 0 ID=cds-WJG94345.1;Parent=gene-PUW35_07470;Dbxref=NCBI_GP:WJG94345.1;Name=WJG94345.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=PUW35_07470;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WJG94345.1;transl_table=11 CP118132.1 Genbank pseudogene 1532445 1532648 . - . ID=gene-PUW35_07475;Name=PUW35_07475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07475;pseudo=true CP118132.1 Protein Homology CDS 1532445 1532648 . - 0 ID=cds-PUW35_07475;Parent=gene-PUW35_07475;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=PUW35_07475;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1532749 1533087 . + . ID=gene-PUW35_07480;Name=PUW35_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07480 CP118132.1 Protein Homology CDS 1532749 1533087 . + 0 ID=cds-WJG94346.1;Parent=gene-PUW35_07480;Dbxref=NCBI_GP:WJG94346.1;Name=WJG94346.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=PUW35_07480;product=SMR family transporter;protein_id=WJG94346.1;transl_table=11 CP118132.1 Genbank gene 1533137 1533571 . - . ID=gene-PUW35_07485;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=PUW35_07485 CP118132.1 Protein Homology CDS 1533137 1533571 . - 0 ID=cds-WJG94347.1;Parent=gene-PUW35_07485;Dbxref=NCBI_GP:WJG94347.1;Name=WJG94347.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=PUW35_07485;product=universal stress protein UspF;protein_id=WJG94347.1;transl_table=11 CP118132.1 Genbank pseudogene 1534052 1537577 . - . ID=gene-PUW35_07490;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=pseudogene;locus_tag=PUW35_07490;pseudo=true CP118132.1 Protein Homology CDS 1534052 1537577 . - 0 ID=cds-PUW35_07490;Parent=gene-PUW35_07490;Note=frameshifted;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=PUW35_07490;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1537638 1537937 . - . ID=gene-PUW35_07495;Name=PUW35_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07495 CP118132.1 Protein Homology CDS 1537638 1537937 . - 0 ID=cds-WJG94348.1;Parent=gene-PUW35_07495;Dbxref=NCBI_GP:WJG94348.1;Name=WJG94348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=PUW35_07495;product=reverse transcriptase;protein_id=WJG94348.1;transl_table=11 CP118132.1 Genbank gene 1537853 1538119 . + . ID=gene-PUW35_07500;Name=PUW35_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07500 CP118132.1 Protein Homology CDS 1537853 1538119 . + 0 ID=cds-WJG94349.1;Parent=gene-PUW35_07500;Dbxref=NCBI_GP:WJG94349.1;Name=WJG94349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=PUW35_07500;product=DUF333 domain-containing protein;protein_id=WJG94349.1;transl_table=11 CP118132.1 Genbank gene 1538163 1538573 . - . ID=gene-PUW35_07505;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=PUW35_07505 CP118132.1 Protein Homology CDS 1538163 1538573 . - 0 ID=cds-WJG94350.1;Parent=gene-PUW35_07505;Dbxref=NCBI_GP:WJG94350.1;Name=WJG94350.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=PUW35_07505;product=heat shock protein HslJ;protein_id=WJG94350.1;transl_table=11 CP118132.1 Genbank gene 1538684 1539673 . - . ID=gene-PUW35_07510;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=PUW35_07510 CP118132.1 Protein Homology CDS 1538684 1539673 . - 0 ID=cds-WJG94351.1;Parent=gene-PUW35_07510;Dbxref=NCBI_GP:WJG94351.1;Name=WJG94351.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=PUW35_07510;product=D-lactate dehydrogenase;protein_id=WJG94351.1;transl_table=11 CP118132.1 Genbank gene 1539913 1542549 . + . ID=gene-PUW35_07515;Name=PUW35_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07515 CP118132.1 Protein Homology CDS 1539913 1542549 . + 0 ID=cds-WJG94352.1;Parent=gene-PUW35_07515;Dbxref=NCBI_GP:WJG94352.1;Name=WJG94352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=PUW35_07515;product=YdbH family protein;protein_id=WJG94352.1;transl_table=11 CP118132.1 Genbank gene 1542549 1542740 . + . ID=gene-PUW35_07520;Name=PUW35_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07520 CP118132.1 Protein Homology CDS 1542549 1542740 . + 0 ID=cds-WJG94353.1;Parent=gene-PUW35_07520;Dbxref=NCBI_GP:WJG94353.1;Name=WJG94353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=PUW35_07520;product=YnbE family lipoprotein;protein_id=WJG94353.1;transl_table=11 CP118132.1 Genbank gene 1542748 1543071 . + . ID=gene-PUW35_07525;Name=PUW35_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07525 CP118132.1 Protein Homology CDS 1542748 1543071 . + 0 ID=cds-WJG94354.1;Parent=gene-PUW35_07525;Dbxref=NCBI_GP:WJG94354.1;Name=WJG94354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=PUW35_07525;product=YdbL family protein;protein_id=WJG94354.1;transl_table=11 CP118132.1 Genbank gene 1543214 1543663 . + . ID=gene-PUW35_07530;Name=PUW35_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07530 CP118132.1 Protein Homology CDS 1543214 1543663 . + 0 ID=cds-WJG94355.1;Parent=gene-PUW35_07530;Dbxref=NCBI_GP:WJG94355.1;Name=WJG94355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=PUW35_07530;product=GFA family protein;protein_id=WJG94355.1;transl_table=11 CP118132.1 Genbank gene 1543660 1544265 . - . ID=gene-PUW35_07535;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=PUW35_07535 CP118132.1 Protein Homology CDS 1543660 1544265 . - 0 ID=cds-WJG94356.1;Parent=gene-PUW35_07535;Dbxref=NCBI_GP:WJG94356.1;Name=WJG94356.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=PUW35_07535;product=FMN-dependent NADH-azoreductase;protein_id=WJG94356.1;transl_table=11 CP118132.1 Genbank pseudogene 1544466 1548365 . + . ID=gene-PUW35_07540;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=pseudogene;locus_tag=PUW35_07540;pseudo=true CP118132.1 Protein Homology CDS 1544466 1548365 . + 0 ID=cds-PUW35_07540;Parent=gene-PUW35_07540;Note=frameshifted;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=PUW35_07540;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1548429 1549229 . + . ID=gene-PUW35_07545;Name=PUW35_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07545 CP118132.1 Protein Homology CDS 1548429 1549229 . + 0 ID=cds-WJG94357.1;Parent=gene-PUW35_07545;Dbxref=NCBI_GP:WJG94357.1;Name=WJG94357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=PUW35_07545;product=YdcF family protein;protein_id=WJG94357.1;transl_table=11 CP118132.1 Genbank gene 1549346 1549876 . + . ID=gene-PUW35_07550;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=PUW35_07550 CP118132.1 Protein Homology CDS 1549346 1549876 . + 0 ID=cds-WJG94358.1;Parent=gene-PUW35_07550;Dbxref=NCBI_GP:WJG94358.1;Name=WJG94358.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=PUW35_07550;product=cytochrome b561;protein_id=WJG94358.1;transl_table=11 CP118132.1 Genbank gene 1550147 1550809 . - . ID=gene-PUW35_07555;Name=PUW35_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07555 CP118132.1 Protein Homology CDS 1550147 1550809 . - 0 ID=cds-WJG94359.1;Parent=gene-PUW35_07555;Dbxref=NCBI_GP:WJG94359.1;Name=WJG94359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=PUW35_07555;product=class I SAM-dependent methyltransferase;protein_id=WJG94359.1;transl_table=11 CP118132.1 Genbank gene 1551273 1552823 . - . ID=gene-PUW35_07560;Name=PUW35_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07560 CP118132.1 Protein Homology CDS 1551273 1552823 . - 0 ID=cds-WJG94360.1;Parent=gene-PUW35_07560;Dbxref=NCBI_GP:WJG94360.1;Name=WJG94360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=PUW35_07560;product=glycosyltransferase family 39 protein;protein_id=WJG94360.1;transl_table=11 CP118132.1 Genbank gene 1552960 1553640 . - . ID=gene-PUW35_07565;Name=PUW35_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07565 CP118132.1 Protein Homology CDS 1552960 1553640 . - 0 ID=cds-WJG94361.1;Parent=gene-PUW35_07565;Dbxref=NCBI_GP:WJG94361.1;Name=WJG94361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=PUW35_07565;product=amino acid ABC transporter permease;protein_id=WJG94361.1;transl_table=11 CP118132.1 Genbank gene 1553653 1554369 . - . ID=gene-PUW35_07570;Name=PUW35_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07570 CP118132.1 Protein Homology CDS 1553653 1554369 . - 0 ID=cds-WJG94362.1;Parent=gene-PUW35_07570;Dbxref=NCBI_GP:WJG94362.1;Name=WJG94362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196339.1;locus_tag=PUW35_07570;product=amino acid ABC transporter ATP-binding protein;protein_id=WJG94362.1;transl_table=11 CP118132.1 Genbank gene 1554394 1555041 . - . ID=gene-PUW35_07575;Name=PUW35_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07575 CP118132.1 Protein Homology CDS 1554394 1555041 . - 0 ID=cds-WJG94363.1;Parent=gene-PUW35_07575;Dbxref=NCBI_GP:WJG94363.1;Name=WJG94363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=PUW35_07575;product=amino acid ABC transporter permease;protein_id=WJG94363.1;transl_table=11 CP118132.1 Genbank gene 1555048 1555809 . - . ID=gene-PUW35_07580;Name=PUW35_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07580 CP118132.1 Protein Homology CDS 1555048 1555809 . - 0 ID=cds-WJG94364.1;Parent=gene-PUW35_07580;Dbxref=NCBI_GP:WJG94364.1;Name=WJG94364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=PUW35_07580;product=transporter substrate-binding domain-containing protein;protein_id=WJG94364.1;transl_table=11 CP118132.1 Genbank gene 1556717 1557061 . + . ID=gene-PUW35_07585;Name=PUW35_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07585 CP118132.1 Protein Homology CDS 1556717 1557061 . + 0 ID=cds-WJG94365.1;Parent=gene-PUW35_07585;Dbxref=NCBI_GP:WJG94365.1;Name=WJG94365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=PUW35_07585;product=DUF1294 domain-containing protein;protein_id=WJG94365.1;transl_table=11 CP118132.1 Genbank gene 1557182 1558408 . - . ID=gene-PUW35_07590;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=PUW35_07590 CP118132.1 Protein Homology CDS 1557182 1558408 . - 0 ID=cds-WJG94366.1;Parent=gene-PUW35_07590;Dbxref=NCBI_GP:WJG94366.1;Name=WJG94366.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=PUW35_07590;product=SPI-2 type III secretion system effector SseJ;protein_id=WJG94366.1;transl_table=11 CP118132.1 Genbank gene 1558834 1559550 . + . ID=gene-PUW35_07595;Name=PUW35_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07595 CP118132.1 Protein Homology CDS 1558834 1559550 . + 0 ID=cds-WJG94367.1;Parent=gene-PUW35_07595;Dbxref=NCBI_GP:WJG94367.1;Name=WJG94367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=PUW35_07595;product=hypothetical protein;protein_id=WJG94367.1;transl_table=11 CP118132.1 Genbank gene 1559679 1560080 . - . ID=gene-PUW35_07600;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=PUW35_07600 CP118132.1 Protein Homology CDS 1559679 1560080 . - 0 ID=cds-WJG94368.1;Parent=gene-PUW35_07600;Dbxref=NCBI_GP:WJG94368.1;Name=WJG94368.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=PUW35_07600;product=type III secretion system effector SteB;protein_id=WJG94368.1;transl_table=11 CP118132.1 Genbank gene 1560603 1560878 . + . ID=gene-PUW35_07605;Name=PUW35_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07605 CP118132.1 Protein Homology CDS 1560603 1560878 . + 0 ID=cds-WJG94369.1;Parent=gene-PUW35_07605;Dbxref=NCBI_GP:WJG94369.1;Name=WJG94369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=PUW35_07605;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WJG94369.1;transl_table=11 CP118132.1 Genbank gene 1560910 1562028 . + . ID=gene-PUW35_07610;Name=PUW35_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07610 CP118132.1 Protein Homology CDS 1560910 1562028 . + 0 ID=cds-WJG94370.1;Parent=gene-PUW35_07610;Dbxref=NCBI_GP:WJG94370.1;Name=WJG94370.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=PUW35_07610;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WJG94370.1;transl_table=11 CP118132.1 Genbank gene 1562197 1563822 . + . ID=gene-PUW35_07615;Name=PUW35_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07615 CP118132.1 Protein Homology CDS 1562197 1563822 . + 0 ID=cds-WJG94371.1;Parent=gene-PUW35_07615;Dbxref=NCBI_GP:WJG94371.1;Name=WJG94371.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=PUW35_07615;product=methyl-accepting chemotaxis protein;protein_id=WJG94371.1;transl_table=11 CP118132.1 Genbank gene 1563883 1564806 . - . ID=gene-PUW35_07620;Name=PUW35_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07620 CP118132.1 Protein Homology CDS 1563883 1564806 . - 0 ID=cds-WJG94372.1;Parent=gene-PUW35_07620;Dbxref=NCBI_GP:WJG94372.1;Name=WJG94372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=PUW35_07620;product=LysR substrate-binding domain-containing protein;protein_id=WJG94372.1;transl_table=11 CP118132.1 Genbank gene 1565099 1566442 . + . ID=gene-PUW35_07625;Name=PUW35_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07625 CP118132.1 Protein Homology CDS 1565099 1566442 . + 0 ID=cds-WJG94373.1;Parent=gene-PUW35_07625;Dbxref=NCBI_GP:WJG94373.1;Name=WJG94373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=PUW35_07625;product=VOC family protein;protein_id=WJG94373.1;transl_table=11 CP118132.1 Genbank gene 1566491 1567999 . + . ID=gene-PUW35_07630;Name=PUW35_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07630 CP118132.1 Protein Homology CDS 1566491 1567999 . + 0 ID=cds-WJG94374.1;Parent=gene-PUW35_07630;Dbxref=NCBI_GP:WJG94374.1;Name=WJG94374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=PUW35_07630;product=carboxylesterase/lipase family protein;protein_id=WJG94374.1;transl_table=11 CP118132.1 Genbank gene 1568219 1569874 . + . ID=gene-PUW35_07635;Name=PUW35_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07635 CP118132.1 Protein Homology CDS 1568219 1569874 . + 0 ID=cds-WJG94375.1;Parent=gene-PUW35_07635;Dbxref=NCBI_GP:WJG94375.1;Name=WJG94375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=PUW35_07635;product=glucan biosynthesis protein;protein_id=WJG94375.1;transl_table=11 CP118132.1 Genbank gene 1570070 1570645 . + . ID=gene-PUW35_07640;Name=PUW35_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07640 CP118132.1 Protein Homology CDS 1570070 1570645 . + 0 ID=cds-WJG94376.1;Parent=gene-PUW35_07640;Dbxref=NCBI_GP:WJG94376.1;Name=WJG94376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=PUW35_07640;product=YceI family protein;protein_id=WJG94376.1;transl_table=11 CP118132.1 Genbank gene 1570823 1571542 . - . ID=gene-PUW35_07645;Name=PUW35_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07645 CP118132.1 Protein Homology CDS 1570823 1571542 . - 0 ID=cds-WJG94377.1;Parent=gene-PUW35_07645;Dbxref=NCBI_GP:WJG94377.1;Name=WJG94377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=PUW35_07645;product=FadR/GntR family transcriptional regulator;protein_id=WJG94377.1;transl_table=11 CP118132.1 Genbank gene 1571632 1572723 . - . ID=gene-PUW35_07650;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=PUW35_07650 CP118132.1 Protein Homology CDS 1571632 1572723 . - 0 ID=cds-WJG95052.1;Parent=gene-PUW35_07650;Dbxref=NCBI_GP:WJG95052.1;Name=WJG95052.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=PUW35_07650;product=L-idonate 5-dehydrogenase;protein_id=WJG95052.1;transl_table=11 CP118132.1 Genbank gene 1572692 1574053 . - . ID=gene-PUW35_07655;Name=PUW35_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07655 CP118132.1 Protein Homology CDS 1572692 1574053 . - 0 ID=cds-WJG95053.1;Parent=gene-PUW35_07655;Dbxref=NCBI_GP:WJG95053.1;Name=WJG95053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=PUW35_07655;product=MFS transporter;protein_id=WJG95053.1;transl_table=11 CP118132.1 Genbank gene 1574137 1574904 . - . ID=gene-PUW35_07660;Name=PUW35_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07660 CP118132.1 Protein Homology CDS 1574137 1574904 . - 0 ID=cds-WJG94378.1;Parent=gene-PUW35_07660;Dbxref=NCBI_GP:WJG94378.1;Name=WJG94378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=PUW35_07660;product=SDR family oxidoreductase;protein_id=WJG94378.1;transl_table=11 CP118132.1 Genbank gene 1575241 1576494 . + . ID=gene-PUW35_07665;Name=PUW35_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07665 CP118132.1 Protein Homology CDS 1575241 1576494 . + 0 ID=cds-WJG94379.1;Parent=gene-PUW35_07665;Dbxref=NCBI_GP:WJG94379.1;Name=WJG94379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=PUW35_07665;product=enolase C-terminal domain-like protein;protein_id=WJG94379.1;transl_table=11 CP118132.1 Genbank gene 1576635 1577072 . - . ID=gene-PUW35_07670;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=PUW35_07670 CP118132.1 Protein Homology CDS 1576635 1577072 . - 0 ID=cds-WJG94380.1;Parent=gene-PUW35_07670;Dbxref=NCBI_GP:WJG94380.1;Name=WJG94380.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=PUW35_07670;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WJG94380.1;transl_table=11 CP118132.1 Genbank gene 1577072 1577863 . - . ID=gene-PUW35_07675;Name=PUW35_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07675 CP118132.1 Protein Homology CDS 1577072 1577863 . - 0 ID=cds-WJG94381.1;Parent=gene-PUW35_07675;Dbxref=NCBI_GP:WJG94381.1;Name=WJG94381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=PUW35_07675;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG94381.1;transl_table=11 CP118132.1 Genbank gene 1577879 1578511 . - . ID=gene-PUW35_07680;Name=PUW35_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07680 CP118132.1 Protein Homology CDS 1577879 1578511 . - 0 ID=cds-WJG94382.1;Parent=gene-PUW35_07680;Dbxref=NCBI_GP:WJG94382.1;Name=WJG94382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=PUW35_07680;product=ribulose-phosphate 3 epimerase family protein;protein_id=WJG94382.1;transl_table=11 CP118132.1 Genbank gene 1578523 1578960 . - . ID=gene-PUW35_07685;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=PUW35_07685 CP118132.1 Protein Homology CDS 1578523 1578960 . - 0 ID=cds-WJG94383.1;Parent=gene-PUW35_07685;Dbxref=NCBI_GP:WJG94383.1;Name=WJG94383.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=PUW35_07685;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WJG94383.1;transl_table=11 CP118132.1 Genbank gene 1579092 1579898 . - . ID=gene-PUW35_07690;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=PUW35_07690 CP118132.1 Protein Homology CDS 1579092 1579898 . - 0 ID=cds-WJG94384.1;Parent=gene-PUW35_07690;Dbxref=NCBI_GP:WJG94384.1;Name=WJG94384.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=PUW35_07690;product=BtpA family protein SgcQ;protein_id=WJG94384.1;transl_table=11 CP118132.1 Genbank gene 1579912 1581225 . - . ID=gene-PUW35_07695;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=PUW35_07695 CP118132.1 Protein Homology CDS 1579912 1581225 . - 0 ID=cds-WJG94385.1;Parent=gene-PUW35_07695;Dbxref=NCBI_GP:WJG94385.1;Name=WJG94385.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=PUW35_07695;product=PTS sugar transporter subunit IIC SgcC;protein_id=WJG94385.1;transl_table=11 CP118132.1 Genbank gene 1581236 1581517 . - . ID=gene-PUW35_07700;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=PUW35_07700 CP118132.1 Protein Homology CDS 1581236 1581517 . - 0 ID=cds-WJG94386.1;Parent=gene-PUW35_07700;Dbxref=NCBI_GP:WJG94386.1;Name=WJG94386.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=PUW35_07700;product=PTS sugar transporter subunit IIB SgcB;protein_id=WJG94386.1;transl_table=11 CP118132.1 Genbank gene 1581514 1582632 . - . ID=gene-PUW35_07705;Name=PUW35_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07705 CP118132.1 Protein Homology CDS 1581514 1582632 . - 0 ID=cds-WJG94387.1;Parent=gene-PUW35_07705;Dbxref=NCBI_GP:WJG94387.1;Name=WJG94387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=PUW35_07705;product=M42 family metallopeptidase;protein_id=WJG94387.1;transl_table=11 CP118132.1 Genbank gene 1582849 1583388 . + . ID=gene-PUW35_07710;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=PUW35_07710 CP118132.1 Protein Homology CDS 1582849 1583388 . + 0 ID=cds-WJG94388.1;Parent=gene-PUW35_07710;Dbxref=NCBI_GP:WJG94388.1;Name=WJG94388.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=PUW35_07710;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WJG94388.1;transl_table=11 CP118132.1 Genbank gene 1583385 1584365 . - . ID=gene-PUW35_07715;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=PUW35_07715 CP118132.1 Protein Homology CDS 1583385 1584365 . - 0 ID=cds-WJG94389.1;Parent=gene-PUW35_07715;Dbxref=NCBI_GP:WJG94389.1;Name=WJG94389.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=PUW35_07715;product=YdcK family protein;protein_id=WJG94389.1;transl_table=11 CP118132.1 Genbank gene 1584472 1585485 . + . ID=gene-PUW35_07720;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=PUW35_07720 CP118132.1 Protein Homology CDS 1584472 1585485 . + 0 ID=cds-WJG94390.1;Parent=gene-PUW35_07720;Dbxref=NCBI_GP:WJG94390.1;Name=WJG94390.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=PUW35_07720;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WJG94390.1;transl_table=11 CP118132.1 Genbank gene 1585472 1586068 . + . ID=gene-PUW35_07725;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=PUW35_07725 CP118132.1 Protein Homology CDS 1585472 1586068 . + 0 ID=cds-WJG94391.1;Parent=gene-PUW35_07725;Dbxref=NCBI_GP:WJG94391.1;Name=WJG94391.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=PUW35_07725;product=tellurite resistance methyltransferase TehB;protein_id=WJG94391.1;transl_table=11 CP118132.1 Genbank gene 1586224 1586892 . + . ID=gene-PUW35_07730;Name=PUW35_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07730 CP118132.1 Protein Homology CDS 1586224 1586892 . + 0 ID=cds-WJG94392.1;Parent=gene-PUW35_07730;Dbxref=NCBI_GP:WJG94392.1;Name=WJG94392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=PUW35_07730;product=DUF3313 domain-containing protein;protein_id=WJG94392.1;transl_table=11 CP118132.1 Genbank gene 1586946 1588124 . - . ID=gene-PUW35_07735;Name=PUW35_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07735 CP118132.1 Protein Homology CDS 1586946 1588124 . - 0 ID=cds-WJG94393.1;Parent=gene-PUW35_07735;Dbxref=NCBI_GP:WJG94393.1;Name=WJG94393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=PUW35_07735;product=benzoate/H(+) symporter BenE family transporter;protein_id=WJG94393.1;transl_table=11 CP118132.1 Genbank gene 1588216 1588752 . + . ID=gene-PUW35_07740;Name=PUW35_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07740 CP118132.1 Protein Homology CDS 1588216 1588752 . + 0 ID=cds-WJG94394.1;Parent=gene-PUW35_07740;Dbxref=NCBI_GP:WJG94394.1;Name=WJG94394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369539.1;locus_tag=PUW35_07740;product=XRE family transcriptional regulator;protein_id=WJG94394.1;transl_table=11 CP118132.1 Genbank gene 1588831 1590795 . + . ID=gene-PUW35_07745;Name=PUW35_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07745 CP118132.1 Protein Homology CDS 1588831 1590795 . + 0 ID=cds-WJG94395.1;Parent=gene-PUW35_07745;Dbxref=NCBI_GP:WJG94395.1;Name=WJG94395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=PUW35_07745;product=U32 family peptidase;protein_id=WJG94395.1;transl_table=11 CP118132.1 Genbank gene 1590796 1591026 . - . ID=gene-PUW35_07750;Name=PUW35_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07750 CP118132.1 Protein Homology CDS 1590796 1591026 . - 0 ID=cds-WJG95054.1;Parent=gene-PUW35_07750;Dbxref=NCBI_GP:WJG95054.1;Name=WJG95054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=PUW35_07750;product=DUF2554 family protein;protein_id=WJG95054.1;transl_table=11 CP118132.1 Genbank pseudogene 1591300 1592249 . - . ID=gene-PUW35_07755;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=pseudogene;locus_tag=PUW35_07755;pseudo=true CP118132.1 Protein Homology CDS 1591300 1592249 . - 0 ID=cds-PUW35_07755;Parent=gene-PUW35_07755;Note=frameshifted;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=PUW35_07755;product=SPI-2 type III secretion system effector SifB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1592786 1593184 . + . ID=gene-PUW35_07760;Name=PUW35_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07760 CP118132.1 Protein Homology CDS 1592786 1593184 . + 0 ID=cds-WJG94396.1;Parent=gene-PUW35_07760;Dbxref=NCBI_GP:WJG94396.1;Name=WJG94396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=PUW35_07760;product=D-alanyl-D-alanine dipeptidase;protein_id=WJG94396.1;transl_table=11 CP118132.1 Genbank gene 1593217 1593447 . + . ID=gene-PUW35_07765;Name=PUW35_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07765 CP118132.1 Protein Homology CDS 1593217 1593447 . + 0 ID=cds-WJG94397.1;Parent=gene-PUW35_07765;Dbxref=NCBI_GP:WJG94397.1;Name=WJG94397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=PUW35_07765;product=hypothetical protein;protein_id=WJG94397.1;transl_table=11 CP118132.1 Genbank gene 1593706 1594476 . + . ID=gene-PUW35_07770;Name=PUW35_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07770 CP118132.1 Protein Homology CDS 1593706 1594476 . + 0 ID=cds-WJG94398.1;Parent=gene-PUW35_07770;Dbxref=NCBI_GP:WJG94398.1;Name=WJG94398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=PUW35_07770;product=M15 family metallopeptidase;protein_id=WJG94398.1;transl_table=11 CP118132.1 Genbank gene 1594612 1596036 . + . ID=gene-PUW35_07775;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=PUW35_07775 CP118132.1 Protein Homology CDS 1594612 1596036 . + 0 ID=cds-WJG94399.1;Parent=gene-PUW35_07775;Dbxref=NCBI_GP:WJG94399.1;Name=WJG94399.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=PUW35_07775;product=GntR family transcriptional regulator YdcR;protein_id=WJG94399.1;transl_table=11 CP118132.1 Genbank pseudogene 1596172 1597595 . + . ID=gene-PUW35_07780;Name=patD;gbkey=Gene;gene=patD;gene_biotype=pseudogene;locus_tag=PUW35_07780;pseudo=true CP118132.1 Protein Homology CDS 1596172 1597595 . + 0 ID=cds-PUW35_07780;Parent=gene-PUW35_07780;Note=frameshifted;Ontology_term=GO:0009447,GO:0019145;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase activity|0019145||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310075.1;locus_tag=PUW35_07780;product=aminobutyraldehyde dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1597700 1597795 . - . ID=gene-PUW35_07785;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=PUW35_07785 CP118132.1 Protein Homology CDS 1597700 1597795 . - 0 ID=cds-WJG94400.1;Parent=gene-PUW35_07785;Dbxref=NCBI_GP:WJG94400.1;Name=WJG94400.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=PUW35_07785;product=stress response membrane protein YncL;protein_id=WJG94400.1;transl_table=11 CP118132.1 Genbank gene 1597994 1598167 . + . ID=gene-PUW35_07790;Name=PUW35_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07790 CP118132.1 Protein Homology CDS 1597994 1598167 . + 0 ID=cds-WJG95055.1;Parent=gene-PUW35_07790;Dbxref=NCBI_GP:WJG95055.1;Name=WJG95055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=PUW35_07790;product=GhoT/OrtT family toxin;protein_id=WJG95055.1;transl_table=11 CP118132.1 Genbank gene 1598212 1600356 . - . ID=gene-PUW35_07795;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=PUW35_07795 CP118132.1 Protein Homology CDS 1598212 1600356 . - 0 ID=cds-WJG94401.1;Parent=gene-PUW35_07795;Dbxref=NCBI_GP:WJG94401.1;Name=WJG94401.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=PUW35_07795;product=virulence-associated effector SrfC;protein_id=WJG94401.1;transl_table=11 CP118132.1 Genbank pseudogene 1600353 1602149 . - . ID=gene-PUW35_07800;Name=PUW35_07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07800;pseudo=true CP118132.1 Protein Homology CDS 1600353 1602149 . - 0 ID=cds-PUW35_07800;Parent=gene-PUW35_07800;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW35_07800;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1602151 1603029 . + . ID=gene-PUW35_07805;Name=PUW35_07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07805;pseudo=true CP118132.1 Protein Homology CDS 1602151 1603029 . + 0 ID=cds-PUW35_07805;Parent=gene-PUW35_07805;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW35_07805;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1603022 1603375 . - . ID=gene-PUW35_07810;Name=PUW35_07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07810;pseudo=true CP118132.1 Protein Homology CDS 1603022 1603375 . - 0 ID=cds-PUW35_07810;Parent=gene-PUW35_07810;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW35_07810;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1603380 1604705 . - . ID=gene-PUW35_07815;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=PUW35_07815 CP118132.1 Protein Homology CDS 1603380 1604705 . - 0 ID=cds-WJG94402.1;Parent=gene-PUW35_07815;Dbxref=NCBI_GP:WJG94402.1;Name=WJG94402.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=PUW35_07815;product=virulence-associated effector SrfA;protein_id=WJG94402.1;transl_table=11 CP118132.1 Genbank gene 1604929 1605162 . + . ID=gene-PUW35_07820;Name=PUW35_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07820 CP118132.1 Protein Homology CDS 1604929 1605162 . + 0 ID=cds-WJG94403.1;Parent=gene-PUW35_07820;Dbxref=NCBI_GP:WJG94403.1;Name=WJG94403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=PUW35_07820;product=YdcY family protein;protein_id=WJG94403.1;transl_table=11 CP118132.1 Genbank gene 1605167 1605616 . - . ID=gene-PUW35_07825;Name=PUW35_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07825 CP118132.1 Protein Homology CDS 1605167 1605616 . - 0 ID=cds-WJG94404.1;Parent=gene-PUW35_07825;Dbxref=NCBI_GP:WJG94404.1;Name=WJG94404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=PUW35_07825;product=DMT family transporter;protein_id=WJG94404.1;transl_table=11 CP118132.1 Genbank gene 1605616 1606131 . - . ID=gene-PUW35_07830;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=PUW35_07830 CP118132.1 Protein Homology CDS 1605616 1606131 . - 0 ID=cds-WJG94405.1;Parent=gene-PUW35_07830;Dbxref=NCBI_GP:WJG94405.1;Name=WJG94405.1;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=PUW35_07830;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WJG94405.1;transl_table=11 CP118132.1 Genbank pseudogene 1606343 1607379 . + . ID=gene-PUW35_07835;Name=PUW35_07835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07835;pseudo=true CP118132.1 Protein Homology CDS 1606343 1607379 . + 0 ID=cds-PUW35_07835;Parent=gene-PUW35_07835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=PUW35_07835;product=NADP-dependent oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1607713 1608378 . + . ID=gene-PUW35_07840;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=PUW35_07840 CP118132.1 Protein Homology CDS 1607713 1608378 . + 0 ID=cds-WJG94406.1;Parent=gene-PUW35_07840;Dbxref=NCBI_GP:WJG94406.1;Name=WJG94406.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=PUW35_07840;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WJG94406.1;transl_table=11 CP118132.1 Genbank pseudogene 1608434 1610553 . - . ID=gene-PUW35_07845;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=pseudogene;locus_tag=PUW35_07845;pseudo=true CP118132.1 Protein Homology CDS 1608434 1610553 . - 0 ID=cds-PUW35_07845;Parent=gene-PUW35_07845;Note=frameshifted;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=PUW35_07845;product=TonB-dependent receptor PqqU;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1610817 1611882 . + . ID=gene-PUW35_07850;Name=PUW35_07850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07850;pseudo=true CP118132.1 Protein Homology CDS 1610817 1611882 . + 0 ID=cds-PUW35_07850;Parent=gene-PUW35_07850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=PUW35_07850;product=YncE family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1611836 1611988 . + . ID=gene-PUW35_07855;Name=PUW35_07855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_07855;pseudo=true CP118132.1 Protein Homology CDS 1611836 1611988 . + 0 ID=cds-PUW35_07855;Parent=gene-PUW35_07855;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=PUW35_07855;product=YgdI/YgdR family lipoprotein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1612065 1613558 . - . ID=gene-PUW35_07860;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=PUW35_07860 CP118132.1 Protein Homology CDS 1612065 1613558 . - 0 ID=cds-WJG94407.1;Parent=gene-PUW35_07860;Dbxref=NCBI_GP:WJG94407.1;Name=WJG94407.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=PUW35_07860;product=L-asparagine permease;protein_id=WJG94407.1;transl_table=11 CP118132.1 Genbank gene 1614071 1614703 . + . ID=gene-PUW35_07865;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=PUW35_07865 CP118132.1 Protein Homology CDS 1614071 1614703 . + 0 ID=cds-WJG94408.1;Parent=gene-PUW35_07865;Dbxref=NCBI_GP:WJG94408.1;Name=WJG94408.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=PUW35_07865;product=type III secretion system effector SteA;protein_id=WJG94408.1;transl_table=11 CP118132.1 Genbank gene 1614987 1615832 . + . ID=gene-PUW35_07870;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=PUW35_07870 CP118132.1 Protein Homology CDS 1614987 1615832 . + 0 ID=cds-WJG94409.1;Parent=gene-PUW35_07870;Dbxref=NCBI_GP:WJG94409.1;Name=WJG94409.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=PUW35_07870;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WJG94409.1;transl_table=11 CP118132.1 Genbank gene 1615868 1616761 . - . ID=gene-PUW35_07875;Name=PUW35_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07875 CP118132.1 Protein Homology CDS 1615868 1616761 . - 0 ID=cds-WJG94410.1;Parent=gene-PUW35_07875;Dbxref=NCBI_GP:WJG94410.1;Name=WJG94410.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=PUW35_07875;product=PhzF family isomerase;protein_id=WJG94410.1;transl_table=11 CP118132.1 Genbank gene 1616867 1617547 . - . ID=gene-PUW35_07880;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PUW35_07880 CP118132.1 Protein Homology CDS 1616867 1617547 . - 0 ID=cds-WJG94411.1;Parent=gene-PUW35_07880;Dbxref=NCBI_GP:WJG94411.1;Name=WJG94411.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=PUW35_07880;product=respiratory nitrate reductase subunit gamma;protein_id=WJG94411.1;transl_table=11 CP118132.1 Genbank gene 1617544 1618239 . - . ID=gene-PUW35_07885;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=PUW35_07885 CP118132.1 Protein Homology CDS 1617544 1618239 . - 0 ID=cds-WJG94412.1;Parent=gene-PUW35_07885;Dbxref=NCBI_GP:WJG94412.1;Name=WJG94412.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=PUW35_07885;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WJG94412.1;transl_table=11 CP118132.1 Genbank gene 1618239 1619783 . - . ID=gene-PUW35_07890;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PUW35_07890 CP118132.1 Protein Homology CDS 1618239 1619783 . - 0 ID=cds-WJG94413.1;Parent=gene-PUW35_07890;Dbxref=NCBI_GP:WJG94413.1;Name=WJG94413.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=PUW35_07890;product=nitrate reductase subunit beta;protein_id=WJG94413.1;transl_table=11 CP118132.1 Genbank gene 1619780 1623520 . - . ID=gene-PUW35_07895;Name=PUW35_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07895 CP118132.1 Protein Homology CDS 1619780 1623520 . - 0 ID=cds-WJG94414.1;Parent=gene-PUW35_07895;Dbxref=NCBI_GP:WJG94414.1;Name=WJG94414.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=PUW35_07895;product=nitrate reductase subunit alpha;protein_id=WJG94414.1;transl_table=11 CP118132.1 Genbank gene 1623612 1625000 . - . ID=gene-PUW35_07900;Name=PUW35_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07900 CP118132.1 Protein Homology CDS 1623612 1625000 . - 0 ID=cds-WJG94415.1;Parent=gene-PUW35_07900;Dbxref=NCBI_GP:WJG94415.1;Name=WJG94415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=PUW35_07900;product=NarK family nitrate/nitrite MFS transporter;protein_id=WJG94415.1;transl_table=11 CP118132.1 Genbank gene 1625215 1625793 . - . ID=gene-PUW35_07905;Name=PUW35_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07905 CP118132.1 Protein Homology CDS 1625215 1625793 . - 0 ID=cds-WJG94416.1;Parent=gene-PUW35_07905;Dbxref=NCBI_GP:WJG94416.1;Name=WJG94416.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=PUW35_07905;product=TetR family transcriptional regulator;protein_id=WJG94416.1;transl_table=11 CP118132.1 Genbank gene 1625911 1627398 . + . ID=gene-PUW35_07910;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=PUW35_07910 CP118132.1 Protein Homology CDS 1625911 1627398 . + 0 ID=cds-WJG94417.1;Parent=gene-PUW35_07910;Dbxref=NCBI_GP:WJG94417.1;Name=WJG94417.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=PUW35_07910;product=methyl viologen efflux MFS transporter SmvA;protein_id=WJG94417.1;transl_table=11 CP118132.1 Genbank gene 1627423 1627803 . - . ID=gene-PUW35_07915;Name=PUW35_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07915 CP118132.1 Protein Homology CDS 1627423 1627803 . - 0 ID=cds-WJG95056.1;Parent=gene-PUW35_07915;Dbxref=NCBI_GP:WJG95056.1;Name=WJG95056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=PUW35_07915;product=GFA family protein;protein_id=WJG95056.1;transl_table=11 CP118132.1 Genbank gene 1627947 1629035 . - . ID=gene-PUW35_07920;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=PUW35_07920 CP118132.1 Protein Homology CDS 1627947 1629035 . - 0 ID=cds-WJG94418.1;Parent=gene-PUW35_07920;Dbxref=NCBI_GP:WJG94418.1;Name=WJG94418.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=PUW35_07920;product=porin OmpD;protein_id=WJG94418.1;transl_table=11 CP118132.1 Genbank gene 1629559 1630440 . - . ID=gene-PUW35_07925;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=PUW35_07925 CP118132.1 Protein Homology CDS 1629559 1630440 . - 0 ID=cds-WJG94419.1;Parent=gene-PUW35_07925;Dbxref=NCBI_GP:WJG94419.1;Name=WJG94419.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=PUW35_07925;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WJG94419.1;transl_table=11 CP118132.1 Genbank gene 1630718 1633765 . + . ID=gene-PUW35_07930;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PUW35_07930 CP118132.1 Protein Homology CDS 1630718 1633765 . + 0 ID=cds-WJG94420.1;Parent=gene-PUW35_07930;Dbxref=NCBI_GP:WJG94420.1;Name=WJG94420.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=PUW35_07930;product=formate dehydrogenase-N subunit alpha;protein_id=WJG94420.1;transl_except=(pos:1631303..1631305%2Caa:Sec);transl_table=11 CP118132.1 Genbank gene 1633779 1634663 . + . ID=gene-PUW35_07935;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PUW35_07935 CP118132.1 Protein Homology CDS 1633779 1634663 . + 0 ID=cds-WJG94421.1;Parent=gene-PUW35_07935;Dbxref=NCBI_GP:WJG94421.1;Name=WJG94421.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=PUW35_07935;product=formate dehydrogenase subunit beta;protein_id=WJG94421.1;transl_table=11 CP118132.1 Genbank gene 1634656 1635312 . + . ID=gene-PUW35_07940;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=PUW35_07940 CP118132.1 Protein Homology CDS 1634656 1635312 . + 0 ID=cds-WJG94422.1;Parent=gene-PUW35_07940;Dbxref=NCBI_GP:WJG94422.1;Name=WJG94422.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=PUW35_07940;product=formate dehydrogenase-N subunit gamma;protein_id=WJG94422.1;transl_table=11 CP118132.1 Genbank gene 1635403 1636404 . - . ID=gene-PUW35_07945;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=PUW35_07945 CP118132.1 Protein Homology CDS 1635403 1636404 . - 0 ID=cds-WJG94423.1;Parent=gene-PUW35_07945;Dbxref=NCBI_GP:WJG94423.1;Name=WJG94423.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=PUW35_07945;product=alcohol dehydrogenase AdhP;protein_id=WJG94423.1;transl_table=11 CP118132.1 Genbank gene 1636686 1638383 . - . ID=gene-PUW35_07950;Name=PUW35_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07950 CP118132.1 Protein Homology CDS 1636686 1638383 . - 0 ID=cds-WJG94424.1;Parent=gene-PUW35_07950;Dbxref=NCBI_GP:WJG94424.1;Name=WJG94424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=PUW35_07950;product=NAD-dependent malic enzyme;protein_id=WJG94424.1;transl_table=11 CP118132.1 Genbank gene 1638560 1638703 . - . ID=gene-PUW35_07955;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=PUW35_07955 CP118132.1 Protein Homology CDS 1638560 1638703 . - 0 ID=cds-WJG94425.1;Parent=gene-PUW35_07955;Dbxref=NCBI_GP:WJG94425.1;Name=WJG94425.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=PUW35_07955;product=stationary-phase-induced ribosome-associated protein;protein_id=WJG94425.1;transl_table=11 CP118132.1 Genbank gene 1638798 1639013 . - . ID=gene-PUW35_07960;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=PUW35_07960 CP118132.1 Protein Homology CDS 1638798 1639013 . - 0 ID=cds-WJG94426.1;Parent=gene-PUW35_07960;Dbxref=NCBI_GP:WJG94426.1;Name=WJG94426.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=PUW35_07960;product=biofilm-dependent modulation protein;protein_id=WJG94426.1;transl_table=11 CP118132.1 Genbank gene 1639526 1639957 . + . ID=gene-PUW35_07965;Name=PUW35_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07965 CP118132.1 Protein Homology CDS 1639526 1639957 . + 0 ID=cds-WJG94427.1;Parent=gene-PUW35_07965;Dbxref=NCBI_GP:WJG94427.1;Name=WJG94427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=PUW35_07965;product=OsmC family protein;protein_id=WJG94427.1;transl_table=11 CP118132.1 Genbank gene 1640307 1640636 . + . ID=gene-PUW35_07970;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=PUW35_07970 CP118132.1 Protein Homology CDS 1640307 1640636 . + 0 ID=cds-WJG94428.1;Parent=gene-PUW35_07970;Dbxref=NCBI_GP:WJG94428.1;Name=WJG94428.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=PUW35_07970;product=acid-activated periplasmic chaperone HdeB;protein_id=WJG94428.1;transl_table=11 CP118132.1 Genbank gene 1640779 1641564 . + . ID=gene-PUW35_07975;Name=PUW35_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07975 CP118132.1 Protein Homology CDS 1640779 1641564 . + 0 ID=cds-WJG94429.1;Parent=gene-PUW35_07975;Dbxref=NCBI_GP:WJG94429.1;Name=WJG94429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=PUW35_07975;product=OBAP family protein;protein_id=WJG94429.1;transl_table=11 CP118132.1 Genbank gene 1641788 1643476 . + . ID=gene-PUW35_07980;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=PUW35_07980 CP118132.1 Protein Homology CDS 1641788 1643476 . + 0 ID=cds-WJG94430.1;Parent=gene-PUW35_07980;Dbxref=NCBI_GP:WJG94430.1;Name=WJG94430.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944943.1;locus_tag=PUW35_07980;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WJG94430.1;transl_table=11 CP118132.1 Genbank pseudogene 1643473 1646002 . + . ID=gene-PUW35_07985;Name=treY;gbkey=Gene;gene=treY;gene_biotype=pseudogene;locus_tag=PUW35_07985;pseudo=true CP118132.1 Protein Homology CDS 1643473 1646002 . + 0 ID=cds-PUW35_07985;Parent=gene-PUW35_07985;Note=frameshifted;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=PUW35_07985;product=malto-oligosyltrehalose synthase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1646059 1648134 . + . ID=gene-PUW35_07990;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PUW35_07990 CP118132.1 Protein Homology CDS 1646059 1648134 . + 0 ID=cds-WJG94431.1;Parent=gene-PUW35_07990;Dbxref=NCBI_GP:WJG94431.1;Name=WJG94431.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=PUW35_07990;product=glycogen debranching protein GlgX;protein_id=WJG94431.1;transl_table=11 CP118132.1 Genbank gene 1648247 1649449 . - . ID=gene-PUW35_07995;Name=PUW35_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_07995 CP118132.1 Protein Homology CDS 1648247 1649449 . - 0 ID=cds-WJG94432.1;Parent=gene-PUW35_07995;Dbxref=NCBI_GP:WJG94432.1;Name=WJG94432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=PUW35_07995;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WJG94432.1;transl_table=11 CP118132.1 Genbank pseudogene 1649462 1649752 . - . ID=gene-PUW35_08000;Name=PUW35_08000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08000;pseudo=true CP118132.1 Protein Homology CDS 1649462 1649752 . - 0 ID=cds-PUW35_08000;Parent=gene-PUW35_08000;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=PUW35_08000;product=Na+/H+ antiporter NhaC family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1649752 1650330 . - . ID=gene-PUW35_08005;Name=PUW35_08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08005;pseudo=true CP118132.1 Protein Homology CDS 1649752 1650330 . - 0 ID=cds-PUW35_08005;Parent=gene-PUW35_08005;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=PUW35_08005;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1650561 1650842 . + . ID=gene-PUW35_08010;Name=PUW35_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08010 CP118132.1 Protein Homology CDS 1650561 1650842 . + 0 ID=cds-WJG94433.1;Parent=gene-PUW35_08010;Dbxref=NCBI_GP:WJG94433.1;Name=WJG94433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742002.1;locus_tag=PUW35_08010;product=hypothetical protein;protein_id=WJG94433.1;transl_table=11 CP118132.1 Genbank pseudogene 1651131 1651298 . - . ID=gene-PUW35_08015;Name=PUW35_08015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08015;pseudo=true CP118132.1 Protein Homology CDS 1651131 1651298 . - 0 ID=cds-PUW35_08015;Parent=gene-PUW35_08015;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=PUW35_08015;product=DUF1493 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1651298 1651714 . + . ID=gene-PUW35_08020;Name=PUW35_08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08020;pseudo=true CP118132.1 Protein Homology CDS 1651298 1651714 . + 0 ID=cds-PUW35_08020;Parent=gene-PUW35_08020;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=PUW35_08020;product=PhoPQ-activated protein PqaA family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1651711 1652301 . + . ID=gene-PUW35_08025;Name=PUW35_08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08025;pseudo=true CP118132.1 Protein Homology CDS 1651711 1652301 . + 0 ID=cds-PUW35_08025;Parent=gene-PUW35_08025;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=PUW35_08025;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1652276 1653301 . + . ID=gene-PUW35_08030;Name=PUW35_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08030 CP118132.1 Protein Homology CDS 1652276 1653301 . + 0 ID=cds-WJG94434.1;Parent=gene-PUW35_08030;Dbxref=NCBI_GP:WJG94434.1;Name=WJG94434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=PUW35_08030;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WJG94434.1;transl_table=11 CP118132.1 Genbank gene 1653360 1654151 . - . ID=gene-PUW35_08035;Name=PUW35_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08035 CP118132.1 Protein Homology CDS 1653360 1654151 . - 0 ID=cds-WJG94435.1;Parent=gene-PUW35_08035;Dbxref=NCBI_GP:WJG94435.1;Name=WJG94435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=PUW35_08035;product=FadR/GntR family transcriptional regulator;protein_id=WJG94435.1;transl_table=11 CP118132.1 Genbank gene 1654197 1655288 . - . ID=gene-PUW35_08040;Name=PUW35_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08040 CP118132.1 Protein Homology CDS 1654197 1655288 . - 0 ID=cds-WJG94436.1;Parent=gene-PUW35_08040;Dbxref=NCBI_GP:WJG94436.1;Name=WJG94436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=PUW35_08040;product=linear amide C-N hydrolase;protein_id=WJG94436.1;transl_table=11 CP118132.1 Genbank gene 1655716 1656819 . + . ID=gene-PUW35_08045;Name=PUW35_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08045 CP118132.1 Protein Homology CDS 1655716 1656819 . + 0 ID=cds-WJG94437.1;Parent=gene-PUW35_08045;Dbxref=NCBI_GP:WJG94437.1;Name=WJG94437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=PUW35_08045;product=hydrogenase small subunit;protein_id=WJG94437.1;transl_table=11 CP118132.1 Genbank gene 1656822 1658624 . + . ID=gene-PUW35_08050;Name=PUW35_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08050 CP118132.1 Protein Homology CDS 1656822 1658624 . + 0 ID=cds-WJG94438.1;Parent=gene-PUW35_08050;Dbxref=NCBI_GP:WJG94438.1;Name=WJG94438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=PUW35_08050;product=nickel-dependent hydrogenase large subunit;protein_id=WJG94438.1;transl_table=11 CP118132.1 Genbank gene 1658575 1659318 . + . ID=gene-PUW35_08055;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=PUW35_08055 CP118132.1 Protein Homology CDS 1658575 1659318 . + 0 ID=cds-WJG94439.1;Parent=gene-PUW35_08055;Dbxref=NCBI_GP:WJG94439.1;Name=WJG94439.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=PUW35_08055;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WJG94439.1;transl_table=11 CP118132.1 Genbank gene 1659324 1659932 . + . ID=gene-PUW35_08060;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=PUW35_08060 CP118132.1 Protein Homology CDS 1659324 1659932 . + 0 ID=cds-WJG94440.1;Parent=gene-PUW35_08060;Dbxref=NCBI_GP:WJG94440.1;Name=WJG94440.1;Ontology_term=GO:0051604,GO:0004190,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=PUW35_08060;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WJG94440.1;transl_table=11 CP118132.1 Genbank gene 1659932 1660231 . + . ID=gene-PUW35_08065;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=PUW35_08065 CP118132.1 Protein Homology CDS 1659932 1660231 . + 0 ID=cds-WJG94441.1;Parent=gene-PUW35_08065;Dbxref=NCBI_GP:WJG94441.1;Name=WJG94441.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=PUW35_08065;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WJG94441.1;transl_table=11 CP118132.1 Genbank gene 1660228 1660638 . + . ID=gene-PUW35_08070;Name=PUW35_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08070 CP118132.1 Protein Homology CDS 1660228 1660638 . + 0 ID=cds-WJG94442.1;Parent=gene-PUW35_08070;Dbxref=NCBI_GP:WJG94442.1;Name=WJG94442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=PUW35_08070;product=hydrogenase;protein_id=WJG94442.1;transl_table=11 CP118132.1 Genbank gene 1660656 1661717 . + . ID=gene-PUW35_08075;Name=PUW35_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08075 CP118132.1 Protein Homology CDS 1660656 1661717 . + 0 ID=cds-WJG94443.1;Parent=gene-PUW35_08075;Dbxref=NCBI_GP:WJG94443.1;Name=WJG94443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=PUW35_08075;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WJG94443.1;transl_table=11 CP118132.1 Genbank gene 1661705 1662592 . + . ID=gene-PUW35_08080;Name=PUW35_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08080 CP118132.1 Protein Homology CDS 1661705 1662592 . + 0 ID=cds-WJG94444.1;Parent=gene-PUW35_08080;Dbxref=NCBI_GP:WJG94444.1;Name=WJG94444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=PUW35_08080;product=ATP/GTP-binding protein;protein_id=WJG94444.1;transl_table=11 CP118132.1 Genbank gene 1662605 1662946 . + . ID=gene-PUW35_08085;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW35_08085 CP118132.1 Protein Homology CDS 1662605 1662946 . + 0 ID=cds-WJG94445.1;Parent=gene-PUW35_08085;Dbxref=NCBI_GP:WJG94445.1;Name=WJG94445.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=PUW35_08085;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJG94445.1;transl_table=11 CP118132.1 Genbank gene 1663087 1664205 . - . ID=gene-PUW35_08090;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=PUW35_08090 CP118132.1 Protein Homology CDS 1663087 1664205 . - 0 ID=cds-WJG94446.1;Parent=gene-PUW35_08090;Dbxref=NCBI_GP:WJG94446.1;Name=WJG94446.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=PUW35_08090;product=porin OmpC;protein_id=WJG94446.1;transl_table=11 CP118132.1 Genbank gene 1664922 1665464 . + . ID=gene-PUW35_08095;Name=PUW35_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08095 CP118132.1 Protein Homology CDS 1664922 1665464 . + 0 ID=cds-WJG94447.1;Parent=gene-PUW35_08095;Dbxref=NCBI_GP:WJG94447.1;Name=WJG94447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=PUW35_08095;product=nuclear transport factor 2 family protein;protein_id=WJG94447.1;transl_table=11 CP118132.1 Genbank pseudogene 1665520 1666435 . - . ID=gene-PUW35_08100;Name=PUW35_08100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08100;pseudo=true CP118132.1 Protein Homology CDS 1665520 1666435 . - 0 ID=cds-PUW35_08100;Parent=gene-PUW35_08100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=PUW35_08100;product=bestrophin family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1666690 1667049 . - . ID=gene-PUW35_08105;Name=PUW35_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08105 CP118132.1 Protein Homology CDS 1666690 1667049 . - 0 ID=cds-WJG94448.1;Parent=gene-PUW35_08105;Dbxref=NCBI_GP:WJG94448.1;Name=WJG94448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=PUW35_08105;product=DUF4186 domain-containing protein;protein_id=WJG94448.1;transl_table=11 CP118132.1 Genbank gene 1667049 1667975 . - . ID=gene-PUW35_08110;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=PUW35_08110 CP118132.1 Protein Homology CDS 1667049 1667975 . - 0 ID=cds-WJG94449.1;Parent=gene-PUW35_08110;Dbxref=NCBI_GP:WJG94449.1;Name=WJG94449.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=PUW35_08110;product=glutaminase B;protein_id=WJG94449.1;transl_table=11 CP118132.1 Genbank gene 1668048 1669436 . - . ID=gene-PUW35_08115;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=PUW35_08115 CP118132.1 Protein Homology CDS 1668048 1669436 . - 0 ID=cds-WJG94450.1;Parent=gene-PUW35_08115;Dbxref=NCBI_GP:WJG94450.1;Name=WJG94450.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=PUW35_08115;product=succinate-semialdehyde dehydrogenase;protein_id=WJG94450.1;transl_table=11 CP118132.1 Genbank gene 1669539 1670411 . + . ID=gene-PUW35_08120;Name=PUW35_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08120 CP118132.1 Protein Homology CDS 1669539 1670411 . + 0 ID=cds-WJG94451.1;Parent=gene-PUW35_08120;Dbxref=NCBI_GP:WJG94451.1;Name=WJG94451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=PUW35_08120;product=LysR substrate-binding domain-containing protein;protein_id=WJG94451.1;transl_table=11 CP118132.1 Genbank gene 1670527 1671717 . + . ID=gene-PUW35_08125;Name=PUW35_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08125 CP118132.1 Protein Homology CDS 1670527 1671717 . + 0 ID=cds-WJG94452.1;Parent=gene-PUW35_08125;Dbxref=NCBI_GP:WJG94452.1;Name=WJG94452.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=PUW35_08125;product=sugar transporter;protein_id=WJG94452.1;transl_table=11 CP118132.1 Genbank gene 1671764 1672429 . - . ID=gene-PUW35_08130;Name=PUW35_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08130 CP118132.1 Protein Homology CDS 1671764 1672429 . - 0 ID=cds-WJG94453.1;Parent=gene-PUW35_08130;Dbxref=NCBI_GP:WJG94453.1;Name=WJG94453.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=PUW35_08130;product=MarC family NAAT transporter;protein_id=WJG94453.1;transl_table=11 CP118132.1 Genbank gene 1672688 1673122 . + . ID=gene-PUW35_08135;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=PUW35_08135 CP118132.1 Protein Homology CDS 1672688 1673122 . + 0 ID=cds-WJG94454.1;Parent=gene-PUW35_08135;Dbxref=NCBI_GP:WJG94454.1;Name=WJG94454.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=PUW35_08135;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WJG94454.1;transl_table=11 CP118132.1 Genbank gene 1673142 1673525 . + . ID=gene-PUW35_08140;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=PUW35_08140 CP118132.1 Protein Homology CDS 1673142 1673525 . + 0 ID=cds-WJG94455.1;Parent=gene-PUW35_08140;Dbxref=NCBI_GP:WJG94455.1;Name=WJG94455.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=PUW35_08140;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WJG94455.1;transl_table=11 CP118132.1 Genbank gene 1673554 1673769 . + . ID=gene-PUW35_08145;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=PUW35_08145 CP118132.1 Protein Homology CDS 1673554 1673769 . + 0 ID=cds-WJG94456.1;Parent=gene-PUW35_08145;Dbxref=NCBI_GP:WJG94456.1;Name=WJG94456.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=PUW35_08145;product=multiple antibiotic resistance protein MarB;protein_id=WJG94456.1;transl_table=11 CP118132.1 Genbank gene 1673888 1674790 . - . ID=gene-PUW35_08150;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=PUW35_08150 CP118132.1 Protein Homology CDS 1673888 1674790 . - 0 ID=cds-WJG94457.1;Parent=gene-PUW35_08150;Dbxref=NCBI_GP:WJG94457.1;Name=WJG94457.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=PUW35_08150;product=O-acetylserine/cysteine exporter;protein_id=WJG94457.1;transl_table=11 CP118132.1 Genbank gene 1675018 1676208 . + . ID=gene-PUW35_08155;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=PUW35_08155 CP118132.1 Protein Homology CDS 1675018 1676208 . + 0 ID=cds-WJG94458.1;Parent=gene-PUW35_08155;Dbxref=NCBI_GP:WJG94458.1;Name=WJG94458.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=PUW35_08155;product=efflux MFS transporter YdeE;protein_id=WJG94458.1;transl_table=11 CP118132.1 Genbank gene 1676456 1676551 . + . ID=gene-PUW35_08160;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=PUW35_08160 CP118132.1 Protein Homology CDS 1676456 1676551 . + 0 ID=cds-WJG94459.1;Parent=gene-PUW35_08160;Dbxref=NCBI_GP:WJG94459.1;Name=WJG94459.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=PUW35_08160;product=protein MgtS;protein_id=WJG94459.1;transl_table=11 CP118132.1 Genbank gene 1676899 1677291 . - . ID=gene-PUW35_08165;Name=PUW35_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08165 CP118132.1 Protein Homology CDS 1676899 1677291 . - 0 ID=cds-WJG94460.1;Parent=gene-PUW35_08165;Dbxref=NCBI_GP:WJG94460.1;Name=WJG94460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=PUW35_08165;product=YdeI family stress tolerance OB fold protein;protein_id=WJG94460.1;transl_table=11 CP118132.1 Genbank gene 1677719 1678246 . + . ID=gene-PUW35_08170;Name=PUW35_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08170 CP118132.1 Protein Homology CDS 1677719 1678246 . + 0 ID=cds-WJG94461.1;Parent=gene-PUW35_08170;Dbxref=NCBI_GP:WJG94461.1;Name=WJG94461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=PUW35_08170;product=2-oxo-tetronate isomerase;protein_id=WJG94461.1;transl_table=11 CP118132.1 Genbank gene 1678366 1678548 . - . ID=gene-PUW35_08175;Name=PUW35_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08175 CP118132.1 Protein Homology CDS 1678366 1678548 . - 0 ID=cds-WJG94462.1;Parent=gene-PUW35_08175;Dbxref=NCBI_GP:WJG94462.1;Name=WJG94462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=PUW35_08175;product=general stress protein;protein_id=WJG94462.1;transl_table=11 CP118132.1 Genbank pseudogene 1678892 1680933 . - . ID=gene-PUW35_08180;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=pseudogene;locus_tag=PUW35_08180;pseudo=true CP118132.1 Protein Homology CDS 1678892 1680933 . - 0 ID=cds-PUW35_08180;Parent=gene-PUW35_08180;Note=frameshifted;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=PUW35_08180;product=peptidyl-dipeptidase Dcp;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1681072 1681818 . + . ID=gene-PUW35_08185;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=PUW35_08185 CP118132.1 Protein Homology CDS 1681072 1681818 . + 0 ID=cds-WJG94463.1;Parent=gene-PUW35_08185;Dbxref=NCBI_GP:WJG94463.1;Name=WJG94463.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=PUW35_08185;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WJG94463.1;transl_table=11 CP118132.1 Genbank gene 1681948 1682634 . + . ID=gene-PUW35_08190;Name=PUW35_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08190 CP118132.1 Protein Homology CDS 1681948 1682634 . + 0 ID=cds-WJG94464.1;Parent=gene-PUW35_08190;Dbxref=NCBI_GP:WJG94464.1;Name=WJG94464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=PUW35_08190;product=GntR family transcriptional regulator;protein_id=WJG94464.1;transl_table=11 CP118132.1 Genbank gene 1682816 1683019 . + . ID=gene-PUW35_08195;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=PUW35_08195 CP118132.1 Protein Homology CDS 1682816 1683019 . + 0 ID=cds-WJG94465.1;Parent=gene-PUW35_08195;Dbxref=NCBI_GP:WJG94465.1;Name=WJG94465.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=PUW35_08195;product=putative selenium delivery protein YdfZ;protein_id=WJG94465.1;transl_table=11 CP118132.1 Genbank gene 1683086 1684015 . - . ID=gene-PUW35_08200;Name=PUW35_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08200 CP118132.1 Protein Homology CDS 1683086 1684015 . - 0 ID=cds-WJG95057.1;Parent=gene-PUW35_08200;Dbxref=NCBI_GP:WJG95057.1;Name=WJG95057.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019736.2;locus_tag=PUW35_08200;product=mannitol dehydrogenase family protein;protein_id=WJG95057.1;transl_table=11 CP118132.1 Genbank gene 1684044 1684553 . - . ID=gene-PUW35_08205;Name=PUW35_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08205 CP118132.1 Protein Homology CDS 1684044 1684553 . - 0 ID=cds-WJG94466.1;Parent=gene-PUW35_08205;Dbxref=NCBI_GP:WJG94466.1;Name=WJG94466.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013403.2;locus_tag=PUW35_08205;product=hypothetical protein;protein_id=WJG94466.1;transl_table=11 CP118132.1 Genbank pseudogene 1684697 1686076 . - . ID=gene-PUW35_08210;Name=PUW35_08210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08210;pseudo=true CP118132.1 Protein Homology CDS 1684697 1686076 . - 0 ID=cds-PUW35_08210;Parent=gene-PUW35_08210;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=PUW35_08210;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1686130 1687149 . - . ID=gene-PUW35_08215;Name=PUW35_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08215 CP118132.1 Protein Homology CDS 1686130 1687149 . - 0 ID=cds-WJG94467.1;Parent=gene-PUW35_08215;Dbxref=NCBI_GP:WJG94467.1;Name=WJG94467.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=PUW35_08215;product=Zn-dependent oxidoreductase;protein_id=WJG94467.1;transl_table=11 CP118132.1 Genbank gene 1687160 1688374 . - . ID=gene-PUW35_08220;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=PUW35_08220 CP118132.1 Protein Homology CDS 1687160 1688374 . - 0 ID=cds-WJG94468.1;Parent=gene-PUW35_08220;Dbxref=NCBI_GP:WJG94468.1;Name=WJG94468.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=PUW35_08220;product=starvation-sensing protein RspA;protein_id=WJG94468.1;transl_table=11 CP118132.1 Genbank gene 1688496 1688822 . - . ID=gene-PUW35_08225;Name=PUW35_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08225 CP118132.1 Protein Homology CDS 1688496 1688822 . - 0 ID=cds-WJG94469.1;Parent=gene-PUW35_08225;Dbxref=NCBI_GP:WJG94469.1;Name=WJG94469.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=PUW35_08225;product=YnfA family protein;protein_id=WJG94469.1;transl_table=11 CP118132.1 Genbank gene 1688974 1689315 . + . ID=gene-PUW35_08230;Name=PUW35_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08230 CP118132.1 Protein Homology CDS 1688974 1689315 . + 0 ID=cds-WJG94470.1;Parent=gene-PUW35_08230;Dbxref=NCBI_GP:WJG94470.1;Name=WJG94470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=PUW35_08230;product=DUF1283 family protein;protein_id=WJG94470.1;transl_table=11 CP118132.1 Genbank gene 1689351 1689911 . + . ID=gene-PUW35_08235;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=PUW35_08235 CP118132.1 Protein Homology CDS 1689351 1689911 . + 0 ID=cds-WJG94471.1;Parent=gene-PUW35_08235;Dbxref=NCBI_GP:WJG94471.1;Name=WJG94471.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=PUW35_08235;product=spermidine N1-acetyltransferase;protein_id=WJG94471.1;transl_table=11 CP118132.1 Genbank gene 1689952 1690662 . - . ID=gene-PUW35_08240;Name=PUW35_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08240 CP118132.1 Protein Homology CDS 1689952 1690662 . - 0 ID=cds-WJG94472.1;Parent=gene-PUW35_08240;Dbxref=NCBI_GP:WJG94472.1;Name=WJG94472.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=PUW35_08240;product=YnfC family lipoprotein;protein_id=WJG94472.1;transl_table=11 CP118132.1 Genbank gene 1690766 1691074 . + . ID=gene-PUW35_08245;Name=PUW35_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08245 CP118132.1 Protein Homology CDS 1690766 1691074 . + 0 ID=cds-WJG94473.1;Parent=gene-PUW35_08245;Dbxref=NCBI_GP:WJG94473.1;Name=WJG94473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=PUW35_08245;product=DUF1161 domain-containing protein;protein_id=WJG94473.1;transl_table=11 CP118132.1 Genbank pseudogene 1691228 1693416 . + . ID=gene-PUW35_08250;Name=PUW35_08250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08250;pseudo=true CP118132.1 Protein Homology CDS 1691228 1693416 . + 0 ID=cds-PUW35_08250;Parent=gene-PUW35_08250;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460459.1;locus_tag=PUW35_08250;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1693515 1695950 . + . ID=gene-PUW35_08255;Name=PUW35_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08255 CP118132.1 Protein Homology CDS 1693515 1695950 . + 0 ID=cds-WJG94474.1;Parent=gene-PUW35_08255;Dbxref=NCBI_GP:WJG94474.1;Name=WJG94474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=PUW35_08255;product=dimethyl sulfoxide reductase subunit A;protein_id=WJG94474.1;transl_table=11 CP118132.1 Genbank pseudogene 1695961 1696577 . + . ID=gene-PUW35_08260;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=PUW35_08260;pseudo=true CP118132.1 Protein Homology CDS 1695961 1696577 . + 0 ID=cds-PUW35_08260;Parent=gene-PUW35_08260;Note=frameshifted;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PUW35_08260;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1696579 1697436 . + . ID=gene-PUW35_08265;Name=PUW35_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08265 CP118132.1 Protein Homology CDS 1696579 1697436 . + 0 ID=cds-WJG94475.1;Parent=gene-PUW35_08265;Dbxref=NCBI_GP:WJG94475.1;Name=WJG94475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=PUW35_08265;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJG94475.1;transl_table=11 CP118132.1 Genbank gene 1697479 1698093 . + . ID=gene-PUW35_08270;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=PUW35_08270 CP118132.1 Protein Homology CDS 1697479 1698093 . + 0 ID=cds-WJG94476.1;Parent=gene-PUW35_08270;Dbxref=NCBI_GP:WJG94476.1;Name=WJG94476.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=PUW35_08270;product=Tat proofreading chaperone DmsD;protein_id=WJG94476.1;transl_table=11 CP118132.1 Genbank gene 1698398 1699075 . + . ID=gene-PUW35_08275;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PUW35_08275 CP118132.1 Protein Homology CDS 1698398 1699075 . + 0 ID=cds-WJG94477.1;Parent=gene-PUW35_08275;Dbxref=NCBI_GP:WJG94477.1;Name=WJG94477.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=PUW35_08275;product=osmoprotectant ABC transporter permease OsmY;protein_id=WJG94477.1;transl_table=11 CP118132.1 Genbank gene 1699137 1700039 . + . ID=gene-PUW35_08280;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=PUW35_08280 CP118132.1 Protein Homology CDS 1699137 1700039 . + 0 ID=cds-WJG94478.1;Parent=gene-PUW35_08280;Dbxref=NCBI_GP:WJG94478.1;Name=WJG94478.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=PUW35_08280;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WJG94478.1;transl_table=11 CP118132.1 Genbank gene 1700049 1700696 . + . ID=gene-PUW35_08285;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=PUW35_08285 CP118132.1 Protein Homology CDS 1700049 1700696 . + 0 ID=cds-WJG94479.1;Parent=gene-PUW35_08285;Dbxref=NCBI_GP:WJG94479.1;Name=WJG94479.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=PUW35_08285;product=osmoprotectant ABC transporter permease OsmW;protein_id=WJG94479.1;transl_table=11 CP118132.1 Genbank gene 1700696 1701844 . + . ID=gene-PUW35_08290;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=PUW35_08290 CP118132.1 Protein Homology CDS 1700696 1701844 . + 0 ID=cds-WJG94480.1;Parent=gene-PUW35_08290;Dbxref=NCBI_GP:WJG94480.1;Name=WJG94480.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=PUW35_08290;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WJG94480.1;transl_table=11 CP118132.1 Genbank pseudogene 1701980 1703268 . + . ID=gene-PUW35_08295;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=pseudogene;locus_tag=PUW35_08295;pseudo=true CP118132.1 Protein Homology CDS 1701980 1703268 . + 0 ID=cds-PUW35_08295;Parent=gene-PUW35_08295;Note=frameshifted;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=PUW35_08295;product=voltage-gated ClC-type chloride channel ClcB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1703224 1703919 . - . ID=gene-PUW35_08300;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PUW35_08300 CP118132.1 Protein Homology CDS 1703224 1703919 . - 0 ID=cds-WJG94481.1;Parent=gene-PUW35_08300;Dbxref=NCBI_GP:WJG94481.1;Name=WJG94481.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=PUW35_08300;product=dethiobiotin synthase;protein_id=WJG94481.1;transl_table=11 CP118132.1 Genbank gene 1704045 1705265 . - . ID=gene-PUW35_08305;Name=PUW35_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08305 CP118132.1 Protein Homology CDS 1704045 1705265 . - 0 ID=cds-WJG94482.1;Parent=gene-PUW35_08305;Dbxref=NCBI_GP:WJG94482.1;Name=WJG94482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=PUW35_08305;product=ROK family transcriptional regulator;protein_id=WJG94482.1;transl_table=11 CP118132.1 Genbank gene 1705393 1706292 . - . ID=gene-PUW35_08310;Name=PUW35_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08310 CP118132.1 Protein Homology CDS 1705393 1706292 . - 0 ID=cds-WJG94483.1;Parent=gene-PUW35_08310;Dbxref=NCBI_GP:WJG94483.1;Name=WJG94483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=PUW35_08310;product=LysR family transcriptional regulator;protein_id=WJG94483.1;transl_table=11 CP118132.1 Genbank pseudogene 1706412 1707665 . + . ID=gene-PUW35_08315;Name=PUW35_08315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08315;pseudo=true CP118132.1 Protein Homology CDS 1706412 1707665 . + 0 ID=cds-PUW35_08315;Parent=gene-PUW35_08315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=PUW35_08315;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1707732 1707824 . - . ID=gene-PUW35_08320;Name=PUW35_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08320 CP118132.1 Protein Homology CDS 1707732 1707824 . - 0 ID=cds-WJG94484.1;Parent=gene-PUW35_08320;Dbxref=NCBI_GP:WJG94484.1;Name=WJG94484.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=PUW35_08320;product=KPN_01571 family protein;protein_id=WJG94484.1;transl_table=11 CP118132.1 Genbank gene 1708060 1708308 . + . ID=gene-PUW35_08325;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=PUW35_08325 CP118132.1 Protein Homology CDS 1708060 1708308 . + 0 ID=cds-WJG95058.1;Parent=gene-PUW35_08325;Dbxref=NCBI_GP:WJG95058.1;Name=WJG95058.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=PUW35_08325;product=acid resistance repetitive basic protein Asr;protein_id=WJG95058.1;transl_table=11 CP118132.1 Genbank pseudogene 1708576 1708998 . + . ID=gene-PUW35_08330;Name=PUW35_08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08330;pseudo=true CP118132.1 Protein Homology CDS 1708576 1708998 . + 0 ID=cds-PUW35_08330;Parent=gene-PUW35_08330;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=PUW35_08330;product=serine protease;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1709199 1710233 . + . ID=gene-PUW35_08335;Name=PUW35_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08335 CP118132.1 Protein Homology CDS 1709199 1710233 . + 0 ID=cds-WJG94485.1;Parent=gene-PUW35_08335;Dbxref=NCBI_GP:WJG94485.1;Name=WJG94485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=PUW35_08335;product=AI-2E family transporter;protein_id=WJG94485.1;transl_table=11 CP118132.1 Genbank gene 1710408 1711796 . - . ID=gene-PUW35_08340;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=PUW35_08340 CP118132.1 Protein Homology CDS 1710408 1711796 . - 0 ID=cds-WJG94486.1;Parent=gene-PUW35_08340;Dbxref=NCBI_GP:WJG94486.1;Name=WJG94486.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=PUW35_08340;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WJG94486.1;transl_table=11 CP118132.1 Genbank gene 1711807 1713336 . - . ID=gene-PUW35_08345;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=PUW35_08345 CP118132.1 Protein Homology CDS 1711807 1713336 . - 0 ID=cds-WJG94487.1;Parent=gene-PUW35_08345;Dbxref=NCBI_GP:WJG94487.1;Name=WJG94487.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=PUW35_08345;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WJG94487.1;transl_table=11 CP118132.1 Genbank pseudogene 1713787 1713866 . + . ID=gene-PUW35_08350;Name=PUW35_08350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08350;pseudo=true CP118132.1 Protein Homology CDS 1713787 1713866 . + 0 ID=cds-PUW35_08350;Parent=gene-PUW35_08350;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226730.1;locus_tag=PUW35_08350;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1713863 1714807 . + . ID=gene-PUW35_08355;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=PUW35_08355 CP118132.1 Protein Homology CDS 1713863 1714807 . + 0 ID=cds-WJG94488.1;Parent=gene-PUW35_08355;Dbxref=NCBI_GP:WJG94488.1;Name=WJG94488.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=PUW35_08355;product=DUF1471 family protein YdgH;protein_id=WJG94488.1;transl_table=11 CP118132.1 Genbank gene 1715106 1716488 . + . ID=gene-PUW35_08360;Name=PUW35_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08360 CP118132.1 Protein Homology CDS 1715106 1716488 . + 0 ID=cds-WJG94489.1;Parent=gene-PUW35_08360;Dbxref=NCBI_GP:WJG94489.1;Name=WJG94489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=PUW35_08360;product=amino acid permease;protein_id=WJG94489.1;transl_table=11 CP118132.1 Genbank gene 1716550 1716885 . - . ID=gene-PUW35_08365;Name=PUW35_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08365 CP118132.1 Protein Homology CDS 1716550 1716885 . - 0 ID=cds-WJG94490.1;Parent=gene-PUW35_08365;Dbxref=NCBI_GP:WJG94490.1;Name=WJG94490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=PUW35_08365;product=GlpM family protein;protein_id=WJG94490.1;transl_table=11 CP118132.1 Genbank gene 1717012 1717743 . + . ID=gene-PUW35_08370;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=PUW35_08370 CP118132.1 Protein Homology CDS 1717012 1717743 . + 0 ID=cds-WJG94491.1;Parent=gene-PUW35_08370;Dbxref=NCBI_GP:WJG94491.1;Name=WJG94491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=PUW35_08370;product=two-component system response regulator RstA;protein_id=WJG94491.1;transl_table=11 CP118132.1 Genbank gene 1718223 1719368 . + . ID=gene-PUW35_08375;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=PUW35_08375 CP118132.1 Protein Homology CDS 1718223 1719368 . + 0 ID=cds-WJG94492.1;Parent=gene-PUW35_08375;Dbxref=NCBI_GP:WJG94492.1;Name=WJG94492.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=PUW35_08375;product=porin OmpS2;protein_id=WJG94492.1;transl_table=11 CP118132.1 Genbank pseudogene 1719521 1721227 . + . ID=gene-PUW35_08380;Name=PUW35_08380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08380;pseudo=true CP118132.1 Protein Homology CDS 1719521 1721227 . + 0 ID=cds-PUW35_08380;Parent=gene-PUW35_08380;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=PUW35_08380;product=amidohydrolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1721338 1722639 . + . ID=gene-PUW35_08385;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=PUW35_08385 CP118132.1 Protein Homology CDS 1721338 1722639 . + 0 ID=cds-WJG94493.1;Parent=gene-PUW35_08385;Dbxref=NCBI_GP:WJG94493.1;Name=WJG94493.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=PUW35_08385;product=two-component system sensor histidine kinase RstB;protein_id=WJG94493.1;transl_table=11 CP118132.1 Genbank gene 1722715 1723644 . + . ID=gene-PUW35_08390;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=PUW35_08390 CP118132.1 Protein Homology CDS 1722715 1723644 . + 0 ID=cds-WJG94494.1;Parent=gene-PUW35_08390;Dbxref=NCBI_GP:WJG94494.1;Name=WJG94494.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=PUW35_08390;product=DNA replication terminus site-binding protein;protein_id=WJG94494.1;transl_table=11 CP118132.1 Genbank gene 1723641 1725044 . - . ID=gene-PUW35_08395;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=PUW35_08395 CP118132.1 Protein Homology CDS 1723641 1725044 . - 0 ID=cds-WJG94495.1;Parent=gene-PUW35_08395;Dbxref=NCBI_GP:WJG94495.1;Name=WJG94495.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=PUW35_08395;product=class II fumarate hydratase;protein_id=WJG94495.1;transl_table=11 CP118132.1 Genbank gene 1725212 1726858 . - . ID=gene-PUW35_08400;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=PUW35_08400 CP118132.1 Protein Homology CDS 1725212 1726858 . - 0 ID=cds-WJG94496.1;Parent=gene-PUW35_08400;Dbxref=NCBI_GP:WJG94496.1;Name=WJG94496.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=PUW35_08400;product=class I fumarate hydratase;protein_id=WJG94496.1;transl_table=11 CP118132.1 Genbank gene 1727058 1728233 . + . ID=gene-PUW35_08405;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=PUW35_08405 CP118132.1 Protein Homology CDS 1727058 1728233 . + 0 ID=cds-WJG94497.1;Parent=gene-PUW35_08405;Dbxref=NCBI_GP:WJG94497.1;Name=WJG94497.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=PUW35_08405;product=mannose-6-phosphate isomerase;protein_id=WJG94497.1;transl_table=11 CP118132.1 Genbank gene 1728336 1729844 . + . ID=gene-PUW35_08410;Name=PUW35_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08410 CP118132.1 Protein Homology CDS 1728336 1729844 . + 0 ID=cds-WJG94498.1;Parent=gene-PUW35_08410;Dbxref=NCBI_GP:WJG94498.1;Name=WJG94498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=PUW35_08410;product=YdgA family protein;protein_id=WJG94498.1;transl_table=11 CP118132.1 Genbank pseudogene 1729963 1730183 . + . ID=gene-PUW35_08415;Name=PUW35_08415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08415;pseudo=true CP118132.1 Protein Homology CDS 1729963 1730183 . + 0 ID=cds-PUW35_08415;Parent=gene-PUW35_08415;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=PUW35_08415;product=glucose PTS transporter subunit EIIB;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1730193 1730324 . + . ID=gene-PUW35_08420;Name=PUW35_08420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08420;pseudo=true CP118132.1 Protein Homology CDS 1730193 1730324 . + 0 ID=cds-PUW35_08420;Parent=gene-PUW35_08420;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=PUW35_08420;product=transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1730548 1731549 . + . ID=gene-PUW35_08425;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=PUW35_08425 CP118132.1 Protein Homology CDS 1730548 1731549 . + 0 ID=cds-WJG94499.1;Parent=gene-PUW35_08425;Dbxref=NCBI_GP:WJG94499.1;Name=WJG94499.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=PUW35_08425;product=adenosine deaminase;protein_id=WJG94499.1;transl_table=11 CP118132.1 Genbank gene 1731624 1732664 . - . ID=gene-PUW35_08430;Name=PUW35_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08430 CP118132.1 Protein Homology CDS 1731624 1732664 . - 0 ID=cds-WJG94500.1;Parent=gene-PUW35_08430;Dbxref=NCBI_GP:WJG94500.1;Name=WJG94500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=PUW35_08430;product=oxidoreductase;protein_id=WJG94500.1;transl_table=11 CP118132.1 Genbank gene 1732872 1732997 . + . ID=gene-PUW35_08435;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=PUW35_08435 CP118132.1 Protein Homology CDS 1732872 1732997 . + 0 ID=cds-WJG94501.1;Parent=gene-PUW35_08435;Dbxref=NCBI_GP:WJG94501.1;Name=WJG94501.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=PUW35_08435;product=division septum protein Blr;protein_id=WJG94501.1;transl_table=11 CP118132.1 Genbank gene 1733295 1733510 . + . ID=gene-PUW35_08440;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=PUW35_08440 CP118132.1 Protein Homology CDS 1733295 1733510 . + 0 ID=cds-WJG94502.1;Parent=gene-PUW35_08440;Dbxref=NCBI_GP:WJG94502.1;Name=WJG94502.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=PUW35_08440;product=transcription modulator YdgT;protein_id=WJG94502.1;transl_table=11 CP118132.1 Genbank gene 1733599 1734039 . + . ID=gene-PUW35_08445;Name=PUW35_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08445 CP118132.1 Protein Homology CDS 1733599 1734039 . + 0 ID=cds-WJG94503.1;Parent=gene-PUW35_08445;Dbxref=NCBI_GP:WJG94503.1;Name=WJG94503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=PUW35_08445;product=DUF2569 domain-containing protein;protein_id=WJG94503.1;transl_table=11 CP118132.1 Genbank gene 1734116 1734697 . + . ID=gene-PUW35_08450;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=PUW35_08450 CP118132.1 Protein Homology CDS 1734116 1734697 . + 0 ID=cds-WJG94504.1;Parent=gene-PUW35_08450;Dbxref=NCBI_GP:WJG94504.1;Name=WJG94504.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=PUW35_08450;product=electron transport complex subunit RsxA;protein_id=WJG94504.1;transl_table=11 CP118132.1 Genbank gene 1734697 1735275 . + . ID=gene-PUW35_08455;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=PUW35_08455 CP118132.1 Protein Homology CDS 1734697 1735275 . + 0 ID=cds-WJG94505.1;Parent=gene-PUW35_08455;Dbxref=NCBI_GP:WJG94505.1;Name=WJG94505.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=PUW35_08455;product=electron transport complex subunit RsxB;protein_id=WJG94505.1;transl_table=11 CP118132.1 Genbank gene 1735268 1737289 . + . ID=gene-PUW35_08460;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=PUW35_08460 CP118132.1 Protein Homology CDS 1735268 1737289 . + 0 ID=cds-WJG94506.1;Parent=gene-PUW35_08460;Dbxref=NCBI_GP:WJG94506.1;Name=WJG94506.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=PUW35_08460;product=electron transport complex subunit RsxC;protein_id=WJG94506.1;transl_table=11 CP118132.1 Genbank gene 1737290 1738348 . + . ID=gene-PUW35_08465;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=PUW35_08465 CP118132.1 Protein Homology CDS 1737290 1738348 . + 0 ID=cds-WJG94507.1;Parent=gene-PUW35_08465;Dbxref=NCBI_GP:WJG94507.1;Name=WJG94507.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=PUW35_08465;product=electron transport complex subunit RsxD;protein_id=WJG94507.1;transl_table=11 CP118132.1 Genbank gene 1738352 1738972 . + . ID=gene-PUW35_08470;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=PUW35_08470 CP118132.1 Protein Homology CDS 1738352 1738972 . + 0 ID=cds-WJG94508.1;Parent=gene-PUW35_08470;Dbxref=NCBI_GP:WJG94508.1;Name=WJG94508.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=PUW35_08470;product=electron transport complex subunit RsxG;protein_id=WJG94508.1;transl_table=11 CP118132.1 Genbank gene 1738975 1739667 . + . ID=gene-PUW35_08475;Name=PUW35_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08475 CP118132.1 Protein Homology CDS 1738975 1739667 . + 0 ID=cds-WJG94509.1;Parent=gene-PUW35_08475;Dbxref=NCBI_GP:WJG94509.1;Name=WJG94509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=PUW35_08475;product=electron transport complex subunit E;protein_id=WJG94509.1;transl_table=11 CP118132.1 Genbank gene 1739667 1740302 . + . ID=gene-PUW35_08480;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=PUW35_08480 CP118132.1 Protein Homology CDS 1739667 1740302 . + 0 ID=cds-WJG94510.1;Parent=gene-PUW35_08480;Dbxref=NCBI_GP:WJG94510.1;Name=WJG94510.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=PUW35_08480;product=endonuclease III;protein_id=WJG94510.1;transl_table=11 CP118132.1 Genbank gene 1740903 1742408 . + . ID=gene-PUW35_08485;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=PUW35_08485 CP118132.1 Protein Homology CDS 1740903 1742408 . + 0 ID=cds-WJG94511.1;Parent=gene-PUW35_08485;Dbxref=NCBI_GP:WJG94511.1;Name=WJG94511.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=PUW35_08485;product=dipeptide/tripeptide permease DtpA;protein_id=WJG94511.1;transl_table=11 CP118132.1 Genbank gene 1742511 1743116 . + . ID=gene-PUW35_08490;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=PUW35_08490 CP118132.1 Protein Homology CDS 1742511 1743116 . + 0 ID=cds-WJG94512.1;Parent=gene-PUW35_08490;Dbxref=NCBI_GP:WJG94512.1;Name=WJG94512.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=PUW35_08490;product=glutathione transferase GstA;protein_id=WJG94512.1;transl_table=11 CP118132.1 Genbank gene 1743175 1744035 . - . ID=gene-PUW35_08495;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=PUW35_08495 CP118132.1 Protein Homology CDS 1743175 1744035 . - 0 ID=cds-WJG94513.1;Parent=gene-PUW35_08495;Dbxref=NCBI_GP:WJG94513.1;Name=WJG94513.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=PUW35_08495;product=pyridoxal kinase PdxY;protein_id=WJG94513.1;transl_table=11 CP118132.1 Genbank gene 1744095 1745369 . - . ID=gene-PUW35_08500;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=PUW35_08500 CP118132.1 Protein Homology CDS 1744095 1745369 . - 0 ID=cds-WJG94514.1;Parent=gene-PUW35_08500;Dbxref=NCBI_GP:WJG94514.1;Name=WJG94514.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=PUW35_08500;product=tyrosine--tRNA ligase;protein_id=WJG94514.1;transl_table=11 CP118132.1 Genbank gene 1745496 1746152 . - . ID=gene-PUW35_08505;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=PUW35_08505 CP118132.1 Protein Homology CDS 1745496 1746152 . - 0 ID=cds-WJG94515.1;Parent=gene-PUW35_08505;Dbxref=NCBI_GP:WJG94515.1;Name=WJG94515.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=PUW35_08505;product=pyridoxamine 5'-phosphate oxidase;protein_id=WJG94515.1;transl_table=11 CP118132.1 Genbank gene 1746211 1746540 . - . ID=gene-PUW35_08510;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=PUW35_08510 CP118132.1 Protein Homology CDS 1746211 1746540 . - 0 ID=cds-WJG94516.1;Parent=gene-PUW35_08510;Dbxref=NCBI_GP:WJG94516.1;Name=WJG94516.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=PUW35_08510;product=C-type lysozyme inhibitor;protein_id=WJG94516.1;transl_table=11 CP118132.1 Genbank gene 1746628 1747749 . - . ID=gene-PUW35_08515;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=PUW35_08515 CP118132.1 Protein Homology CDS 1746628 1747749 . - 0 ID=cds-WJG94517.1;Parent=gene-PUW35_08515;Dbxref=NCBI_GP:WJG94517.1;Name=WJG94517.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=PUW35_08515;product=anhydro-N-acetylmuramic acid kinase;protein_id=WJG94517.1;transl_table=11 CP118132.1 Genbank gene 1748021 1748488 . + . ID=gene-PUW35_08520;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=PUW35_08520 CP118132.1 Protein Homology CDS 1748021 1748488 . + 0 ID=cds-WJG94518.1;Parent=gene-PUW35_08520;Dbxref=NCBI_GP:WJG94518.1;Name=WJG94518.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=PUW35_08520;product=outer membrane lipoprotein SlyB;protein_id=WJG94518.1;transl_table=11 CP118132.1 Genbank gene 1748536 1748976 . - . ID=gene-PUW35_08525;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=PUW35_08525 CP118132.1 Protein Homology CDS 1748536 1748976 . - 0 ID=cds-WJG94519.1;Parent=gene-PUW35_08525;Dbxref=NCBI_GP:WJG94519.1;Name=WJG94519.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=PUW35_08525;product=transcriptional regulator SlyA;protein_id=WJG94519.1;transl_table=11 CP118132.1 Genbank gene 1749171 1749407 . + . ID=gene-PUW35_08530;Name=PUW35_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08530 CP118132.1 Protein Homology CDS 1749171 1749407 . + 0 ID=cds-WJG94520.1;Parent=gene-PUW35_08530;Dbxref=NCBI_GP:WJG94520.1;Name=WJG94520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=PUW35_08530;product=DUF1656 domain-containing protein;protein_id=WJG94520.1;transl_table=11 CP118132.1 Genbank gene 1749410 1750270 . + . ID=gene-PUW35_08535;Name=PUW35_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08535 CP118132.1 Protein Homology CDS 1749410 1750270 . + 0 ID=cds-WJG94521.1;Parent=gene-PUW35_08535;Dbxref=NCBI_GP:WJG94521.1;Name=WJG94521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=PUW35_08535;product=HlyD family secretion protein;protein_id=WJG94521.1;transl_table=11 CP118132.1 Genbank gene 1750270 1752309 . + . ID=gene-PUW35_08540;Name=PUW35_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08540 CP118132.1 Protein Homology CDS 1750270 1752309 . + 0 ID=cds-WJG94522.1;Parent=gene-PUW35_08540;Dbxref=NCBI_GP:WJG94522.1;Name=WJG94522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=PUW35_08540;product=FUSC family protein;protein_id=WJG94522.1;transl_table=11 CP118132.1 Genbank gene 1752285 1752806 . - . ID=gene-PUW35_08545;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=PUW35_08545 CP118132.1 Protein Homology CDS 1752285 1752806 . - 0 ID=cds-WJG94523.1;Parent=gene-PUW35_08545;Dbxref=NCBI_GP:WJG94523.1;Name=WJG94523.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=PUW35_08545;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WJG94523.1;transl_table=11 CP118132.1 Genbank pseudogene 1752886 1753782 . - . ID=gene-PUW35_08550;Name=PUW35_08550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08550;pseudo=true CP118132.1 Protein Homology CDS 1752886 1753782 . - 0 ID=cds-PUW35_08550;Parent=gene-PUW35_08550;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=PUW35_08550;product=aldo/keto reductase family oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1753833 1754072 . - . ID=gene-PUW35_08555;Name=PUW35_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08555 CP118132.1 Protein Homology CDS 1753833 1754072 . - 0 ID=cds-WJG94524.1;Parent=gene-PUW35_08555;Dbxref=NCBI_GP:WJG94524.1;Name=WJG94524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=PUW35_08555;product=DUF1289 domain-containing protein;protein_id=WJG94524.1;transl_table=11 CP118132.1 Genbank gene 1754175 1754774 . + . ID=gene-PUW35_08560;Name=PUW35_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08560 CP118132.1 Protein Homology CDS 1754175 1754774 . + 0 ID=cds-WJG94525.1;Parent=gene-PUW35_08560;Dbxref=NCBI_GP:WJG94525.1;Name=WJG94525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=PUW35_08560;product=TetR/AcrR family transcriptional regulator;protein_id=WJG94525.1;transl_table=11 CP118132.1 Genbank pseudogene 1754833 1755929 . + . ID=gene-PUW35_08565;Name=PUW35_08565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08565;pseudo=true CP118132.1 Protein Homology CDS 1754833 1755929 . + 0 ID=cds-PUW35_08565;Parent=gene-PUW35_08565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=PUW35_08565;product=alkene reductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1755998 1756405 . + . ID=gene-PUW35_08570;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=PUW35_08570 CP118132.1 Protein Homology CDS 1755998 1756405 . + 0 ID=cds-WJG94526.1;Parent=gene-PUW35_08570;Dbxref=NCBI_GP:WJG94526.1;Name=WJG94526.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=PUW35_08570;product=lactoylglutathione lyase;protein_id=WJG94526.1;transl_table=11 CP118132.1 Genbank pseudogene 1756506 1757152 . + . ID=gene-PUW35_08575;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=pseudogene;locus_tag=PUW35_08575;pseudo=true CP118132.1 Protein Homology CDS 1756506 1757152 . + 0 ID=cds-PUW35_08575;Parent=gene-PUW35_08575;Note=frameshifted;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=PUW35_08575;product=ribonuclease T;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1757230 1757577 . - . ID=gene-PUW35_08580;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=PUW35_08580 CP118132.1 Protein Homology CDS 1757230 1757577 . - 0 ID=cds-WJG94527.1;Parent=gene-PUW35_08580;Dbxref=NCBI_GP:WJG94527.1;Name=WJG94527.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=PUW35_08580;product=monothiol glutaredoxin 4;protein_id=WJG94527.1;transl_table=11 CP118132.1 Genbank gene 1757913 1758734 . + . ID=gene-PUW35_08585;Name=PUW35_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08585 CP118132.1 Protein Homology CDS 1757913 1758734 . + 0 ID=cds-WJG94528.1;Parent=gene-PUW35_08585;Dbxref=NCBI_GP:WJG94528.1;Name=WJG94528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=PUW35_08585;product=C40 family peptidase;protein_id=WJG94528.1;transl_table=11 CP118132.1 Genbank gene 1758861 1759442 . + . ID=gene-PUW35_08590;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=PUW35_08590 CP118132.1 Protein Homology CDS 1758861 1759442 . + 0 ID=cds-WJG94529.1;Parent=gene-PUW35_08590;Dbxref=NCBI_GP:WJG94529.1;Name=WJG94529.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=PUW35_08590;product=superoxide dismutase [Fe];protein_id=WJG94529.1;transl_table=11 CP118132.1 Genbank gene 1759525 1759614 . - . ID=gene-PUW35_08595;Name=PUW35_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08595 CP118132.1 Protein Homology CDS 1759525 1759614 . - 0 ID=cds-WJG94530.1;Parent=gene-PUW35_08595;Dbxref=NCBI_GP:WJG94530.1;Name=WJG94530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=PUW35_08595;product=YnhF family membrane protein;protein_id=WJG94530.1;transl_table=11 CP118132.1 Genbank gene 1759910 1760935 . + . ID=gene-PUW35_08600;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=PUW35_08600 CP118132.1 Protein Homology CDS 1759910 1760935 . + 0 ID=cds-WJG94531.1;Parent=gene-PUW35_08600;Dbxref=NCBI_GP:WJG94531.1;Name=WJG94531.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=PUW35_08600;product=HTH-type transcriptional repressor PurR;protein_id=WJG94531.1;transl_table=11 CP118132.1 Genbank gene 1760932 1761864 . - . ID=gene-PUW35_08605;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=PUW35_08605 CP118132.1 Protein Homology CDS 1760932 1761864 . - 0 ID=cds-WJG94532.1;Parent=gene-PUW35_08605;Dbxref=NCBI_GP:WJG94532.1;Name=WJG94532.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=PUW35_08605;product=DNA-binding transcriptional activator PunR;protein_id=WJG94532.1;transl_table=11 CP118132.1 Genbank gene 1761977 1763182 . + . ID=gene-PUW35_08610;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=PUW35_08610 CP118132.1 Protein Homology CDS 1761977 1763182 . + 0 ID=cds-WJG94533.1;Parent=gene-PUW35_08610;Dbxref=NCBI_GP:WJG94533.1;Name=WJG94533.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=PUW35_08610;product=purine nucleoside transporter PunC;protein_id=WJG94533.1;transl_table=11 CP118132.1 Genbank gene 1763472 1764620 . + . ID=gene-PUW35_08615;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=PUW35_08615 CP118132.1 Protein Homology CDS 1763472 1764620 . + 0 ID=cds-WJG94534.1;Parent=gene-PUW35_08615;Dbxref=NCBI_GP:WJG94534.1;Name=WJG94534.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=PUW35_08615;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WJG94534.1;transl_table=11 CP118132.1 Genbank gene 1764662 1765303 . - . ID=gene-PUW35_08620;Name=PUW35_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08620 CP118132.1 Protein Homology CDS 1764662 1765303 . - 0 ID=cds-WJG94535.1;Parent=gene-PUW35_08620;Dbxref=NCBI_GP:WJG94535.1;Name=WJG94535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=PUW35_08620;product=riboflavin synthase;protein_id=WJG94535.1;transl_table=11 CP118132.1 Genbank pseudogene 1765520 1766892 . + . ID=gene-PUW35_08625;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=pseudogene;locus_tag=PUW35_08625;pseudo=true CP118132.1 Protein Homology CDS 1765520 1766892 . + 0 ID=cds-PUW35_08625;Parent=gene-PUW35_08625;Note=frameshifted;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=PUW35_08625;product=multidrug efflux MATE transporter MdtK;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1767044 1767120 . + . ID=gene-PUW35_08630;Name=PUW35_08630;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_08630 CP118132.1 tRNAscan-SE tRNA 1767044 1767120 . + . ID=rna-PUW35_08630;Parent=gene-PUW35_08630;anticodon=(pos:1767078..1767080);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_08630;product=tRNA-Val CP118132.1 tRNAscan-SE exon 1767044 1767120 . + . ID=exon-PUW35_08630-1;Parent=rna-PUW35_08630;anticodon=(pos:1767078..1767080);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_08630;product=tRNA-Val CP118132.1 Genbank gene 1767131 1767207 . + . ID=gene-PUW35_08635;Name=PUW35_08635;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_08635 CP118132.1 tRNAscan-SE tRNA 1767131 1767207 . + . ID=rna-PUW35_08635;Parent=gene-PUW35_08635;anticodon=(pos:1767165..1767167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_08635;product=tRNA-Val CP118132.1 tRNAscan-SE exon 1767131 1767207 . + . ID=exon-PUW35_08635-1;Parent=rna-PUW35_08635;anticodon=(pos:1767165..1767167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_08635;product=tRNA-Val CP118132.1 Genbank gene 1767365 1768423 . - . ID=gene-PUW35_08640;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=PUW35_08640 CP118132.1 Protein Homology CDS 1767365 1768423 . - 0 ID=cds-WJG94536.1;Parent=gene-PUW35_08640;Dbxref=NCBI_GP:WJG94536.1;Name=WJG94536.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=PUW35_08640;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WJG94536.1;transl_table=11 CP118132.1 Genbank gene 1768420 1769199 . - . ID=gene-PUW35_08645;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=PUW35_08645 CP118132.1 Protein Homology CDS 1768420 1769199 . - 0 ID=cds-WJG94537.1;Parent=gene-PUW35_08645;Dbxref=NCBI_GP:WJG94537.1;Name=WJG94537.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=PUW35_08645;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WJG94537.1;transl_table=11 CP118132.1 Genbank gene 1769200 1769466 . - . ID=gene-PUW35_08650;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=PUW35_08650 CP118132.1 Protein Homology CDS 1769200 1769466 . - 0 ID=cds-WJG94538.1;Parent=gene-PUW35_08650;Dbxref=NCBI_GP:WJG94538.1;Name=WJG94538.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=PUW35_08650;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WJG94538.1;transl_table=11 CP118132.1 Genbank pseudogene 1769463 1770109 . - . ID=gene-PUW35_08655;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=pseudogene;locus_tag=PUW35_08655;pseudo=true CP118132.1 Protein Homology CDS 1769463 1770109 . - 0 ID=cds-PUW35_08655;Parent=gene-PUW35_08655;Note=frameshifted;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=PUW35_08655;product=SPI-2 type III secretion system export apparatus protein SsaR;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1770177 1771145 . - . ID=gene-PUW35_08660;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=PUW35_08660 CP118132.1 Protein Homology CDS 1770177 1771145 . - 0 ID=cds-WJG94539.1;Parent=gene-PUW35_08660;Dbxref=NCBI_GP:WJG94539.1;Name=WJG94539.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=PUW35_08660;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WJG94539.1;transl_table=11 CP118132.1 Genbank gene 1771126 1771500 . - . ID=gene-PUW35_08665;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=PUW35_08665 CP118132.1 Protein Homology CDS 1771126 1771500 . - 0 ID=cds-WJG94540.1;Parent=gene-PUW35_08665;Dbxref=NCBI_GP:WJG94540.1;Name=WJG94540.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=PUW35_08665;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WJG94540.1;transl_table=11 CP118132.1 Genbank gene 1771481 1771858 . - . ID=gene-PUW35_08670;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=PUW35_08670 CP118132.1 Protein Homology CDS 1771481 1771858 . - 0 ID=cds-WJG95059.1;Parent=gene-PUW35_08670;Dbxref=NCBI_GP:WJG95059.1;Name=WJG95059.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=PUW35_08670;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WJG95059.1;transl_table=11 CP118132.1 Genbank gene 1771861 1773162 . - . ID=gene-PUW35_08675;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=PUW35_08675 CP118132.1 Protein Homology CDS 1771861 1773162 . - 0 ID=cds-WJG94541.1;Parent=gene-PUW35_08675;Dbxref=NCBI_GP:WJG94541.1;Name=WJG94541.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=PUW35_08675;product=SctN family type III secretion system ATPase SsaN;protein_id=WJG94541.1;transl_table=11 CP118132.1 Genbank gene 1773152 1775197 . - . ID=gene-PUW35_08680;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=PUW35_08680 CP118132.1 Protein Homology CDS 1773152 1775197 . - 0 ID=cds-WJG94542.1;Parent=gene-PUW35_08680;Dbxref=NCBI_GP:WJG94542.1;Name=WJG94542.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=PUW35_08680;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WJG94542.1;transl_table=11 CP118132.1 Genbank gene 1775182 1775550 . - . ID=gene-PUW35_08685;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=PUW35_08685 CP118132.1 Protein Homology CDS 1775182 1775550 . - 0 ID=cds-WJG94543.1;Parent=gene-PUW35_08685;Dbxref=NCBI_GP:WJG94543.1;Name=WJG94543.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=PUW35_08685;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WJG94543.1;transl_table=11 CP118132.1 Genbank gene 1775608 1776624 . - . ID=gene-PUW35_08690;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=PUW35_08690 CP118132.1 Protein Homology CDS 1775608 1776624 . - 0 ID=cds-WJG94544.1;Parent=gene-PUW35_08690;Dbxref=NCBI_GP:WJG94544.1;Name=WJG94544.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=PUW35_08690;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WJG94544.1;transl_table=11 CP118132.1 Genbank gene 1776590 1777264 . - . ID=gene-PUW35_08695;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=PUW35_08695 CP118132.1 Protein Homology CDS 1776590 1777264 . - 0 ID=cds-WJG94545.1;Parent=gene-PUW35_08695;Dbxref=NCBI_GP:WJG94545.1;Name=WJG94545.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=PUW35_08695;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WJG94545.1;transl_table=11 CP118132.1 Genbank gene 1777261 1777809 . - . ID=gene-PUW35_08700;Name=PUW35_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08700 CP118132.1 Protein Homology CDS 1777261 1777809 . - 0 ID=cds-WJG95060.1;Parent=gene-PUW35_08700;Dbxref=NCBI_GP:WJG95060.1;Name=WJG95060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=PUW35_08700;product=type III secretion system domain-containing protein;protein_id=WJG95060.1;transl_table=11 CP118132.1 Genbank gene 1777817 1778575 . - . ID=gene-PUW35_08705;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=PUW35_08705 CP118132.1 Protein Homology CDS 1777817 1778575 . - 0 ID=cds-WJG94546.1;Parent=gene-PUW35_08705;Dbxref=NCBI_GP:WJG94546.1;Name=WJG94546.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=PUW35_08705;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WJG94546.1;transl_table=11 CP118132.1 Genbank gene 1778572 1778820 . - . ID=gene-PUW35_08710;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=PUW35_08710 CP118132.1 Protein Homology CDS 1778572 1778820 . - 0 ID=cds-WJG95061.1;Parent=gene-PUW35_08710;Dbxref=NCBI_GP:WJG95061.1;Name=WJG95061.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460373.1;locus_tag=PUW35_08710;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WJG95061.1;transl_table=11 CP118132.1 Genbank gene 1778832 1779122 . - . ID=gene-PUW35_08715;Name=PUW35_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08715 CP118132.1 Protein Homology CDS 1778832 1779122 . - 0 ID=cds-WJG94547.1;Parent=gene-PUW35_08715;Dbxref=NCBI_GP:WJG94547.1;Name=WJG94547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=PUW35_08715;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WJG94547.1;transl_table=11 CP118132.1 Genbank gene 1779100 1779315 . - . ID=gene-PUW35_08720;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=PUW35_08720 CP118132.1 Protein Homology CDS 1779100 1779315 . - 0 ID=cds-WJG94548.1;Parent=gene-PUW35_08720;Dbxref=NCBI_GP:WJG94548.1;Name=WJG94548.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=PUW35_08720;product=type III secretion system needle filament protein SsaG;protein_id=WJG94548.1;transl_table=11 CP118132.1 Genbank gene 1779409 1780098 . - . ID=gene-PUW35_08725;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=PUW35_08725 CP118132.1 Protein Homology CDS 1779409 1780098 . - 0 ID=cds-WJG94549.1;Parent=gene-PUW35_08725;Dbxref=NCBI_GP:WJG94549.1;Name=WJG94549.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=PUW35_08725;product=pathogenicity island 2 effector protein SseG;protein_id=WJG94549.1;transl_table=11 CP118132.1 Genbank gene 1780095 1780877 . - . ID=gene-PUW35_08730;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=PUW35_08730 CP118132.1 Protein Homology CDS 1780095 1780877 . - 0 ID=cds-WJG94550.1;Parent=gene-PUW35_08730;Dbxref=NCBI_GP:WJG94550.1;Name=WJG94550.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=PUW35_08730;product=type III secretion systems effector SseF;protein_id=WJG94550.1;transl_table=11 CP118132.1 Genbank gene 1780893 1781327 . - . ID=gene-PUW35_08735;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=PUW35_08735 CP118132.1 Protein Homology CDS 1780893 1781327 . - 0 ID=cds-WJG94551.1;Parent=gene-PUW35_08735;Dbxref=NCBI_GP:WJG94551.1;Name=WJG94551.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=PUW35_08735;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WJG94551.1;transl_table=11 CP118132.1 Genbank gene 1781379 1781795 . - . ID=gene-PUW35_08740;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=PUW35_08740 CP118132.1 Protein Homology CDS 1781379 1781795 . - 0 ID=cds-WJG94552.1;Parent=gene-PUW35_08740;Dbxref=NCBI_GP:WJG94552.1;Name=WJG94552.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=PUW35_08740;product=LcrR family type III secretion system chaperone SseE;protein_id=WJG94552.1;transl_table=11 CP118132.1 Genbank gene 1781798 1782385 . - . ID=gene-PUW35_08745;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=PUW35_08745 CP118132.1 Protein Homology CDS 1781798 1782385 . - 0 ID=cds-WJG94553.1;Parent=gene-PUW35_08745;Dbxref=NCBI_GP:WJG94553.1;Name=WJG94553.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=PUW35_08745;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WJG94553.1;transl_table=11 CP118132.1 Genbank pseudogene 1782401 1783854 . - . ID=gene-PUW35_08750;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=pseudogene;locus_tag=PUW35_08750;pseudo=true CP118132.1 Protein Homology CDS 1782401 1783854 . - 0 ID=cds-PUW35_08750;Parent=gene-PUW35_08750;Note=frameshifted;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=PUW35_08750;product=SPI-2 type III secretion system translocon protein SseC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1783857 1784330 . - . ID=gene-PUW35_08755;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=PUW35_08755 CP118132.1 Protein Homology CDS 1783857 1784330 . - 0 ID=cds-WJG94554.1;Parent=gene-PUW35_08755;Dbxref=NCBI_GP:WJG94554.1;Name=WJG94554.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=PUW35_08755;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WJG94554.1;transl_table=11 CP118132.1 Genbank gene 1784327 1784917 . - . ID=gene-PUW35_08760;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=PUW35_08760 CP118132.1 Protein Homology CDS 1784327 1784917 . - 0 ID=cds-WJG94555.1;Parent=gene-PUW35_08760;Dbxref=NCBI_GP:WJG94555.1;Name=WJG94555.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=PUW35_08760;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WJG94555.1;transl_table=11 CP118132.1 Genbank gene 1784924 1785250 . - . ID=gene-PUW35_08765;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PUW35_08765 CP118132.1 Protein Homology CDS 1784924 1785250 . - 0 ID=cds-WJG95062.1;Parent=gene-PUW35_08765;Dbxref=NCBI_GP:WJG95062.1;Name=WJG95062.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=PUW35_08765;product=SPI-2 type III secretion system chaperone SseA;protein_id=WJG95062.1;transl_table=11 CP118132.1 Genbank gene 1785453 1785695 . - . ID=gene-PUW35_08770;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=PUW35_08770 CP118132.1 Protein Homology CDS 1785453 1785695 . - 0 ID=cds-WJG94556.1;Parent=gene-PUW35_08770;Dbxref=NCBI_GP:WJG94556.1;Name=WJG94556.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=PUW35_08770;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WJG94556.1;transl_table=11 CP118132.1 Genbank gene 1785703 1786914 . - . ID=gene-PUW35_08775;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=PUW35_08775 CP118132.1 Protein Homology CDS 1785703 1786914 . - 0 ID=cds-WJG94557.1;Parent=gene-PUW35_08775;Dbxref=NCBI_GP:WJG94557.1;Name=WJG94557.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=PUW35_08775;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WJG94557.1;transl_table=11 CP118132.1 Genbank gene 1786895 1788388 . - . ID=gene-PUW35_08780;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=PUW35_08780 CP118132.1 Protein Homology CDS 1786895 1788388 . - 0 ID=cds-WJG94558.1;Parent=gene-PUW35_08780;Dbxref=NCBI_GP:WJG94558.1;Name=WJG94558.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=PUW35_08780;product=SPI-2 type III secretion system protein SpiA;protein_id=WJG94558.1;transl_table=11 CP118132.1 Genbank gene 1788390 1788791 . - . ID=gene-PUW35_08785;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=PUW35_08785 CP118132.1 Protein Homology CDS 1788390 1788791 . - 0 ID=cds-WJG94559.1;Parent=gene-PUW35_08785;Dbxref=NCBI_GP:WJG94559.1;Name=WJG94559.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=PUW35_08785;product=SPI-2 type III secretion system protein SpiC;protein_id=WJG94559.1;transl_table=11 CP118132.1 Genbank gene 1789192 1791954 . + . ID=gene-PUW35_08790;Name=PUW35_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08790 CP118132.1 Protein Homology CDS 1789192 1791954 . + 0 ID=cds-WJG94560.1;Parent=gene-PUW35_08790;Dbxref=NCBI_GP:WJG94560.1;Name=WJG94560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=PUW35_08790;product=two component system sensor kinase;protein_id=WJG94560.1;transl_table=11 CP118132.1 Genbank gene 1791985 1792623 . + . ID=gene-PUW35_08795;Name=PUW35_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08795 CP118132.1 Protein Homology CDS 1791985 1792623 . + 0 ID=cds-WJG94561.1;Parent=gene-PUW35_08795;Dbxref=NCBI_GP:WJG94561.1;Name=WJG94561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=PUW35_08795;product=two component system response regulator;protein_id=WJG94561.1;transl_table=11 CP118132.1 Genbank gene 1792802 1793530 . + . ID=gene-PUW35_08800;Name=PUW35_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08800 CP118132.1 Protein Homology CDS 1792802 1793530 . + 0 ID=cds-WJG94562.1;Parent=gene-PUW35_08800;Dbxref=NCBI_GP:WJG94562.1;Name=WJG94562.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=PUW35_08800;product=MerR family transcriptional regulator;protein_id=WJG94562.1;transl_table=11 CP118132.1 Genbank gene 1793703 1794662 . + . ID=gene-PUW35_08805;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=PUW35_08805 CP118132.1 Protein Homology CDS 1793703 1794662 . + 0 ID=cds-WJG94563.1;Parent=gene-PUW35_08805;Dbxref=NCBI_GP:WJG94563.1;Name=WJG94563.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=PUW35_08805;product=transcriptional regulator MlrB;protein_id=WJG94563.1;transl_table=11 CP118132.1 Genbank gene 1794784 1794996 . - . ID=gene-PUW35_08810;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=PUW35_08810 CP118132.1 Protein Homology CDS 1794784 1794996 . - 0 ID=cds-WJG94564.1;Parent=gene-PUW35_08810;Dbxref=NCBI_GP:WJG94564.1;Name=WJG94564.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=PUW35_08810;product=fumarate hydratase FumD;protein_id=WJG94564.1;transl_table=11 CP118132.1 Genbank gene 1795094 1795714 . - . ID=gene-PUW35_08815;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=PUW35_08815 CP118132.1 Protein Homology CDS 1795094 1795714 . - 0 ID=cds-WJG94565.1;Parent=gene-PUW35_08815;Dbxref=NCBI_GP:WJG94565.1;Name=WJG94565.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=PUW35_08815;product=tetrathionate respiration response regulator TtrR;protein_id=WJG94565.1;transl_table=11 CP118132.1 Genbank gene 1795689 1797467 . - . ID=gene-PUW35_08820;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=PUW35_08820 CP118132.1 Protein Homology CDS 1795689 1797467 . - 0 ID=cds-WJG94566.1;Parent=gene-PUW35_08820;Dbxref=NCBI_GP:WJG94566.1;Name=WJG94566.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=PUW35_08820;product=tetrathionate respiration histidine kinase TtrS;protein_id=WJG94566.1;transl_table=11 CP118132.1 Genbank pseudogene 1797631 1798384 . + . ID=gene-PUW35_08825;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=pseudogene;locus_tag=PUW35_08825;pseudo=true CP118132.1 Protein Homology CDS 1797631 1798384 . + 0 ID=cds-PUW35_08825;Parent=gene-PUW35_08825;Note=frameshifted;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460350.1;locus_tag=PUW35_08825;product=tetrathionate reductase subunit TtrB;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1798385 1799403 . + . ID=gene-PUW35_08830;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=pseudogene;locus_tag=PUW35_08830;pseudo=true CP118132.1 Protein Homology CDS 1798385 1799403 . + 0 ID=cds-PUW35_08830;Parent=gene-PUW35_08830;Note=frameshifted;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=PUW35_08830;product=tetrathionate reductase subunit TtrC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1799396 1802458 . + . ID=gene-PUW35_08835;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=PUW35_08835 CP118132.1 Protein Homology CDS 1799396 1802458 . + 0 ID=cds-WJG94567.1;Parent=gene-PUW35_08835;Dbxref=NCBI_GP:WJG94567.1;Name=WJG94567.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=PUW35_08835;product=tetrathionate reductase subunit TtrA;protein_id=WJG94567.1;transl_table=11 CP118132.1 Genbank gene 1802781 1804007 . + . ID=gene-PUW35_08840;Name=PUW35_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08840 CP118132.1 Protein Homology CDS 1802781 1804007 . + 0 ID=cds-WJG94568.1;Parent=gene-PUW35_08840;Dbxref=NCBI_GP:WJG94568.1;Name=WJG94568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=PUW35_08840;product=PfkB family carbohydrate kinase;protein_id=WJG94568.1;transl_table=11 CP118132.1 Genbank pseudogene 1804019 1804756 . + . ID=gene-PUW35_08845;Name=PUW35_08845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08845;pseudo=true CP118132.1 Protein Homology CDS 1804019 1804756 . + 0 ID=cds-PUW35_08845;Parent=gene-PUW35_08845;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=PUW35_08845;product=glutamine amidotransferase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1804816 1805708 . + . ID=gene-PUW35_08850;Name=PUW35_08850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08850;pseudo=true CP118132.1 Protein Homology CDS 1804816 1805708 . + 0 ID=cds-PUW35_08850;Parent=gene-PUW35_08850;Note=frameshifted;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=PUW35_08850;product=proline iminopeptidase-family hydrolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1805730 1807073 . + . ID=gene-PUW35_08855;Name=PUW35_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08855 CP118132.1 Protein Homology CDS 1805730 1807073 . + 0 ID=cds-WJG94569.1;Parent=gene-PUW35_08855;Dbxref=NCBI_GP:WJG94569.1;Name=WJG94569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=PUW35_08855;product=APC family permease;protein_id=WJG94569.1;transl_table=11 CP118132.1 Genbank gene 1807475 1808887 . + . ID=gene-PUW35_08860;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=PUW35_08860 CP118132.1 Protein Homology CDS 1807475 1808887 . + 0 ID=cds-WJG94570.1;Parent=gene-PUW35_08860;Dbxref=NCBI_GP:WJG94570.1;Name=WJG94570.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=PUW35_08860;product=pyruvate kinase PykF;protein_id=WJG94570.1;transl_table=11 CP118132.1 Genbank gene 1809197 1809433 . + . ID=gene-PUW35_08865;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=PUW35_08865 CP118132.1 Protein Homology CDS 1809197 1809433 . + 0 ID=cds-WJG94571.1;Parent=gene-PUW35_08865;Dbxref=NCBI_GP:WJG94571.1;Name=WJG94571.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=PUW35_08865;product=murein lipoprotein Lpp;protein_id=WJG94571.1;transl_table=11 CP118132.1 Genbank gene 1809516 1809758 . + . ID=gene-PUW35_08870;Name=PUW35_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08870 CP118132.1 Protein Homology CDS 1809516 1809758 . + 0 ID=cds-WJG94572.1;Parent=gene-PUW35_08870;Dbxref=NCBI_GP:WJG94572.1;Name=WJG94572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082333.1;locus_tag=PUW35_08870;product=major outer membrane lipoprotein;protein_id=WJG94572.1;transl_table=11 CP118132.1 Genbank pseudogene 1809824 1810825 . - . ID=gene-PUW35_08875;Name=PUW35_08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08875;pseudo=true CP118132.1 Protein Homology CDS 1809824 1810825 . - 0 ID=cds-PUW35_08875;Parent=gene-PUW35_08875;Note=internal stop;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=PUW35_08875;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1810980 1811396 . - . ID=gene-PUW35_08880;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=PUW35_08880 CP118132.1 Protein Homology CDS 1810980 1811396 . - 0 ID=cds-WJG94573.1;Parent=gene-PUW35_08880;Dbxref=NCBI_GP:WJG94573.1;Name=WJG94573.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=PUW35_08880;product=cysteine desulfuration protein SufE;protein_id=WJG94573.1;transl_table=11 CP118132.1 Genbank gene 1811409 1812629 . - . ID=gene-PUW35_08885;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=PUW35_08885 CP118132.1 Protein Homology CDS 1811409 1812629 . - 0 ID=cds-WJG94574.1;Parent=gene-PUW35_08885;Dbxref=NCBI_GP:WJG94574.1;Name=WJG94574.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=PUW35_08885;product=cysteine desulfurase SufS;protein_id=WJG94574.1;transl_table=11 CP118132.1 Genbank gene 1812626 1813897 . - . ID=gene-PUW35_08890;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=PUW35_08890 CP118132.1 Protein Homology CDS 1812626 1813897 . - 0 ID=cds-WJG94575.1;Parent=gene-PUW35_08890;Dbxref=NCBI_GP:WJG94575.1;Name=WJG94575.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=PUW35_08890;product=Fe-S cluster assembly protein SufD;protein_id=WJG94575.1;transl_table=11 CP118132.1 Genbank gene 1813872 1814618 . - . ID=gene-PUW35_08895;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=PUW35_08895 CP118132.1 Protein Homology CDS 1813872 1814618 . - 0 ID=cds-WJG94576.1;Parent=gene-PUW35_08895;Dbxref=NCBI_GP:WJG94576.1;Name=WJG94576.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=PUW35_08895;product=Fe-S cluster assembly ATPase SufC;protein_id=WJG94576.1;transl_table=11 CP118132.1 Genbank gene 1814635 1816122 . - . ID=gene-PUW35_08900;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=PUW35_08900 CP118132.1 Protein Homology CDS 1814635 1816122 . - 0 ID=cds-WJG94577.1;Parent=gene-PUW35_08900;Dbxref=NCBI_GP:WJG94577.1;Name=WJG94577.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=PUW35_08900;product=Fe-S cluster assembly protein SufB;protein_id=WJG94577.1;transl_table=11 CP118132.1 Genbank gene 1816131 1816499 . - . ID=gene-PUW35_08905;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=PUW35_08905 CP118132.1 Protein Homology CDS 1816131 1816499 . - 0 ID=cds-WJG94578.1;Parent=gene-PUW35_08905;Dbxref=NCBI_GP:WJG94578.1;Name=WJG94578.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=PUW35_08905;product=Fe-S cluster assembly scaffold SufA;protein_id=WJG94578.1;transl_table=11 CP118132.1 Genbank pseudogene 1816926 1818271 . + . ID=gene-PUW35_08910;Name=PUW35_08910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08910;pseudo=true CP118132.1 Protein Homology CDS 1816926 1818271 . + 0 ID=cds-PUW35_08910;Parent=gene-PUW35_08910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=PUW35_08910;product=L-cystine transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1818559 1818747 . - . ID=gene-PUW35_08915;Name=PUW35_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08915 CP118132.1 Protein Homology CDS 1818559 1818747 . - 0 ID=cds-WJG94579.1;Parent=gene-PUW35_08915;Dbxref=NCBI_GP:WJG94579.1;Name=WJG94579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=PUW35_08915;product=YdiH family protein;protein_id=WJG94579.1;transl_table=11 CP118132.1 Genbank gene 1818846 1819256 . - . ID=gene-PUW35_08920;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=PUW35_08920 CP118132.1 Protein Homology CDS 1818846 1819256 . - 0 ID=cds-WJG94580.1;Parent=gene-PUW35_08920;Dbxref=NCBI_GP:WJG94580.1;Name=WJG94580.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=PUW35_08920;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WJG94580.1;transl_table=11 CP118132.1 Genbank gene 1819253 1822309 . - . ID=gene-PUW35_08925;Name=PUW35_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08925 CP118132.1 Protein Homology CDS 1819253 1822309 . - 0 ID=cds-WJG94581.1;Parent=gene-PUW35_08925;Dbxref=NCBI_GP:WJG94581.1;Name=WJG94581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=PUW35_08925;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WJG94581.1;transl_table=11 CP118132.1 Genbank gene 1822574 1823692 . + . ID=gene-PUW35_08930;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=PUW35_08930 CP118132.1 Protein Homology CDS 1822574 1823692 . + 0 ID=cds-WJG94582.1;Parent=gene-PUW35_08930;Dbxref=NCBI_GP:WJG94582.1;Name=WJG94582.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=PUW35_08930;product=AI-2E family transporter YdiK;protein_id=WJG94582.1;transl_table=11 CP118132.1 Genbank gene 1823875 1823982 . + . ID=gene-PUW35_08935;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=PUW35_08935 CP118132.1 cmsearch antisense_RNA 1823875 1823982 . + . ID=rna-PUW35_08935;Parent=gene-PUW35_08935;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_08935;product=antisense sRNA RprA CP118132.1 cmsearch exon 1823875 1823982 . + . ID=exon-PUW35_08935-1;Parent=rna-PUW35_08935;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_08935;product=antisense sRNA RprA CP118132.1 Genbank gene 1824150 1824509 . + . ID=gene-PUW35_08940;Name=PUW35_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08940 CP118132.1 Protein Homology CDS 1824150 1824509 . + 0 ID=cds-WJG94583.1;Parent=gene-PUW35_08940;Dbxref=NCBI_GP:WJG94583.1;Name=WJG94583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=PUW35_08940;product=YdiL family protein;protein_id=WJG94583.1;transl_table=11 CP118132.1 Genbank gene 1824650 1825861 . + . ID=gene-PUW35_08945;Name=PUW35_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08945 CP118132.1 Protein Homology CDS 1824650 1825861 . + 0 ID=cds-WJG94584.1;Parent=gene-PUW35_08945;Dbxref=NCBI_GP:WJG94584.1;Name=WJG94584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=PUW35_08945;product=MFS transporter;protein_id=WJG94584.1;transl_table=11 CP118132.1 Genbank gene 1826225 1827460 . + . ID=gene-PUW35_08950;Name=PUW35_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08950 CP118132.1 Protein Homology CDS 1826225 1827460 . + 0 ID=cds-WJG94585.1;Parent=gene-PUW35_08950;Dbxref=NCBI_GP:WJG94585.1;Name=WJG94585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=PUW35_08950;product=MFS transporter;protein_id=WJG94585.1;transl_table=11 CP118132.1 Genbank pseudogene 1827527 1828392 . + . ID=gene-PUW35_08955;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=pseudogene;locus_tag=PUW35_08955;pseudo=true CP118132.1 Protein Homology CDS 1827527 1828392 . + 0 ID=cds-PUW35_08955;Parent=gene-PUW35_08955;Note=frameshifted;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=PUW35_08955;product=quinate/shikimate dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1828437 1829195 . + . ID=gene-PUW35_08960;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=PUW35_08960 CP118132.1 Protein Homology CDS 1828437 1829195 . + 0 ID=cds-WJG94586.1;Parent=gene-PUW35_08960;Dbxref=NCBI_GP:WJG94586.1;Name=WJG94586.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=PUW35_08960;product=type I 3-dehydroquinate dehydratase;protein_id=WJG94586.1;transl_table=11 CP118132.1 Genbank gene 1829349 1830944 . + . ID=gene-PUW35_08965;Name=PUW35_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08965 CP118132.1 Protein Homology CDS 1829349 1830944 . + 0 ID=cds-WJG94587.1;Parent=gene-PUW35_08965;Dbxref=NCBI_GP:WJG94587.1;Name=WJG94587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=PUW35_08965;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WJG94587.1;transl_table=11 CP118132.1 Genbank gene 1830958 1832109 . + . ID=gene-PUW35_08970;Name=PUW35_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08970 CP118132.1 Protein Homology CDS 1830958 1832109 . + 0 ID=cds-WJG94588.1;Parent=gene-PUW35_08970;Dbxref=NCBI_GP:WJG94588.1;Name=WJG94588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=PUW35_08970;product=acyl-CoA dehydrogenase;protein_id=WJG94588.1;transl_table=11 CP118132.1 Genbank gene 1832185 1833075 . - . ID=gene-PUW35_08975;Name=PUW35_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08975 CP118132.1 Protein Homology CDS 1832185 1833075 . - 0 ID=cds-WJG94589.1;Parent=gene-PUW35_08975;Dbxref=NCBI_GP:WJG94589.1;Name=WJG94589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=PUW35_08975;product=AraC family transcriptional regulator;protein_id=WJG94589.1;transl_table=11 CP118132.1 Genbank pseudogene 1833538 1834302 . + . ID=gene-PUW35_08980;Name=PUW35_08980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_08980;pseudo=true CP118132.1 Protein Homology CDS 1833538 1834302 . + 0 ID=cds-PUW35_08980;Parent=gene-PUW35_08980;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=PUW35_08980;product=electron transfer flavoprotein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1834324 1835259 . + . ID=gene-PUW35_08985;Name=PUW35_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08985 CP118132.1 Protein Homology CDS 1834324 1835259 . + 0 ID=cds-WJG94590.1;Parent=gene-PUW35_08985;Dbxref=NCBI_GP:WJG94590.1;Name=WJG94590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=PUW35_08985;product=electron transfer flavoprotein subunit alpha;protein_id=WJG94590.1;transl_table=11 CP118132.1 Genbank gene 1835316 1836599 . + . ID=gene-PUW35_08990;Name=PUW35_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08990 CP118132.1 Protein Homology CDS 1835316 1836599 . + 0 ID=cds-WJG94591.1;Parent=gene-PUW35_08990;Dbxref=NCBI_GP:WJG94591.1;Name=WJG94591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=PUW35_08990;product=FAD-dependent oxidoreductase;protein_id=WJG94591.1;transl_table=11 CP118132.1 Genbank gene 1836596 1836889 . + . ID=gene-PUW35_08995;Name=PUW35_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_08995 CP118132.1 Protein Homology CDS 1836596 1836889 . + 0 ID=cds-WJG94592.1;Parent=gene-PUW35_08995;Dbxref=NCBI_GP:WJG94592.1;Name=WJG94592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=PUW35_08995;product=ferredoxin family protein;protein_id=WJG94592.1;transl_table=11 CP118132.1 Genbank gene 1837127 1838767 . + . ID=gene-PUW35_09000;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=PUW35_09000 CP118132.1 Protein Homology CDS 1837127 1838767 . + 0 ID=cds-WJG94593.1;Parent=gene-PUW35_09000;Dbxref=NCBI_GP:WJG94593.1;Name=WJG94593.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=PUW35_09000;product=medium-chain fatty-acid--CoA ligase;protein_id=WJG94593.1;transl_table=11 CP118132.1 Genbank gene 1838809 1841187 . - . ID=gene-PUW35_09005;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=PUW35_09005 CP118132.1 Protein Homology CDS 1838809 1841187 . - 0 ID=cds-WJG94594.1;Parent=gene-PUW35_09005;Dbxref=NCBI_GP:WJG94594.1;Name=WJG94594.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=PUW35_09005;product=phosphoenolpyruvate synthase;protein_id=WJG94594.1;transl_table=11 CP118132.1 Genbank gene 1841523 1842356 . + . ID=gene-PUW35_09010;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=PUW35_09010 CP118132.1 Protein Homology CDS 1841523 1842356 . + 0 ID=cds-WJG94595.1;Parent=gene-PUW35_09010;Dbxref=NCBI_GP:WJG94595.1;Name=WJG94595.1;gbkey=CDS;gene=ppsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=PUW35_09010;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WJG94595.1;transl_table=11 CP118132.1 Genbank gene 1842512 1843558 . + . ID=gene-PUW35_09015;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=PUW35_09015 CP118132.1 Protein Homology CDS 1842512 1843558 . + 0 ID=cds-WJG94596.1;Parent=gene-PUW35_09015;Dbxref=NCBI_GP:WJG94596.1;Name=WJG94596.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=PUW35_09015;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WJG94596.1;transl_table=11 CP118132.1 Genbank gene 1843715 1843906 . + . ID=gene-PUW35_09020;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=PUW35_09020 CP118132.1 Protein Homology CDS 1843715 1843906 . + 0 ID=cds-WJG95063.1;Parent=gene-PUW35_09020;Dbxref=NCBI_GP:WJG95063.1;Name=WJG95063.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=PUW35_09020;product=hemin uptake protein HemP;protein_id=WJG95063.1;transl_table=11 CP118132.1 Genbank pseudogene 1843941 1845375 . - . ID=gene-PUW35_09025;Name=selO;gbkey=Gene;gene=selO;gene_biotype=pseudogene;locus_tag=PUW35_09025;pseudo=true CP118132.1 Protein Homology CDS 1843941 1845375 . - 0 ID=cds-PUW35_09025;Parent=gene-PUW35_09025;Note=frameshifted;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,protein adenylyltransferase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=PUW35_09025;product=protein adenylyltransferase SelO;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1845426 1846139 . - . ID=gene-PUW35_09030;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=PUW35_09030 CP118132.1 Protein Homology CDS 1845426 1846139 . - 0 ID=cds-WJG94597.1;Parent=gene-PUW35_09030;Dbxref=NCBI_GP:WJG94597.1;Name=WJG94597.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=PUW35_09030;product=anti-FlhDC factor YdiV;protein_id=WJG94597.1;transl_table=11 CP118132.1 Genbank gene 1846453 1846917 . - . ID=gene-PUW35_09035;Name=PUW35_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09035 CP118132.1 Protein Homology CDS 1846453 1846917 . - 0 ID=cds-WJG94598.1;Parent=gene-PUW35_09035;Dbxref=NCBI_GP:WJG94598.1;Name=WJG94598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=PUW35_09035;product=NlpC/P60 family protein;protein_id=WJG94598.1;transl_table=11 CP118132.1 Genbank gene 1846994 1847743 . - . ID=gene-PUW35_09040;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=PUW35_09040 CP118132.1 Protein Homology CDS 1846994 1847743 . - 0 ID=cds-WJG94599.1;Parent=gene-PUW35_09040;Dbxref=NCBI_GP:WJG94599.1;Name=WJG94599.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=PUW35_09040;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WJG94599.1;transl_table=11 CP118132.1 Genbank pseudogene 1847743 1848293 . - . ID=gene-PUW35_09045;Name=PUW35_09045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09045;pseudo=true CP118132.1 Protein Homology CDS 1847743 1848293 . - 0 ID=cds-PUW35_09045;Parent=gene-PUW35_09045;Note=frameshifted;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=PUW35_09045;product=glutathione peroxidase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1848385 1849365 . - . ID=gene-PUW35_09050;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=PUW35_09050 CP118132.1 Protein Homology CDS 1848385 1849365 . - 0 ID=cds-WJG94600.1;Parent=gene-PUW35_09050;Dbxref=NCBI_GP:WJG94600.1;Name=WJG94600.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=PUW35_09050;product=vitamin B12 ABC transporter permease BtuC;protein_id=WJG94600.1;transl_table=11 CP118132.1 Genbank gene 1849568 1849867 . - . ID=gene-PUW35_09055;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=PUW35_09055 CP118132.1 Protein Homology CDS 1849568 1849867 . - 0 ID=cds-WJG94601.1;Parent=gene-PUW35_09055;Dbxref=NCBI_GP:WJG94601.1;Name=WJG94601.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=PUW35_09055;product=integration host factor subunit alpha;protein_id=WJG94601.1;transl_table=11 CP118132.1 Genbank gene 1849872 1852259 . - . ID=gene-PUW35_09060;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=PUW35_09060 CP118132.1 Protein Homology CDS 1849872 1852259 . - 0 ID=cds-WJG94602.1;Parent=gene-PUW35_09060;Dbxref=NCBI_GP:WJG94602.1;Name=WJG94602.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=PUW35_09060;product=phenylalanine--tRNA ligase subunit beta;protein_id=WJG94602.1;transl_table=11 CP118132.1 Genbank pseudogene 1852275 1853257 . - . ID=gene-PUW35_09065;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=pseudogene;locus_tag=PUW35_09065;pseudo=true CP118132.1 Protein Homology CDS 1852275 1853257 . - 0 ID=cds-PUW35_09065;Parent=gene-PUW35_09065;Note=frameshifted;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=PUW35_09065;product=phenylalanine--tRNA ligase subunit alpha;pseudo=true;transl_table=11 CP118132.1 cmsearch sequence_feature 1853320 1853443 . - . ID=id-CP118132.1:1853320..1853443;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118132.1 Genbank gene 1853394 1853438 . - . ID=gene-PUW35_09070;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=PUW35_09070 CP118132.1 Protein Homology CDS 1853394 1853438 . - 0 ID=cds-WJG95064.1;Parent=gene-PUW35_09070;Dbxref=NCBI_GP:WJG95064.1;Name=WJG95064.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=PUW35_09070;product=pheST operon leader peptide PheM;protein_id=WJG95064.1;transl_table=11 CP118132.1 Genbank gene 1853559 1853915 . - . ID=gene-PUW35_09075;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=PUW35_09075 CP118132.1 Protein Homology CDS 1853559 1853915 . - 0 ID=cds-WJG94603.1;Parent=gene-PUW35_09075;Dbxref=NCBI_GP:WJG94603.1;Name=WJG94603.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=PUW35_09075;product=50S ribosomal protein L20;protein_id=WJG94603.1;transl_table=11 CP118132.1 Genbank gene 1853966 1854163 . - . ID=gene-PUW35_09080;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=PUW35_09080 CP118132.1 Protein Homology CDS 1853966 1854163 . - 0 ID=cds-WJG94604.1;Parent=gene-PUW35_09080;Dbxref=NCBI_GP:WJG94604.1;Name=WJG94604.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=PUW35_09080;product=50S ribosomal protein L35;protein_id=WJG94604.1;transl_table=11 CP118132.1 Genbank gene 1854259 1854801 . - . ID=gene-PUW35_09085;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=PUW35_09085 CP118132.1 Protein Homology CDS 1854259 1854801 . - 0 ID=cds-WJG95065.1;Parent=gene-PUW35_09085;Dbxref=NCBI_GP:WJG95065.1;Name=WJG95065.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=PUW35_09085;product=translation initiation factor IF-3;protein_id=WJG95065.1;transl_table=11 CP118132.1 Genbank gene 1854805 1856733 . - . ID=gene-PUW35_09090;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=PUW35_09090 CP118132.1 Protein Homology CDS 1854805 1856733 . - 0 ID=cds-WJG94605.1;Parent=gene-PUW35_09090;Dbxref=NCBI_GP:WJG94605.1;Name=WJG94605.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=PUW35_09090;product=threonine--tRNA ligase;protein_id=WJG94605.1;transl_table=11 CP118132.1 Genbank gene 1857651 1858874 . + . ID=gene-PUW35_09095;Name=PUW35_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09095 CP118132.1 Protein Homology CDS 1857651 1858874 . + 0 ID=cds-WJG94606.1;Parent=gene-PUW35_09095;Dbxref=NCBI_GP:WJG94606.1;Name=WJG94606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=PUW35_09095;product=O-antigen polymerase;protein_id=WJG94606.1;transl_table=11 CP118132.1 Genbank pseudogene 1859181 1859386 . - . ID=gene-PUW35_09100;Name=PUW35_09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09100;pseudo=true CP118132.1 Protein Homology CDS 1859181 1859386 . - 0 ID=cds-PUW35_09100;Parent=gene-PUW35_09100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=PUW35_09100;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1859559 1860413 . - . ID=gene-PUW35_09105;Name=PUW35_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09105 CP118132.1 Protein Homology CDS 1859559 1860413 . - 0 ID=cds-WJG94607.1;Parent=gene-PUW35_09105;Dbxref=NCBI_GP:WJG94607.1;Name=WJG94607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=PUW35_09105;product=DNA/RNA non-specific endonuclease;protein_id=WJG94607.1;transl_table=11 CP118132.1 Genbank pseudogene 1860434 1860723 . - . ID=gene-PUW35_09110;Name=PUW35_09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09110;pseudo=true CP118132.1 Protein Homology CDS 1860434 1860723 . - 0 ID=cds-PUW35_09110;Parent=gene-PUW35_09110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=PUW35_09110;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1860866 1861825 . + . ID=gene-PUW35_09115;Name=PUW35_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09115 CP118132.1 Protein Homology CDS 1860866 1861825 . + 0 ID=cds-WJG94608.1;Parent=gene-PUW35_09115;Dbxref=NCBI_GP:WJG94608.1;Name=WJG94608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=PUW35_09115;product=lipid A deacylase LpxR family protein;protein_id=WJG94608.1;transl_table=11 CP118132.1 Genbank gene 1861874 1862632 . - . ID=gene-PUW35_09120;Name=PUW35_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09120 CP118132.1 Protein Homology CDS 1861874 1862632 . - 0 ID=cds-WJG94609.1;Parent=gene-PUW35_09120;Dbxref=NCBI_GP:WJG94609.1;Name=WJG94609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=PUW35_09120;product=YdiY family protein;protein_id=WJG94609.1;transl_table=11 CP118132.1 Genbank gene 1862921 1863853 . + . ID=gene-PUW35_09125;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=PUW35_09125 CP118132.1 Protein Homology CDS 1862921 1863853 . + 0 ID=cds-WJG94610.1;Parent=gene-PUW35_09125;Dbxref=NCBI_GP:WJG94610.1;Name=WJG94610.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=PUW35_09125;product=6-phosphofructokinase II;protein_id=WJG94610.1;transl_table=11 CP118132.1 Genbank gene 1863949 1864239 . + . ID=gene-PUW35_09130;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=PUW35_09130 CP118132.1 Protein Homology CDS 1863949 1864239 . + 0 ID=cds-WJG94611.1;Parent=gene-PUW35_09130;Dbxref=NCBI_GP:WJG94611.1;Name=WJG94611.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=PUW35_09130;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WJG94611.1;transl_table=11 CP118132.1 Genbank gene 1864346 1865206 . + . ID=gene-PUW35_09135;Name=PUW35_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09135 CP118132.1 Protein Homology CDS 1864346 1865206 . + 0 ID=cds-WJG94612.1;Parent=gene-PUW35_09135;Dbxref=NCBI_GP:WJG94612.1;Name=WJG94612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=PUW35_09135;product=fructosamine kinase family protein;protein_id=WJG94612.1;transl_table=11 CP118132.1 Genbank gene 1865249 1865785 . - . ID=gene-PUW35_09140;Name=PUW35_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09140 CP118132.1 Protein Homology CDS 1865249 1865785 . - 0 ID=cds-WJG94613.1;Parent=gene-PUW35_09140;Dbxref=NCBI_GP:WJG94613.1;Name=WJG94613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=PUW35_09140;product=YniB family protein;protein_id=WJG94613.1;transl_table=11 CP118132.1 Genbank gene 1865934 1866602 . + . ID=gene-PUW35_09145;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=PUW35_09145 CP118132.1 Protein Homology CDS 1865934 1866602 . + 0 ID=cds-WJG94614.1;Parent=gene-PUW35_09145;Dbxref=NCBI_GP:WJG94614.1;Name=WJG94614.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=PUW35_09145;product=hexitol phosphatase HxpB;protein_id=WJG94614.1;transl_table=11 CP118132.1 Genbank gene 1866740 1867339 . + . ID=gene-PUW35_09150;Name=PUW35_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09150 CP118132.1 Protein Homology CDS 1866740 1867339 . + 0 ID=cds-WJG94615.1;Parent=gene-PUW35_09150;Dbxref=NCBI_GP:WJG94615.1;Name=WJG94615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=PUW35_09150;product=metal-dependent hydrolase;protein_id=WJG94615.1;transl_table=11 CP118132.1 Genbank gene 1867476 1868867 . + . ID=gene-PUW35_09155;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=PUW35_09155 CP118132.1 Protein Homology CDS 1867476 1868867 . + 0 ID=cds-WJG94616.1;Parent=gene-PUW35_09155;Dbxref=NCBI_GP:WJG94616.1;Name=WJG94616.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=PUW35_09155;product=cystine/sulfocysteine:cation symporter;protein_id=WJG94616.1;transl_table=11 CP118132.1 Genbank gene 1868970 1869212 . - . ID=gene-PUW35_09160;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=PUW35_09160 CP118132.1 Protein Homology CDS 1868970 1869212 . - 0 ID=cds-WJG94617.1;Parent=gene-PUW35_09160;Dbxref=NCBI_GP:WJG94617.1;Name=WJG94617.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=PUW35_09160;product=cell division activator CedA;protein_id=WJG94617.1;transl_table=11 CP118132.1 Genbank gene 1869577 1871829 . + . ID=gene-PUW35_09165;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=PUW35_09165 CP118132.1 Protein Homology CDS 1869577 1871829 . + 0 ID=cds-WJG94618.1;Parent=gene-PUW35_09165;Dbxref=NCBI_GP:WJG94618.1;Name=WJG94618.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=PUW35_09165;product=catalase HPII;protein_id=WJG94618.1;transl_table=11 CP118132.1 Genbank gene 1871873 1872631 . - . ID=gene-PUW35_09170;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=PUW35_09170 CP118132.1 Protein Homology CDS 1871873 1872631 . - 0 ID=cds-WJG94619.1;Parent=gene-PUW35_09170;Dbxref=NCBI_GP:WJG94619.1;Name=WJG94619.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=PUW35_09170;product=chitin disaccharide deacetylase;protein_id=WJG94619.1;transl_table=11 CP118132.1 Genbank gene 1872644 1873999 . - . ID=gene-PUW35_09175;Name=PUW35_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09175 CP118132.1 Protein Homology CDS 1872644 1873999 . - 0 ID=cds-WJG94620.1;Parent=gene-PUW35_09175;Dbxref=NCBI_GP:WJG94620.1;Name=WJG94620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=PUW35_09175;product=6-phospho-beta-glucosidase;protein_id=WJG94620.1;transl_table=11 CP118132.1 Genbank gene 1874124 1874966 . - . ID=gene-PUW35_09180;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=PUW35_09180 CP118132.1 Protein Homology CDS 1874124 1874966 . - 0 ID=cds-WJG94621.1;Parent=gene-PUW35_09180;Dbxref=NCBI_GP:WJG94621.1;Name=WJG94621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=PUW35_09180;product=transcriptional regulator ChbR;protein_id=WJG94621.1;transl_table=11 CP118132.1 Genbank gene 1874977 1875324 . - . ID=gene-PUW35_09185;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=PUW35_09185 CP118132.1 Protein Homology CDS 1874977 1875324 . - 0 ID=cds-WJG94622.1;Parent=gene-PUW35_09185;Dbxref=NCBI_GP:WJG94622.1;Name=WJG94622.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=PUW35_09185;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WJG94622.1;transl_table=11 CP118132.1 Genbank gene 1875375 1876733 . - . ID=gene-PUW35_09190;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=PUW35_09190 CP118132.1 Protein Homology CDS 1875375 1876733 . - 0 ID=cds-WJG94623.1;Parent=gene-PUW35_09190;Dbxref=NCBI_GP:WJG94623.1;Name=WJG94623.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=PUW35_09190;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WJG94623.1;transl_table=11 CP118132.1 Genbank gene 1876816 1877136 . - . ID=gene-PUW35_09195;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=PUW35_09195 CP118132.1 Protein Homology CDS 1876816 1877136 . - 0 ID=cds-WJG94624.1;Parent=gene-PUW35_09195;Dbxref=NCBI_GP:WJG94624.1;Name=WJG94624.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=PUW35_09195;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WJG94624.1;transl_table=11 CP118132.1 Genbank gene 1877437 1877778 . - . ID=gene-PUW35_09200;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=PUW35_09200 CP118132.1 Protein Homology CDS 1877437 1877778 . - 0 ID=cds-WJG94625.1;Parent=gene-PUW35_09200;Dbxref=NCBI_GP:WJG94625.1;Name=WJG94625.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=PUW35_09200;product=osmotically-inducible lipoprotein OsmE;protein_id=WJG94625.1;transl_table=11 CP118132.1 Genbank gene 1877997 1878824 . + . ID=gene-PUW35_09205;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=PUW35_09205 CP118132.1 Protein Homology CDS 1877997 1878824 . + 0 ID=cds-WJG94626.1;Parent=gene-PUW35_09205;Dbxref=NCBI_GP:WJG94626.1;Name=WJG94626.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=PUW35_09205;product=ammonia-dependent NAD(+) synthetase;protein_id=WJG94626.1;transl_table=11 CP118132.1 Genbank gene 1878945 1879826 . + . ID=gene-PUW35_09210;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=PUW35_09210 CP118132.1 Protein Homology CDS 1878945 1879826 . + 0 ID=cds-WJG94627.1;Parent=gene-PUW35_09210;Dbxref=NCBI_GP:WJG94627.1;Name=WJG94627.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=PUW35_09210;product=excinuclease Cho;protein_id=WJG94627.1;transl_table=11 CP118132.1 Genbank gene 1879901 1880386 . - . ID=gene-PUW35_09215;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=PUW35_09215 CP118132.1 Protein Homology CDS 1879901 1880386 . - 0 ID=cds-WJG94628.1;Parent=gene-PUW35_09215;Dbxref=NCBI_GP:WJG94628.1;Name=WJG94628.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=PUW35_09215;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WJG94628.1;transl_table=11 CP118132.1 Genbank gene 1880722 1881690 . - . ID=gene-PUW35_09220;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=PUW35_09220 CP118132.1 Protein Homology CDS 1880722 1881690 . - 0 ID=cds-WJG94629.1;Parent=gene-PUW35_09220;Dbxref=NCBI_GP:WJG94629.1;Name=WJG94629.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=PUW35_09220;product=succinylglutamate desuccinylase;protein_id=WJG94629.1;transl_table=11 CP118132.1 Genbank gene 1881683 1883026 . - . ID=gene-PUW35_09225;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=PUW35_09225 CP118132.1 Protein Homology CDS 1881683 1883026 . - 0 ID=cds-WJG94630.1;Parent=gene-PUW35_09225;Dbxref=NCBI_GP:WJG94630.1;Name=WJG94630.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=PUW35_09225;product=N-succinylarginine dihydrolase;protein_id=WJG94630.1;transl_table=11 CP118132.1 Genbank gene 1883023 1884501 . - . ID=gene-PUW35_09230;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=PUW35_09230 CP118132.1 Protein Homology CDS 1883023 1884501 . - 0 ID=cds-WJG94631.1;Parent=gene-PUW35_09230;Dbxref=NCBI_GP:WJG94631.1;Name=WJG94631.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=PUW35_09230;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WJG94631.1;transl_table=11 CP118132.1 Genbank pseudogene 1884498 1884926 . - . ID=gene-PUW35_09235;Name=PUW35_09235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09235;pseudo=true CP118132.1 Protein Homology CDS 1884498 1884926 . - 0 ID=cds-PUW35_09235;Parent=gene-PUW35_09235;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=PUW35_09235;product=arginine N-succinyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1884950 1886176 . - . ID=gene-PUW35_09240;Name=PUW35_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09240 CP118132.1 Protein Homology CDS 1884950 1886176 . - 0 ID=cds-WJG94632.1;Parent=gene-PUW35_09240;Dbxref=NCBI_GP:WJG94632.1;Name=WJG94632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=PUW35_09240;product=aspartate aminotransferase family protein;protein_id=WJG94632.1;transl_table=11 CP118132.1 Genbank gene 1886622 1887428 . + . ID=gene-PUW35_09245;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=PUW35_09245 CP118132.1 Protein Homology CDS 1886622 1887428 . + 0 ID=cds-WJG94633.1;Parent=gene-PUW35_09245;Dbxref=NCBI_GP:WJG94633.1;Name=WJG94633.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=PUW35_09245;product=exodeoxyribonuclease III;protein_id=WJG94633.1;transl_table=11 CP118132.1 Genbank gene 1887501 1887917 . + . ID=gene-PUW35_09250;Name=PUW35_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09250 CP118132.1 Protein Homology CDS 1887501 1887917 . + 0 ID=cds-WJG94634.1;Parent=gene-PUW35_09250;Dbxref=NCBI_GP:WJG94634.1;Name=WJG94634.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=PUW35_09250;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WJG94634.1;transl_table=11 CP118132.1 Genbank gene 1887877 1888152 . - . ID=gene-PUW35_09255;Name=PUW35_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09255 CP118132.1 Protein Homology CDS 1887877 1888152 . - 0 ID=cds-WJG94635.1;Parent=gene-PUW35_09255;Dbxref=NCBI_GP:WJG94635.1;Name=WJG94635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=PUW35_09255;product=YnjH family protein;protein_id=WJG94635.1;transl_table=11 CP118132.1 Genbank pseudogene 1888391 1889734 . + . ID=gene-PUW35_09260;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=pseudogene;locus_tag=PUW35_09260;pseudo=true CP118132.1 Protein Homology CDS 1888391 1889734 . + 0 ID=cds-PUW35_09260;Parent=gene-PUW35_09260;Note=internal stop;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=PUW35_09260;product=NADP-specific glutamate dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1889764 1891712 . - . ID=gene-PUW35_09265;Name=topB;gbkey=Gene;gene=topB;gene_biotype=pseudogene;locus_tag=PUW35_09265;pseudo=true CP118132.1 Protein Homology CDS 1889764 1891712 . - 0 ID=cds-PUW35_09265;Parent=gene-PUW35_09265;Note=frameshifted;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=PUW35_09265;product=DNA topoisomerase III;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1891717 1892760 . - . ID=gene-PUW35_09270;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=PUW35_09270 CP118132.1 Protein Homology CDS 1891717 1892760 . - 0 ID=cds-WJG94636.1;Parent=gene-PUW35_09270;Dbxref=NCBI_GP:WJG94636.1;Name=WJG94636.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=PUW35_09270;product=selenide%2C water dikinase SelD;protein_id=WJG94636.1;transl_table=11 CP118132.1 Genbank gene 1892878 1893429 . - . ID=gene-PUW35_09275;Name=PUW35_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09275 CP118132.1 Protein Homology CDS 1892878 1893429 . - 0 ID=cds-WJG94637.1;Parent=gene-PUW35_09275;Dbxref=NCBI_GP:WJG94637.1;Name=WJG94637.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=PUW35_09275;product=NAD(P)H nitroreductase;protein_id=WJG94637.1;transl_table=11 CP118132.1 Genbank gene 1893603 1895459 . + . ID=gene-PUW35_09280;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=PUW35_09280 CP118132.1 Protein Homology CDS 1893603 1895459 . + 0 ID=cds-WJG94638.1;Parent=gene-PUW35_09280;Dbxref=NCBI_GP:WJG94638.1;Name=WJG94638.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=PUW35_09280;product=signal peptide peptidase SppA;protein_id=WJG94638.1;transl_table=11 CP118132.1 Genbank gene 1895555 1896571 . + . ID=gene-PUW35_09285;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=PUW35_09285 CP118132.1 Protein Homology CDS 1895555 1896571 . + 0 ID=cds-WJG94639.1;Parent=gene-PUW35_09285;Dbxref=NCBI_GP:WJG94639.1;Name=WJG94639.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=PUW35_09285;product=asparaginase;protein_id=WJG94639.1;transl_table=11 CP118132.1 Genbank gene 1896598 1897254 . + . ID=gene-PUW35_09290;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=PUW35_09290 CP118132.1 Protein Homology CDS 1896598 1897254 . + 0 ID=cds-WJG94640.1;Parent=gene-PUW35_09290;Dbxref=NCBI_GP:WJG94640.1;Name=WJG94640.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=PUW35_09290;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WJG94640.1;transl_table=11 CP118132.1 Genbank gene 1897357 1897758 . - . ID=gene-PUW35_09295;Name=PUW35_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09295 CP118132.1 Protein Homology CDS 1897357 1897758 . - 0 ID=cds-WJG95066.1;Parent=gene-PUW35_09295;Dbxref=NCBI_GP:WJG95066.1;Name=WJG95066.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=PUW35_09295;product=MFS transporter;protein_id=WJG95066.1;transl_table=11 CP118132.1 Genbank gene 1897701 1898714 . - . ID=gene-PUW35_09300;Name=PUW35_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09300 CP118132.1 Protein Homology CDS 1897701 1898714 . - 0 ID=cds-WJG94641.1;Parent=gene-PUW35_09300;Dbxref=NCBI_GP:WJG94641.1;Name=WJG94641.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PUW35_09300;product=MFS transporter;protein_id=WJG94641.1;transl_table=11 CP118132.1 Genbank gene 1898850 1899608 . - . ID=gene-PUW35_09305;Name=PUW35_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09305 CP118132.1 Protein Homology CDS 1898850 1899608 . - 0 ID=cds-WJG94642.1;Parent=gene-PUW35_09305;Dbxref=NCBI_GP:WJG94642.1;Name=WJG94642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=PUW35_09305;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG94642.1;transl_table=11 CP118132.1 Genbank gene 1899738 1900721 . - . ID=gene-PUW35_09310;Name=PUW35_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09310 CP118132.1 Protein Homology CDS 1899738 1900721 . - 0 ID=cds-WJG94643.1;Parent=gene-PUW35_09310;Dbxref=NCBI_GP:WJG94643.1;Name=WJG94643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=PUW35_09310;product=aldo/keto reductase;protein_id=WJG94643.1;transl_table=11 CP118132.1 Genbank pseudogene 1900731 1901677 . - . ID=gene-PUW35_09315;Name=PUW35_09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09315;pseudo=true CP118132.1 Protein Homology CDS 1900731 1901677 . - 0 ID=cds-PUW35_09315;Parent=gene-PUW35_09315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226390.1;locus_tag=PUW35_09315;product=sugar kinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1901682 1902518 . - . ID=gene-PUW35_09320;Name=PUW35_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09320 CP118132.1 Protein Homology CDS 1901682 1902518 . - 0 ID=cds-WJG94644.1;Parent=gene-PUW35_09320;Dbxref=NCBI_GP:WJG94644.1;Name=WJG94644.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=PUW35_09320;product=ketose-bisphosphate aldolase;protein_id=WJG94644.1;transl_table=11 CP118132.1 Genbank pseudogene 1902540 1903584 . - . ID=gene-PUW35_09325;Name=PUW35_09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09325;pseudo=true CP118132.1 Protein Homology CDS 1902540 1903584 . - 0 ID=cds-PUW35_09325;Parent=gene-PUW35_09325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=PUW35_09325;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1903595 1904974 . - . ID=gene-PUW35_09330;Name=PUW35_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09330 CP118132.1 Protein Homology CDS 1903595 1904974 . - 0 ID=cds-WJG94645.1;Parent=gene-PUW35_09330;Dbxref=NCBI_GP:WJG94645.1;Name=WJG94645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=PUW35_09330;product=MFS transporter;protein_id=WJG94645.1;transl_table=11 CP118132.1 Genbank gene 1905001 1906077 . - . ID=gene-PUW35_09335;Name=PUW35_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09335 CP118132.1 Protein Homology CDS 1905001 1906077 . - 0 ID=cds-WJG94646.1;Parent=gene-PUW35_09335;Dbxref=NCBI_GP:WJG94646.1;Name=WJG94646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=PUW35_09335;product=zinc-binding dehydrogenase;protein_id=WJG94646.1;transl_table=11 CP118132.1 Genbank pseudogene 1906373 1906795 . + . ID=gene-PUW35_09340;Name=PUW35_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09340;pseudo=true CP118132.1 Protein Homology CDS 1906373 1906795 . + 0 ID=cds-PUW35_09340;Parent=gene-PUW35_09340;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892855.1;locus_tag=PUW35_09340;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1906971 1907249 . - . ID=gene-PUW35_09345;Name=PUW35_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09345 CP118132.1 Protein Homology CDS 1906971 1907249 . - 0 ID=cds-WJG94647.1;Parent=gene-PUW35_09345;Dbxref=NCBI_GP:WJG94647.1;Name=WJG94647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=PUW35_09345;product=YeaC family protein;protein_id=WJG94647.1;transl_table=11 CP118132.1 Genbank gene 1907291 1907704 . - . ID=gene-PUW35_09350;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=PUW35_09350 CP118132.1 Protein Homology CDS 1907291 1907704 . - 0 ID=cds-WJG94648.1;Parent=gene-PUW35_09350;Dbxref=NCBI_GP:WJG94648.1;Name=WJG94648.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=PUW35_09350;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WJG94648.1;transl_table=11 CP118132.1 Genbank gene 1908046 1909041 . + . ID=gene-PUW35_09355;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=PUW35_09355 CP118132.1 Protein Homology CDS 1908046 1909041 . + 0 ID=cds-WJG94649.1;Parent=gene-PUW35_09355;Dbxref=NCBI_GP:WJG94649.1;Name=WJG94649.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=PUW35_09355;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WJG94649.1;transl_table=11 CP118132.1 Genbank gene 1909370 1910254 . + . ID=gene-PUW35_09360;Name=PUW35_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09360 CP118132.1 Protein Homology CDS 1909370 1910254 . + 0 ID=cds-WJG94650.1;Parent=gene-PUW35_09360;Dbxref=NCBI_GP:WJG94650.1;Name=WJG94650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=PUW35_09360;product=D-hexose-6-phosphate mutarotase;protein_id=WJG94650.1;transl_table=11 CP118132.1 Genbank gene 1910353 1911210 . - . ID=gene-PUW35_09365;Name=PUW35_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09365 CP118132.1 Protein Homology CDS 1910353 1911210 . - 0 ID=cds-WJG95067.1;Parent=gene-PUW35_09365;Dbxref=NCBI_GP:WJG95067.1;Name=WJG95067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=PUW35_09365;product=aldo/keto reductase;protein_id=WJG95067.1;transl_table=11 CP118132.1 Genbank pseudogene 1911307 1912503 . - . ID=gene-PUW35_09370;Name=PUW35_09370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09370;pseudo=true CP118132.1 Protein Homology CDS 1911307 1912503 . - 0 ID=cds-PUW35_09370;Parent=gene-PUW35_09370;Note=frameshifted;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=PUW35_09370;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 1912732 1912977 . + . ID=gene-PUW35_09375;Name=PUW35_09375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09375;pseudo=true CP118132.1 Protein Homology CDS 1912732 1912977 . + 0 ID=cds-PUW35_09375;Parent=gene-PUW35_09375;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=PUW35_09375;product=diguanylate cyclase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1913027 1913545 . + . ID=gene-PUW35_09380;Name=PUW35_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09380 CP118132.1 Protein Homology CDS 1913027 1913545 . + 0 ID=cds-WJG95068.1;Parent=gene-PUW35_09380;Dbxref=NCBI_GP:WJG95068.1;Name=WJG95068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=PUW35_09380;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WJG95068.1;transl_table=11 CP118132.1 Genbank gene 1913542 1913649 . - . ID=gene-PUW35_09385;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=PUW35_09385 CP118132.1 Protein Homology CDS 1913542 1913649 . - 0 ID=cds-WJG94651.1;Parent=gene-PUW35_09385;Dbxref=NCBI_GP:WJG94651.1;Name=WJG94651.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=PUW35_09385;product=small membrane protein YoaI;protein_id=WJG94651.1;transl_table=11 CP118132.1 Genbank gene 1913855 1914301 . + . ID=gene-PUW35_09390;Name=PUW35_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09390 CP118132.1 Protein Homology CDS 1913855 1914301 . + 0 ID=cds-WJG94652.1;Parent=gene-PUW35_09390;Dbxref=NCBI_GP:WJG94652.1;Name=WJG94652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=PUW35_09390;product=DUF441 domain-containing protein;protein_id=WJG94652.1;transl_table=11 CP118132.1 Genbank gene 1914281 1915075 . - . ID=gene-PUW35_09395;Name=PUW35_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09395 CP118132.1 Protein Homology CDS 1914281 1915075 . - 0 ID=cds-WJG94653.1;Parent=gene-PUW35_09395;Dbxref=NCBI_GP:WJG94653.1;Name=WJG94653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=PUW35_09395;product=helix-turn-helix transcriptional regulator;protein_id=WJG94653.1;transl_table=11 CP118132.1 Genbank gene 1915176 1916360 . + . ID=gene-PUW35_09400;Name=PUW35_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09400 CP118132.1 Protein Homology CDS 1915176 1916360 . + 0 ID=cds-WJG94654.1;Parent=gene-PUW35_09400;Dbxref=NCBI_GP:WJG94654.1;Name=WJG94654.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=PUW35_09400;product=CynX/NimT family MFS transporter;protein_id=WJG94654.1;transl_table=11 CP118132.1 Genbank gene 1916479 1916826 . + . ID=gene-PUW35_09405;Name=PUW35_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09405 CP118132.1 Protein Homology CDS 1916479 1916826 . + 0 ID=cds-WJG94655.1;Parent=gene-PUW35_09405;Dbxref=NCBI_GP:WJG94655.1;Name=WJG94655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=PUW35_09405;product=DUF488 domain-containing protein;protein_id=WJG94655.1;transl_table=11 CP118132.1 Genbank gene 1916812 1917123 . - . ID=gene-PUW35_09410;Name=PUW35_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09410 CP118132.1 Protein Homology CDS 1916812 1917123 . - 0 ID=cds-WJG94656.1;Parent=gene-PUW35_09410;Dbxref=NCBI_GP:WJG94656.1;Name=WJG94656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=PUW35_09410;product=hypothetical protein;protein_id=WJG94656.1;transl_table=11 CP118132.1 Genbank gene 1917192 1917443 . - . ID=gene-PUW35_09415;Name=PUW35_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09415 CP118132.1 Protein Homology CDS 1917192 1917443 . - 0 ID=cds-WJG94657.1;Parent=gene-PUW35_09415;Dbxref=NCBI_GP:WJG94657.1;Name=WJG94657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=PUW35_09415;product=DUF333 domain-containing protein;protein_id=WJG94657.1;transl_table=11 CP118132.1 Genbank gene 1917639 1917737 . + . ID=gene-PUW35_09420;Name=PUW35_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09420 CP118132.1 Protein Homology CDS 1917639 1917737 . + 0 ID=cds-WJG94658.1;Parent=gene-PUW35_09420;Dbxref=NCBI_GP:WJG94658.1;Name=WJG94658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=PUW35_09420;product=YoaK family small membrane protein;protein_id=WJG94658.1;transl_table=11 CP118132.1 Genbank gene 1917876 1918124 . - . ID=gene-PUW35_09425;Name=PUW35_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09425 CP118132.1 Protein Homology CDS 1917876 1918124 . - 0 ID=cds-WJG94659.1;Parent=gene-PUW35_09425;Dbxref=NCBI_GP:WJG94659.1;Name=WJG94659.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=PUW35_09425;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WJG94659.1;transl_table=11 CP118132.1 Genbank gene 1918438 1919079 . - . ID=gene-PUW35_09430;Name=PUW35_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09430 CP118132.1 Protein Homology CDS 1918438 1919079 . - 0 ID=cds-WJG94660.1;Parent=gene-PUW35_09430;Dbxref=NCBI_GP:WJG94660.1;Name=WJG94660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=PUW35_09430;product=hypothetical protein;protein_id=WJG94660.1;transl_table=11 CP118132.1 Genbank gene 1919309 1919491 . - . ID=gene-PUW35_09435;Name=PUW35_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09435 CP118132.1 Protein Homology CDS 1919309 1919491 . - 0 ID=cds-WJG94661.1;Parent=gene-PUW35_09435;Dbxref=NCBI_GP:WJG94661.1;Name=WJG94661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=PUW35_09435;product=DUF1869 domain-containing protein;protein_id=WJG94661.1;transl_table=11 CP118132.1 Genbank gene 1919494 1919856 . - . ID=gene-PUW35_09440;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=PUW35_09440 CP118132.1 Protein Homology CDS 1919494 1919856 . - 0 ID=cds-WJG94662.1;Parent=gene-PUW35_09440;Dbxref=NCBI_GP:WJG94662.1;Name=WJG94662.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=PUW35_09440;product=DUF1971 domain-containing protein YeaR;protein_id=WJG94662.1;transl_table=11 CP118132.1 Genbank gene 1920029 1920667 . - . ID=gene-PUW35_09445;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=PUW35_09445 CP118132.1 Protein Homology CDS 1920029 1920667 . - 0 ID=cds-WJG94663.1;Parent=gene-PUW35_09445;Dbxref=NCBI_GP:WJG94663.1;Name=WJG94663.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=PUW35_09445;product=leucine efflux protein LeuE;protein_id=WJG94663.1;transl_table=11 CP118132.1 Genbank gene 1920864 1921409 . - . ID=gene-PUW35_09450;Name=PUW35_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09450 CP118132.1 Protein Homology CDS 1920864 1921409 . - 0 ID=cds-WJG94664.1;Parent=gene-PUW35_09450;Dbxref=NCBI_GP:WJG94664.1;Name=WJG94664.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=PUW35_09450;product=chorismate mutase;protein_id=WJG94664.1;transl_table=11 CP118132.1 Genbank pseudogene 1921492 1921646 . + . ID=gene-PUW35_09455;Name=PUW35_09455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09455;pseudo=true CP118132.1 Protein Homology CDS 1921492 1921646 . + 0 ID=cds-PUW35_09455;Parent=gene-PUW35_09455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=PUW35_09455;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1921725 1921973 . + . ID=gene-PUW35_09460;Name=PUW35_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09460 CP118132.1 Protein Homology CDS 1921725 1921973 . + 0 ID=cds-WJG94665.1;Parent=gene-PUW35_09460;Dbxref=NCBI_GP:WJG94665.1;Name=WJG94665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=PUW35_09460;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WJG94665.1;transl_table=11 CP118132.1 Genbank gene 1922227 1923075 . - . ID=gene-PUW35_09465;Name=PUW35_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09465 CP118132.1 Protein Homology CDS 1922227 1923075 . - 0 ID=cds-WJG94666.1;Parent=gene-PUW35_09465;Dbxref=NCBI_GP:WJG94666.1;Name=WJG94666.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=PUW35_09465;product=MerR family transcriptional regulator;protein_id=WJG94666.1;transl_table=11 CP118132.1 Genbank gene 1923144 1923737 . - . ID=gene-PUW35_09470;Name=PUW35_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09470 CP118132.1 Protein Homology CDS 1923144 1923737 . - 0 ID=cds-WJG95069.1;Parent=gene-PUW35_09470;Dbxref=NCBI_GP:WJG95069.1;Name=WJG95069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=PUW35_09470;product=helix-turn-helix transcriptional regulator;protein_id=WJG95069.1;transl_table=11 CP118132.1 Genbank gene 1923882 1924670 . - . ID=gene-PUW35_09475;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=PUW35_09475 CP118132.1 Protein Homology CDS 1923882 1924670 . - 0 ID=cds-WJG94667.1;Parent=gene-PUW35_09475;Dbxref=NCBI_GP:WJG94667.1;Name=WJG94667.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=PUW35_09475;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WJG94667.1;transl_table=11 CP118132.1 Genbank pseudogene 1924779 1925425 . - . ID=gene-PUW35_09480;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=pseudogene;locus_tag=PUW35_09480;pseudo=true CP118132.1 Protein Homology CDS 1924779 1925425 . - 0 ID=cds-PUW35_09480;Parent=gene-PUW35_09480;Note=frameshifted;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=PUW35_09480;product=metal-binding protein ZinT;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1925537 1925613 . - . ID=gene-PUW35_09485;Name=PUW35_09485;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_09485 CP118132.1 tRNAscan-SE tRNA 1925537 1925613 . - . ID=rna-PUW35_09485;Parent=gene-PUW35_09485;anticodon=(pos:complement(1925577..1925579));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_09485;product=tRNA-Arg CP118132.1 tRNAscan-SE exon 1925537 1925613 . - . ID=exon-PUW35_09485-1;Parent=rna-PUW35_09485;anticodon=(pos:complement(1925577..1925579));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_09485;product=tRNA-Arg CP118132.1 Genbank gene 1925622 1925948 . - . ID=gene-PUW35_09490;Name=PUW35_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09490 CP118132.1 Protein Homology CDS 1925622 1925948 . - 0 ID=cds-WJG94668.1;Parent=gene-PUW35_09490;Dbxref=NCBI_GP:WJG94668.1;Name=WJG94668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=PUW35_09490;product=four-helix bundle copper-binding protein;protein_id=WJG94668.1;transl_table=11 CP118132.1 Genbank pseudogene 1926142 1927274 . + . ID=gene-PUW35_09495;Name=PUW35_09495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09495;pseudo=true CP118132.1 Protein Homology CDS 1926142 1927274 . + 0 ID=cds-PUW35_09495;Parent=gene-PUW35_09495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=PUW35_09495;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1927355 1927945 . - . ID=gene-PUW35_09500;Name=PUW35_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09500 CP118132.1 Protein Homology CDS 1927355 1927945 . - 0 ID=cds-WJG94669.1;Parent=gene-PUW35_09500;Dbxref=NCBI_GP:WJG94669.1;Name=WJG94669.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=PUW35_09500;product=ATP-binding cassette domain-containing protein;protein_id=WJG94669.1;transl_table=11 CP118132.1 Genbank gene 1927939 1928736 . - . ID=gene-PUW35_09505;Name=PUW35_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09505 CP118132.1 Protein Homology CDS 1927939 1928736 . - 0 ID=cds-WJG94670.1;Parent=gene-PUW35_09505;Dbxref=NCBI_GP:WJG94670.1;Name=WJG94670.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=PUW35_09505;product=ATP-binding cassette domain-containing protein;protein_id=WJG94670.1;transl_table=11 CP118132.1 Genbank gene 1928730 1929542 . - . ID=gene-PUW35_09510;Name=PUW35_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09510 CP118132.1 Protein Homology CDS 1928730 1929542 . - 0 ID=cds-WJG94671.1;Parent=gene-PUW35_09510;Dbxref=NCBI_GP:WJG94671.1;Name=WJG94671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=PUW35_09510;product=ABC transporter permease;protein_id=WJG94671.1;transl_table=11 CP118132.1 Genbank gene 1929532 1930506 . - . ID=gene-PUW35_09515;Name=PUW35_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09515 CP118132.1 Protein Homology CDS 1929532 1930506 . - 0 ID=cds-WJG95070.1;Parent=gene-PUW35_09515;Dbxref=NCBI_GP:WJG95070.1;Name=WJG95070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=PUW35_09515;product=ABC transporter permease;protein_id=WJG95070.1;transl_table=11 CP118132.1 Genbank gene 1930506 1932140 . - . ID=gene-PUW35_09520;Name=PUW35_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09520 CP118132.1 Protein Homology CDS 1930506 1932140 . - 0 ID=cds-WJG95071.1;Parent=gene-PUW35_09520;Dbxref=NCBI_GP:WJG95071.1;Name=WJG95071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=PUW35_09520;product=ABC transporter substrate-binding protein;protein_id=WJG95071.1;transl_table=11 CP118132.1 Genbank gene 1932822 1933136 . + . ID=gene-PUW35_09525;Name=PUW35_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09525 CP118132.1 Protein Homology CDS 1932822 1933136 . + 0 ID=cds-WJG94672.1;Parent=gene-PUW35_09525;Dbxref=NCBI_GP:WJG94672.1;Name=WJG94672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=PUW35_09525;product=TRL-like family protein;protein_id=WJG94672.1;transl_table=11 CP118132.1 Genbank gene 1933285 1933815 . + . ID=gene-PUW35_09530;Name=PUW35_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09530 CP118132.1 Protein Homology CDS 1933285 1933815 . + 0 ID=cds-WJG94673.1;Parent=gene-PUW35_09530;Dbxref=NCBI_GP:WJG94673.1;Name=WJG94673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=PUW35_09530;product=cytochrome b;protein_id=WJG94673.1;transl_table=11 CP118132.1 Genbank gene 1933898 1934941 . - . ID=gene-PUW35_09535;Name=PUW35_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09535 CP118132.1 Protein Homology CDS 1933898 1934941 . - 0 ID=cds-WJG94674.1;Parent=gene-PUW35_09535;Dbxref=NCBI_GP:WJG94674.1;Name=WJG94674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=PUW35_09535;product=exo-alpha-sialidase;protein_id=WJG94674.1;transl_table=11 CP118132.1 Genbank gene 1935280 1935747 . - . ID=gene-PUW35_09540;Name=PUW35_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09540 CP118132.1 Protein Homology CDS 1935280 1935747 . - 0 ID=cds-WJG95072.1;Parent=gene-PUW35_09540;Dbxref=NCBI_GP:WJG95072.1;Name=WJG95072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=PUW35_09540;product=Hsp20 family protein;protein_id=WJG95072.1;transl_table=11 CP118132.1 Genbank gene 1935900 1936172 . - . ID=gene-PUW35_09545;Name=PUW35_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09545 CP118132.1 Protein Homology CDS 1935900 1936172 . - 0 ID=cds-WJG94675.1;Parent=gene-PUW35_09545;Dbxref=NCBI_GP:WJG94675.1;Name=WJG94675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=PUW35_09545;product=hypothetical protein;protein_id=WJG94675.1;transl_table=11 CP118132.1 Genbank gene 1936874 1937218 . + . ID=gene-PUW35_09550;Name=PUW35_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09550 CP118132.1 Protein Homology CDS 1936874 1937218 . + 0 ID=cds-WJG94676.1;Parent=gene-PUW35_09550;Dbxref=NCBI_GP:WJG94676.1;Name=WJG94676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=PUW35_09550;product=c-type lysozyme inhibitor;protein_id=WJG94676.1;transl_table=11 CP118132.1 Genbank gene 1937973 1938049 . - . ID=gene-PUW35_09555;Name=PUW35_09555;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_09555 CP118132.1 tRNAscan-SE tRNA 1937973 1938049 . - . ID=rna-PUW35_09555;Parent=gene-PUW35_09555;anticodon=(pos:complement(1938013..1938015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_09555;product=tRNA-Arg CP118132.1 tRNAscan-SE exon 1937973 1938049 . - . ID=exon-PUW35_09555-1;Parent=rna-PUW35_09555;anticodon=(pos:complement(1938013..1938015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_09555;product=tRNA-Arg CP118132.1 Genbank gene 1938440 1938997 . - . ID=gene-PUW35_09560;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=PUW35_09560 CP118132.1 Protein Homology CDS 1938440 1938997 . - 0 ID=cds-WJG94677.1;Parent=gene-PUW35_09560;Dbxref=NCBI_GP:WJG94677.1;Name=WJG94677.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=PUW35_09560;product=virulence membrane protein PagC;protein_id=WJG94677.1;transl_table=11 CP118132.1 Genbank gene 1939809 1940072 . + . ID=gene-PUW35_09565;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=PUW35_09565 CP118132.1 Protein Homology CDS 1939809 1940072 . + 0 ID=cds-WJG94678.1;Parent=gene-PUW35_09565;Dbxref=NCBI_GP:WJG94678.1;Name=WJG94678.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=PUW35_09565;product=virulence protein PagD;protein_id=WJG94678.1;transl_table=11 CP118132.1 Genbank pseudogene 1940204 1940405 . + . ID=gene-PUW35_09570;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=pseudogene;locus_tag=PUW35_09570;pseudo=true CP118132.1 Protein Homology CDS 1940204 1940405 . + 0 ID=cds-PUW35_09570;Parent=gene-PUW35_09570;Note=frameshifted;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=PUW35_09570;product=cold shock-like protein CspF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1940819 1941340 . + . ID=gene-PUW35_09575;Name=PUW35_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09575 CP118132.1 Protein Homology CDS 1940819 1941340 . + 0 ID=cds-WJG94679.1;Parent=gene-PUW35_09575;Dbxref=NCBI_GP:WJG94679.1;Name=WJG94679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=PUW35_09575;product=RICIN domain-containing protein;protein_id=WJG94679.1;transl_table=11 CP118132.1 Genbank gene 1941531 1941770 . + . ID=gene-PUW35_09580;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=PUW35_09580 CP118132.1 Protein Homology CDS 1941531 1941770 . + 0 ID=cds-WJG94680.1;Parent=gene-PUW35_09580;Dbxref=NCBI_GP:WJG94680.1;Name=WJG94680.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=PUW35_09580;product=virulence protein MsgA;protein_id=WJG94680.1;transl_table=11 CP118132.1 Genbank pseudogene 1942260 1943049 . + . ID=gene-PUW35_09585;Name=PUW35_09585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09585;pseudo=true CP118132.1 Protein Homology CDS 1942260 1943049 . + 0 ID=cds-PUW35_09585;Parent=gene-PUW35_09585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=PUW35_09585;product=lipoprotein EnvF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1944037 1945161 . - . ID=gene-PUW35_09590;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=PUW35_09590 CP118132.1 Protein Homology CDS 1944037 1945161 . - 0 ID=cds-WJG94681.1;Parent=gene-PUW35_09590;Dbxref=NCBI_GP:WJG94681.1;Name=WJG94681.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=PUW35_09590;product=type III secretion system effector SopF;protein_id=WJG94681.1;transl_table=11 CP118132.1 Genbank gene 1945622 1946872 . - . ID=gene-PUW35_09595;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=PUW35_09595 CP118132.1 Protein Homology CDS 1945622 1946872 . - 0 ID=cds-WJG94682.1;Parent=gene-PUW35_09595;Dbxref=NCBI_GP:WJG94682.1;Name=WJG94682.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=PUW35_09595;product=NADP-dependent isocitrate dehydrogenase;protein_id=WJG94682.1;transl_table=11 CP118132.1 Genbank gene 1947044 1947709 . + . ID=gene-PUW35_09600;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=PUW35_09600 CP118132.1 Protein Homology CDS 1947044 1947709 . + 0 ID=cds-WJG94683.1;Parent=gene-PUW35_09600;Dbxref=NCBI_GP:WJG94683.1;Name=WJG94683.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=PUW35_09600;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WJG94683.1;transl_table=11 CP118132.1 Genbank gene 1947706 1948035 . + . ID=gene-PUW35_09605;Name=PUW35_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09605 CP118132.1 Protein Homology CDS 1947706 1948035 . + 0 ID=cds-WJG94684.1;Parent=gene-PUW35_09605;Dbxref=NCBI_GP:WJG94684.1;Name=WJG94684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=PUW35_09605;product=hypothetical protein;protein_id=WJG94684.1;transl_table=11 CP118132.1 Genbank gene 1948047 1948508 . + . ID=gene-PUW35_09610;Name=PUW35_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09610 CP118132.1 Protein Homology CDS 1948047 1948508 . + 0 ID=cds-WJG94685.1;Parent=gene-PUW35_09610;Dbxref=NCBI_GP:WJG94685.1;Name=WJG94685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=PUW35_09610;product=NUDIX hydrolase;protein_id=WJG94685.1;transl_table=11 CP118132.1 Genbank gene 1948562 1949668 . + . ID=gene-PUW35_09615;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=PUW35_09615 CP118132.1 Protein Homology CDS 1948562 1949668 . + 0 ID=cds-WJG94686.1;Parent=gene-PUW35_09615;Dbxref=NCBI_GP:WJG94686.1;Name=WJG94686.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=PUW35_09615;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WJG94686.1;transl_table=11 CP118132.1 Genbank gene 1949755 1950396 . + . ID=gene-PUW35_09620;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=PUW35_09620 CP118132.1 Protein Homology CDS 1949755 1950396 . + 0 ID=cds-WJG94687.1;Parent=gene-PUW35_09620;Dbxref=NCBI_GP:WJG94687.1;Name=WJG94687.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=PUW35_09620;product=high frequency lysogenization protein HflD;protein_id=WJG94687.1;transl_table=11 CP118132.1 Genbank pseudogene 1950400 1951769 . + . ID=gene-PUW35_09625;Name=purB;gbkey=Gene;gene=purB;gene_biotype=pseudogene;locus_tag=PUW35_09625;pseudo=true CP118132.1 Protein Homology CDS 1950400 1951769 . + 0 ID=cds-PUW35_09625;Parent=gene-PUW35_09625;Note=frameshifted;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=PUW35_09625;product=adenylosuccinate lyase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1951896 1952567 . + . ID=gene-PUW35_09630;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=PUW35_09630 CP118132.1 Protein Homology CDS 1951896 1952567 . + 0 ID=cds-WJG95073.1;Parent=gene-PUW35_09630;Dbxref=NCBI_GP:WJG95073.1;Name=WJG95073.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=PUW35_09630;product=two-component system response regulator PhoP;protein_id=WJG95073.1;transl_table=11 CP118132.1 Genbank gene 1952567 1954030 . + . ID=gene-PUW35_09635;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=PUW35_09635 CP118132.1 Protein Homology CDS 1952567 1954030 . + 0 ID=cds-WJG94688.1;Parent=gene-PUW35_09635;Dbxref=NCBI_GP:WJG94688.1;Name=WJG94688.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=PUW35_09635;product=two-component system sensor histidine kinase PhoQ;protein_id=WJG94688.1;transl_table=11 CP118132.1 Genbank gene 1954111 1955232 . + . ID=gene-PUW35_09640;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=PUW35_09640 CP118132.1 Protein Homology CDS 1954111 1955232 . + 0 ID=cds-WJG94689.1;Parent=gene-PUW35_09640;Dbxref=NCBI_GP:WJG94689.1;Name=WJG94689.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=PUW35_09640;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WJG94689.1;transl_table=11 CP118132.1 Genbank gene 1955272 1956606 . - . ID=gene-PUW35_09645;Name=PUW35_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09645 CP118132.1 Protein Homology CDS 1955272 1956606 . - 0 ID=cds-WJG94690.1;Parent=gene-PUW35_09645;Dbxref=NCBI_GP:WJG94690.1;Name=WJG94690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=PUW35_09645;product=hypothetical protein;protein_id=WJG94690.1;transl_table=11 CP118132.1 Genbank gene 1956610 1957839 . - . ID=gene-PUW35_09650;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=PUW35_09650 CP118132.1 Protein Homology CDS 1956610 1957839 . - 0 ID=cds-WJG94691.1;Parent=gene-PUW35_09650;Dbxref=NCBI_GP:WJG94691.1;Name=WJG94691.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=PUW35_09650;product=peptidase T;protein_id=WJG94691.1;transl_table=11 CP118132.1 Genbank gene 1958090 1959226 . + . ID=gene-PUW35_09655;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=PUW35_09655 CP118132.1 Protein Homology CDS 1958090 1959226 . + 0 ID=cds-WJG94692.1;Parent=gene-PUW35_09655;Dbxref=NCBI_GP:WJG94692.1;Name=WJG94692.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=PUW35_09655;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WJG94692.1;transl_table=11 CP118132.1 Genbank gene 1959210 1960073 . + . ID=gene-PUW35_09660;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=PUW35_09660 CP118132.1 Protein Homology CDS 1959210 1960073 . + 0 ID=cds-WJG94693.1;Parent=gene-PUW35_09660;Dbxref=NCBI_GP:WJG94693.1;Name=WJG94693.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=PUW35_09660;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WJG94693.1;transl_table=11 CP118132.1 Genbank gene 1960402 1961412 . + . ID=gene-PUW35_09665;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=PUW35_09665 CP118132.1 Protein Homology CDS 1960402 1961412 . + 0 ID=cds-WJG94694.1;Parent=gene-PUW35_09665;Dbxref=NCBI_GP:WJG94694.1;Name=WJG94694.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=PUW35_09665;product=SPI-2 type III secretion system effector SifA;protein_id=WJG94694.1;transl_table=11 CP118132.1 Genbank gene 1961503 1961673 . + . ID=gene-PUW35_09670;Name=PUW35_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09670 CP118132.1 GeneMarkS-2+ CDS 1961503 1961673 . + 0 ID=cds-WJG94695.1;Parent=gene-PUW35_09670;Dbxref=NCBI_GP:WJG94695.1;Name=WJG94695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_09670;product=hypothetical protein;protein_id=WJG94695.1;transl_table=11 CP118132.1 Genbank gene 1961729 1962508 . + . ID=gene-PUW35_09675;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=PUW35_09675 CP118132.1 Protein Homology CDS 1961729 1962508 . + 0 ID=cds-WJG94696.1;Parent=gene-PUW35_09675;Dbxref=NCBI_GP:WJG94696.1;Name=WJG94696.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=PUW35_09675;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WJG94696.1;transl_table=11 CP118132.1 Genbank gene 1962533 1963579 . + . ID=gene-PUW35_09680;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=PUW35_09680 CP118132.1 Protein Homology CDS 1962533 1963579 . + 0 ID=cds-WJG94697.1;Parent=gene-PUW35_09680;Dbxref=NCBI_GP:WJG94697.1;Name=WJG94697.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=PUW35_09680;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WJG94697.1;transl_table=11 CP118132.1 Genbank gene 1963661 1964482 . - . ID=gene-PUW35_09685;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=PUW35_09685 CP118132.1 Protein Homology CDS 1963661 1964482 . - 0 ID=cds-WJG94698.1;Parent=gene-PUW35_09685;Dbxref=NCBI_GP:WJG94698.1;Name=WJG94698.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=PUW35_09685;product=NAD-dependent protein deacylase;protein_id=WJG94698.1;transl_table=11 CP118132.1 Genbank gene 1964501 1965412 . - . ID=gene-PUW35_09690;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=PUW35_09690 CP118132.1 Protein Homology CDS 1964501 1965412 . - 0 ID=cds-WJG94699.1;Parent=gene-PUW35_09690;Dbxref=NCBI_GP:WJG94699.1;Name=WJG94699.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=PUW35_09690;product=N-acetylglucosamine kinase;protein_id=WJG94699.1;transl_table=11 CP118132.1 Genbank gene 1965441 1966685 . - . ID=gene-PUW35_09695;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=PUW35_09695 CP118132.1 Protein Homology CDS 1965441 1966685 . - 0 ID=cds-WJG94700.1;Parent=gene-PUW35_09695;Dbxref=NCBI_GP:WJG94700.1;Name=WJG94700.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=PUW35_09695;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WJG94700.1;transl_table=11 CP118132.1 Genbank gene 1966685 1967386 . - . ID=gene-PUW35_09700;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=PUW35_09700 CP118132.1 Protein Homology CDS 1966685 1967386 . - 0 ID=cds-WJG94701.1;Parent=gene-PUW35_09700;Dbxref=NCBI_GP:WJG94701.1;Name=WJG94701.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=PUW35_09700;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WJG94701.1;transl_table=11 CP118132.1 Genbank gene 1967379 1968578 . - . ID=gene-PUW35_09705;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=PUW35_09705 CP118132.1 Protein Homology CDS 1967379 1968578 . - 0 ID=cds-WJG94702.1;Parent=gene-PUW35_09705;Dbxref=NCBI_GP:WJG94702.1;Name=WJG94702.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=PUW35_09705;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WJG94702.1;transl_table=11 CP118132.1 Genbank gene 1968916 1972362 . + . ID=gene-PUW35_09710;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=PUW35_09710 CP118132.1 Protein Homology CDS 1968916 1972362 . + 0 ID=cds-WJG94703.1;Parent=gene-PUW35_09710;Dbxref=NCBI_GP:WJG94703.1;Name=WJG94703.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=PUW35_09710;product=transcription-repair coupling factor;protein_id=WJG94703.1;transl_table=11 CP118132.1 Genbank gene 1972510 1973475 . + . ID=gene-PUW35_09715;Name=PUW35_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09715 CP118132.1 Protein Homology CDS 1972510 1973475 . + 0 ID=cds-WJG94704.1;Parent=gene-PUW35_09715;Dbxref=NCBI_GP:WJG94704.1;Name=WJG94704.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=PUW35_09715;product=L%2CD-transpeptidase family protein;protein_id=WJG94704.1;transl_table=11 CP118132.1 Genbank gene 1973572 1973829 . - . ID=gene-PUW35_09720;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ycfR;locus_tag=PUW35_09720 CP118132.1 Protein Homology CDS 1973572 1973829 . - 0 ID=cds-WJG94705.1;Parent=gene-PUW35_09720;Dbxref=NCBI_GP:WJG94705.1;Name=WJG94705.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=PUW35_09720;product=multiple stress resistance protein BhsA;protein_id=WJG94705.1;transl_table=11 CP118132.1 Genbank gene 1974071 1974706 . + . ID=gene-PUW35_09725;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=PUW35_09725 CP118132.1 Protein Homology CDS 1974071 1974706 . + 0 ID=cds-WJG94706.1;Parent=gene-PUW35_09725;Dbxref=NCBI_GP:WJG94706.1;Name=WJG94706.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=PUW35_09725;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WJG94706.1;transl_table=11 CP118132.1 Genbank pseudogene 1974780 1975296 . - . ID=gene-PUW35_09730;Name=PUW35_09730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09730;pseudo=true CP118132.1 Protein Homology CDS 1974780 1975296 . - 0 ID=cds-PUW35_09730;Parent=gene-PUW35_09730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=PUW35_09730;product=glycine zipper 2TM domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 1975475 1976779 . - . ID=gene-PUW35_09735;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=PUW35_09735 CP118132.1 Protein Homology CDS 1975475 1976779 . - 0 ID=cds-WJG94707.1;Parent=gene-PUW35_09735;Dbxref=NCBI_GP:WJG94707.1;Name=WJG94707.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=PUW35_09735;product=NADH-quinone dehydrogenase;protein_id=WJG94707.1;transl_table=11 CP118132.1 Genbank gene 1977034 1977576 . - . ID=gene-PUW35_09740;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=PUW35_09740 CP118132.1 Protein Homology CDS 1977034 1977576 . - 0 ID=cds-WJG94708.1;Parent=gene-PUW35_09740;Dbxref=NCBI_GP:WJG94708.1;Name=WJG94708.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=PUW35_09740;product=alpha/beta hydrolase YcfP;protein_id=WJG94708.1;transl_table=11 CP118132.1 Genbank gene 1977601 1978626 . - . ID=gene-PUW35_09745;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=PUW35_09745 CP118132.1 Protein Homology CDS 1977601 1978626 . - 0 ID=cds-WJG94709.1;Parent=gene-PUW35_09745;Dbxref=NCBI_GP:WJG94709.1;Name=WJG94709.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=PUW35_09745;product=beta-N-acetylhexosaminidase;protein_id=WJG94709.1;transl_table=11 CP118132.1 Genbank gene 1978637 1979461 . - . ID=gene-PUW35_09750;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=PUW35_09750 CP118132.1 Protein Homology CDS 1978637 1979461 . - 0 ID=cds-WJG94710.1;Parent=gene-PUW35_09750;Dbxref=NCBI_GP:WJG94710.1;Name=WJG94710.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=PUW35_09750;product=thiamine kinase;protein_id=WJG94710.1;transl_table=11 CP118132.1 Genbank gene 1979442 1980080 . - . ID=gene-PUW35_09755;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=PUW35_09755 CP118132.1 Protein Homology CDS 1979442 1980080 . - 0 ID=cds-WJG94711.1;Parent=gene-PUW35_09755;Dbxref=NCBI_GP:WJG94711.1;Name=WJG94711.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=PUW35_09755;product=penicillin-binding protein activator LpoB;protein_id=WJG94711.1;transl_table=11 CP118132.1 Genbank gene 1980094 1980468 . - . ID=gene-PUW35_09760;Name=PUW35_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09760 CP118132.1 Protein Homology CDS 1980094 1980468 . - 0 ID=cds-WJG94712.1;Parent=gene-PUW35_09760;Dbxref=NCBI_GP:WJG94712.1;Name=WJG94712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=PUW35_09760;product=YcfL family protein;protein_id=WJG94712.1;transl_table=11 CP118132.1 Genbank gene 1980471 1980830 . - . ID=gene-PUW35_09765;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=PUW35_09765 CP118132.1 Protein Homology CDS 1980471 1980830 . - 0 ID=cds-WJG94713.1;Parent=gene-PUW35_09765;Dbxref=NCBI_GP:WJG94713.1;Name=WJG94713.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=PUW35_09765;product=purine nucleoside phosphoramidase;protein_id=WJG94713.1;transl_table=11 CP118132.1 Genbank gene 1981172 1983346 . + . ID=gene-PUW35_09770;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=PUW35_09770 CP118132.1 Protein Homology CDS 1981172 1983346 . + 0 ID=cds-WJG94714.1;Parent=gene-PUW35_09770;Dbxref=NCBI_GP:WJG94714.1;Name=WJG94714.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=PUW35_09770;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WJG94714.1;transl_table=11 CP118132.1 Genbank gene 1983431 1984864 . - . ID=gene-PUW35_09775;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=PUW35_09775 CP118132.1 Protein Homology CDS 1983431 1984864 . - 0 ID=cds-WJG94715.1;Parent=gene-PUW35_09775;Dbxref=NCBI_GP:WJG94715.1;Name=WJG94715.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=PUW35_09775;product=PTS glucose transporter subunit IIBC;protein_id=WJG94715.1;transl_table=11 CP118132.1 Genbank gene 1985159 1985956 . - . ID=gene-PUW35_09780;Name=PUW35_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09780 CP118132.1 Protein Homology CDS 1985159 1985956 . - 0 ID=cds-WJG94716.1;Parent=gene-PUW35_09780;Dbxref=NCBI_GP:WJG94716.1;Name=WJG94716.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=PUW35_09780;product=metal-dependent hydrolase;protein_id=WJG94716.1;transl_table=11 CP118132.1 Genbank gene 1985967 1986971 . - . ID=gene-PUW35_09785;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=PUW35_09785 CP118132.1 Protein Homology CDS 1985967 1986971 . - 0 ID=cds-WJG94717.1;Parent=gene-PUW35_09785;Dbxref=NCBI_GP:WJG94717.1;Name=WJG94717.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=PUW35_09785;product=DNA polymerase III subunit delta';protein_id=WJG94717.1;transl_table=11 CP118132.1 Genbank gene 1986968 1987609 . - . ID=gene-PUW35_09790;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=PUW35_09790 CP118132.1 Protein Homology CDS 1986968 1987609 . - 0 ID=cds-WJG94718.1;Parent=gene-PUW35_09790;Dbxref=NCBI_GP:WJG94718.1;Name=WJG94718.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=PUW35_09790;product=dTMP kinase;protein_id=WJG94718.1;transl_table=11 CP118132.1 Genbank gene 1987599 1988621 . - . ID=gene-PUW35_09795;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=PUW35_09795 CP118132.1 Protein Homology CDS 1987599 1988621 . - 0 ID=cds-WJG94719.1;Parent=gene-PUW35_09795;Dbxref=NCBI_GP:WJG94719.1;Name=WJG94719.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=PUW35_09795;product=cell division protein YceG;protein_id=WJG94719.1;transl_table=11 CP118132.1 Genbank gene 1988624 1989433 . - . ID=gene-PUW35_09800;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=PUW35_09800 CP118132.1 Protein Homology CDS 1988624 1989433 . - 0 ID=cds-WJG94720.1;Parent=gene-PUW35_09800;Dbxref=NCBI_GP:WJG94720.1;Name=WJG94720.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=PUW35_09800;product=aminodeoxychorismate lyase;protein_id=WJG94720.1;transl_table=11 CP118132.1 Genbank gene 1989557 1990798 . - . ID=gene-PUW35_09805;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=PUW35_09805 CP118132.1 Protein Homology CDS 1989557 1990798 . - 0 ID=cds-WJG94721.1;Parent=gene-PUW35_09805;Dbxref=NCBI_GP:WJG94721.1;Name=WJG94721.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=PUW35_09805;product=beta-ketoacyl-ACP synthase II;protein_id=WJG94721.1;transl_table=11 CP118132.1 Genbank gene 1990884 1991120 . - . ID=gene-PUW35_09810;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=PUW35_09810 CP118132.1 Protein Homology CDS 1990884 1991120 . - 0 ID=cds-WJG94722.1;Parent=gene-PUW35_09810;Dbxref=NCBI_GP:WJG94722.1;Name=WJG94722.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=PUW35_09810;product=acyl carrier protein;protein_id=WJG94722.1;transl_table=11 CP118132.1 Genbank gene 1991276 1992010 . - . ID=gene-PUW35_09815;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PUW35_09815 CP118132.1 Protein Homology CDS 1991276 1992010 . - 0 ID=cds-WJG94723.1;Parent=gene-PUW35_09815;Dbxref=NCBI_GP:WJG94723.1;Name=WJG94723.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=PUW35_09815;product=3-oxoacyl-ACP reductase FabG;protein_id=WJG94723.1;transl_table=11 CP118132.1 Genbank gene 1992023 1992952 . - . ID=gene-PUW35_09820;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=PUW35_09820 CP118132.1 Protein Homology CDS 1992023 1992952 . - 0 ID=cds-WJG94724.1;Parent=gene-PUW35_09820;Dbxref=NCBI_GP:WJG94724.1;Name=WJG94724.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=PUW35_09820;product=ACP S-malonyltransferase;protein_id=WJG94724.1;transl_table=11 CP118132.1 Genbank gene 1992968 1993921 . - . ID=gene-PUW35_09825;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=PUW35_09825 CP118132.1 Protein Homology CDS 1992968 1993921 . - 0 ID=cds-WJG94725.1;Parent=gene-PUW35_09825;Dbxref=NCBI_GP:WJG94725.1;Name=WJG94725.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=PUW35_09825;product=beta-ketoacyl-ACP synthase III;protein_id=WJG94725.1;transl_table=11 CP118132.1 Genbank gene 1994001 1995080 . - . ID=gene-PUW35_09830;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=PUW35_09830 CP118132.1 Protein Homology CDS 1994001 1995080 . - 0 ID=cds-WJG94726.1;Parent=gene-PUW35_09830;Dbxref=NCBI_GP:WJG94726.1;Name=WJG94726.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=PUW35_09830;product=phosphate acyltransferase PlsX;protein_id=WJG94726.1;transl_table=11 CP118132.1 Genbank gene 1995214 1995387 . - . ID=gene-PUW35_09835;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=PUW35_09835 CP118132.1 Protein Homology CDS 1995214 1995387 . - 0 ID=cds-WJG94727.1;Parent=gene-PUW35_09835;Dbxref=NCBI_GP:WJG94727.1;Name=WJG94727.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=PUW35_09835;product=50S ribosomal protein L32;protein_id=WJG94727.1;transl_table=11 CP118132.1 Genbank gene 1995439 1995960 . - . ID=gene-PUW35_09840;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=PUW35_09840 CP118132.1 Protein Homology CDS 1995439 1995960 . - 0 ID=cds-WJG94728.1;Parent=gene-PUW35_09840;Dbxref=NCBI_GP:WJG94728.1;Name=WJG94728.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=PUW35_09840;product=23S rRNA accumulation protein YceD;protein_id=WJG94728.1;transl_table=11 CP118132.1 Genbank gene 1996158 1996742 . + . ID=gene-PUW35_09845;Name=PUW35_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09845 CP118132.1 Protein Homology CDS 1996158 1996742 . + 0 ID=cds-WJG94729.1;Parent=gene-PUW35_09845;Dbxref=NCBI_GP:WJG94729.1;Name=WJG94729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=PUW35_09845;product=Maf family protein;protein_id=WJG94729.1;transl_table=11 CP118132.1 Genbank gene 1996813 1997037 . - . ID=gene-PUW35_09850;Name=PUW35_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09850 CP118132.1 GeneMarkS-2+ CDS 1996813 1997037 . - 0 ID=cds-WJG94730.1;Parent=gene-PUW35_09850;Dbxref=NCBI_GP:WJG94730.1;Name=WJG94730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_09850;product=hypothetical protein;protein_id=WJG94730.1;transl_table=11 CP118132.1 Genbank gene 1997240 1997983 . - . ID=gene-PUW35_09855;Name=PUW35_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09855 CP118132.1 Protein Homology CDS 1997240 1997983 . - 0 ID=cds-WJG95074.1;Parent=gene-PUW35_09855;Dbxref=NCBI_GP:WJG95074.1;Name=WJG95074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=PUW35_09855;product=DUF3053 domain-containing protein;protein_id=WJG95074.1;transl_table=11 CP118132.1 Genbank gene 1998139 1999098 . - . ID=gene-PUW35_09860;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=PUW35_09860 CP118132.1 Protein Homology CDS 1998139 1999098 . - 0 ID=cds-WJG94731.1;Parent=gene-PUW35_09860;Dbxref=NCBI_GP:WJG94731.1;Name=WJG94731.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=PUW35_09860;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WJG94731.1;transl_table=11 CP118132.1 Genbank pseudogene 1999672 2002877 . + . ID=gene-PUW35_09865;Name=rne;gbkey=Gene;gene=rne;gene_biotype=pseudogene;locus_tag=PUW35_09865;pseudo=true CP118132.1 Protein Homology CDS 1999672 2002877 . + 0 ID=cds-PUW35_09865;Parent=gene-PUW35_09865;Note=frameshifted;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=PUW35_09865;product=ribonuclease E;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2003124 2004077 . - . ID=gene-PUW35_09870;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=PUW35_09870 CP118132.1 Protein Homology CDS 2003124 2004077 . - 0 ID=cds-WJG94732.1;Parent=gene-PUW35_09870;Dbxref=NCBI_GP:WJG94732.1;Name=WJG94732.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=PUW35_09870;product=flagellar hook-associated protein FlgL;protein_id=WJG94732.1;transl_table=11 CP118132.1 Genbank pseudogene 2004092 2005753 . - . ID=gene-PUW35_09875;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=pseudogene;locus_tag=PUW35_09875;pseudo=true CP118132.1 Protein Homology CDS 2004092 2005753 . - 0 ID=cds-PUW35_09875;Parent=gene-PUW35_09875;Note=internal stop;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=PUW35_09875;product=flagellar hook-associated protein FlgK;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2005818 2006768 . - . ID=gene-PUW35_09880;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=PUW35_09880 CP118132.1 Protein Homology CDS 2005818 2006768 . - 0 ID=cds-WJG94733.1;Parent=gene-PUW35_09880;Dbxref=NCBI_GP:WJG94733.1;Name=WJG94733.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=PUW35_09880;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WJG94733.1;transl_table=11 CP118132.1 Genbank pseudogene 2006768 2007865 . - . ID=gene-PUW35_09885;Name=PUW35_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09885;pseudo=true CP118132.1 Protein Homology CDS 2006768 2007865 . - 0 ID=cds-PUW35_09885;Parent=gene-PUW35_09885;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=PUW35_09885;product=flagellar basal body P-ring protein FlgI;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2007877 2008575 . - . ID=gene-PUW35_09890;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=PUW35_09890 CP118132.1 Protein Homology CDS 2007877 2008575 . - 0 ID=cds-WJG94734.1;Parent=gene-PUW35_09890;Dbxref=NCBI_GP:WJG94734.1;Name=WJG94734.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=PUW35_09890;product=flagellar basal body L-ring protein FlgH;protein_id=WJG94734.1;transl_table=11 CP118132.1 Genbank gene 2008630 2009412 . - . ID=gene-PUW35_09895;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=PUW35_09895 CP118132.1 Protein Homology CDS 2008630 2009412 . - 0 ID=cds-WJG94735.1;Parent=gene-PUW35_09895;Dbxref=NCBI_GP:WJG94735.1;Name=WJG94735.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=PUW35_09895;product=flagellar basal-body rod protein FlgG;protein_id=WJG94735.1;transl_table=11 CP118132.1 Genbank gene 2009426 2010181 . - . ID=gene-PUW35_09900;Name=PUW35_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09900 CP118132.1 Protein Homology CDS 2009426 2010181 . - 0 ID=cds-WJG94736.1;Parent=gene-PUW35_09900;Dbxref=NCBI_GP:WJG94736.1;Name=WJG94736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=PUW35_09900;product=flagellar basal body rod protein FlgF;protein_id=WJG94736.1;transl_table=11 CP118132.1 Genbank gene 2010202 2011413 . - . ID=gene-PUW35_09905;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=PUW35_09905 CP118132.1 Protein Homology CDS 2010202 2011413 . - 0 ID=cds-WJG94737.1;Parent=gene-PUW35_09905;Dbxref=NCBI_GP:WJG94737.1;Name=WJG94737.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=PUW35_09905;product=flagellar hook protein FlgE;protein_id=WJG94737.1;transl_table=11 CP118132.1 Genbank gene 2011440 2012138 . - . ID=gene-PUW35_09910;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=PUW35_09910 CP118132.1 Protein Homology CDS 2011440 2012138 . - 0 ID=cds-WJG94738.1;Parent=gene-PUW35_09910;Dbxref=NCBI_GP:WJG94738.1;Name=WJG94738.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=PUW35_09910;product=flagellar hook assembly protein FlgD;protein_id=WJG94738.1;transl_table=11 CP118132.1 Genbank gene 2012150 2012554 . - . ID=gene-PUW35_09915;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=PUW35_09915 CP118132.1 Protein Homology CDS 2012150 2012554 . - 0 ID=cds-WJG94739.1;Parent=gene-PUW35_09915;Dbxref=NCBI_GP:WJG94739.1;Name=WJG94739.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=PUW35_09915;product=flagellar basal body rod protein FlgC;protein_id=WJG94739.1;transl_table=11 CP118132.1 Genbank gene 2012558 2012974 . - . ID=gene-PUW35_09920;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=PUW35_09920 CP118132.1 Protein Homology CDS 2012558 2012974 . - 0 ID=cds-WJG94740.1;Parent=gene-PUW35_09920;Dbxref=NCBI_GP:WJG94740.1;Name=WJG94740.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=PUW35_09920;product=flagellar basal body rod protein FlgB;protein_id=WJG94740.1;transl_table=11 CP118132.1 Genbank gene 2013131 2013790 . + . ID=gene-PUW35_09925;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=PUW35_09925 CP118132.1 Protein Homology CDS 2013131 2013790 . + 0 ID=cds-WJG94741.1;Parent=gene-PUW35_09925;Dbxref=NCBI_GP:WJG94741.1;Name=WJG94741.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=PUW35_09925;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WJG94741.1;transl_table=11 CP118132.1 Genbank gene 2013882 2014175 . + . ID=gene-PUW35_09930;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=PUW35_09930 CP118132.1 Protein Homology CDS 2013882 2014175 . + 0 ID=cds-WJG94742.1;Parent=gene-PUW35_09930;Dbxref=NCBI_GP:WJG94742.1;Name=WJG94742.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=PUW35_09930;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WJG94742.1;transl_table=11 CP118132.1 Genbank gene 2014180 2014602 . + . ID=gene-PUW35_09935;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=PUW35_09935 CP118132.1 Protein Homology CDS 2014180 2014602 . + 0 ID=cds-WJG94743.1;Parent=gene-PUW35_09935;Dbxref=NCBI_GP:WJG94743.1;Name=WJG94743.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=PUW35_09935;product=flagella biosynthesis chaperone FlgN;protein_id=WJG94743.1;transl_table=11 CP118132.1 Genbank gene 2014684 2016219 . - . ID=gene-PUW35_09940;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=PUW35_09940 CP118132.1 Protein Homology CDS 2014684 2016219 . - 0 ID=cds-WJG94744.1;Parent=gene-PUW35_09940;Dbxref=NCBI_GP:WJG94744.1;Name=WJG94744.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=PUW35_09940;product=murein biosynthesis integral membrane protein MurJ;protein_id=WJG94744.1;transl_table=11 CP118132.1 Genbank gene 2016523 2017446 . - . ID=gene-PUW35_09945;Name=PUW35_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09945 CP118132.1 Protein Homology CDS 2016523 2017446 . - 0 ID=cds-WJG94745.1;Parent=gene-PUW35_09945;Dbxref=NCBI_GP:WJG94745.1;Name=WJG94745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=PUW35_09945;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WJG94745.1;transl_table=11 CP118132.1 Genbank pseudogene 2017448 2018094 . - . ID=gene-PUW35_09950;Name=PUW35_09950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09950;pseudo=true CP118132.1 Protein Homology CDS 2017448 2018094 . - 0 ID=cds-PUW35_09950;Parent=gene-PUW35_09950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=PUW35_09950;product=YceH family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2018130 2018714 . - . ID=gene-PUW35_09955;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=PUW35_09955 CP118132.1 Protein Homology CDS 2018130 2018714 . - 0 ID=cds-WJG94746.1;Parent=gene-PUW35_09955;Dbxref=NCBI_GP:WJG94746.1;Name=WJG94746.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=PUW35_09955;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WJG94746.1;transl_table=11 CP118132.1 Genbank gene 2018951 2020159 . + . ID=gene-PUW35_09960;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=PUW35_09960 CP118132.1 Protein Homology CDS 2018951 2020159 . + 0 ID=cds-WJG94747.1;Parent=gene-PUW35_09960;Dbxref=NCBI_GP:WJG94747.1;Name=WJG94747.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=PUW35_09960;product=multidrug efflux MFS transporter MdtH;protein_id=WJG94747.1;transl_table=11 CP118132.1 Genbank pseudogene 2020223 2020869 . + . ID=gene-PUW35_09965;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=pseudogene;locus_tag=PUW35_09965;pseudo=true CP118132.1 Protein Homology CDS 2020223 2020869 . + 0 ID=cds-PUW35_09965;Parent=gene-PUW35_09965;Note=frameshifted;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=PUW35_09965;product=glutaredoxin 2;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2021010 2021555 . + . ID=gene-PUW35_09970;Name=PUW35_09970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_09970;pseudo=true CP118132.1 Protein Homology CDS 2021010 2021555 . + 0 ID=cds-PUW35_09970;Parent=gene-PUW35_09970;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=PUW35_09970;product=lipoprotein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2021660 2022706 . + . ID=gene-PUW35_09975;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=PUW35_09975 CP118132.1 Protein Homology CDS 2021660 2022706 . + 0 ID=cds-WJG94748.1;Parent=gene-PUW35_09975;Dbxref=NCBI_GP:WJG94748.1;Name=WJG94748.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=PUW35_09975;product=dihydroorotase;protein_id=WJG94748.1;transl_table=11 CP118132.1 Genbank gene 2022780 2023025 . + . ID=gene-PUW35_09980;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=PUW35_09980 CP118132.1 Protein Homology CDS 2022780 2023025 . + 0 ID=cds-WJG94749.1;Parent=gene-PUW35_09980;Dbxref=NCBI_GP:WJG94749.1;Name=WJG94749.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=PUW35_09980;product=DNA damage-inducible protein I;protein_id=WJG94749.1;transl_table=11 CP118132.1 Genbank gene 2023315 2023569 . + . ID=gene-PUW35_09985;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=PUW35_09985 CP118132.1 Protein Homology CDS 2023315 2023569 . + 0 ID=cds-WJG95075.1;Parent=gene-PUW35_09985;Dbxref=NCBI_GP:WJG95075.1;Name=WJG95075.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=PUW35_09985;product=biofilm formation regulator BssS;protein_id=WJG95075.1;transl_table=11 CP118132.1 Genbank gene 2023682 2024800 . + . ID=gene-PUW35_09990;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=PUW35_09990 CP118132.1 Protein Homology CDS 2023682 2024800 . + 0 ID=cds-WJG94750.1;Parent=gene-PUW35_09990;Dbxref=NCBI_GP:WJG94750.1;Name=WJG94750.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=PUW35_09990;product=N-methyl-L-tryptophan oxidase;protein_id=WJG94750.1;transl_table=11 CP118132.1 Genbank gene 2024841 2024954 . + . ID=gene-PUW35_09995;Name=PUW35_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_09995 CP118132.1 Protein Homology CDS 2024841 2024954 . + 0 ID=cds-WJG94751.1;Parent=gene-PUW35_09995;Dbxref=NCBI_GP:WJG94751.1;Name=WJG94751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=PUW35_09995;product=YceO family protein;protein_id=WJG94751.1;transl_table=11 CP118132.1 Genbank gene 2025217 2025789 . + . ID=gene-PUW35_10000;Name=PUW35_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10000 CP118132.1 Protein Homology CDS 2025217 2025789 . + 0 ID=cds-WJG94752.1;Parent=gene-PUW35_10000;Dbxref=NCBI_GP:WJG94752.1;Name=WJG94752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=PUW35_10000;product=cytochrome b;protein_id=WJG94752.1;transl_table=11 CP118132.1 Genbank gene 2025786 2026361 . + . ID=gene-PUW35_10005;Name=PUW35_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10005 CP118132.1 Protein Homology CDS 2025786 2026361 . + 0 ID=cds-WJG94753.1;Parent=gene-PUW35_10005;Dbxref=NCBI_GP:WJG94753.1;Name=WJG94753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=PUW35_10005;product=YceI family protein;protein_id=WJG94753.1;transl_table=11 CP118132.1 Genbank gene 2026413 2027465 . - . ID=gene-PUW35_10010;Name=PUW35_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10010 CP118132.1 Protein Homology CDS 2026413 2027465 . - 0 ID=cds-WJG94754.1;Parent=gene-PUW35_10010;Dbxref=NCBI_GP:WJG94754.1;Name=WJG94754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=PUW35_10010;product=rhodanese-related sulfurtransferase;protein_id=WJG94754.1;transl_table=11 CP118132.1 Genbank gene 2027685 2028605 . + . ID=gene-PUW35_10015;Name=PUW35_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10015 CP118132.1 Protein Homology CDS 2027685 2028605 . + 0 ID=cds-WJG94755.1;Parent=gene-PUW35_10015;Dbxref=NCBI_GP:WJG94755.1;Name=WJG94755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=PUW35_10015;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WJG94755.1;transl_table=11 CP118132.1 Genbank gene 2028760 2029974 . + . ID=gene-PUW35_10020;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=PUW35_10020 CP118132.1 Protein Homology CDS 2028760 2029974 . + 0 ID=cds-WJG94756.1;Parent=gene-PUW35_10020;Dbxref=NCBI_GP:WJG94756.1;Name=WJG94756.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=PUW35_10020;product=multidrug efflux MFS transporter MdtG;protein_id=WJG94756.1;transl_table=11 CP118132.1 Genbank gene 2030056 2030430 . + . ID=gene-PUW35_10025;Name=PUW35_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10025 CP118132.1 Protein Homology CDS 2030056 2030430 . + 0 ID=cds-WJG94757.1;Parent=gene-PUW35_10025;Dbxref=NCBI_GP:WJG94757.1;Name=WJG94757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=PUW35_10025;product=MysB family protein;protein_id=WJG94757.1;transl_table=11 CP118132.1 Genbank gene 2030431 2030658 . - . ID=gene-PUW35_10030;Name=PUW35_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10030 CP118132.1 Protein Homology CDS 2030431 2030658 . - 0 ID=cds-WJG94758.1;Parent=gene-PUW35_10030;Dbxref=NCBI_GP:WJG94758.1;Name=WJG94758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=PUW35_10030;product=YceK/YidQ family lipoprotein;protein_id=WJG94758.1;transl_table=11 CP118132.1 Genbank gene 2030732 2033275 . - . ID=gene-PUW35_10035;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=PUW35_10035 CP118132.1 Protein Homology CDS 2030732 2033275 . - 0 ID=cds-WJG94759.1;Parent=gene-PUW35_10035;Dbxref=NCBI_GP:WJG94759.1;Name=WJG94759.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=PUW35_10035;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WJG94759.1;transl_table=11 CP118132.1 Genbank gene 2033268 2034803 . - . ID=gene-PUW35_10040;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=PUW35_10040 CP118132.1 Protein Homology CDS 2033268 2034803 . - 0 ID=cds-WJG94760.1;Parent=gene-PUW35_10040;Dbxref=NCBI_GP:WJG94760.1;Name=WJG94760.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=PUW35_10040;product=glucans biosynthesis protein MdoG;protein_id=WJG94760.1;transl_table=11 CP118132.1 Genbank gene 2035075 2036229 . + . ID=gene-PUW35_10045;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=PUW35_10045 CP118132.1 Protein Homology CDS 2035075 2036229 . + 0 ID=cds-WJG94761.1;Parent=gene-PUW35_10045;Dbxref=NCBI_GP:WJG94761.1;Name=WJG94761.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=PUW35_10045;product=glucans biosynthesis protein MdoC;protein_id=WJG94761.1;transl_table=11 CP118132.1 Genbank gene 2036246 2037733 . - . ID=gene-PUW35_10050;Name=PUW35_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10050 CP118132.1 Protein Homology CDS 2036246 2037733 . - 0 ID=cds-WJG94762.1;Parent=gene-PUW35_10050;Dbxref=NCBI_GP:WJG94762.1;Name=WJG94762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=PUW35_10050;product=phospholipase D family protein;protein_id=WJG94762.1;transl_table=11 CP118132.1 Genbank gene 2037669 2038208 . - . ID=gene-PUW35_10055;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=PUW35_10055 CP118132.1 Protein Homology CDS 2037669 2038208 . - 0 ID=cds-WJG94763.1;Parent=gene-PUW35_10055;Dbxref=NCBI_GP:WJG94763.1;Name=WJG94763.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=PUW35_10055;product=O-acetyl-ADP-ribose deacetylase;protein_id=WJG94763.1;transl_table=11 CP118132.1 Genbank gene 2038295 2038615 . - . ID=gene-PUW35_10060;Name=PUW35_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10060 CP118132.1 Protein Homology CDS 2038295 2038615 . - 0 ID=cds-WJG94764.1;Parent=gene-PUW35_10060;Dbxref=NCBI_GP:WJG94764.1;Name=WJG94764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=PUW35_10060;product=type 1 fimbrial protein;protein_id=WJG94764.1;transl_table=11 CP118132.1 Genbank gene 2038746 2039072 . - . ID=gene-PUW35_10065;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=PUW35_10065 CP118132.1 Protein Homology CDS 2038746 2039072 . - 0 ID=cds-WJG94765.1;Parent=gene-PUW35_10065;Dbxref=NCBI_GP:WJG94765.1;Name=WJG94765.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=PUW35_10065;product=curli assembly chaperone CsgC;protein_id=WJG94765.1;transl_table=11 CP118132.1 Genbank gene 2039134 2039589 . - . ID=gene-PUW35_10070;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=PUW35_10070 CP118132.1 Protein Homology CDS 2039134 2039589 . - 0 ID=cds-WJG94766.1;Parent=gene-PUW35_10070;Dbxref=NCBI_GP:WJG94766.1;Name=WJG94766.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=PUW35_10070;product=curli major subunit CsgA;protein_id=WJG94766.1;transl_table=11 CP118132.1 Genbank gene 2039631 2040086 . - . ID=gene-PUW35_10075;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=PUW35_10075 CP118132.1 Protein Homology CDS 2039631 2040086 . - 0 ID=cds-WJG94767.1;Parent=gene-PUW35_10075;Dbxref=NCBI_GP:WJG94767.1;Name=WJG94767.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=PUW35_10075;product=curli minor subunit CsgB;protein_id=WJG94767.1;transl_table=11 CP118132.1 Genbank gene 2040840 2041490 . + . ID=gene-PUW35_10080;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=PUW35_10080 CP118132.1 Protein Homology CDS 2040840 2041490 . + 0 ID=cds-WJG94768.1;Parent=gene-PUW35_10080;Dbxref=NCBI_GP:WJG94768.1;Name=WJG94768.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=PUW35_10080;product=biofilm master transcriptional regulator CsgD;protein_id=WJG94768.1;transl_table=11 CP118132.1 Genbank gene 2041495 2041890 . + . ID=gene-PUW35_10085;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=PUW35_10085 CP118132.1 Protein Homology CDS 2041495 2041890 . + 0 ID=cds-WJG94769.1;Parent=gene-PUW35_10085;Dbxref=NCBI_GP:WJG94769.1;Name=WJG94769.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=PUW35_10085;product=curli production assembly/transport protein CsgE;protein_id=WJG94769.1;transl_table=11 CP118132.1 Genbank gene 2041917 2042333 . + . ID=gene-PUW35_10090;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=PUW35_10090 CP118132.1 Protein Homology CDS 2041917 2042333 . + 0 ID=cds-WJG94770.1;Parent=gene-PUW35_10090;Dbxref=NCBI_GP:WJG94770.1;Name=WJG94770.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=PUW35_10090;product=curli production assembly/transport protein CsgF;protein_id=WJG94770.1;transl_table=11 CP118132.1 Genbank gene 2042360 2043193 . + . ID=gene-PUW35_10095;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=PUW35_10095 CP118132.1 Protein Homology CDS 2042360 2043193 . + 0 ID=cds-WJG94771.1;Parent=gene-PUW35_10095;Dbxref=NCBI_GP:WJG94771.1;Name=WJG94771.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=PUW35_10095;product=curli production assembly/transport protein CsgG;protein_id=WJG94771.1;transl_table=11 CP118132.1 Genbank gene 2043232 2043714 . - . ID=gene-PUW35_10100;Name=PUW35_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10100 CP118132.1 Protein Homology CDS 2043232 2043714 . - 0 ID=cds-WJG94772.1;Parent=gene-PUW35_10100;Dbxref=NCBI_GP:WJG94772.1;Name=WJG94772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=PUW35_10100;product=DUF1097 domain-containing protein;protein_id=WJG94772.1;transl_table=11 CP118132.1 Genbank pseudogene 2043815 2044312 . - . ID=gene-PUW35_10105;Name=PUW35_10105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10105;pseudo=true CP118132.1 Protein Homology CDS 2043815 2044312 . - 0 ID=cds-PUW35_10105;Parent=gene-PUW35_10105;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=PUW35_10105;product=molecular chaperone;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2044309 2044398 . - . ID=gene-PUW35_10110;Name=PUW35_10110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10110;pseudo=true CP118132.1 Protein Homology CDS 2044309 2044398 . - 0 ID=cds-PUW35_10110;Parent=gene-PUW35_10110;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=PUW35_10110;product=phosphatase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2044483 2045421 . - . ID=gene-PUW35_10115;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=PUW35_10115 CP118132.1 Protein Homology CDS 2044483 2045421 . - 0 ID=cds-WJG94773.1;Parent=gene-PUW35_10115;Dbxref=NCBI_GP:WJG94773.1;Name=WJG94773.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=PUW35_10115;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WJG94773.1;transl_table=11 CP118132.1 Genbank gene 2045656 2045742 . + . ID=gene-PUW35_10120;Name=PUW35_10120;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_10120 CP118132.1 tRNAscan-SE tRNA 2045656 2045742 . + . ID=rna-PUW35_10120;Parent=gene-PUW35_10120;anticodon=(pos:2045690..2045692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10120;product=tRNA-Ser CP118132.1 tRNAscan-SE exon 2045656 2045742 . + . ID=exon-PUW35_10120-1;Parent=rna-PUW35_10120;anticodon=(pos:2045690..2045692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10120;product=tRNA-Ser CP118132.1 Genbank gene 2045792 2045999 . + . ID=gene-PUW35_10125;Name=PUW35_10125;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW35_10125 CP118132.1 cmsearch ncRNA 2045792 2045999 . + . ID=rna-PUW35_10125;Parent=gene-PUW35_10125;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_10125;product=RtT sRNA CP118132.1 cmsearch exon 2045792 2045999 . + . ID=exon-PUW35_10125-1;Parent=rna-PUW35_10125;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_10125;product=RtT sRNA CP118132.1 Genbank pseudogene 2046247 2046345 . + . ID=gene-PUW35_10130;Name=PUW35_10130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10130;pseudo=true CP118132.1 Protein Homology CDS 2046247 2046345 . + 0 ID=cds-PUW35_10130;Parent=gene-PUW35_10130;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=PUW35_10130;product=integrase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2046428 2046544 . + . ID=gene-PUW35_10135;Name=PUW35_10135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10135;pseudo=true CP118132.1 Protein Homology CDS 2046428 2046544 . + 0 ID=cds-PUW35_10135;Parent=gene-PUW35_10135;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=PUW35_10135;product=transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2046750 2047772 . - . ID=gene-PUW35_10140;Name=PUW35_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10140 CP118132.1 Protein Homology CDS 2046750 2047772 . - 0 ID=cds-WJG95076.1;Parent=gene-PUW35_10140;Dbxref=NCBI_GP:WJG95076.1;Name=WJG95076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1;locus_tag=PUW35_10140;product=IS110-like element ISSaen1 family transposase;protein_id=WJG95076.1;transl_table=11 CP118132.1 Genbank pseudogene 2047839 2047973 . + . ID=gene-PUW35_10145;Name=PUW35_10145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10145;pseudo=true CP118132.1 Protein Homology CDS 2047839 2047973 . + 0 ID=cds-PUW35_10145;Parent=gene-PUW35_10145;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=PUW35_10145;product=transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2048234 2049052 . - . ID=gene-PUW35_10150;Name=PUW35_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10150 CP118132.1 Protein Homology CDS 2048234 2049052 . - 0 ID=cds-WJG94774.1;Parent=gene-PUW35_10150;Dbxref=NCBI_GP:WJG94774.1;Name=WJG94774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=PUW35_10150;product=hypothetical protein;protein_id=WJG94774.1;transl_table=11 CP118132.1 Genbank gene 2050067 2050156 . - . ID=gene-PUW35_10155;Name=PUW35_10155;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_10155 CP118132.1 tRNAscan-SE tRNA 2050067 2050156 . - . ID=rna-PUW35_10155;Parent=gene-PUW35_10155;anticodon=(pos:complement(2050120..2050122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10155;product=tRNA-Ser CP118132.1 tRNAscan-SE exon 2050067 2050156 . - . ID=exon-PUW35_10155-1;Parent=rna-PUW35_10155;anticodon=(pos:complement(2050120..2050122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10155;product=tRNA-Ser CP118132.1 Genbank gene 2050245 2051042 . + . ID=gene-PUW35_10160;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=PUW35_10160 CP118132.1 Protein Homology CDS 2050245 2051042 . + 0 ID=cds-WJG94775.1;Parent=gene-PUW35_10160;Dbxref=NCBI_GP:WJG94775.1;Name=WJG94775.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=PUW35_10160;product=DgsA anti-repressor MtfA;protein_id=WJG94775.1;transl_table=11 CP118132.1 Genbank gene 2051143 2051218 . + . ID=gene-PUW35_10165;Name=PUW35_10165;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_10165 CP118132.1 tRNAscan-SE tRNA 2051143 2051218 . + . ID=rna-PUW35_10165;Parent=gene-PUW35_10165;anticodon=(pos:2051176..2051178);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10165;product=tRNA-Asn CP118132.1 tRNAscan-SE exon 2051143 2051218 . + . ID=exon-PUW35_10165-1;Parent=rna-PUW35_10165;anticodon=(pos:2051176..2051178);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10165;product=tRNA-Asn CP118132.1 Genbank pseudogene 2051386 2051691 . + . ID=gene-PUW35_10170;Name=PUW35_10170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10170;pseudo=true CP118132.1 Protein Homology CDS 2051386 2051691 . + 0 ID=cds-PUW35_10170;Parent=gene-PUW35_10170;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=PUW35_10170;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2052113 2052188 . + . ID=gene-PUW35_10175;Name=PUW35_10175;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_10175 CP118132.1 tRNAscan-SE tRNA 2052113 2052188 . + . ID=rna-PUW35_10175;Parent=gene-PUW35_10175;anticodon=(pos:2052146..2052148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10175;product=tRNA-Asn CP118132.1 tRNAscan-SE exon 2052113 2052188 . + . ID=exon-PUW35_10175-1;Parent=rna-PUW35_10175;anticodon=(pos:2052146..2052148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10175;product=tRNA-Asn CP118132.1 Genbank gene 2052368 2053642 . + . ID=gene-PUW35_10180;Name=PUW35_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10180 CP118132.1 Protein Homology CDS 2052368 2053642 . + 0 ID=cds-WJG94776.1;Parent=gene-PUW35_10180;Dbxref=NCBI_GP:WJG94776.1;Name=WJG94776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=PUW35_10180;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WJG94776.1;transl_table=11 CP118132.1 Genbank gene 2053732 2053965 . - . ID=gene-PUW35_10185;Name=PUW35_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10185 CP118132.1 Protein Homology CDS 2053732 2053965 . - 0 ID=cds-WJG94777.1;Parent=gene-PUW35_10185;Dbxref=NCBI_GP:WJG94777.1;Name=WJG94777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747333.1;locus_tag=PUW35_10185;product=hypothetical protein;protein_id=WJG94777.1;transl_table=11 CP118132.1 Genbank gene 2054444 2055280 . - . ID=gene-PUW35_10190;Name=PUW35_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10190 CP118132.1 Protein Homology CDS 2054444 2055280 . - 0 ID=cds-WJG94778.1;Parent=gene-PUW35_10190;Dbxref=NCBI_GP:WJG94778.1;Name=WJG94778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064127.1;locus_tag=PUW35_10190;product=hypothetical protein;protein_id=WJG94778.1;transl_table=11 CP118132.1 Genbank gene 2055302 2055865 . - . ID=gene-PUW35_10195;Name=PUW35_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10195 CP118132.1 Protein Homology CDS 2055302 2055865 . - 0 ID=cds-WJG94779.1;Parent=gene-PUW35_10195;Dbxref=NCBI_GP:WJG94779.1;Name=WJG94779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072670.1;locus_tag=PUW35_10195;product=hypothetical protein;protein_id=WJG94779.1;transl_table=11 CP118132.1 Genbank gene 2056276 2057157 . + . ID=gene-PUW35_10200;Name=PUW35_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10200 CP118132.1 Protein Homology CDS 2056276 2057157 . + 0 ID=cds-WJG94780.1;Parent=gene-PUW35_10200;Dbxref=NCBI_GP:WJG94780.1;Name=WJG94780.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028416.1;locus_tag=PUW35_10200;product=TIR domain-containing protein;protein_id=WJG94780.1;transl_table=11 CP118132.1 Genbank pseudogene 2057385 2057717 . - . ID=gene-PUW35_10205;Name=PUW35_10205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10205;pseudo=true CP118132.1 Protein Homology CDS 2057385 2057717 . - 0 ID=cds-PUW35_10205;Parent=gene-PUW35_10205;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592083.1;locus_tag=PUW35_10205;product=pilus assembly protein PilV;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2057731 2059569 . - . ID=gene-PUW35_10210;Name=PUW35_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10210 CP118132.1 Protein Homology CDS 2057731 2059569 . - 0 ID=cds-WJG94781.1;Parent=gene-PUW35_10210;Dbxref=NCBI_GP:WJG94781.1;Name=WJG94781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127942.1;locus_tag=PUW35_10210;product=tail fiber protein;protein_id=WJG94781.1;transl_table=11 CP118132.1 Genbank gene 2059585 2060046 . - . ID=gene-PUW35_10215;Name=PUW35_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10215 CP118132.1 Protein Homology CDS 2059585 2060046 . - 0 ID=cds-WJG94782.1;Parent=gene-PUW35_10215;Dbxref=NCBI_GP:WJG94782.1;Name=WJG94782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243510.1;locus_tag=PUW35_10215;product=type 4 pilus major pilin;protein_id=WJG94782.1;transl_table=11 CP118132.1 Genbank pseudogene 2060454 2060760 . - . ID=gene-PUW35_10220;Name=PUW35_10220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10220;pseudo=true CP118132.1 Protein Homology CDS 2060454 2060760 . - 0 ID=cds-PUW35_10220;Parent=gene-PUW35_10220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=PUW35_10220;product=conjugal transfer protein TraD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2061397 2062917 . + . ID=gene-PUW35_10225;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=PUW35_10225 CP118132.1 Protein Homology CDS 2061397 2062917 . + 0 ID=cds-WJG94783.1;Parent=gene-PUW35_10225;Dbxref=NCBI_GP:WJG94783.1;Name=WJG94783.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964095.1;locus_tag=PUW35_10225;product=MobQ family relaxase;protein_id=WJG94783.1;transl_table=11 CP118132.1 Genbank gene 2063129 2063830 . - . ID=gene-PUW35_10230;Name=PUW35_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10230 CP118132.1 Protein Homology CDS 2063129 2063830 . - 0 ID=cds-WJG94784.1;Parent=gene-PUW35_10230;Dbxref=NCBI_GP:WJG94784.1;Name=WJG94784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001732467.1;locus_tag=PUW35_10230;product=DUF2971 domain-containing protein;protein_id=WJG94784.1;transl_table=11 CP118132.1 Genbank gene 2064016 2064279 . - . ID=gene-PUW35_10235;Name=PUW35_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10235 CP118132.1 Protein Homology CDS 2064016 2064279 . - 0 ID=cds-WJG94785.1;Parent=gene-PUW35_10235;Dbxref=NCBI_GP:WJG94785.1;Name=WJG94785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764615.1;locus_tag=PUW35_10235;product=hypothetical protein;protein_id=WJG94785.1;transl_table=11 CP118132.1 Genbank gene 2064290 2064820 . - . ID=gene-PUW35_10240;Name=PUW35_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10240 CP118132.1 Protein Homology CDS 2064290 2064820 . - 0 ID=cds-WJG94786.1;Parent=gene-PUW35_10240;Dbxref=NCBI_GP:WJG94786.1;Name=WJG94786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=PUW35_10240;product=lipoprotein;protein_id=WJG94786.1;transl_table=11 CP118132.1 Genbank gene 2065255 2065728 . + . ID=gene-PUW35_10245;Name=PUW35_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10245 CP118132.1 Protein Homology CDS 2065255 2065728 . + 0 ID=cds-WJG94787.1;Parent=gene-PUW35_10245;Dbxref=NCBI_GP:WJG94787.1;Name=WJG94787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351134.1;locus_tag=PUW35_10245;product=DUF4755 domain-containing protein;protein_id=WJG94787.1;transl_table=11 CP118132.1 Genbank gene 2065761 2066138 . + . ID=gene-PUW35_10250;Name=PUW35_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10250 CP118132.1 Protein Homology CDS 2065761 2066138 . + 0 ID=cds-WJG94788.1;Parent=gene-PUW35_10250;Dbxref=NCBI_GP:WJG94788.1;Name=WJG94788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734570.1;locus_tag=PUW35_10250;product=hypothetical protein;protein_id=WJG94788.1;transl_table=11 CP118132.1 Genbank gene 2066216 2067826 . - . ID=gene-PUW35_10255;Name=PUW35_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10255 CP118132.1 Protein Homology CDS 2066216 2067826 . - 0 ID=cds-WJG94789.1;Parent=gene-PUW35_10255;Dbxref=NCBI_GP:WJG94789.1;Name=WJG94789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276246.1;locus_tag=PUW35_10255;product=class I SAM-dependent methyltransferase;protein_id=WJG94789.1;transl_table=11 CP118132.1 Genbank gene 2067878 2068840 . - . ID=gene-PUW35_10260;Name=PUW35_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10260 CP118132.1 Protein Homology CDS 2067878 2068840 . - 0 ID=cds-WJG94790.1;Parent=gene-PUW35_10260;Dbxref=NCBI_GP:WJG94790.1;Name=WJG94790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000399004.1;locus_tag=PUW35_10260;product=hypothetical protein;protein_id=WJG94790.1;transl_table=11 CP118132.1 Genbank gene 2068896 2069282 . - . ID=gene-PUW35_10265;Name=PUW35_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10265 CP118132.1 Protein Homology CDS 2068896 2069282 . - 0 ID=cds-WJG94791.1;Parent=gene-PUW35_10265;Dbxref=NCBI_GP:WJG94791.1;Name=WJG94791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226498.1;locus_tag=PUW35_10265;product=hypothetical protein;protein_id=WJG94791.1;transl_table=11 CP118132.1 Genbank gene 2069367 2069636 . - . ID=gene-PUW35_10270;Name=PUW35_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10270 CP118132.1 Protein Homology CDS 2069367 2069636 . - 0 ID=cds-WJG94792.1;Parent=gene-PUW35_10270;Dbxref=NCBI_GP:WJG94792.1;Name=WJG94792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059618.1;locus_tag=PUW35_10270;product=hypothetical protein;protein_id=WJG94792.1;transl_table=11 CP118132.1 Genbank pseudogene 2070995 2071728 . + . ID=gene-PUW35_10275;Name=PUW35_10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10275;pseudo=true CP118132.1 Protein Homology CDS 2070995 2071728 . + 0 ID=cds-PUW35_10275;Parent=gene-PUW35_10275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860215.1;locus_tag=PUW35_10275;product=DNA-binding protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2071759 2072550 . + . ID=gene-PUW35_10280;Name=PUW35_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10280 CP118132.1 Protein Homology CDS 2071759 2072550 . + 0 ID=cds-WJG94793.1;Parent=gene-PUW35_10280;Dbxref=NCBI_GP:WJG94793.1;Name=WJG94793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735917.1;locus_tag=PUW35_10280;product=hypothetical protein;protein_id=WJG94793.1;transl_table=11 CP118132.1 Genbank pseudogene 2072636 2073114 . + . ID=gene-PUW35_10285;Name=PUW35_10285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10285;pseudo=true CP118132.1 Protein Homology CDS 2072636 2073114 . + 0 ID=cds-PUW35_10285;Parent=gene-PUW35_10285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233373.1;locus_tag=PUW35_10285;product=DUF4756 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2073275 2073679 . + . ID=gene-PUW35_10290;Name=PUW35_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10290 CP118132.1 Protein Homology CDS 2073275 2073679 . + 0 ID=cds-WJG94794.1;Parent=gene-PUW35_10290;Dbxref=NCBI_GP:WJG94794.1;Name=WJG94794.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=PUW35_10290;product=H-NS family nucleoid-associated regulatory protein;protein_id=WJG94794.1;transl_table=11 CP118132.1 Genbank pseudogene 2073727 2074003 . + . ID=gene-PUW35_10295;Name=PUW35_10295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10295;pseudo=true CP118132.1 Protein Homology CDS 2073727 2074003 . + 0 ID=cds-PUW35_10295;Parent=gene-PUW35_10295;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=PUW35_10295;product=IS481 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2074095 2074643 . - . ID=gene-PUW35_10300;Name=PUW35_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10300 CP118132.1 Protein Homology CDS 2074095 2074643 . - 0 ID=cds-WJG94795.1;Parent=gene-PUW35_10300;Dbxref=NCBI_GP:WJG94795.1;Name=WJG94795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746429.1;locus_tag=PUW35_10300;product=SLATT domain-containing protein;protein_id=WJG94795.1;transl_table=11 CP118132.1 Genbank gene 2074708 2075979 . - . ID=gene-PUW35_10305;Name=PUW35_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10305 CP118132.1 Protein Homology CDS 2074708 2075979 . - 0 ID=cds-WJG94796.1;Parent=gene-PUW35_10305;Dbxref=NCBI_GP:WJG94796.1;Name=WJG94796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102011.1;locus_tag=PUW35_10305;product=nucleotidyltransferase;protein_id=WJG94796.1;transl_table=11 CP118132.1 Genbank gene 2076225 2076521 . - . ID=gene-PUW35_10310;Name=PUW35_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10310 CP118132.1 Protein Homology CDS 2076225 2076521 . - 0 ID=cds-WJG94797.1;Parent=gene-PUW35_10310;Dbxref=NCBI_GP:WJG94797.1;Name=WJG94797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=PUW35_10310;product=hypothetical protein;protein_id=WJG94797.1;transl_table=11 CP118132.1 Genbank gene 2076566 2076856 . - . ID=gene-PUW35_10315;Name=PUW35_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10315 CP118132.1 Protein Homology CDS 2076566 2076856 . - 0 ID=cds-WJG94798.1;Parent=gene-PUW35_10315;Dbxref=NCBI_GP:WJG94798.1;Name=WJG94798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=PUW35_10315;product=hypothetical protein;protein_id=WJG94798.1;transl_table=11 CP118132.1 Genbank gene 2076938 2077156 . - . ID=gene-PUW35_10320;Name=PUW35_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10320 CP118132.1 Protein Homology CDS 2076938 2077156 . - 0 ID=cds-WJG94799.1;Parent=gene-PUW35_10320;Dbxref=NCBI_GP:WJG94799.1;Name=WJG94799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240778.1;locus_tag=PUW35_10320;product=AlpA family transcriptional regulator;protein_id=WJG94799.1;transl_table=11 CP118132.1 Genbank pseudogene 2077307 2078181 . - . ID=gene-PUW35_10325;Name=PUW35_10325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10325;pseudo=true CP118132.1 Protein Homology CDS 2077307 2078181 . - 0 ID=cds-PUW35_10325;Parent=gene-PUW35_10325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166882.1;locus_tag=PUW35_10325;product=DUF6387 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2078724 2079248 . + . ID=gene-PUW35_10330;Name=PUW35_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10330 CP118132.1 Protein Homology CDS 2078724 2079248 . + 0 ID=cds-WJG94800.1;Parent=gene-PUW35_10330;Dbxref=NCBI_GP:WJG94800.1;Name=WJG94800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=PUW35_10330;product=peptidase;protein_id=WJG94800.1;transl_table=11 CP118132.1 Genbank pseudogene 2079728 2080195 . + . ID=gene-PUW35_10335;Name=PUW35_10335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10335;pseudo=true CP118132.1 Protein Homology CDS 2079728 2080195 . + 0 ID=cds-PUW35_10335;Parent=gene-PUW35_10335;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=PUW35_10335;product=phage integrase N-terminal domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2080281 2080559 . + . ID=gene-PUW35_10340;Name=PUW35_10340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10340;pseudo=true CP118132.1 Protein Homology CDS 2080281 2080559 . + 0 ID=cds-PUW35_10340;Parent=gene-PUW35_10340;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=PUW35_10340;product=transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2081243 2082937 . + . ID=gene-PUW35_10345;Name=PUW35_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10345 CP118132.1 Protein Homology CDS 2081243 2082937 . + 0 ID=cds-WJG95077.1;Parent=gene-PUW35_10345;Dbxref=NCBI_GP:WJG95077.1;Name=WJG95077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=PUW35_10345;product=SEL1-like repeat protein;protein_id=WJG95077.1;transl_table=11 CP118132.1 Genbank gene 2082994 2084724 . + . ID=gene-PUW35_10350;Name=PUW35_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10350 CP118132.1 Protein Homology CDS 2082994 2084724 . + 0 ID=cds-WJG94801.1;Parent=gene-PUW35_10350;Dbxref=NCBI_GP:WJG94801.1;Name=WJG94801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=PUW35_10350;product=hypothetical protein;protein_id=WJG94801.1;transl_table=11 CP118132.1 Genbank pseudogene 2084782 2084886 . - . ID=gene-PUW35_10355;Name=PUW35_10355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10355;pseudo=true CP118132.1 Protein Homology CDS 2084782 2084886 . - 0 ID=cds-PUW35_10355;Parent=gene-PUW35_10355;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=PUW35_10355;product=DUF520 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2084934 2085107 . + . ID=gene-PUW35_10360;Name=PUW35_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10360 CP118132.1 Protein Homology CDS 2084934 2085107 . + 0 ID=cds-WJG94802.1;Parent=gene-PUW35_10360;Dbxref=NCBI_GP:WJG94802.1;Name=WJG94802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=PUW35_10360;product=hypothetical protein;protein_id=WJG94802.1;transl_table=11 CP118132.1 Genbank pseudogene 2085288 2085386 . + . ID=gene-PUW35_10365;Name=PUW35_10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10365;pseudo=true CP118132.1 Protein Homology CDS 2085288 2085386 . + 0 ID=cds-PUW35_10365;Parent=gene-PUW35_10365;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885291.1;locus_tag=PUW35_10365;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2085629 2087083 . - . ID=gene-PUW35_10370;Name=PUW35_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10370 CP118132.1 Protein Homology CDS 2085629 2087083 . - 0 ID=cds-WJG94803.1;Parent=gene-PUW35_10370;Dbxref=NCBI_GP:WJG94803.1;Name=WJG94803.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=PUW35_10370;product=AMP nucleosidase;protein_id=WJG94803.1;transl_table=11 CP118132.1 Genbank gene 2087129 2087290 . + . ID=gene-PUW35_10375;Name=PUW35_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10375 CP118132.1 Protein Homology CDS 2087129 2087290 . + 0 ID=cds-WJG94804.1;Parent=gene-PUW35_10375;Dbxref=NCBI_GP:WJG94804.1;Name=WJG94804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=PUW35_10375;product=cytoplasmic protein;protein_id=WJG94804.1;transl_table=11 CP118132.1 Genbank gene 2087279 2087605 . - . ID=gene-PUW35_10380;Name=PUW35_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10380 CP118132.1 Protein Homology CDS 2087279 2087605 . - 0 ID=cds-WJG94805.1;Parent=gene-PUW35_10380;Dbxref=NCBI_GP:WJG94805.1;Name=WJG94805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=PUW35_10380;product=DUF1493 family protein;protein_id=WJG94805.1;transl_table=11 CP118132.1 Genbank pseudogene 2087599 2088062 . - . ID=gene-PUW35_10385;Name=PUW35_10385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10385;pseudo=true CP118132.1 Protein Homology CDS 2087599 2088062 . - 0 ID=cds-PUW35_10385;Parent=gene-PUW35_10385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=PUW35_10385;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2088482 2088557 . - . ID=gene-PUW35_10390;Name=PUW35_10390;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_10390 CP118132.1 tRNAscan-SE tRNA 2088482 2088557 . - . ID=rna-PUW35_10390;Parent=gene-PUW35_10390;anticodon=(pos:complement(2088522..2088524));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10390;product=tRNA-Asn CP118132.1 tRNAscan-SE exon 2088482 2088557 . - . ID=exon-PUW35_10390-1;Parent=rna-PUW35_10390;anticodon=(pos:complement(2088522..2088524));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10390;product=tRNA-Asn CP118132.1 Genbank gene 2088698 2090155 . - . ID=gene-PUW35_10395;Name=PUW35_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10395 CP118132.1 Protein Homology CDS 2088698 2090155 . - 0 ID=cds-WJG95078.1;Parent=gene-PUW35_10395;Dbxref=NCBI_GP:WJG95078.1;Name=WJG95078.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=PUW35_10395;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WJG95078.1;transl_table=11 CP118132.1 Genbank gene 2090315 2090390 . + . ID=gene-PUW35_10400;Name=PUW35_10400;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_10400 CP118132.1 tRNAscan-SE tRNA 2090315 2090390 . + . ID=rna-PUW35_10400;Parent=gene-PUW35_10400;anticodon=(pos:2090348..2090350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10400;product=tRNA-Asn CP118132.1 tRNAscan-SE exon 2090315 2090390 . + . ID=exon-PUW35_10400-1;Parent=rna-PUW35_10400;anticodon=(pos:2090348..2090350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_10400;product=tRNA-Asn CP118132.1 Genbank gene 2090615 2091544 . - . ID=gene-PUW35_10405;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=PUW35_10405 CP118132.1 Protein Homology CDS 2090615 2091544 . - 0 ID=cds-WJG94806.1;Parent=gene-PUW35_10405;Dbxref=NCBI_GP:WJG94806.1;Name=WJG94806.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=PUW35_10405;product=L%2CD-transpeptidase;protein_id=WJG94806.1;transl_table=11 CP118132.1 Genbank gene 2091622 2092692 . - . ID=gene-PUW35_10410;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=PUW35_10410 CP118132.1 Protein Homology CDS 2091622 2092692 . - 0 ID=cds-WJG94807.1;Parent=gene-PUW35_10410;Dbxref=NCBI_GP:WJG94807.1;Name=WJG94807.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=PUW35_10410;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WJG94807.1;transl_table=11 CP118132.1 Genbank gene 2092719 2093462 . - . ID=gene-PUW35_10415;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=PUW35_10415 CP118132.1 Protein Homology CDS 2092719 2093462 . - 0 ID=cds-WJG94808.1;Parent=gene-PUW35_10415;Dbxref=NCBI_GP:WJG94808.1;Name=WJG94808.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=PUW35_10415;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WJG94808.1;transl_table=11 CP118132.1 Genbank gene 2093459 2094004 . - . ID=gene-PUW35_10420;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=PUW35_10420 CP118132.1 Protein Homology CDS 2093459 2094004 . - 0 ID=cds-WJG94809.1;Parent=gene-PUW35_10420;Dbxref=NCBI_GP:WJG94809.1;Name=WJG94809.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=PUW35_10420;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WJG94809.1;transl_table=11 CP118132.1 Genbank gene 2094001 2095515 . - . ID=gene-PUW35_10425;Name=PUW35_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10425 CP118132.1 Protein Homology CDS 2094001 2095515 . - 0 ID=cds-WJG94810.1;Parent=gene-PUW35_10425;Dbxref=NCBI_GP:WJG94810.1;Name=WJG94810.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=PUW35_10425;product=cobyric acid synthase;protein_id=WJG94810.1;transl_table=11 CP118132.1 Genbank pseudogene 2095512 2096325 . - . ID=gene-PUW35_10430;Name=PUW35_10430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10430;pseudo=true CP118132.1 Protein Homology CDS 2095512 2096325 . - 0 ID=cds-PUW35_10430;Parent=gene-PUW35_10430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=PUW35_10430;product=energy-coupling factor ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2096334 2097011 . - . ID=gene-PUW35_10435;Name=PUW35_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10435 CP118132.1 Protein Homology CDS 2096334 2097011 . - 0 ID=cds-WJG95079.1;Parent=gene-PUW35_10435;Dbxref=NCBI_GP:WJG95079.1;Name=WJG95079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=PUW35_10435;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WJG95079.1;transl_table=11 CP118132.1 Genbank gene 2096998 2097279 . - . ID=gene-PUW35_10440;Name=PUW35_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10440 CP118132.1 Protein Homology CDS 2096998 2097279 . - 0 ID=cds-WJG94811.1;Parent=gene-PUW35_10440;Dbxref=NCBI_GP:WJG94811.1;Name=WJG94811.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=PUW35_10440;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WJG94811.1;transl_table=11 CP118132.1 Genbank gene 2097281 2098018 . - . ID=gene-PUW35_10445;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=PUW35_10445 CP118132.1 Protein Homology CDS 2097281 2098018 . - 0 ID=cds-WJG94812.1;Parent=gene-PUW35_10445;Dbxref=NCBI_GP:WJG94812.1;Name=WJG94812.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cbiM;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=PUW35_10445;product=cobalt ECF transporter S component CbiM;protein_id=WJG94812.1;transl_table=11 CP118132.1 Genbank gene 2098015 2098728 . - . ID=gene-PUW35_10450;Name=PUW35_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10450 CP118132.1 Protein Homology CDS 2098015 2098728 . - 0 ID=cds-WJG94813.1;Parent=gene-PUW35_10450;Dbxref=NCBI_GP:WJG94813.1;Name=WJG94813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=PUW35_10450;product=cobalt-factor II C(20)-methyltransferase;protein_id=WJG94813.1;transl_table=11 CP118132.1 Genbank gene 2098725 2099519 . - . ID=gene-PUW35_10455;Name=PUW35_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10455 CP118132.1 Protein Homology CDS 2098725 2099519 . - 0 ID=cds-WJG94814.1;Parent=gene-PUW35_10455;Dbxref=NCBI_GP:WJG94814.1;Name=WJG94814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=PUW35_10455;product=sirohydrochlorin cobaltochelatase;protein_id=WJG94814.1;transl_table=11 CP118132.1 Genbank gene 2099522 2100313 . - . ID=gene-PUW35_10460;Name=PUW35_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10460 CP118132.1 Protein Homology CDS 2099522 2100313 . - 0 ID=cds-WJG94815.1;Parent=gene-PUW35_10460;Dbxref=NCBI_GP:WJG94815.1;Name=WJG94815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=PUW35_10460;product=cobalt-precorrin-6A reductase;protein_id=WJG94815.1;transl_table=11 CP118132.1 Genbank gene 2100310 2101035 . - . ID=gene-PUW35_10465;Name=PUW35_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10465 CP118132.1 Protein Homology CDS 2100310 2101035 . - 0 ID=cds-WJG94816.1;Parent=gene-PUW35_10465;Dbxref=NCBI_GP:WJG94816.1;Name=WJG94816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=PUW35_10465;product=precorrin-3B C(17)-methyltransferase;protein_id=WJG94816.1;transl_table=11 CP118132.1 Genbank gene 2101035 2102090 . - . ID=gene-PUW35_10470;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=PUW35_10470 CP118132.1 Protein Homology CDS 2101035 2102090 . - 0 ID=cds-WJG94817.1;Parent=gene-PUW35_10470;Dbxref=NCBI_GP:WJG94817.1;Name=WJG94817.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=PUW35_10470;product=cobalt-precorrin 5A hydrolase;protein_id=WJG94817.1;transl_table=11 CP118132.1 Genbank gene 2102071 2102844 . - . ID=gene-PUW35_10475;Name=PUW35_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10475 CP118132.1 Protein Homology CDS 2102071 2102844 . - 0 ID=cds-WJG94818.1;Parent=gene-PUW35_10475;Dbxref=NCBI_GP:WJG94818.1;Name=WJG94818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=PUW35_10475;product=cobalt-precorrin-4 methyltransferase;protein_id=WJG94818.1;transl_table=11 CP118132.1 Genbank gene 2102828 2103406 . - . ID=gene-PUW35_10480;Name=PUW35_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10480 CP118132.1 Protein Homology CDS 2102828 2103406 . - 0 ID=cds-WJG94819.1;Parent=gene-PUW35_10480;Dbxref=NCBI_GP:WJG94819.1;Name=WJG94819.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=PUW35_10480;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WJG94819.1;transl_table=11 CP118132.1 Genbank pseudogene 2103396 2104000 . - . ID=gene-PUW35_10485;Name=PUW35_10485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10485;pseudo=true CP118132.1 Protein Homology CDS 2103396 2104000 . - 0 ID=cds-PUW35_10485;Parent=gene-PUW35_10485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=PUW35_10485;product=cobalt-precorrin-7 (C(5))-methyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2103994 2105131 . - . ID=gene-PUW35_10490;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=pseudogene;locus_tag=PUW35_10490;pseudo=true CP118132.1 Protein Homology CDS 2103994 2105131 . - 0 ID=cds-PUW35_10490;Parent=gene-PUW35_10490;Note=frameshifted%3B internal stop;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=PUW35_10490;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2105131 2105762 . - . ID=gene-PUW35_10495;Name=PUW35_10495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10495;pseudo=true CP118132.1 Protein Homology CDS 2105131 2105762 . - 0 ID=cds-PUW35_10495;Parent=gene-PUW35_10495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=PUW35_10495;product=cobalt-precorrin-8 methylmutase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2105773 2106726 . - . ID=gene-PUW35_10500;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=PUW35_10500 CP118132.1 Protein Homology CDS 2105773 2106726 . - 0 ID=cds-WJG94820.1;Parent=gene-PUW35_10500;Dbxref=NCBI_GP:WJG94820.1;Name=WJG94820.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=PUW35_10500;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WJG94820.1;transl_table=11 CP118132.1 Genbank gene 2106723 2108102 . - . ID=gene-PUW35_10505;Name=PUW35_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10505 CP118132.1 Protein Homology CDS 2106723 2108102 . - 0 ID=cds-WJG94821.1;Parent=gene-PUW35_10505;Dbxref=NCBI_GP:WJG94821.1;Name=WJG94821.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=PUW35_10505;product=cobyrinate a%2Cc-diamide synthase;protein_id=WJG94821.1;transl_table=11 CP118132.1 cmsearch riboswitch 2108199 2108374 . - . ID=id-CP118132.1:2108199..2108374;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118132.1 Genbank pseudogene 2108699 2109593 . - . ID=gene-PUW35_10510;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=pseudogene;locus_tag=PUW35_10510;pseudo=true CP118132.1 Protein Homology CDS 2108699 2109593 . - 0 ID=cds-PUW35_10510;Parent=gene-PUW35_10510;Note=frameshifted;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=PUW35_10510;product=regulatory protein PocR;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2109810 2110604 . - . ID=gene-PUW35_10515;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=PUW35_10515 CP118132.1 Protein Homology CDS 2109810 2110604 . - 0 ID=cds-WJG95080.1;Parent=gene-PUW35_10515;Dbxref=NCBI_GP:WJG95080.1;Name=WJG95080.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=PUW35_10515;product=propanediol diffusion facilitator PduF;protein_id=WJG95080.1;transl_table=11 CP118132.1 Genbank gene 2111129 2111413 . + . ID=gene-PUW35_10520;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=PUW35_10520 CP118132.1 Protein Homology CDS 2111129 2111413 . + 0 ID=cds-WJG94822.1;Parent=gene-PUW35_10520;Dbxref=NCBI_GP:WJG94822.1;Name=WJG94822.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=PUW35_10520;product=propanediol utilization microcompartment protein PduA;protein_id=WJG94822.1;transl_table=11 CP118132.1 Genbank gene 2111410 2112222 . + . ID=gene-PUW35_10525;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=PUW35_10525 CP118132.1 Protein Homology CDS 2111410 2112222 . + 0 ID=cds-WJG94823.1;Parent=gene-PUW35_10525;Dbxref=NCBI_GP:WJG94823.1;Name=WJG94823.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=PUW35_10525;product=propanediol utilization microcompartment protein PduB;protein_id=WJG94823.1;transl_table=11 CP118132.1 Genbank gene 2112241 2113899 . + . ID=gene-PUW35_10530;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=PUW35_10530 CP118132.1 Protein Homology CDS 2112241 2113899 . + 0 ID=cds-WJG94824.1;Parent=gene-PUW35_10530;Dbxref=NCBI_GP:WJG94824.1;Name=WJG94824.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=PUW35_10530;product=propanediol dehydratase large subunit PduC;protein_id=WJG94824.1;transl_table=11 CP118132.1 Genbank gene 2113910 2114584 . + . ID=gene-PUW35_10535;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=PUW35_10535 CP118132.1 Protein Homology CDS 2113910 2114584 . + 0 ID=cds-WJG94825.1;Parent=gene-PUW35_10535;Dbxref=NCBI_GP:WJG94825.1;Name=WJG94825.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=PUW35_10535;product=propanediol dehydratase medium subunit PduD;protein_id=WJG94825.1;transl_table=11 CP118132.1 Genbank gene 2114599 2115120 . + . ID=gene-PUW35_10540;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=PUW35_10540 CP118132.1 Protein Homology CDS 2114599 2115120 . + 0 ID=cds-WJG94826.1;Parent=gene-PUW35_10540;Dbxref=NCBI_GP:WJG94826.1;Name=WJG94826.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=PUW35_10540;product=propanediol dehydratase small subunit PduE;protein_id=WJG94826.1;transl_table=11 CP118132.1 Genbank pseudogene 2115130 2116970 . + . ID=gene-PUW35_10545;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=pseudogene;locus_tag=PUW35_10545;pseudo=true CP118132.1 Protein Homology CDS 2115130 2116970 . + 0 ID=cds-PUW35_10545;Parent=gene-PUW35_10545;Note=frameshifted;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=PUW35_10545;product=propanediol dehydratase reactivase alpha subunit PduG;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2116960 2117310 . + . ID=gene-PUW35_10550;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=PUW35_10550 CP118132.1 Protein Homology CDS 2116960 2117310 . + 0 ID=cds-WJG94827.1;Parent=gene-PUW35_10550;Dbxref=NCBI_GP:WJG94827.1;Name=WJG94827.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=PUW35_10550;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WJG94827.1;transl_table=11 CP118132.1 Genbank gene 2117329 2117604 . + . ID=gene-PUW35_10555;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=PUW35_10555 CP118132.1 Protein Homology CDS 2117329 2117604 . + 0 ID=cds-WJG94828.1;Parent=gene-PUW35_10555;Dbxref=NCBI_GP:WJG94828.1;Name=WJG94828.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=PUW35_10555;product=propanediol utilization microcompartment protein PduJ;protein_id=WJG94828.1;transl_table=11 CP118132.1 Genbank gene 2117608 2118090 . + . ID=gene-PUW35_10560;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=PUW35_10560 CP118132.1 Protein Homology CDS 2117608 2118090 . + 0 ID=cds-WJG94829.1;Parent=gene-PUW35_10560;Dbxref=NCBI_GP:WJG94829.1;Name=WJG94829.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=PUW35_10560;product=propanediol utilization microcompartment protein PduK;protein_id=WJG94829.1;transl_table=11 CP118132.1 Genbank gene 2118090 2118722 . + . ID=gene-PUW35_10565;Name=PUW35_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10565 CP118132.1 Protein Homology CDS 2118090 2118722 . + 0 ID=cds-WJG94830.1;Parent=gene-PUW35_10565;Dbxref=NCBI_GP:WJG94830.1;Name=WJG94830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=PUW35_10565;product=phosphate propanoyltransferase;protein_id=WJG94830.1;transl_table=11 CP118132.1 Genbank gene 2118719 2119210 . + . ID=gene-PUW35_10570;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=PUW35_10570 CP118132.1 Protein Homology CDS 2118719 2119210 . + 0 ID=cds-WJG94831.1;Parent=gene-PUW35_10570;Dbxref=NCBI_GP:WJG94831.1;Name=WJG94831.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=PUW35_10570;product=propanediol utilization microcompartment protein PduM;protein_id=WJG94831.1;transl_table=11 CP118132.1 Genbank gene 2119214 2119489 . + . ID=gene-PUW35_10575;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=PUW35_10575 CP118132.1 Protein Homology CDS 2119214 2119489 . + 0 ID=cds-WJG94832.1;Parent=gene-PUW35_10575;Dbxref=NCBI_GP:WJG94832.1;Name=WJG94832.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=PUW35_10575;product=propanediol utilization microcompartment protein PduN;protein_id=WJG94832.1;transl_table=11 CP118132.1 Genbank pseudogene 2119499 2120472 . + . ID=gene-PUW35_10580;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=pseudogene;locus_tag=PUW35_10580;pseudo=true CP118132.1 Protein Homology CDS 2119499 2120472 . + 0 ID=cds-PUW35_10580;Parent=gene-PUW35_10580;Note=frameshifted;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=PUW35_10580;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2120469 2121863 . + . ID=gene-PUW35_10585;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=PUW35_10585 CP118132.1 Protein Homology CDS 2120469 2121863 . + 0 ID=cds-WJG94833.1;Parent=gene-PUW35_10585;Dbxref=NCBI_GP:WJG94833.1;Name=WJG94833.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=PUW35_10585;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WJG94833.1;transl_table=11 CP118132.1 Genbank gene 2121875 2122987 . + . ID=gene-PUW35_10590;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=PUW35_10590 CP118132.1 Protein Homology CDS 2121875 2122987 . + 0 ID=cds-WJG94834.1;Parent=gene-PUW35_10590;Dbxref=NCBI_GP:WJG94834.1;Name=WJG94834.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=PUW35_10590;product=1-propanol dehydrogenase PduQ;protein_id=WJG94834.1;transl_table=11 CP118132.1 Genbank gene 2122984 2124339 . + . ID=gene-PUW35_10595;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=PUW35_10595 CP118132.1 Protein Homology CDS 2122984 2124339 . + 0 ID=cds-WJG94835.1;Parent=gene-PUW35_10595;Dbxref=NCBI_GP:WJG94835.1;Name=WJG94835.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=PUW35_10595;product=cobalamin reductase PduS;protein_id=WJG94835.1;transl_table=11 CP118132.1 Genbank gene 2124342 2124896 . + . ID=gene-PUW35_10600;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=PUW35_10600 CP118132.1 Protein Homology CDS 2124342 2124896 . + 0 ID=cds-WJG94836.1;Parent=gene-PUW35_10600;Dbxref=NCBI_GP:WJG94836.1;Name=WJG94836.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=PUW35_10600;product=propanediol utilization microcompartment protein PduT;protein_id=WJG94836.1;transl_table=11 CP118132.1 Genbank gene 2124896 2125246 . + . ID=gene-PUW35_10605;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=PUW35_10605 CP118132.1 Protein Homology CDS 2124896 2125246 . + 0 ID=cds-WJG94837.1;Parent=gene-PUW35_10605;Dbxref=NCBI_GP:WJG94837.1;Name=WJG94837.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=PUW35_10605;product=propanediol utilization microcompartment protein PduU;protein_id=WJG94837.1;transl_table=11 CP118132.1 Genbank gene 2125251 2125703 . + . ID=gene-PUW35_10610;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=PUW35_10610 CP118132.1 Protein Homology CDS 2125251 2125703 . + 0 ID=cds-WJG94838.1;Parent=gene-PUW35_10610;Dbxref=NCBI_GP:WJG94838.1;Name=WJG94838.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=PUW35_10610;product=propanediol utilization protein PduV;protein_id=WJG94838.1;transl_table=11 CP118132.1 Genbank gene 2125688 2126902 . + . ID=gene-PUW35_10615;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=PUW35_10615 CP118132.1 Protein Homology CDS 2125688 2126902 . + 0 ID=cds-WJG94839.1;Parent=gene-PUW35_10615;Dbxref=NCBI_GP:WJG94839.1;Name=WJG94839.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=PUW35_10615;product=propanediol utilization propionate kinase PduW;protein_id=WJG94839.1;transl_table=11 CP118132.1 Genbank gene 2126996 2127862 . + . ID=gene-PUW35_10620;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=PUW35_10620 CP118132.1 Protein Homology CDS 2126996 2127862 . + 0 ID=cds-WJG94840.1;Parent=gene-PUW35_10620;Dbxref=NCBI_GP:WJG94840.1;Name=WJG94840.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=PUW35_10620;product=L-threonine kinase PduX;protein_id=WJG94840.1;transl_table=11 CP118132.1 Genbank gene 2127896 2128231 . - . ID=gene-PUW35_10625;Name=PUW35_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10625 CP118132.1 Protein Homology CDS 2127896 2128231 . - 0 ID=cds-WJG94841.1;Parent=gene-PUW35_10625;Dbxref=NCBI_GP:WJG94841.1;Name=WJG94841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=PUW35_10625;product=DUF496 family protein;protein_id=WJG94841.1;transl_table=11 CP118132.1 Genbank gene 2128475 2129533 . - . ID=gene-PUW35_10630;Name=PUW35_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10630 CP118132.1 Protein Homology CDS 2128475 2129533 . - 0 ID=cds-WJG94842.1;Parent=gene-PUW35_10630;Dbxref=NCBI_GP:WJG94842.1;Name=WJG94842.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=PUW35_10630;product=FUSC family protein;protein_id=WJG94842.1;transl_table=11 CP118132.1 Genbank gene 2129652 2130119 . - . ID=gene-PUW35_10635;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=PUW35_10635 CP118132.1 Protein Homology CDS 2129652 2130119 . - 0 ID=cds-WJG94843.1;Parent=gene-PUW35_10635;Dbxref=NCBI_GP:WJG94843.1;Name=WJG94843.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=PUW35_10635;product=DNA gyrase inhibitor SbmC;protein_id=WJG94843.1;transl_table=11 CP118132.1 Genbank gene 2130270 2131442 . - . ID=gene-PUW35_10640;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=PUW35_10640 CP118132.1 Protein Homology CDS 2130270 2131442 . - 0 ID=cds-WJG94844.1;Parent=gene-PUW35_10640;Dbxref=NCBI_GP:WJG94844.1;Name=WJG94844.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=PUW35_10640;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WJG94844.1;transl_table=11 CP118132.1 Genbank gene 2131566 2132330 . - . ID=gene-PUW35_10645;Name=PUW35_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10645 CP118132.1 Protein Homology CDS 2131566 2132330 . - 0 ID=cds-WJG94845.1;Parent=gene-PUW35_10645;Dbxref=NCBI_GP:WJG94845.1;Name=WJG94845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=PUW35_10645;product=thiosulfate reductase cytochrome B subunit;protein_id=WJG94845.1;transl_table=11 CP118132.1 Genbank gene 2132327 2132905 . - . ID=gene-PUW35_10650;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=PUW35_10650 CP118132.1 Protein Homology CDS 2132327 2132905 . - 0 ID=cds-WJG94846.1;Parent=gene-PUW35_10650;Dbxref=NCBI_GP:WJG94846.1;Name=WJG94846.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=PUW35_10650;product=thiosulfate reductase electron transport protein PhsB;protein_id=WJG94846.1;transl_table=11 CP118132.1 Genbank pseudogene 2132920 2135195 . - . ID=gene-PUW35_10655;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=pseudogene;locus_tag=PUW35_10655;pseudo=true CP118132.1 Protein Homology CDS 2132920 2135195 . - 0 ID=cds-PUW35_10655;Parent=gene-PUW35_10655;Note=frameshifted;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=PUW35_10655;product=thiosulfate reductase PhsA;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2135455 2135565 . - . ID=gene-PUW35_10660;Name=PUW35_10660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10660;pseudo=true CP118132.1 Protein Homology CDS 2135455 2135565 . - 0 ID=cds-PUW35_10660;Parent=gene-PUW35_10660;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=PUW35_10660;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2135815 2138094 . + . ID=gene-PUW35_10665;Name=PUW35_10665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10665;pseudo=true CP118132.1 Protein Homology CDS 2135815 2138094 . + 0 ID=cds-PUW35_10665;Parent=gene-PUW35_10665;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=PUW35_10665;product=type III secretion system effector HECT-type E3 ubiquitin transferase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2138227 2138304 . - . ID=gene-PUW35_10670;Name=PUW35_10670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10670;pseudo=true CP118132.1 Protein Homology CDS 2138227 2138304 . - 0 ID=cds-PUW35_10670;Parent=gene-PUW35_10670;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=PUW35_10670;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2138464 2139894 . + . ID=gene-PUW35_10675;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=PUW35_10675 CP118132.1 Protein Homology CDS 2138464 2139894 . + 0 ID=cds-WJG94847.1;Parent=gene-PUW35_10675;Dbxref=NCBI_GP:WJG94847.1;Name=WJG94847.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=PUW35_10675;product=exodeoxyribonuclease I;protein_id=WJG94847.1;transl_table=11 CP118132.1 Genbank gene 2140030 2141388 . - . ID=gene-PUW35_10680;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=PUW35_10680 CP118132.1 Protein Homology CDS 2140030 2141388 . - 0 ID=cds-WJG94848.1;Parent=gene-PUW35_10680;Dbxref=NCBI_GP:WJG94848.1;Name=WJG94848.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=PUW35_10680;product=putrescine/proton symporter PlaP;protein_id=WJG94848.1;transl_table=11 CP118132.1 Genbank gene 2141378 2141440 . - . ID=gene-PUW35_10685;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=PUW35_10685 CP118132.1 Protein Homology CDS 2141378 2141440 . - 0 ID=cds-WJG95081.1;Parent=gene-PUW35_10685;Dbxref=NCBI_GP:WJG95081.1;Name=WJG95081.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=PUW35_10685;product=membrane protein YoeI;protein_id=WJG95081.1;transl_table=11 CP118132.1 Genbank gene 2141673 2142587 . - . ID=gene-PUW35_10690;Name=PUW35_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10690 CP118132.1 Protein Homology CDS 2141673 2142587 . - 0 ID=cds-WJG94849.1;Parent=gene-PUW35_10690;Dbxref=NCBI_GP:WJG94849.1;Name=WJG94849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=PUW35_10690;product=LysR family transcriptional regulator;protein_id=WJG94849.1;transl_table=11 CP118132.1 Genbank gene 2142633 2143457 . - . ID=gene-PUW35_10695;Name=PUW35_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10695 CP118132.1 Protein Homology CDS 2142633 2143457 . - 0 ID=cds-WJG94850.1;Parent=gene-PUW35_10695;Dbxref=NCBI_GP:WJG94850.1;Name=WJG94850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=PUW35_10695;product=SDR family oxidoreductase;protein_id=WJG94850.1;transl_table=11 CP118132.1 Genbank gene 2143620 2143670 . + . ID=gene-PUW35_10700;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=PUW35_10700 CP118132.1 Protein Homology CDS 2143620 2143670 . + 0 ID=cds-WJG95082.1;Parent=gene-PUW35_10700;Dbxref=NCBI_GP:WJG95082.1;Name=WJG95082.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=PUW35_10700;product=his operon leader peptide;protein_id=WJG95082.1;transl_table=11 CP118132.1 cmsearch sequence_feature 2143646 2143769 . + . ID=id-CP118132.1:2143646..2143769;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118132.1 Genbank gene 2143816 2144715 . + . ID=gene-PUW35_10705;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=PUW35_10705 CP118132.1 Protein Homology CDS 2143816 2144715 . + 0 ID=cds-WJG94851.1;Parent=gene-PUW35_10705;Dbxref=NCBI_GP:WJG94851.1;Name=WJG94851.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=PUW35_10705;product=ATP phosphoribosyltransferase;protein_id=WJG94851.1;transl_table=11 CP118132.1 Genbank gene 2144818 2146122 . + . ID=gene-PUW35_10710;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=PUW35_10710 CP118132.1 Protein Homology CDS 2144818 2146122 . + 0 ID=cds-WJG94852.1;Parent=gene-PUW35_10710;Dbxref=NCBI_GP:WJG94852.1;Name=WJG94852.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=PUW35_10710;product=histidinol dehydrogenase;protein_id=WJG94852.1;transl_table=11 CP118132.1 Genbank gene 2146119 2147198 . + . ID=gene-PUW35_10715;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=PUW35_10715 CP118132.1 Protein Homology CDS 2146119 2147198 . + 0 ID=cds-WJG94853.1;Parent=gene-PUW35_10715;Dbxref=NCBI_GP:WJG94853.1;Name=WJG94853.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=PUW35_10715;product=histidinol-phosphate transaminase;protein_id=WJG94853.1;transl_table=11 CP118132.1 Genbank gene 2147195 2148262 . + . ID=gene-PUW35_10720;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=PUW35_10720 CP118132.1 Protein Homology CDS 2147195 2148262 . + 0 ID=cds-WJG94854.1;Parent=gene-PUW35_10720;Dbxref=NCBI_GP:WJG94854.1;Name=WJG94854.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=PUW35_10720;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WJG94854.1;transl_table=11 CP118132.1 Genbank gene 2148262 2148852 . + . ID=gene-PUW35_10725;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=PUW35_10725 CP118132.1 Protein Homology CDS 2148262 2148852 . + 0 ID=cds-WJG94855.1;Parent=gene-PUW35_10725;Dbxref=NCBI_GP:WJG94855.1;Name=WJG94855.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=PUW35_10725;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WJG94855.1;transl_table=11 CP118132.1 Genbank gene 2148852 2149589 . + . ID=gene-PUW35_10730;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=PUW35_10730 CP118132.1 Protein Homology CDS 2148852 2149589 . + 0 ID=cds-WJG94856.1;Parent=gene-PUW35_10730;Dbxref=NCBI_GP:WJG94856.1;Name=WJG94856.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=PUW35_10730;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WJG94856.1;transl_table=11 CP118132.1 Genbank gene 2149571 2150347 . + . ID=gene-PUW35_10735;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=PUW35_10735 CP118132.1 Protein Homology CDS 2149571 2150347 . + 0 ID=cds-WJG94857.1;Parent=gene-PUW35_10735;Dbxref=NCBI_GP:WJG94857.1;Name=WJG94857.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=PUW35_10735;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WJG94857.1;transl_table=11 CP118132.1 Genbank pseudogene 2150341 2150951 . + . ID=gene-PUW35_10740;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=pseudogene;locus_tag=PUW35_10740;pseudo=true CP118132.1 Protein Homology CDS 2150341 2150951 . + 0 ID=cds-PUW35_10740;Parent=gene-PUW35_10740;Note=frameshifted;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=PUW35_10740;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2151030 2152013 . - . ID=gene-PUW35_10745;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=PUW35_10745 CP118132.1 Protein Homology CDS 2151030 2152013 . - 0 ID=cds-WJG94858.1;Parent=gene-PUW35_10745;Dbxref=NCBI_GP:WJG94858.1;Name=WJG94858.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=PUW35_10745;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WJG94858.1;transl_table=11 CP118132.1 Genbank gene 2152156 2153322 . - . ID=gene-PUW35_10750;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=PUW35_10750 CP118132.1 Protein Homology CDS 2152156 2153322 . - 0 ID=cds-WJG94859.1;Parent=gene-PUW35_10750;Dbxref=NCBI_GP:WJG94859.1;Name=WJG94859.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=PUW35_10750;product=UDP-glucose 6-dehydrogenase;protein_id=WJG94859.1;transl_table=11 CP118132.1 Genbank gene 2153559 2154965 . - . ID=gene-PUW35_10755;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=PUW35_10755 CP118132.1 Protein Homology CDS 2153559 2154965 . - 0 ID=cds-WJG94860.1;Parent=gene-PUW35_10755;Dbxref=NCBI_GP:WJG94860.1;Name=WJG94860.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=PUW35_10755;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WJG94860.1;transl_table=11 CP118132.1 Genbank gene 2155129 2156559 . - . ID=gene-PUW35_10760;Name=PUW35_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10760 CP118132.1 Protein Homology CDS 2155129 2156559 . - 0 ID=cds-WJG94861.1;Parent=gene-PUW35_10760;Dbxref=NCBI_GP:WJG94861.1;Name=WJG94861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=PUW35_10760;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WJG94861.1;transl_table=11 CP118132.1 Genbank gene 2156630 2158063 . - . ID=gene-PUW35_10765;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=PUW35_10765 CP118132.1 Protein Homology CDS 2156630 2158063 . - 0 ID=cds-WJG94862.1;Parent=gene-PUW35_10765;Dbxref=NCBI_GP:WJG94862.1;Name=WJG94862.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=PUW35_10765;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WJG94862.1;transl_table=11 CP118132.1 Genbank gene 2158050 2159489 . - . ID=gene-PUW35_10770;Name=PUW35_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10770 CP118132.1 Protein Homology CDS 2158050 2159489 . - 0 ID=cds-WJG94863.1;Parent=gene-PUW35_10770;Dbxref=NCBI_GP:WJG94863.1;Name=WJG94863.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=PUW35_10770;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WJG94863.1;transl_table=11 CP118132.1 Genbank gene 2159490 2160434 . - . ID=gene-PUW35_10775;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=PUW35_10775 CP118132.1 Protein Homology CDS 2159490 2160434 . - 0 ID=cds-WJG94864.1;Parent=gene-PUW35_10775;Dbxref=NCBI_GP:WJG94864.1;Name=WJG94864.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=PUW35_10775;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WJG94864.1;transl_table=11 CP118132.1 Genbank pseudogene 2160435 2161495 . - . ID=gene-PUW35_10780;Name=PUW35_10780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10780;pseudo=true CP118132.1 Protein Homology CDS 2160435 2161495 . - 0 ID=cds-PUW35_10780;Parent=gene-PUW35_10780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=PUW35_10780;product=glycosyltransferase family 1 protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2162090 2163070 . - . ID=gene-PUW35_10785;Name=PUW35_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10785 CP118132.1 Protein Homology CDS 2162090 2163070 . - 0 ID=cds-WJG94865.1;Parent=gene-PUW35_10785;Dbxref=NCBI_GP:WJG94865.1;Name=WJG94865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233008.1;locus_tag=PUW35_10785;product=glycosyltransferase family 2 protein;protein_id=WJG94865.1;transl_table=11 CP118132.1 Genbank gene 2163072 2164370 . - . ID=gene-PUW35_10790;Name=PUW35_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10790 CP118132.1 Protein Homology CDS 2163072 2164370 . - 0 ID=cds-WJG94866.1;Parent=gene-PUW35_10790;Dbxref=NCBI_GP:WJG94866.1;Name=WJG94866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228887.1;locus_tag=PUW35_10790;product=MATE family efflux transporter;protein_id=WJG94866.1;transl_table=11 CP118132.1 Genbank gene 2164441 2165457 . - . ID=gene-PUW35_10795;Name=PUW35_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10795 CP118132.1 Protein Homology CDS 2164441 2165457 . - 0 ID=cds-WJG94867.1;Parent=gene-PUW35_10795;Dbxref=NCBI_GP:WJG94867.1;Name=WJG94867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770936.1;locus_tag=PUW35_10795;product=CDP-paratose 2-epimerase;protein_id=WJG94867.1;transl_table=11 CP118132.1 Genbank gene 2165454 2166293 . - . ID=gene-PUW35_10800;Name=PUW35_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10800 CP118132.1 Protein Homology CDS 2165454 2166293 . - 0 ID=cds-WJG94868.1;Parent=gene-PUW35_10800;Dbxref=NCBI_GP:WJG94868.1;Name=WJG94868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697757.1;locus_tag=PUW35_10800;product=CDP-paratose synthase;protein_id=WJG94868.1;transl_table=11 CP118132.1 Genbank gene 2166330 2167643 . - . ID=gene-PUW35_10805;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=PUW35_10805 CP118132.1 Protein Homology CDS 2166330 2167643 . - 0 ID=cds-WJG94869.1;Parent=gene-PUW35_10805;Dbxref=NCBI_GP:WJG94869.1;Name=WJG94869.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=PUW35_10805;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WJG94869.1;transl_table=11 CP118132.1 Genbank gene 2167670 2168749 . - . ID=gene-PUW35_10810;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=PUW35_10810 CP118132.1 Protein Homology CDS 2167670 2168749 . - 0 ID=cds-WJG94870.1;Parent=gene-PUW35_10810;Dbxref=NCBI_GP:WJG94870.1;Name=WJG94870.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=PUW35_10810;product=CDP-glucose 4%2C6-dehydratase;protein_id=WJG94870.1;transl_table=11 CP118132.1 Genbank gene 2168754 2169527 . - . ID=gene-PUW35_10815;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=PUW35_10815 CP118132.1 Protein Homology CDS 2168754 2169527 . - 0 ID=cds-WJG94871.1;Parent=gene-PUW35_10815;Dbxref=NCBI_GP:WJG94871.1;Name=WJG94871.1;Ontology_term=GO:0009103,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=PUW35_10815;product=glucose-1-phosphate cytidylyltransferase;protein_id=WJG94871.1;transl_table=11 CP118132.1 Genbank pseudogene 2169524 2170516 . - . ID=gene-PUW35_10820;Name=PUW35_10820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_10820;pseudo=true CP118132.1 Protein Homology CDS 2169524 2170516 . - 0 ID=cds-PUW35_10820;Parent=gene-PUW35_10820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=PUW35_10820;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2170522 2171073 . - . ID=gene-PUW35_10825;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=PUW35_10825 CP118132.1 Protein Homology CDS 2170522 2171073 . - 0 ID=cds-WJG94872.1;Parent=gene-PUW35_10825;Dbxref=NCBI_GP:WJG94872.1;Name=WJG94872.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=PUW35_10825;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WJG94872.1;transl_table=11 CP118132.1 Genbank gene 2171074 2171952 . - . ID=gene-PUW35_10830;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=PUW35_10830 CP118132.1 Protein Homology CDS 2171074 2171952 . - 0 ID=cds-WJG95083.1;Parent=gene-PUW35_10830;Dbxref=NCBI_GP:WJG95083.1;Name=WJG95083.1;Ontology_term=GO:0045226,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=PUW35_10830;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WJG95083.1;transl_table=11 CP118132.1 Genbank gene 2172000 2172899 . - . ID=gene-PUW35_10835;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=PUW35_10835 CP118132.1 Protein Homology CDS 2172000 2172899 . - 0 ID=cds-WJG94873.1;Parent=gene-PUW35_10835;Dbxref=NCBI_GP:WJG94873.1;Name=WJG94873.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=PUW35_10835;product=dTDP-4-dehydrorhamnose reductase;protein_id=WJG94873.1;transl_table=11 CP118132.1 Genbank gene 2172899 2173984 . - . ID=gene-PUW35_10840;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=PUW35_10840 CP118132.1 Protein Homology CDS 2172899 2173984 . - 0 ID=cds-WJG94874.1;Parent=gene-PUW35_10840;Dbxref=NCBI_GP:WJG94874.1;Name=WJG94874.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=PUW35_10840;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WJG94874.1;transl_table=11 CP118132.1 Genbank gene 2174361 2175254 . - . ID=gene-PUW35_10845;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=PUW35_10845 CP118132.1 Protein Homology CDS 2174361 2175254 . - 0 ID=cds-WJG94875.1;Parent=gene-PUW35_10845;Dbxref=NCBI_GP:WJG94875.1;Name=WJG94875.1;Ontology_term=GO:0009225,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=PUW35_10845;product=GalU regulator GalF;protein_id=WJG94875.1;transl_table=11 CP118132.1 Genbank gene 2175432 2176835 . - . ID=gene-PUW35_10850;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=PUW35_10850 CP118132.1 Protein Homology CDS 2175432 2176835 . - 0 ID=cds-WJG94876.1;Parent=gene-PUW35_10850;Dbxref=NCBI_GP:WJG94876.1;Name=WJG94876.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=PUW35_10850;product=colanic acid biosynthesis protein WcaM;protein_id=WJG94876.1;transl_table=11 CP118132.1 Genbank gene 2176846 2178066 . - . ID=gene-PUW35_10855;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=PUW35_10855 CP118132.1 Protein Homology CDS 2176846 2178066 . - 0 ID=cds-WJG94877.1;Parent=gene-PUW35_10855;Dbxref=NCBI_GP:WJG94877.1;Name=WJG94877.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=PUW35_10855;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WJG94877.1;transl_table=11 CP118132.1 Genbank pseudogene 2178063 2179342 . - . ID=gene-PUW35_10860;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=pseudogene;locus_tag=PUW35_10860;pseudo=true CP118132.1 Protein Homology CDS 2178063 2179342 . - 0 ID=cds-PUW35_10860;Parent=gene-PUW35_10860;Note=frameshifted;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=PUW35_10860;product=colanic acid biosynthesis pyruvyl transferase WcaK;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2179364 2180842 . - . ID=gene-PUW35_10865;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=PUW35_10865 CP118132.1 Protein Homology CDS 2179364 2180842 . - 0 ID=cds-WJG94878.1;Parent=gene-PUW35_10865;Dbxref=NCBI_GP:WJG94878.1;Name=WJG94878.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=PUW35_10865;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WJG94878.1;transl_table=11 CP118132.1 Genbank gene 2180944 2182338 . - . ID=gene-PUW35_10870;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=PUW35_10870 CP118132.1 Protein Homology CDS 2180944 2182338 . - 0 ID=cds-WJG94879.1;Parent=gene-PUW35_10870;Dbxref=NCBI_GP:WJG94879.1;Name=WJG94879.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=PUW35_10870;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WJG94879.1;transl_table=11 CP118132.1 Genbank gene 2182392 2183762 . - . ID=gene-PUW35_10875;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=PUW35_10875 CP118132.1 Protein Homology CDS 2182392 2183762 . - 0 ID=cds-WJG94880.1;Parent=gene-PUW35_10875;Dbxref=NCBI_GP:WJG94880.1;Name=WJG94880.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=PUW35_10875;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WJG94880.1;transl_table=11 CP118132.1 Genbank gene 2183873 2185315 . - . ID=gene-PUW35_10880;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=PUW35_10880 CP118132.1 Protein Homology CDS 2183873 2185315 . - 0 ID=cds-WJG94881.1;Parent=gene-PUW35_10880;Dbxref=NCBI_GP:WJG94881.1;Name=WJG94881.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=PUW35_10880;product=mannose-1-phosphate guanyltransferase;protein_id=WJG94881.1;transl_table=11 CP118132.1 Genbank gene 2185312 2186535 . - . ID=gene-PUW35_10885;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=PUW35_10885 CP118132.1 Protein Homology CDS 2185312 2186535 . - 0 ID=cds-WJG94882.1;Parent=gene-PUW35_10885;Dbxref=NCBI_GP:WJG94882.1;Name=WJG94882.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=PUW35_10885;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WJG94882.1;transl_table=11 CP118132.1 Genbank gene 2186532 2187005 . - . ID=gene-PUW35_10890;Name=PUW35_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10890 CP118132.1 Protein Homology CDS 2186532 2187005 . - 0 ID=cds-WJG94883.1;Parent=gene-PUW35_10890;Dbxref=NCBI_GP:WJG94883.1;Name=WJG94883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=PUW35_10890;product=GDP-mannose mannosyl hydrolase;protein_id=WJG94883.1;transl_table=11 CP118132.1 Genbank gene 2187008 2187973 . - . ID=gene-PUW35_10895;Name=PUW35_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10895 CP118132.1 Protein Homology CDS 2187008 2187973 . - 0 ID=cds-WJG94884.1;Parent=gene-PUW35_10895;Dbxref=NCBI_GP:WJG94884.1;Name=WJG94884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=PUW35_10895;product=GDP-L-fucose synthase;protein_id=WJG94884.1;transl_table=11 CP118132.1 Genbank gene 2187976 2189097 . - . ID=gene-PUW35_10900;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=PUW35_10900 CP118132.1 Protein Homology CDS 2187976 2189097 . - 0 ID=cds-WJG94885.1;Parent=gene-PUW35_10900;Dbxref=NCBI_GP:WJG94885.1;Name=WJG94885.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=PUW35_10900;product=GDP-mannose 4%2C6-dehydratase;protein_id=WJG94885.1;transl_table=11 CP118132.1 Genbank pseudogene 2189121 2189674 . - . ID=gene-PUW35_10905;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=pseudogene;locus_tag=PUW35_10905;pseudo=true CP118132.1 Protein Homology CDS 2189121 2189674 . - 0 ID=cds-PUW35_10905;Parent=gene-PUW35_10905;Note=frameshifted;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=PUW35_10905;product=colanic acid biosynthesis acetyltransferase WcaF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2189690 2190436 . - . ID=gene-PUW35_10910;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=PUW35_10910 CP118132.1 Protein Homology CDS 2189690 2190436 . - 0 ID=cds-WJG94886.1;Parent=gene-PUW35_10910;Dbxref=NCBI_GP:WJG94886.1;Name=WJG94886.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=PUW35_10910;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WJG94886.1;transl_table=11 CP118132.1 Genbank gene 2190449 2191663 . - . ID=gene-PUW35_10915;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=PUW35_10915 CP118132.1 Protein Homology CDS 2190449 2191663 . - 0 ID=cds-WJG94887.1;Parent=gene-PUW35_10915;Dbxref=NCBI_GP:WJG94887.1;Name=WJG94887.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=PUW35_10915;product=colanic acid polymerase WcaD;protein_id=WJG94887.1;transl_table=11 CP118132.1 Genbank gene 2191638 2192855 . - . ID=gene-PUW35_10920;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=PUW35_10920 CP118132.1 Protein Homology CDS 2191638 2192855 . - 0 ID=cds-WJG94888.1;Parent=gene-PUW35_10920;Dbxref=NCBI_GP:WJG94888.1;Name=WJG94888.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=PUW35_10920;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WJG94888.1;transl_table=11 CP118132.1 Genbank gene 2192852 2193340 . - . ID=gene-PUW35_10925;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=PUW35_10925 CP118132.1 Protein Homology CDS 2192852 2193340 . - 0 ID=cds-WJG94889.1;Parent=gene-PUW35_10925;Dbxref=NCBI_GP:WJG94889.1;Name=WJG94889.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=PUW35_10925;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WJG94889.1;transl_table=11 CP118132.1 Genbank gene 2193343 2194185 . - . ID=gene-PUW35_10930;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=PUW35_10930 CP118132.1 Protein Homology CDS 2193343 2194185 . - 0 ID=cds-WJG94890.1;Parent=gene-PUW35_10930;Dbxref=NCBI_GP:WJG94890.1;Name=WJG94890.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=PUW35_10930;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WJG94890.1;transl_table=11 CP118132.1 Genbank gene 2194272 2196431 . - . ID=gene-PUW35_10935;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=PUW35_10935 CP118132.1 Protein Homology CDS 2194272 2196431 . - 0 ID=cds-WJG94891.1;Parent=gene-PUW35_10935;Dbxref=NCBI_GP:WJG94891.1;Name=WJG94891.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=PUW35_10935;product=tyrosine-protein kinase Wzc;protein_id=WJG94891.1;transl_table=11 CP118132.1 Genbank gene 2196428 2196877 . - . ID=gene-PUW35_10940;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=PUW35_10940 CP118132.1 Protein Homology CDS 2196428 2196877 . - 0 ID=cds-WJG94892.1;Parent=gene-PUW35_10940;Dbxref=NCBI_GP:WJG94892.1;Name=WJG94892.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=PUW35_10940;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WJG94892.1;transl_table=11 CP118132.1 Genbank gene 2196883 2198022 . - . ID=gene-PUW35_10945;Name=PUW35_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10945 CP118132.1 Protein Homology CDS 2196883 2198022 . - 0 ID=cds-WJG94893.1;Parent=gene-PUW35_10945;Dbxref=NCBI_GP:WJG94893.1;Name=WJG94893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=PUW35_10945;product=polysaccharide export protein;protein_id=WJG94893.1;transl_table=11 CP118132.1 Genbank gene 2198697 2200277 . + . ID=gene-PUW35_10950;Name=PUW35_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10950 CP118132.1 Protein Homology CDS 2198697 2200277 . + 0 ID=cds-WJG94894.1;Parent=gene-PUW35_10950;Dbxref=NCBI_GP:WJG94894.1;Name=WJG94894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=PUW35_10950;product=TerC family protein;protein_id=WJG94894.1;transl_table=11 CP118132.1 Genbank gene 2200363 2202219 . - . ID=gene-PUW35_10955;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=PUW35_10955 CP118132.1 Protein Homology CDS 2200363 2202219 . - 0 ID=cds-WJG94895.1;Parent=gene-PUW35_10955;Dbxref=NCBI_GP:WJG94895.1;Name=WJG94895.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=PUW35_10955;product=outer membrane assembly protein AsmA;protein_id=WJG94895.1;transl_table=11 CP118132.1 Genbank gene 2202258 2202839 . - . ID=gene-PUW35_10960;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=PUW35_10960 CP118132.1 Protein Homology CDS 2202258 2202839 . - 0 ID=cds-WJG94896.1;Parent=gene-PUW35_10960;Dbxref=NCBI_GP:WJG94896.1;Name=WJG94896.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=PUW35_10960;product=dCTP deaminase;protein_id=WJG94896.1;transl_table=11 CP118132.1 Genbank gene 2202930 2203571 . - . ID=gene-PUW35_10965;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=PUW35_10965 CP118132.1 Protein Homology CDS 2202930 2203571 . - 0 ID=cds-WJG94897.1;Parent=gene-PUW35_10965;Dbxref=NCBI_GP:WJG94897.1;Name=WJG94897.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=PUW35_10965;product=uridine kinase;protein_id=WJG94897.1;transl_table=11 CP118132.1 Genbank gene 2203902 2206892 . + . ID=gene-PUW35_10970;Name=PUW35_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_10970 CP118132.1 Protein Homology CDS 2203902 2206892 . + 0 ID=cds-WJG94898.1;Parent=gene-PUW35_10970;Dbxref=NCBI_GP:WJG94898.1;Name=WJG94898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=PUW35_10970;product=MASE1 domain-containing protein;protein_id=WJG94898.1;transl_table=11 CP118132.1 Genbank gene 2206860 2207729 . - . ID=gene-PUW35_10975;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=PUW35_10975 CP118132.1 Protein Homology CDS 2206860 2207729 . - 0 ID=cds-WJG94899.1;Parent=gene-PUW35_10975;Dbxref=NCBI_GP:WJG94899.1;Name=WJG94899.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=PUW35_10975;product=DNA-3-methyladenine glycosylase 2;protein_id=WJG94899.1;transl_table=11 CP118132.1 Genbank gene 2207863 2209215 . + . ID=gene-PUW35_10980;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=PUW35_10980 CP118132.1 Protein Homology CDS 2207863 2209215 . + 0 ID=cds-WJG94900.1;Parent=gene-PUW35_10980;Dbxref=NCBI_GP:WJG94900.1;Name=WJG94900.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=PUW35_10980;product=molecular chaperone;protein_id=WJG94900.1;transl_table=11 CP118132.1 Genbank gene 2209314 2209373 . - . ID=gene-PUW35_10985;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=PUW35_10985 CP118132.1 Protein Homology CDS 2209314 2209373 . - 0 ID=cds-WJG95084.1;Parent=gene-PUW35_10985;Dbxref=NCBI_GP:WJG95084.1;Name=WJG95084.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=PUW35_10985;product=type I toxin-antitoxin system toxin IbsA;protein_id=WJG95084.1;transl_table=11 CP118132.1 Genbank gene 2209656 2210897 . + . ID=gene-PUW35_10990;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=PUW35_10990 CP118132.1 Protein Homology CDS 2209656 2210897 . + 0 ID=cds-WJG94901.1;Parent=gene-PUW35_10990;Dbxref=NCBI_GP:WJG94901.1;Name=WJG94901.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=PUW35_10990;product=multidrug efflux RND transporter subunit MdtA;protein_id=WJG94901.1;transl_table=11 CP118132.1 Genbank pseudogene 2210897 2214018 . + . ID=gene-PUW35_10995;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=pseudogene;locus_tag=PUW35_10995;pseudo=true CP118132.1 Protein Homology CDS 2210897 2214018 . + 0 ID=cds-PUW35_10995;Parent=gene-PUW35_10995;Note=frameshifted;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=PUW35_10995;product=multidrug efflux RND transporter permease subunit MdtB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2214019 2217099 . + . ID=gene-PUW35_11000;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=PUW35_11000 CP118132.1 Protein Homology CDS 2214019 2217099 . + 0 ID=cds-WJG94902.1;Parent=gene-PUW35_11000;Dbxref=NCBI_GP:WJG94902.1;Name=WJG94902.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=PUW35_11000;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WJG94902.1;transl_table=11 CP118132.1 Genbank pseudogene 2217096 2218506 . + . ID=gene-PUW35_11005;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=pseudogene;locus_tag=PUW35_11005;pseudo=true CP118132.1 Protein Homology CDS 2217096 2218506 . + 0 ID=cds-PUW35_11005;Parent=gene-PUW35_11005;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=PUW35_11005;product=multidrug transporter subunit MdtD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2218506 2219909 . + . ID=gene-PUW35_11010;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=PUW35_11010 CP118132.1 Protein Homology CDS 2218506 2219909 . + 0 ID=cds-WJG94903.1;Parent=gene-PUW35_11010;Dbxref=NCBI_GP:WJG94903.1;Name=WJG94903.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=PUW35_11010;product=two-component system sensor histidine kinase BaeS;protein_id=WJG94903.1;transl_table=11 CP118132.1 Genbank gene 2219906 2220628 . + . ID=gene-PUW35_11015;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=PUW35_11015 CP118132.1 Protein Homology CDS 2219906 2220628 . + 0 ID=cds-WJG94904.1;Parent=gene-PUW35_11015;Dbxref=NCBI_GP:WJG94904.1;Name=WJG94904.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=PUW35_11015;product=two-component system response regulator BaeR;protein_id=WJG94904.1;transl_table=11 CP118132.1 Genbank gene 2220897 2222099 . + . ID=gene-PUW35_11020;Name=PUW35_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11020 CP118132.1 Protein Homology CDS 2220897 2222099 . + 0 ID=cds-WJG94905.1;Parent=gene-PUW35_11020;Dbxref=NCBI_GP:WJG94905.1;Name=WJG94905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=PUW35_11020;product=cytoplasmic protein;protein_id=WJG94905.1;transl_table=11 CP118132.1 Genbank pseudogene 2222099 2222814 . + . ID=gene-PUW35_11025;Name=PUW35_11025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11025;pseudo=true CP118132.1 Protein Homology CDS 2222099 2222814 . + 0 ID=cds-PUW35_11025;Parent=gene-PUW35_11025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=PUW35_11025;product=DUF1266 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2222825 2224936 . + . ID=gene-PUW35_11030;Name=PUW35_11030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11030;pseudo=true CP118132.1 Protein Homology CDS 2222825 2224936 . + 0 ID=cds-PUW35_11030;Parent=gene-PUW35_11030;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=PUW35_11030;product=DUF4034 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2225052 2226412 . + . ID=gene-PUW35_11035;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=pseudogene;locus_tag=PUW35_11035;pseudo=true CP118132.1 Protein Homology CDS 2225052 2226412 . + 0 ID=cds-PUW35_11035;Parent=gene-PUW35_11035;Note=frameshifted;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=PUW35_11035;product=tRNA 5-hydroxyuridine modification protein YegQ;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2226863 2227035 . + . ID=gene-PUW35_11040;Name=PUW35_11040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11040;pseudo=true CP118132.1 Protein Homology CDS 2226863 2227035 . + 0 ID=cds-PUW35_11040;Parent=gene-PUW35_11040;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=PUW35_11040;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2227051 2227464 . - . ID=gene-PUW35_11045;Name=PUW35_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11045 CP118132.1 Protein Homology CDS 2227051 2227464 . - 0 ID=cds-WJG94906.1;Parent=gene-PUW35_11045;Dbxref=NCBI_GP:WJG94906.1;Name=WJG94906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=PUW35_11045;product=CesT family type III secretion system chaperone;protein_id=WJG94906.1;transl_table=11 CP118132.1 Genbank gene 2227586 2227921 . - . ID=gene-PUW35_11050;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=PUW35_11050 CP118132.1 Protein Homology CDS 2227586 2227921 . - 0 ID=cds-WJG94907.1;Parent=gene-PUW35_11050;Dbxref=NCBI_GP:WJG94907.1;Name=WJG94907.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=PUW35_11050;product=type III secretion system effector SteD;protein_id=WJG94907.1;transl_table=11 CP118132.1 Genbank gene 2228483 2229382 . + . ID=gene-PUW35_11055;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=PUW35_11055 CP118132.1 Protein Homology CDS 2228483 2229382 . + 0 ID=cds-WJG94908.1;Parent=gene-PUW35_11055;Dbxref=NCBI_GP:WJG94908.1;Name=WJG94908.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;gene=yegS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=PUW35_11055;product=lipid kinase YegS;protein_id=WJG94908.1;transl_table=11 CP118132.1 Genbank gene 2229435 2230487 . - . ID=gene-PUW35_11060;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=PUW35_11060 CP118132.1 Protein Homology CDS 2229435 2230487 . - 0 ID=cds-WJG94909.1;Parent=gene-PUW35_11060;Dbxref=NCBI_GP:WJG94909.1;Name=WJG94909.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=PUW35_11060;product=class I fructose-bisphosphate aldolase;protein_id=WJG94909.1;transl_table=11 CP118132.1 Genbank gene 2230741 2232012 . + . ID=gene-PUW35_11065;Name=PUW35_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11065 CP118132.1 Protein Homology CDS 2230741 2232012 . + 0 ID=cds-WJG94910.1;Parent=gene-PUW35_11065;Dbxref=NCBI_GP:WJG94910.1;Name=WJG94910.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=PUW35_11065;product=nucleoside permease;protein_id=WJG94910.1;transl_table=11 CP118132.1 Genbank gene 2232009 2233013 . + . ID=gene-PUW35_11070;Name=PUW35_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11070 CP118132.1 Protein Homology CDS 2232009 2233013 . + 0 ID=cds-WJG94911.1;Parent=gene-PUW35_11070;Dbxref=NCBI_GP:WJG94911.1;Name=WJG94911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=PUW35_11070;product=ADP-ribosylglycohydrolase family protein;protein_id=WJG94911.1;transl_table=11 CP118132.1 Genbank gene 2233010 2233975 . + . ID=gene-PUW35_11075;Name=PUW35_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11075 CP118132.1 Protein Homology CDS 2233010 2233975 . + 0 ID=cds-WJG94912.1;Parent=gene-PUW35_11075;Dbxref=NCBI_GP:WJG94912.1;Name=WJG94912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=PUW35_11075;product=PfkB family carbohydrate kinase;protein_id=WJG94912.1;transl_table=11 CP118132.1 Genbank gene 2233949 2234695 . - . ID=gene-PUW35_11080;Name=PUW35_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11080 CP118132.1 Protein Homology CDS 2233949 2234695 . - 0 ID=cds-WJG94913.1;Parent=gene-PUW35_11080;Dbxref=NCBI_GP:WJG94913.1;Name=WJG94913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=PUW35_11080;product=GntR family transcriptional regulator;protein_id=WJG94913.1;transl_table=11 CP118132.1 Genbank gene 2234731 2235531 . - . ID=gene-PUW35_11085;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=PUW35_11085 CP118132.1 Protein Homology CDS 2234731 2235531 . - 0 ID=cds-WJG94914.1;Parent=gene-PUW35_11085;Dbxref=NCBI_GP:WJG94914.1;Name=WJG94914.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=PUW35_11085;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WJG94914.1;transl_table=11 CP118132.1 Genbank gene 2235518 2236315 . - . ID=gene-PUW35_11090;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=PUW35_11090 CP118132.1 Protein Homology CDS 2235518 2236315 . - 0 ID=cds-WJG94915.1;Parent=gene-PUW35_11090;Dbxref=NCBI_GP:WJG94915.1;Name=WJG94915.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=PUW35_11090;product=hydroxyethylthiazole kinase;protein_id=WJG94915.1;transl_table=11 CP118132.1 cmsearch riboswitch 2236347 2236443 . - . ID=id-CP118132.1:2236347..2236443;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118132.1 Genbank gene 2236725 2237039 . + . ID=gene-PUW35_11095;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=PUW35_11095 CP118132.1 Protein Homology CDS 2236725 2237039 . + 0 ID=cds-WJG94916.1;Parent=gene-PUW35_11095;Dbxref=NCBI_GP:WJG94916.1;Name=WJG94916.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=PUW35_11095;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WJG94916.1;transl_table=11 CP118132.1 Genbank gene 2237083 2238105 . - . ID=gene-PUW35_11100;Name=PUW35_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11100 CP118132.1 Protein Homology CDS 2237083 2238105 . - 0 ID=cds-WJG94917.1;Parent=gene-PUW35_11100;Dbxref=NCBI_GP:WJG94917.1;Name=WJG94917.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=PUW35_11100;product=fimbrial protein;protein_id=WJG94917.1;transl_table=11 CP118132.1 Genbank pseudogene 2238121 2240608 . - . ID=gene-PUW35_11105;Name=PUW35_11105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11105;pseudo=true CP118132.1 Protein Homology CDS 2238121 2240608 . - 0 ID=cds-PUW35_11105;Parent=gene-PUW35_11105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=PUW35_11105;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2240637 2241317 . - . ID=gene-PUW35_11110;Name=PUW35_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11110 CP118132.1 Protein Homology CDS 2240637 2241317 . - 0 ID=cds-WJG94918.1;Parent=gene-PUW35_11110;Dbxref=NCBI_GP:WJG94918.1;Name=WJG94918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=PUW35_11110;product=fimbrial assembly chaperone;protein_id=WJG94918.1;transl_table=11 CP118132.1 Genbank gene 2241379 2241912 . - . ID=gene-PUW35_11115;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=PUW35_11115 CP118132.1 Protein Homology CDS 2241379 2241912 . - 0 ID=cds-WJG94919.1;Parent=gene-PUW35_11115;Dbxref=NCBI_GP:WJG94919.1;Name=WJG94919.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=PUW35_11115;product=fimbrial protein YehD;protein_id=WJG94919.1;transl_table=11 CP118132.1 Genbank gene 2242190 2242471 . - . ID=gene-PUW35_11120;Name=PUW35_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11120 CP118132.1 Protein Homology CDS 2242190 2242471 . - 0 ID=cds-WJG94920.1;Parent=gene-PUW35_11120;Dbxref=NCBI_GP:WJG94920.1;Name=WJG94920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=PUW35_11120;product=YehE family protein;protein_id=WJG94920.1;transl_table=11 CP118132.1 Genbank gene 2242748 2243857 . - . ID=gene-PUW35_11125;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=PUW35_11125 CP118132.1 Protein Homology CDS 2242748 2243857 . - 0 ID=cds-WJG94921.1;Parent=gene-PUW35_11125;Dbxref=NCBI_GP:WJG94921.1;Name=WJG94921.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=PUW35_11125;product=iron-sulfur cluster carrier protein ApbC;protein_id=WJG94921.1;transl_table=11 CP118132.1 Genbank gene 2244022 2246055 . + . ID=gene-PUW35_11130;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=PUW35_11130 CP118132.1 Protein Homology CDS 2244022 2246055 . + 0 ID=cds-WJG94922.1;Parent=gene-PUW35_11130;Dbxref=NCBI_GP:WJG94922.1;Name=WJG94922.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=PUW35_11130;product=methionine--tRNA ligase;protein_id=WJG94922.1;transl_table=11 CP118132.1 Genbank gene 2246296 2246754 . + . ID=gene-PUW35_11135;Name=PUW35_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11135 CP118132.1 Protein Homology CDS 2246296 2246754 . + 0 ID=cds-WJG94923.1;Parent=gene-PUW35_11135;Dbxref=NCBI_GP:WJG94923.1;Name=WJG94923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=PUW35_11135;product=YehR family lipoprotein;protein_id=WJG94923.1;transl_table=11 CP118132.1 Genbank pseudogene 2246926 2247454 . + . ID=gene-PUW35_11140;Name=PUW35_11140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11140;pseudo=true CP118132.1 Protein Homology CDS 2246926 2247454 . + 0 ID=cds-PUW35_11140;Parent=gene-PUW35_11140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=PUW35_11140;product=YehR family lipoprotein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2247511 2247978 . - . ID=gene-PUW35_11145;Name=PUW35_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11145 CP118132.1 Protein Homology CDS 2247511 2247978 . - 0 ID=cds-WJG94924.1;Parent=gene-PUW35_11145;Dbxref=NCBI_GP:WJG94924.1;Name=WJG94924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=PUW35_11145;product=DUF1456 family protein;protein_id=WJG94924.1;transl_table=11 CP118132.1 Genbank gene 2248025 2248744 . - . ID=gene-PUW35_11150;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=PUW35_11150 CP118132.1 Protein Homology CDS 2248025 2248744 . - 0 ID=cds-WJG94925.1;Parent=gene-PUW35_11150;Dbxref=NCBI_GP:WJG94925.1;Name=WJG94925.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=PUW35_11150;product=two-component system response regulator BtsR;protein_id=WJG94925.1;transl_table=11 CP118132.1 Genbank gene 2248741 2250426 . - . ID=gene-PUW35_11155;Name=PUW35_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11155 CP118132.1 Protein Homology CDS 2248741 2250426 . - 0 ID=cds-WJG94926.1;Parent=gene-PUW35_11155;Dbxref=NCBI_GP:WJG94926.1;Name=WJG94926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=PUW35_11155;product=sensor histidine kinase;protein_id=WJG94926.1;transl_table=11 CP118132.1 Genbank gene 2250649 2251380 . + . ID=gene-PUW35_11160;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=PUW35_11160 CP118132.1 Protein Homology CDS 2250649 2251380 . + 0 ID=cds-WJG94927.1;Parent=gene-PUW35_11160;Dbxref=NCBI_GP:WJG94927.1;Name=WJG94927.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=PUW35_11160;product=HTH-type transcriptional regulator MlrA;protein_id=WJG94927.1;transl_table=11 CP118132.1 Genbank gene 2251440 2251547 . + . ID=gene-PUW35_11165;Name=PUW35_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11165 CP118132.1 Protein Homology CDS 2251440 2251547 . + 0 ID=cds-WJG94928.1;Parent=gene-PUW35_11165;Dbxref=NCBI_GP:WJG94928.1;Name=WJG94928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=PUW35_11165;product=protein YohO;protein_id=WJG94928.1;transl_table=11 CP118132.1 Genbank gene 2251528 2252259 . - . ID=gene-PUW35_11170;Name=PUW35_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11170 CP118132.1 Protein Homology CDS 2251528 2252259 . - 0 ID=cds-WJG94929.1;Parent=gene-PUW35_11170;Dbxref=NCBI_GP:WJG94929.1;Name=WJG94929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=PUW35_11170;product=ABC transporter permease;protein_id=WJG94929.1;transl_table=11 CP118132.1 Genbank gene 2252243 2253190 . - . ID=gene-PUW35_11175;Name=PUW35_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11175 CP118132.1 Protein Homology CDS 2252243 2253190 . - 0 ID=cds-WJG94930.1;Parent=gene-PUW35_11175;Dbxref=NCBI_GP:WJG94930.1;Name=WJG94930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=PUW35_11175;product=ABC transporter ATP-binding protein;protein_id=WJG94930.1;transl_table=11 CP118132.1 Genbank gene 2253183 2254352 . - . ID=gene-PUW35_11180;Name=PUW35_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11180 CP118132.1 Protein Homology CDS 2253183 2254352 . - 0 ID=cds-WJG94931.1;Parent=gene-PUW35_11180;Dbxref=NCBI_GP:WJG94931.1;Name=WJG94931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=PUW35_11180;product=ABC transporter permease;protein_id=WJG94931.1;transl_table=11 CP118132.1 Genbank gene 2254356 2255273 . - . ID=gene-PUW35_11185;Name=PUW35_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11185 CP118132.1 Protein Homology CDS 2254356 2255273 . - 0 ID=cds-WJG94932.1;Parent=gene-PUW35_11185;Dbxref=NCBI_GP:WJG94932.1;Name=WJG94932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=PUW35_11185;product=ABC transporter substrate-binding protein;protein_id=WJG94932.1;transl_table=11 CP118132.1 Genbank gene 2255454 2257751 . - . ID=gene-PUW35_11190;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=PUW35_11190 CP118132.1 Protein Homology CDS 2255454 2257751 . - 0 ID=cds-WJG94933.1;Parent=gene-PUW35_11190;Dbxref=NCBI_GP:WJG94933.1;Name=WJG94933.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=PUW35_11190;product=beta-glucosidase BglX;protein_id=WJG94933.1;transl_table=11 CP118132.1 Genbank gene 2258018 2259748 . + . ID=gene-PUW35_11195;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=PUW35_11195 CP118132.1 Protein Homology CDS 2258018 2259748 . + 0 ID=cds-WJG94934.1;Parent=gene-PUW35_11195;Dbxref=NCBI_GP:WJG94934.1;Name=WJG94934.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=PUW35_11195;product=D-lactate dehydrogenase;protein_id=WJG94934.1;transl_table=11 CP118132.1 Genbank gene 2259807 2260754 . - . ID=gene-PUW35_11200;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=PUW35_11200 CP118132.1 Protein Homology CDS 2259807 2260754 . - 0 ID=cds-WJG94935.1;Parent=gene-PUW35_11200;Dbxref=NCBI_GP:WJG94935.1;Name=WJG94935.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=PUW35_11200;product=D-alanyl-D-alanine endopeptidase;protein_id=WJG94935.1;transl_table=11 CP118132.1 Genbank gene 2260920 2261507 . - . ID=gene-PUW35_11205;Name=PUW35_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11205 CP118132.1 Protein Homology CDS 2260920 2261507 . - 0 ID=cds-WJG94936.1;Parent=gene-PUW35_11205;Dbxref=NCBI_GP:WJG94936.1;Name=WJG94936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=PUW35_11205;product=Yip1 family protein;protein_id=WJG94936.1;transl_table=11 CP118132.1 Genbank gene 2261666 2262235 . + . ID=gene-PUW35_11210;Name=PUW35_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11210 CP118132.1 Protein Homology CDS 2261666 2262235 . + 0 ID=cds-WJG94937.1;Parent=gene-PUW35_11210;Dbxref=NCBI_GP:WJG94937.1;Name=WJG94937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=PUW35_11210;product=DedA family protein;protein_id=WJG94937.1;transl_table=11 CP118132.1 Genbank pseudogene 2262284 2263046 . - . ID=gene-PUW35_11215;Name=PUW35_11215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11215;pseudo=true CP118132.1 Protein Homology CDS 2262284 2263046 . - 0 ID=cds-PUW35_11215;Parent=gene-PUW35_11215;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=PUW35_11215;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2263112 2264547 . - . ID=gene-PUW35_11220;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=pseudogene;locus_tag=PUW35_11220;pseudo=true CP118132.1 Protein Homology CDS 2263112 2264547 . - 0 ID=cds-PUW35_11220;Parent=gene-PUW35_11220;Note=frameshifted;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=PUW35_11220;product=multidrug resistance outer membrane protein MdtQ;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2264865 2264948 . + . ID=gene-PUW35_11225;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=PUW35_11225 CP118132.1 Protein Homology CDS 2264865 2264948 . + 0 ID=cds-WJG95085.1;Parent=gene-PUW35_11225;Dbxref=NCBI_GP:WJG95085.1;Name=WJG95085.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=PUW35_11225;product=small membrane protein YohP;protein_id=WJG95085.1;transl_table=11 CP118132.1 Genbank gene 2265006 2265944 . - . ID=gene-PUW35_11230;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=PUW35_11230 CP118132.1 Protein Homology CDS 2265006 2265944 . - 0 ID=cds-WJG94938.1;Parent=gene-PUW35_11230;Dbxref=NCBI_GP:WJG94938.1;Name=WJG94938.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=PUW35_11230;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WJG94938.1;transl_table=11 CP118132.1 Genbank gene 2266053 2267246 . - . ID=gene-PUW35_11235;Name=PUW35_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11235 CP118132.1 Protein Homology CDS 2266053 2267246 . - 0 ID=cds-WJG94939.1;Parent=gene-PUW35_11235;Dbxref=NCBI_GP:WJG94939.1;Name=WJG94939.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=PUW35_11235;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WJG94939.1;transl_table=11 CP118132.1 Genbank gene 2267261 2267905 . - . ID=gene-PUW35_11240;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=PUW35_11240 CP118132.1 Protein Homology CDS 2267261 2267905 . - 0 ID=cds-WJG94940.1;Parent=gene-PUW35_11240;Dbxref=NCBI_GP:WJG94940.1;Name=WJG94940.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=PUW35_11240;product=maleylacetoacetate isomerase;protein_id=WJG94940.1;transl_table=11 CP118132.1 Genbank gene 2267914 2268615 . - . ID=gene-PUW35_11245;Name=PUW35_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11245 CP118132.1 Protein Homology CDS 2267914 2268615 . - 0 ID=cds-WJG94941.1;Parent=gene-PUW35_11245;Dbxref=NCBI_GP:WJG94941.1;Name=WJG94941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=PUW35_11245;product=fumarylacetoacetate hydrolase family protein;protein_id=WJG94941.1;transl_table=11 CP118132.1 Genbank gene 2268631 2269668 . - . ID=gene-PUW35_11250;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=PUW35_11250 CP118132.1 Protein Homology CDS 2268631 2269668 . - 0 ID=cds-WJG94942.1;Parent=gene-PUW35_11250;Dbxref=NCBI_GP:WJG94942.1;Name=WJG94942.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=PUW35_11250;product=gentisate 1%2C2-dioxygenase;protein_id=WJG94942.1;transl_table=11 CP118132.1 Genbank gene 2269680 2271038 . - . ID=gene-PUW35_11255;Name=PUW35_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11255 CP118132.1 Protein Homology CDS 2269680 2271038 . - 0 ID=cds-WJG94943.1;Parent=gene-PUW35_11255;Dbxref=NCBI_GP:WJG94943.1;Name=WJG94943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=PUW35_11255;product=aromatic acid/H+ symport family MFS transporter;protein_id=WJG94943.1;transl_table=11 CP118132.1 Genbank gene 2271164 2272021 . + . ID=gene-PUW35_11260;Name=PUW35_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11260 CP118132.1 Protein Homology CDS 2271164 2272021 . + 0 ID=cds-WJG94944.1;Parent=gene-PUW35_11260;Dbxref=NCBI_GP:WJG94944.1;Name=WJG94944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024655.1;locus_tag=PUW35_11260;product=LysR family transcriptional regulator;protein_id=WJG94944.1;transl_table=11 CP118132.1 Genbank gene 2272065 2272463 . + . ID=gene-PUW35_11265;Name=PUW35_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11265 CP118132.1 Protein Homology CDS 2272065 2272463 . + 0 ID=cds-WJG94945.1;Parent=gene-PUW35_11265;Dbxref=NCBI_GP:WJG94945.1;Name=WJG94945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=PUW35_11265;product=CidA/LrgA family protein;protein_id=WJG94945.1;transl_table=11 CP118132.1 Genbank gene 2272460 2273155 . + . ID=gene-PUW35_11270;Name=PUW35_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11270 CP118132.1 Protein Homology CDS 2272460 2273155 . + 0 ID=cds-WJG94946.1;Parent=gene-PUW35_11270;Dbxref=NCBI_GP:WJG94946.1;Name=WJG94946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=PUW35_11270;product=CidB/LrgB family autolysis modulator;protein_id=WJG94946.1;transl_table=11 CP118132.1 Genbank gene 2273309 2274193 . + . ID=gene-PUW35_11275;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=PUW35_11275 CP118132.1 Protein Homology CDS 2273309 2274193 . + 0 ID=cds-WJG94947.1;Parent=gene-PUW35_11275;Dbxref=NCBI_GP:WJG94947.1;Name=WJG94947.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=PUW35_11275;product=cytidine deaminase;protein_id=WJG94947.1;transl_table=11 CP118132.1 Genbank gene 2274370 2275089 . + . ID=gene-PUW35_11280;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=PUW35_11280 CP118132.1 Protein Homology CDS 2274370 2275089 . + 0 ID=cds-WJG94948.1;Parent=gene-PUW35_11280;Dbxref=NCBI_GP:WJG94948.1;Name=WJG94948.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=PUW35_11280;product=outer membrane permeability protein SanA;protein_id=WJG94948.1;transl_table=11 CP118132.1 Genbank gene 2275086 2275331 . + . ID=gene-PUW35_11285;Name=PUW35_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11285 CP118132.1 Protein Homology CDS 2275086 2275331 . + 0 ID=cds-WJG94949.1;Parent=gene-PUW35_11285;Dbxref=NCBI_GP:WJG94949.1;Name=WJG94949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=PUW35_11285;product=DUF2542 family protein;protein_id=WJG94949.1;transl_table=11 CP118132.1 Genbank gene 2275536 2276777 . + . ID=gene-PUW35_11290;Name=PUW35_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11290 CP118132.1 Protein Homology CDS 2275536 2276777 . + 0 ID=cds-WJG94950.1;Parent=gene-PUW35_11290;Dbxref=NCBI_GP:WJG94950.1;Name=WJG94950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=PUW35_11290;product=NAD(P)-dependent oxidoreductase;protein_id=WJG94950.1;transl_table=11 CP118132.1 Genbank gene 2276771 2278006 . + . ID=gene-PUW35_11295;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=PUW35_11295 CP118132.1 Protein Homology CDS 2276771 2278006 . + 0 ID=cds-WJG94951.1;Parent=gene-PUW35_11295;Dbxref=NCBI_GP:WJG94951.1;Name=WJG94951.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=PUW35_11295;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WJG94951.1;transl_table=11 CP118132.1 Genbank gene 2278081 2279091 . - . ID=gene-PUW35_11300;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=PUW35_11300 CP118132.1 Protein Homology CDS 2278081 2279091 . - 0 ID=cds-WJG94952.1;Parent=gene-PUW35_11300;Dbxref=NCBI_GP:WJG94952.1;Name=WJG94952.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=PUW35_11300;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WJG94952.1;transl_table=11 CP118132.1 Genbank pseudogene 2279107 2280625 . - . ID=gene-PUW35_11305;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=pseudogene;locus_tag=PUW35_11305;pseudo=true CP118132.1 Protein Homology CDS 2279107 2280625 . - 0 ID=cds-PUW35_11305;Parent=gene-PUW35_11305;Note=frameshifted;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=PUW35_11305;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2280759 2281757 . - . ID=gene-PUW35_11310;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=PUW35_11310 CP118132.1 Protein Homology CDS 2280759 2281757 . - 0 ID=cds-WJG94953.1;Parent=gene-PUW35_11310;Dbxref=NCBI_GP:WJG94953.1;Name=WJG94953.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=PUW35_11310;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WJG94953.1;transl_table=11 CP118132.1 Genbank gene 2282256 2283278 . - . ID=gene-PUW35_11315;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=PUW35_11315 CP118132.1 Protein Homology CDS 2282256 2283278 . - 0 ID=cds-WJG94954.1;Parent=gene-PUW35_11315;Dbxref=NCBI_GP:WJG94954.1;Name=WJG94954.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=PUW35_11315;product=HTH-type transcriptional regulator GalS;protein_id=WJG94954.1;transl_table=11 CP118132.1 Genbank gene 2283428 2284570 . - . ID=gene-PUW35_11320;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=PUW35_11320 CP118132.1 Protein Homology CDS 2283428 2284570 . - 0 ID=cds-WJG94955.1;Parent=gene-PUW35_11320;Dbxref=NCBI_GP:WJG94955.1;Name=WJG94955.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=PUW35_11320;product=DUF418 domain-containing protein YeiB;protein_id=WJG94955.1;transl_table=11 CP118132.1 Genbank gene 2284585 2285253 . - . ID=gene-PUW35_11325;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=PUW35_11325 CP118132.1 Protein Homology CDS 2284585 2285253 . - 0 ID=cds-WJG94956.1;Parent=gene-PUW35_11325;Dbxref=NCBI_GP:WJG94956.1;Name=WJG94956.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=PUW35_11325;product=GTP cyclohydrolase I FolE;protein_id=WJG94956.1;transl_table=11 CP118132.1 Genbank gene 2285583 2286440 . + . ID=gene-PUW35_11330;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=PUW35_11330 CP118132.1 Protein Homology CDS 2285583 2286440 . + 0 ID=cds-WJG94957.1;Parent=gene-PUW35_11330;Dbxref=NCBI_GP:WJG94957.1;Name=WJG94957.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=PUW35_11330;product=S-formylglutathione hydrolase;protein_id=WJG94957.1;transl_table=11 CP118132.1 Genbank gene 2286429 2286818 . - . ID=gene-PUW35_11335;Name=PUW35_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11335 CP118132.1 Protein Homology CDS 2286429 2286818 . - 0 ID=cds-WJG94958.1;Parent=gene-PUW35_11335;Dbxref=NCBI_GP:WJG94958.1;Name=WJG94958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=PUW35_11335;product=helix-turn-helix transcriptional regulator;protein_id=WJG94958.1;transl_table=11 CP118132.1 Genbank gene 2286823 2288190 . - . ID=gene-PUW35_11340;Name=PUW35_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11340 CP118132.1 Protein Homology CDS 2286823 2288190 . - 0 ID=cds-WJG94959.1;Parent=gene-PUW35_11340;Dbxref=NCBI_GP:WJG94959.1;Name=WJG94959.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=PUW35_11340;product=L-serine ammonia-lyase;protein_id=WJG94959.1;transl_table=11 CP118132.1 Genbank gene 2288407 2289294 . + . ID=gene-PUW35_11345;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PUW35_11345 CP118132.1 Protein Homology CDS 2288407 2289294 . + 0 ID=cds-WJG94960.1;Parent=gene-PUW35_11345;Dbxref=NCBI_GP:WJG94960.1;Name=WJG94960.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=PUW35_11345;product=phosphoserine phosphatase SerB;protein_id=WJG94960.1;transl_table=11 CP118132.1 Genbank pseudogene 2289327 2290647 . + . ID=gene-PUW35_11350;Name=PUW35_11350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11350;pseudo=true CP118132.1 Protein Homology CDS 2289327 2290647 . + 0 ID=cds-PUW35_11350;Parent=gene-PUW35_11350;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=PUW35_11350;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2290691 2292681 . - . ID=gene-PUW35_11355;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=pseudogene;locus_tag=PUW35_11355;pseudo=true CP118132.1 Protein Homology CDS 2290691 2292681 . - 0 ID=cds-PUW35_11355;Parent=gene-PUW35_11355;Note=frameshifted;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=PUW35_11355;product=catecholate siderophore receptor CirA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2293027 2294496 . - . ID=gene-PUW35_11360;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=PUW35_11360 CP118132.1 Protein Homology CDS 2293027 2294496 . - 0 ID=cds-WJG94961.1;Parent=gene-PUW35_11360;Dbxref=NCBI_GP:WJG94961.1;Name=WJG94961.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=PUW35_11360;product=lysine-specific permease;protein_id=WJG94961.1;transl_table=11 CP118132.1 Genbank gene 2294686 2295549 . - . ID=gene-PUW35_11365;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=PUW35_11365 CP118132.1 Protein Homology CDS 2294686 2295549 . - 0 ID=cds-WJG94962.1;Parent=gene-PUW35_11365;Dbxref=NCBI_GP:WJG94962.1;Name=WJG94962.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=PUW35_11365;product=DNA-binding transcriptional regulator YeiE;protein_id=WJG94962.1;transl_table=11 CP118132.1 Genbank gene 2295670 2296719 . + . ID=gene-PUW35_11370;Name=PUW35_11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11370 CP118132.1 Protein Homology CDS 2295670 2296719 . + 0 ID=cds-WJG94963.1;Parent=gene-PUW35_11370;Dbxref=NCBI_GP:WJG94963.1;Name=WJG94963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=PUW35_11370;product=YeiH family protein;protein_id=WJG94963.1;transl_table=11 CP118132.1 Genbank gene 2296798 2297655 . + . ID=gene-PUW35_11375;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=PUW35_11375 CP118132.1 Protein Homology CDS 2296798 2297655 . + 0 ID=cds-WJG94964.1;Parent=gene-PUW35_11375;Dbxref=NCBI_GP:WJG94964.1;Name=WJG94964.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=PUW35_11375;product=deoxyribonuclease IV;protein_id=WJG94964.1;transl_table=11 CP118132.1 Genbank gene 2297720 2299408 . - . ID=gene-PUW35_11380;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=PUW35_11380 CP118132.1 Protein Homology CDS 2297720 2299408 . - 0 ID=cds-WJG94965.1;Parent=gene-PUW35_11380;Dbxref=NCBI_GP:WJG94965.1;Name=WJG94965.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=PUW35_11380;product=PTS fructose transporter subunit IIBC;protein_id=WJG94965.1;transl_table=11 CP118132.1 Genbank gene 2299425 2300363 . - . ID=gene-PUW35_11385;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=PUW35_11385 CP118132.1 Protein Homology CDS 2299425 2300363 . - 0 ID=cds-WJG94966.1;Parent=gene-PUW35_11385;Dbxref=NCBI_GP:WJG94966.1;Name=WJG94966.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=PUW35_11385;product=1-phosphofructokinase;protein_id=WJG94966.1;transl_table=11 CP118132.1 Genbank pseudogene 2300363 2301492 . - . ID=gene-PUW35_11390;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=pseudogene;locus_tag=PUW35_11390;pseudo=true CP118132.1 Protein Homology CDS 2300363 2301492 . - 0 ID=cds-PUW35_11390;Parent=gene-PUW35_11390;Note=frameshifted;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=PUW35_11390;product=fused PTS fructose transporter subunit IIA/HPr protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2301861 2303042 . + . ID=gene-PUW35_11395;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=PUW35_11395 CP118132.1 Protein Homology CDS 2301861 2303042 . + 0 ID=cds-WJG94967.1;Parent=gene-PUW35_11395;Dbxref=NCBI_GP:WJG94967.1;Name=WJG94967.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=PUW35_11395;product=sugar efflux transporter SetB;protein_id=WJG94967.1;transl_table=11 CP118132.1 Genbank gene 2303106 2303771 . - . ID=gene-PUW35_11400;Name=PUW35_11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11400 CP118132.1 Protein Homology CDS 2303106 2303771 . - 0 ID=cds-WJG94968.1;Parent=gene-PUW35_11400;Dbxref=NCBI_GP:WJG94968.1;Name=WJG94968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=PUW35_11400;product=GNVR domain-containing protein;protein_id=WJG94968.1;transl_table=11 CP118132.1 Genbank gene 2303773 2303895 . - . ID=gene-PUW35_11405;Name=PUW35_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11405 CP118132.1 Protein Homology CDS 2303773 2303895 . - 0 ID=cds-WJG94969.1;Parent=gene-PUW35_11405;Dbxref=NCBI_GP:WJG94969.1;Name=WJG94969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=PUW35_11405;product=hypothetical protein;protein_id=WJG94969.1;transl_table=11 CP118132.1 Genbank pseudogene 2304283 2304538 . - . ID=gene-PUW35_11410;Name=PUW35_11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11410;pseudo=true CP118132.1 Protein Homology CDS 2304283 2304538 . - 0 ID=cds-PUW35_11410;Parent=gene-PUW35_11410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=PUW35_11410;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2304863 2305435 . + . ID=gene-PUW35_11415;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=PUW35_11415 CP118132.1 Protein Homology CDS 2304863 2305435 . + 0 ID=cds-WJG94970.1;Parent=gene-PUW35_11415;Dbxref=NCBI_GP:WJG94970.1;Name=WJG94970.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=PUW35_11415;product=elongation factor P-like protein YeiP;protein_id=WJG94970.1;transl_table=11 CP118132.1 Genbank gene 2305648 2306634 . + . ID=gene-PUW35_11420;Name=PUW35_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11420 CP118132.1 Protein Homology CDS 2305648 2306634 . + 0 ID=cds-WJG94971.1;Parent=gene-PUW35_11420;Dbxref=NCBI_GP:WJG94971.1;Name=WJG94971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=PUW35_11420;product=GTP-binding protein;protein_id=WJG94971.1;transl_table=11 CP118132.1 Genbank gene 2306664 2307383 . + . ID=gene-PUW35_11425;Name=PUW35_11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11425 CP118132.1 Protein Homology CDS 2306664 2307383 . + 0 ID=cds-WJG94972.1;Parent=gene-PUW35_11425;Dbxref=NCBI_GP:WJG94972.1;Name=WJG94972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=PUW35_11425;product=phosphatase PAP2 family protein;protein_id=WJG94972.1;transl_table=11 CP118132.1 Genbank gene 2307797 2308369 . + . ID=gene-PUW35_11430;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=PUW35_11430 CP118132.1 Protein Homology CDS 2307797 2308369 . + 0 ID=cds-WJG94973.1;Parent=gene-PUW35_11430;Dbxref=NCBI_GP:WJG94973.1;Name=WJG94973.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=PUW35_11430;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WJG94973.1;transl_table=11 CP118132.1 Genbank pseudogene 2308695 2310251 . + . ID=gene-PUW35_11435;Name=PUW35_11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11435;pseudo=true CP118132.1 Protein Homology CDS 2308695 2310251 . + 0 ID=cds-PUW35_11435;Parent=gene-PUW35_11435;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=PUW35_11435;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2310358 2312163 . + . ID=gene-PUW35_11440;Name=PUW35_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11440 CP118132.1 Protein Homology CDS 2310358 2312163 . + 0 ID=cds-WJG94974.1;Parent=gene-PUW35_11440;Dbxref=NCBI_GP:WJG94974.1;Name=WJG94974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=PUW35_11440;product=extracellular solute-binding protein;protein_id=WJG94974.1;transl_table=11 CP118132.1 Genbank gene 2312173 2313267 . + . ID=gene-PUW35_11445;Name=PUW35_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11445 CP118132.1 Protein Homology CDS 2312173 2313267 . + 0 ID=cds-WJG94975.1;Parent=gene-PUW35_11445;Dbxref=NCBI_GP:WJG94975.1;Name=WJG94975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=PUW35_11445;product=microcin C ABC transporter permease YejB;protein_id=WJG94975.1;transl_table=11 CP118132.1 Genbank gene 2313267 2314292 . + . ID=gene-PUW35_11450;Name=PUW35_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11450 CP118132.1 Protein Homology CDS 2313267 2314292 . + 0 ID=cds-WJG94976.1;Parent=gene-PUW35_11450;Dbxref=NCBI_GP:WJG94976.1;Name=WJG94976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=PUW35_11450;product=ABC transporter permease;protein_id=WJG94976.1;transl_table=11 CP118132.1 Genbank gene 2314294 2315883 . + . ID=gene-PUW35_11455;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=PUW35_11455 CP118132.1 Protein Homology CDS 2314294 2315883 . + 0 ID=cds-WJG94977.1;Parent=gene-PUW35_11455;Dbxref=NCBI_GP:WJG94977.1;Name=WJG94977.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=PUW35_11455;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WJG94977.1;transl_table=11 CP118132.1 Genbank gene 2315887 2316231 . - . ID=gene-PUW35_11460;Name=PUW35_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11460 CP118132.1 Protein Homology CDS 2315887 2316231 . - 0 ID=cds-WJG94978.1;Parent=gene-PUW35_11460;Dbxref=NCBI_GP:WJG94978.1;Name=WJG94978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=PUW35_11460;product=YejG family protein;protein_id=WJG94978.1;transl_table=11 CP118132.1 Genbank gene 2316622 2317812 . - . ID=gene-PUW35_11465;Name=PUW35_11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11465 CP118132.1 Protein Homology CDS 2316622 2317812 . - 0 ID=cds-WJG94979.1;Parent=gene-PUW35_11465;Dbxref=NCBI_GP:WJG94979.1;Name=WJG94979.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=PUW35_11465;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WJG94979.1;transl_table=11 CP118132.1 Genbank gene 2317840 2318535 . - . ID=gene-PUW35_11470;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=PUW35_11470 CP118132.1 Protein Homology CDS 2317840 2318535 . - 0 ID=cds-WJG94980.1;Parent=gene-PUW35_11470;Dbxref=NCBI_GP:WJG94980.1;Name=WJG94980.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=PUW35_11470;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WJG94980.1;transl_table=11 CP118132.1 Genbank gene 2318687 2320447 . + . ID=gene-PUW35_11475;Name=PUW35_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11475 CP118132.1 Protein Homology CDS 2318687 2320447 . + 0 ID=cds-WJG94981.1;Parent=gene-PUW35_11475;Dbxref=NCBI_GP:WJG94981.1;Name=WJG94981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=PUW35_11475;product=DEAD/DEAH box helicase;protein_id=WJG94981.1;transl_table=11 CP118132.1 Genbank gene 2320572 2320856 . + . ID=gene-PUW35_11480;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=PUW35_11480 CP118132.1 Protein Homology CDS 2320572 2320856 . + 0 ID=cds-WJG94982.1;Parent=gene-PUW35_11480;Dbxref=NCBI_GP:WJG94982.1;Name=WJG94982.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=PUW35_11480;product=50S ribosomal protein L25;protein_id=WJG94982.1;transl_table=11 CP118132.1 Genbank gene 2320964 2321584 . - . ID=gene-PUW35_11485;Name=PUW35_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11485 CP118132.1 Protein Homology CDS 2320964 2321584 . - 0 ID=cds-WJG94983.1;Parent=gene-PUW35_11485;Dbxref=NCBI_GP:WJG94983.1;Name=WJG94983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=PUW35_11485;product=hypothetical protein;protein_id=WJG94983.1;transl_table=11 CP118132.1 Genbank gene 2321612 2322619 . - . ID=gene-PUW35_11490;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=PUW35_11490 CP118132.1 Protein Homology CDS 2321612 2322619 . - 0 ID=cds-WJG94984.1;Parent=gene-PUW35_11490;Dbxref=NCBI_GP:WJG94984.1;Name=WJG94984.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=PUW35_11490;product=nucleoid-associated protein YejK;protein_id=WJG94984.1;transl_table=11 CP118132.1 Genbank gene 2322799 2323026 . + . ID=gene-PUW35_11495;Name=PUW35_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11495 CP118132.1 Protein Homology CDS 2322799 2323026 . + 0 ID=cds-WJG94985.1;Parent=gene-PUW35_11495;Dbxref=NCBI_GP:WJG94985.1;Name=WJG94985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=PUW35_11495;product=YejL family protein;protein_id=WJG94985.1;transl_table=11 CP118132.1 Genbank gene 2323058 2324818 . + . ID=gene-PUW35_11500;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=PUW35_11500 CP118132.1 Protein Homology CDS 2323058 2324818 . + 0 ID=cds-WJG94986.1;Parent=gene-PUW35_11500;Dbxref=NCBI_GP:WJG94986.1;Name=WJG94986.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=PUW35_11500;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WJG94986.1;transl_table=11 CP118132.1 Genbank gene 2324892 2324968 . + . ID=gene-PUW35_11505;Name=PUW35_11505;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_11505 CP118132.1 tRNAscan-SE tRNA 2324892 2324968 . + . ID=rna-PUW35_11505;Parent=gene-PUW35_11505;anticodon=(pos:2324926..2324928);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_11505;product=tRNA-Pro CP118132.1 tRNAscan-SE exon 2324892 2324968 . + . ID=exon-PUW35_11505-1;Parent=rna-PUW35_11505;anticodon=(pos:2324926..2324928);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_11505;product=tRNA-Pro CP118132.1 Genbank pseudogene 2324924 2325022 . + . ID=gene-PUW35_11510;Name=PUW35_11510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11510;pseudo=true CP118132.1 Protein Homology CDS 2324924 2325022 . + 0 ID=cds-PUW35_11510;Parent=gene-PUW35_11510;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=PUW35_11510;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2325279 2325576 . - . ID=gene-PUW35_11515;Name=PUW35_11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11515;pseudo=true CP118132.1 Protein Homology CDS 2325279 2325576 . - 0 ID=cds-PUW35_11515;Parent=gene-PUW35_11515;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457662.1;locus_tag=PUW35_11515;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2325589 2326401 . - . ID=gene-PUW35_11520;Name=PUW35_11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11520 CP118132.1 Protein Homology CDS 2325589 2326401 . - 0 ID=cds-WJG94987.1;Parent=gene-PUW35_11520;Dbxref=NCBI_GP:WJG94987.1;Name=WJG94987.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: protein motif:HMM:NF025849.2;locus_tag=PUW35_11520;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WJG94987.1;transl_table=11 CP118132.1 Genbank gene 2326382 2327374 . - . ID=gene-PUW35_11525;Name=PUW35_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11525 CP118132.1 GeneMarkS-2+ CDS 2326382 2327374 . - 0 ID=cds-WJG94988.1;Parent=gene-PUW35_11525;Dbxref=NCBI_GP:WJG94988.1;Name=WJG94988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_11525;product=hypothetical protein;protein_id=WJG94988.1;transl_table=11 CP118132.1 Genbank pseudogene 2327591 2327956 . - . ID=gene-PUW35_11530;Name=PUW35_11530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11530;pseudo=true CP118132.1 Protein Homology CDS 2327591 2327956 . - 0 ID=cds-PUW35_11530;Parent=gene-PUW35_11530;Note=secreted by salmonella pathogenicity island 2%3B involved in survival of Salmonella in host cells%3B interferes with host cell ubiquination pathway%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460026.1;locus_tag=PUW35_11530;product=E3 ubiquitin--protein ligase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2328125 2328327 . - . ID=gene-PUW35_11535;Name=PUW35_11535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11535;pseudo=true CP118132.1 Protein Homology CDS 2328125 2328327 . - 0 ID=cds-PUW35_11535;Parent=gene-PUW35_11535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461185.1;locus_tag=PUW35_11535;product=phage tail protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2328623 2329414 . - . ID=gene-PUW35_11540;Name=PUW35_11540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11540;pseudo=true CP118132.1 Protein Homology CDS 2328623 2329414 . - 0 ID=cds-PUW35_11540;Parent=gene-PUW35_11540;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461186.1;locus_tag=PUW35_11540;product=tail fiber protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2329530 2329688 . + . ID=gene-PUW35_11545;Name=PUW35_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11545 CP118132.1 GeneMarkS-2+ CDS 2329530 2329688 . + 0 ID=cds-WJG91404.1;Parent=gene-PUW35_11545;Dbxref=NCBI_GP:WJG91404.1;Name=WJG91404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_11545;product=hypothetical protein;protein_id=WJG91404.1;transl_table=11 CP118132.1 Genbank gene 2329717 2329920 . + . ID=gene-PUW35_11550;Name=PUW35_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11550 CP118132.1 Protein Homology CDS 2329717 2329920 . + 0 ID=cds-WJG95086.1;Parent=gene-PUW35_11550;Dbxref=NCBI_GP:WJG95086.1;Name=WJG95086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=PUW35_11550;product=DinI-like family protein;protein_id=WJG95086.1;transl_table=11 CP118132.1 Genbank gene 2330112 2330675 . - . ID=gene-PUW35_11555;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=PUW35_11555 CP118132.1 Protein Homology CDS 2330112 2330675 . - 0 ID=cds-WJG91405.1;Parent=gene-PUW35_11555;Dbxref=NCBI_GP:WJG91405.1;Name=WJG91405.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=PUW35_11555;product=lipid A 3-O-deacylase PagL;protein_id=WJG91405.1;transl_table=11 CP118132.1 Genbank gene 2331405 2332052 . + . ID=gene-PUW35_11560;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=PUW35_11560 CP118132.1 Protein Homology CDS 2331405 2332052 . + 0 ID=cds-WJG95087.1;Parent=gene-PUW35_11560;Dbxref=NCBI_GP:WJG95087.1;Name=WJG95087.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=PUW35_11560;product=nitrate/nitrite response regulator protein NarP;protein_id=WJG95087.1;transl_table=11 CP118132.1 Genbank pseudogene 2332096 2333147 . - . ID=gene-PUW35_11565;Name=PUW35_11565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11565;pseudo=true CP118132.1 Protein Homology CDS 2332096 2333147 . - 0 ID=cds-PUW35_11565;Parent=gene-PUW35_11565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=PUW35_11565;product=cytochrome c-type biogenesis protein CcmH;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2333144 2333701 . - . ID=gene-PUW35_11570;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PUW35_11570 CP118132.1 Protein Homology CDS 2333144 2333701 . - 0 ID=cds-WJG91406.1;Parent=gene-PUW35_11570;Dbxref=NCBI_GP:WJG91406.1;Name=WJG91406.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=PUW35_11570;product=thiol:disulfide interchange protein DsbE;protein_id=WJG91406.1;transl_table=11 CP118132.1 Genbank gene 2333698 2335629 . - . ID=gene-PUW35_11575;Name=PUW35_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11575 CP118132.1 Protein Homology CDS 2333698 2335629 . - 0 ID=cds-WJG91407.1;Parent=gene-PUW35_11575;Dbxref=NCBI_GP:WJG91407.1;Name=WJG91407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=PUW35_11575;product=heme lyase CcmF/NrfE family subunit;protein_id=WJG91407.1;transl_table=11 CP118132.1 Genbank gene 2335626 2336105 . - . ID=gene-PUW35_11580;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PUW35_11580 CP118132.1 Protein Homology CDS 2335626 2336105 . - 0 ID=cds-WJG91408.1;Parent=gene-PUW35_11580;Dbxref=NCBI_GP:WJG91408.1;Name=WJG91408.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=PUW35_11580;product=cytochrome c maturation protein CcmE;protein_id=WJG91408.1;transl_table=11 CP118132.1 Genbank gene 2336102 2336314 . - . ID=gene-PUW35_11585;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PUW35_11585 CP118132.1 Protein Homology CDS 2336102 2336314 . - 0 ID=cds-WJG91409.1;Parent=gene-PUW35_11585;Dbxref=NCBI_GP:WJG91409.1;Name=WJG91409.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=PUW35_11585;product=heme exporter protein CcmD;protein_id=WJG91409.1;transl_table=11 CP118132.1 Genbank gene 2336311 2337048 . - . ID=gene-PUW35_11590;Name=PUW35_11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11590 CP118132.1 Protein Homology CDS 2336311 2337048 . - 0 ID=cds-WJG91410.1;Parent=gene-PUW35_11590;Dbxref=NCBI_GP:WJG91410.1;Name=WJG91410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=PUW35_11590;product=heme ABC transporter permease;protein_id=WJG91410.1;transl_table=11 CP118132.1 Genbank gene 2337100 2337759 . - . ID=gene-PUW35_11595;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PUW35_11595 CP118132.1 Protein Homology CDS 2337100 2337759 . - 0 ID=cds-WJG91411.1;Parent=gene-PUW35_11595;Dbxref=NCBI_GP:WJG91411.1;Name=WJG91411.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=PUW35_11595;product=heme exporter protein CcmB;protein_id=WJG91411.1;transl_table=11 CP118132.1 Genbank gene 2337756 2338373 . - . ID=gene-PUW35_11600;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PUW35_11600 CP118132.1 Protein Homology CDS 2337756 2338373 . - 0 ID=cds-WJG91412.1;Parent=gene-PUW35_11600;Dbxref=NCBI_GP:WJG91412.1;Name=WJG91412.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=PUW35_11600;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WJG91412.1;transl_table=11 CP118132.1 Genbank gene 2338394 2338996 . - . ID=gene-PUW35_11605;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=PUW35_11605 CP118132.1 Protein Homology CDS 2338394 2338996 . - 0 ID=cds-WJG91413.1;Parent=gene-PUW35_11605;Dbxref=NCBI_GP:WJG91413.1;Name=WJG91413.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=PUW35_11605;product=cytochrome c-type protein NapC;protein_id=WJG91413.1;transl_table=11 CP118132.1 Genbank gene 2339006 2339455 . - . ID=gene-PUW35_11610;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=PUW35_11610 CP118132.1 Protein Homology CDS 2339006 2339455 . - 0 ID=cds-WJG91414.1;Parent=gene-PUW35_11610;Dbxref=NCBI_GP:WJG91414.1;Name=WJG91414.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=PUW35_11610;product=nitrate reductase cytochrome c-type subunit;protein_id=WJG91414.1;transl_table=11 CP118132.1 Genbank gene 2339571 2340440 . - . ID=gene-PUW35_11615;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=PUW35_11615 CP118132.1 Protein Homology CDS 2339571 2340440 . - 0 ID=cds-WJG91415.1;Parent=gene-PUW35_11615;Dbxref=NCBI_GP:WJG91415.1;Name=WJG91415.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=PUW35_11615;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WJG91415.1;transl_table=11 CP118132.1 Genbank gene 2340427 2341122 . - . ID=gene-PUW35_11620;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=PUW35_11620 CP118132.1 Protein Homology CDS 2340427 2341122 . - 0 ID=cds-WJG91416.1;Parent=gene-PUW35_11620;Dbxref=NCBI_GP:WJG91416.1;Name=WJG91416.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=PUW35_11620;product=ferredoxin-type protein NapG;protein_id=WJG91416.1;transl_table=11 CP118132.1 Genbank gene 2341129 2343615 . - . ID=gene-PUW35_11625;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=PUW35_11625 CP118132.1 Protein Homology CDS 2341129 2343615 . - 0 ID=cds-WJG91417.1;Parent=gene-PUW35_11625;Dbxref=NCBI_GP:WJG91417.1;Name=WJG91417.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=PUW35_11625;product=nitrate reductase catalytic subunit NapA;protein_id=WJG91417.1;transl_table=11 CP118132.1 Genbank gene 2343612 2343875 . - . ID=gene-PUW35_11630;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=PUW35_11630 CP118132.1 Protein Homology CDS 2343612 2343875 . - 0 ID=cds-WJG91418.1;Parent=gene-PUW35_11630;Dbxref=NCBI_GP:WJG91418.1;Name=WJG91418.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=PUW35_11630;product=chaperone NapD;protein_id=WJG91418.1;transl_table=11 CP118132.1 Genbank gene 2343865 2344356 . - . ID=gene-PUW35_11635;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=PUW35_11635 CP118132.1 Protein Homology CDS 2343865 2344356 . - 0 ID=cds-WJG91419.1;Parent=gene-PUW35_11635;Dbxref=NCBI_GP:WJG91419.1;Name=WJG91419.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=PUW35_11635;product=ferredoxin-type protein NapF;protein_id=WJG91419.1;transl_table=11 CP118132.1 Genbank gene 2344770 2345264 . + . ID=gene-PUW35_11640;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=PUW35_11640 CP118132.1 Protein Homology CDS 2344770 2345264 . + 0 ID=cds-WJG95088.1;Parent=gene-PUW35_11640;Dbxref=NCBI_GP:WJG95088.1;Name=WJG95088.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=PUW35_11640;product=serine protease inhibitor ecotin;protein_id=WJG95088.1;transl_table=11 CP118132.1 Genbank gene 2345447 2347090 . - . ID=gene-PUW35_11645;Name=PUW35_11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11645 CP118132.1 Protein Homology CDS 2345447 2347090 . - 0 ID=cds-WJG91420.1;Parent=gene-PUW35_11645;Dbxref=NCBI_GP:WJG91420.1;Name=WJG91420.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=PUW35_11645;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WJG91420.1;transl_table=11 CP118132.1 Genbank gene 2347164 2347814 . - . ID=gene-PUW35_11650;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=PUW35_11650 CP118132.1 Protein Homology CDS 2347164 2347814 . - 0 ID=cds-WJG91421.1;Parent=gene-PUW35_11650;Dbxref=NCBI_GP:WJG91421.1;Name=WJG91421.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=PUW35_11650;product=DNA oxidative demethylase AlkB;protein_id=WJG91421.1;transl_table=11 CP118132.1 Genbank gene 2347817 2348878 . - . ID=gene-PUW35_11655;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=PUW35_11655 CP118132.1 Protein Homology CDS 2347817 2348878 . - 0 ID=cds-WJG91422.1;Parent=gene-PUW35_11655;Dbxref=NCBI_GP:WJG91422.1;Name=WJG91422.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=PUW35_11655;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WJG91422.1;transl_table=11 CP118132.1 Genbank pseudogene 2348959 2350009 . - . ID=gene-PUW35_11660;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=pseudogene;locus_tag=PUW35_11660;pseudo=true CP118132.1 Protein Homology CDS 2348959 2350009 . - 0 ID=cds-PUW35_11660;Parent=gene-PUW35_11660;Note=frameshifted;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=PUW35_11660;product=FAD:protein FMN transferase ApbE;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2350124 2351260 . - . ID=gene-PUW35_11665;Name=PUW35_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11665 CP118132.1 Protein Homology CDS 2350124 2351260 . - 0 ID=cds-WJG91423.1;Parent=gene-PUW35_11665;Dbxref=NCBI_GP:WJG91423.1;Name=WJG91423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=PUW35_11665;product=porin OmpC;protein_id=WJG91423.1;transl_table=11 CP118132.1 Genbank gene 2351987 2354656 . + . ID=gene-PUW35_11670;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=PUW35_11670 CP118132.1 Protein Homology CDS 2351987 2354656 . + 0 ID=cds-WJG91424.1;Parent=gene-PUW35_11670;Dbxref=NCBI_GP:WJG91424.1;Name=WJG91424.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=PUW35_11670;product=phosphotransferase RcsD;protein_id=WJG91424.1;transl_table=11 CP118132.1 Genbank gene 2354673 2355323 . + . ID=gene-PUW35_11675;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=PUW35_11675 CP118132.1 Protein Homology CDS 2354673 2355323 . + 0 ID=cds-WJG91425.1;Parent=gene-PUW35_11675;Dbxref=NCBI_GP:WJG91425.1;Name=WJG91425.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=PUW35_11675;product=response regulator transcription factor RcsB;protein_id=WJG91425.1;transl_table=11 CP118132.1 Genbank gene 2355426 2358272 . - . ID=gene-PUW35_11680;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=PUW35_11680 CP118132.1 Protein Homology CDS 2355426 2358272 . - 0 ID=cds-WJG91426.1;Parent=gene-PUW35_11680;Dbxref=NCBI_GP:WJG91426.1;Name=WJG91426.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=PUW35_11680;product=two-component system sensor histidine kinase RcsC;protein_id=WJG91426.1;transl_table=11 CP118132.1 Genbank gene 2358390 2361026 . - . ID=gene-PUW35_11685;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=PUW35_11685 CP118132.1 Protein Homology CDS 2358390 2361026 . - 0 ID=cds-WJG91427.1;Parent=gene-PUW35_11685;Dbxref=NCBI_GP:WJG91427.1;Name=WJG91427.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=PUW35_11685;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WJG91427.1;transl_table=11 CP118132.1 Genbank gene 2361435 2362637 . - . ID=gene-PUW35_11690;Name=PUW35_11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11690 CP118132.1 Protein Homology CDS 2361435 2362637 . - 0 ID=cds-WJG91428.1;Parent=gene-PUW35_11690;Dbxref=NCBI_GP:WJG91428.1;Name=WJG91428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=PUW35_11690;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WJG91428.1;transl_table=11 CP118132.1 Genbank pseudogene 2362652 2363976 . - . ID=gene-PUW35_11695;Name=PUW35_11695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_11695;pseudo=true CP118132.1 Protein Homology CDS 2362652 2363976 . - 0 ID=cds-PUW35_11695;Parent=gene-PUW35_11695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=PUW35_11695;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2364026 2364910 . + . ID=gene-PUW35_11700;Name=PUW35_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11700 CP118132.1 Protein Homology CDS 2364026 2364910 . + 0 ID=cds-WJG91429.1;Parent=gene-PUW35_11700;Dbxref=NCBI_GP:WJG91429.1;Name=WJG91429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=PUW35_11700;product=GntR family transcriptional regulator;protein_id=WJG91429.1;transl_table=11 CP118132.1 Genbank gene 2364993 2365721 . + . ID=gene-PUW35_11705;Name=PUW35_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11705 CP118132.1 Protein Homology CDS 2364993 2365721 . + 0 ID=cds-WJG91430.1;Parent=gene-PUW35_11705;Dbxref=NCBI_GP:WJG91430.1;Name=WJG91430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=PUW35_11705;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WJG91430.1;transl_table=11 CP118132.1 Genbank gene 2366076 2368361 . + . ID=gene-PUW35_11710;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=PUW35_11710 CP118132.1 Protein Homology CDS 2366076 2368361 . + 0 ID=cds-WJG91431.1;Parent=gene-PUW35_11710;Dbxref=NCBI_GP:WJG91431.1;Name=WJG91431.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=PUW35_11710;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WJG91431.1;transl_table=11 CP118132.1 Genbank gene 2368474 2369604 . + . ID=gene-PUW35_11715;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=PUW35_11715 CP118132.1 Protein Homology CDS 2368474 2369604 . + 0 ID=cds-WJG91432.1;Parent=gene-PUW35_11715;Dbxref=NCBI_GP:WJG91432.1;Name=WJG91432.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=PUW35_11715;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WJG91432.1;transl_table=11 CP118132.1 Genbank gene 2369604 2369858 . + . ID=gene-PUW35_11720;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=PUW35_11720 CP118132.1 Protein Homology CDS 2369604 2369858 . + 0 ID=cds-WJG91433.1;Parent=gene-PUW35_11720;Dbxref=NCBI_GP:WJG91433.1;Name=WJG91433.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=PUW35_11720;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WJG91433.1;transl_table=11 CP118132.1 Genbank gene 2369860 2371050 . - . ID=gene-PUW35_11725;Name=PUW35_11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11725 CP118132.1 Protein Homology CDS 2369860 2371050 . - 0 ID=cds-WJG91434.1;Parent=gene-PUW35_11725;Dbxref=NCBI_GP:WJG91434.1;Name=WJG91434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=PUW35_11725;product=MFS transporter;protein_id=WJG91434.1;transl_table=11 CP118132.1 Genbank gene 2371212 2372090 . + . ID=gene-PUW35_11730;Name=PUW35_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11730 CP118132.1 Protein Homology CDS 2371212 2372090 . + 0 ID=cds-WJG91435.1;Parent=gene-PUW35_11730;Dbxref=NCBI_GP:WJG91435.1;Name=WJG91435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=PUW35_11730;product=LysR substrate-binding domain-containing protein;protein_id=WJG91435.1;transl_table=11 CP118132.1 Genbank gene 2372206 2373276 . - . ID=gene-PUW35_11735;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=PUW35_11735 CP118132.1 Protein Homology CDS 2372206 2373276 . - 0 ID=cds-WJG91436.1;Parent=gene-PUW35_11735;Dbxref=NCBI_GP:WJG91436.1;Name=WJG91436.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=PUW35_11735;product=glycerophosphodiester phosphodiesterase;protein_id=WJG91436.1;transl_table=11 CP118132.1 Genbank gene 2373281 2374639 . - . ID=gene-PUW35_11740;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=PUW35_11740 CP118132.1 Protein Homology CDS 2373281 2374639 . - 0 ID=cds-WJG91437.1;Parent=gene-PUW35_11740;Dbxref=NCBI_GP:WJG91437.1;Name=WJG91437.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=PUW35_11740;product=glycerol-3-phosphate transporter;protein_id=WJG91437.1;transl_table=11 CP118132.1 Genbank gene 2374912 2376540 . + . ID=gene-PUW35_11745;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=PUW35_11745 CP118132.1 Protein Homology CDS 2374912 2376540 . + 0 ID=cds-WJG91438.1;Parent=gene-PUW35_11745;Dbxref=NCBI_GP:WJG91438.1;Name=WJG91438.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=PUW35_11745;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WJG91438.1;transl_table=11 CP118132.1 Genbank gene 2376530 2377789 . + . ID=gene-PUW35_11750;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=PUW35_11750 CP118132.1 Protein Homology CDS 2376530 2377789 . + 0 ID=cds-WJG91439.1;Parent=gene-PUW35_11750;Dbxref=NCBI_GP:WJG91439.1;Name=WJG91439.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=PUW35_11750;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WJG91439.1;transl_table=11 CP118132.1 Genbank gene 2377786 2378976 . + . ID=gene-PUW35_11755;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=PUW35_11755 CP118132.1 Protein Homology CDS 2377786 2378976 . + 0 ID=cds-WJG91440.1;Parent=gene-PUW35_11755;Dbxref=NCBI_GP:WJG91440.1;Name=WJG91440.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=PUW35_11755;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WJG91440.1;transl_table=11 CP118132.1 Genbank gene 2379402 2380424 . + . ID=gene-PUW35_11760;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=PUW35_11760 CP118132.1 Protein Homology CDS 2379402 2380424 . + 0 ID=cds-WJG91441.1;Parent=gene-PUW35_11760;Dbxref=NCBI_GP:WJG91441.1;Name=WJG91441.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=PUW35_11760;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WJG91441.1;transl_table=11 CP118132.1 Genbank gene 2380511 2380687 . - . ID=gene-PUW35_11765;Name=PUW35_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11765 CP118132.1 Protein Homology CDS 2380511 2380687 . - 0 ID=cds-WJG91442.1;Parent=gene-PUW35_11765;Dbxref=NCBI_GP:WJG91442.1;Name=WJG91442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=PUW35_11765;product=molybdopterin-binding protein;protein_id=WJG91442.1;transl_table=11 CP118132.1 Genbank gene 2380693 2381496 . - . ID=gene-PUW35_11770;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=PUW35_11770 CP118132.1 Protein Homology CDS 2380693 2381496 . - 0 ID=cds-WJG91443.1;Parent=gene-PUW35_11770;Dbxref=NCBI_GP:WJG91443.1;Name=WJG91443.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=PUW35_11770;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WJG91443.1;transl_table=11 CP118132.1 Genbank gene 2381522 2382811 . - . ID=gene-PUW35_11775;Name=PUW35_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11775 CP118132.1 Protein Homology CDS 2381522 2382811 . - 0 ID=cds-WJG91444.1;Parent=gene-PUW35_11775;Dbxref=NCBI_GP:WJG91444.1;Name=WJG91444.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=PUW35_11775;product=MFS transporter;protein_id=WJG91444.1;transl_table=11 CP118132.1 Genbank gene 2382867 2384072 . - . ID=gene-PUW35_11780;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=PUW35_11780 CP118132.1 Protein Homology CDS 2382867 2384072 . - 0 ID=cds-WJG91445.1;Parent=gene-PUW35_11780;Dbxref=NCBI_GP:WJG91445.1;Name=WJG91445.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=PUW35_11780;product=L-rhamnonate dehydratase;protein_id=WJG91445.1;transl_table=11 CP118132.1 Genbank gene 2384086 2384868 . - . ID=gene-PUW35_11785;Name=PUW35_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11785 CP118132.1 Protein Homology CDS 2384086 2384868 . - 0 ID=cds-WJG91446.1;Parent=gene-PUW35_11785;Dbxref=NCBI_GP:WJG91446.1;Name=WJG91446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=PUW35_11785;product=IclR family transcriptional regulator;protein_id=WJG91446.1;transl_table=11 CP118132.1 Genbank gene 2385118 2386314 . - . ID=gene-PUW35_11790;Name=PUW35_11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11790 CP118132.1 Protein Homology CDS 2385118 2386314 . - 0 ID=cds-WJG91447.1;Parent=gene-PUW35_11790;Dbxref=NCBI_GP:WJG91447.1;Name=WJG91447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=PUW35_11790;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WJG91447.1;transl_table=11 CP118132.1 Genbank gene 2386429 2386938 . - . ID=gene-PUW35_11795;Name=PUW35_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11795 CP118132.1 Protein Homology CDS 2386429 2386938 . - 0 ID=cds-WJG91448.1;Parent=gene-PUW35_11795;Dbxref=NCBI_GP:WJG91448.1;Name=WJG91448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739003.1;locus_tag=PUW35_11795;product=YfaZ family outer membrane protein;protein_id=WJG91448.1;transl_table=11 CP118132.1 Genbank gene 2387251 2387676 . + . ID=gene-PUW35_11800;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=PUW35_11800 CP118132.1 Protein Homology CDS 2387251 2387676 . + 0 ID=cds-WJG91449.1;Parent=gene-PUW35_11800;Dbxref=NCBI_GP:WJG91449.1;Name=WJG91449.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=PUW35_11800;product=nucleoside triphosphatase NudI;protein_id=WJG91449.1;transl_table=11 CP118132.1 Genbank gene 2387721 2388326 . - . ID=gene-PUW35_11805;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=PUW35_11805 CP118132.1 Protein Homology CDS 2387721 2388326 . - 0 ID=cds-WJG91450.1;Parent=gene-PUW35_11805;Dbxref=NCBI_GP:WJG91450.1;Name=WJG91450.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=PUW35_11805;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WJG91450.1;transl_table=11 CP118132.1 Genbank gene 2388625 2389764 . + . ID=gene-PUW35_11810;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=PUW35_11810 CP118132.1 Protein Homology CDS 2388625 2389764 . + 0 ID=cds-WJG95089.1;Parent=gene-PUW35_11810;Dbxref=NCBI_GP:WJG95089.1;Name=WJG95089.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=PUW35_11810;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WJG95089.1;transl_table=11 CP118132.1 Genbank gene 2389767 2390750 . + . ID=gene-PUW35_11815;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=PUW35_11815 CP118132.1 Protein Homology CDS 2389767 2390750 . + 0 ID=cds-WJG91451.1;Parent=gene-PUW35_11815;Dbxref=NCBI_GP:WJG91451.1;Name=WJG91451.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=PUW35_11815;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WJG91451.1;transl_table=11 CP118132.1 Genbank gene 2390747 2392729 . + . ID=gene-PUW35_11820;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=PUW35_11820 CP118132.1 Protein Homology CDS 2390747 2392729 . + 0 ID=cds-WJG91452.1;Parent=gene-PUW35_11820;Dbxref=NCBI_GP:WJG91452.1;Name=WJG91452.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=PUW35_11820;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WJG91452.1;transl_table=11 CP118132.1 Genbank gene 2392726 2393625 . + . ID=gene-PUW35_11825;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=PUW35_11825 CP118132.1 Protein Homology CDS 2392726 2393625 . + 0 ID=cds-WJG91453.1;Parent=gene-PUW35_11825;Dbxref=NCBI_GP:WJG91453.1;Name=WJG91453.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=PUW35_11825;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WJG91453.1;transl_table=11 CP118132.1 Genbank gene 2393622 2395268 . + . ID=gene-PUW35_11830;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=PUW35_11830 CP118132.1 Protein Homology CDS 2393622 2395268 . + 0 ID=cds-WJG91454.1;Parent=gene-PUW35_11830;Dbxref=NCBI_GP:WJG91454.1;Name=WJG91454.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=PUW35_11830;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WJG91454.1;transl_table=11 CP118132.1 Genbank gene 2395265 2395600 . + . ID=gene-PUW35_11835;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=PUW35_11835 CP118132.1 Protein Homology CDS 2395265 2395600 . + 0 ID=cds-WJG91455.1;Parent=gene-PUW35_11835;Dbxref=NCBI_GP:WJG91455.1;Name=WJG91455.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=PUW35_11835;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WJG91455.1;transl_table=11 CP118132.1 Genbank gene 2395600 2395977 . + . ID=gene-PUW35_11840;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=PUW35_11840 CP118132.1 Protein Homology CDS 2395600 2395977 . + 0 ID=cds-WJG91456.1;Parent=gene-PUW35_11840;Dbxref=NCBI_GP:WJG91456.1;Name=WJG91456.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=PUW35_11840;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WJG91456.1;transl_table=11 CP118132.1 Genbank gene 2395972 2396229 . - . ID=gene-PUW35_11845;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=PUW35_11845 CP118132.1 Protein Homology CDS 2395972 2396229 . - 0 ID=cds-WJG91457.1;Parent=gene-PUW35_11845;Dbxref=NCBI_GP:WJG91457.1;Name=WJG91457.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=PUW35_11845;product=signal transduction protein PmrD;protein_id=WJG91457.1;transl_table=11 CP118132.1 Genbank gene 2396327 2397694 . - . ID=gene-PUW35_11850;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=PUW35_11850 CP118132.1 Protein Homology CDS 2396327 2397694 . - 0 ID=cds-WJG91458.1;Parent=gene-PUW35_11850;Dbxref=NCBI_GP:WJG91458.1;Name=WJG91458.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=PUW35_11850;product=o-succinylbenzoate--CoA ligase;protein_id=WJG91458.1;transl_table=11 CP118132.1 Genbank gene 2397691 2398653 . - . ID=gene-PUW35_11855;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=PUW35_11855 CP118132.1 Protein Homology CDS 2397691 2398653 . - 0 ID=cds-WJG91459.1;Parent=gene-PUW35_11855;Dbxref=NCBI_GP:WJG91459.1;Name=WJG91459.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=PUW35_11855;product=o-succinylbenzoate synthase;protein_id=WJG91459.1;transl_table=11 CP118132.1 Genbank gene 2398653 2399510 . - . ID=gene-PUW35_11860;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=PUW35_11860 CP118132.1 Protein Homology CDS 2398653 2399510 . - 0 ID=cds-WJG91460.1;Parent=gene-PUW35_11860;Dbxref=NCBI_GP:WJG91460.1;Name=WJG91460.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=PUW35_11860;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WJG91460.1;transl_table=11 CP118132.1 Genbank gene 2399525 2400283 . - . ID=gene-PUW35_11865;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=PUW35_11865 CP118132.1 Protein Homology CDS 2399525 2400283 . - 0 ID=cds-WJG91461.1;Parent=gene-PUW35_11865;Dbxref=NCBI_GP:WJG91461.1;Name=WJG91461.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=PUW35_11865;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WJG91461.1;transl_table=11 CP118132.1 Genbank pseudogene 2400280 2401949 . - . ID=gene-PUW35_11870;Name=menD;gbkey=Gene;gene=menD;gene_biotype=pseudogene;locus_tag=PUW35_11870;pseudo=true CP118132.1 Protein Homology CDS 2400280 2401949 . - 0 ID=cds-PUW35_11870;Parent=gene-PUW35_11870;Note=frameshifted;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=PUW35_11870;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2402035 2403330 . - . ID=gene-PUW35_11875;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=PUW35_11875 CP118132.1 Protein Homology CDS 2402035 2403330 . - 0 ID=cds-WJG91462.1;Parent=gene-PUW35_11875;Dbxref=NCBI_GP:WJG91462.1;Name=WJG91462.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=PUW35_11875;product=isochorismate synthase MenF;protein_id=WJG91462.1;transl_table=11 CP118132.1 Genbank gene 2403431 2403736 . - . ID=gene-PUW35_11880;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=PUW35_11880 CP118132.1 Protein Homology CDS 2403431 2403736 . - 0 ID=cds-WJG91463.1;Parent=gene-PUW35_11880;Dbxref=NCBI_GP:WJG91463.1;Name=WJG91463.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=PUW35_11880;product=stress response protein ElaB;protein_id=WJG91463.1;transl_table=11 CP118132.1 Genbank gene 2403791 2404252 . - . ID=gene-PUW35_11885;Name=PUW35_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11885 CP118132.1 Protein Homology CDS 2403791 2404252 . - 0 ID=cds-WJG91464.1;Parent=gene-PUW35_11885;Dbxref=NCBI_GP:WJG91464.1;Name=WJG91464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=PUW35_11885;product=GNAT family N-acetyltransferase;protein_id=WJG91464.1;transl_table=11 CP118132.1 Genbank gene 2404313 2405230 . + . ID=gene-PUW35_11890;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=PUW35_11890 CP118132.1 Protein Homology CDS 2404313 2405230 . + 0 ID=cds-WJG91465.1;Parent=gene-PUW35_11890;Dbxref=NCBI_GP:WJG91465.1;Name=WJG91465.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rbn;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=PUW35_11890;product=ribonuclease BN;protein_id=WJG91465.1;transl_table=11 CP118132.1 Genbank gene 2405296 2406297 . + . ID=gene-PUW35_11895;Name=PUW35_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11895 CP118132.1 Protein Homology CDS 2405296 2406297 . + 0 ID=cds-WJG91466.1;Parent=gene-PUW35_11895;Dbxref=NCBI_GP:WJG91466.1;Name=WJG91466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=PUW35_11895;product=chemotaxis protein;protein_id=WJG91466.1;transl_table=11 CP118132.1 Genbank gene 2406338 2408128 . - . ID=gene-PUW35_11900;Name=PUW35_11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11900 CP118132.1 Protein Homology CDS 2406338 2408128 . - 0 ID=cds-WJG91467.1;Parent=gene-PUW35_11900;Dbxref=NCBI_GP:WJG91467.1;Name=WJG91467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=PUW35_11900;product=VWA domain-containing protein;protein_id=WJG91467.1;transl_table=11 CP118132.1 Genbank gene 2408597 2408755 . + . ID=gene-PUW35_11905;Name=PUW35_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11905 CP118132.1 Protein Homology CDS 2408597 2408755 . + 0 ID=cds-WJG95090.1;Parent=gene-PUW35_11905;Dbxref=NCBI_GP:WJG95090.1;Name=WJG95090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020544.2;locus_tag=PUW35_11905;product=DUF1877 family protein;protein_id=WJG95090.1;transl_table=11 CP118132.1 Genbank pseudogene 2409017 2410473 . - . ID=gene-PUW35_11910;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=pseudogene;locus_tag=PUW35_11910;pseudo=true CP118132.1 Protein Homology CDS 2409017 2410473 . - 0 ID=cds-PUW35_11910;Parent=gene-PUW35_11910;Note=frameshifted;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=PUW35_11910;product=NADH-quinone oxidoreductase subunit NuoN;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2410480 2412009 . - . ID=gene-PUW35_11915;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=PUW35_11915 CP118132.1 Protein Homology CDS 2410480 2412009 . - 0 ID=cds-WJG91468.1;Parent=gene-PUW35_11915;Dbxref=NCBI_GP:WJG91468.1;Name=WJG91468.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=PUW35_11915;product=NADH-quinone oxidoreductase subunit M;protein_id=WJG91468.1;transl_table=11 CP118132.1 Genbank pseudogene 2412323 2414163 . - . ID=gene-PUW35_11920;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=pseudogene;locus_tag=PUW35_11920;pseudo=true CP118132.1 Protein Homology CDS 2412323 2414163 . - 0 ID=cds-PUW35_11920;Parent=gene-PUW35_11920;Note=frameshifted;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=PUW35_11920;product=NADH-quinone oxidoreductase subunit L;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2414160 2414462 . - . ID=gene-PUW35_11925;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=PUW35_11925 CP118132.1 Protein Homology CDS 2414160 2414462 . - 0 ID=cds-WJG91469.1;Parent=gene-PUW35_11925;Dbxref=NCBI_GP:WJG91469.1;Name=WJG91469.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=PUW35_11925;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WJG91469.1;transl_table=11 CP118132.1 Genbank gene 2414459 2415013 . - . ID=gene-PUW35_11930;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=PUW35_11930 CP118132.1 Protein Homology CDS 2414459 2415013 . - 0 ID=cds-WJG91470.1;Parent=gene-PUW35_11930;Dbxref=NCBI_GP:WJG91470.1;Name=WJG91470.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=PUW35_11930;product=NADH-quinone oxidoreductase subunit J;protein_id=WJG91470.1;transl_table=11 CP118132.1 Genbank gene 2415024 2415566 . - . ID=gene-PUW35_11935;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=PUW35_11935 CP118132.1 Protein Homology CDS 2415024 2415566 . - 0 ID=cds-WJG91471.1;Parent=gene-PUW35_11935;Dbxref=NCBI_GP:WJG91471.1;Name=WJG91471.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=PUW35_11935;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WJG91471.1;transl_table=11 CP118132.1 Genbank gene 2415581 2416558 . - . ID=gene-PUW35_11940;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=PUW35_11940 CP118132.1 Protein Homology CDS 2415581 2416558 . - 0 ID=cds-WJG91472.1;Parent=gene-PUW35_11940;Dbxref=NCBI_GP:WJG91472.1;Name=WJG91472.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=PUW35_11940;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WJG91472.1;transl_table=11 CP118132.1 Genbank gene 2416555 2419281 . - . ID=gene-PUW35_11945;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=PUW35_11945 CP118132.1 Protein Homology CDS 2416555 2419281 . - 0 ID=cds-WJG91473.1;Parent=gene-PUW35_11945;Dbxref=NCBI_GP:WJG91473.1;Name=WJG91473.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=PUW35_11945;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WJG91473.1;transl_table=11 CP118132.1 Genbank pseudogene 2419312 2420648 . - . ID=gene-PUW35_11950;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=pseudogene;locus_tag=PUW35_11950;pseudo=true CP118132.1 Protein Homology CDS 2419312 2420648 . - 0 ID=cds-PUW35_11950;Parent=gene-PUW35_11950;Note=frameshifted;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=PUW35_11950;product=NADH-quinone oxidoreductase subunit NuoF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2420645 2421145 . - . ID=gene-PUW35_11955;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=PUW35_11955 CP118132.1 Protein Homology CDS 2420645 2421145 . - 0 ID=cds-WJG91474.1;Parent=gene-PUW35_11955;Dbxref=NCBI_GP:WJG91474.1;Name=WJG91474.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=PUW35_11955;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WJG91474.1;transl_table=11 CP118132.1 Genbank gene 2421148 2422950 . - . ID=gene-PUW35_11960;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=PUW35_11960 CP118132.1 Protein Homology CDS 2421148 2422950 . - 0 ID=cds-WJG91475.1;Parent=gene-PUW35_11960;Dbxref=NCBI_GP:WJG91475.1;Name=WJG91475.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=PUW35_11960;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WJG91475.1;transl_table=11 CP118132.1 Genbank gene 2423037 2423699 . - . ID=gene-PUW35_11965;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=PUW35_11965 CP118132.1 Protein Homology CDS 2423037 2423699 . - 0 ID=cds-WJG91476.1;Parent=gene-PUW35_11965;Dbxref=NCBI_GP:WJG91476.1;Name=WJG91476.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=PUW35_11965;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WJG91476.1;transl_table=11 CP118132.1 Genbank gene 2423715 2424158 . - . ID=gene-PUW35_11970;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=PUW35_11970 CP118132.1 Protein Homology CDS 2423715 2424158 . - 0 ID=cds-WJG91477.1;Parent=gene-PUW35_11970;Dbxref=NCBI_GP:WJG91477.1;Name=WJG91477.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=PUW35_11970;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WJG91477.1;transl_table=11 CP118132.1 Genbank gene 2424552 2424704 . - . ID=gene-PUW35_11975;Name=PUW35_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11975 CP118132.1 Protein Homology CDS 2424552 2424704 . - 0 ID=cds-WJG91478.1;Parent=gene-PUW35_11975;Dbxref=NCBI_GP:WJG91478.1;Name=WJG91478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=PUW35_11975;product=hypothetical protein;protein_id=WJG91478.1;transl_table=11 CP118132.1 Genbank gene 2424784 2425722 . - . ID=gene-PUW35_11980;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=PUW35_11980 CP118132.1 Protein Homology CDS 2424784 2425722 . - 0 ID=cds-WJG91479.1;Parent=gene-PUW35_11980;Dbxref=NCBI_GP:WJG91479.1;Name=WJG91479.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=PUW35_11980;product=transcriptional regulator LrhA;protein_id=WJG91479.1;transl_table=11 CP118132.1 Genbank gene 2426654 2427868 . + . ID=gene-PUW35_11985;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=PUW35_11985 CP118132.1 Protein Homology CDS 2426654 2427868 . + 0 ID=cds-WJG91480.1;Parent=gene-PUW35_11985;Dbxref=NCBI_GP:WJG91480.1;Name=WJG91480.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=PUW35_11985;product=alanine transaminase AlaA;protein_id=WJG91480.1;transl_table=11 CP118132.1 Genbank gene 2427962 2428561 . + . ID=gene-PUW35_11990;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=PUW35_11990 CP118132.1 Protein Homology CDS 2427962 2428561 . + 0 ID=cds-WJG91481.1;Parent=gene-PUW35_11990;Dbxref=NCBI_GP:WJG91481.1;Name=WJG91481.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=PUW35_11990;product=5'-deoxynucleotidase;protein_id=WJG91481.1;transl_table=11 CP118132.1 Genbank gene 2428667 2430493 . - . ID=gene-PUW35_11995;Name=PUW35_11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_11995 CP118132.1 Protein Homology CDS 2428667 2430493 . - 0 ID=cds-WJG91482.1;Parent=gene-PUW35_11995;Dbxref=NCBI_GP:WJG91482.1;Name=WJG91482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=PUW35_11995;product=SLC13 family permease;protein_id=WJG91482.1;transl_table=11 CP118132.1 Genbank gene 2430570 2431247 . - . ID=gene-PUW35_12000;Name=PUW35_12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12000 CP118132.1 Protein Homology CDS 2430570 2431247 . - 0 ID=cds-WJG95091.1;Parent=gene-PUW35_12000;Dbxref=NCBI_GP:WJG95091.1;Name=WJG95091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=PUW35_12000;product=sugar phosphatase;protein_id=WJG95091.1;transl_table=11 CP118132.1 Genbank gene 2431240 2431734 . - . ID=gene-PUW35_12005;Name=PUW35_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12005 CP118132.1 Protein Homology CDS 2431240 2431734 . - 0 ID=cds-WJG91483.1;Parent=gene-PUW35_12005;Dbxref=NCBI_GP:WJG91483.1;Name=WJG91483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=PUW35_12005;product=YfbU family protein;protein_id=WJG91483.1;transl_table=11 CP118132.1 Genbank pseudogene 2431817 2432271 . - . ID=gene-PUW35_12010;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=pseudogene;locus_tag=PUW35_12010;pseudo=true CP118132.1 Protein Homology CDS 2431817 2432271 . - 0 ID=cds-PUW35_12010;Parent=gene-PUW35_12010;Note=frameshifted;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=PUW35_12010;product=terminus macrodomain insulation protein YfbV;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2432610 2433812 . + . ID=gene-PUW35_12015;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=PUW35_12015 CP118132.1 Protein Homology CDS 2432610 2433812 . + 0 ID=cds-WJG91484.1;Parent=gene-PUW35_12015;Dbxref=NCBI_GP:WJG91484.1;Name=WJG91484.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=PUW35_12015;product=acetate kinase;protein_id=WJG91484.1;transl_table=11 CP118132.1 Genbank gene 2433889 2436033 . + . ID=gene-PUW35_12020;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PUW35_12020 CP118132.1 Protein Homology CDS 2433889 2436033 . + 0 ID=cds-WJG91485.1;Parent=gene-PUW35_12020;Dbxref=NCBI_GP:WJG91485.1;Name=WJG91485.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=PUW35_12020;product=phosphate acetyltransferase;protein_id=WJG91485.1;transl_table=11 CP118132.1 Genbank gene 2436251 2437771 . + . ID=gene-PUW35_12025;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=PUW35_12025 CP118132.1 Protein Homology CDS 2436251 2437771 . + 0 ID=cds-WJG91486.1;Parent=gene-PUW35_12025;Dbxref=NCBI_GP:WJG91486.1;Name=WJG91486.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=PUW35_12025;product=putative basic amino acid antiporter YfcC;protein_id=WJG91486.1;transl_table=11 CP118132.1 Genbank gene 2437820 2438773 . - . ID=gene-PUW35_12030;Name=PUW35_12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12030 CP118132.1 Protein Homology CDS 2437820 2438773 . - 0 ID=cds-WJG91487.1;Parent=gene-PUW35_12030;Dbxref=NCBI_GP:WJG91487.1;Name=WJG91487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=PUW35_12030;product=transketolase family protein;protein_id=WJG91487.1;transl_table=11 CP118132.1 Genbank pseudogene 2438766 2439595 . - . ID=gene-PUW35_12035;Name=PUW35_12035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12035;pseudo=true CP118132.1 Protein Homology CDS 2438766 2439595 . - 0 ID=cds-PUW35_12035;Parent=gene-PUW35_12035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=PUW35_12035;product=transketolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2439592 2440983 . - . ID=gene-PUW35_12040;Name=PUW35_12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12040 CP118132.1 Protein Homology CDS 2439592 2440983 . - 0 ID=cds-WJG91488.1;Parent=gene-PUW35_12040;Dbxref=NCBI_GP:WJG91488.1;Name=WJG91488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=PUW35_12040;product=PTS ascorbate transporter subunit IIC;protein_id=WJG91488.1;transl_table=11 CP118132.1 Genbank gene 2441004 2441276 . - . ID=gene-PUW35_12045;Name=PUW35_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12045 CP118132.1 Protein Homology CDS 2441004 2441276 . - 0 ID=cds-WJG91489.1;Parent=gene-PUW35_12045;Dbxref=NCBI_GP:WJG91489.1;Name=WJG91489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=PUW35_12045;product=PTS sugar transporter subunit IIB;protein_id=WJG91489.1;transl_table=11 CP118132.1 Genbank gene 2441357 2441800 . - . ID=gene-PUW35_12050;Name=PUW35_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12050 CP118132.1 Protein Homology CDS 2441357 2441800 . - 0 ID=cds-WJG91490.1;Parent=gene-PUW35_12050;Dbxref=NCBI_GP:WJG91490.1;Name=WJG91490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=PUW35_12050;product=PTS sugar transporter subunit IIA;protein_id=WJG91490.1;transl_table=11 CP118132.1 Genbank gene 2442053 2443072 . + . ID=gene-PUW35_12055;Name=PUW35_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12055 CP118132.1 Protein Homology CDS 2442053 2443072 . + 0 ID=cds-WJG91491.1;Parent=gene-PUW35_12055;Dbxref=NCBI_GP:WJG91491.1;Name=WJG91491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=PUW35_12055;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG91491.1;transl_table=11 CP118132.1 Genbank gene 2443078 2443632 . - . ID=gene-PUW35_12060;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=PUW35_12060 CP118132.1 Protein Homology CDS 2443078 2443632 . - 0 ID=cds-WJG91492.1;Parent=gene-PUW35_12060;Dbxref=NCBI_GP:WJG91492.1;Name=WJG91492.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=PUW35_12060;product=NUDIX hydrolase YfcD;protein_id=WJG91492.1;transl_table=11 CP118132.1 Genbank gene 2443689 2444240 . - . ID=gene-PUW35_12065;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=PUW35_12065 CP118132.1 Protein Homology CDS 2443689 2444240 . - 0 ID=cds-WJG91493.1;Parent=gene-PUW35_12065;Dbxref=NCBI_GP:WJG91493.1;Name=WJG91493.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=PUW35_12065;product=phosphodiesterase;protein_id=WJG91493.1;transl_table=11 CP118132.1 Genbank gene 2444296 2444940 . - . ID=gene-PUW35_12070;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=PUW35_12070 CP118132.1 Protein Homology CDS 2444296 2444940 . - 0 ID=cds-WJG91494.1;Parent=gene-PUW35_12070;Dbxref=NCBI_GP:WJG91494.1;Name=WJG91494.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=PUW35_12070;product=glutathione transferase;protein_id=WJG91494.1;transl_table=11 CP118132.1 Genbank gene 2445083 2445730 . + . ID=gene-PUW35_12075;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=PUW35_12075 CP118132.1 Protein Homology CDS 2445083 2445730 . + 0 ID=cds-WJG91495.1;Parent=gene-PUW35_12075;Dbxref=NCBI_GP:WJG91495.1;Name=WJG91495.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=PUW35_12075;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WJG91495.1;transl_table=11 CP118132.1 Genbank gene 2445856 2446749 . + . ID=gene-PUW35_12080;Name=PUW35_12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12080 CP118132.1 Protein Homology CDS 2445856 2446749 . + 0 ID=cds-WJG91496.1;Parent=gene-PUW35_12080;Dbxref=NCBI_GP:WJG91496.1;Name=WJG91496.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=PUW35_12080;product=TIGR01777 family oxidoreductase;protein_id=WJG91496.1;transl_table=11 CP118132.1 Genbank gene 2446801 2447574 . - . ID=gene-PUW35_12085;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=PUW35_12085 CP118132.1 Protein Homology CDS 2446801 2447574 . - 0 ID=cds-WJG95092.1;Parent=gene-PUW35_12085;Dbxref=NCBI_GP:WJG95092.1;Name=WJG95092.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=PUW35_12085;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WJG95092.1;transl_table=11 CP118132.1 Genbank gene 2447588 2448295 . - . ID=gene-PUW35_12090;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=PUW35_12090 CP118132.1 Protein Homology CDS 2447588 2448295 . - 0 ID=cds-WJG91497.1;Parent=gene-PUW35_12090;Dbxref=NCBI_GP:WJG91497.1;Name=WJG91497.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=PUW35_12090;product=histidine ABC transporter permease HisM;protein_id=WJG91497.1;transl_table=11 CP118132.1 Genbank gene 2448292 2448978 . - . ID=gene-PUW35_12095;Name=PUW35_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12095 CP118132.1 Protein Homology CDS 2448292 2448978 . - 0 ID=cds-WJG91498.1;Parent=gene-PUW35_12095;Dbxref=NCBI_GP:WJG91498.1;Name=WJG91498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=PUW35_12095;product=histidine ABC transporter permease HisQ;protein_id=WJG91498.1;transl_table=11 CP118132.1 Genbank gene 2449161 2449943 . - . ID=gene-PUW35_12100;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=PUW35_12100 CP118132.1 Protein Homology CDS 2449161 2449943 . - 0 ID=cds-WJG91499.1;Parent=gene-PUW35_12100;Dbxref=NCBI_GP:WJG91499.1;Name=WJG91499.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=PUW35_12100;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WJG91499.1;transl_table=11 CP118132.1 Genbank gene 2450181 2450963 . - . ID=gene-PUW35_12105;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=PUW35_12105 CP118132.1 Protein Homology CDS 2450181 2450963 . - 0 ID=cds-WJG91500.1;Parent=gene-PUW35_12105;Dbxref=NCBI_GP:WJG91500.1;Name=WJG91500.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=PUW35_12105;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WJG91500.1;transl_table=11 CP118132.1 Genbank gene 2451252 2451821 . - . ID=gene-PUW35_12110;Name=PUW35_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12110 CP118132.1 Protein Homology CDS 2451252 2451821 . - 0 ID=cds-WJG91501.1;Parent=gene-PUW35_12110;Dbxref=NCBI_GP:WJG91501.1;Name=WJG91501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=PUW35_12110;product=UbiX family flavin prenyltransferase;protein_id=WJG91501.1;transl_table=11 CP118132.1 Genbank gene 2451848 2453254 . - . ID=gene-PUW35_12115;Name=PUW35_12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12115 CP118132.1 Protein Homology CDS 2451848 2453254 . - 0 ID=cds-WJG91502.1;Parent=gene-PUW35_12115;Dbxref=NCBI_GP:WJG91502.1;Name=WJG91502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=PUW35_12115;product=amino acid permease;protein_id=WJG91502.1;transl_table=11 CP118132.1 Genbank gene 2453318 2454421 . - . ID=gene-PUW35_12120;Name=PUW35_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12120 CP118132.1 Protein Homology CDS 2453318 2454421 . - 0 ID=cds-WJG91503.1;Parent=gene-PUW35_12120;Dbxref=NCBI_GP:WJG91503.1;Name=WJG91503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=PUW35_12120;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WJG91503.1;transl_table=11 CP118132.1 Genbank pseudogene 2454423 2455844 . - . ID=gene-PUW35_12125;Name=PUW35_12125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12125;pseudo=true CP118132.1 Protein Homology CDS 2454423 2455844 . - 0 ID=cds-PUW35_12125;Parent=gene-PUW35_12125;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=PUW35_12125;product=APC family permease;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2455935 2457332 . - . ID=gene-PUW35_12130;Name=PUW35_12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12130 CP118132.1 Protein Homology CDS 2455935 2457332 . - 0 ID=cds-WJG91504.1;Parent=gene-PUW35_12130;Dbxref=NCBI_GP:WJG91504.1;Name=WJG91504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=PUW35_12130;product=alanine racemase;protein_id=WJG91504.1;transl_table=11 CP118132.1 Genbank pseudogene 2457543 2458969 . + . ID=gene-PUW35_12135;Name=PUW35_12135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12135;pseudo=true CP118132.1 Protein Homology CDS 2457543 2458969 . + 0 ID=cds-PUW35_12135;Parent=gene-PUW35_12135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=PUW35_12135;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2459005 2460522 . - . ID=gene-PUW35_12140;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=PUW35_12140 CP118132.1 Protein Homology CDS 2459005 2460522 . - 0 ID=cds-WJG91505.1;Parent=gene-PUW35_12140;Dbxref=NCBI_GP:WJG91505.1;Name=WJG91505.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=PUW35_12140;product=amidophosphoribosyltransferase;protein_id=WJG91505.1;transl_table=11 CP118132.1 Genbank gene 2460560 2461048 . - . ID=gene-PUW35_12145;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=PUW35_12145 CP118132.1 Protein Homology CDS 2460560 2461048 . - 0 ID=cds-WJG91506.1;Parent=gene-PUW35_12145;Dbxref=NCBI_GP:WJG91506.1;Name=WJG91506.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=PUW35_12145;product=colicin V production protein;protein_id=WJG91506.1;transl_table=11 CP118132.1 Genbank gene 2461359 2462033 . - . ID=gene-PUW35_12150;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=PUW35_12150 CP118132.1 Protein Homology CDS 2461359 2462033 . - 0 ID=cds-WJG91507.1;Parent=gene-PUW35_12150;Dbxref=NCBI_GP:WJG91507.1;Name=WJG91507.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=PUW35_12150;product=cell division protein DedD;protein_id=WJG91507.1;transl_table=11 CP118132.1 Genbank pseudogene 2462023 2463289 . - . ID=gene-PUW35_12155;Name=folC;gbkey=Gene;gene=folC;gene_biotype=pseudogene;locus_tag=PUW35_12155;pseudo=true CP118132.1 Protein Homology CDS 2462023 2463289 . - 0 ID=cds-PUW35_12155;Parent=gene-PUW35_12155;Note=frameshifted;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=PUW35_12155;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2463357 2464270 . - . ID=gene-PUW35_12160;Name=accD;gbkey=Gene;gene=accD;gene_biotype=pseudogene;locus_tag=PUW35_12160;pseudo=true CP118132.1 Protein Homology CDS 2463357 2464270 . - 0 ID=cds-PUW35_12160;Parent=gene-PUW35_12160;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=PUW35_12160;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2464420 2465079 . - . ID=gene-PUW35_12165;Name=PUW35_12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12165 CP118132.1 Protein Homology CDS 2464420 2465079 . - 0 ID=cds-WJG91508.1;Parent=gene-PUW35_12165;Dbxref=NCBI_GP:WJG91508.1;Name=WJG91508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=PUW35_12165;product=DedA family protein;protein_id=WJG91508.1;transl_table=11 CP118132.1 Genbank gene 2465128 2465940 . - . ID=gene-PUW35_12170;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=PUW35_12170 CP118132.1 Protein Homology CDS 2465128 2465940 . - 0 ID=cds-WJG91509.1;Parent=gene-PUW35_12170;Dbxref=NCBI_GP:WJG91509.1;Name=WJG91509.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=PUW35_12170;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WJG91509.1;transl_table=11 CP118132.1 Genbank gene 2465940 2466953 . - . ID=gene-PUW35_12175;Name=PUW35_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12175 CP118132.1 Protein Homology CDS 2465940 2466953 . - 0 ID=cds-WJG91510.1;Parent=gene-PUW35_12175;Dbxref=NCBI_GP:WJG91510.1;Name=WJG91510.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=PUW35_12175;product=aspartate-semialdehyde dehydrogenase;protein_id=WJG91510.1;transl_table=11 CP118132.1 Genbank gene 2467021 2468157 . - . ID=gene-PUW35_12180;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=PUW35_12180 CP118132.1 Protein Homology CDS 2467021 2468157 . - 0 ID=cds-WJG91511.1;Parent=gene-PUW35_12180;Dbxref=NCBI_GP:WJG91511.1;Name=WJG91511.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=PUW35_12180;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WJG91511.1;transl_table=11 CP118132.1 Genbank pseudogene 2468261 2469261 . + . ID=gene-PUW35_12185;Name=flk;gbkey=Gene;gene=flk;gene_biotype=pseudogene;locus_tag=PUW35_12185;pseudo=true CP118132.1 Protein Homology CDS 2468261 2469261 . + 0 ID=cds-PUW35_12185;Parent=gene-PUW35_12185;Note=frameshifted;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=PUW35_12185;product=flagella biosynthesis regulator Flk;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2469258 2470436 . - . ID=gene-PUW35_12190;Name=PUW35_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12190 CP118132.1 Protein Homology CDS 2469258 2470436 . - 0 ID=cds-WJG91512.1;Parent=gene-PUW35_12190;Dbxref=NCBI_GP:WJG91512.1;Name=WJG91512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=PUW35_12190;product=MFS transporter;protein_id=WJG91512.1;transl_table=11 CP118132.1 Genbank gene 2470616 2470990 . - . ID=gene-PUW35_12195;Name=PUW35_12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12195 CP118132.1 Protein Homology CDS 2470616 2470990 . - 0 ID=cds-WJG91513.1;Parent=gene-PUW35_12195;Dbxref=NCBI_GP:WJG91513.1;Name=WJG91513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=PUW35_12195;product=hypothetical protein;protein_id=WJG91513.1;transl_table=11 CP118132.1 Genbank pseudogene 2471163 2471410 . + . ID=gene-PUW35_12200;Name=PUW35_12200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12200;pseudo=true CP118132.1 Protein Homology CDS 2471163 2471410 . + 0 ID=cds-PUW35_12200;Parent=gene-PUW35_12200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=PUW35_12200;product=transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2471579 2471947 . + . ID=gene-PUW35_12205;Name=PUW35_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12205 CP118132.1 Protein Homology CDS 2471579 2471947 . + 0 ID=cds-WJG91514.1;Parent=gene-PUW35_12205;Dbxref=NCBI_GP:WJG91514.1;Name=WJG91514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=PUW35_12205;product=NlpC/P60 family protein;protein_id=WJG91514.1;transl_table=11 CP118132.1 Genbank gene 2471947 2472465 . + . ID=gene-PUW35_12210;Name=PUW35_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12210 CP118132.1 Protein Homology CDS 2471947 2472465 . + 0 ID=cds-WJG91515.1;Parent=gene-PUW35_12210;Dbxref=NCBI_GP:WJG91515.1;Name=WJG91515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=PUW35_12210;product=YbjP/YqhG family protein;protein_id=WJG91515.1;transl_table=11 CP118132.1 Genbank gene 2472532 2473188 . - . ID=gene-PUW35_12215;Name=PUW35_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12215 CP118132.1 Protein Homology CDS 2472532 2473188 . - 0 ID=cds-WJG91516.1;Parent=gene-PUW35_12215;Dbxref=NCBI_GP:WJG91516.1;Name=WJG91516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=PUW35_12215;product=type II CAAX endopeptidase family protein;protein_id=WJG91516.1;transl_table=11 CP118132.1 Genbank gene 2473286 2474500 . - . ID=gene-PUW35_12220;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=PUW35_12220 CP118132.1 Protein Homology CDS 2473286 2474500 . - 0 ID=cds-WJG91517.1;Parent=gene-PUW35_12220;Dbxref=NCBI_GP:WJG91517.1;Name=WJG91517.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=PUW35_12220;product=beta-ketoacyl-ACP synthase I;protein_id=WJG91517.1;transl_table=11 CP118132.1 Genbank pseudogene 2474660 2476659 . + . ID=gene-PUW35_12225;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=pseudogene;locus_tag=PUW35_12225;pseudo=true CP118132.1 Protein Homology CDS 2474660 2476659 . + 0 ID=cds-PUW35_12225;Parent=gene-PUW35_12225;Note=frameshifted;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=PUW35_12225;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2476711 2476986 . - . ID=gene-PUW35_12230;Name=PUW35_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12230 CP118132.1 Protein Homology CDS 2476711 2476986 . - 0 ID=cds-WJG91518.1;Parent=gene-PUW35_12230;Dbxref=NCBI_GP:WJG91518.1;Name=WJG91518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=PUW35_12230;product=YfcL family protein;protein_id=WJG91518.1;transl_table=11 CP118132.1 Genbank gene 2477019 2477567 . - . ID=gene-PUW35_12235;Name=PUW35_12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12235 CP118132.1 Protein Homology CDS 2477019 2477567 . - 0 ID=cds-WJG91519.1;Parent=gene-PUW35_12235;Dbxref=NCBI_GP:WJG91519.1;Name=WJG91519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=PUW35_12235;product=elongation factor P hydroxylase;protein_id=WJG91519.1;transl_table=11 CP118132.1 Genbank gene 2477567 2478376 . - . ID=gene-PUW35_12240;Name=PUW35_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12240 CP118132.1 Protein Homology CDS 2477567 2478376 . - 0 ID=cds-WJG91520.1;Parent=gene-PUW35_12240;Dbxref=NCBI_GP:WJG91520.1;Name=WJG91520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=PUW35_12240;product=sulfite exporter TauE/SafE family protein;protein_id=WJG91520.1;transl_table=11 CP118132.1 Genbank gene 2478376 2479200 . - . ID=gene-PUW35_12245;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=PUW35_12245 CP118132.1 Protein Homology CDS 2478376 2479200 . - 0 ID=cds-WJG91521.1;Parent=gene-PUW35_12245;Dbxref=NCBI_GP:WJG91521.1;Name=WJG91521.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=PUW35_12245;product=penicillin-insensitive murein endopeptidase;protein_id=WJG91521.1;transl_table=11 CP118132.1 Genbank gene 2479204 2480289 . - . ID=gene-PUW35_12250;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=PUW35_12250 CP118132.1 Protein Homology CDS 2479204 2480289 . - 0 ID=cds-WJG91522.1;Parent=gene-PUW35_12250;Dbxref=NCBI_GP:WJG91522.1;Name=WJG91522.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=PUW35_12250;product=chorismate synthase;protein_id=WJG91522.1;transl_table=11 CP118132.1 Genbank gene 2480325 2481257 . - . ID=gene-PUW35_12255;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=PUW35_12255 CP118132.1 Protein Homology CDS 2480325 2481257 . - 0 ID=cds-WJG91523.1;Parent=gene-PUW35_12255;Dbxref=NCBI_GP:WJG91523.1;Name=WJG91523.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=PUW35_12255;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WJG91523.1;transl_table=11 CP118132.1 Genbank gene 2481423 2481974 . + . ID=gene-PUW35_12260;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=PUW35_12260 CP118132.1 Protein Homology CDS 2481423 2481974 . + 0 ID=cds-WJG91524.1;Parent=gene-PUW35_12260;Dbxref=NCBI_GP:WJG91524.1;Name=WJG91524.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=PUW35_12260;product=endonuclease SmrB;protein_id=WJG91524.1;transl_table=11 CP118132.1 Genbank gene 2482074 2482559 . - . ID=gene-PUW35_12265;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=PUW35_12265 CP118132.1 Protein Homology CDS 2482074 2482559 . - 0 ID=cds-WJG91525.1;Parent=gene-PUW35_12265;Dbxref=NCBI_GP:WJG91525.1;Name=WJG91525.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=PUW35_12265;product=phosphohistidine phosphatase SixA;protein_id=WJG91525.1;transl_table=11 CP118132.1 Genbank pseudogene 2482768 2484914 . - . ID=gene-PUW35_12270;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=pseudogene;locus_tag=PUW35_12270;pseudo=true CP118132.1 Protein Homology CDS 2482768 2484914 . - 0 ID=cds-PUW35_12270;Parent=gene-PUW35_12270;Note=frameshifted;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=PUW35_12270;product=fatty acid oxidation complex subunit alpha FadJ;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2484914 2486225 . - . ID=gene-PUW35_12275;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=pseudogene;locus_tag=PUW35_12275;pseudo=true CP118132.1 Protein Homology CDS 2484914 2486225 . - 0 ID=cds-PUW35_12275;Parent=gene-PUW35_12275;Note=frameshifted;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=PUW35_12275;product=acetyl-CoA C-acyltransferase FadI;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2486402 2486686 . - . ID=gene-PUW35_12280;Name=PUW35_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12280 CP118132.1 Protein Homology CDS 2486402 2486686 . - 0 ID=cds-WJG91526.1;Parent=gene-PUW35_12280;Dbxref=NCBI_GP:WJG91526.1;Name=WJG91526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=PUW35_12280;product=YfcZ/YiiS family protein;protein_id=WJG91526.1;transl_table=11 CP118132.1 Genbank gene 2487057 2488364 . + . ID=gene-PUW35_12285;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=PUW35_12285 CP118132.1 Protein Homology CDS 2487057 2488364 . + 0 ID=cds-WJG91527.1;Parent=gene-PUW35_12285;Dbxref=NCBI_GP:WJG91527.1;Name=WJG91527.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=PUW35_12285;product=long-chain fatty acid transporter FadL;protein_id=WJG91527.1;transl_table=11 CP118132.1 Genbank gene 2488425 2489180 . - . ID=gene-PUW35_12290;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=PUW35_12290 CP118132.1 Protein Homology CDS 2488425 2489180 . - 0 ID=cds-WJG91528.1;Parent=gene-PUW35_12290;Dbxref=NCBI_GP:WJG91528.1;Name=WJG91528.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=PUW35_12290;product=phospholipid-binding lipoprotein MlaA;protein_id=WJG91528.1;transl_table=11 CP118132.1 Genbank gene 2489469 2490410 . + . ID=gene-PUW35_12295;Name=PUW35_12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12295 CP118132.1 Protein Homology CDS 2489469 2490410 . + 0 ID=cds-WJG91529.1;Parent=gene-PUW35_12295;Dbxref=NCBI_GP:WJG91529.1;Name=WJG91529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=PUW35_12295;product=formate/nitrite transporter family protein;protein_id=WJG91529.1;transl_table=11 CP118132.1 Genbank gene 2490486 2490560 . + . ID=gene-PUW35_12300;Name=PUW35_12300;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_12300 CP118132.1 tRNAscan-SE tRNA 2490486 2490560 . + . ID=rna-PUW35_12300;Parent=gene-PUW35_12300;anticodon=(pos:2490519..2490521);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12300;product=tRNA-Arg CP118132.1 tRNAscan-SE exon 2490486 2490560 . + . ID=exon-PUW35_12300-1;Parent=rna-PUW35_12300;anticodon=(pos:2490519..2490521);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12300;product=tRNA-Arg CP118132.1 Genbank pseudogene 2490708 2491332 . - . ID=gene-PUW35_12305;Name=PUW35_12305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12305;pseudo=true CP118132.1 Protein Homology CDS 2490708 2491332 . - 0 ID=cds-PUW35_12305;Parent=gene-PUW35_12305;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=PUW35_12305;product=transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2491652 2492041 . + . ID=gene-PUW35_12310;Name=PUW35_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12310 CP118132.1 Protein Homology CDS 2491652 2492041 . + 0 ID=cds-WJG91530.1;Parent=gene-PUW35_12310;Dbxref=NCBI_GP:WJG91530.1;Name=WJG91530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696807.1;locus_tag=PUW35_12310;product=GtrA family protein;protein_id=WJG91530.1;transl_table=11 CP118132.1 Genbank pseudogene 2492010 2492228 . + . ID=gene-PUW35_12315;Name=PUW35_12315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12315;pseudo=true CP118132.1 Protein Homology CDS 2492010 2492228 . + 0 ID=cds-PUW35_12315;Parent=gene-PUW35_12315;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=PUW35_12315;product=glycosyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2492282 2494204 . + . ID=gene-PUW35_12320;Name=PUW35_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12320 CP118132.1 Protein Homology CDS 2492282 2494204 . + 0 ID=cds-WJG91531.1;Parent=gene-PUW35_12320;Dbxref=NCBI_GP:WJG91531.1;Name=WJG91531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400614.1;locus_tag=PUW35_12320;product=acyltransferase family protein;protein_id=WJG91531.1;transl_table=11 CP118132.1 Genbank pseudogene 2494375 2494821 . - . ID=gene-PUW35_12325;Name=PUW35_12325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12325;pseudo=true CP118132.1 Protein Homology CDS 2494375 2494821 . - 0 ID=cds-PUW35_12325;Parent=gene-PUW35_12325;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=PUW35_12325;product=transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2495194 2495301 . - . ID=gene-PUW35_12330;Name=PUW35_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12330 CP118132.1 Protein Homology CDS 2495194 2495301 . - 0 ID=cds-WJG95093.1;Parent=gene-PUW35_12330;Dbxref=NCBI_GP:WJG95093.1;Name=WJG95093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020812.2;locus_tag=PUW35_12330;product=hypothetical protein;protein_id=WJG95093.1;transl_table=11 CP118132.1 Genbank gene 2495382 2495525 . - . ID=gene-PUW35_12335;Name=PUW35_12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12335 CP118132.1 Protein Homology CDS 2495382 2495525 . - 0 ID=cds-WJG91532.1;Parent=gene-PUW35_12335;Dbxref=NCBI_GP:WJG91532.1;Name=WJG91532.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020812.2;locus_tag=PUW35_12335;product=tail spike protein;protein_id=WJG91532.1;transl_table=11 CP118132.1 Genbank pseudogene 2495720 2496657 . - . ID=gene-PUW35_12340;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=pseudogene;locus_tag=PUW35_12340;pseudo=true CP118132.1 Protein Homology CDS 2495720 2496657 . - 0 ID=cds-PUW35_12340;Parent=gene-PUW35_12340;Note=frameshifted;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=PUW35_12340;product=omptin family outer membrane protease PgtE;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2496925 2498172 . - . ID=gene-PUW35_12345;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=PUW35_12345 CP118132.1 Protein Homology CDS 2496925 2498172 . - 0 ID=cds-WJG95094.1;Parent=gene-PUW35_12345;Dbxref=NCBI_GP:WJG95094.1;Name=WJG95094.1;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=PUW35_12345;product=two-component system response regulator PgtA;protein_id=WJG95094.1;transl_table=11 CP118132.1 Genbank gene 2498162 2500168 . - . ID=gene-PUW35_12350;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=PUW35_12350 CP118132.1 Protein Homology CDS 2498162 2500168 . - 0 ID=cds-WJG91533.1;Parent=gene-PUW35_12350;Dbxref=NCBI_GP:WJG91533.1;Name=WJG91533.1;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=PUW35_12350;product=two-component system sensor histidine kinase PgtB;protein_id=WJG91533.1;transl_table=11 CP118132.1 Genbank gene 2500165 2501358 . - . ID=gene-PUW35_12355;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=PUW35_12355 CP118132.1 Protein Homology CDS 2500165 2501358 . - 0 ID=cds-WJG95095.1;Parent=gene-PUW35_12355;Dbxref=NCBI_GP:WJG95095.1;Name=WJG95095.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=PUW35_12355;product=phosphoglycerate transport regulator PgtC;protein_id=WJG95095.1;transl_table=11 CP118132.1 Genbank pseudogene 2501794 2503183 . + . ID=gene-PUW35_12360;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=pseudogene;locus_tag=PUW35_12360;pseudo=true CP118132.1 Protein Homology CDS 2501794 2503183 . + 0 ID=cds-PUW35_12360;Parent=gene-PUW35_12360;Note=frameshifted;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=PUW35_12360;product=phosphoglycerate transporter PgtP;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2503458 2503700 . - . ID=gene-PUW35_12365;Name=PUW35_12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12365 CP118132.1 Protein Homology CDS 2503458 2503700 . - 0 ID=cds-WJG91534.1;Parent=gene-PUW35_12365;Dbxref=NCBI_GP:WJG91534.1;Name=WJG91534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=PUW35_12365;product=YfdY family protein;protein_id=WJG91534.1;transl_table=11 CP118132.1 Genbank gene 2504222 2505142 . + . ID=gene-PUW35_12370;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=PUW35_12370 CP118132.1 Protein Homology CDS 2504222 2505142 . + 0 ID=cds-WJG91535.1;Parent=gene-PUW35_12370;Dbxref=NCBI_GP:WJG91535.1;Name=WJG91535.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=PUW35_12370;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WJG91535.1;transl_table=11 CP118132.1 Genbank gene 2505545 2505616 . + . ID=gene-PUW35_12375;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=PUW35_12375 CP118132.1 Protein Homology CDS 2505545 2505616 . + 0 ID=cds-WJG95096.1;Parent=gene-PUW35_12375;Dbxref=NCBI_GP:WJG95096.1;Name=WJG95096.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=PUW35_12375;product=membrane protein YpdK;protein_id=WJG95096.1;transl_table=11 CP118132.1 Genbank gene 2505666 2506904 . - . ID=gene-PUW35_12380;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=PUW35_12380 CP118132.1 Protein Homology CDS 2505666 2506904 . - 0 ID=cds-WJG91536.1;Parent=gene-PUW35_12380;Dbxref=NCBI_GP:WJG91536.1;Name=WJG91536.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=PUW35_12380;product=alanine transaminase;protein_id=WJG91536.1;transl_table=11 CP118132.1 Genbank gene 2507627 2508592 . - . ID=gene-PUW35_12385;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=PUW35_12385 CP118132.1 Protein Homology CDS 2507627 2508592 . - 0 ID=cds-WJG91537.1;Parent=gene-PUW35_12385;Dbxref=NCBI_GP:WJG91537.1;Name=WJG91537.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=PUW35_12385;product=glucokinase;protein_id=WJG91537.1;transl_table=11 CP118132.1 Genbank gene 2508796 2510037 . + . ID=gene-PUW35_12390;Name=PUW35_12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12390 CP118132.1 Protein Homology CDS 2508796 2510037 . + 0 ID=cds-WJG91538.1;Parent=gene-PUW35_12390;Dbxref=NCBI_GP:WJG91538.1;Name=WJG91538.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=PUW35_12390;product=ion channel protein;protein_id=WJG91538.1;transl_table=11 CP118132.1 Genbank gene 2510057 2511709 . - . ID=gene-PUW35_12395;Name=PUW35_12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12395 CP118132.1 Protein Homology CDS 2510057 2511709 . - 0 ID=cds-WJG91539.1;Parent=gene-PUW35_12395;Dbxref=NCBI_GP:WJG91539.1;Name=WJG91539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=PUW35_12395;product=alpha-keto acid decarboxylase family protein;protein_id=WJG91539.1;transl_table=11 CP118132.1 Genbank gene 2511889 2512887 . + . ID=gene-PUW35_12400;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=PUW35_12400 CP118132.1 Protein Homology CDS 2511889 2512887 . + 0 ID=cds-WJG91540.1;Parent=gene-PUW35_12400;Dbxref=NCBI_GP:WJG91540.1;Name=WJG91540.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=PUW35_12400;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WJG91540.1;transl_table=11 CP118132.1 Genbank gene 2513001 2513327 . + . ID=gene-PUW35_12405;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=PUW35_12405 CP118132.1 Protein Homology CDS 2513001 2513327 . + 0 ID=cds-WJG91541.1;Parent=gene-PUW35_12405;Dbxref=NCBI_GP:WJG91541.1;Name=WJG91541.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=PUW35_12405;product=DUF2502 domain-containing protein YpeC;protein_id=WJG91541.1;transl_table=11 CP118132.1 Genbank gene 2513388 2514629 . - . ID=gene-PUW35_12410;Name=PUW35_12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12410 CP118132.1 Protein Homology CDS 2513388 2514629 . - 0 ID=cds-WJG91542.1;Parent=gene-PUW35_12410;Dbxref=NCBI_GP:WJG91542.1;Name=WJG91542.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=PUW35_12410;product=Nramp family divalent metal transporter;protein_id=WJG91542.1;transl_table=11 CP118132.1 Genbank gene 2514972 2516174 . + . ID=gene-PUW35_12415;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=PUW35_12415 CP118132.1 Protein Homology CDS 2514972 2516174 . + 0 ID=cds-WJG91543.1;Parent=gene-PUW35_12415;Dbxref=NCBI_GP:WJG91543.1;Name=WJG91543.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=PUW35_12415;product=nucleoside permease NupC;protein_id=WJG91543.1;transl_table=11 CP118132.1 Genbank pseudogene 2516227 2518415 . - . ID=gene-PUW35_12420;Name=PUW35_12420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12420;pseudo=true CP118132.1 Protein Homology CDS 2516227 2518415 . - 0 ID=cds-PUW35_12420;Parent=gene-PUW35_12420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=PUW35_12420;product=sensor domain-containing phosphodiesterase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2518606 2518681 . - . ID=gene-PUW35_12425;Name=PUW35_12425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_12425 CP118132.1 tRNAscan-SE tRNA 2518606 2518681 . - . ID=rna-PUW35_12425;Parent=gene-PUW35_12425;anticodon=(pos:complement(2518646..2518648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12425;product=tRNA-Ala CP118132.1 tRNAscan-SE exon 2518606 2518681 . - . ID=exon-PUW35_12425-1;Parent=rna-PUW35_12425;anticodon=(pos:complement(2518646..2518648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12425;product=tRNA-Ala CP118132.1 Genbank gene 2518903 2519265 . + . ID=gene-PUW35_12430;Name=PUW35_12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12430 CP118132.1 Protein Homology CDS 2518903 2519265 . + 0 ID=cds-WJG91544.1;Parent=gene-PUW35_12430;Dbxref=NCBI_GP:WJG91544.1;Name=WJG91544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=PUW35_12430;product=putative DNA-binding transcriptional regulator;protein_id=WJG91544.1;transl_table=11 CP118132.1 Genbank gene 2519267 2519659 . + . ID=gene-PUW35_12435;Name=PUW35_12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12435 CP118132.1 Protein Homology CDS 2519267 2519659 . + 0 ID=cds-WJG91545.1;Parent=gene-PUW35_12435;Dbxref=NCBI_GP:WJG91545.1;Name=WJG91545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=PUW35_12435;product=putative DNA-binding transcriptional regulator;protein_id=WJG91545.1;transl_table=11 CP118132.1 Genbank gene 2519713 2521128 . - . ID=gene-PUW35_12440;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=PUW35_12440 CP118132.1 Protein Homology CDS 2519713 2521128 . - 0 ID=cds-WJG91546.1;Parent=gene-PUW35_12440;Dbxref=NCBI_GP:WJG91546.1;Name=WJG91546.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=PUW35_12440;product=glutamate--tRNA ligase;protein_id=WJG91546.1;transl_table=11 CP118132.1 Genbank gene 2521387 2521462 . + . ID=gene-PUW35_12445;Name=PUW35_12445;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_12445 CP118132.1 tRNAscan-SE tRNA 2521387 2521462 . + . ID=rna-PUW35_12445;Parent=gene-PUW35_12445;anticodon=(pos:2521420..2521422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12445;product=tRNA-Val CP118132.1 tRNAscan-SE exon 2521387 2521462 . + . ID=exon-PUW35_12445-1;Parent=rna-PUW35_12445;anticodon=(pos:2521420..2521422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12445;product=tRNA-Val CP118132.1 Genbank gene 2521508 2521583 . + . ID=gene-PUW35_12450;Name=PUW35_12450;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_12450 CP118132.1 tRNAscan-SE tRNA 2521508 2521583 . + . ID=rna-PUW35_12450;Parent=gene-PUW35_12450;anticodon=(pos:2521541..2521543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12450;product=tRNA-Val CP118132.1 tRNAscan-SE exon 2521508 2521583 . + . ID=exon-PUW35_12450-1;Parent=rna-PUW35_12450;anticodon=(pos:2521541..2521543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12450;product=tRNA-Val CP118132.1 Genbank gene 2521588 2521663 . + . ID=gene-PUW35_12455;Name=PUW35_12455;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_12455 CP118132.1 tRNAscan-SE tRNA 2521588 2521663 . + . ID=rna-PUW35_12455;Parent=gene-PUW35_12455;anticodon=(pos:2521621..2521623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12455;product=tRNA-Lys CP118132.1 tRNAscan-SE exon 2521588 2521663 . + . ID=exon-PUW35_12455-1;Parent=rna-PUW35_12455;anticodon=(pos:2521621..2521623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_12455;product=tRNA-Lys CP118132.1 Genbank gene 2521827 2522711 . - . ID=gene-PUW35_12460;Name=PUW35_12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12460 CP118132.1 Protein Homology CDS 2521827 2522711 . - 0 ID=cds-WJG95097.1;Parent=gene-PUW35_12460;Dbxref=NCBI_GP:WJG95097.1;Name=WJG95097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=PUW35_12460;product=LysR family transcriptional regulator;protein_id=WJG95097.1;transl_table=11 CP118132.1 Genbank gene 2522763 2522921 . - . ID=gene-PUW35_12465;Name=PUW35_12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12465 CP118132.1 Protein Homology CDS 2522763 2522921 . - 0 ID=cds-WJG91547.1;Parent=gene-PUW35_12465;Dbxref=NCBI_GP:WJG91547.1;Name=WJG91547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=PUW35_12465;product=DUF1427 family protein;protein_id=WJG91547.1;transl_table=11 CP118132.1 Genbank gene 2522980 2524236 . - . ID=gene-PUW35_12470;Name=PUW35_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12470 CP118132.1 Protein Homology CDS 2522980 2524236 . - 0 ID=cds-WJG91548.1;Parent=gene-PUW35_12470;Dbxref=NCBI_GP:WJG91548.1;Name=WJG91548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=PUW35_12470;product=nucleoside permease;protein_id=WJG91548.1;transl_table=11 CP118132.1 Genbank gene 2524291 2525124 . - . ID=gene-PUW35_12475;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=PUW35_12475 CP118132.1 Protein Homology CDS 2524291 2525124 . - 0 ID=cds-WJG91549.1;Parent=gene-PUW35_12475;Dbxref=NCBI_GP:WJG91549.1;Name=WJG91549.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=xapA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=PUW35_12475;product=xanthosine phosphorylase;protein_id=WJG91549.1;transl_table=11 CP118132.1 Genbank gene 2525380 2526141 . + . ID=gene-PUW35_12480;Name=PUW35_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12480 CP118132.1 Protein Homology CDS 2525380 2526141 . + 0 ID=cds-WJG91550.1;Parent=gene-PUW35_12480;Dbxref=NCBI_GP:WJG91550.1;Name=WJG91550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=PUW35_12480;product=outer membrane protein;protein_id=WJG91550.1;transl_table=11 CP118132.1 Genbank gene 2526203 2527129 . - . ID=gene-PUW35_12485;Name=PUW35_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12485 CP118132.1 Protein Homology CDS 2526203 2527129 . - 0 ID=cds-WJG91551.1;Parent=gene-PUW35_12485;Dbxref=NCBI_GP:WJG91551.1;Name=WJG91551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=PUW35_12485;product=LysR family transcriptional regulator;protein_id=WJG91551.1;transl_table=11 CP118132.1 Genbank gene 2527219 2528217 . + . ID=gene-PUW35_12490;Name=PUW35_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12490 CP118132.1 Protein Homology CDS 2527219 2528217 . + 0 ID=cds-WJG91552.1;Parent=gene-PUW35_12490;Dbxref=NCBI_GP:WJG91552.1;Name=WJG91552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=PUW35_12490;product=bile acid:sodium symporter;protein_id=WJG91552.1;transl_table=11 CP118132.1 Genbank gene 2528214 2528432 . - . ID=gene-PUW35_12495;Name=PUW35_12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12495 CP118132.1 Protein Homology CDS 2528214 2528432 . - 0 ID=cds-WJG91553.1;Parent=gene-PUW35_12495;Dbxref=NCBI_GP:WJG91553.1;Name=WJG91553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=PUW35_12495;product=DUF3820 family protein;protein_id=WJG91553.1;transl_table=11 CP118132.1 Genbank gene 2528434 2530449 . - . ID=gene-PUW35_12500;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=PUW35_12500 CP118132.1 Protein Homology CDS 2528434 2530449 . - 0 ID=cds-WJG91554.1;Parent=gene-PUW35_12500;Dbxref=NCBI_GP:WJG91554.1;Name=WJG91554.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=PUW35_12500;product=NAD-dependent DNA ligase LigA;protein_id=WJG91554.1;transl_table=11 CP118132.1 Genbank gene 2530521 2531507 . - . ID=gene-PUW35_12505;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=PUW35_12505 CP118132.1 Protein Homology CDS 2530521 2531507 . - 0 ID=cds-WJG91555.1;Parent=gene-PUW35_12505;Dbxref=NCBI_GP:WJG91555.1;Name=WJG91555.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=PUW35_12505;product=cell division protein ZipA;protein_id=WJG91555.1;transl_table=11 CP118132.1 Genbank gene 2531739 2532500 . + . ID=gene-PUW35_12510;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=PUW35_12510 CP118132.1 Protein Homology CDS 2531739 2532500 . + 0 ID=cds-WJG91556.1;Parent=gene-PUW35_12510;Dbxref=NCBI_GP:WJG91556.1;Name=WJG91556.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=PUW35_12510;product=sulfate transporter CysZ;protein_id=WJG91556.1;transl_table=11 CP118132.1 Genbank gene 2532664 2533635 . + . ID=gene-PUW35_12515;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=PUW35_12515 CP118132.1 Protein Homology CDS 2532664 2533635 . + 0 ID=cds-WJG91557.1;Parent=gene-PUW35_12515;Dbxref=NCBI_GP:WJG91557.1;Name=WJG91557.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=PUW35_12515;product=cysteine synthase A;protein_id=WJG91557.1;transl_table=11 CP118132.1 Genbank gene 2534019 2534276 . + . ID=gene-PUW35_12520;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=PUW35_12520 CP118132.1 Protein Homology CDS 2534019 2534276 . + 0 ID=cds-WJG91558.1;Parent=gene-PUW35_12520;Dbxref=NCBI_GP:WJG91558.1;Name=WJG91558.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=PUW35_12520;product=phosphocarrier protein Hpr;protein_id=WJG91558.1;transl_table=11 CP118132.1 Genbank gene 2534325 2536052 . + . ID=gene-PUW35_12525;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=PUW35_12525 CP118132.1 Protein Homology CDS 2534325 2536052 . + 0 ID=cds-WJG91559.1;Parent=gene-PUW35_12525;Dbxref=NCBI_GP:WJG91559.1;Name=WJG91559.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=PUW35_12525;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WJG91559.1;transl_table=11 CP118132.1 Genbank gene 2536093 2536602 . + . ID=gene-PUW35_12530;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=PUW35_12530 CP118132.1 Protein Homology CDS 2536093 2536602 . + 0 ID=cds-WJG91560.1;Parent=gene-PUW35_12530;Dbxref=NCBI_GP:WJG91560.1;Name=WJG91560.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=PUW35_12530;product=PTS glucose transporter subunit IIA;protein_id=WJG91560.1;transl_table=11 CP118132.1 Genbank gene 2536766 2537005 . - . ID=gene-PUW35_12535;Name=PUW35_12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12535 CP118132.1 Protein Homology CDS 2536766 2537005 . - 0 ID=cds-WJG91561.1;Parent=gene-PUW35_12535;Dbxref=NCBI_GP:WJG91561.1;Name=WJG91561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=PUW35_12535;product=cytoplasmic protein;protein_id=WJG91561.1;transl_table=11 CP118132.1 Genbank gene 2537002 2537868 . - . ID=gene-PUW35_12540;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=PUW35_12540 CP118132.1 Protein Homology CDS 2537002 2537868 . - 0 ID=cds-WJG91562.1;Parent=gene-PUW35_12540;Dbxref=NCBI_GP:WJG91562.1;Name=WJG91562.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=PUW35_12540;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WJG91562.1;transl_table=11 CP118132.1 Genbank gene 2537951 2539243 . + . ID=gene-PUW35_12545;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=PUW35_12545 CP118132.1 Protein Homology CDS 2537951 2539243 . + 0 ID=cds-WJG91563.1;Parent=gene-PUW35_12545;Dbxref=NCBI_GP:WJG91563.1;Name=WJG91563.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=PUW35_12545;product=transcriptional regulator PtsJ;protein_id=WJG91563.1;transl_table=11 CP118132.1 Genbank gene 2539258 2539977 . + . ID=gene-PUW35_12550;Name=PUW35_12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12550 CP118132.1 Protein Homology CDS 2539258 2539977 . + 0 ID=cds-WJG91564.1;Parent=gene-PUW35_12550;Dbxref=NCBI_GP:WJG91564.1;Name=WJG91564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=PUW35_12550;product=GMP synthase;protein_id=WJG91564.1;transl_table=11 CP118132.1 Genbank gene 2540036 2540419 . + . ID=gene-PUW35_12555;Name=PUW35_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12555 CP118132.1 Protein Homology CDS 2540036 2540419 . + 0 ID=cds-WJG91565.1;Parent=gene-PUW35_12555;Dbxref=NCBI_GP:WJG91565.1;Name=WJG91565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710732.1;locus_tag=PUW35_12555;product=YfeK family protein;protein_id=WJG91565.1;transl_table=11 CP118132.1 Genbank gene 2540519 2541127 . - . ID=gene-PUW35_12560;Name=PUW35_12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12560 CP118132.1 Protein Homology CDS 2540519 2541127 . - 0 ID=cds-WJG91566.1;Parent=gene-PUW35_12560;Dbxref=NCBI_GP:WJG91566.1;Name=WJG91566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666526.1;locus_tag=PUW35_12560;product=tetratricopeptide repeat protein;protein_id=WJG91566.1;transl_table=11 CP118132.1 Genbank gene 2541379 2542290 . - . ID=gene-PUW35_12565;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=PUW35_12565 CP118132.1 Protein Homology CDS 2541379 2542290 . - 0 ID=cds-WJG91567.1;Parent=gene-PUW35_12565;Dbxref=NCBI_GP:WJG91567.1;Name=WJG91567.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=PUW35_12565;product=cysteine synthase CysM;protein_id=WJG91567.1;transl_table=11 CP118132.1 Genbank gene 2542358 2543455 . - . ID=gene-PUW35_12570;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=PUW35_12570 CP118132.1 Protein Homology CDS 2542358 2543455 . - 0 ID=cds-WJG91568.1;Parent=gene-PUW35_12570;Dbxref=NCBI_GP:WJG91568.1;Name=WJG91568.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=PUW35_12570;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WJG91568.1;transl_table=11 CP118132.1 Genbank gene 2543445 2544320 . - . ID=gene-PUW35_12575;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=PUW35_12575 CP118132.1 Protein Homology CDS 2543445 2544320 . - 0 ID=cds-WJG91569.1;Parent=gene-PUW35_12575;Dbxref=NCBI_GP:WJG91569.1;Name=WJG91569.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=PUW35_12575;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WJG91569.1;transl_table=11 CP118132.1 Genbank gene 2544320 2545153 . - . ID=gene-PUW35_12580;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=PUW35_12580 CP118132.1 Protein Homology CDS 2544320 2545153 . - 0 ID=cds-WJG91570.1;Parent=gene-PUW35_12580;Dbxref=NCBI_GP:WJG91570.1;Name=WJG91570.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=PUW35_12580;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WJG91570.1;transl_table=11 CP118132.1 Genbank gene 2545153 2546169 . - . ID=gene-PUW35_12585;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=PUW35_12585 CP118132.1 Protein Homology CDS 2545153 2546169 . - 0 ID=cds-WJG91571.1;Parent=gene-PUW35_12585;Dbxref=NCBI_GP:WJG91571.1;Name=WJG91571.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=PUW35_12585;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WJG91571.1;transl_table=11 CP118132.1 Genbank gene 2546327 2547124 . - . ID=gene-PUW35_12590;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=PUW35_12590 CP118132.1 Protein Homology CDS 2546327 2547124 . - 0 ID=cds-WJG91572.1;Parent=gene-PUW35_12590;Dbxref=NCBI_GP:WJG91572.1;Name=WJG91572.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517461.1;locus_tag=PUW35_12590;product=SDR family oxidoreductase UcpA;protein_id=WJG91572.1;transl_table=11 CP118132.1 Genbank gene 2547361 2548260 . - . ID=gene-PUW35_12595;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=PUW35_12595 CP118132.1 Protein Homology CDS 2547361 2548260 . - 0 ID=cds-WJG91573.1;Parent=gene-PUW35_12595;Dbxref=NCBI_GP:WJG91573.1;Name=WJG91573.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=PUW35_12595;product=porphyrinogen peroxidase;protein_id=WJG91573.1;transl_table=11 CP118132.1 Genbank pseudogene 2548355 2548929 . - . ID=gene-PUW35_12600;Name=PUW35_12600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12600;pseudo=true CP118132.1 Protein Homology CDS 2548355 2548929 . - 0 ID=cds-PUW35_12600;Parent=gene-PUW35_12600;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=PUW35_12600;product=RpoE-regulated lipoprotein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2548991 2549438 . - . ID=gene-PUW35_12605;Name=PUW35_12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12605;pseudo=true CP118132.1 Protein Homology CDS 2548991 2549438 . - 0 ID=cds-PUW35_12605;Parent=gene-PUW35_12605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=PUW35_12605;product=DUF2919 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2549425 2549850 . - . ID=gene-PUW35_12610;Name=PUW35_12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12610 CP118132.1 Protein Homology CDS 2549425 2549850 . - 0 ID=cds-WJG91574.1;Parent=gene-PUW35_12610;Dbxref=NCBI_GP:WJG91574.1;Name=WJG91574.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=PUW35_12610;product=GNAT family acetyltransferase;protein_id=WJG91574.1;transl_table=11 CP118132.1 Genbank gene 2550063 2550932 . + . ID=gene-PUW35_12615;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=PUW35_12615 CP118132.1 Protein Homology CDS 2550063 2550932 . + 0 ID=cds-WJG91575.1;Parent=gene-PUW35_12615;Dbxref=NCBI_GP:WJG91575.1;Name=WJG91575.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=PUW35_12615;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WJG91575.1;transl_table=11 CP118132.1 Genbank gene 2550935 2551834 . + . ID=gene-PUW35_12620;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=PUW35_12620 CP118132.1 Protein Homology CDS 2550935 2551834 . + 0 ID=cds-WJG91576.1;Parent=gene-PUW35_12620;Dbxref=NCBI_GP:WJG91576.1;Name=WJG91576.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=PUW35_12620;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WJG91576.1;transl_table=11 CP118132.1 Genbank gene 2551855 2552184 . + . ID=gene-PUW35_12625;Name=PUW35_12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12625 CP118132.1 Protein Homology CDS 2551855 2552184 . + 0 ID=cds-WJG91577.1;Parent=gene-PUW35_12625;Dbxref=NCBI_GP:WJG91577.1;Name=WJG91577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=PUW35_12625;product=hypothetical protein;protein_id=WJG91577.1;transl_table=11 CP118132.1 Genbank pseudogene 2552239 2552466 . + . ID=gene-PUW35_12630;Name=PUW35_12630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12630;pseudo=true CP118132.1 Protein Homology CDS 2552239 2552466 . + 0 ID=cds-PUW35_12630;Parent=gene-PUW35_12630;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=PUW35_12630;product=DUF1963 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2552633 2553685 . - . ID=gene-PUW35_12635;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=PUW35_12635 CP118132.1 Protein Homology CDS 2552633 2553685 . - 0 ID=cds-WJG91578.1;Parent=gene-PUW35_12635;Dbxref=NCBI_GP:WJG91578.1;Name=WJG91578.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=PUW35_12635;product=HTH-type transcriptional regulator EutR;protein_id=WJG91578.1;transl_table=11 CP118132.1 Genbank gene 2553733 2554227 . - . ID=gene-PUW35_12640;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=PUW35_12640 CP118132.1 Protein Homology CDS 2553733 2554227 . - 0 ID=cds-WJG91579.1;Parent=gene-PUW35_12640;Dbxref=NCBI_GP:WJG91579.1;Name=WJG91579.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=PUW35_12640;product=ethanolamine utilization microcompartment protein EutK;protein_id=WJG91579.1;transl_table=11 CP118132.1 Genbank gene 2554240 2554899 . - . ID=gene-PUW35_12645;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=PUW35_12645 CP118132.1 Protein Homology CDS 2554240 2554899 . - 0 ID=cds-WJG91580.1;Parent=gene-PUW35_12645;Dbxref=NCBI_GP:WJG91580.1;Name=WJG91580.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=PUW35_12645;product=ethanolamine utilization microcompartment protein EutL;protein_id=WJG91580.1;transl_table=11 CP118132.1 Genbank pseudogene 2554909 2555804 . - . ID=gene-PUW35_12650;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=pseudogene;locus_tag=PUW35_12650;pseudo=true CP118132.1 Protein Homology CDS 2554909 2555804 . - 0 ID=cds-PUW35_12650;Parent=gene-PUW35_12650;Note=frameshifted;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=PUW35_12650;product=ethanolamine ammonia-lyase subunit EutC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2555823 2557184 . - . ID=gene-PUW35_12655;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=PUW35_12655 CP118132.1 Protein Homology CDS 2555823 2557184 . - 0 ID=cds-WJG91581.1;Parent=gene-PUW35_12655;Dbxref=NCBI_GP:WJG91581.1;Name=WJG91581.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=PUW35_12655;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WJG91581.1;transl_table=11 CP118132.1 Genbank gene 2557196 2558599 . - . ID=gene-PUW35_12660;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=PUW35_12660 CP118132.1 Protein Homology CDS 2557196 2558599 . - 0 ID=cds-WJG91582.1;Parent=gene-PUW35_12660;Dbxref=NCBI_GP:WJG91582.1;Name=WJG91582.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=PUW35_12660;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WJG91582.1;transl_table=11 CP118132.1 Genbank gene 2558596 2559822 . - . ID=gene-PUW35_12665;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=PUW35_12665 CP118132.1 Protein Homology CDS 2558596 2559822 . - 0 ID=cds-WJG91583.1;Parent=gene-PUW35_12665;Dbxref=NCBI_GP:WJG91583.1;Name=WJG91583.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=PUW35_12665;product=ethanolamine utilization protein EutH;protein_id=WJG91583.1;transl_table=11 CP118132.1 Genbank gene 2559942 2561129 . - . ID=gene-PUW35_12670;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=PUW35_12670 CP118132.1 Protein Homology CDS 2559942 2561129 . - 0 ID=cds-WJG91584.1;Parent=gene-PUW35_12670;Dbxref=NCBI_GP:WJG91584.1;Name=WJG91584.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=PUW35_12670;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WJG91584.1;transl_table=11 CP118132.1 Genbank gene 2561119 2561958 . - . ID=gene-PUW35_12675;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=PUW35_12675 CP118132.1 Protein Homology CDS 2561119 2561958 . - 0 ID=cds-WJG91585.1;Parent=gene-PUW35_12675;Dbxref=NCBI_GP:WJG91585.1;Name=WJG91585.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=PUW35_12675;product=ethanolamine utilization protein EutJ;protein_id=WJG91585.1;transl_table=11 CP118132.1 Genbank gene 2561969 2563372 . - . ID=gene-PUW35_12680;Name=PUW35_12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12680 CP118132.1 Protein Homology CDS 2561969 2563372 . - 0 ID=cds-WJG91586.1;Parent=gene-PUW35_12680;Dbxref=NCBI_GP:WJG91586.1;Name=WJG91586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=PUW35_12680;product=aldehyde dehydrogenase EutE;protein_id=WJG91586.1;transl_table=11 CP118132.1 Genbank gene 2563384 2563671 . - . ID=gene-PUW35_12685;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=PUW35_12685 CP118132.1 Protein Homology CDS 2563384 2563671 . - 0 ID=cds-WJG91587.1;Parent=gene-PUW35_12685;Dbxref=NCBI_GP:WJG91587.1;Name=WJG91587.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=PUW35_12685;product=ethanolamine utilization microcompartment protein EutN;protein_id=WJG91587.1;transl_table=11 CP118132.1 Genbank gene 2563784 2564074 . - . ID=gene-PUW35_12690;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=PUW35_12690 CP118132.1 Protein Homology CDS 2563784 2564074 . - 0 ID=cds-WJG91588.1;Parent=gene-PUW35_12690;Dbxref=NCBI_GP:WJG91588.1;Name=WJG91588.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=PUW35_12690;product=ethanolamine utilization microcompartment protein EutM;protein_id=WJG91588.1;transl_table=11 CP118132.1 Genbank gene 2564115 2565131 . - . ID=gene-PUW35_12695;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PUW35_12695 CP118132.1 Protein Homology CDS 2564115 2565131 . - 0 ID=cds-WJG91589.1;Parent=gene-PUW35_12695;Dbxref=NCBI_GP:WJG91589.1;Name=WJG91589.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=PUW35_12695;product=phosphate acetyltransferase;protein_id=WJG91589.1;transl_table=11 CP118132.1 Genbank gene 2565128 2565931 . - . ID=gene-PUW35_12700;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=PUW35_12700 CP118132.1 Protein Homology CDS 2565128 2565931 . - 0 ID=cds-WJG91590.1;Parent=gene-PUW35_12700;Dbxref=NCBI_GP:WJG91590.1;Name=WJG91590.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=PUW35_12700;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WJG91590.1;transl_table=11 CP118132.1 Genbank gene 2565928 2566617 . - . ID=gene-PUW35_12705;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=PUW35_12705 CP118132.1 Protein Homology CDS 2565928 2566617 . - 0 ID=cds-WJG91591.1;Parent=gene-PUW35_12705;Dbxref=NCBI_GP:WJG91591.1;Name=WJG91591.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=PUW35_12705;product=ethanolamine utilization acetate kinase EutQ;protein_id=WJG91591.1;transl_table=11 CP118132.1 Genbank gene 2566595 2567074 . - . ID=gene-PUW35_12710;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=PUW35_12710 CP118132.1 Protein Homology CDS 2566595 2567074 . - 0 ID=cds-WJG91592.1;Parent=gene-PUW35_12710;Dbxref=NCBI_GP:WJG91592.1;Name=WJG91592.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=PUW35_12710;product=ethanolamine utilization acetate kinase EutP;protein_id=WJG91592.1;transl_table=11 CP118132.1 Genbank gene 2567087 2567422 . - . ID=gene-PUW35_12715;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=PUW35_12715 CP118132.1 Protein Homology CDS 2567087 2567422 . - 0 ID=cds-WJG91593.1;Parent=gene-PUW35_12715;Dbxref=NCBI_GP:WJG91593.1;Name=WJG91593.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=PUW35_12715;product=ethanolamine utilization microcompartment protein EutS;protein_id=WJG91593.1;transl_table=11 CP118132.1 Genbank pseudogene 2567839 2570117 . - . ID=gene-PUW35_12720;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=pseudogene;locus_tag=PUW35_12720;pseudo=true CP118132.1 Protein Homology CDS 2567839 2570117 . - 0 ID=cds-PUW35_12720;Parent=gene-PUW35_12720;Note=frameshifted;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=PUW35_12720;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2570389 2571339 . + . ID=gene-PUW35_12725;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PUW35_12725 CP118132.1 Protein Homology CDS 2570389 2571339 . + 0 ID=cds-WJG91594.1;Parent=gene-PUW35_12725;Dbxref=NCBI_GP:WJG91594.1;Name=WJG91594.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=PUW35_12725;product=transaldolase;protein_id=WJG91594.1;transl_table=11 CP118132.1 Genbank pseudogene 2571359 2573358 . + . ID=gene-PUW35_12730;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=pseudogene;locus_tag=PUW35_12730;pseudo=true CP118132.1 Protein Homology CDS 2571359 2573358 . + 0 ID=cds-PUW35_12730;Parent=gene-PUW35_12730;Note=frameshifted;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=PUW35_12730;product=transketolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2573421 2573651 . - . ID=gene-PUW35_12735;Name=PUW35_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12735 CP118132.1 Protein Homology CDS 2573421 2573651 . - 0 ID=cds-WJG95098.1;Parent=gene-PUW35_12735;Dbxref=NCBI_GP:WJG95098.1;Name=WJG95098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=PUW35_12735;product=hypothetical protein;protein_id=WJG95098.1;transl_table=11 CP118132.1 Genbank gene 2573779 2574822 . - . ID=gene-PUW35_12740;Name=PUW35_12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12740 CP118132.1 Protein Homology CDS 2573779 2574822 . - 0 ID=cds-WJG91595.1;Parent=gene-PUW35_12740;Dbxref=NCBI_GP:WJG91595.1;Name=WJG91595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=PUW35_12740;product=DUF1176 domain-containing protein;protein_id=WJG91595.1;transl_table=11 CP118132.1 Genbank gene 2574946 2575521 . - . ID=gene-PUW35_12745;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=PUW35_12745 CP118132.1 Protein Homology CDS 2574946 2575521 . - 0 ID=cds-WJG91596.1;Parent=gene-PUW35_12745;Dbxref=NCBI_GP:WJG91596.1;Name=WJG91596.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=PUW35_12745;product=GDP-mannose pyrophosphatase NudK;protein_id=WJG91596.1;transl_table=11 CP118132.1 Genbank gene 2575725 2577023 . + . ID=gene-PUW35_12750;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=PUW35_12750 CP118132.1 Protein Homology CDS 2575725 2577023 . + 0 ID=cds-WJG91597.1;Parent=gene-PUW35_12750;Dbxref=NCBI_GP:WJG91597.1;Name=WJG91597.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=PUW35_12750;product=penicillin binding protein PBP4B;protein_id=WJG91597.1;transl_table=11 CP118132.1 Genbank pseudogene 2577472 2579431 . - . ID=gene-PUW35_12755;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=pseudogene;locus_tag=PUW35_12755;pseudo=true CP118132.1 Protein Homology CDS 2577472 2579431 . - 0 ID=cds-PUW35_12755;Parent=gene-PUW35_12755;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=PUW35_12755;product=formate-dependent uric acid utilization protein AegA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2579617 2581317 . + . ID=gene-PUW35_12760;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=PUW35_12760 CP118132.1 Protein Homology CDS 2579617 2581317 . + 0 ID=cds-WJG91598.1;Parent=gene-PUW35_12760;Dbxref=NCBI_GP:WJG91598.1;Name=WJG91598.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=PUW35_12760;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WJG91598.1;transl_table=11 CP118132.1 Genbank pseudogene 2581502 2584614 . + . ID=gene-PUW35_12765;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=pseudogene;locus_tag=PUW35_12765;pseudo=true CP118132.1 Protein Homology CDS 2581502 2584614 . + 0 ID=cds-PUW35_12765;Parent=gene-PUW35_12765;Note=frameshifted%3B internal stop;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=PUW35_12765;product=multidrug efflux RND transporter permease AcrD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2584716 2584775 . - . ID=gene-PUW35_12770;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=PUW35_12770 CP118132.1 Protein Homology CDS 2584716 2584775 . - 0 ID=cds-WJG95099.1;Parent=gene-PUW35_12770;Dbxref=NCBI_GP:WJG95099.1;Name=WJG95099.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=PUW35_12770;product=protein YpfM;protein_id=WJG95099.1;transl_table=11 CP118132.1 Genbank gene 2585188 2585544 . + . ID=gene-PUW35_12775;Name=PUW35_12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12775 CP118132.1 Protein Homology CDS 2585188 2585544 . + 0 ID=cds-WJG91599.1;Parent=gene-PUW35_12775;Dbxref=NCBI_GP:WJG91599.1;Name=WJG91599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=PUW35_12775;product=ArsC family reductase;protein_id=WJG91599.1;transl_table=11 CP118132.1 Genbank gene 2585548 2586699 . + . ID=gene-PUW35_12780;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=PUW35_12780 CP118132.1 Protein Homology CDS 2585548 2586699 . + 0 ID=cds-WJG91600.1;Parent=gene-PUW35_12780;Dbxref=NCBI_GP:WJG91600.1;Name=WJG91600.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=PUW35_12780;product=succinyl-diaminopimelate desuccinylase;protein_id=WJG91600.1;transl_table=11 CP118132.1 Genbank gene 2586702 2586902 . + . ID=gene-PUW35_12785;Name=PUW35_12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12785 CP118132.1 Protein Homology CDS 2586702 2586902 . + 0 ID=cds-WJG91601.1;Parent=gene-PUW35_12785;Dbxref=NCBI_GP:WJG91601.1;Name=WJG91601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=PUW35_12785;product=YpfN family protein;protein_id=WJG91601.1;transl_table=11 CP118132.1 Genbank gene 2586929 2588947 . - . ID=gene-PUW35_12790;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=PUW35_12790 CP118132.1 Protein Homology CDS 2586929 2588947 . - 0 ID=cds-WJG91602.1;Parent=gene-PUW35_12790;Dbxref=NCBI_GP:WJG91602.1;Name=WJG91602.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=PUW35_12790;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WJG91602.1;transl_table=11 CP118132.1 Genbank gene 2588963 2589826 . - . ID=gene-PUW35_12795;Name=PUW35_12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12795 CP118132.1 Protein Homology CDS 2588963 2589826 . - 0 ID=cds-WJG91603.1;Parent=gene-PUW35_12795;Dbxref=NCBI_GP:WJG91603.1;Name=WJG91603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=PUW35_12795;product=neutral zinc metallopeptidase;protein_id=WJG91603.1;transl_table=11 CP118132.1 Genbank gene 2589957 2590670 . - . ID=gene-PUW35_12800;Name=PUW35_12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12800 CP118132.1 Protein Homology CDS 2589957 2590670 . - 0 ID=cds-WJG91604.1;Parent=gene-PUW35_12800;Dbxref=NCBI_GP:WJG91604.1;Name=WJG91604.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=PUW35_12800;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WJG91604.1;transl_table=11 CP118132.1 Genbank gene 2590845 2591879 . - . ID=gene-PUW35_12805;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=PUW35_12805 CP118132.1 Protein Homology CDS 2590845 2591879 . - 0 ID=cds-WJG91605.1;Parent=gene-PUW35_12805;Dbxref=NCBI_GP:WJG91605.1;Name=WJG91605.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=PUW35_12805;product=outer membrane protein assembly factor BamC;protein_id=WJG91605.1;transl_table=11 CP118132.1 Genbank gene 2591896 2592774 . - . ID=gene-PUW35_12810;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=PUW35_12810 CP118132.1 Protein Homology CDS 2591896 2592774 . - 0 ID=cds-WJG91606.1;Parent=gene-PUW35_12810;Dbxref=NCBI_GP:WJG91606.1;Name=WJG91606.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=PUW35_12810;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WJG91606.1;transl_table=11 CP118132.1 Genbank gene 2592920 2593492 . + . ID=gene-PUW35_12815;Name=PUW35_12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12815 CP118132.1 Protein Homology CDS 2592920 2593492 . + 0 ID=cds-WJG91607.1;Parent=gene-PUW35_12815;Dbxref=NCBI_GP:WJG91607.1;Name=WJG91607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=PUW35_12815;product=glycine cleavage system transcriptional repressor;protein_id=WJG91607.1;transl_table=11 CP118132.1 Genbank gene 2593492 2593962 . + . ID=gene-PUW35_12820;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=PUW35_12820 CP118132.1 Protein Homology CDS 2593492 2593962 . + 0 ID=cds-WJG91608.1;Parent=gene-PUW35_12820;Dbxref=NCBI_GP:WJG91608.1;Name=WJG91608.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=PUW35_12820;product=thioredoxin-dependent thiol peroxidase;protein_id=WJG91608.1;transl_table=11 CP118132.1 Genbank gene 2594009 2595148 . - . ID=gene-PUW35_12825;Name=PUW35_12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12825 CP118132.1 Protein Homology CDS 2594009 2595148 . - 0 ID=cds-WJG91609.1;Parent=gene-PUW35_12825;Dbxref=NCBI_GP:WJG91609.1;Name=WJG91609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=PUW35_12825;product=glycerate kinase;protein_id=WJG91609.1;transl_table=11 CP118132.1 Genbank gene 2595154 2596422 . - . ID=gene-PUW35_12830;Name=PUW35_12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12830 CP118132.1 Protein Homology CDS 2595154 2596422 . - 0 ID=cds-WJG91610.1;Parent=gene-PUW35_12830;Dbxref=NCBI_GP:WJG91610.1;Name=WJG91610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=PUW35_12830;product=GntP family permease;protein_id=WJG91610.1;transl_table=11 CP118132.1 Genbank gene 2596490 2597677 . - . ID=gene-PUW35_12835;Name=PUW35_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12835 CP118132.1 Protein Homology CDS 2596490 2597677 . - 0 ID=cds-WJG91611.1;Parent=gene-PUW35_12835;Dbxref=NCBI_GP:WJG91611.1;Name=WJG91611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=PUW35_12835;product=sugar diacid recognition domain-containing protein;protein_id=WJG91611.1;transl_table=11 CP118132.1 Genbank pseudogene 2597953 2599019 . - . ID=gene-PUW35_12840;Name=PUW35_12840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12840;pseudo=true CP118132.1 Protein Homology CDS 2597953 2599019 . - 0 ID=cds-PUW35_12840;Parent=gene-PUW35_12840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=PUW35_12840;product=AI-2E family transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2599227 2600690 . + . ID=gene-PUW35_12845;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=PUW35_12845 CP118132.1 Protein Homology CDS 2599227 2600690 . + 0 ID=cds-WJG91612.1;Parent=gene-PUW35_12845;Dbxref=NCBI_GP:WJG91612.1;Name=WJG91612.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=PUW35_12845;product=beta-barrel assembly-enhancing protease;protein_id=WJG91612.1;transl_table=11 CP118132.1 Genbank gene 2600730 2601089 . + . ID=gene-PUW35_12850;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PUW35_12850 CP118132.1 Protein Homology CDS 2600730 2601089 . + 0 ID=cds-WJG91613.1;Parent=gene-PUW35_12850;Dbxref=NCBI_GP:WJG91613.1;Name=WJG91613.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=PUW35_12850;product=arsenate reductase (glutaredoxin);protein_id=WJG91613.1;transl_table=11 CP118132.1 Genbank gene 2601116 2601817 . - . ID=gene-PUW35_12855;Name=PUW35_12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12855 CP118132.1 Protein Homology CDS 2601116 2601817 . - 0 ID=cds-WJG95100.1;Parent=gene-PUW35_12855;Dbxref=NCBI_GP:WJG95100.1;Name=WJG95100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=PUW35_12855;product=DnaA inactivator Hda;protein_id=WJG95100.1;transl_table=11 CP118132.1 Genbank gene 2601912 2603201 . - . ID=gene-PUW35_12860;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=PUW35_12860 CP118132.1 Protein Homology CDS 2601912 2603201 . - 0 ID=cds-WJG91614.1;Parent=gene-PUW35_12860;Dbxref=NCBI_GP:WJG91614.1;Name=WJG91614.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=PUW35_12860;product=uracil permease;protein_id=WJG91614.1;transl_table=11 CP118132.1 Genbank gene 2603288 2603914 . - . ID=gene-PUW35_12865;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=PUW35_12865 CP118132.1 Protein Homology CDS 2603288 2603914 . - 0 ID=cds-WJG91615.1;Parent=gene-PUW35_12865;Dbxref=NCBI_GP:WJG91615.1;Name=WJG91615.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=PUW35_12865;product=uracil phosphoribosyltransferase;protein_id=WJG91615.1;transl_table=11 CP118132.1 Genbank gene 2604326 2605363 . + . ID=gene-PUW35_12870;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=PUW35_12870 CP118132.1 Protein Homology CDS 2604326 2605363 . + 0 ID=cds-WJG91616.1;Parent=gene-PUW35_12870;Dbxref=NCBI_GP:WJG91616.1;Name=WJG91616.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=PUW35_12870;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WJG91616.1;transl_table=11 CP118132.1 Genbank gene 2605363 2606001 . + . ID=gene-PUW35_12875;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=PUW35_12875 CP118132.1 Protein Homology CDS 2605363 2606001 . + 0 ID=cds-WJG91617.1;Parent=gene-PUW35_12875;Dbxref=NCBI_GP:WJG91617.1;Name=WJG91617.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=PUW35_12875;product=phosphoribosylglycinamide formyltransferase;protein_id=WJG91617.1;transl_table=11 CP118132.1 Genbank gene 2606190 2608256 . + . ID=gene-PUW35_12880;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=PUW35_12880 CP118132.1 Protein Homology CDS 2606190 2608256 . + 0 ID=cds-WJG91618.1;Parent=gene-PUW35_12880;Dbxref=NCBI_GP:WJG91618.1;Name=WJG91618.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=PUW35_12880;product=polyphosphate kinase 1;protein_id=WJG91618.1;transl_table=11 CP118132.1 Genbank gene 2608261 2609802 . + . ID=gene-PUW35_12885;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=PUW35_12885 CP118132.1 Protein Homology CDS 2608261 2609802 . + 0 ID=cds-WJG95101.1;Parent=gene-PUW35_12885;Dbxref=NCBI_GP:WJG95101.1;Name=WJG95101.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=PUW35_12885;product=exopolyphosphatase;protein_id=WJG95101.1;transl_table=11 CP118132.1 Genbank pseudogene 2609838 2612050 . - . ID=gene-PUW35_12890;Name=PUW35_12890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12890;pseudo=true CP118132.1 Protein Homology CDS 2609838 2612050 . - 0 ID=cds-PUW35_12890;Parent=gene-PUW35_12890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=PUW35_12890;product=sensor domain-containing phosphodiesterase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2612147 2612284 . - . ID=gene-PUW35_12895;Name=PUW35_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12895 CP118132.1 Protein Homology CDS 2612147 2612284 . - 0 ID=cds-WJG91619.1;Parent=gene-PUW35_12895;Dbxref=NCBI_GP:WJG91619.1;Name=WJG91619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=PUW35_12895;product=hypothetical protein;protein_id=WJG91619.1;transl_table=11 CP118132.1 Genbank gene 2612463 2612654 . + . ID=gene-PUW35_12900;Name=PUW35_12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12900 CP118132.1 Protein Homology CDS 2612463 2612654 . + 0 ID=cds-WJG91620.1;Parent=gene-PUW35_12900;Dbxref=NCBI_GP:WJG91620.1;Name=WJG91620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=PUW35_12900;product=YfgG family protein;protein_id=WJG91620.1;transl_table=11 CP118132.1 Genbank pseudogene 2612732 2612875 . - . ID=gene-PUW35_12905;Name=PUW35_12905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12905;pseudo=true CP118132.1 Protein Homology CDS 2612732 2612875 . - 0 ID=cds-PUW35_12905;Parent=gene-PUW35_12905;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=PUW35_12905;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2613348 2613677 . + . ID=gene-PUW35_12910;Name=PUW35_12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12910 CP118132.1 Protein Homology CDS 2613348 2613677 . + 0 ID=cds-WJG91621.1;Parent=gene-PUW35_12910;Dbxref=NCBI_GP:WJG91621.1;Name=WJG91621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=PUW35_12910;product=DUF1493 family protein;protein_id=WJG91621.1;transl_table=11 CP118132.1 Genbank pseudogene 2613757 2614065 . - . ID=gene-PUW35_12915;Name=PUW35_12915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12915;pseudo=true CP118132.1 Protein Homology CDS 2613757 2614065 . - 0 ID=cds-PUW35_12915;Parent=gene-PUW35_12915;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611898.1;locus_tag=PUW35_12915;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2614207 2615784 . - . ID=gene-PUW35_12920;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=PUW35_12920 CP118132.1 Protein Homology CDS 2614207 2615784 . - 0 ID=cds-WJG91622.1;Parent=gene-PUW35_12920;Dbxref=NCBI_GP:WJG91622.1;Name=WJG91622.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=PUW35_12920;product=glutamine-hydrolyzing GMP synthase;protein_id=WJG91622.1;transl_table=11 CP118132.1 Genbank gene 2615854 2617320 . - . ID=gene-PUW35_12925;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=PUW35_12925 CP118132.1 Protein Homology CDS 2615854 2617320 . - 0 ID=cds-WJG91623.1;Parent=gene-PUW35_12925;Dbxref=NCBI_GP:WJG91623.1;Name=WJG91623.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=PUW35_12925;product=IMP dehydrogenase;protein_id=WJG91623.1;transl_table=11 CP118132.1 Genbank pseudogene 2617481 2618829 . + . ID=gene-PUW35_12930;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=pseudogene;locus_tag=PUW35_12930;pseudo=true CP118132.1 Protein Homology CDS 2617481 2618829 . + 0 ID=cds-PUW35_12930;Parent=gene-PUW35_12930;Note=frameshifted;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=PUW35_12930;product=exodeoxyribonuclease VII large subunit;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2618991 2625087 . - . ID=gene-PUW35_12935;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=pseudogene;locus_tag=PUW35_12935;pseudo=true CP118132.1 Protein Homology CDS 2618991 2625087 . - 0 ID=cds-PUW35_12935;Parent=gene-PUW35_12935;Note=frameshifted;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=PUW35_12935;product=fibronectin-binding autotransporter adhesin ShdA;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2625647 2625733 . - . ID=gene-PUW35_12940;Name=PUW35_12940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_12940;pseudo=true CP118132.1 Protein Homology CDS 2625647 2625733 . - 0 ID=cds-PUW35_12940;Parent=gene-PUW35_12940;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=PUW35_12940;product=IS1 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2625748 2633050 . - . ID=gene-PUW35_12945;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=pseudogene;locus_tag=PUW35_12945;pseudo=true CP118132.1 Protein Homology CDS 2625748 2633050 . - 0 ID=cds-PUW35_12945;Parent=gene-PUW35_12945;Note=frameshifted;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=PUW35_12945;product=DUF823/DUF824 repeat adhesin RatB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2633216 2638813 . - . ID=gene-PUW35_12950;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=PUW35_12950 CP118132.1 Protein Homology CDS 2633216 2638813 . - 0 ID=cds-WJG91624.1;Parent=gene-PUW35_12950;Dbxref=NCBI_GP:WJG91624.1;Name=WJG91624.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=PUW35_12950;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WJG91624.1;transl_table=11 CP118132.1 Genbank gene 2638931 2639890 . - . ID=gene-PUW35_12955;Name=PUW35_12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12955 CP118132.1 Protein Homology CDS 2638931 2639890 . - 0 ID=cds-WJG91625.1;Parent=gene-PUW35_12955;Dbxref=NCBI_GP:WJG91625.1;Name=WJG91625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=PUW35_12955;product=SinI family autotransporter-associated protein;protein_id=WJG91625.1;transl_table=11 CP118132.1 Genbank pseudogene 2639948 2642141 . - . ID=gene-PUW35_12960;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=pseudogene;locus_tag=PUW35_12960;pseudo=true CP118132.1 Protein Homology CDS 2639948 2642141 . - 0 ID=cds-PUW35_12960;Parent=gene-PUW35_12960;Note=frameshifted;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=PUW35_12960;product=intimin-like inverse autotransporter SinH;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2642487 2642708 . - . ID=gene-PUW35_12965;Name=PUW35_12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12965 CP118132.1 Protein Homology CDS 2642487 2642708 . - 0 ID=cds-WJG91626.1;Parent=gene-PUW35_12965;Dbxref=NCBI_GP:WJG91626.1;Name=WJG91626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=PUW35_12965;product=zinc ribbon domain-containing protein;protein_id=WJG91626.1;transl_table=11 CP118132.1 Genbank gene 2642797 2644269 . - . ID=gene-PUW35_12970;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=PUW35_12970 CP118132.1 Protein Homology CDS 2642797 2644269 . - 0 ID=cds-WJG91627.1;Parent=gene-PUW35_12970;Dbxref=NCBI_GP:WJG91627.1;Name=WJG91627.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=PUW35_12970;product=ribosome biogenesis GTPase Der;protein_id=WJG91627.1;transl_table=11 CP118132.1 Genbank gene 2644388 2645566 . - . ID=gene-PUW35_12975;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=PUW35_12975 CP118132.1 Protein Homology CDS 2644388 2645566 . - 0 ID=cds-WJG91628.1;Parent=gene-PUW35_12975;Dbxref=NCBI_GP:WJG91628.1;Name=WJG91628.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=PUW35_12975;product=outer membrane protein assembly factor BamB;protein_id=WJG91628.1;transl_table=11 CP118132.1 Genbank gene 2645577 2646197 . - . ID=gene-PUW35_12980;Name=PUW35_12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_12980 CP118132.1 Protein Homology CDS 2645577 2646197 . - 0 ID=cds-WJG91629.1;Parent=gene-PUW35_12980;Dbxref=NCBI_GP:WJG91629.1;Name=WJG91629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=PUW35_12980;product=YfgM family protein;protein_id=WJG91629.1;transl_table=11 CP118132.1 Genbank pseudogene 2646211 2647484 . - . ID=gene-PUW35_12985;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=pseudogene;locus_tag=PUW35_12985;pseudo=true CP118132.1 Protein Homology CDS 2646211 2647484 . - 0 ID=cds-PUW35_12985;Parent=gene-PUW35_12985;Note=frameshifted;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=PUW35_12985;product=histidine--tRNA ligase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2647595 2648713 . - . ID=gene-PUW35_12990;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=PUW35_12990 CP118132.1 Protein Homology CDS 2647595 2648713 . - 0 ID=cds-WJG91630.1;Parent=gene-PUW35_12990;Dbxref=NCBI_GP:WJG91630.1;Name=WJG91630.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=PUW35_12990;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WJG91630.1;transl_table=11 CP118132.1 Genbank gene 2648740 2649744 . - . ID=gene-PUW35_12995;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=PUW35_12995 CP118132.1 Protein Homology CDS 2648740 2649744 . - 0 ID=cds-WJG91631.1;Parent=gene-PUW35_12995;Dbxref=NCBI_GP:WJG91631.1;Name=WJG91631.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=PUW35_12995;product=cytoskeleton protein RodZ;protein_id=WJG91631.1;transl_table=11 CP118132.1 Genbank pseudogene 2650036 2651201 . - . ID=gene-PUW35_13000;Name=PUW35_13000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13000;pseudo=true CP118132.1 Protein Homology CDS 2650036 2651201 . - 0 ID=cds-PUW35_13000;Parent=gene-PUW35_13000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=PUW35_13000;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2651408 2651839 . - . ID=gene-PUW35_13005;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=PUW35_13005 CP118132.1 Protein Homology CDS 2651408 2651839 . - 0 ID=cds-WJG91632.1;Parent=gene-PUW35_13005;Dbxref=NCBI_GP:WJG91632.1;Name=WJG91632.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=PUW35_13005;product=nucleoside-diphosphate kinase;protein_id=WJG91632.1;transl_table=11 CP118132.1 Genbank gene 2651960 2652823 . - . ID=gene-PUW35_13010;Name=PUW35_13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13010 CP118132.1 Protein Homology CDS 2651960 2652823 . - 0 ID=cds-WJG91633.1;Parent=gene-PUW35_13010;Dbxref=NCBI_GP:WJG91633.1;Name=WJG91633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=PUW35_13010;product=4Fe-4S binding protein;protein_id=WJG91633.1;transl_table=11 CP118132.1 Genbank pseudogene 2652823 2653631 . - . ID=gene-PUW35_13015;Name=PUW35_13015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13015;pseudo=true CP118132.1 Protein Homology CDS 2652823 2653631 . - 0 ID=cds-PUW35_13015;Parent=gene-PUW35_13015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=PUW35_13015;product=dimethyl sulfoxide reductase anchor subunit family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2653624 2654253 . - . ID=gene-PUW35_13020;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW35_13020 CP118132.1 Protein Homology CDS 2653624 2654253 . - 0 ID=cds-WJG91634.1;Parent=gene-PUW35_13020;Dbxref=NCBI_GP:WJG91634.1;Name=WJG91634.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=PUW35_13020;product=dimethylsulfoxide reductase subunit B;protein_id=WJG91634.1;transl_table=11 CP118132.1 Genbank gene 2654250 2656655 . - . ID=gene-PUW35_13025;Name=PUW35_13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13025 CP118132.1 Protein Homology CDS 2654250 2656655 . - 0 ID=cds-WJG91635.1;Parent=gene-PUW35_13025;Dbxref=NCBI_GP:WJG91635.1;Name=WJG91635.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=PUW35_13025;product=molybdopterin-dependent oxidoreductase;protein_id=WJG91635.1;transl_table=11 CP118132.1 Genbank gene 2656784 2659099 . - . ID=gene-PUW35_13030;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=PUW35_13030 CP118132.1 Protein Homology CDS 2656784 2659099 . - 0 ID=cds-WJG91636.1;Parent=gene-PUW35_13030;Dbxref=NCBI_GP:WJG91636.1;Name=WJG91636.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=PUW35_13030;product=peptidoglycan glycosyltransferase PbpC;protein_id=WJG91636.1;transl_table=11 CP118132.1 Genbank gene 2659100 2664034 . - . ID=gene-PUW35_13035;Name=PUW35_13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13035 CP118132.1 Protein Homology CDS 2659100 2664034 . - 0 ID=cds-WJG91637.1;Parent=gene-PUW35_13035;Dbxref=NCBI_GP:WJG91637.1;Name=WJG91637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=PUW35_13035;product=alpha-2-macroglobulin;protein_id=WJG91637.1;transl_table=11 CP118132.1 Genbank gene 2664243 2665085 . + . ID=gene-PUW35_13040;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PUW35_13040 CP118132.1 Protein Homology CDS 2664243 2665085 . + 0 ID=cds-WJG91638.1;Parent=gene-PUW35_13040;Dbxref=NCBI_GP:WJG91638.1;Name=WJG91638.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=PUW35_13040;product=3-mercaptopyruvate sulfurtransferase;protein_id=WJG91638.1;transl_table=11 CP118132.1 Genbank gene 2665065 2665289 . - . ID=gene-PUW35_13045;Name=PUW35_13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13045 CP118132.1 Protein Homology CDS 2665065 2665289 . - 0 ID=cds-WJG91639.1;Parent=gene-PUW35_13045;Dbxref=NCBI_GP:WJG91639.1;Name=WJG91639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=PUW35_13045;product=hypothetical protein;protein_id=WJG91639.1;transl_table=11 CP118132.1 Genbank gene 2665331 2665999 . + . ID=gene-PUW35_13050;Name=PUW35_13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13050 CP118132.1 Protein Homology CDS 2665331 2665999 . + 0 ID=cds-WJG91640.1;Parent=gene-PUW35_13050;Dbxref=NCBI_GP:WJG91640.1;Name=WJG91640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=PUW35_13050;product=DUF5066 family protein;protein_id=WJG91640.1;transl_table=11 CP118132.1 Genbank gene 2666414 2666530 . + . ID=gene-PUW35_13055;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=PUW35_13055 CP118132.1 Protein Homology CDS 2666414 2666530 . + 0 ID=cds-WJG91641.1;Parent=gene-PUW35_13055;Dbxref=NCBI_GP:WJG91641.1;Name=WJG91641.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=PUW35_13055;product=small toxic inner membrane protein TimP;protein_id=WJG91641.1;transl_table=11 CP118132.1 Genbank gene 2666567 2667343 . - . ID=gene-PUW35_13060;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=PUW35_13060 CP118132.1 Protein Homology CDS 2666567 2667343 . - 0 ID=cds-WJG91642.1;Parent=gene-PUW35_13060;Dbxref=NCBI_GP:WJG91642.1;Name=WJG91642.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=PUW35_13060;product=enhanced serine sensitivity protein SseB;protein_id=WJG91642.1;transl_table=11 CP118132.1 Genbank gene 2667453 2668736 . - . ID=gene-PUW35_13065;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=PUW35_13065 CP118132.1 Protein Homology CDS 2667453 2668736 . - 0 ID=cds-WJG91643.1;Parent=gene-PUW35_13065;Dbxref=NCBI_GP:WJG91643.1;Name=WJG91643.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=PUW35_13065;product=aminopeptidase PepB;protein_id=WJG91643.1;transl_table=11 CP118132.1 Genbank gene 2668914 2669114 . - . ID=gene-PUW35_13070;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=PUW35_13070 CP118132.1 Protein Homology CDS 2668914 2669114 . - 0 ID=cds-WJG91644.1;Parent=gene-PUW35_13070;Dbxref=NCBI_GP:WJG91644.1;Name=WJG91644.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=PUW35_13070;product=Fe-S cluster assembly protein IscX;protein_id=WJG91644.1;transl_table=11 CP118132.1 Genbank gene 2669126 2669461 . - . ID=gene-PUW35_13075;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=PUW35_13075 CP118132.1 Protein Homology CDS 2669126 2669461 . - 0 ID=cds-WJG91645.1;Parent=gene-PUW35_13075;Dbxref=NCBI_GP:WJG91645.1;Name=WJG91645.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=PUW35_13075;product=ISC system 2Fe-2S type ferredoxin;protein_id=WJG91645.1;transl_table=11 CP118132.1 Genbank gene 2669463 2671313 . - . ID=gene-PUW35_13080;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=PUW35_13080 CP118132.1 Protein Homology CDS 2669463 2671313 . - 0 ID=cds-WJG91646.1;Parent=gene-PUW35_13080;Dbxref=NCBI_GP:WJG91646.1;Name=WJG91646.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=PUW35_13080;product=Fe-S protein assembly chaperone HscA;protein_id=WJG91646.1;transl_table=11 CP118132.1 Genbank gene 2671326 2671841 . - . ID=gene-PUW35_13085;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=PUW35_13085 CP118132.1 Protein Homology CDS 2671326 2671841 . - 0 ID=cds-WJG91647.1;Parent=gene-PUW35_13085;Dbxref=NCBI_GP:WJG91647.1;Name=WJG91647.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=PUW35_13085;product=co-chaperone HscB;protein_id=WJG91647.1;transl_table=11 CP118132.1 Genbank gene 2672037 2672360 . - . ID=gene-PUW35_13090;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=PUW35_13090 CP118132.1 Protein Homology CDS 2672037 2672360 . - 0 ID=cds-WJG91648.1;Parent=gene-PUW35_13090;Dbxref=NCBI_GP:WJG91648.1;Name=WJG91648.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=PUW35_13090;product=iron-sulfur cluster assembly protein IscA;protein_id=WJG91648.1;transl_table=11 CP118132.1 Genbank gene 2672389 2672775 . - . ID=gene-PUW35_13095;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=PUW35_13095 CP118132.1 Protein Homology CDS 2672389 2672775 . - 0 ID=cds-WJG91649.1;Parent=gene-PUW35_13095;Dbxref=NCBI_GP:WJG91649.1;Name=WJG91649.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=PUW35_13095;product=Fe-S cluster assembly scaffold IscU;protein_id=WJG91649.1;transl_table=11 CP118132.1 Genbank gene 2672803 2674017 . - . ID=gene-PUW35_13100;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=PUW35_13100 CP118132.1 Protein Homology CDS 2672803 2674017 . - 0 ID=cds-WJG91650.1;Parent=gene-PUW35_13100;Dbxref=NCBI_GP:WJG91650.1;Name=WJG91650.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=PUW35_13100;product=cysteine desulfurase;protein_id=WJG91650.1;transl_table=11 CP118132.1 Genbank gene 2674198 2674692 . - . ID=gene-PUW35_13105;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=PUW35_13105 CP118132.1 Protein Homology CDS 2674198 2674692 . - 0 ID=cds-WJG91651.1;Parent=gene-PUW35_13105;Dbxref=NCBI_GP:WJG91651.1;Name=WJG91651.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=PUW35_13105;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WJG91651.1;transl_table=11 CP118132.1 Genbank gene 2674852 2675583 . - . ID=gene-PUW35_13110;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=PUW35_13110 CP118132.1 Protein Homology CDS 2674852 2675583 . - 0 ID=cds-WJG91652.1;Parent=gene-PUW35_13110;Dbxref=NCBI_GP:WJG91652.1;Name=WJG91652.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=PUW35_13110;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WJG91652.1;transl_table=11 CP118132.1 Genbank gene 2675702 2676505 . + . ID=gene-PUW35_13115;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=PUW35_13115 CP118132.1 Protein Homology CDS 2675702 2676505 . + 0 ID=cds-WJG91653.1;Parent=gene-PUW35_13115;Dbxref=NCBI_GP:WJG91653.1;Name=WJG91653.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=PUW35_13115;product=inositol-1-monophosphatase;protein_id=WJG91653.1;transl_table=11 CP118132.1 Genbank gene 2676650 2677528 . + . ID=gene-PUW35_13120;Name=PUW35_13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13120 CP118132.1 Protein Homology CDS 2676650 2677528 . + 0 ID=cds-WJG91654.1;Parent=gene-PUW35_13120;Dbxref=NCBI_GP:WJG91654.1;Name=WJG91654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=PUW35_13120;product=alpha/beta hydrolase;protein_id=WJG91654.1;transl_table=11 CP118132.1 Genbank gene 2677710 2678753 . + . ID=gene-PUW35_13125;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=PUW35_13125 CP118132.1 Protein Homology CDS 2677710 2678753 . + 0 ID=cds-WJG91655.1;Parent=gene-PUW35_13125;Dbxref=NCBI_GP:WJG91655.1;Name=WJG91655.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: protein motif:HMM:TIGR02910.1;locus_tag=PUW35_13125;product=anaerobic sulfite reductase subunit AsrA;protein_id=WJG91655.1;transl_table=11 CP118132.1 Genbank gene 2678757 2679575 . + . ID=gene-PUW35_13130;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=PUW35_13130 CP118132.1 Protein Homology CDS 2678757 2679575 . + 0 ID=cds-WJG91656.1;Parent=gene-PUW35_13130;Dbxref=NCBI_GP:WJG91656.1;Name=WJG91656.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=PUW35_13130;product=anaerobic sulfite reductase subunit AsrB;protein_id=WJG91656.1;transl_table=11 CP118132.1 Genbank gene 2679586 2680599 . + . ID=gene-PUW35_13135;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=PUW35_13135 CP118132.1 Protein Homology CDS 2679586 2680599 . + 0 ID=cds-WJG91657.1;Parent=gene-PUW35_13135;Dbxref=NCBI_GP:WJG91657.1;Name=WJG91657.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=PUW35_13135;product=sulfite reductase subunit C;protein_id=WJG91657.1;transl_table=11 CP118132.1 Genbank pseudogene 2680600 2681585 . - . ID=gene-PUW35_13140;Name=PUW35_13140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13140;pseudo=true CP118132.1 Protein Homology CDS 2680600 2681585 . - 0 ID=cds-PUW35_13140;Parent=gene-PUW35_13140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=PUW35_13140;product=nickel/cobalt transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2681576 2682214 . - . ID=gene-PUW35_13145;Name=PUW35_13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13145 CP118132.1 Protein Homology CDS 2681576 2682214 . - 0 ID=cds-WJG95102.1;Parent=gene-PUW35_13145;Dbxref=NCBI_GP:WJG95102.1;Name=WJG95102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=PUW35_13145;product=DUF1007 family protein;protein_id=WJG95102.1;transl_table=11 CP118132.1 Genbank gene 2682340 2683617 . + . ID=gene-PUW35_13150;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=PUW35_13150 CP118132.1 Protein Homology CDS 2682340 2683617 . + 0 ID=cds-WJG91658.1;Parent=gene-PUW35_13150;Dbxref=NCBI_GP:WJG91658.1;Name=WJG91658.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=PUW35_13150;product=stationary phase inducible protein CsiE;protein_id=WJG91658.1;transl_table=11 CP118132.1 Genbank gene 2683612 2684751 . - . ID=gene-PUW35_13155;Name=PUW35_13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13155 CP118132.1 Protein Homology CDS 2683612 2684751 . - 0 ID=cds-WJG91659.1;Parent=gene-PUW35_13155;Dbxref=NCBI_GP:WJG91659.1;Name=WJG91659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=PUW35_13155;product=3-phenylpropionate MFS transporter;protein_id=WJG91659.1;transl_table=11 CP118132.1 Genbank gene 2684947 2686200 . - . ID=gene-PUW35_13160;Name=PUW35_13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13160 CP118132.1 Protein Homology CDS 2684947 2686200 . - 0 ID=cds-WJG91660.1;Parent=gene-PUW35_13160;Dbxref=NCBI_GP:WJG91660.1;Name=WJG91660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=PUW35_13160;product=serine hydroxymethyltransferase;protein_id=WJG91660.1;transl_table=11 CP118132.1 Genbank gene 2686525 2687715 . + . ID=gene-PUW35_13165;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=PUW35_13165 CP118132.1 Protein Homology CDS 2686525 2687715 . + 0 ID=cds-WJG91661.1;Parent=gene-PUW35_13165;Dbxref=NCBI_GP:WJG91661.1;Name=WJG91661.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=PUW35_13165;product=NO-inducible flavohemoprotein;protein_id=WJG91661.1;transl_table=11 CP118132.1 Genbank gene 2687897 2689438 . + . ID=gene-PUW35_13170;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=PUW35_13170 CP118132.1 Protein Homology CDS 2687897 2689438 . + 0 ID=cds-WJG91662.1;Parent=gene-PUW35_13170;Dbxref=NCBI_GP:WJG91662.1;Name=WJG91662.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=PUW35_13170;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WJG91662.1;transl_table=11 CP118132.1 Genbank gene 2689799 2691130 . + . ID=gene-PUW35_13175;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=PUW35_13175 CP118132.1 Protein Homology CDS 2689799 2691130 . + 0 ID=cds-WJG91663.1;Parent=gene-PUW35_13175;Dbxref=NCBI_GP:WJG91663.1;Name=WJG91663.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=PUW35_13175;product=cadaverine/lysine antiporter;protein_id=WJG91663.1;transl_table=11 CP118132.1 Genbank gene 2691213 2693357 . + . ID=gene-PUW35_13180;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=PUW35_13180 CP118132.1 Protein Homology CDS 2691213 2693357 . + 0 ID=cds-WJG91664.1;Parent=gene-PUW35_13180;Dbxref=NCBI_GP:WJG91664.1;Name=WJG91664.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=PUW35_13180;product=lysine decarboxylase CadA;protein_id=WJG91664.1;transl_table=11 CP118132.1 Genbank pseudogene 2693413 2694872 . + . ID=gene-PUW35_13185;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=pseudogene;locus_tag=PUW35_13185;pseudo=true CP118132.1 Protein Homology CDS 2693413 2694872 . + 0 ID=cds-PUW35_13185;Parent=gene-PUW35_13185;Note=frameshifted;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=PUW35_13185;product=dipeptide permease DtpD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2694921 2695259 . - . ID=gene-PUW35_13190;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=PUW35_13190 CP118132.1 Protein Homology CDS 2694921 2695259 . - 0 ID=cds-WJG91665.1;Parent=gene-PUW35_13190;Dbxref=NCBI_GP:WJG91665.1;Name=WJG91665.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=PUW35_13190;product=nitrogen regulatory protein P-II;protein_id=WJG91665.1;transl_table=11 CP118132.1 Genbank gene 2695336 2696673 . - . ID=gene-PUW35_13195;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=PUW35_13195 CP118132.1 Protein Homology CDS 2695336 2696673 . - 0 ID=cds-WJG91666.1;Parent=gene-PUW35_13195;Dbxref=NCBI_GP:WJG91666.1;Name=WJG91666.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=PUW35_13195;product=two-component system response regulator GlrR;protein_id=WJG91666.1;transl_table=11 CP118132.1 Genbank gene 2696670 2697434 . - . ID=gene-PUW35_13200;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=PUW35_13200 CP118132.1 Protein Homology CDS 2696670 2697434 . - 0 ID=cds-WJG91667.1;Parent=gene-PUW35_13200;Dbxref=NCBI_GP:WJG91667.1;Name=WJG91667.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=PUW35_13200;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WJG91667.1;transl_table=11 CP118132.1 Genbank gene 2697436 2698866 . - . ID=gene-PUW35_13205;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=PUW35_13205 CP118132.1 Protein Homology CDS 2697436 2698866 . - 0 ID=cds-WJG91668.1;Parent=gene-PUW35_13205;Dbxref=NCBI_GP:WJG91668.1;Name=WJG91668.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=PUW35_13205;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WJG91668.1;transl_table=11 CP118132.1 Genbank gene 2699516 2703403 . - . ID=gene-PUW35_13210;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=PUW35_13210 CP118132.1 Protein Homology CDS 2699516 2703403 . - 0 ID=cds-WJG91669.1;Parent=gene-PUW35_13210;Dbxref=NCBI_GP:WJG91669.1;Name=WJG91669.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=PUW35_13210;product=phosphoribosylformylglycinamidine synthase;protein_id=WJG91669.1;transl_table=11 CP118132.1 Genbank gene 2703425 2703658 . + . ID=gene-PUW35_13215;Name=PUW35_13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13215 CP118132.1 Protein Homology CDS 2703425 2703658 . + 0 ID=cds-WJG91670.1;Parent=gene-PUW35_13215;Dbxref=NCBI_GP:WJG91670.1;Name=WJG91670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=PUW35_13215;product=hypothetical protein;protein_id=WJG91670.1;transl_table=11 CP118132.1 Genbank gene 2703659 2705203 . + . ID=gene-PUW35_13220;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=PUW35_13220 CP118132.1 Protein Homology CDS 2703659 2705203 . + 0 ID=cds-WJG91671.1;Parent=gene-PUW35_13220;Dbxref=NCBI_GP:WJG91671.1;Name=WJG91671.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=PUW35_13220;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WJG91671.1;transl_table=11 CP118132.1 Genbank gene 2705254 2705805 . - . ID=gene-PUW35_13225;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=PUW35_13225 CP118132.1 Protein Homology CDS 2705254 2705805 . - 0 ID=cds-WJG91672.1;Parent=gene-PUW35_13225;Dbxref=NCBI_GP:WJG91672.1;Name=WJG91672.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=PUW35_13225;product=tRNA adenosine(34) deaminase TadA;protein_id=WJG91672.1;transl_table=11 CP118132.1 Genbank gene 2705830 2706465 . - . ID=gene-PUW35_13230;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=PUW35_13230 CP118132.1 Protein Homology CDS 2705830 2706465 . - 0 ID=cds-WJG91673.1;Parent=gene-PUW35_13230;Dbxref=NCBI_GP:WJG91673.1;Name=WJG91673.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=PUW35_13230;product=phosphatidylglycerophosphatase C;protein_id=WJG91673.1;transl_table=11 CP118132.1 Genbank gene 2706469 2707830 . - . ID=gene-PUW35_13235;Name=PUW35_13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13235 CP118132.1 Protein Homology CDS 2706469 2707830 . - 0 ID=cds-WJG91674.1;Parent=gene-PUW35_13235;Dbxref=NCBI_GP:WJG91674.1;Name=WJG91674.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=PUW35_13235;product=PTS transporter subunit EIIC;protein_id=WJG91674.1;transl_table=11 CP118132.1 Genbank gene 2707841 2708734 . - . ID=gene-PUW35_13240;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=PUW35_13240 CP118132.1 Protein Homology CDS 2707841 2708734 . - 0 ID=cds-WJG91675.1;Parent=gene-PUW35_13240;Dbxref=NCBI_GP:WJG91675.1;Name=WJG91675.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=PUW35_13240;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WJG91675.1;transl_table=11 CP118132.1 Genbank gene 2708850 2709698 . + . ID=gene-PUW35_13245;Name=PUW35_13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13245 CP118132.1 Protein Homology CDS 2708850 2709698 . + 0 ID=cds-WJG91676.1;Parent=gene-PUW35_13245;Dbxref=NCBI_GP:WJG91676.1;Name=WJG91676.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=PUW35_13245;product=MurR/RpiR family transcriptional regulator;protein_id=WJG91676.1;transl_table=11 CP118132.1 Genbank pseudogene 2709737 2710652 . - . ID=gene-PUW35_13250;Name=PUW35_13250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13250;pseudo=true CP118132.1 Protein Homology CDS 2709737 2710652 . - 0 ID=cds-PUW35_13250;Parent=gene-PUW35_13250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=PUW35_13250;product=oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2710674 2711869 . - . ID=gene-PUW35_13255;Name=PUW35_13255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13255;pseudo=true CP118132.1 Protein Homology CDS 2710674 2711869 . - 0 ID=cds-PUW35_13255;Parent=gene-PUW35_13255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=PUW35_13255;product=OFA family MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2711985 2712911 . + . ID=gene-PUW35_13260;Name=PUW35_13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13260 CP118132.1 Protein Homology CDS 2711985 2712911 . + 0 ID=cds-WJG91677.1;Parent=gene-PUW35_13260;Dbxref=NCBI_GP:WJG91677.1;Name=WJG91677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=PUW35_13260;product=LysR family transcriptional regulator;protein_id=WJG91677.1;transl_table=11 CP118132.1 Genbank gene 2712949 2713209 . + . ID=gene-PUW35_13265;Name=PUW35_13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13265 CP118132.1 Protein Homology CDS 2712949 2713209 . + 0 ID=cds-WJG91678.1;Parent=gene-PUW35_13265;Dbxref=NCBI_GP:WJG91678.1;Name=WJG91678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=PUW35_13265;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WJG91678.1;transl_table=11 CP118132.1 Genbank gene 2713321 2713701 . - . ID=gene-PUW35_13270;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=PUW35_13270 CP118132.1 Protein Homology CDS 2713321 2713701 . - 0 ID=cds-WJG91679.1;Parent=gene-PUW35_13270;Dbxref=NCBI_GP:WJG91679.1;Name=WJG91679.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=PUW35_13270;product=holo-ACP synthase;protein_id=WJG91679.1;transl_table=11 CP118132.1 Genbank gene 2713701 2714432 . - . ID=gene-PUW35_13275;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=PUW35_13275 CP118132.1 Protein Homology CDS 2713701 2714432 . - 0 ID=cds-WJG91680.1;Parent=gene-PUW35_13275;Dbxref=NCBI_GP:WJG91680.1;Name=WJG91680.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=PUW35_13275;product=pyridoxine 5'-phosphate synthase;protein_id=WJG91680.1;transl_table=11 CP118132.1 Genbank gene 2714444 2715172 . - . ID=gene-PUW35_13280;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=PUW35_13280 CP118132.1 Protein Homology CDS 2714444 2715172 . - 0 ID=cds-WJG91681.1;Parent=gene-PUW35_13280;Dbxref=NCBI_GP:WJG91681.1;Name=WJG91681.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=PUW35_13280;product=DNA repair protein RecO;protein_id=WJG91681.1;transl_table=11 CP118132.1 Genbank pseudogene 2715184 2716088 . - . ID=gene-PUW35_13285;Name=era;gbkey=Gene;gene=era;gene_biotype=pseudogene;locus_tag=PUW35_13285;pseudo=true CP118132.1 Protein Homology CDS 2715184 2716088 . - 0 ID=cds-PUW35_13285;Parent=gene-PUW35_13285;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=PUW35_13285;product=GTPase Era;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2716085 2716765 . - . ID=gene-PUW35_13290;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=PUW35_13290 CP118132.1 Protein Homology CDS 2716085 2716765 . - 0 ID=cds-WJG91682.1;Parent=gene-PUW35_13290;Dbxref=NCBI_GP:WJG91682.1;Name=WJG91682.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=PUW35_13290;product=ribonuclease III;protein_id=WJG91682.1;transl_table=11 CP118132.1 Genbank gene 2717039 2718013 . - . ID=gene-PUW35_13295;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PUW35_13295 CP118132.1 Protein Homology CDS 2717039 2718013 . - 0 ID=cds-WJG91683.1;Parent=gene-PUW35_13295;Dbxref=NCBI_GP:WJG91683.1;Name=WJG91683.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=PUW35_13295;product=signal peptidase I;protein_id=WJG91683.1;transl_table=11 CP118132.1 Genbank gene 2718030 2719829 . - . ID=gene-PUW35_13300;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=PUW35_13300 CP118132.1 Protein Homology CDS 2718030 2719829 . - 0 ID=cds-WJG91684.1;Parent=gene-PUW35_13300;Dbxref=NCBI_GP:WJG91684.1;Name=WJG91684.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=PUW35_13300;product=translation elongation factor 4;protein_id=WJG91684.1;transl_table=11 CP118132.1 Genbank gene 2720080 2720559 . - . ID=gene-PUW35_13305;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=PUW35_13305 CP118132.1 Protein Homology CDS 2720080 2720559 . - 0 ID=cds-WJG91685.1;Parent=gene-PUW35_13305;Dbxref=NCBI_GP:WJG91685.1;Name=WJG91685.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=PUW35_13305;product=SoxR-reducing system protein RseC;protein_id=WJG91685.1;transl_table=11 CP118132.1 Genbank gene 2720556 2721512 . - . ID=gene-PUW35_13310;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=PUW35_13310 CP118132.1 Protein Homology CDS 2720556 2721512 . - 0 ID=cds-WJG91686.1;Parent=gene-PUW35_13310;Dbxref=NCBI_GP:WJG91686.1;Name=WJG91686.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=PUW35_13310;product=sigma-E factor regulatory protein RseB;protein_id=WJG91686.1;transl_table=11 CP118132.1 Genbank gene 2721512 2722162 . - . ID=gene-PUW35_13315;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=PUW35_13315 CP118132.1 Protein Homology CDS 2721512 2722162 . - 0 ID=cds-WJG91687.1;Parent=gene-PUW35_13315;Dbxref=NCBI_GP:WJG91687.1;Name=WJG91687.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=PUW35_13315;product=anti-sigma-E factor RseA;protein_id=WJG91687.1;transl_table=11 CP118132.1 Genbank gene 2722194 2722769 . - . ID=gene-PUW35_13320;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=PUW35_13320 CP118132.1 Protein Homology CDS 2722194 2722769 . - 0 ID=cds-WJG91688.1;Parent=gene-PUW35_13320;Dbxref=NCBI_GP:WJG91688.1;Name=WJG91688.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=PUW35_13320;product=RNA polymerase sigma factor RpoE;protein_id=WJG91688.1;transl_table=11 CP118132.1 Genbank gene 2722766 2722930 . - . ID=gene-PUW35_13325;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=PUW35_13325 CP118132.1 Protein Homology CDS 2722766 2722930 . - 0 ID=cds-WJG91689.1;Parent=gene-PUW35_13325;Dbxref=NCBI_GP:WJG91689.1;Name=WJG91689.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=PUW35_13325;product=rpoE leader peptide RseD;protein_id=WJG91689.1;transl_table=11 CP118132.1 Genbank gene 2723194 2724816 . + . ID=gene-PUW35_13330;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=PUW35_13330 CP118132.1 Protein Homology CDS 2723194 2724816 . + 0 ID=cds-WJG91690.1;Parent=gene-PUW35_13330;Dbxref=NCBI_GP:WJG91690.1;Name=WJG91690.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=PUW35_13330;product=L-aspartate oxidase;protein_id=WJG91690.1;transl_table=11 CP118132.1 Genbank gene 2724801 2725538 . - . ID=gene-PUW35_13335;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=PUW35_13335 CP118132.1 Protein Homology CDS 2724801 2725538 . - 0 ID=cds-WJG91691.1;Parent=gene-PUW35_13335;Dbxref=NCBI_GP:WJG91691.1;Name=WJG91691.1;gbkey=CDS;gene=trmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=PUW35_13335;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WJG91691.1;transl_table=11 CP118132.1 Genbank gene 2725668 2727002 . + . ID=gene-PUW35_13340;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=PUW35_13340 CP118132.1 Protein Homology CDS 2725668 2727002 . + 0 ID=cds-WJG91692.1;Parent=gene-PUW35_13340;Dbxref=NCBI_GP:WJG91692.1;Name=WJG91692.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=PUW35_13340;product=ATP-dependent RNA helicase SrmB;protein_id=WJG91692.1;transl_table=11 CP118132.1 Genbank gene 2727020 2727919 . - . ID=gene-PUW35_13345;Name=PUW35_13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13345 CP118132.1 Protein Homology CDS 2727020 2727919 . - 0 ID=cds-WJG91693.1;Parent=gene-PUW35_13345;Dbxref=NCBI_GP:WJG91693.1;Name=WJG91693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=PUW35_13345;product=LysR family transcriptional regulator;protein_id=WJG91693.1;transl_table=11 CP118132.1 Genbank gene 2728022 2728609 . + . ID=gene-PUW35_13350;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=PUW35_13350 CP118132.1 Protein Homology CDS 2728022 2728609 . + 0 ID=cds-WJG91694.1;Parent=gene-PUW35_13350;Dbxref=NCBI_GP:WJG91694.1;Name=WJG91694.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=PUW35_13350;product=cysteine/O-acetylserine transporter;protein_id=WJG91694.1;transl_table=11 CP118132.1 Genbank gene 2728671 2729054 . - . ID=gene-PUW35_13355;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=PUW35_13355 CP118132.1 Protein Homology CDS 2728671 2729054 . - 0 ID=cds-WJG91695.1;Parent=gene-PUW35_13355;Dbxref=NCBI_GP:WJG91695.1;Name=WJG91695.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=PUW35_13355;product=autonomous glycyl radical cofactor GrcA;protein_id=WJG91695.1;transl_table=11 CP118132.1 Genbank gene 2729373 2730062 . + . ID=gene-PUW35_13360;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=PUW35_13360 CP118132.1 Protein Homology CDS 2729373 2730062 . + 0 ID=cds-WJG91696.1;Parent=gene-PUW35_13360;Dbxref=NCBI_GP:WJG91696.1;Name=WJG91696.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=PUW35_13360;product=uracil-DNA glycosylase;protein_id=WJG91696.1;transl_table=11 CP118132.1 Genbank gene 2730178 2731215 . - . ID=gene-PUW35_13365;Name=PUW35_13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13365 CP118132.1 Protein Homology CDS 2730178 2731215 . - 0 ID=cds-WJG91697.1;Parent=gene-PUW35_13365;Dbxref=NCBI_GP:WJG91697.1;Name=WJG91697.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=PUW35_13365;product=tRNA/rRNA methyltransferase;protein_id=WJG91697.1;transl_table=11 CP118132.1 Genbank gene 2731419 2731838 . + . ID=gene-PUW35_13370;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=PUW35_13370 CP118132.1 Protein Homology CDS 2731419 2731838 . + 0 ID=cds-WJG91698.1;Parent=gene-PUW35_13370;Dbxref=NCBI_GP:WJG91698.1;Name=WJG91698.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=PUW35_13370;product=thioredoxin TrxC;protein_id=WJG91698.1;transl_table=11 CP118132.1 Genbank gene 2731911 2732591 . + . ID=gene-PUW35_13375;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=PUW35_13375 CP118132.1 Protein Homology CDS 2731911 2732591 . + 0 ID=cds-WJG91699.1;Parent=gene-PUW35_13375;Dbxref=NCBI_GP:WJG91699.1;Name=WJG91699.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=PUW35_13375;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WJG91699.1;transl_table=11 CP118132.1 Genbank gene 2732645 2735305 . + . ID=gene-PUW35_13380;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=PUW35_13380 CP118132.1 Protein Homology CDS 2732645 2735305 . + 0 ID=cds-WJG91700.1;Parent=gene-PUW35_13380;Dbxref=NCBI_GP:WJG91700.1;Name=WJG91700.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=PUW35_13380;product=protein lysine acetyltransferase;protein_id=WJG91700.1;transl_table=11 CP118132.1 Genbank pseudogene 2735395 2735436 . + . ID=gene-PUW35_13385;Name=PUW35_13385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13385;pseudo=true CP118132.1 Protein Homology CDS 2735395 2735436 . + 0 ID=cds-PUW35_13385;Parent=gene-PUW35_13385;Note=too short;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051192.1;locus_tag=PUW35_13385;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2735420 2736775 . + . ID=gene-PUW35_13390;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=PUW35_13390 CP118132.1 Protein Homology CDS 2735420 2736775 . + 0 ID=cds-WJG95103.1;Parent=gene-PUW35_13390;Dbxref=NCBI_GP:WJG95103.1;Name=WJG95103.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=PUW35_13390;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WJG95103.1;transl_table=11 CP118132.1 Genbank gene 2736820 2737143 . + . ID=gene-PUW35_13395;Name=PUW35_13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13395 CP118132.1 Protein Homology CDS 2736820 2737143 . + 0 ID=cds-WJG91701.1;Parent=gene-PUW35_13395;Dbxref=NCBI_GP:WJG91701.1;Name=WJG91701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=PUW35_13395;product=YfiM family lipoprotein;protein_id=WJG91701.1;transl_table=11 CP118132.1 Genbank gene 2737140 2738441 . - . ID=gene-PUW35_13400;Name=PUW35_13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13400 CP118132.1 Protein Homology CDS 2737140 2738441 . - 0 ID=cds-WJG91702.1;Parent=gene-PUW35_13400;Dbxref=NCBI_GP:WJG91702.1;Name=WJG91702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=PUW35_13400;product=MFS transporter;protein_id=WJG91702.1;transl_table=11 CP118132.1 Genbank gene 2738545 2739000 . - . ID=gene-PUW35_13405;Name=PUW35_13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13405 CP118132.1 Protein Homology CDS 2738545 2739000 . - 0 ID=cds-WJG91703.1;Parent=gene-PUW35_13405;Dbxref=NCBI_GP:WJG91703.1;Name=WJG91703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=PUW35_13405;product=DUF4385 domain-containing protein;protein_id=WJG91703.1;transl_table=11 CP118132.1 Genbank gene 2739192 2739307 . - . ID=gene-PUW35_13410;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW35_13410 CP118132.1 cmsearch rRNA 2739192 2739307 . - . ID=rna-PUW35_13410;Parent=gene-PUW35_13410;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_13410;product=5S ribosomal RNA CP118132.1 cmsearch exon 2739192 2739307 . - . ID=exon-PUW35_13410-1;Parent=rna-PUW35_13410;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_13410;product=5S ribosomal RNA CP118132.1 Genbank gene 2739504 2742492 . - . ID=gene-PUW35_13415;Name=PUW35_13415;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_13415 CP118132.1 cmsearch rRNA 2739504 2742492 . - . ID=rna-PUW35_13415;Parent=gene-PUW35_13415;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_13415;product=23S ribosomal RNA CP118132.1 cmsearch exon 2739504 2742492 . - . ID=exon-PUW35_13415-1;Parent=rna-PUW35_13415;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_13415;product=23S ribosomal RNA CP118132.1 Genbank gene 2742686 2742761 . - . ID=gene-PUW35_13420;Name=PUW35_13420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_13420 CP118132.1 tRNAscan-SE tRNA 2742686 2742761 . - . ID=rna-PUW35_13420;Parent=gene-PUW35_13420;anticodon=(pos:complement(2742725..2742727));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13420;product=tRNA-Glu CP118132.1 tRNAscan-SE exon 2742686 2742761 . - . ID=exon-PUW35_13420-1;Parent=rna-PUW35_13420;anticodon=(pos:complement(2742725..2742727));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13420;product=tRNA-Glu CP118132.1 Genbank gene 2742847 2744388 . - . ID=gene-PUW35_13425;Name=PUW35_13425;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_13425 CP118132.1 cmsearch rRNA 2742847 2744388 . - . ID=rna-PUW35_13425;Parent=gene-PUW35_13425;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_13425;product=16S ribosomal RNA CP118132.1 cmsearch exon 2742847 2744388 . - . ID=exon-PUW35_13425-1;Parent=rna-PUW35_13425;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_13425;product=16S ribosomal RNA CP118132.1 Genbank gene 2744841 2747414 . - . ID=gene-PUW35_13430;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=PUW35_13430 CP118132.1 Protein Homology CDS 2744841 2747414 . - 0 ID=cds-WJG91704.1;Parent=gene-PUW35_13430;Dbxref=NCBI_GP:WJG91704.1;Name=WJG91704.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=PUW35_13430;product=ATP-dependent chaperone ClpB;protein_id=WJG91704.1;transl_table=11 CP118132.1 Genbank gene 2747544 2748275 . - . ID=gene-PUW35_13435;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=PUW35_13435 CP118132.1 Protein Homology CDS 2747544 2748275 . - 0 ID=cds-WJG91705.1;Parent=gene-PUW35_13435;Dbxref=NCBI_GP:WJG91705.1;Name=WJG91705.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=PUW35_13435;product=purine nucleoside phosphorylase YfiH;protein_id=WJG91705.1;transl_table=11 CP118132.1 Genbank pseudogene 2748272 2749251 . - . ID=gene-PUW35_13440;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=pseudogene;locus_tag=PUW35_13440;pseudo=true CP118132.1 Protein Homology CDS 2748272 2749251 . - 0 ID=cds-PUW35_13440;Parent=gene-PUW35_13440;Note=frameshifted;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=PUW35_13440;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2749383 2750120 . + . ID=gene-PUW35_13445;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=PUW35_13445 CP118132.1 Protein Homology CDS 2749383 2750120 . + 0 ID=cds-WJG91706.1;Parent=gene-PUW35_13445;Dbxref=NCBI_GP:WJG91706.1;Name=WJG91706.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=PUW35_13445;product=outer membrane protein assembly factor BamD;protein_id=WJG91706.1;transl_table=11 CP118132.1 Genbank gene 2750392 2750730 . + . ID=gene-PUW35_13450;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=PUW35_13450 CP118132.1 Protein Homology CDS 2750392 2750730 . + 0 ID=cds-WJG91707.1;Parent=gene-PUW35_13450;Dbxref=NCBI_GP:WJG91707.1;Name=WJG91707.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=PUW35_13450;product=ribosome-associated translation inhibitor RaiA;protein_id=WJG91707.1;transl_table=11 CP118132.1 cmsearch sequence_feature 2750833 2750958 . + . ID=id-CP118132.1:2750833..2750958;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118132.1 Genbank gene 2750834 2750881 . + . ID=gene-PUW35_13455;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=PUW35_13455 CP118132.1 Protein Homology CDS 2750834 2750881 . + 0 ID=cds-WJG95104.1;Parent=gene-PUW35_13455;Dbxref=NCBI_GP:WJG95104.1;Name=WJG95104.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=PUW35_13455;product=pheA operon leader peptide PheL;protein_id=WJG95104.1;transl_table=11 CP118132.1 Genbank gene 2750981 2752141 . + . ID=gene-PUW35_13460;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=PUW35_13460 CP118132.1 Protein Homology CDS 2750981 2752141 . + 0 ID=cds-WJG91708.1;Parent=gene-PUW35_13460;Dbxref=NCBI_GP:WJG91708.1;Name=WJG91708.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=PUW35_13460;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WJG91708.1;transl_table=11 CP118132.1 Genbank gene 2752102 2753010 . - . ID=gene-PUW35_13465;Name=PUW35_13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13465 CP118132.1 Protein Homology CDS 2752102 2753010 . - 0 ID=cds-WJG91709.1;Parent=gene-PUW35_13465;Dbxref=NCBI_GP:WJG91709.1;Name=WJG91709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=PUW35_13465;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WJG91709.1;transl_table=11 CP118132.1 Genbank gene 2753068 2754189 . - . ID=gene-PUW35_13470;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=PUW35_13470 CP118132.1 Protein Homology CDS 2753068 2754189 . - 0 ID=cds-WJG91710.1;Parent=gene-PUW35_13470;Dbxref=NCBI_GP:WJG91710.1;Name=WJG91710.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=PUW35_13470;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WJG91710.1;transl_table=11 CP118132.1 Genbank gene 2754199 2755269 . - . ID=gene-PUW35_13475;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=PUW35_13475 CP118132.1 Protein Homology CDS 2754199 2755269 . - 0 ID=cds-WJG91711.1;Parent=gene-PUW35_13475;Dbxref=NCBI_GP:WJG91711.1;Name=WJG91711.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=PUW35_13475;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WJG91711.1;transl_table=11 CP118132.1 Genbank gene 2755708 2756226 . + . ID=gene-PUW35_13480;Name=PUW35_13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13480 CP118132.1 Protein Homology CDS 2755708 2756226 . + 0 ID=cds-WJG91712.1;Parent=gene-PUW35_13480;Dbxref=NCBI_GP:WJG91712.1;Name=WJG91712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=PUW35_13480;product=YfiR family protein;protein_id=WJG91712.1;transl_table=11 CP118132.1 Genbank gene 2756219 2757439 . + . ID=gene-PUW35_13485;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=PUW35_13485 CP118132.1 Protein Homology CDS 2756219 2757439 . + 0 ID=cds-WJG91713.1;Parent=gene-PUW35_13485;Dbxref=NCBI_GP:WJG91713.1;Name=WJG91713.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=PUW35_13485;product=diguanylate cyclase DgcN;protein_id=WJG91713.1;transl_table=11 CP118132.1 Genbank gene 2757596 2757943 . - . ID=gene-PUW35_13490;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=PUW35_13490 CP118132.1 Protein Homology CDS 2757596 2757943 . - 0 ID=cds-WJG91714.1;Parent=gene-PUW35_13490;Dbxref=NCBI_GP:WJG91714.1;Name=WJG91714.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=PUW35_13490;product=50S ribosomal protein L19;protein_id=WJG91714.1;transl_table=11 CP118132.1 Genbank gene 2757984 2758751 . - . ID=gene-PUW35_13495;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=PUW35_13495 CP118132.1 Protein Homology CDS 2757984 2758751 . - 0 ID=cds-WJG91715.1;Parent=gene-PUW35_13495;Dbxref=NCBI_GP:WJG91715.1;Name=WJG91715.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=PUW35_13495;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WJG91715.1;transl_table=11 CP118132.1 Genbank gene 2758796 2759344 . - . ID=gene-PUW35_13500;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=PUW35_13500 CP118132.1 Protein Homology CDS 2758796 2759344 . - 0 ID=cds-WJG95105.1;Parent=gene-PUW35_13500;Dbxref=NCBI_GP:WJG95105.1;Name=WJG95105.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=PUW35_13500;product=ribosome maturation factor RimM;protein_id=WJG95105.1;transl_table=11 CP118132.1 Genbank gene 2759363 2759611 . - . ID=gene-PUW35_13505;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=PUW35_13505 CP118132.1 Protein Homology CDS 2759363 2759611 . - 0 ID=cds-WJG91716.1;Parent=gene-PUW35_13505;Dbxref=NCBI_GP:WJG91716.1;Name=WJG91716.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=PUW35_13505;product=30S ribosomal protein S16;protein_id=WJG91716.1;transl_table=11 CP118132.1 Genbank gene 2759864 2761225 . - . ID=gene-PUW35_13510;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=PUW35_13510 CP118132.1 Protein Homology CDS 2759864 2761225 . - 0 ID=cds-WJG91717.1;Parent=gene-PUW35_13510;Dbxref=NCBI_GP:WJG91717.1;Name=WJG91717.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=PUW35_13510;product=signal recognition particle protein;protein_id=WJG91717.1;transl_table=11 CP118132.1 Genbank gene 2761391 2762182 . + . ID=gene-PUW35_13515;Name=PUW35_13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13515 CP118132.1 Protein Homology CDS 2761391 2762182 . + 0 ID=cds-WJG91718.1;Parent=gene-PUW35_13515;Dbxref=NCBI_GP:WJG91718.1;Name=WJG91718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=PUW35_13515;product=inner membrane protein YpjD;protein_id=WJG91718.1;transl_table=11 CP118132.1 Genbank gene 2762202 2763488 . + . ID=gene-PUW35_13520;Name=PUW35_13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13520 CP118132.1 Protein Homology CDS 2762202 2763488 . + 0 ID=cds-WJG95106.1;Parent=gene-PUW35_13520;Dbxref=NCBI_GP:WJG95106.1;Name=WJG95106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=PUW35_13520;product=HlyC/CorC family transporter;protein_id=WJG95106.1;transl_table=11 CP118132.1 Genbank gene 2763609 2764214 . + . ID=gene-PUW35_13525;Name=PUW35_13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13525 CP118132.1 Protein Homology CDS 2763609 2764214 . + 0 ID=cds-WJG91719.1;Parent=gene-PUW35_13525;Dbxref=NCBI_GP:WJG91719.1;Name=WJG91719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=PUW35_13525;product=cytoplasmic protein;protein_id=WJG91719.1;transl_table=11 CP118132.1 Genbank gene 2764249 2764839 . - . ID=gene-PUW35_13530;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=PUW35_13530 CP118132.1 Protein Homology CDS 2764249 2764839 . - 0 ID=cds-WJG91720.1;Parent=gene-PUW35_13530;Dbxref=NCBI_GP:WJG91720.1;Name=WJG91720.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=PUW35_13530;product=nucleotide exchange factor GrpE;protein_id=WJG91720.1;transl_table=11 CP118132.1 Genbank pseudogene 2764963 2765840 . + . ID=gene-PUW35_13535;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=pseudogene;locus_tag=PUW35_13535;pseudo=true CP118132.1 Protein Homology CDS 2764963 2765840 . + 0 ID=cds-PUW35_13535;Parent=gene-PUW35_13535;Note=frameshifted;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: protein motif:HMM:NF039482.1;locus_tag=PUW35_13535;product=NAD(+) kinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2765926 2767587 . + . ID=gene-PUW35_13540;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=PUW35_13540 CP118132.1 Protein Homology CDS 2765926 2767587 . + 0 ID=cds-WJG91721.1;Parent=gene-PUW35_13540;Dbxref=NCBI_GP:WJG91721.1;Name=WJG91721.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=PUW35_13540;product=DNA repair protein RecN;protein_id=WJG91721.1;transl_table=11 CP118132.1 Genbank gene 2767736 2768074 . + . ID=gene-PUW35_13545;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=PUW35_13545 CP118132.1 Protein Homology CDS 2767736 2768074 . + 0 ID=cds-WJG91722.1;Parent=gene-PUW35_13545;Dbxref=NCBI_GP:WJG91722.1;Name=WJG91722.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=PUW35_13545;product=outer membrane protein assembly factor BamE;protein_id=WJG91722.1;transl_table=11 CP118132.1 Genbank gene 2768239 2768529 . - . ID=gene-PUW35_13550;Name=PUW35_13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13550 CP118132.1 Protein Homology CDS 2768239 2768529 . - 0 ID=cds-WJG91723.1;Parent=gene-PUW35_13550;Dbxref=NCBI_GP:WJG91723.1;Name=WJG91723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=PUW35_13550;product=RnfH family protein;protein_id=WJG91723.1;transl_table=11 CP118132.1 Genbank gene 2768519 2768956 . - . ID=gene-PUW35_13555;Name=PUW35_13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13555 CP118132.1 Protein Homology CDS 2768519 2768956 . - 0 ID=cds-WJG91724.1;Parent=gene-PUW35_13555;Dbxref=NCBI_GP:WJG91724.1;Name=WJG91724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=PUW35_13555;product=type II toxin-antitoxin system RatA family toxin;protein_id=WJG91724.1;transl_table=11 CP118132.1 Genbank gene 2769145 2769627 . + . ID=gene-PUW35_13560;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=PUW35_13560 CP118132.1 Protein Homology CDS 2769145 2769627 . + 0 ID=cds-WJG91725.1;Parent=gene-PUW35_13560;Dbxref=NCBI_GP:WJG91725.1;Name=WJG91725.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=PUW35_13560;product=SsrA-binding protein SmpB;protein_id=WJG91725.1;transl_table=11 CP118132.1 Genbank pseudogene 2770241 2781698 . + . ID=gene-PUW35_13565;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=pseudogene;locus_tag=PUW35_13565;pseudo=true CP118132.1 Protein Homology CDS 2770241 2781698 . + 0 ID=cds-PUW35_13565;Parent=gene-PUW35_13565;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=PUW35_13565;product=biofilm-associated protein BapA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2781763 2783172 . + . ID=gene-PUW35_13570;Name=PUW35_13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13570 CP118132.1 Protein Homology CDS 2781763 2783172 . + 0 ID=cds-WJG91726.1;Parent=gene-PUW35_13570;Dbxref=NCBI_GP:WJG91726.1;Name=WJG91726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=PUW35_13570;product=TolC family outer membrane protein;protein_id=WJG91726.1;transl_table=11 CP118132.1 Genbank pseudogene 2783169 2785347 . + . ID=gene-PUW35_13575;Name=PUW35_13575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13575;pseudo=true CP118132.1 Protein Homology CDS 2783169 2785347 . + 0 ID=cds-PUW35_13575;Parent=gene-PUW35_13575;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=PUW35_13575;product=type I secretion system permease/ATPase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2785355 2786518 . + . ID=gene-PUW35_13580;Name=PUW35_13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13580 CP118132.1 Protein Homology CDS 2785355 2786518 . + 0 ID=cds-WJG95107.1;Parent=gene-PUW35_13580;Dbxref=NCBI_GP:WJG95107.1;Name=WJG95107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=PUW35_13580;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WJG95107.1;transl_table=11 CP118132.1 Genbank gene 2786590 2786952 . + . ID=gene-PUW35_13585;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=PUW35_13585 CP118132.1 cmsearch tmRNA 2786590 2786952 . + . ID=rna-PUW35_13585;Parent=gene-PUW35_13585;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_13585;product=transfer-messenger RNA CP118132.1 cmsearch exon 2786590 2786952 . + . ID=exon-PUW35_13585-1;Parent=rna-PUW35_13585;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_13585;product=transfer-messenger RNA CP118132.1 Genbank gene 2787050 2787643 . + . ID=gene-PUW35_13590;Name=PUW35_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13590 CP118132.1 Protein Homology CDS 2787050 2787643 . + 0 ID=cds-WJG91727.1;Parent=gene-PUW35_13590;Dbxref=NCBI_GP:WJG91727.1;Name=WJG91727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142974.1;locus_tag=PUW35_13590;product=hypothetical protein;protein_id=WJG91727.1;transl_table=11 CP118132.1 Genbank gene 2788041 2788844 . + . ID=gene-PUW35_13595;Name=PUW35_13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13595 CP118132.1 Protein Homology CDS 2788041 2788844 . + 0 ID=cds-WJG91728.1;Parent=gene-PUW35_13595;Dbxref=NCBI_GP:WJG91728.1;Name=WJG91728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445378.1;locus_tag=PUW35_13595;product=DUF3800 domain-containing protein;protein_id=WJG91728.1;transl_table=11 CP118132.1 Genbank pseudogene 2789541 2789624 . + . ID=gene-PUW35_13600;Name=PUW35_13600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13600;pseudo=true CP118132.1 Protein Homology CDS 2789541 2789624 . + 0 ID=cds-PUW35_13600;Parent=gene-PUW35_13600;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=PUW35_13600;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2789640 2790751 . - . ID=gene-PUW35_13605;Name=PUW35_13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13605 CP118132.1 Protein Homology CDS 2790490 2790751 . - 0 ID=cds-WJG91729.1;Parent=gene-PUW35_13605;Dbxref=NCBI_GP:WJG91729.1;Name=WJG91729.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=PUW35_13605;product=IS3-like element IS1351 family transposase;protein_id=WJG91729.1;transl_table=11 CP118132.1 Protein Homology CDS 2789640 2790490 . - 2 ID=cds-WJG91729.1;Parent=gene-PUW35_13605;Dbxref=NCBI_GP:WJG91729.1;Name=WJG91729.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=PUW35_13605;product=IS3-like element IS1351 family transposase;protein_id=WJG91729.1;transl_table=11 CP118132.1 Genbank pseudogene 2790827 2791210 . + . ID=gene-PUW35_13610;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=PUW35_13610;pseudo=true CP118132.1 Protein Homology CDS 2790827 2791210 . + 0 ID=cds-PUW35_13610;Parent=gene-PUW35_13610;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=PUW35_13610;product=IS200/IS605-like element IS200F family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2791836 2792951 . + . ID=gene-PUW35_13615;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=PUW35_13615 CP118132.1 Protein Homology CDS 2791836 2792951 . + 0 ID=cds-WJG91730.1;Parent=gene-PUW35_13615;Dbxref=NCBI_GP:WJG91730.1;Name=WJG91730.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=PUW35_13615;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WJG91730.1;transl_table=11 CP118132.1 Genbank gene 2793032 2796688 . + . ID=gene-PUW35_13620;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=PUW35_13620 CP118132.1 Protein Homology CDS 2793032 2796688 . + 0 ID=cds-WJG91731.1;Parent=gene-PUW35_13620;Dbxref=NCBI_GP:WJG91731.1;Name=WJG91731.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=PUW35_13620;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WJG91731.1;transl_table=11 CP118132.1 Genbank pseudogene 2796798 2798043 . + . ID=gene-PUW35_13625;Name=PUW35_13625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13625;pseudo=true CP118132.1 Protein Homology CDS 2796798 2798043 . + 0 ID=cds-PUW35_13625;Parent=gene-PUW35_13625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=PUW35_13625;product=esterase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2798075 2799004 . + . ID=gene-PUW35_13630;Name=PUW35_13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13630 CP118132.1 Protein Homology CDS 2798075 2799004 . + 0 ID=cds-WJG91732.1;Parent=gene-PUW35_13630;Dbxref=NCBI_GP:WJG91732.1;Name=WJG91732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=PUW35_13630;product=alpha/beta hydrolase;protein_id=WJG91732.1;transl_table=11 CP118132.1 Genbank gene 2799046 2801220 . - . ID=gene-PUW35_13635;Name=PUW35_13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13635 CP118132.1 Protein Homology CDS 2799046 2801220 . - 0 ID=cds-WJG91733.1;Parent=gene-PUW35_13635;Dbxref=NCBI_GP:WJG91733.1;Name=WJG91733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=PUW35_13635;product=TonB-dependent siderophore receptor;protein_id=WJG91733.1;transl_table=11 CP118132.1 Genbank pseudogene 2801764 2802082 . - . ID=gene-PUW35_13640;Name=PUW35_13640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13640;pseudo=true CP118132.1 Protein Homology CDS 2801764 2802082 . - 0 ID=cds-PUW35_13640;Parent=gene-PUW35_13640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=PUW35_13640;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2802257 2803309 . - . ID=gene-PUW35_13645;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=pseudogene;locus_tag=PUW35_13645;pseudo=true CP118132.1 Protein Homology CDS 2802257 2803309 . - 0 ID=cds-PUW35_13645;Parent=gene-PUW35_13645;Note=internal stop;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=PUW35_13645;product=SPI-2 type III secretion system effector PipB2;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2803828 2804757 . + . ID=gene-PUW35_13650;Name=PUW35_13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13650 CP118132.1 Protein Homology CDS 2803828 2804757 . + 0 ID=cds-WJG91734.1;Parent=gene-PUW35_13650;Dbxref=NCBI_GP:WJG91734.1;Name=WJG91734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=PUW35_13650;product=VirK family antimicrobial peptide resistance protein;protein_id=WJG91734.1;transl_table=11 CP118132.1 Genbank gene 2805051 2805947 . + . ID=gene-PUW35_13655;Name=PUW35_13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13655 CP118132.1 Protein Homology CDS 2805051 2805947 . + 0 ID=cds-WJG91735.1;Parent=gene-PUW35_13655;Dbxref=NCBI_GP:WJG91735.1;Name=WJG91735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=PUW35_13655;product=antimicrobial resistance protein Mig-14;protein_id=WJG91735.1;transl_table=11 CP118132.1 Genbank gene 2806669 2807682 . - . ID=gene-PUW35_13660;Name=PUW35_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13660 CP118132.1 Protein Homology CDS 2806669 2807682 . - 0 ID=cds-WJG91736.1;Parent=gene-PUW35_13660;Dbxref=NCBI_GP:WJG91736.1;Name=WJG91736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=PUW35_13660;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WJG91736.1;transl_table=11 CP118132.1 Genbank gene 2807815 2809230 . - . ID=gene-PUW35_13665;Name=PUW35_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13665 CP118132.1 Protein Homology CDS 2807815 2809230 . - 0 ID=cds-WJG95108.1;Parent=gene-PUW35_13665;Dbxref=NCBI_GP:WJG95108.1;Name=WJG95108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=PUW35_13665;product=sensor histidine kinase;protein_id=WJG95108.1;transl_table=11 CP118132.1 Genbank gene 2809217 2809891 . - . ID=gene-PUW35_13670;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=PUW35_13670 CP118132.1 Protein Homology CDS 2809217 2809891 . - 0 ID=cds-WJG91737.1;Parent=gene-PUW35_13670;Dbxref=NCBI_GP:WJG91737.1;Name=WJG91737.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=PUW35_13670;product=transcriptional regulator TctD;protein_id=WJG91737.1;transl_table=11 CP118132.1 Genbank gene 2810046 2811023 . + . ID=gene-PUW35_13675;Name=PUW35_13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13675 CP118132.1 Protein Homology CDS 2810046 2811023 . + 0 ID=cds-WJG91738.1;Parent=gene-PUW35_13675;Dbxref=NCBI_GP:WJG91738.1;Name=WJG91738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=PUW35_13675;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WJG91738.1;transl_table=11 CP118132.1 Genbank gene 2811035 2811469 . + . ID=gene-PUW35_13680;Name=PUW35_13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13680 CP118132.1 Protein Homology CDS 2811035 2811469 . + 0 ID=cds-WJG91739.1;Parent=gene-PUW35_13680;Dbxref=NCBI_GP:WJG91739.1;Name=WJG91739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=PUW35_13680;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WJG91739.1;transl_table=11 CP118132.1 Genbank pseudogene 2811480 2812993 . + . ID=gene-PUW35_13685;Name=PUW35_13685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13685;pseudo=true CP118132.1 Protein Homology CDS 2811480 2812993 . + 0 ID=cds-PUW35_13685;Parent=gene-PUW35_13685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=PUW35_13685;product=tripartite tricarboxylate transporter permease;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2813297 2814274 . + . ID=gene-PUW35_13690;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=PUW35_13690 CP118132.1 Protein Homology CDS 2813297 2814274 . + 0 ID=cds-WJG91740.1;Parent=gene-PUW35_13690;Dbxref=NCBI_GP:WJG91740.1;Name=WJG91740.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=PUW35_13690;product=glutarate dioxygenase GlaH;protein_id=WJG91740.1;transl_table=11 CP118132.1 Genbank pseudogene 2814300 2815561 . + . ID=gene-PUW35_13695;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=pseudogene;locus_tag=PUW35_13695;pseudo=true CP118132.1 Protein Homology CDS 2814300 2815561 . + 0 ID=cds-PUW35_13695;Parent=gene-PUW35_13695;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=PUW35_13695;product=L-2-hydroxyglutarate oxidase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2815583 2817031 . + . ID=gene-PUW35_13700;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=PUW35_13700 CP118132.1 Protein Homology CDS 2815583 2817031 . + 0 ID=cds-WJG91741.1;Parent=gene-PUW35_13700;Dbxref=NCBI_GP:WJG91741.1;Name=WJG91741.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=PUW35_13700;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WJG91741.1;transl_table=11 CP118132.1 Genbank pseudogene 2817046 2818325 . + . ID=gene-PUW35_13705;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=pseudogene;locus_tag=PUW35_13705;pseudo=true CP118132.1 Protein Homology CDS 2817046 2818325 . + 0 ID=cds-PUW35_13705;Parent=gene-PUW35_13705;Note=frameshifted;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=PUW35_13705;product=4-aminobutyrate--2-oxoglutarate transaminase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2818455 2819855 . + . ID=gene-PUW35_13710;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=PUW35_13710 CP118132.1 Protein Homology CDS 2818455 2819855 . + 0 ID=cds-WJG91742.1;Parent=gene-PUW35_13710;Dbxref=NCBI_GP:WJG91742.1;Name=WJG91742.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=PUW35_13710;product=GABA permease;protein_id=WJG91742.1;transl_table=11 CP118132.1 Genbank gene 2819897 2820574 . + . ID=gene-PUW35_13715;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=PUW35_13715 CP118132.1 Protein Homology CDS 2819897 2820574 . + 0 ID=cds-WJG91743.1;Parent=gene-PUW35_13715;Dbxref=NCBI_GP:WJG91743.1;Name=WJG91743.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=PUW35_13715;product=DNA-binding transcriptional regulator CsiR;protein_id=WJG91743.1;transl_table=11 CP118132.1 Genbank gene 2820596 2821045 . - . ID=gene-PUW35_13720;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=PUW35_13720 CP118132.1 Protein Homology CDS 2820596 2821045 . - 0 ID=cds-WJG91744.1;Parent=gene-PUW35_13720;Dbxref=NCBI_GP:WJG91744.1;Name=WJG91744.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=PUW35_13720;product=peptidoglycan-binding protein LysM;protein_id=WJG91744.1;transl_table=11 CP118132.1 Genbank gene 2821145 2821303 . - . ID=gene-PUW35_13725;Name=PUW35_13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13725 CP118132.1 Protein Homology CDS 2821145 2821303 . - 0 ID=cds-WJG91745.1;Parent=gene-PUW35_13725;Dbxref=NCBI_GP:WJG91745.1;Name=WJG91745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=PUW35_13725;product=YqaE/Pmp3 family membrane protein;protein_id=WJG91745.1;transl_table=11 CP118132.1 Genbank gene 2821486 2821785 . + . ID=gene-PUW35_13730;Name=PUW35_13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13730 CP118132.1 Protein Homology CDS 2821486 2821785 . + 0 ID=cds-WJG91746.1;Parent=gene-PUW35_13730;Dbxref=NCBI_GP:WJG91746.1;Name=WJG91746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=PUW35_13730;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WJG91746.1;transl_table=11 CP118132.1 Genbank gene 2821795 2822322 . + . ID=gene-PUW35_13735;Name=PUW35_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13735 CP118132.1 Protein Homology CDS 2821795 2822322 . + 0 ID=cds-WJG91747.1;Parent=gene-PUW35_13735;Dbxref=NCBI_GP:WJG91747.1;Name=WJG91747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=PUW35_13735;product=rhodanese family protein;protein_id=WJG91747.1;transl_table=11 CP118132.1 Genbank gene 2822401 2822580 . + . ID=gene-PUW35_13740;Name=PUW35_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13740 CP118132.1 Protein Homology CDS 2822401 2822580 . + 0 ID=cds-WJG91748.1;Parent=gene-PUW35_13740;Dbxref=NCBI_GP:WJG91748.1;Name=WJG91748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=PUW35_13740;product=hypothetical protein;protein_id=WJG91748.1;transl_table=11 CP118132.1 Genbank pseudogene 2822670 2823071 . - . ID=gene-PUW35_13745;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=pseudogene;locus_tag=PUW35_13745;pseudo=true CP118132.1 Protein Homology CDS 2822670 2823071 . - 0 ID=cds-PUW35_13745;Parent=gene-PUW35_13745;Note=internal stop;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=PUW35_13745;product=DNA-binding protein StpA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2823769 2824218 . + . ID=gene-PUW35_13750;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=PUW35_13750 CP118132.1 Protein Homology CDS 2823769 2824218 . + 0 ID=cds-WJG91749.1;Parent=gene-PUW35_13750;Dbxref=NCBI_GP:WJG91749.1;Name=WJG91749.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=PUW35_13750;product=L-alanine exporter AlaE;protein_id=WJG91749.1;transl_table=11 CP118132.1 Genbank pseudogene 2824261 2824602 . - . ID=gene-PUW35_13755;Name=PUW35_13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13755;pseudo=true CP118132.1 Protein Homology CDS 2824261 2824602 . - 0 ID=cds-PUW35_13755;Parent=gene-PUW35_13755;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=PUW35_13755;product=DUF2002 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2824764 2825090 . + . ID=gene-PUW35_13760;Name=PUW35_13760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_13760;pseudo=true CP118132.1 Protein Homology CDS 2824764 2825090 . + 0 ID=cds-PUW35_13760;Parent=gene-PUW35_13760;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914293.1;locus_tag=PUW35_13760;product=DUF883 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2825174 2826508 . - . ID=gene-PUW35_13765;Name=PUW35_13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13765 CP118132.1 Protein Homology CDS 2825174 2826508 . - 0 ID=cds-WJG91750.1;Parent=gene-PUW35_13765;Dbxref=NCBI_GP:WJG91750.1;Name=WJG91750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=PUW35_13765;product=PLP-dependent aminotransferase family protein;protein_id=WJG91750.1;transl_table=11 CP118132.1 Genbank gene 2826597 2827028 . + . ID=gene-PUW35_13770;Name=PUW35_13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13770 CP118132.1 Protein Homology CDS 2826597 2827028 . + 0 ID=cds-WJG95109.1;Parent=gene-PUW35_13770;Dbxref=NCBI_GP:WJG95109.1;Name=WJG95109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=PUW35_13770;product=carboxymuconolactone decarboxylase family protein;protein_id=WJG95109.1;transl_table=11 CP118132.1 Genbank gene 2827300 2827545 . + . ID=gene-PUW35_13775;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=PUW35_13775 CP118132.1 Protein Homology CDS 2827300 2827545 . + 0 ID=cds-WJG91751.1;Parent=gene-PUW35_13775;Dbxref=NCBI_GP:WJG91751.1;Name=WJG91751.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=PUW35_13775;product=glutaredoxin-like protein NrdH;protein_id=WJG91751.1;transl_table=11 CP118132.1 Genbank gene 2827542 2827949 . + . ID=gene-PUW35_13780;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=PUW35_13780 CP118132.1 Protein Homology CDS 2827542 2827949 . + 0 ID=cds-WJG91752.1;Parent=gene-PUW35_13780;Dbxref=NCBI_GP:WJG91752.1;Name=WJG91752.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=PUW35_13780;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WJG91752.1;transl_table=11 CP118132.1 Genbank gene 2827922 2830066 . + . ID=gene-PUW35_13785;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=PUW35_13785 CP118132.1 Protein Homology CDS 2827922 2830066 . + 0 ID=cds-WJG91753.1;Parent=gene-PUW35_13785;Dbxref=NCBI_GP:WJG91753.1;Name=WJG91753.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=PUW35_13785;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WJG91753.1;transl_table=11 CP118132.1 Genbank gene 2830077 2831036 . + . ID=gene-PUW35_13790;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=PUW35_13790 CP118132.1 Protein Homology CDS 2830077 2831036 . + 0 ID=cds-WJG91754.1;Parent=gene-PUW35_13790;Dbxref=NCBI_GP:WJG91754.1;Name=WJG91754.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=PUW35_13790;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WJG91754.1;transl_table=11 CP118132.1 Genbank gene 2831391 2832593 . + . ID=gene-PUW35_13795;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=PUW35_13795 CP118132.1 Protein Homology CDS 2831391 2832593 . + 0 ID=cds-WJG91755.1;Parent=gene-PUW35_13795;Dbxref=NCBI_GP:WJG91755.1;Name=WJG91755.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=PUW35_13795;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WJG91755.1;transl_table=11 CP118132.1 Genbank gene 2832586 2833650 . + . ID=gene-PUW35_13800;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=PUW35_13800 CP118132.1 Protein Homology CDS 2832586 2833650 . + 0 ID=cds-WJG91756.1;Parent=gene-PUW35_13800;Dbxref=NCBI_GP:WJG91756.1;Name=WJG91756.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=PUW35_13800;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WJG91756.1;transl_table=11 CP118132.1 Genbank gene 2833720 2834715 . + . ID=gene-PUW35_13805;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=PUW35_13805 CP118132.1 Protein Homology CDS 2833720 2834715 . + 0 ID=cds-WJG91757.1;Parent=gene-PUW35_13805;Dbxref=NCBI_GP:WJG91757.1;Name=WJG91757.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=PUW35_13805;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WJG91757.1;transl_table=11 CP118132.1 Genbank gene 2834880 2836064 . + . ID=gene-PUW35_13810;Name=PUW35_13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13810 CP118132.1 Protein Homology CDS 2834880 2836064 . + 0 ID=cds-WJG91758.1;Parent=gene-PUW35_13810;Dbxref=NCBI_GP:WJG91758.1;Name=WJG91758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=PUW35_13810;product=MFS transporter;protein_id=WJG91758.1;transl_table=11 CP118132.1 Genbank gene 2836561 2837091 . + . ID=gene-PUW35_13815;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=PUW35_13815 CP118132.1 Protein Homology CDS 2836561 2837091 . + 0 ID=cds-WJG91759.1;Parent=gene-PUW35_13815;Dbxref=NCBI_GP:WJG91759.1;Name=WJG91759.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=PUW35_13815;product=transcriptional repressor MprA;protein_id=WJG91759.1;transl_table=11 CP118132.1 Genbank gene 2837218 2838390 . + . ID=gene-PUW35_13820;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=PUW35_13820 CP118132.1 Protein Homology CDS 2837218 2838390 . + 0 ID=cds-WJG91760.1;Parent=gene-PUW35_13820;Dbxref=NCBI_GP:WJG91760.1;Name=WJG91760.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=PUW35_13820;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WJG91760.1;transl_table=11 CP118132.1 Genbank pseudogene 2838407 2839944 . + . ID=gene-PUW35_13825;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=PUW35_13825;pseudo=true CP118132.1 Protein Homology CDS 2838407 2839944 . + 0 ID=cds-PUW35_13825;Parent=gene-PUW35_13825;Note=frameshifted;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=PUW35_13825;product=multidrug efflux MFS transporter permease subunit EmrB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2839993 2841363 . - . ID=gene-PUW35_13830;Name=PUW35_13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13830 CP118132.1 Protein Homology CDS 2839993 2841363 . - 0 ID=cds-WJG91761.1;Parent=gene-PUW35_13830;Dbxref=NCBI_GP:WJG91761.1;Name=WJG91761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=PUW35_13830;product=carbohydrate porin;protein_id=WJG91761.1;transl_table=11 CP118132.1 Genbank gene 2841708 2842223 . - . ID=gene-PUW35_13835;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=PUW35_13835 CP118132.1 Protein Homology CDS 2841708 2842223 . - 0 ID=cds-WJG91762.1;Parent=gene-PUW35_13835;Dbxref=NCBI_GP:WJG91762.1;Name=WJG91762.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=PUW35_13835;product=S-ribosylhomocysteine lyase;protein_id=WJG91762.1;transl_table=11 CP118132.1 Genbank gene 2842373 2843929 . - . ID=gene-PUW35_13840;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=PUW35_13840 CP118132.1 Protein Homology CDS 2842373 2843929 . - 0 ID=cds-WJG91763.1;Parent=gene-PUW35_13840;Dbxref=NCBI_GP:WJG91763.1;Name=WJG91763.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=PUW35_13840;product=glutamate--cysteine ligase;protein_id=WJG91763.1;transl_table=11 CP118132.1 Genbank gene 2844006 2844431 . - . ID=gene-PUW35_13845;Name=PUW35_13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13845 CP118132.1 Protein Homology CDS 2844006 2844431 . - 0 ID=cds-WJG91764.1;Parent=gene-PUW35_13845;Dbxref=NCBI_GP:WJG91764.1;Name=WJG91764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=PUW35_13845;product=DedA family protein;protein_id=WJG91764.1;transl_table=11 CP118132.1 Genbank pseudogene 2844428 2844993 . - . ID=gene-PUW35_13850;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=pseudogene;locus_tag=PUW35_13850;pseudo=true CP118132.1 Protein Homology CDS 2844428 2844993 . - 0 ID=cds-PUW35_13850;Parent=gene-PUW35_13850;Note=frameshifted;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=PUW35_13850;product=fructose-1-phosphate/6-phosphogluconate phosphatase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2845230 2845306 . - . ID=gene-PUW35_13855;Name=PUW35_13855;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_13855 CP118132.1 tRNAscan-SE tRNA 2845230 2845306 . - . ID=rna-PUW35_13855;Parent=gene-PUW35_13855;anticodon=(pos:complement(2845270..2845272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13855;product=tRNA-Arg CP118132.1 tRNAscan-SE exon 2845230 2845306 . - . ID=exon-PUW35_13855-1;Parent=rna-PUW35_13855;anticodon=(pos:complement(2845270..2845272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13855;product=tRNA-Arg CP118132.1 Genbank gene 2845500 2845576 . - . ID=gene-PUW35_13860;Name=PUW35_13860;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_13860 CP118132.1 tRNAscan-SE tRNA 2845500 2845576 . - . ID=rna-PUW35_13860;Parent=gene-PUW35_13860;anticodon=(pos:complement(2845540..2845542));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13860;product=tRNA-Arg CP118132.1 tRNAscan-SE exon 2845500 2845576 . - . ID=exon-PUW35_13860-1;Parent=rna-PUW35_13860;anticodon=(pos:complement(2845540..2845542));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13860;product=tRNA-Arg CP118132.1 Genbank gene 2845639 2845715 . - . ID=gene-PUW35_13865;Name=PUW35_13865;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_13865 CP118132.1 tRNAscan-SE tRNA 2845639 2845715 . - . ID=rna-PUW35_13865;Parent=gene-PUW35_13865;anticodon=(pos:complement(2845679..2845681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13865;product=tRNA-Arg CP118132.1 tRNAscan-SE exon 2845639 2845715 . - . ID=exon-PUW35_13865-1;Parent=rna-PUW35_13865;anticodon=(pos:complement(2845679..2845681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13865;product=tRNA-Arg CP118132.1 Genbank gene 2845719 2845810 . - . ID=gene-PUW35_13870;Name=PUW35_13870;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_13870 CP118132.1 tRNAscan-SE tRNA 2845719 2845810 . - . ID=rna-PUW35_13870;Parent=gene-PUW35_13870;anticodon=(pos:complement(2845774..2845776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13870;product=tRNA-Ser CP118132.1 tRNAscan-SE exon 2845719 2845810 . - . ID=exon-PUW35_13870-1;Parent=rna-PUW35_13870;anticodon=(pos:complement(2845774..2845776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_13870;product=tRNA-Ser CP118132.1 Genbank gene 2846114 2846299 . - . ID=gene-PUW35_13875;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=PUW35_13875 CP118132.1 Protein Homology CDS 2846114 2846299 . - 0 ID=cds-WJG91765.1;Parent=gene-PUW35_13875;Dbxref=NCBI_GP:WJG91765.1;Name=WJG91765.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=PUW35_13875;product=carbon storage regulator CsrA;protein_id=WJG91765.1;transl_table=11 CP118132.1 Genbank gene 2846534 2849164 . - . ID=gene-PUW35_13880;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=PUW35_13880 CP118132.1 Protein Homology CDS 2846534 2849164 . - 0 ID=cds-WJG91766.1;Parent=gene-PUW35_13880;Dbxref=NCBI_GP:WJG91766.1;Name=WJG91766.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=PUW35_13880;product=alanine--tRNA ligase;protein_id=WJG91766.1;transl_table=11 CP118132.1 Genbank gene 2849400 2849900 . - . ID=gene-PUW35_13885;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=PUW35_13885 CP118132.1 Protein Homology CDS 2849400 2849900 . - 0 ID=cds-WJG91767.1;Parent=gene-PUW35_13885;Dbxref=NCBI_GP:WJG91767.1;Name=WJG91767.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=PUW35_13885;product=recombination regulator RecX;protein_id=WJG91767.1;transl_table=11 CP118132.1 Genbank gene 2850017 2851078 . - . ID=gene-PUW35_13890;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=PUW35_13890 CP118132.1 Protein Homology CDS 2850017 2851078 . - 0 ID=cds-WJG91768.1;Parent=gene-PUW35_13890;Dbxref=NCBI_GP:WJG91768.1;Name=WJG91768.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=PUW35_13890;product=recombinase RecA;protein_id=WJG91768.1;transl_table=11 CP118132.1 Genbank gene 2851163 2851660 . - . ID=gene-PUW35_13895;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=PUW35_13895 CP118132.1 Protein Homology CDS 2851163 2851660 . - 0 ID=cds-WJG95110.1;Parent=gene-PUW35_13895;Dbxref=NCBI_GP:WJG95110.1;Name=WJG95110.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=PUW35_13895;product=nicotinamide-nucleotide amidase;protein_id=WJG95110.1;transl_table=11 CP118132.1 Genbank gene 2851856 2852101 . + . ID=gene-PUW35_13900;Name=PUW35_13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13900 CP118132.1 Protein Homology CDS 2851856 2852101 . + 0 ID=cds-WJG91769.1;Parent=gene-PUW35_13900;Dbxref=NCBI_GP:WJG91769.1;Name=WJG91769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=PUW35_13900;product=hypothetical protein;protein_id=WJG91769.1;transl_table=11 CP118132.1 Genbank gene 2852139 2853218 . - . ID=gene-PUW35_13905;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=PUW35_13905 CP118132.1 Protein Homology CDS 2852139 2853218 . - 0 ID=cds-WJG91770.1;Parent=gene-PUW35_13905;Dbxref=NCBI_GP:WJG91770.1;Name=WJG91770.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=PUW35_13905;product=lytic murein transglycosylase B;protein_id=WJG91770.1;transl_table=11 CP118132.1 Genbank gene 2853472 2854035 . + . ID=gene-PUW35_13910;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=PUW35_13910 CP118132.1 Protein Homology CDS 2853472 2854035 . + 0 ID=cds-WJG91771.1;Parent=gene-PUW35_13910;Dbxref=NCBI_GP:WJG91771.1;Name=WJG91771.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=PUW35_13910;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WJG91771.1;transl_table=11 CP118132.1 Genbank gene 2854032 2855003 . + . ID=gene-PUW35_13915;Name=PUW35_13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13915 CP118132.1 Protein Homology CDS 2854032 2855003 . + 0 ID=cds-WJG91772.1;Parent=gene-PUW35_13915;Dbxref=NCBI_GP:WJG91772.1;Name=WJG91772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=PUW35_13915;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WJG91772.1;transl_table=11 CP118132.1 Genbank gene 2855015 2855377 . + . ID=gene-PUW35_13920;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=PUW35_13920 CP118132.1 Protein Homology CDS 2855015 2855377 . + 0 ID=cds-WJG91773.1;Parent=gene-PUW35_13920;Dbxref=NCBI_GP:WJG91773.1;Name=WJG91773.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=PUW35_13920;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WJG91773.1;transl_table=11 CP118132.1 Genbank gene 2855389 2856168 . + . ID=gene-PUW35_13925;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=PUW35_13925 CP118132.1 Protein Homology CDS 2855389 2856168 . + 0 ID=cds-WJG91774.1;Parent=gene-PUW35_13925;Dbxref=NCBI_GP:WJG91774.1;Name=WJG91774.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=PUW35_13925;product=sorbitol-6-phosphate dehydrogenase;protein_id=WJG91774.1;transl_table=11 CP118132.1 Genbank gene 2856245 2856604 . + . ID=gene-PUW35_13930;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=PUW35_13930 CP118132.1 Protein Homology CDS 2856245 2856604 . + 0 ID=cds-WJG91775.1;Parent=gene-PUW35_13930;Dbxref=NCBI_GP:WJG91775.1;Name=WJG91775.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=PUW35_13930;product=transcriptional regulator GutM;protein_id=WJG91775.1;transl_table=11 CP118132.1 Genbank gene 2856802 2857575 . + . ID=gene-PUW35_13935;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=PUW35_13935 CP118132.1 Protein Homology CDS 2856802 2857575 . + 0 ID=cds-WJG91776.1;Parent=gene-PUW35_13935;Dbxref=NCBI_GP:WJG91776.1;Name=WJG91776.1;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=PUW35_13935;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WJG91776.1;transl_table=11 CP118132.1 Genbank gene 2857568 2858533 . + . ID=gene-PUW35_13940;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=PUW35_13940 CP118132.1 Protein Homology CDS 2857568 2858533 . + 0 ID=cds-WJG91777.1;Parent=gene-PUW35_13940;Dbxref=NCBI_GP:WJG91777.1;Name=WJG91777.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=PUW35_13940;product=arabinose-5-phosphate isomerase GutQ;protein_id=WJG91777.1;transl_table=11 CP118132.1 Genbank pseudogene 2858530 2860049 . - . ID=gene-PUW35_13945;Name=norR;gbkey=Gene;gene=norR;gene_biotype=pseudogene;locus_tag=PUW35_13945;pseudo=true CP118132.1 Protein Homology CDS 2858530 2860049 . - 0 ID=cds-PUW35_13945;Parent=gene-PUW35_13945;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=PUW35_13945;product=nitric oxide reductase transcriptional regulator NorR;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2860235 2861668 . + . ID=gene-PUW35_13950;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=PUW35_13950 CP118132.1 Protein Homology CDS 2860235 2861668 . + 0 ID=cds-WJG91778.1;Parent=gene-PUW35_13950;Dbxref=NCBI_GP:WJG91778.1;Name=WJG91778.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=PUW35_13950;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WJG91778.1;transl_table=11 CP118132.1 Genbank gene 2861665 2862798 . + . ID=gene-PUW35_13955;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=PUW35_13955 CP118132.1 Protein Homology CDS 2861665 2862798 . + 0 ID=cds-WJG91779.1;Parent=gene-PUW35_13955;Dbxref=NCBI_GP:WJG91779.1;Name=WJG91779.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=PUW35_13955;product=NADH:flavorubredoxin reductase NorW;protein_id=WJG91779.1;transl_table=11 CP118132.1 Genbank gene 2862895 2865135 . - . ID=gene-PUW35_13960;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=PUW35_13960 CP118132.1 Protein Homology CDS 2862895 2865135 . - 0 ID=cds-WJG91780.1;Parent=gene-PUW35_13960;Dbxref=NCBI_GP:WJG91780.1;Name=WJG91780.1;Ontology_term=GO:0036211,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=PUW35_13960;product=carbamoyltransferase HypF;protein_id=WJG91780.1;transl_table=11 CP118132.1 Genbank gene 2865281 2865826 . - . ID=gene-PUW35_13965;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=PUW35_13965 CP118132.1 Protein Homology CDS 2865281 2865826 . - 0 ID=cds-WJG91781.1;Parent=gene-PUW35_13965;Dbxref=NCBI_GP:WJG91781.1;Name=WJG91781.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=PUW35_13965;product=electron transport protein HydN;protein_id=WJG91781.1;transl_table=11 CP118132.1 Genbank gene 2866027 2866836 . - . ID=gene-PUW35_13970;Name=PUW35_13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13970 CP118132.1 Protein Homology CDS 2866027 2866836 . - 0 ID=cds-WJG91782.1;Parent=gene-PUW35_13970;Dbxref=NCBI_GP:WJG91782.1;Name=WJG91782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=PUW35_13970;product=hypothetical protein;protein_id=WJG91782.1;transl_table=11 CP118132.1 Genbank gene 2866863 2867333 . - . ID=gene-PUW35_13975;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=PUW35_13975 CP118132.1 Protein Homology CDS 2866863 2867333 . - 0 ID=cds-WJG91783.1;Parent=gene-PUW35_13975;Dbxref=NCBI_GP:WJG91783.1;Name=WJG91783.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=PUW35_13975;product=hydrogenase maturation peptidase HycI;protein_id=WJG91783.1;transl_table=11 CP118132.1 Genbank gene 2867326 2867736 . - . ID=gene-PUW35_13980;Name=PUW35_13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_13980 CP118132.1 Protein Homology CDS 2867326 2867736 . - 0 ID=cds-WJG91784.1;Parent=gene-PUW35_13980;Dbxref=NCBI_GP:WJG91784.1;Name=WJG91784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=PUW35_13980;product=formate hydrogenlyase maturation HycH family protein;protein_id=WJG91784.1;transl_table=11 CP118132.1 Genbank pseudogene 2867733 2868499 . - . ID=gene-PUW35_13985;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=pseudogene;locus_tag=PUW35_13985;pseudo=true CP118132.1 Protein Homology CDS 2867733 2868499 . - 0 ID=cds-PUW35_13985;Parent=gene-PUW35_13985;Note=frameshifted;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=PUW35_13985;product=formate hydrogenlyase subunit HycG;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2868499 2869041 . - . ID=gene-PUW35_13990;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=PUW35_13990 CP118132.1 Protein Homology CDS 2868499 2869041 . - 0 ID=cds-WJG91785.1;Parent=gene-PUW35_13990;Dbxref=NCBI_GP:WJG91785.1;Name=WJG91785.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=PUW35_13990;product=formate hydrogenlyase subunit HycF;protein_id=WJG91785.1;transl_table=11 CP118132.1 Genbank gene 2869051 2870736 . - . ID=gene-PUW35_13995;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=PUW35_13995 CP118132.1 Protein Homology CDS 2869051 2870736 . - 0 ID=cds-WJG91786.1;Parent=gene-PUW35_13995;Dbxref=NCBI_GP:WJG91786.1;Name=WJG91786.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=PUW35_13995;product=formate hydrogenlyase subunit HycE;protein_id=WJG91786.1;transl_table=11 CP118132.1 Genbank gene 2870754 2871677 . - . ID=gene-PUW35_14000;Name=PUW35_14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14000 CP118132.1 Protein Homology CDS 2870754 2871677 . - 0 ID=cds-WJG91787.1;Parent=gene-PUW35_14000;Dbxref=NCBI_GP:WJG91787.1;Name=WJG91787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=PUW35_14000;product=respiratory chain complex I subunit 1 family protein;protein_id=WJG91787.1;transl_table=11 CP118132.1 Genbank gene 2871680 2873506 . - . ID=gene-PUW35_14005;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=PUW35_14005 CP118132.1 Protein Homology CDS 2871680 2873506 . - 0 ID=cds-WJG91788.1;Parent=gene-PUW35_14005;Dbxref=NCBI_GP:WJG91788.1;Name=WJG91788.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=PUW35_14005;product=formate hydrogenlyase subunit 3;protein_id=WJG91788.1;transl_table=11 CP118132.1 Genbank gene 2873506 2874114 . - . ID=gene-PUW35_14010;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=PUW35_14010 CP118132.1 Protein Homology CDS 2873506 2874114 . - 0 ID=cds-WJG91789.1;Parent=gene-PUW35_14010;Dbxref=NCBI_GP:WJG91789.1;Name=WJG91789.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=PUW35_14010;product=formate hydrogenlyase subunit HycB;protein_id=WJG91789.1;transl_table=11 CP118132.1 Genbank gene 2874260 2874721 . - . ID=gene-PUW35_14015;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=PUW35_14015 CP118132.1 Protein Homology CDS 2874260 2874721 . - 0 ID=cds-WJG91790.1;Parent=gene-PUW35_14015;Dbxref=NCBI_GP:WJG91790.1;Name=WJG91790.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=PUW35_14015;product=formate hydrogenlyase regulator HycA;protein_id=WJG91790.1;transl_table=11 CP118132.1 Genbank gene 2874931 2875287 . + . ID=gene-PUW35_14020;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW35_14020 CP118132.1 Protein Homology CDS 2874931 2875287 . + 0 ID=cds-WJG91791.1;Parent=gene-PUW35_14020;Dbxref=NCBI_GP:WJG91791.1;Name=WJG91791.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=PUW35_14020;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJG91791.1;transl_table=11 CP118132.1 Genbank gene 2875356 2876228 . + . ID=gene-PUW35_14025;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=PUW35_14025 CP118132.1 Protein Homology CDS 2875356 2876228 . + 0 ID=cds-WJG91792.1;Parent=gene-PUW35_14025;Dbxref=NCBI_GP:WJG91792.1;Name=WJG91792.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=PUW35_14025;product=hydrogenase nickel incorporation protein HypB;protein_id=WJG91792.1;transl_table=11 CP118132.1 Genbank gene 2876219 2876491 . + . ID=gene-PUW35_14030;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=PUW35_14030 CP118132.1 Protein Homology CDS 2876219 2876491 . + 0 ID=cds-WJG91793.1;Parent=gene-PUW35_14030;Dbxref=NCBI_GP:WJG91793.1;Name=WJG91793.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=PUW35_14030;product=hydrogenase 3 maturation protein HypC;protein_id=WJG91793.1;transl_table=11 CP118132.1 Genbank gene 2876491 2877612 . + . ID=gene-PUW35_14035;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=PUW35_14035 CP118132.1 Protein Homology CDS 2876491 2877612 . + 0 ID=cds-WJG91794.1;Parent=gene-PUW35_14035;Dbxref=NCBI_GP:WJG91794.1;Name=WJG91794.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=PUW35_14035;product=hydrogenase formation protein HypD;protein_id=WJG91794.1;transl_table=11 CP118132.1 Genbank gene 2877609 2878619 . + . ID=gene-PUW35_14040;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=PUW35_14040 CP118132.1 Protein Homology CDS 2877609 2878619 . + 0 ID=cds-WJG91795.1;Parent=gene-PUW35_14040;Dbxref=NCBI_GP:WJG91795.1;Name=WJG91795.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=PUW35_14040;product=hydrogenase expression/formation protein HypE;protein_id=WJG91795.1;transl_table=11 CP118132.1 Genbank pseudogene 2878838 2880915 . + . ID=gene-PUW35_14045;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=pseudogene;locus_tag=PUW35_14045;pseudo=true CP118132.1 Protein Homology CDS 2878838 2880915 . + 0 ID=cds-PUW35_14045;Parent=gene-PUW35_14045;Note=frameshifted;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=PUW35_14045;product=formate hydrogenlyase transcriptional activator FlhA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2880977 2881321 . - . ID=gene-PUW35_14050;Name=PUW35_14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14050 CP118132.1 Protein Homology CDS 2880977 2881321 . - 0 ID=cds-WJG91796.1;Parent=gene-PUW35_14050;Dbxref=NCBI_GP:WJG91796.1;Name=WJG91796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=PUW35_14050;product=nitrous oxide-stimulated promoter family protein;protein_id=WJG91796.1;transl_table=11 CP118132.1 Genbank gene 2881503 2882420 . + . ID=gene-PUW35_14055;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=PUW35_14055 CP118132.1 Protein Homology CDS 2881503 2882420 . + 0 ID=cds-WJG91797.1;Parent=gene-PUW35_14055;Dbxref=NCBI_GP:WJG91797.1;Name=WJG91797.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=PUW35_14055;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WJG91797.1;transl_table=11 CP118132.1 Genbank gene 2882417 2883238 . + . ID=gene-PUW35_14060;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=PUW35_14060 CP118132.1 Protein Homology CDS 2882417 2883238 . + 0 ID=cds-WJG91798.1;Parent=gene-PUW35_14060;Dbxref=NCBI_GP:WJG91798.1;Name=WJG91798.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=PUW35_14060;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WJG91798.1;transl_table=11 CP118132.1 Genbank gene 2883235 2884095 . + . ID=gene-PUW35_14065;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=PUW35_14065 CP118132.1 Protein Homology CDS 2883235 2884095 . + 0 ID=cds-WJG91799.1;Parent=gene-PUW35_14065;Dbxref=NCBI_GP:WJG91799.1;Name=WJG91799.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=PUW35_14065;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WJG91799.1;transl_table=11 CP118132.1 Genbank pseudogene 2884086 2884933 . + . ID=gene-PUW35_14070;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=pseudogene;locus_tag=PUW35_14070;pseudo=true CP118132.1 Protein Homology CDS 2884086 2884933 . + 0 ID=cds-PUW35_14070;Parent=gene-PUW35_14070;Note=frameshifted;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=PUW35_14070;product=iron/manganese ABC transporter permease subunit SitD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2885032 2885940 . - . ID=gene-PUW35_14075;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=PUW35_14075 CP118132.1 Protein Homology CDS 2885032 2885940 . - 0 ID=cds-WJG91800.1;Parent=gene-PUW35_14075;Dbxref=NCBI_GP:WJG91800.1;Name=WJG91800.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576330.1;locus_tag=PUW35_14075;product=type III secretion system YopJ family effector AvrA;protein_id=WJG91800.1;transl_table=11 CP118132.1 Genbank gene 2886101 2886856 . - . ID=gene-PUW35_14080;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=PUW35_14080 CP118132.1 Protein Homology CDS 2886101 2886856 . - 0 ID=cds-WJG91801.1;Parent=gene-PUW35_14080;Dbxref=NCBI_GP:WJG91801.1;Name=WJG91801.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=PUW35_14080;product=transcriptional regulator SprB;protein_id=WJG91801.1;transl_table=11 CP118132.1 Genbank gene 2887241 2888128 . - . ID=gene-PUW35_14085;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=PUW35_14085 CP118132.1 Protein Homology CDS 2887241 2888128 . - 0 ID=cds-WJG91802.1;Parent=gene-PUW35_14085;Dbxref=NCBI_GP:WJG91802.1;Name=WJG91802.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=PUW35_14085;product=invasion transcriptional regulator HilC;protein_id=WJG91802.1;transl_table=11 CP118132.1 Genbank gene 2888473 2888925 . - . ID=gene-PUW35_14090;Name=PUW35_14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14090 CP118132.1 Protein Homology CDS 2888473 2888925 . - 0 ID=cds-WJG95111.1;Parent=gene-PUW35_14090;Dbxref=NCBI_GP:WJG95111.1;Name=WJG95111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=PUW35_14090;product=type III secretion system effector protein OrgC;protein_id=WJG95111.1;transl_table=11 CP118132.1 Genbank gene 2888922 2889602 . - . ID=gene-PUW35_14095;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=PUW35_14095 CP118132.1 Protein Homology CDS 2888922 2889602 . - 0 ID=cds-WJG91803.1;Parent=gene-PUW35_14095;Dbxref=NCBI_GP:WJG91803.1;Name=WJG91803.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=PUW35_14095;product=type III secretion system linker protein OrgB;protein_id=WJG91803.1;transl_table=11 CP118132.1 Genbank gene 2889559 2890158 . - . ID=gene-PUW35_14100;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=PUW35_14100 CP118132.1 Protein Homology CDS 2889559 2890158 . - 0 ID=cds-WJG91804.1;Parent=gene-PUW35_14100;Dbxref=NCBI_GP:WJG91804.1;Name=WJG91804.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=PUW35_14100;product=oxygen-regulated invasion protein OrgA;protein_id=WJG91804.1;transl_table=11 CP118132.1 Genbank gene 2890130 2890888 . - . ID=gene-PUW35_14105;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=PUW35_14105 CP118132.1 Protein Homology CDS 2890130 2890888 . - 0 ID=cds-WJG91805.1;Parent=gene-PUW35_14105;Dbxref=NCBI_GP:WJG91805.1;Name=WJG91805.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=PUW35_14105;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WJG91805.1;transl_table=11 CP118132.1 Genbank gene 2890885 2891190 . - . ID=gene-PUW35_14110;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=PUW35_14110 CP118132.1 Protein Homology CDS 2890885 2891190 . - 0 ID=cds-WJG91806.1;Parent=gene-PUW35_14110;Dbxref=NCBI_GP:WJG91806.1;Name=WJG91806.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=PUW35_14110;product=type III secretion system inner rod protein PrgJ;protein_id=WJG91806.1;transl_table=11 CP118132.1 Genbank gene 2891209 2891451 . - . ID=gene-PUW35_14115;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=PUW35_14115 CP118132.1 Protein Homology CDS 2891209 2891451 . - 0 ID=cds-WJG91807.1;Parent=gene-PUW35_14115;Dbxref=NCBI_GP:WJG91807.1;Name=WJG91807.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=PUW35_14115;product=type III secretion system needle filament protein PrgI;protein_id=WJG91807.1;transl_table=11 CP118132.1 Genbank gene 2891476 2892654 . - . ID=gene-PUW35_14120;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=PUW35_14120 CP118132.1 Protein Homology CDS 2891476 2892654 . - 0 ID=cds-WJG91808.1;Parent=gene-PUW35_14120;Dbxref=NCBI_GP:WJG91808.1;Name=WJG91808.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=PUW35_14120;product=type III secretion system inner membrane ring protein PrgH;protein_id=WJG91808.1;transl_table=11 CP118132.1 Genbank gene 2892970 2893899 . + . ID=gene-PUW35_14125;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=PUW35_14125 CP118132.1 Protein Homology CDS 2892970 2893899 . + 0 ID=cds-WJG91809.1;Parent=gene-PUW35_14125;Dbxref=NCBI_GP:WJG91809.1;Name=WJG91809.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=PUW35_14125;product=transcriptional regulator HilD;protein_id=WJG91809.1;transl_table=11 CP118132.1 Genbank gene 2894989 2896650 . + . ID=gene-PUW35_14130;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=PUW35_14130 CP118132.1 Protein Homology CDS 2894989 2896650 . + 0 ID=cds-WJG91810.1;Parent=gene-PUW35_14130;Dbxref=NCBI_GP:WJG91810.1;Name=WJG91810.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=PUW35_14130;product=transcriptional regulator HilA;protein_id=WJG91810.1;transl_table=11 CP118132.1 Genbank pseudogene 2896668 2897148 . + . ID=gene-PUW35_14135;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=pseudogene;locus_tag=PUW35_14135;pseudo=true CP118132.1 Protein Homology CDS 2896668 2897148 . + 0 ID=cds-PUW35_14135;Parent=gene-PUW35_14135;Note=frameshifted;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=PUW35_14135;product=SPI-1 type III secretion system invasion protein IagB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2897202 2898833 . - . ID=gene-PUW35_14140;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=PUW35_14140 CP118132.1 Protein Homology CDS 2897202 2898833 . - 0 ID=cds-WJG91811.1;Parent=gene-PUW35_14140;Dbxref=NCBI_GP:WJG91811.1;Name=WJG91811.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540778.1;locus_tag=PUW35_14140;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WJG91811.1;transl_table=11 CP118132.1 Genbank gene 2898820 2899212 . - . ID=gene-PUW35_14145;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=PUW35_14145 CP118132.1 Protein Homology CDS 2898820 2899212 . - 0 ID=cds-WJG91812.1;Parent=gene-PUW35_14145;Dbxref=NCBI_GP:WJG91812.1;Name=WJG91812.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=PUW35_14145;product=chaperone SicP;protein_id=WJG91812.1;transl_table=11 CP118132.1 Genbank gene 2899239 2899499 . - . ID=gene-PUW35_14150;Name=PUW35_14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14150 CP118132.1 Protein Homology CDS 2899239 2899499 . - 0 ID=cds-WJG91813.1;Parent=gene-PUW35_14150;Dbxref=NCBI_GP:WJG91813.1;Name=WJG91813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=PUW35_14150;product=hypothetical protein;protein_id=WJG91813.1;transl_table=11 CP118132.1 Genbank gene 2899543 2899791 . - . ID=gene-PUW35_14155;Name=PUW35_14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14155 CP118132.1 Protein Homology CDS 2899543 2899791 . - 0 ID=cds-WJG91814.1;Parent=gene-PUW35_14155;Dbxref=NCBI_GP:WJG91814.1;Name=WJG91814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=PUW35_14155;product=acyl carrier protein;protein_id=WJG91814.1;transl_table=11 CP118132.1 Genbank gene 2899810 2901867 . - . ID=gene-PUW35_14160;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=PUW35_14160 CP118132.1 Protein Homology CDS 2899810 2901867 . - 0 ID=cds-WJG91815.1;Parent=gene-PUW35_14160;Dbxref=NCBI_GP:WJG91815.1;Name=WJG91815.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=PUW35_14160;product=SPI-1 type III secretion system effector SipA;protein_id=WJG91815.1;transl_table=11 CP118132.1 Genbank gene 2901886 2902917 . - . ID=gene-PUW35_14165;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=PUW35_14165 CP118132.1 Protein Homology CDS 2901886 2902917 . - 0 ID=cds-WJG91816.1;Parent=gene-PUW35_14165;Dbxref=NCBI_GP:WJG91816.1;Name=WJG91816.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=PUW35_14165;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WJG91816.1;transl_table=11 CP118132.1 Genbank pseudogene 2902988 2904216 . - . ID=gene-PUW35_14170;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=pseudogene;locus_tag=PUW35_14170;pseudo=true CP118132.1 Protein Homology CDS 2902988 2904216 . - 0 ID=cds-PUW35_14170;Parent=gene-PUW35_14170;Note=frameshifted;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=PUW35_14170;product=SPI-1 type III secretion system needle tip complex protein SipC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2904244 2906025 . - . ID=gene-PUW35_14175;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=PUW35_14175 CP118132.1 Protein Homology CDS 2904244 2906025 . - 0 ID=cds-WJG91817.1;Parent=gene-PUW35_14175;Dbxref=NCBI_GP:WJG91817.1;Name=WJG91817.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=PUW35_14175;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WJG91817.1;transl_table=11 CP118132.1 Genbank gene 2906028 2906525 . - . ID=gene-PUW35_14180;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=PUW35_14180 CP118132.1 Protein Homology CDS 2906028 2906525 . - 0 ID=cds-WJG91818.1;Parent=gene-PUW35_14180;Dbxref=NCBI_GP:WJG91818.1;Name=WJG91818.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=PUW35_14180;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WJG91818.1;transl_table=11 CP118132.1 Genbank pseudogene 2906663 2907732 . - . ID=gene-PUW35_14185;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=pseudogene;locus_tag=PUW35_14185;pseudo=true CP118132.1 Protein Homology CDS 2906663 2907732 . - 0 ID=cds-PUW35_14185;Parent=gene-PUW35_14185;Note=frameshifted;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=PUW35_14185;product=SPI-1 type III secretion system export apparatus protein SpaS;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2907719 2908510 . - . ID=gene-PUW35_14190;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=PUW35_14190 CP118132.1 Protein Homology CDS 2907719 2908510 . - 0 ID=cds-WJG91819.1;Parent=gene-PUW35_14190;Dbxref=NCBI_GP:WJG91819.1;Name=WJG91819.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=PUW35_14190;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WJG91819.1;transl_table=11 CP118132.1 Genbank gene 2908514 2908774 . - . ID=gene-PUW35_14195;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=PUW35_14195 CP118132.1 Protein Homology CDS 2908514 2908774 . - 0 ID=cds-WJG91820.1;Parent=gene-PUW35_14195;Dbxref=NCBI_GP:WJG91820.1;Name=WJG91820.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=PUW35_14195;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WJG91820.1;transl_table=11 CP118132.1 Genbank gene 2908800 2909474 . - . ID=gene-PUW35_14200;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=PUW35_14200 CP118132.1 Protein Homology CDS 2908800 2909474 . - 0 ID=cds-WJG91821.1;Parent=gene-PUW35_14200;Dbxref=NCBI_GP:WJG91821.1;Name=WJG91821.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=PUW35_14200;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WJG91821.1;transl_table=11 CP118132.1 Genbank gene 2909464 2910375 . - . ID=gene-PUW35_14205;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=PUW35_14205 CP118132.1 Protein Homology CDS 2909464 2910375 . - 0 ID=cds-WJG91822.1;Parent=gene-PUW35_14205;Dbxref=NCBI_GP:WJG91822.1;Name=WJG91822.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=PUW35_14205;product=SPI-1 type III secretion system protein SpaO;protein_id=WJG91822.1;transl_table=11 CP118132.1 Genbank gene 2910375 2911385 . - . ID=gene-PUW35_14210;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=PUW35_14210 CP118132.1 Protein Homology CDS 2910375 2911385 . - 0 ID=cds-WJG91823.1;Parent=gene-PUW35_14210;Dbxref=NCBI_GP:WJG91823.1;Name=WJG91823.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=PUW35_14210;product=SPI-1 type III secretion system protein SpaN;protein_id=WJG91823.1;transl_table=11 CP118132.1 Genbank gene 2911385 2911828 . - . ID=gene-PUW35_14215;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=PUW35_14215 CP118132.1 Protein Homology CDS 2911385 2911828 . - 0 ID=cds-WJG91824.1;Parent=gene-PUW35_14215;Dbxref=NCBI_GP:WJG91824.1;Name=WJG91824.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=PUW35_14215;product=SPI-1 type III secretion system protein SpaM;protein_id=WJG91824.1;transl_table=11 CP118132.1 Genbank gene 2911806 2913101 . - . ID=gene-PUW35_14220;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=PUW35_14220 CP118132.1 Protein Homology CDS 2911806 2913101 . - 0 ID=cds-WJG91825.1;Parent=gene-PUW35_14220;Dbxref=NCBI_GP:WJG91825.1;Name=WJG91825.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=PUW35_14220;product=SctN family type III secretion system ATPase InvC;protein_id=WJG91825.1;transl_table=11 CP118132.1 Genbank pseudogene 2913098 2913504 . - . ID=gene-PUW35_14225;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=pseudogene;locus_tag=PUW35_14225;pseudo=true CP118132.1 Protein Homology CDS 2913098 2913504 . - 0 ID=cds-PUW35_14225;Parent=gene-PUW35_14225;Note=frameshifted;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=PUW35_14225;product=SPI-1 type III secretion system chaperone SpaK;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2913528 2915585 . - . ID=gene-PUW35_14230;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=PUW35_14230 CP118132.1 Protein Homology CDS 2913528 2915585 . - 0 ID=cds-WJG91826.1;Parent=gene-PUW35_14230;Dbxref=NCBI_GP:WJG91826.1;Name=WJG91826.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=PUW35_14230;product=type III secretion system export apparatus protein InvA;protein_id=WJG91826.1;transl_table=11 CP118132.1 Genbank gene 2915610 2916728 . - . ID=gene-PUW35_14235;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=PUW35_14235 CP118132.1 Protein Homology CDS 2915610 2916728 . - 0 ID=cds-WJG91827.1;Parent=gene-PUW35_14235;Dbxref=NCBI_GP:WJG91827.1;Name=WJG91827.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=PUW35_14235;product=type III secretion system gatekeeper InvE;protein_id=WJG91827.1;transl_table=11 CP118132.1 Genbank gene 2916725 2918413 . - . ID=gene-PUW35_14240;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=PUW35_14240 CP118132.1 Protein Homology CDS 2916725 2918413 . - 0 ID=cds-WJG91828.1;Parent=gene-PUW35_14240;Dbxref=NCBI_GP:WJG91828.1;Name=WJG91828.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=PUW35_14240;product=type III secretion system outer membrane ring protein InvG;protein_id=WJG91828.1;transl_table=11 CP118132.1 Genbank pseudogene 2918410 2919059 . - . ID=gene-PUW35_14245;Name=invF;gbkey=Gene;gene=invF;gene_biotype=pseudogene;locus_tag=PUW35_14245;pseudo=true CP118132.1 Protein Homology CDS 2918410 2919059 . - 0 ID=cds-PUW35_14245;Parent=gene-PUW35_14245;Note=frameshifted;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=PUW35_14245;product=type III secretion system transcriptional activator InvF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2919515 2919958 . + . ID=gene-PUW35_14250;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=PUW35_14250 CP118132.1 Protein Homology CDS 2919515 2919958 . + 0 ID=cds-WJG91829.1;Parent=gene-PUW35_14250;Dbxref=NCBI_GP:WJG91829.1;Name=WJG91829.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=PUW35_14250;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WJG91829.1;transl_table=11 CP118132.1 Genbank pseudogene 2920362 2920551 . + . ID=gene-PUW35_14255;Name=PUW35_14255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_14255;pseudo=true CP118132.1 Protein Homology CDS 2920362 2920551 . + 0 ID=cds-PUW35_14255;Parent=gene-PUW35_14255;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=PUW35_14255;product=IS3 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2920821 2921111 . + . ID=gene-PUW35_14260;Name=PUW35_14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14260 CP118132.1 Protein Homology CDS 2920821 2921111 . + 0 ID=cds-WJG91830.1;Parent=gene-PUW35_14260;Dbxref=NCBI_GP:WJG91830.1;Name=WJG91830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=PUW35_14260;product=DUF1778 domain-containing protein;protein_id=WJG91830.1;transl_table=11 CP118132.1 Genbank gene 2921108 2921635 . + . ID=gene-PUW35_14265;Name=PUW35_14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14265 CP118132.1 Protein Homology CDS 2921108 2921635 . + 0 ID=cds-WJG91831.1;Parent=gene-PUW35_14265;Dbxref=NCBI_GP:WJG91831.1;Name=WJG91831.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=PUW35_14265;product=GNAT family N-acetyltransferase;protein_id=WJG91831.1;transl_table=11 CP118132.1 Genbank pseudogene 2921708 2921913 . - . ID=gene-PUW35_14270;Name=PUW35_14270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_14270;pseudo=true CP118132.1 Protein Homology CDS 2921708 2921913 . - 0 ID=cds-PUW35_14270;Parent=gene-PUW35_14270;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=PUW35_14270;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2922272 2922928 . + . ID=gene-PUW35_14275;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=PUW35_14275 CP118132.1 Protein Homology CDS 2922272 2922928 . + 0 ID=cds-WJG91832.1;Parent=gene-PUW35_14275;Dbxref=NCBI_GP:WJG91832.1;Name=WJG91832.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=PUW35_14275;product=protein-serine/threonine phosphatase;protein_id=WJG91832.1;transl_table=11 CP118132.1 Genbank gene 2923173 2923667 . - . ID=gene-PUW35_14280;Name=PUW35_14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14280 CP118132.1 Protein Homology CDS 2923173 2923667 . - 0 ID=cds-WJG91833.1;Parent=gene-PUW35_14280;Dbxref=NCBI_GP:WJG91833.1;Name=WJG91833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424949.1;locus_tag=PUW35_14280;product=hypothetical protein;protein_id=WJG91833.1;transl_table=11 CP118132.1 Genbank gene 2923694 2924362 . - . ID=gene-PUW35_14285;Name=PUW35_14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14285 CP118132.1 Protein Homology CDS 2923694 2924362 . - 0 ID=cds-WJG91834.1;Parent=gene-PUW35_14285;Dbxref=NCBI_GP:WJG91834.1;Name=WJG91834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445913.1;locus_tag=PUW35_14285;product=hypothetical protein;protein_id=WJG91834.1;transl_table=11 CP118132.1 Genbank pseudogene 2924948 2925346 . - . ID=gene-PUW35_14290;Name=PUW35_14290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_14290;pseudo=true CP118132.1 Protein Homology CDS 2924948 2925346 . - 0 ID=cds-PUW35_14290;Parent=gene-PUW35_14290;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=PUW35_14290;product=cytoplasmic protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2925505 2928072 . + . ID=gene-PUW35_14295;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=PUW35_14295 CP118132.1 Protein Homology CDS 2925505 2928072 . + 0 ID=cds-WJG91835.1;Parent=gene-PUW35_14295;Dbxref=NCBI_GP:WJG91835.1;Name=WJG91835.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=PUW35_14295;product=DNA mismatch repair protein MutS;protein_id=WJG91835.1;transl_table=11 CP118132.1 Genbank gene 2928115 2928495 . - . ID=gene-PUW35_14300;Name=PUW35_14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14300 CP118132.1 Protein Homology CDS 2928115 2928495 . - 0 ID=cds-WJG91836.1;Parent=gene-PUW35_14300;Dbxref=NCBI_GP:WJG91836.1;Name=WJG91836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=PUW35_14300;product=DUF4440 domain-containing protein;protein_id=WJG91836.1;transl_table=11 CP118132.1 Genbank gene 2928492 2929700 . - . ID=gene-PUW35_14305;Name=PUW35_14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14305 CP118132.1 Protein Homology CDS 2928492 2929700 . - 0 ID=cds-WJG91837.1;Parent=gene-PUW35_14305;Dbxref=NCBI_GP:WJG91837.1;Name=WJG91837.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222390.1;locus_tag=PUW35_14305;product=MFS transporter;protein_id=WJG91837.1;transl_table=11 CP118132.1 Genbank gene 2929788 2930720 . + . ID=gene-PUW35_14310;Name=PUW35_14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14310 CP118132.1 Protein Homology CDS 2929788 2930720 . + 0 ID=cds-WJG91838.1;Parent=gene-PUW35_14310;Dbxref=NCBI_GP:WJG91838.1;Name=WJG91838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=PUW35_14310;product=LysR substrate-binding domain-containing protein;protein_id=WJG91838.1;transl_table=11 CP118132.1 Genbank gene 2930762 2932258 . - . ID=gene-PUW35_14315;Name=PUW35_14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14315 CP118132.1 Protein Homology CDS 2930762 2932258 . - 0 ID=cds-WJG91839.1;Parent=gene-PUW35_14315;Dbxref=NCBI_GP:WJG91839.1;Name=WJG91839.1;Ontology_term=GO:0015718,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=solute:proton symporter activity|0015295||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=PUW35_14315;product=gluconate:H+ symporter;protein_id=WJG91839.1;transl_table=11 CP118132.1 Genbank gene 2932255 2933205 . - . ID=gene-PUW35_14320;Name=PUW35_14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14320 CP118132.1 Protein Homology CDS 2932255 2933205 . - 0 ID=cds-WJG91840.1;Parent=gene-PUW35_14320;Dbxref=NCBI_GP:WJG91840.1;Name=WJG91840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=PUW35_14320;product=SDR family oxidoreductase;protein_id=WJG91840.1;transl_table=11 CP118132.1 Genbank gene 2933245 2934021 . - . ID=gene-PUW35_14325;Name=PUW35_14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14325 CP118132.1 Protein Homology CDS 2933245 2934021 . - 0 ID=cds-WJG91841.1;Parent=gene-PUW35_14325;Dbxref=NCBI_GP:WJG91841.1;Name=WJG91841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=PUW35_14325;product=HPr family phosphocarrier protein;protein_id=WJG91841.1;transl_table=11 CP118132.1 Genbank gene 2934026 2934664 . - . ID=gene-PUW35_14330;Name=PUW35_14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14330 CP118132.1 Protein Homology CDS 2934026 2934664 . - 0 ID=cds-WJG91842.1;Parent=gene-PUW35_14330;Dbxref=NCBI_GP:WJG91842.1;Name=WJG91842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=PUW35_14330;product=aldolase;protein_id=WJG91842.1;transl_table=11 CP118132.1 Genbank gene 2934661 2935923 . - . ID=gene-PUW35_14335;Name=PUW35_14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14335 CP118132.1 Protein Homology CDS 2934661 2935923 . - 0 ID=cds-WJG91843.1;Parent=gene-PUW35_14335;Dbxref=NCBI_GP:WJG91843.1;Name=WJG91843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=PUW35_14335;product=3-oxo-tetronate kinase;protein_id=WJG91843.1;transl_table=11 CP118132.1 Genbank gene 2935917 2936840 . - . ID=gene-PUW35_14340;Name=PUW35_14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14340 CP118132.1 Protein Homology CDS 2935917 2936840 . - 0 ID=cds-WJG91844.1;Parent=gene-PUW35_14340;Dbxref=NCBI_GP:WJG91844.1;Name=WJG91844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=PUW35_14340;product=NAD(P)-dependent oxidoreductase;protein_id=WJG91844.1;transl_table=11 CP118132.1 Genbank gene 2937037 2937801 . + . ID=gene-PUW35_14345;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=PUW35_14345 CP118132.1 Protein Homology CDS 2937037 2937801 . + 0 ID=cds-WJG91845.1;Parent=gene-PUW35_14345;Dbxref=NCBI_GP:WJG91845.1;Name=WJG91845.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=PUW35_14345;product=DNA-binding transcriptional repressor YgbI;protein_id=WJG91845.1;transl_table=11 CP118132.1 Genbank gene 2937820 2938224 . - . ID=gene-PUW35_14350;Name=PUW35_14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14350 CP118132.1 Protein Homology CDS 2937820 2938224 . - 0 ID=cds-WJG91846.1;Parent=gene-PUW35_14350;Dbxref=NCBI_GP:WJG91846.1;Name=WJG91846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=PUW35_14350;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WJG91846.1;transl_table=11 CP118132.1 Genbank pseudogene 2938395 2938987 . + . ID=gene-PUW35_14355;Name=PUW35_14355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_14355;pseudo=true CP118132.1 Protein Homology CDS 2938395 2938987 . + 0 ID=cds-PUW35_14355;Parent=gene-PUW35_14355;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=PUW35_14355;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2938987 2940414 . + . ID=gene-PUW35_14360;Name=PUW35_14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14360 CP118132.1 Protein Homology CDS 2938987 2940414 . + 0 ID=cds-WJG91847.1;Parent=gene-PUW35_14360;Dbxref=NCBI_GP:WJG91847.1;Name=WJG91847.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=PUW35_14360;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WJG91847.1;transl_table=11 CP118132.1 Genbank gene 2940425 2940661 . + . ID=gene-PUW35_14365;Name=PUW35_14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14365 CP118132.1 Protein Homology CDS 2940425 2940661 . + 0 ID=cds-WJG91848.1;Parent=gene-PUW35_14365;Dbxref=NCBI_GP:WJG91848.1;Name=WJG91848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=PUW35_14365;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WJG91848.1;transl_table=11 CP118132.1 Genbank gene 2940706 2941698 . - . ID=gene-PUW35_14370;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=PUW35_14370 CP118132.1 Protein Homology CDS 2940706 2941698 . - 0 ID=cds-WJG91849.1;Parent=gene-PUW35_14370;Dbxref=NCBI_GP:WJG91849.1;Name=WJG91849.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=PUW35_14370;product=RNA polymerase sigma factor RpoS;protein_id=WJG91849.1;transl_table=11 CP118132.1 Genbank gene 2941761 2942843 . - . ID=gene-PUW35_14375;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=PUW35_14375 CP118132.1 Protein Homology CDS 2941761 2942843 . - 0 ID=cds-WJG95112.1;Parent=gene-PUW35_14375;Dbxref=NCBI_GP:WJG95112.1;Name=WJG95112.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=PUW35_14375;product=murein hydrolase activator NlpD;protein_id=WJG95112.1;transl_table=11 CP118132.1 Genbank gene 2942773 2942931 . + . ID=gene-PUW35_14380;Name=PUW35_14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14380 CP118132.1 Protein Homology CDS 2942773 2942931 . + 0 ID=cds-WJG95113.1;Parent=gene-PUW35_14380;Dbxref=NCBI_GP:WJG95113.1;Name=WJG95113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=PUW35_14380;product=peptidase;protein_id=WJG95113.1;transl_table=11 CP118132.1 Genbank gene 2943070 2943696 . - . ID=gene-PUW35_14385;Name=PUW35_14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14385 CP118132.1 Protein Homology CDS 2943070 2943696 . - 0 ID=cds-WJG91850.1;Parent=gene-PUW35_14385;Dbxref=NCBI_GP:WJG91850.1;Name=WJG91850.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=PUW35_14385;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WJG91850.1;transl_table=11 CP118132.1 Genbank gene 2943690 2944451 . - . ID=gene-PUW35_14390;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=PUW35_14390 CP118132.1 Protein Homology CDS 2943690 2944451 . - 0 ID=cds-WJG91851.1;Parent=gene-PUW35_14390;Dbxref=NCBI_GP:WJG91851.1;Name=WJG91851.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=PUW35_14390;product=5'/3'-nucleotidase SurE;protein_id=WJG91851.1;transl_table=11 CP118132.1 Genbank pseudogene 2944432 2945480 . - . ID=gene-PUW35_14395;Name=truD;gbkey=Gene;gene=truD;gene_biotype=pseudogene;locus_tag=PUW35_14395;pseudo=true CP118132.1 Protein Homology CDS 2944432 2945480 . - 0 ID=cds-PUW35_14395;Parent=gene-PUW35_14395;Note=frameshifted;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=PUW35_14395;product=tRNA pseudouridine(13) synthase TruD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2945477 2945956 . - . ID=gene-PUW35_14400;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=PUW35_14400 CP118132.1 Protein Homology CDS 2945477 2945956 . - 0 ID=cds-WJG91852.1;Parent=gene-PUW35_14400;Dbxref=NCBI_GP:WJG91852.1;Name=WJG91852.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=PUW35_14400;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WJG91852.1;transl_table=11 CP118132.1 Genbank gene 2945956 2946666 . - . ID=gene-PUW35_14405;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=PUW35_14405 CP118132.1 Protein Homology CDS 2945956 2946666 . - 0 ID=cds-WJG91853.1;Parent=gene-PUW35_14405;Dbxref=NCBI_GP:WJG91853.1;Name=WJG91853.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=PUW35_14405;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WJG91853.1;transl_table=11 CP118132.1 Genbank gene 2946685 2946996 . - . ID=gene-PUW35_14410;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=PUW35_14410 CP118132.1 Protein Homology CDS 2946685 2946996 . - 0 ID=cds-WJG91854.1;Parent=gene-PUW35_14410;Dbxref=NCBI_GP:WJG91854.1;Name=WJG91854.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=PUW35_14410;product=cell division protein FtsB;protein_id=WJG91854.1;transl_table=11 CP118132.1 Genbank gene 2947187 2947510 . - . ID=gene-PUW35_14415;Name=PUW35_14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14415 CP118132.1 Protein Homology CDS 2947187 2947510 . - 0 ID=cds-WJG91855.1;Parent=gene-PUW35_14415;Dbxref=NCBI_GP:WJG91855.1;Name=WJG91855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=PUW35_14415;product=DUF3561 family protein;protein_id=WJG91855.1;transl_table=11 CP118132.1 Genbank gene 2947561 2948166 . - . ID=gene-PUW35_14420;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=PUW35_14420 CP118132.1 Protein Homology CDS 2947561 2948166 . - 0 ID=cds-WJG91856.1;Parent=gene-PUW35_14420;Dbxref=NCBI_GP:WJG91856.1;Name=WJG91856.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=PUW35_14420;product=adenylyl-sulfate kinase;protein_id=WJG91856.1;transl_table=11 CP118132.1 Genbank gene 2948153 2949592 . - . ID=gene-PUW35_14425;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=PUW35_14425 CP118132.1 Protein Homology CDS 2948153 2949592 . - 0 ID=cds-WJG91857.1;Parent=gene-PUW35_14425;Dbxref=NCBI_GP:WJG91857.1;Name=WJG91857.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=PUW35_14425;product=sulfate adenylyltransferase subunit CysN;protein_id=WJG91857.1;transl_table=11 CP118132.1 Genbank gene 2949602 2950510 . - . ID=gene-PUW35_14430;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=PUW35_14430 CP118132.1 Protein Homology CDS 2949602 2950510 . - 0 ID=cds-WJG91858.1;Parent=gene-PUW35_14430;Dbxref=NCBI_GP:WJG91858.1;Name=WJG91858.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=PUW35_14430;product=sulfate adenylyltransferase subunit CysD;protein_id=WJG91858.1;transl_table=11 CP118132.1 Genbank gene 2950761 2951807 . + . ID=gene-PUW35_14435;Name=PUW35_14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14435 CP118132.1 Protein Homology CDS 2950761 2951807 . + 0 ID=cds-WJG91859.1;Parent=gene-PUW35_14435;Dbxref=NCBI_GP:WJG91859.1;Name=WJG91859.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=PUW35_14435;product=aminopeptidase;protein_id=WJG91859.1;transl_table=11 CP118132.1 Genbank gene 2952070 2952363 . - . ID=gene-PUW35_14440;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=PUW35_14440 CP118132.1 Protein Homology CDS 2952070 2952363 . - 0 ID=cds-WJG91860.1;Parent=gene-PUW35_14440;Dbxref=NCBI_GP:WJG91860.1;Name=WJG91860.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=PUW35_14440;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WJG91860.1;transl_table=11 CP118132.1 Genbank gene 2952363 2953283 . - . ID=gene-PUW35_14445;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=PUW35_14445 CP118132.1 Protein Homology CDS 2952363 2953283 . - 0 ID=cds-WJG91861.1;Parent=gene-PUW35_14445;Dbxref=NCBI_GP:WJG91861.1;Name=WJG91861.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=PUW35_14445;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WJG91861.1;transl_table=11 CP118132.1 Genbank gene 2953280 2953930 . - . ID=gene-PUW35_14450;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=PUW35_14450 CP118132.1 Protein Homology CDS 2953280 2953930 . - 0 ID=cds-WJG91862.1;Parent=gene-PUW35_14450;Dbxref=NCBI_GP:WJG91862.1;Name=WJG91862.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas6e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=PUW35_14450;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WJG91862.1;transl_table=11 CP118132.1 Genbank gene 2953912 2954658 . - . ID=gene-PUW35_14455;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=PUW35_14455 CP118132.1 Protein Homology CDS 2953912 2954658 . - 0 ID=cds-WJG91863.1;Parent=gene-PUW35_14455;Dbxref=NCBI_GP:WJG91863.1;Name=WJG91863.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas5e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=PUW35_14455;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WJG91863.1;transl_table=11 CP118132.1 Genbank gene 2954669 2955727 . - . ID=gene-PUW35_14460;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=PUW35_14460 CP118132.1 Protein Homology CDS 2954669 2955727 . - 0 ID=cds-WJG91864.1;Parent=gene-PUW35_14460;Dbxref=NCBI_GP:WJG91864.1;Name=WJG91864.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=PUW35_14460;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WJG91864.1;transl_table=11 CP118132.1 Genbank gene 2955741 2956295 . - . ID=gene-PUW35_14465;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=PUW35_14465 CP118132.1 Protein Homology CDS 2955741 2956295 . - 0 ID=cds-WJG91865.1;Parent=gene-PUW35_14465;Dbxref=NCBI_GP:WJG91865.1;Name=WJG91865.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casB;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=PUW35_14465;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WJG91865.1;transl_table=11 CP118132.1 Genbank gene 2956292 2957848 . - . ID=gene-PUW35_14470;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=PUW35_14470 CP118132.1 Protein Homology CDS 2956292 2957848 . - 0 ID=cds-WJG91866.1;Parent=gene-PUW35_14470;Dbxref=NCBI_GP:WJG91866.1;Name=WJG91866.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=PUW35_14470;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WJG91866.1;transl_table=11 CP118132.1 Genbank pseudogene 2957860 2960523 . - . ID=gene-PUW35_14475;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=pseudogene;locus_tag=PUW35_14475;pseudo=true CP118132.1 Protein Homology CDS 2957860 2960523 . - 0 ID=cds-PUW35_14475;Parent=gene-PUW35_14475;Note=internal stop;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=PUW35_14475;product=CRISPR-associated helicase Cas3';pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2960968 2961920 . + . ID=gene-PUW35_14480;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=pseudogene;locus_tag=PUW35_14480;pseudo=true CP118132.1 Protein Homology CDS 2960968 2961920 . + 0 ID=cds-PUW35_14480;Parent=gene-PUW35_14480;Note=frameshifted;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=PUW35_14480;product=SPI-1 type III secretion system effector SopD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2962008 2962742 . - . ID=gene-PUW35_14485;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=PUW35_14485 CP118132.1 Protein Homology CDS 2962008 2962742 . - 0 ID=cds-WJG91867.1;Parent=gene-PUW35_14485;Dbxref=NCBI_GP:WJG91867.1;Name=WJG91867.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=PUW35_14485;product=phosphoadenosine phosphosulfate reductase;protein_id=WJG91867.1;transl_table=11 CP118132.1 Genbank pseudogene 2962844 2964555 . - . ID=gene-PUW35_14490;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=pseudogene;locus_tag=PUW35_14490;pseudo=true CP118132.1 Protein Homology CDS 2962844 2964555 . - 0 ID=cds-PUW35_14490;Parent=gene-PUW35_14490;Note=frameshifted;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=PUW35_14490;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2964555 2966353 . - . ID=gene-PUW35_14495;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=pseudogene;locus_tag=PUW35_14495;pseudo=true CP118132.1 Protein Homology CDS 2964555 2966353 . - 0 ID=cds-PUW35_14495;Parent=gene-PUW35_14495;Note=frameshifted;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=PUW35_14495;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2966777 2967139 . + . ID=gene-PUW35_14500;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=PUW35_14500 CP118132.1 Protein Homology CDS 2966777 2967139 . + 0 ID=cds-WJG91868.1;Parent=gene-PUW35_14500;Dbxref=NCBI_GP:WJG91868.1;Name=WJG91868.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=PUW35_14500;product=6-carboxytetrahydropterin synthase QueD;protein_id=WJG91868.1;transl_table=11 CP118132.1 Genbank gene 2967227 2968024 . - . ID=gene-PUW35_14505;Name=PUW35_14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14505 CP118132.1 Protein Homology CDS 2967227 2968024 . - 0 ID=cds-WJG91869.1;Parent=gene-PUW35_14505;Dbxref=NCBI_GP:WJG91869.1;Name=WJG91869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=PUW35_14505;product=MBL fold metallo-hydrolase;protein_id=WJG91869.1;transl_table=11 CP118132.1 Genbank direct_repeat 2968124 2968758 . + . ID=id-CP118132.1:2968124..2968758;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=2968185..2968211;rpt_unit_seq=gtttatccccgctggcgcggggaacac CP118132.1 Genbank gene 2969055 2969726 . - . ID=gene-PUW35_14510;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=PUW35_14510 CP118132.1 Protein Homology CDS 2969055 2969726 . - 0 ID=cds-WJG91870.1;Parent=gene-PUW35_14510;Dbxref=NCBI_GP:WJG91870.1;Name=WJG91870.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=PUW35_14510;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WJG91870.1;transl_table=11 CP118132.1 Genbank gene 2969862 2971160 . - . ID=gene-PUW35_14515;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=PUW35_14515 CP118132.1 Protein Homology CDS 2969862 2971160 . - 0 ID=cds-WJG91871.1;Parent=gene-PUW35_14515;Dbxref=NCBI_GP:WJG91871.1;Name=WJG91871.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=PUW35_14515;product=phosphopyruvate hydratase;protein_id=WJG91871.1;transl_table=11 CP118132.1 Genbank gene 2971243 2972880 . - . ID=gene-PUW35_14520;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=PUW35_14520 CP118132.1 Protein Homology CDS 2971243 2972880 . - 0 ID=cds-WJG91872.1;Parent=gene-PUW35_14520;Dbxref=NCBI_GP:WJG91872.1;Name=WJG91872.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=PUW35_14520;product=CTP synthase (glutamine hydrolyzing);protein_id=WJG91872.1;transl_table=11 CP118132.1 Genbank gene 2973108 2973908 . - . ID=gene-PUW35_14525;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=PUW35_14525 CP118132.1 Protein Homology CDS 2973108 2973908 . - 0 ID=cds-WJG91873.1;Parent=gene-PUW35_14525;Dbxref=NCBI_GP:WJG91873.1;Name=WJG91873.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=PUW35_14525;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WJG91873.1;transl_table=11 CP118132.1 Genbank gene 2974517 2975104 . + . ID=gene-PUW35_14530;Name=PUW35_14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14530 CP118132.1 Protein Homology CDS 2974517 2975104 . + 0 ID=cds-WJG91874.1;Parent=gene-PUW35_14530;Dbxref=NCBI_GP:WJG91874.1;Name=WJG91874.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=PUW35_14530;product=fimbrial protein;protein_id=WJG91874.1;transl_table=11 CP118132.1 Genbank gene 2975238 2977589 . + . ID=gene-PUW35_14535;Name=PUW35_14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14535 CP118132.1 Protein Homology CDS 2975238 2977589 . + 0 ID=cds-WJG91875.1;Parent=gene-PUW35_14535;Dbxref=NCBI_GP:WJG91875.1;Name=WJG91875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011804.0;locus_tag=PUW35_14535;product=fimbrial biogenesis outer membrane usher protein;protein_id=WJG91875.1;transl_table=11 CP118132.1 Genbank gene 2977553 2977882 . + . ID=gene-PUW35_14540;Name=PUW35_14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14540 CP118132.1 GeneMarkS-2+ CDS 2977553 2977882 . + 0 ID=cds-WJG91876.1;Parent=gene-PUW35_14540;Dbxref=NCBI_GP:WJG91876.1;Name=WJG91876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_14540;product=hypothetical protein;protein_id=WJG91876.1;transl_table=11 CP118132.1 Genbank gene 2977895 2978668 . + . ID=gene-PUW35_14545;Name=PUW35_14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14545 CP118132.1 Protein Homology CDS 2977895 2978668 . + 0 ID=cds-WJG91877.1;Parent=gene-PUW35_14545;Dbxref=NCBI_GP:WJG91877.1;Name=WJG91877.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=PUW35_14545;product=fimbria/pilus periplasmic chaperone;protein_id=WJG91877.1;transl_table=11 CP118132.1 Genbank gene 2978688 2979191 . + . ID=gene-PUW35_14550;Name=PUW35_14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14550 CP118132.1 Protein Homology CDS 2978688 2979191 . + 0 ID=cds-WJG91878.1;Parent=gene-PUW35_14550;Dbxref=NCBI_GP:WJG91878.1;Name=WJG91878.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=PUW35_14550;product=fimbrial protein;protein_id=WJG91878.1;transl_table=11 CP118132.1 Genbank gene 2979206 2979676 . + . ID=gene-PUW35_14555;Name=PUW35_14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14555 CP118132.1 Protein Homology CDS 2979206 2979676 . + 0 ID=cds-WJG91879.1;Parent=gene-PUW35_14555;Dbxref=NCBI_GP:WJG91879.1;Name=WJG91879.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=PUW35_14555;product=fimbrial protein;protein_id=WJG91879.1;transl_table=11 CP118132.1 Genbank gene 2979673 2980209 . + . ID=gene-PUW35_14560;Name=PUW35_14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14560 CP118132.1 Protein Homology CDS 2979673 2980209 . + 0 ID=cds-WJG91880.1;Parent=gene-PUW35_14560;Dbxref=NCBI_GP:WJG91880.1;Name=WJG91880.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=PUW35_14560;product=fimbrial protein;protein_id=WJG91880.1;transl_table=11 CP118132.1 Genbank gene 2980264 2981295 . + . ID=gene-PUW35_14565;Name=PUW35_14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14565 CP118132.1 Protein Homology CDS 2980264 2981295 . + 0 ID=cds-WJG91881.1;Parent=gene-PUW35_14565;Dbxref=NCBI_GP:WJG91881.1;Name=WJG91881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750138.1;locus_tag=PUW35_14565;product=hypothetical protein;protein_id=WJG91881.1;transl_table=11 CP118132.1 Genbank gene 2981645 2983879 . - . ID=gene-PUW35_14570;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=PUW35_14570 CP118132.1 Protein Homology CDS 2981645 2983879 . - 0 ID=cds-WJG91882.1;Parent=gene-PUW35_14570;Dbxref=NCBI_GP:WJG91882.1;Name=WJG91882.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=PUW35_14570;product=GTP diphosphokinase;protein_id=WJG91882.1;transl_table=11 CP118132.1 Genbank gene 2983931 2985226 . - . ID=gene-PUW35_14575;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=PUW35_14575 CP118132.1 Protein Homology CDS 2983931 2985226 . - 0 ID=cds-WJG91883.1;Parent=gene-PUW35_14575;Dbxref=NCBI_GP:WJG91883.1;Name=WJG91883.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=PUW35_14575;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WJG91883.1;transl_table=11 CP118132.1 Genbank gene 2985284 2988040 . + . ID=gene-PUW35_14580;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=PUW35_14580 CP118132.1 Protein Homology CDS 2985284 2988040 . + 0 ID=cds-WJG91884.1;Parent=gene-PUW35_14580;Dbxref=NCBI_GP:WJG91884.1;Name=WJG91884.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=PUW35_14580;product=two-component sensor histidine kinase BarA;protein_id=WJG91884.1;transl_table=11 CP118132.1 Genbank pseudogene 2988084 2989226 . - . ID=gene-PUW35_14585;Name=PUW35_14585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_14585;pseudo=true CP118132.1 Protein Homology CDS 2988084 2989226 . - 0 ID=cds-PUW35_14585;Parent=gene-PUW35_14585;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=PUW35_14585;product=glycerate kinase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2989304 2990644 . - . ID=gene-PUW35_14590;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=pseudogene;locus_tag=PUW35_14590;pseudo=true CP118132.1 Protein Homology CDS 2989304 2990644 . - 0 ID=cds-PUW35_14590;Parent=gene-PUW35_14590;Note=internal stop;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=PUW35_14590;product=glucarate dehydratase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 2990665 2992006 . - . ID=gene-PUW35_14595;Name=PUW35_14595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_14595;pseudo=true CP118132.1 Protein Homology CDS 2990665 2992006 . - 0 ID=cds-PUW35_14595;Parent=gene-PUW35_14595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=PUW35_14595;product=enolase C-terminal domain-like protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 2992003 2993361 . - . ID=gene-PUW35_14600;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=PUW35_14600 CP118132.1 Protein Homology CDS 2992003 2993361 . - 0 ID=cds-WJG91885.1;Parent=gene-PUW35_14600;Dbxref=NCBI_GP:WJG91885.1;Name=WJG91885.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=PUW35_14600;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WJG91885.1;transl_table=11 CP118132.1 Genbank gene 2993444 2993692 . + . ID=gene-PUW35_14605;Name=PUW35_14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14605 CP118132.1 GeneMarkS-2+ CDS 2993444 2993692 . + 0 ID=cds-WJG91886.1;Parent=gene-PUW35_14605;Dbxref=NCBI_GP:WJG91886.1;Name=WJG91886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_14605;product=hypothetical protein;protein_id=WJG91886.1;transl_table=11 CP118132.1 Genbank gene 2993842 2994291 . - . ID=gene-PUW35_14610;Name=PUW35_14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14610 CP118132.1 Protein Homology CDS 2993842 2994291 . - 0 ID=cds-WJG91887.1;Parent=gene-PUW35_14610;Dbxref=NCBI_GP:WJG91887.1;Name=WJG91887.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=PUW35_14610;product=flavodoxin;protein_id=WJG91887.1;transl_table=11 CP118132.1 Genbank gene 2994310 2995092 . - . ID=gene-PUW35_14615;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=PUW35_14615 CP118132.1 Protein Homology CDS 2994310 2995092 . - 0 ID=cds-WJG91888.1;Parent=gene-PUW35_14615;Dbxref=NCBI_GP:WJG91888.1;Name=WJG91888.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=PUW35_14615;product=tRNA pseudouridine(65) synthase TruC;protein_id=WJG91888.1;transl_table=11 CP118132.1 Genbank gene 2995092 2995421 . - . ID=gene-PUW35_14620;Name=PUW35_14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14620 CP118132.1 Protein Homology CDS 2995092 2995421 . - 0 ID=cds-WJG91889.1;Parent=gene-PUW35_14620;Dbxref=NCBI_GP:WJG91889.1;Name=WJG91889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=PUW35_14620;product=YqcC family protein;protein_id=WJG91889.1;transl_table=11 CP118132.1 Genbank gene 2996033 2996578 . - . ID=gene-PUW35_14625;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=PUW35_14625 CP118132.1 Protein Homology CDS 2996033 2996578 . - 0 ID=cds-WJG91890.1;Parent=gene-PUW35_14625;Dbxref=NCBI_GP:WJG91890.1;Name=WJG91890.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=PUW35_14625;product=SecY-interacting protein;protein_id=WJG91890.1;transl_table=11 CP118132.1 Genbank gene 2996647 2997495 . + . ID=gene-PUW35_14630;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=PUW35_14630 CP118132.1 Protein Homology CDS 2996647 2997495 . + 0 ID=cds-WJG91891.1;Parent=gene-PUW35_14630;Dbxref=NCBI_GP:WJG91891.1;Name=WJG91891.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=PUW35_14630;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WJG91891.1;transl_table=11 CP118132.1 Genbank gene 2997608 2998972 . + . ID=gene-PUW35_14635;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=PUW35_14635 CP118132.1 Protein Homology CDS 2997608 2998972 . + 0 ID=cds-WJG91892.1;Parent=gene-PUW35_14635;Dbxref=NCBI_GP:WJG91892.1;Name=WJG91892.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=PUW35_14635;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WJG91892.1;transl_table=11 CP118132.1 Genbank gene 2999536 3000825 . + . ID=gene-PUW35_14640;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=PUW35_14640 CP118132.1 Protein Homology CDS 2999536 3000825 . + 0 ID=cds-WJG91893.1;Parent=gene-PUW35_14640;Dbxref=NCBI_GP:WJG91893.1;Name=WJG91893.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=PUW35_14640;product=HAAAP family serine/threonine permease SdaC;protein_id=WJG91893.1;transl_table=11 CP118132.1 Genbank gene 3000884 3002251 . + . ID=gene-PUW35_14645;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=PUW35_14645 CP118132.1 Protein Homology CDS 3000884 3002251 . + 0 ID=cds-WJG91894.1;Parent=gene-PUW35_14645;Dbxref=NCBI_GP:WJG91894.1;Name=WJG91894.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=PUW35_14645;product=L-serine ammonia-lyase II;protein_id=WJG91894.1;transl_table=11 CP118132.1 Genbank gene 3002421 3003176 . + . ID=gene-PUW35_14650;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=PUW35_14650 CP118132.1 Protein Homology CDS 3002421 3003176 . + 0 ID=cds-WJG91895.1;Parent=gene-PUW35_14650;Dbxref=NCBI_GP:WJG91895.1;Name=WJG91895.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=PUW35_14650;product=flap endonuclease Xni;protein_id=WJG91895.1;transl_table=11 CP118132.1 Genbank pseudogene 3003268 3004415 . - . ID=gene-PUW35_14655;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=pseudogene;locus_tag=PUW35_14655;pseudo=true CP118132.1 Protein Homology CDS 3003268 3004415 . - 0 ID=cds-PUW35_14655;Parent=gene-PUW35_14655;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=PUW35_14655;product=lactaldehyde reductase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3004432 3005078 . - . ID=gene-PUW35_14660;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=pseudogene;locus_tag=PUW35_14660;pseudo=true CP118132.1 Protein Homology CDS 3004432 3005078 . - 0 ID=cds-PUW35_14660;Parent=gene-PUW35_14660;Note=frameshifted;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=PUW35_14660;product=L-fuculose-phosphate aldolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3005633 3006949 . + . ID=gene-PUW35_14665;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PUW35_14665 CP118132.1 Protein Homology CDS 3005633 3006949 . + 0 ID=cds-WJG91896.1;Parent=gene-PUW35_14665;Dbxref=NCBI_GP:WJG91896.1;Name=WJG91896.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=PUW35_14665;product=L-fucose:H+ symporter permease;protein_id=WJG91896.1;transl_table=11 CP118132.1 Genbank gene 3006981 3008756 . + . ID=gene-PUW35_14670;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=PUW35_14670 CP118132.1 Protein Homology CDS 3006981 3008756 . + 0 ID=cds-WJG91897.1;Parent=gene-PUW35_14670;Dbxref=NCBI_GP:WJG91897.1;Name=WJG91897.1;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=PUW35_14670;product=L-fucose isomerase;protein_id=WJG91897.1;transl_table=11 CP118132.1 Genbank gene 3008857 3010275 . + . ID=gene-PUW35_14675;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=PUW35_14675 CP118132.1 Protein Homology CDS 3008857 3010275 . + 0 ID=cds-WJG91898.1;Parent=gene-PUW35_14675;Dbxref=NCBI_GP:WJG91898.1;Name=WJG91898.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=PUW35_14675;product=L-fuculokinase;protein_id=WJG91898.1;transl_table=11 CP118132.1 Genbank gene 3010277 3010699 . + . ID=gene-PUW35_14680;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=PUW35_14680 CP118132.1 Protein Homology CDS 3010277 3010699 . + 0 ID=cds-WJG91899.1;Parent=gene-PUW35_14680;Dbxref=NCBI_GP:WJG91899.1;Name=WJG91899.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=PUW35_14680;product=L-fucose mutarotase;protein_id=WJG91899.1;transl_table=11 CP118132.1 Genbank gene 3010757 3011467 . + . ID=gene-PUW35_14685;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=PUW35_14685 CP118132.1 Protein Homology CDS 3010757 3011467 . + 0 ID=cds-WJG91900.1;Parent=gene-PUW35_14685;Dbxref=NCBI_GP:WJG91900.1;Name=WJG91900.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=PUW35_14685;product=L-fucose operon activator;protein_id=WJG91900.1;transl_table=11 CP118132.1 Genbank gene 3011526 3012626 . - . ID=gene-PUW35_14690;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=PUW35_14690 CP118132.1 Protein Homology CDS 3011526 3012626 . - 0 ID=cds-WJG91901.1;Parent=gene-PUW35_14690;Dbxref=NCBI_GP:WJG91901.1;Name=WJG91901.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=PUW35_14690;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WJG91901.1;transl_table=11 CP118132.1 Genbank gene 3012619 3013014 . - . ID=gene-PUW35_14695;Name=PUW35_14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14695 CP118132.1 Protein Homology CDS 3012619 3013014 . - 0 ID=cds-WJG91902.1;Parent=gene-PUW35_14695;Dbxref=NCBI_GP:WJG91902.1;Name=WJG91902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=PUW35_14695;product=DUF423 domain-containing protein;protein_id=WJG91902.1;transl_table=11 CP118132.1 Genbank gene 3013033 3013950 . - . ID=gene-PUW35_14700;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=PUW35_14700 CP118132.1 Protein Homology CDS 3013033 3013950 . - 0 ID=cds-WJG91903.1;Parent=gene-PUW35_14700;Dbxref=NCBI_GP:WJG91903.1;Name=WJG91903.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=PUW35_14700;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WJG91903.1;transl_table=11 CP118132.1 Genbank gene 3014297 3014524 . - . ID=gene-PUW35_14705;Name=PUW35_14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14705 CP118132.1 Protein Homology CDS 3014297 3014524 . - 0 ID=cds-WJG91904.1;Parent=gene-PUW35_14705;Dbxref=NCBI_GP:WJG91904.1;Name=WJG91904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=PUW35_14705;product=YgdI/YgdR family lipoprotein;protein_id=WJG91904.1;transl_table=11 CP118132.1 Genbank gene 3014717 3015922 . + . ID=gene-PUW35_14710;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=PUW35_14710 CP118132.1 Protein Homology CDS 3014717 3015922 . + 0 ID=cds-WJG91905.1;Parent=gene-PUW35_14710;Dbxref=NCBI_GP:WJG91905.1;Name=WJG91905.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=PUW35_14710;product=cysteine desulfurase CsdA;protein_id=WJG91905.1;transl_table=11 CP118132.1 Genbank gene 3015922 3016365 . + . ID=gene-PUW35_14715;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=PUW35_14715 CP118132.1 Protein Homology CDS 3015922 3016365 . + 0 ID=cds-WJG91906.1;Parent=gene-PUW35_14715;Dbxref=NCBI_GP:WJG91906.1;Name=WJG91906.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=PUW35_14715;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WJG91906.1;transl_table=11 CP118132.1 Genbank gene 3016665 3017552 . + . ID=gene-PUW35_14720;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PUW35_14720 CP118132.1 Protein Homology CDS 3016665 3017552 . + 0 ID=cds-WJG95114.1;Parent=gene-PUW35_14720;Dbxref=NCBI_GP:WJG95114.1;Name=WJG95114.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=PUW35_14720;product=EamA family transporter RarD;protein_id=WJG95114.1;transl_table=11 CP118132.1 Genbank gene 3017604 3018410 . - . ID=gene-PUW35_14725;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=PUW35_14725 CP118132.1 Protein Homology CDS 3017604 3018410 . - 0 ID=cds-WJG91907.1;Parent=gene-PUW35_14725;Dbxref=NCBI_GP:WJG91907.1;Name=WJG91907.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=PUW35_14725;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WJG91907.1;transl_table=11 CP118132.1 Genbank gene 3018520 3019617 . - . ID=gene-PUW35_14730;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=PUW35_14730 CP118132.1 Protein Homology CDS 3018520 3019617 . - 0 ID=cds-WJG91908.1;Parent=gene-PUW35_14730;Dbxref=NCBI_GP:WJG91908.1;Name=WJG91908.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=PUW35_14730;product=murein transglycosylase A;protein_id=WJG91908.1;transl_table=11 CP118132.1 Genbank gene 3019825 3019901 . + . ID=gene-PUW35_14735;Name=PUW35_14735;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_14735 CP118132.1 tRNAscan-SE tRNA 3019825 3019901 . + . ID=rna-PUW35_14735;Parent=gene-PUW35_14735;anticodon=(pos:3019859..3019861);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_14735;product=tRNA-Met CP118132.1 tRNAscan-SE exon 3019825 3019901 . + . ID=exon-PUW35_14735-1;Parent=rna-PUW35_14735;anticodon=(pos:3019859..3019861);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_14735;product=tRNA-Met CP118132.1 Genbank gene 3019931 3020007 . + . ID=gene-PUW35_14740;Name=PUW35_14740;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_14740 CP118132.1 tRNAscan-SE tRNA 3019931 3020007 . + . ID=rna-PUW35_14740;Parent=gene-PUW35_14740;anticodon=(pos:3019965..3019967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_14740;product=tRNA-Met CP118132.1 tRNAscan-SE exon 3019931 3020007 . + . ID=exon-PUW35_14740-1;Parent=rna-PUW35_14740;anticodon=(pos:3019965..3019967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_14740;product=tRNA-Met CP118132.1 Genbank gene 3020117 3021370 . - . ID=gene-PUW35_14745;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=PUW35_14745 CP118132.1 Protein Homology CDS 3020117 3021370 . - 0 ID=cds-WJG91909.1;Parent=gene-PUW35_14745;Dbxref=NCBI_GP:WJG91909.1;Name=WJG91909.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=PUW35_14745;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WJG91909.1;transl_table=11 CP118132.1 Genbank gene 3021603 3022934 . + . ID=gene-PUW35_14750;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=PUW35_14750 CP118132.1 Protein Homology CDS 3021603 3022934 . + 0 ID=cds-WJG91910.1;Parent=gene-PUW35_14750;Dbxref=NCBI_GP:WJG91910.1;Name=WJG91910.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=PUW35_14750;product=amino-acid N-acetyltransferase;protein_id=WJG91910.1;transl_table=11 CP118132.1 Genbank gene 3023037 3024872 . - . ID=gene-PUW35_14755;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=PUW35_14755 CP118132.1 Protein Homology CDS 3023037 3024872 . - 0 ID=cds-WJG91911.1;Parent=gene-PUW35_14755;Dbxref=NCBI_GP:WJG91911.1;Name=WJG91911.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=PUW35_14755;product=exodeoxyribonuclease V subunit alpha;protein_id=WJG91911.1;transl_table=11 CP118132.1 Genbank gene 3024869 3028414 . - . ID=gene-PUW35_14760;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=PUW35_14760 CP118132.1 Protein Homology CDS 3024869 3028414 . - 0 ID=cds-WJG91912.1;Parent=gene-PUW35_14760;Dbxref=NCBI_GP:WJG91912.1;Name=WJG91912.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=PUW35_14760;product=exodeoxyribonuclease V subunit beta;protein_id=WJG91912.1;transl_table=11 CP118132.1 Genbank gene 3028407 3031295 . - . ID=gene-PUW35_14765;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=PUW35_14765 CP118132.1 Protein Homology CDS 3028407 3031295 . - 0 ID=cds-WJG91913.1;Parent=gene-PUW35_14765;Dbxref=NCBI_GP:WJG91913.1;Name=WJG91913.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=PUW35_14765;product=pitrilysin;protein_id=WJG91913.1;transl_table=11 CP118132.1 Genbank gene 3031473 3031982 . - . ID=gene-PUW35_14770;Name=PUW35_14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14770 CP118132.1 Protein Homology CDS 3031473 3031982 . - 0 ID=cds-WJG95115.1;Parent=gene-PUW35_14770;Dbxref=NCBI_GP:WJG95115.1;Name=WJG95115.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037683.2;locus_tag=PUW35_14770;product=hypothetical protein;protein_id=WJG95115.1;transl_table=11 CP118132.1 Genbank pseudogene 3031880 3034795 . - . ID=gene-PUW35_14775;Name=recC;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=PUW35_14775;pseudo=true CP118132.1 Protein Homology CDS 3031880 3034795 . - 0 ID=cds-PUW35_14775;Parent=gene-PUW35_14775;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: protein motif:HMM:NF008289.0;locus_tag=PUW35_14775;product=exodeoxyribonuclease V subunit gamma;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3034859 3035179 . - . ID=gene-PUW35_14780;Name=PUW35_14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14780 CP118132.1 Protein Homology CDS 3034859 3035179 . - 0 ID=cds-WJG91914.1;Parent=gene-PUW35_14780;Dbxref=NCBI_GP:WJG91914.1;Name=WJG91914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=PUW35_14780;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WJG91914.1;transl_table=11 CP118132.1 Genbank gene 3035164 3035571 . - . ID=gene-PUW35_14785;Name=PUW35_14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14785 CP118132.1 Protein Homology CDS 3035164 3035571 . - 0 ID=cds-WJG91915.1;Parent=gene-PUW35_14785;Dbxref=NCBI_GP:WJG91915.1;Name=WJG91915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=PUW35_14785;product=DUF2509 family protein;protein_id=WJG91915.1;transl_table=11 CP118132.1 Genbank gene 3035568 3036131 . - . ID=gene-PUW35_14790;Name=PUW35_14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14790 CP118132.1 Protein Homology CDS 3035568 3036131 . - 0 ID=cds-WJG91916.1;Parent=gene-PUW35_14790;Dbxref=NCBI_GP:WJG91916.1;Name=WJG91916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=PUW35_14790;product=prepilin peptidase-dependent protein;protein_id=WJG91916.1;transl_table=11 CP118132.1 Genbank gene 3036122 3036592 . - . ID=gene-PUW35_14795;Name=PUW35_14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14795 CP118132.1 Protein Homology CDS 3036122 3036592 . - 0 ID=cds-WJG91917.1;Parent=gene-PUW35_14795;Dbxref=NCBI_GP:WJG91917.1;Name=WJG91917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=PUW35_14795;product=prepilin peptidase-dependent protein;protein_id=WJG91917.1;transl_table=11 CP118132.1 Genbank gene 3036776 3037570 . - . ID=gene-PUW35_14800;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=PUW35_14800 CP118132.1 Protein Homology CDS 3036776 3037570 . - 0 ID=cds-WJG91918.1;Parent=gene-PUW35_14800;Dbxref=NCBI_GP:WJG91918.1;Name=WJG91918.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=PUW35_14800;product=thymidylate synthase;protein_id=WJG91918.1;transl_table=11 CP118132.1 Genbank gene 3037577 3038452 . - . ID=gene-PUW35_14805;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=PUW35_14805 CP118132.1 Protein Homology CDS 3037577 3038452 . - 0 ID=cds-WJG91919.1;Parent=gene-PUW35_14805;Dbxref=NCBI_GP:WJG91919.1;Name=WJG91919.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=PUW35_14805;product=prolipoprotein diacylglyceryl transferase;protein_id=WJG91919.1;transl_table=11 CP118132.1 Genbank gene 3038668 3040914 . - . ID=gene-PUW35_14810;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PUW35_14810 CP118132.1 Protein Homology CDS 3038668 3040914 . - 0 ID=cds-WJG91920.1;Parent=gene-PUW35_14810;Dbxref=NCBI_GP:WJG91920.1;Name=WJG91920.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=PUW35_14810;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WJG91920.1;transl_table=11 CP118132.1 Genbank gene 3040927 3041457 . - . ID=gene-PUW35_14815;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=PUW35_14815 CP118132.1 Protein Homology CDS 3040927 3041457 . - 0 ID=cds-WJG91921.1;Parent=gene-PUW35_14815;Dbxref=NCBI_GP:WJG91921.1;Name=WJG91921.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=PUW35_14815;product=RNA pyrophosphohydrolase;protein_id=WJG91921.1;transl_table=11 CP118132.1 Genbank gene 3042140 3042835 . + . ID=gene-PUW35_14820;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=PUW35_14820 CP118132.1 Protein Homology CDS 3042140 3042835 . + 0 ID=cds-WJG91922.1;Parent=gene-PUW35_14820;Dbxref=NCBI_GP:WJG91922.1;Name=WJG91922.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=PUW35_14820;product=DNA mismatch repair endonuclease MutH;protein_id=WJG91922.1;transl_table=11 CP118132.1 Genbank gene 3043017 3043730 . + . ID=gene-PUW35_14825;Name=PUW35_14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14825 CP118132.1 Protein Homology CDS 3043017 3043730 . + 0 ID=cds-WJG91923.1;Parent=gene-PUW35_14825;Dbxref=NCBI_GP:WJG91923.1;Name=WJG91923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=PUW35_14825;product=TerC family protein;protein_id=WJG91923.1;transl_table=11 CP118132.1 Genbank gene 3043874 3044092 . + . ID=gene-PUW35_14830;Name=PUW35_14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14830 CP118132.1 Protein Homology CDS 3043874 3044092 . + 0 ID=cds-WJG91924.1;Parent=gene-PUW35_14830;Dbxref=NCBI_GP:WJG91924.1;Name=WJG91924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=PUW35_14830;product=YgdI/YgdR family lipoprotein;protein_id=WJG91924.1;transl_table=11 CP118132.1 Genbank gene 3044283 3045323 . + . ID=gene-PUW35_14835;Name=PUW35_14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14835 CP118132.1 Protein Homology CDS 3044283 3045323 . + 0 ID=cds-WJG91925.1;Parent=gene-PUW35_14835;Dbxref=NCBI_GP:WJG91925.1;Name=WJG91925.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=PUW35_14835;product=NADP(H)-dependent aldo-keto reductase;protein_id=WJG91925.1;transl_table=11 CP118132.1 Genbank gene 3045410 3046612 . - . ID=gene-PUW35_14840;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=PUW35_14840 CP118132.1 Protein Homology CDS 3045410 3046612 . - 0 ID=cds-WJG91926.1;Parent=gene-PUW35_14840;Dbxref=NCBI_GP:WJG91926.1;Name=WJG91926.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=PUW35_14840;product=lysophospholipid transporter LplT;protein_id=WJG91926.1;transl_table=11 CP118132.1 Genbank gene 3046605 3048764 . - . ID=gene-PUW35_14845;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=PUW35_14845 CP118132.1 Protein Homology CDS 3046605 3048764 . - 0 ID=cds-WJG91927.1;Parent=gene-PUW35_14845;Dbxref=NCBI_GP:WJG91927.1;Name=WJG91927.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=PUW35_14845;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WJG91927.1;transl_table=11 CP118132.1 Genbank gene 3049357 3050385 . + . ID=gene-PUW35_14850;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=PUW35_14850 CP118132.1 Protein Homology CDS 3049357 3050385 . + 0 ID=cds-WJG91928.1;Parent=gene-PUW35_14850;Dbxref=NCBI_GP:WJG91928.1;Name=WJG91928.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=PUW35_14850;product=HTH-type transcriptional regulator GalR;protein_id=WJG91928.1;transl_table=11 CP118132.1 Genbank gene 3050396 3051418 . + . ID=gene-PUW35_14855;Name=PUW35_14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14855 CP118132.1 Protein Homology CDS 3050396 3051418 . + 0 ID=cds-WJG95116.1;Parent=gene-PUW35_14855;Dbxref=NCBI_GP:WJG95116.1;Name=WJG95116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=PUW35_14855;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG95116.1;transl_table=11 CP118132.1 Genbank pseudogene 3051428 3052688 . - . ID=gene-PUW35_14860;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=pseudogene;locus_tag=PUW35_14860;pseudo=true CP118132.1 Protein Homology CDS 3051428 3052688 . - 0 ID=cds-PUW35_14860;Parent=gene-PUW35_14860;Note=frameshifted;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=PUW35_14860;product=diaminopimelate decarboxylase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3052806 3053741 . + . ID=gene-PUW35_14865;Name=PUW35_14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14865 CP118132.1 Protein Homology CDS 3052806 3053741 . + 0 ID=cds-WJG91929.1;Parent=gene-PUW35_14865;Dbxref=NCBI_GP:WJG91929.1;Name=WJG91929.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=PUW35_14865;product=LysR family transcriptional regulator;protein_id=WJG91929.1;transl_table=11 CP118132.1 Genbank gene 3053713 3054420 . - . ID=gene-PUW35_14870;Name=PUW35_14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14870 CP118132.1 Protein Homology CDS 3053713 3054420 . - 0 ID=cds-WJG91930.1;Parent=gene-PUW35_14870;Dbxref=NCBI_GP:WJG91930.1;Name=WJG91930.1;Ontology_term=GO:0006807,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=PUW35_14870;product=aspartate/glutamate racemase;protein_id=WJG91930.1;transl_table=11 CP118132.1 Genbank pseudogene 3054533 3055946 . - . ID=gene-PUW35_14875;Name=araE;gbkey=Gene;gene=araE;gene_biotype=pseudogene;locus_tag=PUW35_14875;pseudo=true CP118132.1 Protein Homology CDS 3054533 3055946 . - 0 ID=cds-PUW35_14875;Parent=gene-PUW35_14875;Note=frameshifted;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=PUW35_14875;product=arabinose-proton symporter AraE;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3056300 3057061 . - . ID=gene-PUW35_14880;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=pseudogene;locus_tag=PUW35_14880;pseudo=true CP118132.1 Protein Homology CDS 3056300 3057061 . - 0 ID=cds-PUW35_14880;Parent=gene-PUW35_14880;Note=internal stop;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=PUW35_14880;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3057118 3057954 . - . ID=gene-PUW35_14885;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=PUW35_14885 CP118132.1 Protein Homology CDS 3057118 3057954 . - 0 ID=cds-WJG91931.1;Parent=gene-PUW35_14885;Dbxref=NCBI_GP:WJG91931.1;Name=WJG91931.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=PUW35_14885;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WJG91931.1;transl_table=11 CP118132.1 Genbank gene 3058385 3059563 . - . ID=gene-PUW35_14890;Name=PUW35_14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14890 CP118132.1 Protein Homology CDS 3058385 3059563 . - 0 ID=cds-WJG91932.1;Parent=gene-PUW35_14890;Dbxref=NCBI_GP:WJG91932.1;Name=WJG91932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=PUW35_14890;product=acetyl-CoA C-acetyltransferase;protein_id=WJG91932.1;transl_table=11 CP118132.1 Genbank pseudogene 3059686 3060548 . - . ID=gene-PUW35_14895;Name=PUW35_14895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_14895;pseudo=true CP118132.1 Protein Homology CDS 3059686 3060548 . - 0 ID=cds-PUW35_14895;Parent=gene-PUW35_14895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=PUW35_14895;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3060652 3060780 . + . ID=gene-PUW35_14900;Name=PUW35_14900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_14900;pseudo=true CP118132.1 Protein Homology CDS 3060652 3060780 . + 0 ID=cds-PUW35_14900;Parent=gene-PUW35_14900;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=PUW35_14900;product=chlorhexidine efflux transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3060956 3061207 . + . ID=gene-PUW35_14905;Name=PUW35_14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14905 CP118132.1 Protein Homology CDS 3060956 3061207 . + 0 ID=cds-WJG95117.1;Parent=gene-PUW35_14905;Dbxref=NCBI_GP:WJG95117.1;Name=WJG95117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=PUW35_14905;product=hypothetical protein;protein_id=WJG95117.1;transl_table=11 CP118132.1 Genbank gene 3061487 3062293 . + . ID=gene-PUW35_14910;Name=PUW35_14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14910 CP118132.1 Protein Homology CDS 3061487 3062293 . + 0 ID=cds-WJG91933.1;Parent=gene-PUW35_14910;Dbxref=NCBI_GP:WJG91933.1;Name=WJG91933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=PUW35_14910;product=DUF1460 domain-containing protein;protein_id=WJG91933.1;transl_table=11 CP118132.1 Genbank gene 3062425 3062498 . - . ID=gene-PUW35_14915;Name=PUW35_14915;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_14915 CP118132.1 tRNAscan-SE tRNA 3062425 3062498 . - . ID=rna-PUW35_14915;Parent=gene-PUW35_14915;anticodon=(pos:complement(3062464..3062466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_14915;product=tRNA-Gly CP118132.1 tRNAscan-SE exon 3062425 3062498 . - . ID=exon-PUW35_14915-1;Parent=rna-PUW35_14915;anticodon=(pos:complement(3062464..3062466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_14915;product=tRNA-Gly CP118132.1 Genbank gene 3062578 3063336 . - . ID=gene-PUW35_14920;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=PUW35_14920 CP118132.1 Protein Homology CDS 3062578 3063336 . - 0 ID=cds-WJG91934.1;Parent=gene-PUW35_14920;Dbxref=NCBI_GP:WJG91934.1;Name=WJG91934.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=PUW35_14920;product=amidase activator ActS;protein_id=WJG91934.1;transl_table=11 CP118132.1 Genbank pseudogene 3063601 3064145 . + . ID=gene-PUW35_14925;Name=idi;gbkey=Gene;gene=idi;gene_biotype=pseudogene;locus_tag=PUW35_14925;pseudo=true CP118132.1 Protein Homology CDS 3063601 3064145 . + 0 ID=cds-PUW35_14925;Parent=gene-PUW35_14925;Note=frameshifted;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=PUW35_14925;product=isopentenyl-diphosphate Delta-isomerase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3064221 3065738 . - . ID=gene-PUW35_14930;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PUW35_14930 CP118132.1 Protein Homology CDS 3064221 3065738 . - 0 ID=cds-WJG91935.1;Parent=gene-PUW35_14930;Dbxref=NCBI_GP:WJG91935.1;Name=WJG91935.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=PUW35_14930;product=lysine--tRNA ligase;protein_id=WJG91935.1;transl_table=11 CP118132.1 Genbank gene 3065748 3066846 . - . ID=gene-PUW35_14935;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=PUW35_14935 CP118132.1 Protein Homology CDS 3066772 3066846 . - 0 ID=cds-WJG91936.1;Parent=gene-PUW35_14935;Dbxref=NCBI_GP:WJG91936.1;Name=WJG91936.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PUW35_14935;product=peptide chain release factor 2;protein_id=WJG91936.1;transl_table=11 CP118132.1 Protein Homology CDS 3065748 3066770 . - 0 ID=cds-WJG91936.1;Parent=gene-PUW35_14935;Dbxref=NCBI_GP:WJG91936.1;Name=WJG91936.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PUW35_14935;product=peptide chain release factor 2;protein_id=WJG91936.1;transl_table=11 CP118132.1 Genbank gene 3066951 3068684 . - . ID=gene-PUW35_14940;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=PUW35_14940 CP118132.1 Protein Homology CDS 3066951 3068684 . - 0 ID=cds-WJG91937.1;Parent=gene-PUW35_14940;Dbxref=NCBI_GP:WJG91937.1;Name=WJG91937.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=PUW35_14940;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WJG91937.1;transl_table=11 CP118132.1 Genbank gene 3068690 3069403 . - . ID=gene-PUW35_14945;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=PUW35_14945 CP118132.1 Protein Homology CDS 3068690 3069403 . - 0 ID=cds-WJG91938.1;Parent=gene-PUW35_14945;Dbxref=NCBI_GP:WJG91938.1;Name=WJG91938.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=PUW35_14945;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WJG91938.1;transl_table=11 CP118132.1 Genbank gene 3069427 3070323 . - . ID=gene-PUW35_14950;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=PUW35_14950 CP118132.1 Protein Homology CDS 3069427 3070323 . - 0 ID=cds-WJG91939.1;Parent=gene-PUW35_14950;Dbxref=NCBI_GP:WJG91939.1;Name=WJG91939.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=PUW35_14950;product=site-specific tyrosine recombinase XerD;protein_id=WJG91939.1;transl_table=11 CP118132.1 Genbank gene 3070436 3070957 . + . ID=gene-PUW35_14955;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=PUW35_14955 CP118132.1 Protein Homology CDS 3070436 3070957 . + 0 ID=cds-WJG91940.1;Parent=gene-PUW35_14955;Dbxref=NCBI_GP:WJG91940.1;Name=WJG91940.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=PUW35_14955;product=flavodoxin FldB;protein_id=WJG91940.1;transl_table=11 CP118132.1 Genbank gene 3071010 3071423 . - . ID=gene-PUW35_14960;Name=PUW35_14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14960 CP118132.1 Protein Homology CDS 3071010 3071423 . - 0 ID=cds-WJG91941.1;Parent=gene-PUW35_14960;Dbxref=NCBI_GP:WJG91941.1;Name=WJG91941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=PUW35_14960;product=protein YgfX;protein_id=WJG91941.1;transl_table=11 CP118132.1 Genbank gene 3071404 3071670 . - . ID=gene-PUW35_14965;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=PUW35_14965 CP118132.1 Protein Homology CDS 3071404 3071670 . - 0 ID=cds-WJG91942.1;Parent=gene-PUW35_14965;Dbxref=NCBI_GP:WJG91942.1;Name=WJG91942.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=PUW35_14965;product=FAD assembly factor SdhE;protein_id=WJG91942.1;transl_table=11 CP118132.1 Genbank gene 3071920 3072900 . + . ID=gene-PUW35_14970;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=PUW35_14970 CP118132.1 Protein Homology CDS 3071920 3072900 . + 0 ID=cds-WJG91943.1;Parent=gene-PUW35_14970;Dbxref=NCBI_GP:WJG91943.1;Name=WJG91943.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=PUW35_14970;product=tRNA-modifying protein YgfZ;protein_id=WJG91943.1;transl_table=11 CP118132.1 Genbank gene 3073016 3073675 . - . ID=gene-PUW35_14975;Name=PUW35_14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14975 CP118132.1 Protein Homology CDS 3073016 3073675 . - 0 ID=cds-WJG91944.1;Parent=gene-PUW35_14975;Dbxref=NCBI_GP:WJG91944.1;Name=WJG91944.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=PUW35_14975;product=hemolysin III family protein;protein_id=WJG91944.1;transl_table=11 CP118132.1 Genbank gene 3073839 3074150 . - . ID=gene-PUW35_14980;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=PUW35_14980 CP118132.1 Protein Homology CDS 3073839 3074150 . - 0 ID=cds-WJG91945.1;Parent=gene-PUW35_14980;Dbxref=NCBI_GP:WJG91945.1;Name=WJG91945.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=PUW35_14980;product=N(4)-acetylcytidine aminohydrolase;protein_id=WJG91945.1;transl_table=11 CP118132.1 Genbank pseudogene 3074308 3075740 . + . ID=gene-PUW35_14985;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=pseudogene;locus_tag=PUW35_14985;pseudo=true CP118132.1 Protein Homology CDS 3074308 3075740 . + 0 ID=cds-PUW35_14985;Parent=gene-PUW35_14985;Note=frameshifted;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=PUW35_14985;product=6-phospho-beta-glucosidase BglA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3075788 3076681 . - . ID=gene-PUW35_14990;Name=PUW35_14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_14990 CP118132.1 Protein Homology CDS 3075788 3076681 . - 0 ID=cds-WJG91946.1;Parent=gene-PUW35_14990;Dbxref=NCBI_GP:WJG91946.1;Name=WJG91946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=PUW35_14990;product=transporter;protein_id=WJG91946.1;transl_table=11 CP118132.1 Genbank gene 3077137 3080010 . - . ID=gene-PUW35_14995;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=PUW35_14995 CP118132.1 Protein Homology CDS 3077137 3080010 . - 0 ID=cds-WJG91947.1;Parent=gene-PUW35_14995;Dbxref=NCBI_GP:WJG91947.1;Name=WJG91947.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=PUW35_14995;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WJG91947.1;transl_table=11 CP118132.1 Genbank gene 3080173 3080562 . - . ID=gene-PUW35_15000;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=PUW35_15000 CP118132.1 Protein Homology CDS 3080173 3080562 . - 0 ID=cds-WJG91948.1;Parent=gene-PUW35_15000;Dbxref=NCBI_GP:WJG91948.1;Name=WJG91948.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=PUW35_15000;product=glycine cleavage system protein GcvH;protein_id=WJG91948.1;transl_table=11 CP118132.1 Genbank gene 3080588 3081682 . - . ID=gene-PUW35_15005;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=PUW35_15005 CP118132.1 Protein Homology CDS 3080588 3081682 . - 0 ID=cds-WJG91949.1;Parent=gene-PUW35_15005;Dbxref=NCBI_GP:WJG91949.1;Name=WJG91949.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=PUW35_15005;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WJG91949.1;transl_table=11 CP118132.1 Genbank gene 3082137 3083339 . - . ID=gene-PUW35_15010;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=PUW35_15010 CP118132.1 Protein Homology CDS 3082137 3083339 . - 0 ID=cds-WJG91950.1;Parent=gene-PUW35_15010;Dbxref=NCBI_GP:WJG91950.1;Name=WJG91950.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=PUW35_15010;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WJG91950.1;transl_table=11 CP118132.1 Genbank gene 3083465 3084643 . - . ID=gene-PUW35_15015;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=PUW35_15015 CP118132.1 Protein Homology CDS 3083465 3084643 . - 0 ID=cds-WJG91951.1;Parent=gene-PUW35_15015;Dbxref=NCBI_GP:WJG91951.1;Name=WJG91951.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=PUW35_15015;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WJG91951.1;transl_table=11 CP118132.1 Genbank gene 3084640 3085956 . - . ID=gene-PUW35_15020;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=PUW35_15020 CP118132.1 Protein Homology CDS 3084640 3085956 . - 0 ID=cds-WJG91952.1;Parent=gene-PUW35_15020;Dbxref=NCBI_GP:WJG91952.1;Name=WJG91952.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=PUW35_15020;product=Xaa-Pro aminopeptidase;protein_id=WJG91952.1;transl_table=11 CP118132.1 Genbank gene 3085982 3086560 . - . ID=gene-PUW35_15025;Name=PUW35_15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15025 CP118132.1 Protein Homology CDS 3085982 3086560 . - 0 ID=cds-WJG91953.1;Parent=gene-PUW35_15025;Dbxref=NCBI_GP:WJG91953.1;Name=WJG91953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=PUW35_15025;product=YecA family protein;protein_id=WJG91953.1;transl_table=11 CP118132.1 Genbank gene 3086727 3087056 . + . ID=gene-PUW35_15030;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=PUW35_15030 CP118132.1 Protein Homology CDS 3086727 3087056 . + 0 ID=cds-WJG91954.1;Parent=gene-PUW35_15030;Dbxref=NCBI_GP:WJG91954.1;Name=WJG91954.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=PUW35_15030;product=cell division protein ZapA;protein_id=WJG91954.1;transl_table=11 CP118132.1 Genbank gene 3087098 3087281 . + . ID=gene-PUW35_15035;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=PUW35_15035 CP118132.1 cmsearch ncRNA 3087098 3087281 . + . ID=rna-PUW35_15035;Parent=gene-PUW35_15035;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_15035;product=6S RNA CP118132.1 cmsearch exon 3087098 3087281 . + . ID=exon-PUW35_15035-1;Parent=rna-PUW35_15035;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_15035;product=6S RNA CP118132.1 Genbank gene 3087302 3087898 . + . ID=gene-PUW35_15040;Name=PUW35_15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15040 CP118132.1 Protein Homology CDS 3087302 3087898 . + 0 ID=cds-WJG91955.1;Parent=gene-PUW35_15040;Dbxref=NCBI_GP:WJG91955.1;Name=WJG91955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=PUW35_15040;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WJG91955.1;transl_table=11 CP118132.1 Genbank gene 3088279 3089511 . - . ID=gene-PUW35_15045;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=PUW35_15045 CP118132.1 Protein Homology CDS 3088279 3089511 . - 0 ID=cds-WJG91956.1;Parent=gene-PUW35_15045;Dbxref=NCBI_GP:WJG91956.1;Name=WJG91956.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=PUW35_15045;product=phosphoglycerate dehydrogenase;protein_id=WJG91956.1;transl_table=11 CP118132.1 Genbank gene 3089778 3090437 . - . ID=gene-PUW35_15050;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=PUW35_15050 CP118132.1 Protein Homology CDS 3089778 3090437 . - 0 ID=cds-WJG91957.1;Parent=gene-PUW35_15050;Dbxref=NCBI_GP:WJG91957.1;Name=WJG91957.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=PUW35_15050;product=ribose-5-phosphate isomerase RpiA;protein_id=WJG91957.1;transl_table=11 CP118132.1 Genbank gene 3090591 3091484 . + . ID=gene-PUW35_15055;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=PUW35_15055 CP118132.1 Protein Homology CDS 3090591 3091484 . + 0 ID=cds-WJG91958.1;Parent=gene-PUW35_15055;Dbxref=NCBI_GP:WJG91958.1;Name=WJG91958.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=PUW35_15055;product=DNA-binding transcriptional regulator ArgP;protein_id=WJG91958.1;transl_table=11 CP118132.1 Genbank gene 3091750 3092496 . - . ID=gene-PUW35_15060;Name=PUW35_15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15060 CP118132.1 Protein Homology CDS 3091750 3092496 . - 0 ID=cds-WJG91959.1;Parent=gene-PUW35_15060;Dbxref=NCBI_GP:WJG91959.1;Name=WJG91959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=PUW35_15060;product=oxidative stress defense protein;protein_id=WJG91959.1;transl_table=11 CP118132.1 Genbank gene 3092590 3093225 . - . ID=gene-PUW35_15065;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=PUW35_15065 CP118132.1 Protein Homology CDS 3092590 3093225 . - 0 ID=cds-WJG91960.1;Parent=gene-PUW35_15065;Dbxref=NCBI_GP:WJG91960.1;Name=WJG91960.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=PUW35_15065;product=arginine exporter ArgO;protein_id=WJG91960.1;transl_table=11 CP118132.1 Genbank gene 3093426 3094286 . - . ID=gene-PUW35_15070;Name=PUW35_15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15070 CP118132.1 Protein Homology CDS 3093426 3094286 . - 0 ID=cds-WJG91961.1;Parent=gene-PUW35_15070;Dbxref=NCBI_GP:WJG91961.1;Name=WJG91961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=PUW35_15070;product=small-conductance mechanosensitive channel MscS;protein_id=WJG91961.1;transl_table=11 CP118132.1 Genbank gene 3094519 3095598 . - . ID=gene-PUW35_15075;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=PUW35_15075 CP118132.1 Protein Homology CDS 3094519 3095598 . - 0 ID=cds-WJG91962.1;Parent=gene-PUW35_15075;Dbxref=NCBI_GP:WJG91962.1;Name=WJG91962.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=PUW35_15075;product=class II fructose-bisphosphate aldolase;protein_id=WJG91962.1;transl_table=11 CP118132.1 Genbank gene 3095699 3096862 . - . ID=gene-PUW35_15080;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=PUW35_15080 CP118132.1 Protein Homology CDS 3095699 3096862 . - 0 ID=cds-WJG91963.1;Parent=gene-PUW35_15080;Dbxref=NCBI_GP:WJG91963.1;Name=WJG91963.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=PUW35_15080;product=phosphoglycerate kinase;protein_id=WJG91963.1;transl_table=11 CP118132.1 Genbank gene 3096884 3097930 . - . ID=gene-PUW35_15085;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=PUW35_15085 CP118132.1 Protein Homology CDS 3096884 3097930 . - 0 ID=cds-WJG91964.1;Parent=gene-PUW35_15085;Dbxref=NCBI_GP:WJG91964.1;Name=WJG91964.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=PUW35_15085;product=erythrose-4-phosphate dehydrogenase;protein_id=WJG91964.1;transl_table=11 CP118132.1 Genbank gene 3098304 3098729 . + . ID=gene-PUW35_15090;Name=PUW35_15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15090 CP118132.1 Protein Homology CDS 3098304 3098729 . + 0 ID=cds-WJG91965.1;Parent=gene-PUW35_15090;Dbxref=NCBI_GP:WJG91965.1;Name=WJG91965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=PUW35_15090;product=DNA-binding protein;protein_id=WJG91965.1;transl_table=11 CP118132.1 Genbank gene 3098755 3099333 . + . ID=gene-PUW35_15095;Name=PUW35_15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15095 CP118132.1 Protein Homology CDS 3098755 3099333 . + 0 ID=cds-WJG91966.1;Parent=gene-PUW35_15095;Dbxref=NCBI_GP:WJG91966.1;Name=WJG91966.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=PUW35_15095;product=ECF transporter S component;protein_id=WJG91966.1;transl_table=11 CP118132.1 Genbank gene 3099334 3100041 . + . ID=gene-PUW35_15100;Name=PUW35_15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15100 CP118132.1 Protein Homology CDS 3099334 3100041 . + 0 ID=cds-WJG91967.1;Parent=gene-PUW35_15100;Dbxref=NCBI_GP:WJG91967.1;Name=WJG91967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=PUW35_15100;product=energy-coupling factor transporter transmembrane component T;protein_id=WJG91967.1;transl_table=11 CP118132.1 Genbank gene 3100029 3100706 . + . ID=gene-PUW35_15105;Name=PUW35_15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15105 CP118132.1 Protein Homology CDS 3100029 3100706 . + 0 ID=cds-WJG91968.1;Parent=gene-PUW35_15105;Dbxref=NCBI_GP:WJG91968.1;Name=WJG91968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=PUW35_15105;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WJG91968.1;transl_table=11 CP118132.1 Genbank gene 3100700 3101356 . + . ID=gene-PUW35_15110;Name=PUW35_15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15110 CP118132.1 Protein Homology CDS 3100700 3101356 . + 0 ID=cds-WJG91969.1;Parent=gene-PUW35_15110;Dbxref=NCBI_GP:WJG91969.1;Name=WJG91969.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=PUW35_15110;product=ATP-binding cassette domain-containing protein;protein_id=WJG91969.1;transl_table=11 CP118132.1 Genbank gene 3101400 3103391 . - . ID=gene-PUW35_15115;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PUW35_15115 CP118132.1 Protein Homology CDS 3101400 3103391 . - 0 ID=cds-WJG91970.1;Parent=gene-PUW35_15115;Dbxref=NCBI_GP:WJG91970.1;Name=WJG91970.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=PUW35_15115;product=transketolase;protein_id=WJG91970.1;transl_table=11 CP118132.1 Genbank gene 3103667 3104425 . + . ID=gene-PUW35_15120;Name=PUW35_15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15120 CP118132.1 Protein Homology CDS 3103667 3104425 . + 0 ID=cds-WJG91971.1;Parent=gene-PUW35_15120;Dbxref=NCBI_GP:WJG91971.1;Name=WJG91971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=PUW35_15120;product=M48 family metallopeptidase;protein_id=WJG91971.1;transl_table=11 CP118132.1 Genbank pseudogene 3104526 3105445 . - . ID=gene-PUW35_15125;Name=speB;gbkey=Gene;gene=speB;gene_biotype=pseudogene;locus_tag=PUW35_15125;pseudo=true CP118132.1 Protein Homology CDS 3104526 3105445 . - 0 ID=cds-PUW35_15125;Parent=gene-PUW35_15125;Note=frameshifted;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499737.1;locus_tag=PUW35_15125;product=agmatinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3105650 3106606 . - . ID=gene-PUW35_15130;Name=PUW35_15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15130 CP118132.1 Protein Homology CDS 3105650 3106606 . - 0 ID=cds-WJG91972.1;Parent=gene-PUW35_15130;Dbxref=NCBI_GP:WJG91972.1;Name=WJG91972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=PUW35_15130;product=alpha/beta hydrolase;protein_id=WJG91972.1;transl_table=11 CP118132.1 Genbank gene 3106799 3107293 . - . ID=gene-PUW35_15135;Name=PUW35_15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15135 CP118132.1 Protein Homology CDS 3106799 3107293 . - 0 ID=cds-WJG91973.1;Parent=gene-PUW35_15135;Dbxref=NCBI_GP:WJG91973.1;Name=WJG91973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839091.1;locus_tag=PUW35_15135;product=YhcH/YjgK/YiaL family protein;protein_id=WJG91973.1;transl_table=11 CP118132.1 Genbank gene 3107332 3108339 . - . ID=gene-PUW35_15140;Name=PUW35_15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15140 CP118132.1 Protein Homology CDS 3107332 3108339 . - 0 ID=cds-WJG91974.1;Parent=gene-PUW35_15140;Dbxref=NCBI_GP:WJG91974.1;Name=WJG91974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=PUW35_15140;product=Ldh family oxidoreductase;protein_id=WJG91974.1;transl_table=11 CP118132.1 Genbank gene 3108353 3109369 . - . ID=gene-PUW35_15145;Name=PUW35_15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15145 CP118132.1 Protein Homology CDS 3108353 3109369 . - 0 ID=cds-WJG91975.1;Parent=gene-PUW35_15145;Dbxref=NCBI_GP:WJG91975.1;Name=WJG91975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=PUW35_15145;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WJG91975.1;transl_table=11 CP118132.1 Genbank gene 3109372 3110844 . - . ID=gene-PUW35_15150;Name=PUW35_15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15150 CP118132.1 Protein Homology CDS 3109372 3110844 . - 0 ID=cds-WJG91976.1;Parent=gene-PUW35_15150;Dbxref=NCBI_GP:WJG91976.1;Name=WJG91976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=PUW35_15150;product=mannitol dehydrogenase family protein;protein_id=WJG91976.1;transl_table=11 CP118132.1 Genbank gene 3111493 3111708 . + . ID=gene-PUW35_15155;Name=PUW35_15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15155 CP118132.1 Protein Homology CDS 3111493 3111708 . + 0 ID=cds-WJG95118.1;Parent=gene-PUW35_15155;Dbxref=NCBI_GP:WJG95118.1;Name=WJG95118.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.2;locus_tag=PUW35_15155;product=hypothetical protein;protein_id=WJG95118.1;transl_table=11 CP118132.1 Genbank gene 3111684 3111752 . + . ID=gene-PUW35_15160;Name=PUW35_15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15160 CP118132.1 Protein Homology CDS 3111684 3111752 . + 0 ID=cds-WJG95119.1;Parent=gene-PUW35_15160;Dbxref=NCBI_GP:WJG95119.1;Name=WJG95119.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.2;locus_tag=PUW35_15160;product=hypothetical protein;protein_id=WJG95119.1;transl_table=11 CP118132.1 Genbank gene 3112067 3112867 . - . ID=gene-PUW35_15165;Name=PUW35_15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15165 CP118132.1 Protein Homology CDS 3112067 3112867 . - 0 ID=cds-WJG91977.1;Parent=gene-PUW35_15165;Dbxref=NCBI_GP:WJG91977.1;Name=WJG91977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=PUW35_15165;product=FadR/GntR family transcriptional regulator;protein_id=WJG91977.1;transl_table=11 CP118132.1 Genbank gene 3113021 3113752 . - . ID=gene-PUW35_15170;Name=PUW35_15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15170 CP118132.1 Protein Homology CDS 3113021 3113752 . - 0 ID=cds-WJG91978.1;Parent=gene-PUW35_15170;Dbxref=NCBI_GP:WJG91978.1;Name=WJG91978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=PUW35_15170;product=hypothetical protein;protein_id=WJG91978.1;transl_table=11 CP118132.1 Genbank gene 3113897 3115873 . - . ID=gene-PUW35_15175;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=PUW35_15175 CP118132.1 Protein Homology CDS 3113897 3115873 . - 0 ID=cds-WJG91979.1;Parent=gene-PUW35_15175;Dbxref=NCBI_GP:WJG91979.1;Name=WJG91979.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=PUW35_15175;product=biosynthetic arginine decarboxylase;protein_id=WJG91979.1;transl_table=11 CP118132.1 Genbank gene 3115882 3116013 . - . ID=gene-PUW35_15180;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=PUW35_15180 CP118132.1 Protein Homology CDS 3115882 3116013 . - 0 ID=cds-WJG91980.1;Parent=gene-PUW35_15180;Dbxref=NCBI_GP:WJG91980.1;Name=WJG91980.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=PUW35_15180;product=acid stress response protein YqgB;protein_id=WJG91980.1;transl_table=11 CP118132.1 Genbank gene 3116099 3116248 . - . ID=gene-PUW35_15185;Name=PUW35_15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15185 CP118132.1 Protein Homology CDS 3116099 3116248 . - 0 ID=cds-WJG91981.1;Parent=gene-PUW35_15185;Dbxref=NCBI_GP:WJG91981.1;Name=WJG91981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=PUW35_15185;product=hypothetical protein;protein_id=WJG91981.1;transl_table=11 CP118132.1 Genbank gene 3116308 3116607 . - . ID=gene-PUW35_15190;Name=PUW35_15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15190 CP118132.1 GeneMarkS-2+ CDS 3116308 3116607 . - 0 ID=cds-WJG91982.1;Parent=gene-PUW35_15190;Dbxref=NCBI_GP:WJG91982.1;Name=WJG91982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_15190;product=hypothetical protein;protein_id=WJG91982.1;transl_table=11 CP118132.1 Genbank pseudogene 3116663 3117816 . + . ID=gene-PUW35_15195;Name=metK;gbkey=Gene;gene=metK;gene_biotype=pseudogene;locus_tag=PUW35_15195;pseudo=true CP118132.1 Protein Homology CDS 3116663 3117816 . + 0 ID=cds-PUW35_15195;Parent=gene-PUW35_15195;Note=frameshifted;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=PUW35_15195;product=methionine adenosyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3118309 3119703 . + . ID=gene-PUW35_15200;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=PUW35_15200 CP118132.1 Protein Homology CDS 3118309 3119703 . + 0 ID=cds-WJG91983.1;Parent=gene-PUW35_15200;Dbxref=NCBI_GP:WJG91983.1;Name=WJG91983.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=PUW35_15200;product=galactose/proton symporter;protein_id=WJG91983.1;transl_table=11 CP118132.1 Genbank gene 3119782 3120279 . + . ID=gene-PUW35_15205;Name=PUW35_15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15205 CP118132.1 Protein Homology CDS 3119782 3120279 . + 0 ID=cds-WJG91984.1;Parent=gene-PUW35_15205;Dbxref=NCBI_GP:WJG91984.1;Name=WJG91984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=PUW35_15205;product=SprT family zinc-dependent metalloprotease;protein_id=WJG91984.1;transl_table=11 CP118132.1 Genbank gene 3120375 3121082 . + . ID=gene-PUW35_15210;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=PUW35_15210 CP118132.1 Protein Homology CDS 3120375 3121082 . + 0 ID=cds-WJG91985.1;Parent=gene-PUW35_15210;Dbxref=NCBI_GP:WJG91985.1;Name=WJG91985.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=PUW35_15210;product=deoxyribonuclease I;protein_id=WJG91985.1;transl_table=11 CP118132.1 Genbank gene 3121159 3121890 . + . ID=gene-PUW35_15215;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=PUW35_15215 CP118132.1 Protein Homology CDS 3121159 3121890 . + 0 ID=cds-WJG91986.1;Parent=gene-PUW35_15215;Dbxref=NCBI_GP:WJG91986.1;Name=WJG91986.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=PUW35_15215;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WJG91986.1;transl_table=11 CP118132.1 Genbank gene 3121910 3122857 . + . ID=gene-PUW35_15220;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=PUW35_15220 CP118132.1 Protein Homology CDS 3121910 3122857 . + 0 ID=cds-WJG91987.1;Parent=gene-PUW35_15220;Dbxref=NCBI_GP:WJG91987.1;Name=WJG91987.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=PUW35_15220;product=glutathione synthase;protein_id=WJG91987.1;transl_table=11 CP118132.1 Genbank gene 3123073 3123636 . + . ID=gene-PUW35_15225;Name=PUW35_15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15225 CP118132.1 Protein Homology CDS 3123073 3123636 . + 0 ID=cds-WJG91988.1;Parent=gene-PUW35_15225;Dbxref=NCBI_GP:WJG91988.1;Name=WJG91988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=PUW35_15225;product=YqgE/AlgH family protein;protein_id=WJG91988.1;transl_table=11 CP118132.1 Genbank gene 3123636 3124052 . + . ID=gene-PUW35_15230;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=PUW35_15230 CP118132.1 Protein Homology CDS 3123636 3124052 . + 0 ID=cds-WJG91989.1;Parent=gene-PUW35_15230;Dbxref=NCBI_GP:WJG91989.1;Name=WJG91989.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=PUW35_15230;product=Holliday junction resolvase RuvX;protein_id=WJG91989.1;transl_table=11 CP118132.1 Genbank gene 3124099 3124785 . - . ID=gene-PUW35_15235;Name=PUW35_15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15235 CP118132.1 Protein Homology CDS 3124099 3124785 . - 0 ID=cds-WJG91990.1;Parent=gene-PUW35_15235;Dbxref=NCBI_GP:WJG91990.1;Name=WJG91990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=PUW35_15235;product=IclR family transcriptional regulator;protein_id=WJG91990.1;transl_table=11 CP118132.1 Genbank gene 3124917 3125897 . - . ID=gene-PUW35_15240;Name=PUW35_15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15240 CP118132.1 Protein Homology CDS 3124917 3125897 . - 0 ID=cds-WJG91991.1;Parent=gene-PUW35_15240;Dbxref=NCBI_GP:WJG91991.1;Name=WJG91991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=PUW35_15240;product=type IV pilus twitching motility protein PilT;protein_id=WJG91991.1;transl_table=11 CP118132.1 Genbank pseudogene 3125915 3126618 . + . ID=gene-PUW35_15245;Name=PUW35_15245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15245;pseudo=true CP118132.1 Protein Homology CDS 3125915 3126618 . + 0 ID=cds-PUW35_15245;Parent=gene-PUW35_15245;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=PUW35_15245;product=YggS family pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3126637 3127203 . + . ID=gene-PUW35_15250;Name=PUW35_15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15250 CP118132.1 Protein Homology CDS 3126637 3127203 . + 0 ID=cds-WJG91992.1;Parent=gene-PUW35_15250;Dbxref=NCBI_GP:WJG91992.1;Name=WJG91992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=PUW35_15250;product=YggT family protein;protein_id=WJG91992.1;transl_table=11 CP118132.1 Genbank gene 3127200 3127490 . + . ID=gene-PUW35_15255;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=PUW35_15255 CP118132.1 Protein Homology CDS 3127200 3127490 . + 0 ID=cds-WJG91993.1;Parent=gene-PUW35_15255;Dbxref=NCBI_GP:WJG91993.1;Name=WJG91993.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=PUW35_15255;product=DUF167 family protein YggU;protein_id=WJG91993.1;transl_table=11 CP118132.1 Genbank gene 3127498 3128091 . + . ID=gene-PUW35_15260;Name=PUW35_15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15260 CP118132.1 Protein Homology CDS 3127498 3128091 . + 0 ID=cds-WJG91994.1;Parent=gene-PUW35_15260;Dbxref=NCBI_GP:WJG91994.1;Name=WJG91994.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=PUW35_15260;product=XTP/dITP diphosphatase;protein_id=WJG91994.1;transl_table=11 CP118132.1 Genbank gene 3128084 3129220 . + . ID=gene-PUW35_15265;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=PUW35_15265 CP118132.1 Protein Homology CDS 3128084 3129220 . + 0 ID=cds-WJG91995.1;Parent=gene-PUW35_15265;Dbxref=NCBI_GP:WJG91995.1;Name=WJG91995.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=PUW35_15265;product=radical SAM family heme chaperone HemW;protein_id=WJG91995.1;transl_table=11 CP118132.1 Genbank pseudogene 3129311 3130318 . - . ID=gene-PUW35_15270;Name=PUW35_15270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15270;pseudo=true CP118132.1 Protein Homology CDS 3129311 3130318 . - 0 ID=cds-PUW35_15270;Parent=gene-PUW35_15270;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=PUW35_15270;product=DUF1202 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3130451 3131497 . - . ID=gene-PUW35_15275;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=PUW35_15275 CP118132.1 Protein Homology CDS 3130451 3131497 . - 0 ID=cds-WJG91996.1;Parent=gene-PUW35_15275;Dbxref=NCBI_GP:WJG91996.1;Name=WJG91996.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=PUW35_15275;product=L-asparaginase 2;protein_id=WJG91996.1;transl_table=11 CP118132.1 Genbank pseudogene 3131686 3132404 . - . ID=gene-PUW35_15280;Name=PUW35_15280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15280;pseudo=true CP118132.1 Protein Homology CDS 3131686 3132404 . - 0 ID=cds-PUW35_15280;Parent=gene-PUW35_15280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=PUW35_15280;product=DUF2884 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3132454 3132780 . - . ID=gene-PUW35_15285;Name=PUW35_15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15285 CP118132.1 Protein Homology CDS 3132454 3132780 . - 0 ID=cds-WJG91997.1;Parent=gene-PUW35_15285;Dbxref=NCBI_GP:WJG91997.1;Name=WJG91997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=PUW35_15285;product=YggL family protein;protein_id=WJG91997.1;transl_table=11 CP118132.1 Genbank gene 3132780 3133499 . - . ID=gene-PUW35_15290;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=PUW35_15290 CP118132.1 Protein Homology CDS 3132780 3133499 . - 0 ID=cds-WJG91998.1;Parent=gene-PUW35_15290;Dbxref=NCBI_GP:WJG91998.1;Name=WJG91998.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=PUW35_15290;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WJG91998.1;transl_table=11 CP118132.1 Genbank gene 3133654 3134706 . + . ID=gene-PUW35_15295;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=PUW35_15295 CP118132.1 Protein Homology CDS 3133654 3134706 . + 0 ID=cds-WJG91999.1;Parent=gene-PUW35_15295;Dbxref=NCBI_GP:WJG91999.1;Name=WJG91999.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=PUW35_15295;product=A/G-specific adenine glycosylase;protein_id=WJG91999.1;transl_table=11 CP118132.1 Genbank gene 3134734 3135009 . + . ID=gene-PUW35_15300;Name=PUW35_15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15300 CP118132.1 Protein Homology CDS 3134734 3135009 . + 0 ID=cds-WJG92000.1;Parent=gene-PUW35_15300;Dbxref=NCBI_GP:WJG92000.1;Name=WJG92000.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=PUW35_15300;product=oxidative damage protection protein;protein_id=WJG92000.1;transl_table=11 CP118132.1 Genbank gene 3135122 3136207 . + . ID=gene-PUW35_15305;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=PUW35_15305 CP118132.1 Protein Homology CDS 3135122 3136207 . + 0 ID=cds-WJG92001.1;Parent=gene-PUW35_15305;Dbxref=NCBI_GP:WJG92001.1;Name=WJG92001.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=PUW35_15305;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WJG92001.1;transl_table=11 CP118132.1 Genbank gene 3136424 3137680 . + . ID=gene-PUW35_15310;Name=PUW35_15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15310 CP118132.1 Protein Homology CDS 3136424 3137680 . + 0 ID=cds-WJG92002.1;Parent=gene-PUW35_15310;Dbxref=NCBI_GP:WJG92002.1;Name=WJG92002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=PUW35_15310;product=nucleoside permease;protein_id=WJG92002.1;transl_table=11 CP118132.1 Genbank pseudogene 3137742 3139873 . - . ID=gene-PUW35_15315;Name=PUW35_15315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15315;pseudo=true CP118132.1 Protein Homology CDS 3137742 3139873 . - 0 ID=cds-PUW35_15315;Parent=gene-PUW35_15315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=PUW35_15315;product=ornithine decarboxylase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3140298 3141005 . + . ID=gene-PUW35_15320;Name=PUW35_15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15320 CP118132.1 Protein Homology CDS 3140298 3141005 . + 0 ID=cds-WJG92003.1;Parent=gene-PUW35_15320;Dbxref=NCBI_GP:WJG92003.1;Name=WJG92003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=PUW35_15320;product=DUF554 domain-containing protein;protein_id=WJG92003.1;transl_table=11 CP118132.1 Genbank gene 3141111 3141186 . + . ID=gene-PUW35_15325;Name=PUW35_15325;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_15325 CP118132.1 tRNAscan-SE tRNA 3141111 3141186 . + . ID=rna-PUW35_15325;Parent=gene-PUW35_15325;anticodon=(pos:3141144..3141146);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_15325;product=tRNA-Phe CP118132.1 tRNAscan-SE exon 3141111 3141186 . + . ID=exon-PUW35_15325-1;Parent=rna-PUW35_15325;anticodon=(pos:3141144..3141146);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_15325;product=tRNA-Phe CP118132.1 Genbank gene 3141345 3141725 . - . ID=gene-PUW35_15330;Name=PUW35_15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15330 CP118132.1 Protein Homology CDS 3141345 3141725 . - 0 ID=cds-WJG92004.1;Parent=gene-PUW35_15330;Dbxref=NCBI_GP:WJG92004.1;Name=WJG92004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=PUW35_15330;product=VOC family protein;protein_id=WJG92004.1;transl_table=11 CP118132.1 Genbank gene 3141789 3143114 . - . ID=gene-PUW35_15335;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=PUW35_15335 CP118132.1 Protein Homology CDS 3141789 3143114 . - 0 ID=cds-WJG92005.1;Parent=gene-PUW35_15335;Dbxref=NCBI_GP:WJG92005.1;Name=WJG92005.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=PUW35_15335;product=itaconate CoA-transferase RipA/Ict;protein_id=WJG92005.1;transl_table=11 CP118132.1 Genbank pseudogene 3143139 3143665 . - . ID=gene-PUW35_15340;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=pseudogene;locus_tag=PUW35_15340;pseudo=true CP118132.1 Protein Homology CDS 3143139 3143665 . - 0 ID=cds-PUW35_15340;Parent=gene-PUW35_15340;Note=Second step in itaconate degradation.%3B frameshifted;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=PUW35_15340;product=(R)-specific enoyl-CoA hydratase RipB/Ich;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3143689 3144531 . - . ID=gene-PUW35_15345;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=PUW35_15345 CP118132.1 Protein Homology CDS 3143689 3144531 . - 0 ID=cds-WJG92006.1;Parent=gene-PUW35_15345;Dbxref=NCBI_GP:WJG92006.1;Name=WJG92006.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=PUW35_15345;product=itaconate degradation C-C-lyase RipC;protein_id=WJG92006.1;transl_table=11 CP118132.1 Genbank gene 3144623 3145501 . + . ID=gene-PUW35_15350;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=PUW35_15350 CP118132.1 Protein Homology CDS 3144623 3145501 . + 0 ID=cds-WJG92007.1;Parent=gene-PUW35_15350;Dbxref=NCBI_GP:WJG92007.1;Name=WJG92007.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=PUW35_15350;product=itaconate degradation transcriptional regulator RipR;protein_id=WJG92007.1;transl_table=11 CP118132.1 Genbank gene 3145549 3147288 . - . ID=gene-PUW35_15355;Name=PUW35_15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15355 CP118132.1 Protein Homology CDS 3145549 3147288 . - 0 ID=cds-WJG92008.1;Parent=gene-PUW35_15355;Dbxref=NCBI_GP:WJG92008.1;Name=WJG92008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=PUW35_15355;product=arylsulfatase;protein_id=WJG92008.1;transl_table=11 CP118132.1 Genbank pseudogene 3147357 3148539 . - . ID=gene-PUW35_15360;Name=PUW35_15360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15360;pseudo=true CP118132.1 Protein Homology CDS 3147357 3148539 . - 0 ID=cds-PUW35_15360;Parent=gene-PUW35_15360;Note=frameshifted;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=PUW35_15360;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3149051 3149734 . + . ID=gene-PUW35_15365;Name=PUW35_15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15365 CP118132.1 Protein Homology CDS 3149051 3149734 . + 0 ID=cds-WJG95120.1;Parent=gene-PUW35_15365;Dbxref=NCBI_GP:WJG95120.1;Name=WJG95120.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=PUW35_15365;product=LuxR C-terminal-related transcriptional regulator;protein_id=WJG95120.1;transl_table=11 CP118132.1 Genbank gene 3149838 3150395 . - . ID=gene-PUW35_15370;Name=PUW35_15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15370 CP118132.1 Protein Homology CDS 3149838 3150395 . - 0 ID=cds-WJG92009.1;Parent=gene-PUW35_15370;Dbxref=NCBI_GP:WJG92009.1;Name=WJG92009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=PUW35_15370;product=DUF3156 family protein;protein_id=WJG92009.1;transl_table=11 CP118132.1 Genbank gene 3150373 3151872 . - . ID=gene-PUW35_15375;Name=PUW35_15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15375 CP118132.1 Protein Homology CDS 3150373 3151872 . - 0 ID=cds-WJG92010.1;Parent=gene-PUW35_15375;Dbxref=NCBI_GP:WJG92010.1;Name=WJG92010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=PUW35_15375;product=APC family permease;protein_id=WJG92010.1;transl_table=11 CP118132.1 Genbank gene 3152081 3152455 . - . ID=gene-PUW35_15380;Name=PUW35_15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15380 CP118132.1 Protein Homology CDS 3152081 3152455 . - 0 ID=cds-WJG92011.1;Parent=gene-PUW35_15380;Dbxref=NCBI_GP:WJG92011.1;Name=WJG92011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=PUW35_15380;product=cupin domain-containing protein;protein_id=WJG92011.1;transl_table=11 CP118132.1 Genbank pseudogene 3152470 3153770 . - . ID=gene-PUW35_15385;Name=PUW35_15385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15385;pseudo=true CP118132.1 Protein Homology CDS 3152470 3153770 . - 0 ID=cds-PUW35_15385;Parent=gene-PUW35_15385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=PUW35_15385;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3153932 3155416 . + . ID=gene-PUW35_15390;Name=PUW35_15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15390 CP118132.1 Protein Homology CDS 3153932 3155416 . + 0 ID=cds-WJG92012.1;Parent=gene-PUW35_15390;Dbxref=NCBI_GP:WJG92012.1;Name=WJG92012.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=PUW35_15390;product=aldehyde dehydrogenase family protein;protein_id=WJG92012.1;transl_table=11 CP118132.1 Genbank gene 3155552 3155932 . - . ID=gene-PUW35_15395;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=PUW35_15395 CP118132.1 Protein Homology CDS 3155552 3155932 . - 0 ID=cds-WJG95121.1;Parent=gene-PUW35_15395;Dbxref=NCBI_GP:WJG95121.1;Name=WJG95121.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=PUW35_15395;product=anti-adapter protein IraD;protein_id=WJG95121.1;transl_table=11 CP118132.1 Genbank gene 3155932 3156417 . - . ID=gene-PUW35_15400;Name=PUW35_15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15400 CP118132.1 Protein Homology CDS 3155932 3156417 . - 0 ID=cds-WJG92013.1;Parent=gene-PUW35_15400;Dbxref=NCBI_GP:WJG92013.1;Name=WJG92013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=PUW35_15400;product=Hcp family type VI secretion system effector;protein_id=WJG92013.1;transl_table=11 CP118132.1 Genbank gene 3157143 3158066 . - . ID=gene-PUW35_15405;Name=PUW35_15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15405 CP118132.1 Protein Homology CDS 3157143 3158066 . - 0 ID=cds-WJG92014.1;Parent=gene-PUW35_15405;Dbxref=NCBI_GP:WJG92014.1;Name=WJG92014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=PUW35_15405;product=polysaccharide deacetylase;protein_id=WJG92014.1;transl_table=11 CP118132.1 Genbank gene 3158105 3158983 . - . ID=gene-PUW35_15410;Name=PUW35_15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15410 CP118132.1 Protein Homology CDS 3158105 3158983 . - 0 ID=cds-WJG92015.1;Parent=gene-PUW35_15410;Dbxref=NCBI_GP:WJG92015.1;Name=WJG92015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=PUW35_15410;product=carbon-nitrogen hydrolase family protein;protein_id=WJG92015.1;transl_table=11 CP118132.1 Genbank gene 3159379 3160683 . - . ID=gene-PUW35_15415;Name=PUW35_15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15415 CP118132.1 Protein Homology CDS 3159379 3160683 . - 0 ID=cds-WJG92016.1;Parent=gene-PUW35_15415;Dbxref=NCBI_GP:WJG92016.1;Name=WJG92016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=PUW35_15415;product=MFS transporter;protein_id=WJG92016.1;transl_table=11 CP118132.1 Genbank gene 3161088 3162272 . + . ID=gene-PUW35_15420;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=PUW35_15420 CP118132.1 Protein Homology CDS 3161088 3162272 . + 0 ID=cds-WJG92017.1;Parent=gene-PUW35_15420;Dbxref=NCBI_GP:WJG92017.1;Name=WJG92017.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=PUW35_15420;product=mannonate dehydratase;protein_id=WJG92017.1;transl_table=11 CP118132.1 Genbank gene 3162383 3163855 . + . ID=gene-PUW35_15425;Name=PUW35_15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15425 CP118132.1 Protein Homology CDS 3162383 3163855 . + 0 ID=cds-WJG92018.1;Parent=gene-PUW35_15425;Dbxref=NCBI_GP:WJG92018.1;Name=WJG92018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=PUW35_15425;product=fructuronate reductase;protein_id=WJG92018.1;transl_table=11 CP118132.1 Genbank gene 3163867 3165279 . + . ID=gene-PUW35_15430;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=PUW35_15430 CP118132.1 Protein Homology CDS 3163867 3165279 . + 0 ID=cds-WJG92019.1;Parent=gene-PUW35_15430;Dbxref=NCBI_GP:WJG92019.1;Name=WJG92019.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=PUW35_15430;product=glucuronate isomerase;protein_id=WJG92019.1;transl_table=11 CP118132.1 Genbank gene 3165579 3166634 . - . ID=gene-PUW35_15435;Name=PUW35_15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15435 CP118132.1 Protein Homology CDS 3165579 3166634 . - 0 ID=cds-WJG92020.1;Parent=gene-PUW35_15435;Dbxref=NCBI_GP:WJG92020.1;Name=WJG92020.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=PUW35_15435;product=methyl-accepting chemotaxis protein;protein_id=WJG92020.1;transl_table=11 CP118132.1 Genbank pseudogene 3167304 3169159 . - . ID=gene-PUW35_15440;Name=gss;gbkey=Gene;gene=gss;gene_biotype=pseudogene;locus_tag=PUW35_15440;pseudo=true CP118132.1 Protein Homology CDS 3167304 3169159 . - 0 ID=cds-PUW35_15440;Parent=gene-PUW35_15440;Note=frameshifted;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=PUW35_15440;product=bifunctional glutathionylspermidine amidase/synthase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3169386 3170251 . + . ID=gene-PUW35_15445;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=pseudogene;locus_tag=PUW35_15445;pseudo=true CP118132.1 Protein Homology CDS 3169386 3170251 . + 0 ID=cds-PUW35_15445;Parent=gene-PUW35_15445;Note=frameshifted;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=PUW35_15445;product=glutathione-dependent disulfide-bond oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3170319 3171029 . - . ID=gene-PUW35_15450;Name=PUW35_15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15450 CP118132.1 Protein Homology CDS 3170319 3171029 . - 0 ID=cds-WJG92021.1;Parent=gene-PUW35_15450;Dbxref=NCBI_GP:WJG92021.1;Name=WJG92021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=PUW35_15450;product=molybdate ABC transporter substrate-binding protein;protein_id=WJG92021.1;transl_table=11 CP118132.1 Genbank gene 3171029 3172081 . - . ID=gene-PUW35_15455;Name=PUW35_15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15455 CP118132.1 Protein Homology CDS 3171029 3172081 . - 0 ID=cds-WJG92022.1;Parent=gene-PUW35_15455;Dbxref=NCBI_GP:WJG92022.1;Name=WJG92022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=PUW35_15455;product=ABC transporter substrate-binding protein;protein_id=WJG92022.1;transl_table=11 CP118132.1 Genbank gene 3172157 3172405 . - . ID=gene-PUW35_15460;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=PUW35_15460 CP118132.1 Protein Homology CDS 3172157 3172405 . - 0 ID=cds-WJG92023.1;Parent=gene-PUW35_15460;Dbxref=NCBI_GP:WJG92023.1;Name=WJG92023.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=PUW35_15460;product=hydrogenase maturation factor HybG;protein_id=WJG92023.1;transl_table=11 CP118132.1 Genbank gene 3172433 3172774 . - . ID=gene-PUW35_15465;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW35_15465 CP118132.1 Protein Homology CDS 3172433 3172774 . - 0 ID=cds-WJG92024.1;Parent=gene-PUW35_15465;Dbxref=NCBI_GP:WJG92024.1;Name=WJG92024.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=PUW35_15465;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJG92024.1;transl_table=11 CP118132.1 Genbank gene 3172767 3173255 . - . ID=gene-PUW35_15470;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=PUW35_15470 CP118132.1 Protein Homology CDS 3172767 3173255 . - 0 ID=cds-WJG92025.1;Parent=gene-PUW35_15470;Dbxref=NCBI_GP:WJG92025.1;Name=WJG92025.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=PUW35_15470;product=hydrogenase-2 assembly chaperone;protein_id=WJG92025.1;transl_table=11 CP118132.1 Genbank gene 3173248 3173742 . - . ID=gene-PUW35_15475;Name=PUW35_15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15475 CP118132.1 Protein Homology CDS 3173248 3173742 . - 0 ID=cds-WJG92026.1;Parent=gene-PUW35_15475;Dbxref=NCBI_GP:WJG92026.1;Name=WJG92026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=PUW35_15475;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WJG92026.1;transl_table=11 CP118132.1 Genbank gene 3173742 3175445 . - . ID=gene-PUW35_15480;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=PUW35_15480 CP118132.1 Protein Homology CDS 3173742 3175445 . - 0 ID=cds-WJG92027.1;Parent=gene-PUW35_15480;Dbxref=NCBI_GP:WJG92027.1;Name=WJG92027.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=PUW35_15480;product=hydrogenase 2 large subunit;protein_id=WJG92027.1;transl_table=11 CP118132.1 Genbank gene 3175442 3176620 . - . ID=gene-PUW35_15485;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=PUW35_15485 CP118132.1 Protein Homology CDS 3175442 3176620 . - 0 ID=cds-WJG92028.1;Parent=gene-PUW35_15485;Dbxref=NCBI_GP:WJG92028.1;Name=WJG92028.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=PUW35_15485;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WJG92028.1;transl_table=11 CP118132.1 Genbank gene 3176610 3177596 . - . ID=gene-PUW35_15490;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=PUW35_15490 CP118132.1 Protein Homology CDS 3176610 3177596 . - 0 ID=cds-WJG92029.1;Parent=gene-PUW35_15490;Dbxref=NCBI_GP:WJG92029.1;Name=WJG92029.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=PUW35_15490;product=hydrogenase 2 operon protein HybA;protein_id=WJG92029.1;transl_table=11 CP118132.1 Genbank gene 3177599 3178717 . - . ID=gene-PUW35_15495;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=PUW35_15495 CP118132.1 Protein Homology CDS 3177599 3178717 . - 0 ID=cds-WJG92030.1;Parent=gene-PUW35_15495;Dbxref=NCBI_GP:WJG92030.1;Name=WJG92030.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=PUW35_15495;product=hydrogenase 2 small subunit;protein_id=WJG92030.1;transl_table=11 CP118132.1 Genbank gene 3178907 3179194 . - . ID=gene-PUW35_15500;Name=PUW35_15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15500 CP118132.1 Protein Homology CDS 3178907 3179194 . - 0 ID=cds-WJG92031.1;Parent=gene-PUW35_15500;Dbxref=NCBI_GP:WJG92031.1;Name=WJG92031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=PUW35_15500;product=DUF2623 family protein;protein_id=WJG92031.1;transl_table=11 CP118132.1 Genbank gene 3179279 3180922 . - . ID=gene-PUW35_15505;Name=PUW35_15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15505 CP118132.1 Protein Homology CDS 3179279 3180922 . - 0 ID=cds-WJG92032.1;Parent=gene-PUW35_15505;Dbxref=NCBI_GP:WJG92032.1;Name=WJG92032.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=PUW35_15505;product=methyl-accepting chemotaxis protein;protein_id=WJG92032.1;transl_table=11 CP118132.1 Genbank pseudogene 3181229 3181722 . - . ID=gene-PUW35_15510;Name=PUW35_15510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15510;pseudo=true CP118132.1 Protein Homology CDS 3181229 3181722 . - 0 ID=cds-PUW35_15510;Parent=gene-PUW35_15510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=PUW35_15510;product=TIGR00645 family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3182002 3182525 . - . ID=gene-PUW35_15515;Name=PUW35_15515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15515;pseudo=true CP118132.1 Protein Homology CDS 3182002 3182525 . - 0 ID=cds-PUW35_15515;Parent=gene-PUW35_15515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462069.1;locus_tag=PUW35_15515;product=RNA helicase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3182617 3183027 . + . ID=gene-PUW35_15520;Name=PUW35_15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15520 CP118132.1 Protein Homology CDS 3182617 3183027 . + 0 ID=cds-WJG92033.1;Parent=gene-PUW35_15520;Dbxref=NCBI_GP:WJG92033.1;Name=WJG92033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=PUW35_15520;product=hypothetical protein;protein_id=WJG92033.1;transl_table=11 CP118132.1 Genbank gene 3183014 3183418 . + . ID=gene-PUW35_15525;Name=PUW35_15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15525 CP118132.1 Protein Homology CDS 3183014 3183418 . + 0 ID=cds-WJG92034.1;Parent=gene-PUW35_15525;Dbxref=NCBI_GP:WJG92034.1;Name=WJG92034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=PUW35_15525;product=cytoplasmic protein;protein_id=WJG92034.1;transl_table=11 CP118132.1 Genbank gene 3183542 3184426 . + . ID=gene-PUW35_15530;Name=PUW35_15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15530 CP118132.1 Protein Homology CDS 3183542 3184426 . + 0 ID=cds-WJG92035.1;Parent=gene-PUW35_15530;Dbxref=NCBI_GP:WJG92035.1;Name=WJG92035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=PUW35_15530;product=SDR family oxidoreductase;protein_id=WJG92035.1;transl_table=11 CP118132.1 Genbank pseudogene 3184539 3184963 . - . ID=gene-PUW35_15535;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=pseudogene;locus_tag=PUW35_15535;pseudo=true CP118132.1 Protein Homology CDS 3184539 3184963 . - 0 ID=cds-PUW35_15535;Parent=gene-PUW35_15535;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=PUW35_15535;product=TonB system transport protein ExbD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3184970 3185704 . - . ID=gene-PUW35_15540;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=PUW35_15540 CP118132.1 Protein Homology CDS 3184970 3185704 . - 0 ID=cds-WJG92036.1;Parent=gene-PUW35_15540;Dbxref=NCBI_GP:WJG92036.1;Name=WJG92036.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=PUW35_15540;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WJG92036.1;transl_table=11 CP118132.1 Genbank gene 3185956 3187143 . + . ID=gene-PUW35_15545;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=PUW35_15545 CP118132.1 Protein Homology CDS 3185956 3187143 . + 0 ID=cds-WJG92037.1;Parent=gene-PUW35_15545;Dbxref=NCBI_GP:WJG92037.1;Name=WJG92037.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=PUW35_15545;product=cystathionine beta-lyase;protein_id=WJG92037.1;transl_table=11 CP118132.1 Genbank gene 3187283 3187942 . + . ID=gene-PUW35_15550;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=PUW35_15550 CP118132.1 Protein Homology CDS 3187283 3187942 . + 0 ID=cds-WJG92038.1;Parent=gene-PUW35_15550;Dbxref=NCBI_GP:WJG92038.1;Name=WJG92038.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=PUW35_15550;product=DedA family general envelope maintenance protein YghB;protein_id=WJG92038.1;transl_table=11 CP118132.1 Genbank gene 3188006 3188905 . - . ID=gene-PUW35_15555;Name=PUW35_15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15555 CP118132.1 Protein Homology CDS 3188006 3188905 . - 0 ID=cds-WJG95122.1;Parent=gene-PUW35_15555;Dbxref=NCBI_GP:WJG95122.1;Name=WJG95122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=PUW35_15555;product=AraC family transcriptional regulator;protein_id=WJG95122.1;transl_table=11 CP118132.1 Genbank gene 3189098 3190261 . + . ID=gene-PUW35_15560;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=PUW35_15560 CP118132.1 Protein Homology CDS 3189098 3190261 . + 0 ID=cds-WJG92039.1;Parent=gene-PUW35_15560;Dbxref=NCBI_GP:WJG92039.1;Name=WJG92039.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=PUW35_15560;product=alcohol dehydrogenase;protein_id=WJG92039.1;transl_table=11 CP118132.1 Genbank pseudogene 3190367 3191193 . + . ID=gene-PUW35_15565;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=pseudogene;locus_tag=PUW35_15565;pseudo=true CP118132.1 Protein Homology CDS 3190367 3191193 . + 0 ID=cds-PUW35_15565;Parent=gene-PUW35_15565;Note=frameshifted;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=PUW35_15565;product=2%2C5-didehydrogluconate reductase DkgA;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3191349 3192834 . + . ID=gene-PUW35_15570;Name=PUW35_15570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15570;pseudo=true CP118132.1 Protein Homology CDS 3191349 3192834 . + 0 ID=cds-PUW35_15570;Parent=gene-PUW35_15570;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=PUW35_15570;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3192879 3193334 . + . ID=gene-PUW35_15575;Name=PUW35_15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15575 CP118132.1 Protein Homology CDS 3192879 3193334 . + 0 ID=cds-WJG92040.1;Parent=gene-PUW35_15575;Dbxref=NCBI_GP:WJG92040.1;Name=WJG92040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=PUW35_15575;product=HIT family protein;protein_id=WJG92040.1;transl_table=11 CP118132.1 Genbank gene 3193492 3193686 . - . ID=gene-PUW35_15580;Name=PUW35_15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15580 CP118132.1 GeneMarkS-2+ CDS 3193492 3193686 . - 0 ID=cds-WJG92041.1;Parent=gene-PUW35_15580;Dbxref=NCBI_GP:WJG92041.1;Name=WJG92041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_15580;product=hypothetical protein;protein_id=WJG92041.1;transl_table=11 CP118132.1 Genbank pseudogene 3193889 3196059 . - . ID=gene-PUW35_15585;Name=PUW35_15585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15585;pseudo=true CP118132.1 Protein Homology CDS 3193889 3196059 . - 0 ID=cds-PUW35_15585;Parent=gene-PUW35_15585;Note=frameshifted;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=PUW35_15585;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3196546 3197529 . + . ID=gene-PUW35_15590;Name=PUW35_15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15590 CP118132.1 Protein Homology CDS 3196546 3197529 . + 0 ID=cds-WJG92042.1;Parent=gene-PUW35_15590;Dbxref=NCBI_GP:WJG92042.1;Name=WJG92042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=PUW35_15590;product=TRAP transporter substrate-binding protein;protein_id=WJG92042.1;transl_table=11 CP118132.1 Genbank gene 3197571 3198053 . + . ID=gene-PUW35_15595;Name=PUW35_15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15595 CP118132.1 Protein Homology CDS 3197571 3198053 . + 0 ID=cds-WJG92043.1;Parent=gene-PUW35_15595;Dbxref=NCBI_GP:WJG92043.1;Name=WJG92043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=PUW35_15595;product=TRAP transporter small permease;protein_id=WJG92043.1;transl_table=11 CP118132.1 Genbank pseudogene 3198064 3199370 . + . ID=gene-PUW35_15600;Name=PUW35_15600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15600;pseudo=true CP118132.1 Protein Homology CDS 3198064 3199370 . + 0 ID=cds-PUW35_15600;Parent=gene-PUW35_15600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=PUW35_15600;product=TRAP transporter large permease subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3199414 3200826 . - . ID=gene-PUW35_15605;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=PUW35_15605 CP118132.1 Protein Homology CDS 3199414 3200826 . - 0 ID=cds-WJG92044.1;Parent=gene-PUW35_15605;Dbxref=NCBI_GP:WJG92044.1;Name=WJG92044.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=PUW35_15605;product=cell division protein FtsP;protein_id=WJG92044.1;transl_table=11 CP118132.1 Genbank gene 3200900 3201637 . - . ID=gene-PUW35_15610;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=PUW35_15610 CP118132.1 Protein Homology CDS 3200900 3201637 . - 0 ID=cds-WJG92045.1;Parent=gene-PUW35_15610;Dbxref=NCBI_GP:WJG92045.1;Name=WJG92045.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=PUW35_15610;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WJG92045.1;transl_table=11 CP118132.1 Genbank gene 3201893 3204151 . - . ID=gene-PUW35_15615;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=PUW35_15615 CP118132.1 Protein Homology CDS 3201893 3204151 . - 0 ID=cds-WJG92046.1;Parent=gene-PUW35_15615;Dbxref=NCBI_GP:WJG92046.1;Name=WJG92046.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=PUW35_15615;product=DNA topoisomerase IV subunit A;protein_id=WJG92046.1;transl_table=11 CP118132.1 Genbank pseudogene 3204262 3205128 . - . ID=gene-PUW35_15620;Name=PUW35_15620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15620;pseudo=true CP118132.1 Protein Homology CDS 3204262 3205128 . - 0 ID=cds-PUW35_15620;Parent=gene-PUW35_15620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=PUW35_15620;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3205200 3205592 . - . ID=gene-PUW35_15625;Name=PUW35_15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15625 CP118132.1 Protein Homology CDS 3205200 3205592 . - 0 ID=cds-WJG92047.1;Parent=gene-PUW35_15625;Dbxref=NCBI_GP:WJG92047.1;Name=WJG92047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=PUW35_15625;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WJG92047.1;transl_table=11 CP118132.1 Genbank gene 3205744 3206403 . + . ID=gene-PUW35_15630;Name=PUW35_15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15630 CP118132.1 Protein Homology CDS 3205744 3206403 . + 0 ID=cds-WJG92048.1;Parent=gene-PUW35_15630;Dbxref=NCBI_GP:WJG92048.1;Name=WJG92048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=PUW35_15630;product=two-component system response regulator QseB;protein_id=WJG92048.1;transl_table=11 CP118132.1 Genbank gene 3206400 3207749 . + . ID=gene-PUW35_15635;Name=PUW35_15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15635 CP118132.1 Protein Homology CDS 3206400 3207749 . + 0 ID=cds-WJG92049.1;Parent=gene-PUW35_15635;Dbxref=NCBI_GP:WJG92049.1;Name=WJG92049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=PUW35_15635;product=two-component system sensor histidine kinase QseC;protein_id=WJG92049.1;transl_table=11 CP118132.1 Genbank gene 3207856 3208437 . + . ID=gene-PUW35_15640;Name=PUW35_15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15640 CP118132.1 Protein Homology CDS 3207856 3208437 . + 0 ID=cds-WJG92050.1;Parent=gene-PUW35_15640;Dbxref=NCBI_GP:WJG92050.1;Name=WJG92050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=PUW35_15640;product=NAD(P)H-dependent oxidoreductase;protein_id=WJG92050.1;transl_table=11 CP118132.1 Genbank gene 3208469 3208783 . + . ID=gene-PUW35_15645;Name=PUW35_15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15645 CP118132.1 Protein Homology CDS 3208469 3208783 . + 0 ID=cds-WJG92051.1;Parent=gene-PUW35_15645;Dbxref=NCBI_GP:WJG92051.1;Name=WJG92051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=PUW35_15645;product=putative quinol monooxygenase;protein_id=WJG92051.1;transl_table=11 CP118132.1 Genbank gene 3208908 3210800 . - . ID=gene-PUW35_15650;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=PUW35_15650 CP118132.1 Protein Homology CDS 3208908 3210800 . - 0 ID=cds-WJG92052.1;Parent=gene-PUW35_15650;Dbxref=NCBI_GP:WJG92052.1;Name=WJG92052.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=PUW35_15650;product=DNA topoisomerase IV subunit B;protein_id=WJG92052.1;transl_table=11 CP118132.1 Genbank gene 3210828 3211409 . - . ID=gene-PUW35_15655;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=PUW35_15655 CP118132.1 Protein Homology CDS 3210828 3211409 . - 0 ID=cds-WJG92053.1;Parent=gene-PUW35_15655;Dbxref=NCBI_GP:WJG92053.1;Name=WJG92053.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=PUW35_15655;product=esterase YqiA;protein_id=WJG92053.1;transl_table=11 CP118132.1 Genbank gene 3211409 3212236 . - . ID=gene-PUW35_15660;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=PUW35_15660 CP118132.1 Protein Homology CDS 3211409 3212236 . - 0 ID=cds-WJG92054.1;Parent=gene-PUW35_15660;Dbxref=NCBI_GP:WJG92054.1;Name=WJG92054.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=PUW35_15660;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WJG92054.1;transl_table=11 CP118132.1 Genbank gene 3212261 3212683 . - . ID=gene-PUW35_15665;Name=PUW35_15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15665 CP118132.1 Protein Homology CDS 3212261 3212683 . - 0 ID=cds-WJG92055.1;Parent=gene-PUW35_15665;Dbxref=NCBI_GP:WJG92055.1;Name=WJG92055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=PUW35_15665;product=DUF1249 family protein;protein_id=WJG92055.1;transl_table=11 CP118132.1 Genbank gene 3212680 3213312 . - . ID=gene-PUW35_15670;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=PUW35_15670 CP118132.1 Protein Homology CDS 3212680 3213312 . - 0 ID=cds-WJG92056.1;Parent=gene-PUW35_15670;Dbxref=NCBI_GP:WJG92056.1;Name=WJG92056.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=PUW35_15670;product=ADP-ribose diphosphatase;protein_id=WJG92056.1;transl_table=11 CP118132.1 Genbank gene 3213513 3214988 . + . ID=gene-PUW35_15675;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=PUW35_15675 CP118132.1 Protein Homology CDS 3213513 3214988 . + 0 ID=cds-WJG92057.1;Parent=gene-PUW35_15675;Dbxref=NCBI_GP:WJG92057.1;Name=WJG92057.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=PUW35_15675;product=outer membrane channel protein TolC;protein_id=WJG92057.1;transl_table=11 CP118132.1 Genbank gene 3215201 3215872 . + . ID=gene-PUW35_15680;Name=PUW35_15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15680 CP118132.1 Protein Homology CDS 3215201 3215872 . + 0 ID=cds-WJG92058.1;Parent=gene-PUW35_15680;Dbxref=NCBI_GP:WJG92058.1;Name=WJG92058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=PUW35_15680;product=DUF1190 family protein;protein_id=WJG92058.1;transl_table=11 CP118132.1 Genbank gene 3215878 3217041 . + . ID=gene-PUW35_15685;Name=PUW35_15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15685 CP118132.1 Protein Homology CDS 3215878 3217041 . + 0 ID=cds-WJG92059.1;Parent=gene-PUW35_15685;Dbxref=NCBI_GP:WJG92059.1;Name=WJG92059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=PUW35_15685;product=glutathionylspermidine synthase family protein;protein_id=WJG92059.1;transl_table=11 CP118132.1 Genbank gene 3217103 3217891 . - . ID=gene-PUW35_15690;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=PUW35_15690 CP118132.1 Protein Homology CDS 3217103 3217891 . - 0 ID=cds-WJG92060.1;Parent=gene-PUW35_15690;Dbxref=NCBI_GP:WJG92060.1;Name=WJG92060.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=PUW35_15690;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WJG92060.1;transl_table=11 CP118132.1 Genbank gene 3218032 3218805 . + . ID=gene-PUW35_15695;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=PUW35_15695 CP118132.1 Protein Homology CDS 3218032 3218805 . + 0 ID=cds-WJG92061.1;Parent=gene-PUW35_15695;Dbxref=NCBI_GP:WJG92061.1;Name=WJG92061.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=PUW35_15695;product=zinc transporter ZupT;protein_id=WJG92061.1;transl_table=11 CP118132.1 Genbank gene 3218872 3219048 . - . ID=gene-PUW35_15700;Name=PUW35_15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15700 CP118132.1 Protein Homology CDS 3218872 3219048 . - 0 ID=cds-WJG92062.1;Parent=gene-PUW35_15700;Dbxref=NCBI_GP:WJG92062.1;Name=WJG92062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=PUW35_15700;product=hypothetical protein;protein_id=WJG92062.1;transl_table=11 CP118132.1 Genbank gene 3219448 3221244 . + . ID=gene-PUW35_15705;Name=PUW35_15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15705 CP118132.1 Protein Homology CDS 3219448 3221244 . + 0 ID=cds-WJG92063.1;Parent=gene-PUW35_15705;Dbxref=NCBI_GP:WJG92063.1;Name=WJG92063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=PUW35_15705;product=aryl-sulfate sulfotransferase;protein_id=WJG92063.1;transl_table=11 CP118132.1 Genbank gene 3221264 3221935 . + . ID=gene-PUW35_15710;Name=PUW35_15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15710 CP118132.1 Protein Homology CDS 3221264 3221935 . + 0 ID=cds-WJG92064.1;Parent=gene-PUW35_15710;Dbxref=NCBI_GP:WJG92064.1;Name=WJG92064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=PUW35_15710;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WJG92064.1;transl_table=11 CP118132.1 Genbank gene 3221950 3222627 . + . ID=gene-PUW35_15715;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=PUW35_15715 CP118132.1 Protein Homology CDS 3221950 3222627 . + 0 ID=cds-WJG92065.1;Parent=gene-PUW35_15715;Dbxref=NCBI_GP:WJG92065.1;Name=WJG92065.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=PUW35_15715;product=protein-disulfide oxidoreductase DsbI;protein_id=WJG92065.1;transl_table=11 CP118132.1 Genbank gene 3222798 3223451 . - . ID=gene-PUW35_15720;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=PUW35_15720 CP118132.1 Protein Homology CDS 3222798 3223451 . - 0 ID=cds-WJG92066.1;Parent=gene-PUW35_15720;Dbxref=NCBI_GP:WJG92066.1;Name=WJG92066.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=PUW35_15720;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WJG92066.1;transl_table=11 CP118132.1 cmsearch riboswitch 3223557 3223753 . - . ID=id-CP118132.1:3223557..3223753;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118132.1 Genbank gene 3223886 3224182 . + . ID=gene-PUW35_15725;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;locus_tag=PUW35_15725 CP118132.1 Protein Homology CDS 3223886 3224182 . + 0 ID=cds-WJG92067.1;Parent=gene-PUW35_15725;Dbxref=NCBI_GP:WJG92067.1;Name=WJG92067.1;gbkey=CDS;gene=ubiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=PUW35_15725;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WJG92067.1;transl_table=11 CP118132.1 Genbank gene 3224257 3224466 . - . ID=gene-PUW35_15730;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=PUW35_15730 CP118132.1 Protein Homology CDS 3224257 3224466 . - 0 ID=cds-WJG92068.1;Parent=gene-PUW35_15730;Dbxref=NCBI_GP:WJG92068.1;Name=WJG92068.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=PUW35_15730;product=cell surface composition regulator GlgS;protein_id=WJG92068.1;transl_table=11 CP118132.1 Genbank gene 3224724 3225344 . + . ID=gene-PUW35_15735;Name=PUW35_15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15735 CP118132.1 Protein Homology CDS 3224724 3225344 . + 0 ID=cds-WJG92069.1;Parent=gene-PUW35_15735;Dbxref=NCBI_GP:WJG92069.1;Name=WJG92069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=PUW35_15735;product=DUF1449 family protein;protein_id=WJG92069.1;transl_table=11 CP118132.1 Genbank gene 3225363 3227042 . + . ID=gene-PUW35_15740;Name=PUW35_15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15740 CP118132.1 Protein Homology CDS 3225363 3227042 . + 0 ID=cds-WJG92070.1;Parent=gene-PUW35_15740;Dbxref=NCBI_GP:WJG92070.1;Name=WJG92070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=PUW35_15740;product=flotillin family protein;protein_id=WJG92070.1;transl_table=11 CP118132.1 Genbank gene 3227282 3227341 . + . ID=gene-PUW35_15745;Name=PUW35_15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15745 CP118132.1 Protein Homology CDS 3227282 3227341 . + 0 ID=cds-WJG95123.1;Parent=gene-PUW35_15745;Dbxref=NCBI_GP:WJG95123.1;Name=WJG95123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=PUW35_15745;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WJG95123.1;transl_table=11 CP118132.1 Genbank gene 3227501 3228934 . - . ID=gene-PUW35_15750;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=PUW35_15750 CP118132.1 Protein Homology CDS 3227501 3228934 . - 0 ID=cds-WJG92071.1;Parent=gene-PUW35_15750;Dbxref=NCBI_GP:WJG92071.1;Name=WJG92071.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=PUW35_15750;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WJG92071.1;transl_table=11 CP118132.1 Genbank pseudogene 3228982 3231823 . - . ID=gene-PUW35_15755;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=pseudogene;locus_tag=PUW35_15755;pseudo=true CP118132.1 Protein Homology CDS 3228982 3231823 . - 0 ID=cds-PUW35_15755;Parent=gene-PUW35_15755;Note=frameshifted;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=PUW35_15755;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3231941 3233242 . - . ID=gene-PUW35_15760;Name=PUW35_15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15760 CP118132.1 Protein Homology CDS 3231941 3233242 . - 0 ID=cds-WJG92072.1;Parent=gene-PUW35_15760;Dbxref=NCBI_GP:WJG92072.1;Name=WJG92072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=PUW35_15760;product=inorganic triphosphatase;protein_id=WJG92072.1;transl_table=11 CP118132.1 Genbank gene 3233484 3234098 . + . ID=gene-PUW35_15765;Name=PUW35_15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15765 CP118132.1 Protein Homology CDS 3233484 3234098 . + 0 ID=cds-WJG92073.1;Parent=gene-PUW35_15765;Dbxref=NCBI_GP:WJG92073.1;Name=WJG92073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=PUW35_15765;product=TIGR04211 family SH3 domain-containing protein;protein_id=WJG92073.1;transl_table=11 CP118132.1 Genbank gene 3234161 3235402 . + . ID=gene-PUW35_15770;Name=PUW35_15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15770 CP118132.1 Protein Homology CDS 3234161 3235402 . + 0 ID=cds-WJG92074.1;Parent=gene-PUW35_15770;Dbxref=NCBI_GP:WJG92074.1;Name=WJG92074.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=PUW35_15770;product=multifunctional CCA addition/repair protein;protein_id=WJG92074.1;transl_table=11 CP118132.1 Genbank gene 3235506 3236327 . - . ID=gene-PUW35_15775;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=PUW35_15775 CP118132.1 Protein Homology CDS 3235506 3236327 . - 0 ID=cds-WJG92075.1;Parent=gene-PUW35_15775;Dbxref=NCBI_GP:WJG92075.1;Name=WJG92075.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=PUW35_15775;product=undecaprenyl-diphosphate phosphatase;protein_id=WJG92075.1;transl_table=11 CP118132.1 Genbank gene 3236425 3236784 . - . ID=gene-PUW35_15780;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=PUW35_15780 CP118132.1 Protein Homology CDS 3236425 3236784 . - 0 ID=cds-WJG92076.1;Parent=gene-PUW35_15780;Dbxref=NCBI_GP:WJG92076.1;Name=WJG92076.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=PUW35_15780;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WJG92076.1;transl_table=11 CP118132.1 Genbank gene 3236891 3237502 . + . ID=gene-PUW35_15785;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=PUW35_15785 CP118132.1 Protein Homology CDS 3236891 3237502 . + 0 ID=cds-WJG92077.1;Parent=gene-PUW35_15785;Dbxref=NCBI_GP:WJG92077.1;Name=WJG92077.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=PUW35_15785;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WJG92077.1;transl_table=11 CP118132.1 Genbank pseudogene 3237501 3237629 . + . ID=gene-PUW35_15790;Name=PUW35_15790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15790;pseudo=true CP118132.1 Protein Homology CDS 3237501 3237629 . + 0 ID=cds-PUW35_15790;Parent=gene-PUW35_15790;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=PUW35_15790;product=fumarate hydratase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3237752 3238765 . - . ID=gene-PUW35_15795;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=PUW35_15795 CP118132.1 Protein Homology CDS 3237752 3238765 . - 0 ID=cds-WJG92078.1;Parent=gene-PUW35_15795;Dbxref=NCBI_GP:WJG92078.1;Name=WJG92078.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=PUW35_15795;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WJG92078.1;transl_table=11 CP118132.1 Genbank gene 3238993 3239208 . + . ID=gene-PUW35_15800;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=PUW35_15800 CP118132.1 Protein Homology CDS 3238993 3239208 . + 0 ID=cds-WJG92079.1;Parent=gene-PUW35_15800;Dbxref=NCBI_GP:WJG92079.1;Name=WJG92079.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=PUW35_15800;product=30S ribosomal protein S21;protein_id=WJG92079.1;transl_table=11 CP118132.1 Genbank gene 3239443 3241188 . + . ID=gene-PUW35_15805;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=PUW35_15805 CP118132.1 Protein Homology CDS 3239443 3241188 . + 0 ID=cds-WJG92080.1;Parent=gene-PUW35_15805;Dbxref=NCBI_GP:WJG92080.1;Name=WJG92080.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=PUW35_15805;product=DNA primase;protein_id=WJG92080.1;transl_table=11 CP118132.1 Genbank gene 3241203 3243185 . + . ID=gene-PUW35_15810;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=PUW35_15810 CP118132.1 Protein Homology CDS 3241203 3243185 . + 0 ID=cds-WJG92081.1;Parent=gene-PUW35_15810;Dbxref=NCBI_GP:WJG92081.1;Name=WJG92081.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=PUW35_15810;product=RNA polymerase sigma factor RpoD;protein_id=WJG92081.1;transl_table=11 CP118132.1 Genbank gene 3243309 3243815 . - . ID=gene-PUW35_15815;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=PUW35_15815 CP118132.1 Protein Homology CDS 3243309 3243815 . - 0 ID=cds-WJG92082.1;Parent=gene-PUW35_15815;Dbxref=NCBI_GP:WJG92082.1;Name=WJG92082.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=PUW35_15815;product=G/U mismatch-specific DNA glycosylase;protein_id=WJG92082.1;transl_table=11 CP118132.1 Genbank gene 3243941 3244016 . + . ID=gene-PUW35_15820;Name=PUW35_15820;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_15820 CP118132.1 tRNAscan-SE tRNA 3243941 3244016 . + . ID=rna-PUW35_15820;Parent=gene-PUW35_15820;anticodon=(pos:3243974..3243976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_15820;product=tRNA-Ile CP118132.1 tRNAscan-SE exon 3243941 3244016 . + . ID=exon-PUW35_15820-1;Parent=rna-PUW35_15820;anticodon=(pos:3243974..3243976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_15820;product=tRNA-Ile CP118132.1 Genbank gene 3244096 3244863 . - . ID=gene-PUW35_15825;Name=PUW35_15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15825 CP118132.1 Protein Homology CDS 3244096 3244863 . - 0 ID=cds-WJG92083.1;Parent=gene-PUW35_15825;Dbxref=NCBI_GP:WJG92083.1;Name=WJG92083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=PUW35_15825;product=siderophore-interacting protein;protein_id=WJG92083.1;transl_table=11 CP118132.1 Genbank pseudogene 3245095 3245741 . + . ID=gene-PUW35_15830;Name=PUW35_15830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15830;pseudo=true CP118132.1 Protein Homology CDS 3245095 3245741 . + 0 ID=cds-PUW35_15830;Parent=gene-PUW35_15830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=PUW35_15830;product=PadR family transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3245738 3247306 . - . ID=gene-PUW35_15835;Name=PUW35_15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15835 CP118132.1 Protein Homology CDS 3245738 3247306 . - 0 ID=cds-WJG92084.1;Parent=gene-PUW35_15835;Dbxref=NCBI_GP:WJG92084.1;Name=WJG92084.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=PUW35_15835;product=methyl-accepting chemotaxis protein;protein_id=WJG92084.1;transl_table=11 CP118132.1 Genbank gene 3247693 3249213 . - . ID=gene-PUW35_15840;Name=PUW35_15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15840 CP118132.1 Protein Homology CDS 3247693 3249213 . - 0 ID=cds-WJG92085.1;Parent=gene-PUW35_15840;Dbxref=NCBI_GP:WJG92085.1;Name=WJG92085.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=PUW35_15840;product=methyl-accepting chemotaxis protein;protein_id=WJG92085.1;transl_table=11 CP118132.1 Genbank gene 3249643 3251022 . + . ID=gene-PUW35_15845;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=PUW35_15845 CP118132.1 Protein Homology CDS 3249643 3251022 . + 0 ID=cds-WJG92086.1;Parent=gene-PUW35_15845;Dbxref=NCBI_GP:WJG92086.1;Name=WJG92086.1;Ontology_term=GO:0009447,GO:0033094;gbkey=CDS;gene=ygjG;go_function=butane-1%2C4-diamine:2-oxoglutarate aminotransferase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=PUW35_15845;product=putrescine aminotransferase;protein_id=WJG92086.1;transl_table=11 CP118132.1 Genbank gene 3251193 3253211 . + . ID=gene-PUW35_15850;Name=PUW35_15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15850 CP118132.1 Protein Homology CDS 3251193 3253211 . + 0 ID=cds-WJG92087.1;Parent=gene-PUW35_15850;Dbxref=NCBI_GP:WJG92087.1;Name=WJG92087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=PUW35_15850;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WJG92087.1;transl_table=11 CP118132.1 Genbank gene 3253292 3254428 . - . ID=gene-PUW35_15855;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=PUW35_15855 CP118132.1 Protein Homology CDS 3253292 3254428 . - 0 ID=cds-WJG92088.1;Parent=gene-PUW35_15855;Dbxref=NCBI_GP:WJG92088.1;Name=WJG92088.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=PUW35_15855;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WJG92088.1;transl_table=11 CP118132.1 Genbank gene 3254514 3255011 . + . ID=gene-PUW35_15860;Name=PUW35_15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15860 CP118132.1 Protein Homology CDS 3254514 3255011 . + 0 ID=cds-WJG92089.1;Parent=gene-PUW35_15860;Dbxref=NCBI_GP:WJG92089.1;Name=WJG92089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=PUW35_15860;product=M48 family metallopeptidase;protein_id=WJG92089.1;transl_table=11 CP118132.1 Genbank pseudogene 3255163 3255854 . + . ID=gene-PUW35_15865;Name=PUW35_15865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15865;pseudo=true CP118132.1 Protein Homology CDS 3255163 3255854 . + 0 ID=cds-PUW35_15865;Parent=gene-PUW35_15865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=PUW35_15865;product=vancomycin high temperature exclusion protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3255943 3256941 . + . ID=gene-PUW35_15870;Name=PUW35_15870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15870;pseudo=true CP118132.1 Protein Homology CDS 3255943 3256941 . + 0 ID=cds-PUW35_15870;Parent=gene-PUW35_15870;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=PUW35_15870;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3257211 3258179 . + . ID=gene-PUW35_15875;Name=PUW35_15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15875 CP118132.1 Protein Homology CDS 3257211 3258179 . + 0 ID=cds-WJG95124.1;Parent=gene-PUW35_15875;Dbxref=NCBI_GP:WJG95124.1;Name=WJG95124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=PUW35_15875;product=TerC family protein;protein_id=WJG95124.1;transl_table=11 CP118132.1 Genbank pseudogene 3258434 3259678 . + . ID=gene-PUW35_15880;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=pseudogene;locus_tag=PUW35_15880;pseudo=true CP118132.1 Protein Homology CDS 3258434 3259678 . + 0 ID=cds-PUW35_15880;Parent=gene-PUW35_15880;Note=internal stop;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=PUW35_15880;product=serine/threonine transporter SstT;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3260128 3260790 . + . ID=gene-PUW35_15885;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=PUW35_15885 CP118132.1 Protein Homology CDS 3260128 3260790 . + 0 ID=cds-WJG92090.1;Parent=gene-PUW35_15885;Dbxref=NCBI_GP:WJG92090.1;Name=WJG92090.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=PUW35_15885;product=DedA family general envelope maintenance protein YqjA;protein_id=WJG92090.1;transl_table=11 CP118132.1 Genbank gene 3260794 3261177 . + . ID=gene-PUW35_15890;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=PUW35_15890 CP118132.1 Protein Homology CDS 3260794 3261177 . + 0 ID=cds-WJG92091.1;Parent=gene-PUW35_15890;Dbxref=NCBI_GP:WJG92091.1;Name=WJG92091.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=PUW35_15890;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WJG92091.1;transl_table=11 CP118132.1 Genbank gene 3261322 3261690 . + . ID=gene-PUW35_15895;Name=PUW35_15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15895 CP118132.1 Protein Homology CDS 3261322 3261690 . + 0 ID=cds-WJG92092.1;Parent=gene-PUW35_15895;Dbxref=NCBI_GP:WJG92092.1;Name=WJG92092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=PUW35_15895;product=DUF1090 domain-containing protein;protein_id=WJG92092.1;transl_table=11 CP118132.1 Genbank gene 3261732 3262037 . + . ID=gene-PUW35_15900;Name=PUW35_15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15900 CP118132.1 Protein Homology CDS 3261732 3262037 . + 0 ID=cds-WJG92093.1;Parent=gene-PUW35_15900;Dbxref=NCBI_GP:WJG92093.1;Name=WJG92093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=PUW35_15900;product=YqjD family protein;protein_id=WJG92093.1;transl_table=11 CP118132.1 Genbank gene 3262040 3262438 . + . ID=gene-PUW35_15905;Name=PUW35_15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15905 CP118132.1 Protein Homology CDS 3262040 3262438 . + 0 ID=cds-WJG92094.1;Parent=gene-PUW35_15905;Dbxref=NCBI_GP:WJG92094.1;Name=WJG92094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=PUW35_15905;product=phage holin family protein;protein_id=WJG92094.1;transl_table=11 CP118132.1 Genbank gene 3262435 3262734 . + . ID=gene-PUW35_15910;Name=PUW35_15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15910 CP118132.1 Protein Homology CDS 3262435 3262734 . + 0 ID=cds-WJG92095.1;Parent=gene-PUW35_15910;Dbxref=NCBI_GP:WJG92095.1;Name=WJG92095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=PUW35_15910;product=YqjK-like family protein;protein_id=WJG92095.1;transl_table=11 CP118132.1 Genbank gene 3262981 3263373 . + . ID=gene-PUW35_15915;Name=PUW35_15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15915 CP118132.1 Protein Homology CDS 3262981 3263373 . + 0 ID=cds-WJG92096.1;Parent=gene-PUW35_15915;Dbxref=NCBI_GP:WJG92096.1;Name=WJG92096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=PUW35_15915;product=DoxX family protein;protein_id=WJG92096.1;transl_table=11 CP118132.1 Genbank gene 3263441 3264427 . + . ID=gene-PUW35_15920;Name=PUW35_15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15920 CP118132.1 Protein Homology CDS 3263441 3264427 . + 0 ID=cds-WJG92097.1;Parent=gene-PUW35_15920;Dbxref=NCBI_GP:WJG92097.1;Name=WJG92097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=PUW35_15920;product=glutathione S-transferase family protein;protein_id=WJG92097.1;transl_table=11 CP118132.1 Genbank gene 3264551 3264916 . + . ID=gene-PUW35_15925;Name=PUW35_15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15925 CP118132.1 Protein Homology CDS 3264551 3264916 . + 0 ID=cds-WJG92098.1;Parent=gene-PUW35_15925;Dbxref=NCBI_GP:WJG92098.1;Name=WJG92098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=PUW35_15925;product=DUF805 domain-containing protein;protein_id=WJG92098.1;transl_table=11 CP118132.1 Genbank pseudogene 3264955 3265850 . - . ID=gene-PUW35_15930;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=pseudogene;locus_tag=PUW35_15930;pseudo=true CP118132.1 Protein Homology CDS 3264955 3265850 . - 0 ID=cds-PUW35_15930;Parent=gene-PUW35_15930;Note=frameshifted;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=PUW35_15930;product=DNA-binding transcriptional regulator YhaJ;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3265955 3266656 . + . ID=gene-PUW35_15935;Name=PUW35_15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15935 CP118132.1 Protein Homology CDS 3265955 3266656 . + 0 ID=cds-WJG92099.1;Parent=gene-PUW35_15935;Dbxref=NCBI_GP:WJG92099.1;Name=WJG92099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=PUW35_15935;product=pirin family protein;protein_id=WJG92099.1;transl_table=11 CP118132.1 Genbank gene 3266680 3266844 . + . ID=gene-PUW35_15940;Name=PUW35_15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15940 CP118132.1 Protein Homology CDS 3266680 3266844 . + 0 ID=cds-WJG92100.1;Parent=gene-PUW35_15940;Dbxref=NCBI_GP:WJG92100.1;Name=WJG92100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=PUW35_15940;product=hypothetical protein;protein_id=WJG92100.1;transl_table=11 CP118132.1 Genbank gene 3266957 3268267 . - . ID=gene-PUW35_15945;Name=PUW35_15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_15945 CP118132.1 Protein Homology CDS 3266957 3268267 . - 0 ID=cds-WJG92101.1;Parent=gene-PUW35_15945;Dbxref=NCBI_GP:WJG92101.1;Name=WJG92101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=PUW35_15945;product=serine dehydratase subunit alpha family protein;protein_id=WJG92101.1;transl_table=11 CP118132.1 Genbank pseudogene 3268293 3269623 . - . ID=gene-PUW35_15950;Name=PUW35_15950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_15950;pseudo=true CP118132.1 Protein Homology CDS 3268293 3269623 . - 0 ID=cds-PUW35_15950;Parent=gene-PUW35_15950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=PUW35_15950;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3269938 3271301 . - . ID=gene-PUW35_15955;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=pseudogene;locus_tag=PUW35_15955;pseudo=true CP118132.1 Protein Homology CDS 3269938 3271301 . - 0 ID=cds-PUW35_15955;Parent=gene-PUW35_15955;Note=frameshifted;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=PUW35_15955;product=L-serine ammonia-lyase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3271371 3273665 . - . ID=gene-PUW35_15960;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=PUW35_15960 CP118132.1 Protein Homology CDS 3271371 3273665 . - 0 ID=cds-WJG92102.1;Parent=gene-PUW35_15960;Dbxref=NCBI_GP:WJG92102.1;Name=WJG92102.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=PUW35_15960;product=formate C-acetyltransferase;protein_id=WJG92102.1;transl_table=11 CP118132.1 Genbank gene 3273698 3274906 . - . ID=gene-PUW35_15965;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=PUW35_15965 CP118132.1 Protein Homology CDS 3273698 3274906 . - 0 ID=cds-WJG92103.1;Parent=gene-PUW35_15965;Dbxref=NCBI_GP:WJG92103.1;Name=WJG92103.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=PUW35_15965;product=propionate kinase;protein_id=WJG92103.1;transl_table=11 CP118132.1 Genbank gene 3274973 3276304 . - . ID=gene-PUW35_15970;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=PUW35_15970 CP118132.1 Protein Homology CDS 3274973 3276304 . - 0 ID=cds-WJG92104.1;Parent=gene-PUW35_15970;Dbxref=NCBI_GP:WJG92104.1;Name=WJG92104.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=PUW35_15970;product=threonine/serine transporter TdcC;protein_id=WJG92104.1;transl_table=11 CP118132.1 Genbank gene 3276325 3277314 . - . ID=gene-PUW35_15975;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=PUW35_15975 CP118132.1 Protein Homology CDS 3276325 3277314 . - 0 ID=cds-WJG92105.1;Parent=gene-PUW35_15975;Dbxref=NCBI_GP:WJG92105.1;Name=WJG92105.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=L-threonine ammonia-lyase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=PUW35_15975;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WJG92105.1;transl_table=11 CP118132.1 Genbank gene 3277412 3278350 . - . ID=gene-PUW35_15980;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=PUW35_15980 CP118132.1 Protein Homology CDS 3277412 3278350 . - 0 ID=cds-WJG92106.1;Parent=gene-PUW35_15980;Dbxref=NCBI_GP:WJG92106.1;Name=WJG92106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=PUW35_15980;product=transcriptional regulator TdcA;protein_id=WJG92106.1;transl_table=11 CP118132.1 Genbank gene 3279062 3279436 . - . ID=gene-PUW35_15985;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=PUW35_15985 CP118132.1 cmsearch RNase_P_RNA 3279062 3279436 . - . ID=rna-PUW35_15985;Parent=gene-PUW35_15985;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_15985;product=RNase P RNA component class A CP118132.1 cmsearch exon 3279062 3279436 . - . ID=exon-PUW35_15985-1;Parent=rna-PUW35_15985;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_15985;product=RNase P RNA component class A CP118132.1 Genbank gene 3279469 3280614 . - . ID=gene-PUW35_15990;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=PUW35_15990 CP118132.1 Protein Homology CDS 3279469 3280614 . - 0 ID=cds-WJG92107.1;Parent=gene-PUW35_15990;Dbxref=NCBI_GP:WJG92107.1;Name=WJG92107.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=PUW35_15990;product=glycerate 2-kinase;protein_id=WJG92107.1;transl_table=11 CP118132.1 Genbank gene 3280712 3281602 . - . ID=gene-PUW35_15995;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=PUW35_15995 CP118132.1 Protein Homology CDS 3280712 3281602 . - 0 ID=cds-WJG92108.1;Parent=gene-PUW35_15995;Dbxref=NCBI_GP:WJG92108.1;Name=WJG92108.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=PUW35_15995;product=2-hydroxy-3-oxopropionate reductase;protein_id=WJG92108.1;transl_table=11 CP118132.1 Genbank gene 3281628 3282398 . - . ID=gene-PUW35_16000;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=PUW35_16000 CP118132.1 Protein Homology CDS 3281628 3282398 . - 0 ID=cds-WJG92109.1;Parent=gene-PUW35_16000;Dbxref=NCBI_GP:WJG92109.1;Name=WJG92109.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=PUW35_16000;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WJG92109.1;transl_table=11 CP118132.1 Genbank gene 3282928 3284499 . + . ID=gene-PUW35_16005;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=PUW35_16005 CP118132.1 Protein Homology CDS 3282928 3284499 . + 0 ID=cds-WJG92110.1;Parent=gene-PUW35_16005;Dbxref=NCBI_GP:WJG92110.1;Name=WJG92110.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=PUW35_16005;product=galactarate dehydratase;protein_id=WJG92110.1;transl_table=11 CP118132.1 Genbank gene 3284757 3285611 . + . ID=gene-PUW35_16010;Name=PUW35_16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16010 CP118132.1 Protein Homology CDS 3284757 3285611 . + 0 ID=cds-WJG92111.1;Parent=gene-PUW35_16010;Dbxref=NCBI_GP:WJG92111.1;Name=WJG92111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=PUW35_16010;product=tagatose bisphosphate family class II aldolase;protein_id=WJG92111.1;transl_table=11 CP118132.1 Genbank gene 3285731 3287002 . + . ID=gene-PUW35_16015;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=PUW35_16015 CP118132.1 Protein Homology CDS 3285731 3287002 . + 0 ID=cds-WJG92112.1;Parent=gene-PUW35_16015;Dbxref=NCBI_GP:WJG92112.1;Name=WJG92112.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=PUW35_16015;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WJG92112.1;transl_table=11 CP118132.1 Genbank gene 3287017 3287481 . + . ID=gene-PUW35_16020;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=PUW35_16020 CP118132.1 Protein Homology CDS 3287017 3287481 . + 0 ID=cds-WJG92113.1;Parent=gene-PUW35_16020;Dbxref=NCBI_GP:WJG92113.1;Name=WJG92113.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=PUW35_16020;product=PTS galactitol transporter subunit IIA;protein_id=WJG92113.1;transl_table=11 CP118132.1 Genbank gene 3287512 3287796 . + . ID=gene-PUW35_16025;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=PUW35_16025 CP118132.1 Protein Homology CDS 3287512 3287796 . + 0 ID=cds-WJG92114.1;Parent=gene-PUW35_16025;Dbxref=NCBI_GP:WJG92114.1;Name=WJG92114.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=PUW35_16025;product=PTS galactitol transporter subunit IIB;protein_id=WJG92114.1;transl_table=11 CP118132.1 Genbank gene 3287800 3289173 . + . ID=gene-PUW35_16030;Name=PUW35_16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16030 CP118132.1 Protein Homology CDS 3287800 3289173 . + 0 ID=cds-WJG92115.1;Parent=gene-PUW35_16030;Dbxref=NCBI_GP:WJG92115.1;Name=WJG92115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=PUW35_16030;product=PTS galactitol transporter subunit IIC;protein_id=WJG92115.1;transl_table=11 CP118132.1 Genbank gene 3289217 3290260 . + . ID=gene-PUW35_16035;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=PUW35_16035 CP118132.1 Protein Homology CDS 3289217 3290260 . + 0 ID=cds-WJG92116.1;Parent=gene-PUW35_16035;Dbxref=NCBI_GP:WJG92116.1;Name=WJG92116.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=PUW35_16035;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WJG92116.1;transl_table=11 CP118132.1 Genbank gene 3290371 3291144 . + . ID=gene-PUW35_16040;Name=PUW35_16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16040 CP118132.1 Protein Homology CDS 3290371 3291144 . + 0 ID=cds-WJG92117.1;Parent=gene-PUW35_16040;Dbxref=NCBI_GP:WJG92117.1;Name=WJG92117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=PUW35_16040;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG92117.1;transl_table=11 CP118132.1 Genbank gene 3291302 3292165 . - . ID=gene-PUW35_16045;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=PUW35_16045 CP118132.1 Protein Homology CDS 3291302 3292165 . - 0 ID=cds-WJG92118.1;Parent=gene-PUW35_16045;Dbxref=NCBI_GP:WJG92118.1;Name=WJG92118.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=PUW35_16045;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WJG92118.1;transl_table=11 CP118132.1 Genbank gene 3292229 3294271 . + . ID=gene-PUW35_16050;Name=PUW35_16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16050 CP118132.1 Protein Homology CDS 3292229 3294271 . + 0 ID=cds-WJG92119.1;Parent=gene-PUW35_16050;Dbxref=NCBI_GP:WJG92119.1;Name=WJG92119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=PUW35_16050;product=penicillin-binding protein activator;protein_id=WJG92119.1;transl_table=11 CP118132.1 Genbank gene 3294229 3294624 . + . ID=gene-PUW35_16055;Name=PUW35_16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16055 CP118132.1 Protein Homology CDS 3294229 3294624 . + 0 ID=cds-WJG92120.1;Parent=gene-PUW35_16055;Dbxref=NCBI_GP:WJG92120.1;Name=WJG92120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=PUW35_16055;product=YraN family protein;protein_id=WJG92120.1;transl_table=11 CP118132.1 Genbank gene 3294646 3295236 . + . ID=gene-PUW35_16060;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=PUW35_16060 CP118132.1 Protein Homology CDS 3294646 3295236 . + 0 ID=cds-WJG92121.1;Parent=gene-PUW35_16060;Dbxref=NCBI_GP:WJG92121.1;Name=WJG92121.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=PUW35_16060;product=DnaA initiator-associating protein DiaA;protein_id=WJG92121.1;transl_table=11 CP118132.1 Genbank gene 3295246 3295821 . + . ID=gene-PUW35_16065;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=PUW35_16065 CP118132.1 Protein Homology CDS 3295246 3295821 . + 0 ID=cds-WJG92122.1;Parent=gene-PUW35_16065;Dbxref=NCBI_GP:WJG92122.1;Name=WJG92122.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=PUW35_16065;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WJG92122.1;transl_table=11 CP118132.1 Genbank gene 3295888 3296523 . - . ID=gene-PUW35_16070;Name=PUW35_16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16070 CP118132.1 Protein Homology CDS 3295888 3296523 . - 0 ID=cds-WJG92123.1;Parent=gene-PUW35_16070;Dbxref=NCBI_GP:WJG92123.1;Name=WJG92123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=PUW35_16070;product=NAD(P)H-binding protein;protein_id=WJG92123.1;transl_table=11 CP118132.1 Genbank gene 3296654 3297172 . + . ID=gene-PUW35_16075;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=PUW35_16075 CP118132.1 Protein Homology CDS 3296654 3297172 . + 0 ID=cds-WJG92124.1;Parent=gene-PUW35_16075;Dbxref=NCBI_GP:WJG92124.1;Name=WJG92124.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=PUW35_16075;product=protein/nucleic acid deglycase;protein_id=WJG92124.1;transl_table=11 CP118132.1 Genbank gene 3297152 3297595 . - . ID=gene-PUW35_16080;Name=PUW35_16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16080 CP118132.1 Protein Homology CDS 3297152 3297595 . - 0 ID=cds-WJG92125.1;Parent=gene-PUW35_16080;Dbxref=NCBI_GP:WJG92125.1;Name=WJG92125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=PUW35_16080;product=YhbP family protein;protein_id=WJG92125.1;transl_table=11 CP118132.1 Genbank gene 3297633 3297950 . + . ID=gene-PUW35_16085;Name=PUW35_16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16085 CP118132.1 Protein Homology CDS 3297633 3297950 . + 0 ID=cds-WJG92126.1;Parent=gene-PUW35_16085;Dbxref=NCBI_GP:WJG92126.1;Name=WJG92126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=PUW35_16085;product=GIY-YIG nuclease family protein;protein_id=WJG92126.1;transl_table=11 CP118132.1 Genbank gene 3297937 3298440 . - . ID=gene-PUW35_16090;Name=PUW35_16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16090 CP118132.1 Protein Homology CDS 3297937 3298440 . - 0 ID=cds-WJG92127.1;Parent=gene-PUW35_16090;Dbxref=NCBI_GP:WJG92127.1;Name=WJG92127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=PUW35_16090;product=N-acetyltransferase;protein_id=WJG92127.1;transl_table=11 CP118132.1 Genbank gene 3298434 3298958 . - . ID=gene-PUW35_16095;Name=PUW35_16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16095 CP118132.1 Protein Homology CDS 3298434 3298958 . - 0 ID=cds-WJG92128.1;Parent=gene-PUW35_16095;Dbxref=NCBI_GP:WJG92128.1;Name=WJG92128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=PUW35_16095;product=SCP2 domain-containing protein;protein_id=WJG92128.1;transl_table=11 CP118132.1 Genbank gene 3299175 3300170 . + . ID=gene-PUW35_16100;Name=PUW35_16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16100 CP118132.1 Protein Homology CDS 3299175 3300170 . + 0 ID=cds-WJG92129.1;Parent=gene-PUW35_16100;Dbxref=NCBI_GP:WJG92129.1;Name=WJG92129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=PUW35_16100;product=U32 family peptidase;protein_id=WJG92129.1;transl_table=11 CP118132.1 Genbank gene 3300161 3301057 . + . ID=gene-PUW35_16105;Name=PUW35_16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16105 CP118132.1 Protein Homology CDS 3300161 3301057 . + 0 ID=cds-WJG92130.1;Parent=gene-PUW35_16105;Dbxref=NCBI_GP:WJG92130.1;Name=WJG92130.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462188.3;locus_tag=PUW35_16105;product=U32 family peptidase;protein_id=WJG92130.1;transl_table=11 CP118132.1 Genbank gene 3301235 3302242 . + . ID=gene-PUW35_16110;Name=PUW35_16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16110 CP118132.1 Protein Homology CDS 3301235 3302242 . + 0 ID=cds-WJG92131.1;Parent=gene-PUW35_16110;Dbxref=NCBI_GP:WJG92131.1;Name=WJG92131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=PUW35_16110;product=LLM class flavin-dependent oxidoreductase;protein_id=WJG92131.1;transl_table=11 CP118132.1 Genbank gene 3302220 3302939 . - . ID=gene-PUW35_16115;Name=PUW35_16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16115 CP118132.1 Protein Homology CDS 3302220 3302939 . - 0 ID=cds-WJG92132.1;Parent=gene-PUW35_16115;Dbxref=NCBI_GP:WJG92132.1;Name=WJG92132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=PUW35_16115;product=murein L%2CD-transpeptidase;protein_id=WJG92132.1;transl_table=11 CP118132.1 Genbank gene 3303098 3303628 . + . ID=gene-PUW35_16120;Name=PUW35_16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16120 CP118132.1 Protein Homology CDS 3303098 3303628 . + 0 ID=cds-WJG92133.1;Parent=gene-PUW35_16120;Dbxref=NCBI_GP:WJG92133.1;Name=WJG92133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=PUW35_16120;product=cytoplasmic protein;protein_id=WJG92133.1;transl_table=11 CP118132.1 Genbank gene 3303689 3304933 . - . ID=gene-PUW35_16125;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=PUW35_16125 CP118132.1 Protein Homology CDS 3303689 3304933 . - 0 ID=cds-WJG92134.1;Parent=gene-PUW35_16125;Dbxref=NCBI_GP:WJG92134.1;Name=WJG92134.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=PUW35_16125;product=tryptophan permease;protein_id=WJG92134.1;transl_table=11 CP118132.1 Genbank gene 3305087 3306943 . - . ID=gene-PUW35_16130;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=PUW35_16130 CP118132.1 Protein Homology CDS 3305087 3306943 . - 0 ID=cds-WJG92135.1;Parent=gene-PUW35_16130;Dbxref=NCBI_GP:WJG92135.1;Name=WJG92135.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=PUW35_16130;product=ATP-dependent RNA helicase DeaD;protein_id=WJG92135.1;transl_table=11 CP118132.1 Genbank gene 3306936 3307016 . - . ID=gene-PUW35_16135;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=PUW35_16135 CP118132.1 Protein Homology CDS 3306936 3307016 . - 0 ID=cds-WJG95125.1;Parent=gene-PUW35_16135;Dbxref=NCBI_GP:WJG95125.1;Name=WJG95125.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=PUW35_16135;product=protein YrbN;protein_id=WJG95125.1;transl_table=11 CP118132.1 Genbank gene 3307122 3308006 . - . ID=gene-PUW35_16140;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=PUW35_16140 CP118132.1 Protein Homology CDS 3307122 3308006 . - 0 ID=cds-WJG92136.1;Parent=gene-PUW35_16140;Dbxref=NCBI_GP:WJG92136.1;Name=WJG92136.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=PUW35_16140;product=lipoprotein NlpI;protein_id=WJG92136.1;transl_table=11 CP118132.1 Genbank gene 3308116 3310251 . - . ID=gene-PUW35_16145;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=PUW35_16145 CP118132.1 Protein Homology CDS 3308116 3310251 . - 0 ID=cds-WJG95126.1;Parent=gene-PUW35_16145;Dbxref=NCBI_GP:WJG95126.1;Name=WJG95126.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=PUW35_16145;product=polyribonucleotide nucleotidyltransferase;protein_id=WJG95126.1;transl_table=11 CP118132.1 Genbank gene 3310493 3310762 . - . ID=gene-PUW35_16150;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=PUW35_16150 CP118132.1 Protein Homology CDS 3310493 3310762 . - 0 ID=cds-WJG92137.1;Parent=gene-PUW35_16150;Dbxref=NCBI_GP:WJG92137.1;Name=WJG92137.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=PUW35_16150;product=30S ribosomal protein S15;protein_id=WJG92137.1;transl_table=11 CP118132.1 Genbank gene 3310913 3311857 . - . ID=gene-PUW35_16155;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=PUW35_16155 CP118132.1 Protein Homology CDS 3310913 3311857 . - 0 ID=cds-WJG92138.1;Parent=gene-PUW35_16155;Dbxref=NCBI_GP:WJG92138.1;Name=WJG92138.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=PUW35_16155;product=tRNA pseudouridine(55) synthase TruB;protein_id=WJG92138.1;transl_table=11 CP118132.1 Genbank gene 3311857 3312258 . - . ID=gene-PUW35_16160;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=PUW35_16160 CP118132.1 Protein Homology CDS 3311857 3312258 . - 0 ID=cds-WJG92139.1;Parent=gene-PUW35_16160;Dbxref=NCBI_GP:WJG92139.1;Name=WJG92139.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=PUW35_16160;product=30S ribosome-binding factor RbfA;protein_id=WJG92139.1;transl_table=11 CP118132.1 Genbank gene 3312479 3315157 . - . ID=gene-PUW35_16165;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=PUW35_16165 CP118132.1 Protein Homology CDS 3312479 3315157 . - 0 ID=cds-WJG92140.1;Parent=gene-PUW35_16165;Dbxref=NCBI_GP:WJG92140.1;Name=WJG92140.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=PUW35_16165;product=translation initiation factor IF-2;protein_id=WJG92140.1;transl_table=11 CP118132.1 Genbank pseudogene 3315182 3316682 . - . ID=gene-PUW35_16170;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=PUW35_16170;pseudo=true CP118132.1 Protein Homology CDS 3315182 3316682 . - 0 ID=cds-PUW35_16170;Parent=gene-PUW35_16170;Note=frameshifted;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=PUW35_16170;product=transcription termination factor NusA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3316710 3317162 . - . ID=gene-PUW35_16175;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=PUW35_16175 CP118132.1 Protein Homology CDS 3316710 3317162 . - 0 ID=cds-WJG92141.1;Parent=gene-PUW35_16175;Dbxref=NCBI_GP:WJG92141.1;Name=WJG92141.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=PUW35_16175;product=ribosome maturation factor RimP;protein_id=WJG92141.1;transl_table=11 CP118132.1 Genbank gene 3317370 3317446 . - . ID=gene-PUW35_16180;Name=PUW35_16180;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_16180 CP118132.1 tRNAscan-SE tRNA 3317370 3317446 . - . ID=rna-PUW35_16180;Parent=gene-PUW35_16180;anticodon=(pos:complement(3317410..3317412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16180;product=tRNA-Met CP118132.1 tRNAscan-SE exon 3317370 3317446 . - . ID=exon-PUW35_16180-1;Parent=rna-PUW35_16180;anticodon=(pos:complement(3317410..3317412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16180;product=tRNA-Met CP118132.1 Genbank gene 3317790 3319133 . + . ID=gene-PUW35_16185;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=PUW35_16185 CP118132.1 Protein Homology CDS 3317790 3319133 . + 0 ID=cds-WJG92142.1;Parent=gene-PUW35_16185;Dbxref=NCBI_GP:WJG92142.1;Name=WJG92142.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=PUW35_16185;product=argininosuccinate synthase;protein_id=WJG92142.1;transl_table=11 CP118132.1 Genbank gene 3319291 3319743 . + . ID=gene-PUW35_16190;Name=PUW35_16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16190 CP118132.1 GeneMarkS-2+ CDS 3319291 3319743 . + 0 ID=cds-WJG92143.1;Parent=gene-PUW35_16190;Dbxref=NCBI_GP:WJG92143.1;Name=WJG92143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_16190;product=hypothetical protein;protein_id=WJG92143.1;transl_table=11 CP118132.1 Genbank gene 3319700 3320251 . + . ID=gene-PUW35_16195;Name=PUW35_16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16195 CP118132.1 GeneMarkS-2+ CDS 3319700 3320251 . + 0 ID=cds-WJG92144.1;Parent=gene-PUW35_16195;Dbxref=NCBI_GP:WJG92144.1;Name=WJG92144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_16195;product=hypothetical protein;protein_id=WJG92144.1;transl_table=11 CP118132.1 Genbank gene 3320336 3320422 . - . ID=gene-PUW35_16200;Name=PUW35_16200;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_16200 CP118132.1 tRNAscan-SE tRNA 3320336 3320422 . - . ID=rna-PUW35_16200;Parent=gene-PUW35_16200;anticodon=(pos:complement(3320386..3320388));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16200;product=tRNA-Leu CP118132.1 tRNAscan-SE exon 3320336 3320422 . - . ID=exon-PUW35_16200-1;Parent=rna-PUW35_16200;anticodon=(pos:complement(3320386..3320388));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16200;product=tRNA-Leu CP118132.1 Genbank gene 3320436 3320768 . - . ID=gene-PUW35_16205;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=PUW35_16205 CP118132.1 Protein Homology CDS 3320436 3320768 . - 0 ID=cds-WJG92145.1;Parent=gene-PUW35_16205;Dbxref=NCBI_GP:WJG92145.1;Name=WJG92145.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=PUW35_16205;product=preprotein translocase subunit SecG;protein_id=WJG92145.1;transl_table=11 CP118132.1 Genbank gene 3320991 3322328 . - . ID=gene-PUW35_16210;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=PUW35_16210 CP118132.1 Protein Homology CDS 3320991 3322328 . - 0 ID=cds-WJG92146.1;Parent=gene-PUW35_16210;Dbxref=NCBI_GP:WJG92146.1;Name=WJG92146.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=PUW35_16210;product=phosphoglucosamine mutase;protein_id=WJG92146.1;transl_table=11 CP118132.1 Genbank gene 3322321 3323169 . - . ID=gene-PUW35_16215;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=PUW35_16215 CP118132.1 Protein Homology CDS 3322321 3323169 . - 0 ID=cds-WJG92147.1;Parent=gene-PUW35_16215;Dbxref=NCBI_GP:WJG92147.1;Name=WJG92147.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=PUW35_16215;product=dihydropteroate synthase;protein_id=WJG92147.1;transl_table=11 CP118132.1 Genbank gene 3323274 3325208 . - . ID=gene-PUW35_16220;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=PUW35_16220 CP118132.1 Protein Homology CDS 3323274 3325208 . - 0 ID=cds-WJG92148.1;Parent=gene-PUW35_16220;Dbxref=NCBI_GP:WJG92148.1;Name=WJG92148.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=PUW35_16220;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WJG92148.1;transl_table=11 CP118132.1 Genbank gene 3325312 3325938 . - . ID=gene-PUW35_16225;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=PUW35_16225 CP118132.1 Protein Homology CDS 3325312 3325938 . - 0 ID=cds-WJG92149.1;Parent=gene-PUW35_16225;Dbxref=NCBI_GP:WJG92149.1;Name=WJG92149.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=PUW35_16225;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WJG92149.1;transl_table=11 CP118132.1 Genbank gene 3326065 3326358 . + . ID=gene-PUW35_16230;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=PUW35_16230 CP118132.1 Protein Homology CDS 3326065 3326358 . + 0 ID=cds-WJG95127.1;Parent=gene-PUW35_16230;Dbxref=NCBI_GP:WJG95127.1;Name=WJG95127.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=PUW35_16230;product=ribosome assembly RNA-binding protein YhbY;protein_id=WJG95127.1;transl_table=11 CP118132.1 Genbank gene 3326514 3326990 . - . ID=gene-PUW35_16235;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=PUW35_16235 CP118132.1 Protein Homology CDS 3326514 3326990 . - 0 ID=cds-WJG92150.1;Parent=gene-PUW35_16235;Dbxref=NCBI_GP:WJG92150.1;Name=WJG92150.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=PUW35_16235;product=transcription elongation factor GreA;protein_id=WJG92150.1;transl_table=11 CP118132.1 Genbank gene 3327238 3328671 . + . ID=gene-PUW35_16240;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=PUW35_16240 CP118132.1 Protein Homology CDS 3327238 3328671 . + 0 ID=cds-WJG92151.1;Parent=gene-PUW35_16240;Dbxref=NCBI_GP:WJG92151.1;Name=WJG92151.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=PUW35_16240;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WJG92151.1;transl_table=11 CP118132.1 Genbank gene 3328802 3329974 . - . ID=gene-PUW35_16245;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=PUW35_16245 CP118132.1 Protein Homology CDS 3328802 3329974 . - 0 ID=cds-WJG92152.1;Parent=gene-PUW35_16245;Dbxref=NCBI_GP:WJG92152.1;Name=WJG92152.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=PUW35_16245;product=Obg family GTPase CgtA;protein_id=WJG92152.1;transl_table=11 CP118132.1 Genbank gene 3329990 3330955 . - . ID=gene-PUW35_16250;Name=PUW35_16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16250 CP118132.1 Protein Homology CDS 3329990 3330955 . - 0 ID=cds-WJG92153.1;Parent=gene-PUW35_16250;Dbxref=NCBI_GP:WJG92153.1;Name=WJG92153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=PUW35_16250;product=DMT family transporter;protein_id=WJG92153.1;transl_table=11 CP118132.1 Genbank gene 3331085 3331342 . - . ID=gene-PUW35_16255;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=PUW35_16255 CP118132.1 Protein Homology CDS 3331085 3331342 . - 0 ID=cds-WJG92154.1;Parent=gene-PUW35_16255;Dbxref=NCBI_GP:WJG92154.1;Name=WJG92154.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=PUW35_16255;product=50S ribosomal protein L27;protein_id=WJG92154.1;transl_table=11 CP118132.1 Genbank gene 3331362 3331673 . - . ID=gene-PUW35_16260;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=PUW35_16260 CP118132.1 Protein Homology CDS 3331362 3331673 . - 0 ID=cds-WJG92155.1;Parent=gene-PUW35_16260;Dbxref=NCBI_GP:WJG92155.1;Name=WJG92155.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=PUW35_16260;product=50S ribosomal protein L21;protein_id=WJG92155.1;transl_table=11 CP118132.1 Genbank gene 3331931 3332902 . + . ID=gene-PUW35_16265;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=PUW35_16265 CP118132.1 Protein Homology CDS 3331931 3332902 . + 0 ID=cds-WJG92156.1;Parent=gene-PUW35_16265;Dbxref=NCBI_GP:WJG92156.1;Name=WJG92156.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=PUW35_16265;product=octaprenyl diphosphate synthase;protein_id=WJG92156.1;transl_table=11 CP118132.1 Genbank gene 3333134 3333421 . + . ID=gene-PUW35_16270;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=PUW35_16270 CP118132.1 Protein Homology CDS 3333134 3333421 . + 0 ID=cds-WJG92157.1;Parent=gene-PUW35_16270;Dbxref=NCBI_GP:WJG92157.1;Name=WJG92157.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=PUW35_16270;product=DNA-binding transcriptional regulator SfsB;protein_id=WJG92157.1;transl_table=11 CP118132.1 Genbank pseudogene 3333480 3334738 . - . ID=gene-PUW35_16275;Name=murA;gbkey=Gene;gene=murA;gene_biotype=pseudogene;locus_tag=PUW35_16275;pseudo=true CP118132.1 Protein Homology CDS 3333480 3334738 . - 0 ID=cds-PUW35_16275;Parent=gene-PUW35_16275;Note=frameshifted;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=PUW35_16275;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3334792 3335046 . - . ID=gene-PUW35_16280;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=PUW35_16280 CP118132.1 Protein Homology CDS 3334792 3335046 . - 0 ID=cds-WJG92158.1;Parent=gene-PUW35_16280;Dbxref=NCBI_GP:WJG92158.1;Name=WJG92158.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=PUW35_16280;product=BolA family iron metabolism protein IbaG;protein_id=WJG92158.1;transl_table=11 CP118132.1 Genbank gene 3335234 3335530 . - . ID=gene-PUW35_16285;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=PUW35_16285 CP118132.1 Protein Homology CDS 3335234 3335530 . - 0 ID=cds-WJG92159.1;Parent=gene-PUW35_16285;Dbxref=NCBI_GP:WJG92159.1;Name=WJG92159.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=PUW35_16285;product=lipid asymmetry maintenance protein MlaB;protein_id=WJG92159.1;transl_table=11 CP118132.1 Genbank gene 3335530 3336165 . - . ID=gene-PUW35_16290;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=PUW35_16290 CP118132.1 Protein Homology CDS 3335530 3336165 . - 0 ID=cds-WJG92160.1;Parent=gene-PUW35_16290;Dbxref=NCBI_GP:WJG92160.1;Name=WJG92160.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=PUW35_16290;product=phospholipid-binding protein MlaC;protein_id=WJG92160.1;transl_table=11 CP118132.1 Genbank gene 3336158 3336733 . - . ID=gene-PUW35_16295;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=PUW35_16295 CP118132.1 Protein Homology CDS 3336158 3336733 . - 0 ID=cds-WJG92161.1;Parent=gene-PUW35_16295;Dbxref=NCBI_GP:WJG92161.1;Name=WJG92161.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=PUW35_16295;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WJG92161.1;transl_table=11 CP118132.1 Genbank gene 3336738 3337520 . - . ID=gene-PUW35_16300;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=PUW35_16300 CP118132.1 Protein Homology CDS 3336738 3337520 . - 0 ID=cds-WJG92162.1;Parent=gene-PUW35_16300;Dbxref=NCBI_GP:WJG92162.1;Name=WJG92162.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=PUW35_16300;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WJG92162.1;transl_table=11 CP118132.1 Genbank pseudogene 3337528 3338339 . - . ID=gene-PUW35_16305;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=pseudogene;locus_tag=PUW35_16305;pseudo=true CP118132.1 Protein Homology CDS 3337528 3338339 . - 0 ID=cds-PUW35_16305;Parent=gene-PUW35_16305;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=PUW35_16305;product=phospholipid ABC transporter ATP-binding protein MlaF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3338552 3339529 . + . ID=gene-PUW35_16310;Name=PUW35_16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16310 CP118132.1 Protein Homology CDS 3338552 3339529 . + 0 ID=cds-WJG92163.1;Parent=gene-PUW35_16310;Dbxref=NCBI_GP:WJG92163.1;Name=WJG92163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=PUW35_16310;product=calcium/sodium antiporter;protein_id=WJG92163.1;transl_table=11 CP118132.1 Genbank gene 3339543 3340529 . + . ID=gene-PUW35_16315;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=PUW35_16315 CP118132.1 Protein Homology CDS 3339543 3340529 . + 0 ID=cds-WJG92164.1;Parent=gene-PUW35_16315;Dbxref=NCBI_GP:WJG92164.1;Name=WJG92164.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=PUW35_16315;product=arabinose-5-phosphate isomerase KdsD;protein_id=WJG92164.1;transl_table=11 CP118132.1 Genbank gene 3340550 3341116 . + . ID=gene-PUW35_16320;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=PUW35_16320 CP118132.1 Protein Homology CDS 3340550 3341116 . + 0 ID=cds-WJG92165.1;Parent=gene-PUW35_16320;Dbxref=NCBI_GP:WJG92165.1;Name=WJG92165.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=PUW35_16320;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WJG92165.1;transl_table=11 CP118132.1 Genbank gene 3341113 3341688 . + . ID=gene-PUW35_16325;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=PUW35_16325 CP118132.1 Protein Homology CDS 3341113 3341688 . + 0 ID=cds-WJG92166.1;Parent=gene-PUW35_16325;Dbxref=NCBI_GP:WJG92166.1;Name=WJG92166.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=PUW35_16325;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WJG92166.1;transl_table=11 CP118132.1 Genbank gene 3341657 3342211 . + . ID=gene-PUW35_16330;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=PUW35_16330 CP118132.1 Protein Homology CDS 3341657 3342211 . + 0 ID=cds-WJG92167.1;Parent=gene-PUW35_16330;Dbxref=NCBI_GP:WJG92167.1;Name=WJG92167.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=PUW35_16330;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WJG92167.1;transl_table=11 CP118132.1 Genbank gene 3342218 3342943 . + . ID=gene-PUW35_16335;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=PUW35_16335 CP118132.1 Protein Homology CDS 3342218 3342943 . + 0 ID=cds-WJG92168.1;Parent=gene-PUW35_16335;Dbxref=NCBI_GP:WJG92168.1;Name=WJG92168.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=PUW35_16335;product=LPS export ABC transporter ATP-binding protein;protein_id=WJG92168.1;transl_table=11 CP118132.1 Genbank gene 3342991 3344424 . + . ID=gene-PUW35_16340;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=PUW35_16340 CP118132.1 Protein Homology CDS 3342991 3344424 . + 0 ID=cds-WJG92169.1;Parent=gene-PUW35_16340;Dbxref=NCBI_GP:WJG92169.1;Name=WJG92169.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=PUW35_16340;product=RNA polymerase factor sigma-54;protein_id=WJG92169.1;transl_table=11 CP118132.1 Genbank gene 3344447 3344734 . + . ID=gene-PUW35_16345;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=PUW35_16345 CP118132.1 Protein Homology CDS 3344447 3344734 . + 0 ID=cds-WJG92170.1;Parent=gene-PUW35_16345;Dbxref=NCBI_GP:WJG92170.1;Name=WJG92170.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=PUW35_16345;product=ribosome hibernation promoting factor;protein_id=WJG92170.1;transl_table=11 CP118132.1 Genbank gene 3344852 3345343 . + . ID=gene-PUW35_16350;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=PUW35_16350 CP118132.1 Protein Homology CDS 3344852 3345343 . + 0 ID=cds-WJG92171.1;Parent=gene-PUW35_16350;Dbxref=NCBI_GP:WJG92171.1;Name=WJG92171.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=PUW35_16350;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WJG92171.1;transl_table=11 CP118132.1 Genbank gene 3345389 3346243 . + . ID=gene-PUW35_16355;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=PUW35_16355 CP118132.1 Protein Homology CDS 3345389 3346243 . + 0 ID=cds-WJG92172.1;Parent=gene-PUW35_16355;Dbxref=NCBI_GP:WJG92172.1;Name=WJG92172.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=PUW35_16355;product=RNase adapter RapZ;protein_id=WJG92172.1;transl_table=11 CP118132.1 Genbank gene 3346240 3346512 . + . ID=gene-PUW35_16360;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=PUW35_16360 CP118132.1 Protein Homology CDS 3346240 3346512 . + 0 ID=cds-WJG92173.1;Parent=gene-PUW35_16360;Dbxref=NCBI_GP:WJG92173.1;Name=WJG92173.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=PUW35_16360;product=PTS phosphocarrier protein NPr;protein_id=WJG92173.1;transl_table=11 CP118132.1 Genbank gene 3346762 3347394 . + . ID=gene-PUW35_16365;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=PUW35_16365 CP118132.1 Protein Homology CDS 3346762 3347394 . + 0 ID=cds-WJG92174.1;Parent=gene-PUW35_16365;Dbxref=NCBI_GP:WJG92174.1;Name=WJG92174.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=PUW35_16365;product=PhoP regulatory network protein YrbL;protein_id=WJG92174.1;transl_table=11 CP118132.1 Genbank gene 3347469 3348197 . - . ID=gene-PUW35_16370;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=PUW35_16370 CP118132.1 Protein Homology CDS 3347469 3348197 . - 0 ID=cds-WJG92175.1;Parent=gene-PUW35_16370;Dbxref=NCBI_GP:WJG92175.1;Name=WJG92175.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=PUW35_16370;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WJG92175.1;transl_table=11 CP118132.1 Genbank gene 3348194 3348847 . - . ID=gene-PUW35_16375;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=PUW35_16375 CP118132.1 Protein Homology CDS 3348194 3348847 . - 0 ID=cds-WJG92176.1;Parent=gene-PUW35_16375;Dbxref=NCBI_GP:WJG92176.1;Name=WJG92176.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=PUW35_16375;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WJG92176.1;transl_table=11 CP118132.1 Genbank pseudogene 3349074 3351409 . - . ID=gene-PUW35_16380;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=pseudogene;locus_tag=PUW35_16380;pseudo=true CP118132.1 Protein Homology CDS 3349074 3351409 . - 0 ID=cds-PUW35_16380;Parent=gene-PUW35_16380;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=PUW35_16380;product=aerobic respiration two-component sensor histidine kinase ArcB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3351503 3352432 . - . ID=gene-PUW35_16385;Name=PUW35_16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16385 CP118132.1 Protein Homology CDS 3351503 3352432 . - 0 ID=cds-WJG92177.1;Parent=gene-PUW35_16385;Dbxref=NCBI_GP:WJG92177.1;Name=WJG92177.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=PUW35_16385;product=TIGR01212 family radical SAM protein;protein_id=WJG92177.1;transl_table=11 CP118132.1 Genbank pseudogene 3353103 3357562 . + . ID=gene-PUW35_16390;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=pseudogene;locus_tag=PUW35_16390;pseudo=true CP118132.1 Protein Homology CDS 3353103 3357562 . + 0 ID=cds-PUW35_16390;Parent=gene-PUW35_16390;Note=frameshifted;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=PUW35_16390;product=glutamate synthase large subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3357572 3358990 . + . ID=gene-PUW35_16395;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=PUW35_16395 CP118132.1 Protein Homology CDS 3357572 3358990 . + 0 ID=cds-WJG92178.1;Parent=gene-PUW35_16395;Dbxref=NCBI_GP:WJG92178.1;Name=WJG92178.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=PUW35_16395;product=glutamate synthase subunit GltD;protein_id=WJG92178.1;transl_table=11 CP118132.1 Genbank gene 3359197 3360300 . + . ID=gene-PUW35_16400;Name=PUW35_16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16400 CP118132.1 Protein Homology CDS 3359197 3360300 . + 0 ID=cds-WJG92179.1;Parent=gene-PUW35_16400;Dbxref=NCBI_GP:WJG92179.1;Name=WJG92179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=PUW35_16400;product=PDDEXK nuclease domain-containing protein;protein_id=WJG92179.1;transl_table=11 CP118132.1 Genbank gene 3360416 3361669 . + . ID=gene-PUW35_16405;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=PUW35_16405 CP118132.1 Protein Homology CDS 3360416 3361669 . + 0 ID=cds-WJG92180.1;Parent=gene-PUW35_16405;Dbxref=NCBI_GP:WJG92180.1;Name=WJG92180.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=PUW35_16405;product=cytosine permease;protein_id=WJG92180.1;transl_table=11 CP118132.1 Genbank gene 3361656 3362936 . + . ID=gene-PUW35_16410;Name=PUW35_16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16410 CP118132.1 Protein Homology CDS 3361656 3362936 . + 0 ID=cds-WJG92181.1;Parent=gene-PUW35_16410;Dbxref=NCBI_GP:WJG92181.1;Name=WJG92181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=PUW35_16410;product=cytosine deaminase;protein_id=WJG92181.1;transl_table=11 CP118132.1 Genbank gene 3363018 3363485 . - . ID=gene-PUW35_16415;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=PUW35_16415 CP118132.1 Protein Homology CDS 3363018 3363485 . - 0 ID=cds-WJG92182.1;Parent=gene-PUW35_16415;Dbxref=NCBI_GP:WJG92182.1;Name=WJG92182.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=cellular response to DNA damage stimulus|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=PUW35_16415;product=N-acetylneuraminate anomerase;protein_id=WJG92182.1;transl_table=11 CP118132.1 Genbank gene 3363482 3364357 . - . ID=gene-PUW35_16420;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=PUW35_16420 CP118132.1 Protein Homology CDS 3363482 3364357 . - 0 ID=cds-WJG92183.1;Parent=gene-PUW35_16420;Dbxref=NCBI_GP:WJG92183.1;Name=WJG92183.1;gbkey=CDS;gene=nanK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=PUW35_16420;product=N-acetylmannosamine kinase;protein_id=WJG92183.1;transl_table=11 CP118132.1 Genbank gene 3364354 3365043 . - . ID=gene-PUW35_16425;Name=PUW35_16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16425 CP118132.1 Protein Homology CDS 3364354 3365043 . - 0 ID=cds-WJG92184.1;Parent=gene-PUW35_16425;Dbxref=NCBI_GP:WJG92184.1;Name=WJG92184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=PUW35_16425;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WJG92184.1;transl_table=11 CP118132.1 Genbank gene 3365090 3366580 . - . ID=gene-PUW35_16430;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=PUW35_16430 CP118132.1 Protein Homology CDS 3365090 3366580 . - 0 ID=cds-WJG92185.1;Parent=gene-PUW35_16430;Dbxref=NCBI_GP:WJG92185.1;Name=WJG92185.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=PUW35_16430;product=sialic acid transporter NanT;protein_id=WJG92185.1;transl_table=11 CP118132.1 Genbank gene 3366696 3367589 . - . ID=gene-PUW35_16435;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=PUW35_16435 CP118132.1 Protein Homology CDS 3366696 3367589 . - 0 ID=cds-WJG92186.1;Parent=gene-PUW35_16435;Dbxref=NCBI_GP:WJG92186.1;Name=WJG92186.1;Ontology_term=GO:0006040,GO:0009273,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=PUW35_16435;product=N-acetylneuraminate lyase;protein_id=WJG92186.1;transl_table=11 CP118132.1 Genbank gene 3367724 3368515 . - . ID=gene-PUW35_16440;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=PUW35_16440 CP118132.1 Protein Homology CDS 3367724 3368515 . - 0 ID=cds-WJG92187.1;Parent=gene-PUW35_16440;Dbxref=NCBI_GP:WJG92187.1;Name=WJG92187.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=PUW35_16440;product=transcriptional regulator NanR;protein_id=WJG92187.1;transl_table=11 CP118132.1 Genbank gene 3368624 3369124 . - . ID=gene-PUW35_16445;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=PUW35_16445 CP118132.1 Protein Homology CDS 3368624 3369124 . - 0 ID=cds-WJG92188.1;Parent=gene-PUW35_16445;Dbxref=NCBI_GP:WJG92188.1;Name=WJG92188.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=PUW35_16445;product=ClpXP protease specificity-enhancing factor;protein_id=WJG92188.1;transl_table=11 CP118132.1 Genbank gene 3369130 3369768 . - . ID=gene-PUW35_16450;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=PUW35_16450 CP118132.1 Protein Homology CDS 3369130 3369768 . - 0 ID=cds-WJG92189.1;Parent=gene-PUW35_16450;Dbxref=NCBI_GP:WJG92189.1;Name=WJG92189.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=PUW35_16450;product=stringent starvation protein SspA;protein_id=WJG92189.1;transl_table=11 CP118132.1 Genbank gene 3370030 3370782 . - . ID=gene-PUW35_16455;Name=PUW35_16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16455 CP118132.1 Protein Homology CDS 3370030 3370782 . - 0 ID=cds-WJG95128.1;Parent=gene-PUW35_16455;Dbxref=NCBI_GP:WJG95128.1;Name=WJG95128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=PUW35_16455;product=DUF695 domain-containing protein;protein_id=WJG95128.1;transl_table=11 CP118132.1 Genbank gene 3370982 3371374 . - . ID=gene-PUW35_16460;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=PUW35_16460 CP118132.1 Protein Homology CDS 3370982 3371374 . - 0 ID=cds-WJG92190.1;Parent=gene-PUW35_16460;Dbxref=NCBI_GP:WJG92190.1;Name=WJG92190.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=PUW35_16460;product=30S ribosomal protein S9;protein_id=WJG92190.1;transl_table=11 CP118132.1 Genbank gene 3371390 3371818 . - . ID=gene-PUW35_16465;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=PUW35_16465 CP118132.1 Protein Homology CDS 3371390 3371818 . - 0 ID=cds-WJG92191.1;Parent=gene-PUW35_16465;Dbxref=NCBI_GP:WJG92191.1;Name=WJG92191.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=PUW35_16465;product=50S ribosomal protein L13;protein_id=WJG92191.1;transl_table=11 CP118132.1 Genbank gene 3372120 3373244 . - . ID=gene-PUW35_16470;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=PUW35_16470 CP118132.1 Protein Homology CDS 3372120 3373244 . - 0 ID=cds-WJG92192.1;Parent=gene-PUW35_16470;Dbxref=NCBI_GP:WJG92192.1;Name=WJG92192.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=PUW35_16470;product=cell division protein ZapE;protein_id=WJG92192.1;transl_table=11 CP118132.1 Genbank gene 3373437 3373835 . + . ID=gene-PUW35_16475;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=PUW35_16475 CP118132.1 Protein Homology CDS 3373437 3373835 . + 0 ID=cds-WJG92193.1;Parent=gene-PUW35_16475;Dbxref=NCBI_GP:WJG92193.1;Name=WJG92193.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=PUW35_16475;product=Z-ring associated protein ZapG;protein_id=WJG92193.1;transl_table=11 CP118132.1 Genbank gene 3373992 3375359 . + . ID=gene-PUW35_16480;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=PUW35_16480 CP118132.1 Protein Homology CDS 3373992 3375359 . + 0 ID=cds-WJG92194.1;Parent=gene-PUW35_16480;Dbxref=NCBI_GP:WJG92194.1;Name=WJG92194.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=PUW35_16480;product=serine endoprotease DegQ;protein_id=WJG92194.1;transl_table=11 CP118132.1 Genbank gene 3375452 3376522 . + . ID=gene-PUW35_16485;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=PUW35_16485 CP118132.1 Protein Homology CDS 3375452 3376522 . + 0 ID=cds-WJG92195.1;Parent=gene-PUW35_16485;Dbxref=NCBI_GP:WJG92195.1;Name=WJG92195.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=PUW35_16485;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WJG92195.1;transl_table=11 CP118132.1 Genbank gene 3376556 3377254 . - . ID=gene-PUW35_16490;Name=PUW35_16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16490 CP118132.1 Protein Homology CDS 3376556 3377254 . - 0 ID=cds-WJG92196.1;Parent=gene-PUW35_16490;Dbxref=NCBI_GP:WJG92196.1;Name=WJG92196.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537623.1;locus_tag=PUW35_16490;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WJG92196.1;transl_table=11 CP118132.1 Genbank gene 3377306 3378607 . - . ID=gene-PUW35_16495;Name=PUW35_16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16495 CP118132.1 Protein Homology CDS 3377306 3378607 . - 0 ID=cds-WJG92197.1;Parent=gene-PUW35_16495;Dbxref=NCBI_GP:WJG92197.1;Name=WJG92197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW35_16495;product=oxalacetate decarboxylase subunit beta;protein_id=WJG92197.1;transl_table=11 CP118132.1 Genbank gene 3378620 3380392 . - . ID=gene-PUW35_16500;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW35_16500 CP118132.1 Protein Homology CDS 3378620 3380392 . - 0 ID=cds-WJG92198.1;Parent=gene-PUW35_16500;Dbxref=NCBI_GP:WJG92198.1;Name=WJG92198.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW35_16500;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJG92198.1;transl_table=11 CP118132.1 Genbank gene 3380408 3380650 . - . ID=gene-PUW35_16505;Name=PUW35_16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16505 CP118132.1 Protein Homology CDS 3380408 3380650 . - 0 ID=cds-WJG92199.1;Parent=gene-PUW35_16505;Dbxref=NCBI_GP:WJG92199.1;Name=WJG92199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=PUW35_16505;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJG92199.1;transl_table=11 CP118132.1 Genbank gene 3380807 3381424 . - . ID=gene-PUW35_16510;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=PUW35_16510 CP118132.1 Protein Homology CDS 3380807 3381424 . - 0 ID=cds-WJG92200.1;Parent=gene-PUW35_16510;Dbxref=NCBI_GP:WJG92200.1;Name=WJG92200.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=PUW35_16510;product=L(+)-tartrate dehydratase subunit beta;protein_id=WJG92200.1;transl_table=11 CP118132.1 Genbank gene 3381424 3382323 . - . ID=gene-PUW35_16515;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=PUW35_16515 CP118132.1 Protein Homology CDS 3381424 3382323 . - 0 ID=cds-WJG92201.1;Parent=gene-PUW35_16515;Dbxref=NCBI_GP:WJG92201.1;Name=WJG92201.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=PUW35_16515;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WJG92201.1;transl_table=11 CP118132.1 Genbank gene 3382356 3383624 . - . ID=gene-PUW35_16520;Name=PUW35_16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16520 CP118132.1 Protein Homology CDS 3382356 3383624 . - 0 ID=cds-WJG92202.1;Parent=gene-PUW35_16520;Dbxref=NCBI_GP:WJG92202.1;Name=WJG92202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=PUW35_16520;product=SLC13 family permease;protein_id=WJG92202.1;transl_table=11 CP118132.1 Genbank gene 3383835 3384500 . - . ID=gene-PUW35_16525;Name=PUW35_16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16525 CP118132.1 Protein Homology CDS 3383835 3384500 . - 0 ID=cds-WJG92203.1;Parent=gene-PUW35_16525;Dbxref=NCBI_GP:WJG92203.1;Name=WJG92203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=PUW35_16525;product=GntR family transcriptional regulator;protein_id=WJG92203.1;transl_table=11 CP118132.1 Genbank gene 3384487 3385116 . - . ID=gene-PUW35_16530;Name=PUW35_16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16530 CP118132.1 Protein Homology CDS 3384487 3385116 . - 0 ID=cds-WJG92204.1;Parent=gene-PUW35_16530;Dbxref=NCBI_GP:WJG92204.1;Name=WJG92204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=PUW35_16530;product=GntR family transcriptional regulator;protein_id=WJG92204.1;transl_table=11 CP118132.1 Genbank gene 3385236 3386174 . - . ID=gene-PUW35_16535;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=PUW35_16535 CP118132.1 Protein Homology CDS 3385236 3386174 . - 0 ID=cds-WJG92205.1;Parent=gene-PUW35_16535;Dbxref=NCBI_GP:WJG92205.1;Name=WJG92205.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=PUW35_16535;product=malate dehydrogenase;protein_id=WJG92205.1;transl_table=11 CP118132.1 Genbank gene 3386589 3387059 . + . ID=gene-PUW35_16540;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=PUW35_16540 CP118132.1 Protein Homology CDS 3386589 3387059 . + 0 ID=cds-WJG92206.1;Parent=gene-PUW35_16540;Dbxref=NCBI_GP:WJG92206.1;Name=WJG92206.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=PUW35_16540;product=transcriptional regulator ArgR;protein_id=WJG92206.1;transl_table=11 CP118132.1 Genbank gene 3387423 3387686 . + . ID=gene-PUW35_16545;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=PUW35_16545 CP118132.1 Protein Homology CDS 3387423 3387686 . + 0 ID=cds-WJG92207.1;Parent=gene-PUW35_16545;Dbxref=NCBI_GP:WJG92207.1;Name=WJG92207.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=PUW35_16545;product=peroxide/acid stress response protein YhcN;protein_id=WJG92207.1;transl_table=11 CP118132.1 Genbank gene 3387790 3388056 . + . ID=gene-PUW35_16550;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=PUW35_16550 CP118132.1 Protein Homology CDS 3387790 3388056 . + 0 ID=cds-WJG92208.1;Parent=gene-PUW35_16550;Dbxref=NCBI_GP:WJG92208.1;Name=WJG92208.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=PUW35_16550;product=DUF1471 family stress response protein YhcN-B;protein_id=WJG92208.1;transl_table=11 CP118132.1 Genbank gene 3388116 3388388 . - . ID=gene-PUW35_16555;Name=PUW35_16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16555 CP118132.1 Protein Homology CDS 3388116 3388388 . - 0 ID=cds-WJG92209.1;Parent=gene-PUW35_16555;Dbxref=NCBI_GP:WJG92209.1;Name=WJG92209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=PUW35_16555;product=hypothetical protein;protein_id=WJG92209.1;transl_table=11 CP118132.1 Genbank gene 3388560 3390527 . - . ID=gene-PUW35_16560;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=PUW35_16560 CP118132.1 Protein Homology CDS 3388560 3390527 . - 0 ID=cds-WJG92210.1;Parent=gene-PUW35_16560;Dbxref=NCBI_GP:WJG92210.1;Name=WJG92210.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=PUW35_16560;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WJG92210.1;transl_table=11 CP118132.1 Genbank gene 3390533 3391465 . - . ID=gene-PUW35_16565;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=PUW35_16565 CP118132.1 Protein Homology CDS 3390533 3391465 . - 0 ID=cds-WJG92211.1;Parent=gene-PUW35_16565;Dbxref=NCBI_GP:WJG92211.1;Name=WJG92211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=PUW35_16565;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WJG92211.1;transl_table=11 CP118132.1 Genbank gene 3391473 3391676 . - . ID=gene-PUW35_16570;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=PUW35_16570 CP118132.1 Protein Homology CDS 3391473 3391676 . - 0 ID=cds-WJG92212.1;Parent=gene-PUW35_16570;Dbxref=NCBI_GP:WJG92212.1;Name=WJG92212.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=PUW35_16570;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WJG92212.1;transl_table=11 CP118132.1 Genbank gene 3391858 3392787 . + . ID=gene-PUW35_16575;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=PUW35_16575 CP118132.1 Protein Homology CDS 3391858 3392787 . + 0 ID=cds-WJG92213.1;Parent=gene-PUW35_16575;Dbxref=NCBI_GP:WJG92213.1;Name=WJG92213.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=PUW35_16575;product=HTH-type transcriptional activator AaeR;protein_id=WJG92213.1;transl_table=11 CP118132.1 Genbank gene 3392910 3394355 . - . ID=gene-PUW35_16580;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=PUW35_16580 CP118132.1 Protein Homology CDS 3392910 3394355 . - 0 ID=cds-WJG92214.1;Parent=gene-PUW35_16580;Dbxref=NCBI_GP:WJG92214.1;Name=WJG92214.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=PUW35_16580;product=metalloprotease TldD;protein_id=WJG92214.1;transl_table=11 CP118132.1 Genbank pseudogene 3394500 3398296 . - . ID=gene-PUW35_16585;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=pseudogene;locus_tag=PUW35_16585;pseudo=true CP118132.1 Protein Homology CDS 3394500 3398296 . - 0 ID=cds-PUW35_16585;Parent=gene-PUW35_16585;Note=frameshifted;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=PUW35_16585;product=AsmA2 domain-containing protein YhdP;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3398407 3399876 . - . ID=gene-PUW35_16590;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=PUW35_16590 CP118132.1 Protein Homology CDS 3398407 3399876 . - 0 ID=cds-WJG92215.1;Parent=gene-PUW35_16590;Dbxref=NCBI_GP:WJG92215.1;Name=WJG92215.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=PUW35_16590;product=ribonuclease G;protein_id=WJG92215.1;transl_table=11 CP118132.1 Genbank gene 3399866 3400459 . - . ID=gene-PUW35_16595;Name=PUW35_16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16595 CP118132.1 Protein Homology CDS 3399866 3400459 . - 0 ID=cds-WJG92216.1;Parent=gene-PUW35_16595;Dbxref=NCBI_GP:WJG92216.1;Name=WJG92216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=PUW35_16595;product=Maf family protein;protein_id=WJG92216.1;transl_table=11 CP118132.1 Genbank gene 3400468 3400956 . - . ID=gene-PUW35_16600;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=PUW35_16600 CP118132.1 Protein Homology CDS 3400468 3400956 . - 0 ID=cds-WJG95129.1;Parent=gene-PUW35_16600;Dbxref=NCBI_GP:WJG95129.1;Name=WJG95129.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=PUW35_16600;product=rod shape-determining protein MreD;protein_id=WJG95129.1;transl_table=11 CP118132.1 Genbank gene 3400959 3402011 . - . ID=gene-PUW35_16605;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=PUW35_16605 CP118132.1 Protein Homology CDS 3400959 3402011 . - 0 ID=cds-WJG92217.1;Parent=gene-PUW35_16605;Dbxref=NCBI_GP:WJG92217.1;Name=WJG92217.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=PUW35_16605;product=rod shape-determining protein MreC;protein_id=WJG92217.1;transl_table=11 CP118132.1 Genbank gene 3402076 3403119 . - . ID=gene-PUW35_16610;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=PUW35_16610 CP118132.1 Protein Homology CDS 3402076 3403119 . - 0 ID=cds-WJG92218.1;Parent=gene-PUW35_16610;Dbxref=NCBI_GP:WJG92218.1;Name=WJG92218.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=PUW35_16610;product=rod shape-determining protein MreB;protein_id=WJG92218.1;transl_table=11 CP118132.1 Genbank gene 3403427 3405367 . - . ID=gene-PUW35_16615;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=PUW35_16615 CP118132.1 Protein Homology CDS 3403427 3405367 . - 0 ID=cds-WJG92219.1;Parent=gene-PUW35_16615;Dbxref=NCBI_GP:WJG92219.1;Name=WJG92219.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=PUW35_16615;product=RNase E specificity factor CsrD;protein_id=WJG92219.1;transl_table=11 CP118132.1 Genbank gene 3405571 3406545 . + . ID=gene-PUW35_16620;Name=PUW35_16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16620 CP118132.1 Protein Homology CDS 3405571 3406545 . + 0 ID=cds-WJG92220.1;Parent=gene-PUW35_16620;Dbxref=NCBI_GP:WJG92220.1;Name=WJG92220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=PUW35_16620;product=oxidoreductase;protein_id=WJG92220.1;transl_table=11 CP118132.1 Genbank gene 3406658 3407662 . + . ID=gene-PUW35_16625;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=PUW35_16625 CP118132.1 Protein Homology CDS 3406658 3407662 . + 0 ID=cds-WJG92221.1;Parent=gene-PUW35_16625;Dbxref=NCBI_GP:WJG92221.1;Name=WJG92221.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=PUW35_16625;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WJG92221.1;transl_table=11 CP118132.1 Genbank gene 3407663 3408262 . + . ID=gene-PUW35_16630;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=PUW35_16630 CP118132.1 Protein Homology CDS 3407663 3408262 . + 0 ID=cds-WJG92222.1;Parent=gene-PUW35_16630;Dbxref=NCBI_GP:WJG92222.1;Name=WJG92222.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=PUW35_16630;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WJG92222.1;transl_table=11 CP118132.1 Genbank gene 3408655 3409125 . + . ID=gene-PUW35_16635;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=PUW35_16635 CP118132.1 Protein Homology CDS 3408655 3409125 . + 0 ID=cds-WJG92223.1;Parent=gene-PUW35_16635;Dbxref=NCBI_GP:WJG92223.1;Name=WJG92223.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=PUW35_16635;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WJG92223.1;transl_table=11 CP118132.1 Genbank gene 3409136 3410485 . + . ID=gene-PUW35_16640;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PUW35_16640 CP118132.1 Protein Homology CDS 3409136 3410485 . + 0 ID=cds-WJG92224.1;Parent=gene-PUW35_16640;Dbxref=NCBI_GP:WJG92224.1;Name=WJG92224.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=PUW35_16640;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WJG92224.1;transl_table=11 CP118132.1 Genbank gene 3410594 3410836 . + . ID=gene-PUW35_16645;Name=PUW35_16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16645 CP118132.1 Protein Homology CDS 3410594 3410836 . + 0 ID=cds-WJG92225.1;Parent=gene-PUW35_16645;Dbxref=NCBI_GP:WJG92225.1;Name=WJG92225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=PUW35_16645;product=YhdT family protein;protein_id=WJG92225.1;transl_table=11 CP118132.1 Genbank gene 3410826 3412277 . + . ID=gene-PUW35_16650;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=PUW35_16650 CP118132.1 Protein Homology CDS 3410826 3412277 . + 0 ID=cds-WJG92226.1;Parent=gene-PUW35_16650;Dbxref=NCBI_GP:WJG92226.1;Name=WJG92226.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=PUW35_16650;product=sodium/pantothenate symporter;protein_id=WJG92226.1;transl_table=11 CP118132.1 Genbank gene 3412289 3413170 . + . ID=gene-PUW35_16655;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=PUW35_16655 CP118132.1 Protein Homology CDS 3412289 3413170 . + 0 ID=cds-WJG92227.1;Parent=gene-PUW35_16655;Dbxref=NCBI_GP:WJG92227.1;Name=WJG92227.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=PUW35_16655;product=50S ribosomal protein L11 methyltransferase;protein_id=WJG92227.1;transl_table=11 CP118132.1 Genbank gene 3413831 3414796 . + . ID=gene-PUW35_16660;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=PUW35_16660 CP118132.1 Protein Homology CDS 3413831 3414796 . + 0 ID=cds-WJG92228.1;Parent=gene-PUW35_16660;Dbxref=NCBI_GP:WJG92228.1;Name=WJG92228.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=PUW35_16660;product=tRNA dihydrouridine synthase DusB;protein_id=WJG92228.1;transl_table=11 CP118132.1 Genbank gene 3414822 3415118 . + . ID=gene-PUW35_16665;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=PUW35_16665 CP118132.1 Protein Homology CDS 3414822 3415118 . + 0 ID=cds-WJG92229.1;Parent=gene-PUW35_16665;Dbxref=NCBI_GP:WJG92229.1;Name=WJG92229.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=PUW35_16665;product=DNA-binding transcriptional regulator Fis;protein_id=WJG92229.1;transl_table=11 CP118132.1 Genbank gene 3415204 3416088 . + . ID=gene-PUW35_16670;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=PUW35_16670 CP118132.1 Protein Homology CDS 3415204 3416088 . + 0 ID=cds-WJG92230.1;Parent=gene-PUW35_16670;Dbxref=NCBI_GP:WJG92230.1;Name=WJG92230.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=PUW35_16670;product=adenine-specific DNA-methyltransferase;protein_id=WJG92230.1;transl_table=11 CP118132.1 Genbank gene 3416171 3416335 . + . ID=gene-PUW35_16675;Name=PUW35_16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16675 CP118132.1 Protein Homology CDS 3416171 3416335 . + 0 ID=cds-WJG92231.1;Parent=gene-PUW35_16675;Dbxref=NCBI_GP:WJG92231.1;Name=WJG92231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=PUW35_16675;product=DUF2556 family protein;protein_id=WJG92231.1;transl_table=11 CP118132.1 Genbank gene 3416486 3418585 . + . ID=gene-PUW35_16680;Name=PUW35_16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16680 CP118132.1 Protein Homology CDS 3416486 3418585 . + 0 ID=cds-WJG92232.1;Parent=gene-PUW35_16680;Dbxref=NCBI_GP:WJG92232.1;Name=WJG92232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=PUW35_16680;product=EAL domain-containing protein;protein_id=WJG92232.1;transl_table=11 CP118132.1 Genbank gene 3418588 3419250 . - . ID=gene-PUW35_16685;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=PUW35_16685 CP118132.1 Protein Homology CDS 3418588 3419250 . - 0 ID=cds-WJG92233.1;Parent=gene-PUW35_16685;Dbxref=NCBI_GP:WJG92233.1;Name=WJG92233.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=PUW35_16685;product=acrEF/envCD operon transcriptional regulator;protein_id=WJG92233.1;transl_table=11 CP118132.1 Genbank gene 3419663 3420820 . + . ID=gene-PUW35_16690;Name=PUW35_16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16690 CP118132.1 Protein Homology CDS 3419663 3420820 . + 0 ID=cds-WJG92234.1;Parent=gene-PUW35_16690;Dbxref=NCBI_GP:WJG92234.1;Name=WJG92234.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=PUW35_16690;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WJG92234.1;transl_table=11 CP118132.1 Genbank pseudogene 3420832 3423944 . + . ID=gene-PUW35_16695;Name=PUW35_16695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_16695;pseudo=true CP118132.1 Protein Homology CDS 3420832 3423944 . + 0 ID=cds-PUW35_16695;Parent=gene-PUW35_16695;Note=frameshifted;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=PUW35_16695;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3424182 3424403 . + . ID=gene-PUW35_16700;Name=PUW35_16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16700 CP118132.1 Protein Homology CDS 3424182 3424403 . + 0 ID=cds-WJG92235.1;Parent=gene-PUW35_16700;Dbxref=NCBI_GP:WJG92235.1;Name=WJG92235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=PUW35_16700;product=hypothetical protein;protein_id=WJG92235.1;transl_table=11 CP118132.1 Genbank gene 3425187 3425302 . - . ID=gene-PUW35_16705;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW35_16705 CP118132.1 cmsearch rRNA 3425187 3425302 . - . ID=rna-PUW35_16705;Parent=gene-PUW35_16705;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_16705;product=5S ribosomal RNA CP118132.1 cmsearch exon 3425187 3425302 . - . ID=exon-PUW35_16705-1;Parent=rna-PUW35_16705;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_16705;product=5S ribosomal RNA CP118132.1 Genbank gene 3425342 3425417 . - . ID=gene-PUW35_16710;Name=PUW35_16710;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_16710 CP118132.1 tRNAscan-SE tRNA 3425342 3425417 . - . ID=rna-PUW35_16710;Parent=gene-PUW35_16710;anticodon=(pos:complement(3425382..3425384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16710;product=tRNA-Thr CP118132.1 tRNAscan-SE exon 3425342 3425417 . - . ID=exon-PUW35_16710-1;Parent=rna-PUW35_16710;anticodon=(pos:complement(3425382..3425384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16710;product=tRNA-Thr CP118132.1 Genbank gene 3425432 3425547 . - . ID=gene-PUW35_16715;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW35_16715 CP118132.1 cmsearch rRNA 3425432 3425547 . - . ID=rna-PUW35_16715;Parent=gene-PUW35_16715;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_16715;product=5S ribosomal RNA CP118132.1 cmsearch exon 3425432 3425547 . - . ID=exon-PUW35_16715-1;Parent=rna-PUW35_16715;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_16715;product=5S ribosomal RNA CP118132.1 Genbank gene 3425744 3428732 . - . ID=gene-PUW35_16720;Name=PUW35_16720;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_16720 CP118132.1 cmsearch rRNA 3425744 3428732 . - . ID=rna-PUW35_16720;Parent=gene-PUW35_16720;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_16720;product=23S ribosomal RNA CP118132.1 cmsearch exon 3425744 3428732 . - . ID=exon-PUW35_16720-1;Parent=rna-PUW35_16720;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_16720;product=23S ribosomal RNA CP118132.1 Genbank gene 3428915 3428990 . - . ID=gene-PUW35_16725;Name=PUW35_16725;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_16725 CP118132.1 tRNAscan-SE tRNA 3428915 3428990 . - . ID=rna-PUW35_16725;Parent=gene-PUW35_16725;anticodon=(pos:complement(3428955..3428957));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16725;product=tRNA-Ala CP118132.1 tRNAscan-SE exon 3428915 3428990 . - . ID=exon-PUW35_16725-1;Parent=rna-PUW35_16725;anticodon=(pos:complement(3428955..3428957));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16725;product=tRNA-Ala CP118132.1 Genbank gene 3429102 3429178 . - . ID=gene-PUW35_16730;Name=PUW35_16730;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_16730 CP118132.1 tRNAscan-SE tRNA 3429102 3429178 . - . ID=rna-PUW35_16730;Parent=gene-PUW35_16730;anticodon=(pos:complement(3429142..3429144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16730;product=tRNA-Ile CP118132.1 tRNAscan-SE exon 3429102 3429178 . - . ID=exon-PUW35_16730-1;Parent=rna-PUW35_16730;anticodon=(pos:complement(3429142..3429144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_16730;product=tRNA-Ile CP118132.1 Genbank gene 3429248 3430789 . - . ID=gene-PUW35_16735;Name=PUW35_16735;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_16735 CP118132.1 cmsearch rRNA 3429248 3430789 . - . ID=rna-PUW35_16735;Parent=gene-PUW35_16735;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_16735;product=16S ribosomal RNA CP118132.1 cmsearch exon 3429248 3430789 . - . ID=exon-PUW35_16735-1;Parent=rna-PUW35_16735;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_16735;product=16S ribosomal RNA CP118132.1 Genbank gene 3431172 3432023 . - . ID=gene-PUW35_16740;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=PUW35_16740 CP118132.1 Protein Homology CDS 3431172 3432023 . - 0 ID=cds-WJG92236.1;Parent=gene-PUW35_16740;Dbxref=NCBI_GP:WJG92236.1;Name=WJG92236.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=PUW35_16740;product=glutamate racemase;protein_id=WJG92236.1;transl_table=11 CP118132.1 Genbank pseudogene 3431968 3433812 . - . ID=gene-PUW35_16745;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=pseudogene;locus_tag=PUW35_16745;pseudo=true CP118132.1 Protein Homology CDS 3431968 3433812 . - 0 ID=cds-PUW35_16745;Parent=gene-PUW35_16745;Note=internal stop;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=PUW35_16745;product=TonB-dependent vitamin B12 receptor BtuB;pseudo=true;transl_table=11 CP118132.1 cmsearch riboswitch 3433878 3434071 . - . ID=id-CP118132.1:3433878..3434071;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118132.1 Genbank gene 3434186 3435286 . + . ID=gene-PUW35_16750;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=PUW35_16750 CP118132.1 Protein Homology CDS 3434186 3435286 . + 0 ID=cds-WJG92237.1;Parent=gene-PUW35_16750;Dbxref=NCBI_GP:WJG92237.1;Name=WJG92237.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=PUW35_16750;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WJG92237.1;transl_table=11 CP118132.1 Genbank pseudogene 3435336 3435692 . - . ID=gene-PUW35_16755;Name=PUW35_16755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_16755;pseudo=true CP118132.1 Protein Homology CDS 3435336 3435692 . - 0 ID=cds-PUW35_16755;Parent=gene-PUW35_16755;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=PUW35_16755;product=YijD family membrane protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3435708 3436343 . - . ID=gene-PUW35_16760;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=PUW35_16760 CP118132.1 Protein Homology CDS 3435708 3436343 . - 0 ID=cds-WJG92238.1;Parent=gene-PUW35_16760;Dbxref=NCBI_GP:WJG92238.1;Name=WJG92238.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=PUW35_16760;product=HTH-type transcriptional repressor FabR;protein_id=WJG92238.1;transl_table=11 CP118132.1 Genbank gene 3436542 3437942 . + . ID=gene-PUW35_16765;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=PUW35_16765 CP118132.1 Protein Homology CDS 3436542 3437942 . + 0 ID=cds-WJG92239.1;Parent=gene-PUW35_16765;Dbxref=NCBI_GP:WJG92239.1;Name=WJG92239.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=PUW35_16765;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WJG92239.1;transl_table=11 CP118132.1 Genbank gene 3437925 3438842 . - . ID=gene-PUW35_16770;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=PUW35_16770 CP118132.1 Protein Homology CDS 3437925 3438842 . - 0 ID=cds-WJG92240.1;Parent=gene-PUW35_16770;Dbxref=NCBI_GP:WJG92240.1;Name=WJG92240.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=PUW35_16770;product=DNA-binding transcriptional regulator OxyR;protein_id=WJG92240.1;transl_table=11 CP118132.1 Genbank gene 3439126 3440502 . - . ID=gene-PUW35_16775;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=PUW35_16775 CP118132.1 Protein Homology CDS 3439126 3440502 . - 0 ID=cds-WJG92241.1;Parent=gene-PUW35_16775;Dbxref=NCBI_GP:WJG92241.1;Name=WJG92241.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=PUW35_16775;product=argininosuccinate lyase;protein_id=WJG92241.1;transl_table=11 CP118132.1 Genbank gene 3440620 3441396 . - . ID=gene-PUW35_16780;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=PUW35_16780 CP118132.1 Protein Homology CDS 3440620 3441396 . - 0 ID=cds-WJG92242.1;Parent=gene-PUW35_16780;Dbxref=NCBI_GP:WJG92242.1;Name=WJG92242.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=PUW35_16780;product=acetylglutamate kinase;protein_id=WJG92242.1;transl_table=11 CP118132.1 Genbank pseudogene 3441404 3442407 . - . ID=gene-PUW35_16785;Name=argC;gbkey=Gene;gene=argC;gene_biotype=pseudogene;locus_tag=PUW35_16785;pseudo=true CP118132.1 Protein Homology CDS 3441404 3442407 . - 0 ID=cds-PUW35_16785;Parent=gene-PUW35_16785;Note=frameshifted;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=PUW35_16785;product=N-acetyl-gamma-glutamyl-phosphate reductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3442496 3443647 . + . ID=gene-PUW35_16790;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=PUW35_16790 CP118132.1 Protein Homology CDS 3442496 3443647 . + 0 ID=cds-WJG92243.1;Parent=gene-PUW35_16790;Dbxref=NCBI_GP:WJG92243.1;Name=WJG92243.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=PUW35_16790;product=acetylornithine deacetylase;protein_id=WJG92243.1;transl_table=11 CP118132.1 Genbank gene 3444016 3446667 . + . ID=gene-PUW35_16795;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=PUW35_16795 CP118132.1 Protein Homology CDS 3444016 3446667 . + 0 ID=cds-WJG92244.1;Parent=gene-PUW35_16795;Dbxref=NCBI_GP:WJG92244.1;Name=WJG92244.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=PUW35_16795;product=phosphoenolpyruvate carboxylase;protein_id=WJG92244.1;transl_table=11 CP118132.1 Genbank pseudogene 3446878 3448610 . + . ID=gene-PUW35_16800;Name=PUW35_16800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_16800;pseudo=true CP118132.1 Protein Homology CDS 3446878 3448610 . + 0 ID=cds-PUW35_16800;Parent=gene-PUW35_16800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=PUW35_16800;product=phosphoethanolamine transferase CptA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3448771 3449622 . + . ID=gene-PUW35_16805;Name=PUW35_16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16805 CP118132.1 Protein Homology CDS 3448771 3449622 . + 0 ID=cds-WJG92245.1;Parent=gene-PUW35_16805;Dbxref=NCBI_GP:WJG92245.1;Name=WJG92245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=PUW35_16805;product=AraC family transcriptional regulator;protein_id=WJG92245.1;transl_table=11 CP118132.1 Genbank gene 3449609 3449962 . - . ID=gene-PUW35_16810;Name=PUW35_16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16810 CP118132.1 Protein Homology CDS 3449609 3449962 . - 0 ID=cds-WJG92246.1;Parent=gene-PUW35_16810;Dbxref=NCBI_GP:WJG92246.1;Name=WJG92246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=PUW35_16810;product=PTS fructose-like transporter subunit IIB;protein_id=WJG92246.1;transl_table=11 CP118132.1 Genbank gene 3449964 3450842 . - . ID=gene-PUW35_16815;Name=PUW35_16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16815 CP118132.1 Protein Homology CDS 3449964 3450842 . - 0 ID=cds-WJG92247.1;Parent=gene-PUW35_16815;Dbxref=NCBI_GP:WJG92247.1;Name=WJG92247.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=PUW35_16815;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WJG92247.1;transl_table=11 CP118132.1 Genbank pseudogene 3450808 3453104 . - . ID=gene-PUW35_16820;Name=PUW35_16820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_16820;pseudo=true CP118132.1 Protein Homology CDS 3450808 3453104 . - 0 ID=cds-PUW35_16820;Parent=gene-PUW35_16820;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=PUW35_16820;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3453203 3453523 . - . ID=gene-PUW35_16825;Name=PUW35_16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16825 CP118132.1 Protein Homology CDS 3453203 3453523 . - 0 ID=cds-WJG92248.1;Parent=gene-PUW35_16825;Dbxref=NCBI_GP:WJG92248.1;Name=WJG92248.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=PUW35_16825;product=PTS fructose-like transporter subunit IIB;protein_id=WJG92248.1;transl_table=11 CP118132.1 Genbank gene 3453538 3454617 . - . ID=gene-PUW35_16830;Name=PUW35_16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16830 CP118132.1 Protein Homology CDS 3453538 3454617 . - 0 ID=cds-WJG92249.1;Parent=gene-PUW35_16830;Dbxref=NCBI_GP:WJG92249.1;Name=WJG92249.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=PUW35_16830;product=PTS fructose transporter subunit EIIC;protein_id=WJG92249.1;transl_table=11 CP118132.1 Genbank pseudogene 3454926 3457427 . + . ID=gene-PUW35_16835;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=pseudogene;locus_tag=PUW35_16835;pseudo=true CP118132.1 Protein Homology CDS 3454926 3457427 . + 0 ID=cds-PUW35_16835;Parent=gene-PUW35_16835;Note=internal stop;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=PUW35_16835;product=phosphoenolpyruvate--protein phosphotransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3457438 3458100 . + . ID=gene-PUW35_16840;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=PUW35_16840 CP118132.1 Protein Homology CDS 3457438 3458100 . + 0 ID=cds-WJG92250.1;Parent=gene-PUW35_16840;Dbxref=NCBI_GP:WJG92250.1;Name=WJG92250.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=PUW35_16840;product=fructose-6-phosphate aldolase;protein_id=WJG92250.1;transl_table=11 CP118132.1 Genbank gene 3458112 3459215 . + . ID=gene-PUW35_16845;Name=PUW35_16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16845 CP118132.1 Protein Homology CDS 3458112 3459215 . + 0 ID=cds-WJG92251.1;Parent=gene-PUW35_16845;Dbxref=NCBI_GP:WJG92251.1;Name=WJG92251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=PUW35_16845;product=glycerol dehydrogenase;protein_id=WJG92251.1;transl_table=11 CP118132.1 Genbank gene 3459474 3460097 . + . ID=gene-PUW35_16850;Name=PUW35_16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16850 CP118132.1 Protein Homology CDS 3459474 3460097 . + 0 ID=cds-WJG92252.1;Parent=gene-PUW35_16850;Dbxref=NCBI_GP:WJG92252.1;Name=WJG92252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=PUW35_16850;product=DUF1287 domain-containing protein;protein_id=WJG92252.1;transl_table=11 CP118132.1 Genbank gene 3460155 3462335 . - . ID=gene-PUW35_16855;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=PUW35_16855 CP118132.1 Protein Homology CDS 3460155 3462335 . - 0 ID=cds-WJG92253.1;Parent=gene-PUW35_16855;Dbxref=NCBI_GP:WJG92253.1;Name=WJG92253.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=PUW35_16855;product=catalase/peroxidase HPI;protein_id=WJG92253.1;transl_table=11 CP118132.1 Genbank gene 3462500 3463390 . - . ID=gene-PUW35_16860;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=PUW35_16860 CP118132.1 Protein Homology CDS 3462500 3463390 . - 0 ID=cds-WJG92254.1;Parent=gene-PUW35_16860;Dbxref=NCBI_GP:WJG92254.1;Name=WJG92254.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=PUW35_16860;product=methylenetetrahydrofolate reductase;protein_id=WJG92254.1;transl_table=11 CP118132.1 Genbank gene 3463669 3465150 . + . ID=gene-PUW35_16865;Name=PUW35_16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16865 CP118132.1 Protein Homology CDS 3463669 3465150 . + 0 ID=cds-WJG92255.1;Parent=gene-PUW35_16865;Dbxref=NCBI_GP:WJG92255.1;Name=WJG92255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090461.1;locus_tag=PUW35_16865;product=PLP-dependent aminotransferase family protein;protein_id=WJG92255.1;transl_table=11 CP118132.1 Genbank gene 3465095 3466171 . - . ID=gene-PUW35_16870;Name=PUW35_16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16870 CP118132.1 Protein Homology CDS 3465095 3466171 . - 0 ID=cds-WJG92256.1;Parent=gene-PUW35_16870;Dbxref=NCBI_GP:WJG92256.1;Name=WJG92256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976816.1;locus_tag=PUW35_16870;product=alanine racemase 3;protein_id=WJG92256.1;transl_table=11 CP118132.1 Genbank gene 3466168 3467406 . - . ID=gene-PUW35_16875;Name=PUW35_16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16875 CP118132.1 Protein Homology CDS 3466168 3467406 . - 0 ID=cds-WJG92257.1;Parent=gene-PUW35_16875;Dbxref=NCBI_GP:WJG92257.1;Name=WJG92257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341216.1;locus_tag=PUW35_16875;product=serine hydroxymethyltransferase;protein_id=WJG92257.1;transl_table=11 CP118132.1 Genbank gene 3467670 3469226 . - . ID=gene-PUW35_16880;Name=PUW35_16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16880 CP118132.1 Protein Homology CDS 3467670 3469226 . - 0 ID=cds-WJG92258.1;Parent=gene-PUW35_16880;Dbxref=NCBI_GP:WJG92258.1;Name=WJG92258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=PUW35_16880;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WJG92258.1;transl_table=11 CP118132.1 Genbank gene 3469362 3470486 . + . ID=gene-PUW35_16885;Name=PUW35_16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16885 CP118132.1 Protein Homology CDS 3469362 3470486 . + 0 ID=cds-WJG92259.1;Parent=gene-PUW35_16885;Dbxref=NCBI_GP:WJG92259.1;Name=WJG92259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=PUW35_16885;product=cytoplasmic protein;protein_id=WJG92259.1;transl_table=11 CP118132.1 Genbank gene 3470721 3471719 . + . ID=gene-PUW35_16890;Name=PUW35_16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16890 CP118132.1 Protein Homology CDS 3470721 3471719 . + 0 ID=cds-WJG92260.1;Parent=gene-PUW35_16890;Dbxref=NCBI_GP:WJG92260.1;Name=WJG92260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=PUW35_16890;product=hypothetical protein;protein_id=WJG92260.1;transl_table=11 CP118132.1 Genbank gene 3471722 3472579 . + . ID=gene-PUW35_16895;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=PUW35_16895 CP118132.1 Protein Homology CDS 3471722 3472579 . + 0 ID=cds-WJG92261.1;Parent=gene-PUW35_16895;Dbxref=NCBI_GP:WJG92261.1;Name=WJG92261.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=PUW35_16895;product=small-conductance mechanosensitive channel MscS;protein_id=WJG92261.1;transl_table=11 CP118132.1 Genbank pseudogene 3472695 3475125 . - . ID=gene-PUW35_16900;Name=PUW35_16900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_16900;pseudo=true CP118132.1 Protein Homology CDS 3472695 3475125 . - 0 ID=cds-PUW35_16900;Parent=gene-PUW35_16900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=PUW35_16900;product=bifunctional aspartate kinase/homoserine dehydrogenase II;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3475128 3476288 . - . ID=gene-PUW35_16905;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=PUW35_16905 CP118132.1 Protein Homology CDS 3475128 3476288 . - 0 ID=cds-WJG95130.1;Parent=gene-PUW35_16905;Dbxref=NCBI_GP:WJG95130.1;Name=WJG95130.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=PUW35_16905;product=cystathionine gamma-synthase;protein_id=WJG95130.1;transl_table=11 CP118132.1 Genbank gene 3476553 3476870 . + . ID=gene-PUW35_16910;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=PUW35_16910 CP118132.1 Protein Homology CDS 3476553 3476870 . + 0 ID=cds-WJG92262.1;Parent=gene-PUW35_16910;Dbxref=NCBI_GP:WJG92262.1;Name=WJG92262.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=PUW35_16910;product=met regulon transcriptional regulator MetJ;protein_id=WJG92262.1;transl_table=11 CP118132.1 Genbank gene 3477326 3479113 . + . ID=gene-PUW35_16915;Name=PUW35_16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16915 CP118132.1 Protein Homology CDS 3477326 3479113 . + 0 ID=cds-WJG92263.1;Parent=gene-PUW35_16915;Dbxref=NCBI_GP:WJG92263.1;Name=WJG92263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=PUW35_16915;product=aryl-sulfate sulfotransferase;protein_id=WJG92263.1;transl_table=11 CP118132.1 Genbank gene 3479314 3479976 . + . ID=gene-PUW35_16920;Name=PUW35_16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16920 CP118132.1 Protein Homology CDS 3479314 3479976 . + 0 ID=cds-WJG92264.1;Parent=gene-PUW35_16920;Dbxref=NCBI_GP:WJG92264.1;Name=WJG92264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=PUW35_16920;product=TIGR02117 family protein;protein_id=WJG92264.1;transl_table=11 CP118132.1 Genbank gene 3480021 3480233 . - . ID=gene-PUW35_16925;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=PUW35_16925 CP118132.1 Protein Homology CDS 3480021 3480233 . - 0 ID=cds-WJG95131.1;Parent=gene-PUW35_16925;Dbxref=NCBI_GP:WJG95131.1;Name=WJG95131.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmE;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=PUW35_16925;product=50S ribosomal protein L31;protein_id=WJG95131.1;transl_table=11 CP118132.1 Genbank gene 3480437 3482635 . + . ID=gene-PUW35_16930;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=PUW35_16930 CP118132.1 Protein Homology CDS 3480437 3482635 . + 0 ID=cds-WJG92265.1;Parent=gene-PUW35_16930;Dbxref=NCBI_GP:WJG92265.1;Name=WJG92265.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=PUW35_16930;product=primosomal protein N';protein_id=WJG92265.1;transl_table=11 CP118132.1 Genbank gene 3482790 3483815 . + . ID=gene-PUW35_16935;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=PUW35_16935 CP118132.1 Protein Homology CDS 3482790 3483815 . + 0 ID=cds-WJG92266.1;Parent=gene-PUW35_16935;Dbxref=NCBI_GP:WJG92266.1;Name=WJG92266.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=PUW35_16935;product=DNA-binding transcriptional regulator CytR;protein_id=WJG92266.1;transl_table=11 CP118132.1 Genbank gene 3483909 3484883 . + . ID=gene-PUW35_16940;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=PUW35_16940 CP118132.1 Protein Homology CDS 3483909 3484883 . + 0 ID=cds-WJG92267.1;Parent=gene-PUW35_16940;Dbxref=NCBI_GP:WJG92267.1;Name=WJG92267.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=PUW35_16940;product=cell division protein FtsN;protein_id=WJG92267.1;transl_table=11 CP118132.1 Genbank pseudogene 3484975 3485504 . + . ID=gene-PUW35_16945;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=pseudogene;locus_tag=PUW35_16945;pseudo=true CP118132.1 Protein Homology CDS 3484975 3485504 . + 0 ID=cds-PUW35_16945;Parent=gene-PUW35_16945;Note=frameshifted;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=PUW35_16945;product=ATP-dependent protease subunit HslV;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3485514 3486844 . + . ID=gene-PUW35_16950;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=pseudogene;locus_tag=PUW35_16950;pseudo=true CP118132.1 Protein Homology CDS 3485514 3486844 . + 0 ID=cds-PUW35_16950;Parent=gene-PUW35_16950;Note=frameshifted;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=PUW35_16950;product=HslU--HslV peptidase ATPase subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3486911 3487840 . + . ID=gene-PUW35_16955;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=PUW35_16955 CP118132.1 Protein Homology CDS 3486911 3487840 . + 0 ID=cds-WJG92268.1;Parent=gene-PUW35_16955;Dbxref=NCBI_GP:WJG92268.1;Name=WJG92268.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=PUW35_16955;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WJG92268.1;transl_table=11 CP118132.1 Genbank pseudogene 3487933 3488417 . + . ID=gene-PUW35_16960;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=pseudogene;locus_tag=PUW35_16960;pseudo=true CP118132.1 Protein Homology CDS 3487933 3488417 . + 0 ID=cds-PUW35_16960;Parent=gene-PUW35_16960;Note=frameshifted;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=PUW35_16960;product=ribonuclease E activity regulator RraA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3488639 3488878 . - . ID=gene-PUW35_16965;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=PUW35_16965 CP118132.1 Protein Homology CDS 3488639 3488878 . - 0 ID=cds-WJG92269.1;Parent=gene-PUW35_16965;Dbxref=NCBI_GP:WJG92269.1;Name=WJG92269.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=PUW35_16965;product=septal ring assembly protein ZapB;protein_id=WJG92269.1;transl_table=11 CP118132.1 Genbank gene 3489277 3490122 . + . ID=gene-PUW35_16970;Name=PUW35_16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16970 CP118132.1 Protein Homology CDS 3489277 3490122 . + 0 ID=cds-WJG92270.1;Parent=gene-PUW35_16970;Dbxref=NCBI_GP:WJG92270.1;Name=WJG92270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=PUW35_16970;product=aquaporin;protein_id=WJG92270.1;transl_table=11 CP118132.1 Genbank gene 3490143 3491651 . + . ID=gene-PUW35_16975;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=PUW35_16975 CP118132.1 Protein Homology CDS 3490143 3491651 . + 0 ID=cds-WJG92271.1;Parent=gene-PUW35_16975;Dbxref=NCBI_GP:WJG92271.1;Name=WJG92271.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=PUW35_16975;product=glycerol kinase GlpK;protein_id=WJG92271.1;transl_table=11 CP118132.1 Genbank gene 3491763 3492773 . + . ID=gene-PUW35_16980;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=PUW35_16980 CP118132.1 Protein Homology CDS 3491763 3492773 . + 0 ID=cds-WJG92272.1;Parent=gene-PUW35_16980;Dbxref=NCBI_GP:WJG92272.1;Name=WJG92272.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=PUW35_16980;product=class II fructose-bisphosphatase;protein_id=WJG92272.1;transl_table=11 CP118132.1 Genbank gene 3492870 3493616 . + . ID=gene-PUW35_16985;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=PUW35_16985 CP118132.1 Protein Homology CDS 3492870 3493616 . + 0 ID=cds-WJG92273.1;Parent=gene-PUW35_16985;Dbxref=NCBI_GP:WJG92273.1;Name=WJG92273.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=PUW35_16985;product=ferredoxin--NADP(+) reductase;protein_id=WJG92273.1;transl_table=11 CP118132.1 Genbank gene 3493722 3494150 . - . ID=gene-PUW35_16990;Name=PUW35_16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16990 CP118132.1 Protein Homology CDS 3493722 3494150 . - 0 ID=cds-WJG92274.1;Parent=gene-PUW35_16990;Dbxref=NCBI_GP:WJG92274.1;Name=WJG92274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006724708.1;locus_tag=PUW35_16990;product=DUF805 domain-containing protein;protein_id=WJG92274.1;transl_table=11 CP118132.1 Genbank gene 3494251 3494847 . + . ID=gene-PUW35_16995;Name=PUW35_16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_16995 CP118132.1 Protein Homology CDS 3494251 3494847 . + 0 ID=cds-WJG92275.1;Parent=gene-PUW35_16995;Dbxref=NCBI_GP:WJG92275.1;Name=WJG92275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=PUW35_16995;product=YiiQ family protein;protein_id=WJG92275.1;transl_table=11 CP118132.1 Genbank gene 3494960 3495727 . + . ID=gene-PUW35_17000;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=PUW35_17000 CP118132.1 Protein Homology CDS 3494960 3495727 . + 0 ID=cds-WJG92276.1;Parent=gene-PUW35_17000;Dbxref=NCBI_GP:WJG92276.1;Name=WJG92276.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=PUW35_17000;product=triose-phosphate isomerase;protein_id=WJG92276.1;transl_table=11 CP118132.1 Genbank gene 3495819 3496583 . - . ID=gene-PUW35_17005;Name=PUW35_17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17005 CP118132.1 Protein Homology CDS 3495819 3496583 . - 0 ID=cds-WJG92277.1;Parent=gene-PUW35_17005;Dbxref=NCBI_GP:WJG92277.1;Name=WJG92277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=PUW35_17005;product=epimerase;protein_id=WJG92277.1;transl_table=11 CP118132.1 Genbank gene 3496593 3496883 . - . ID=gene-PUW35_17010;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=PUW35_17010 CP118132.1 Protein Homology CDS 3496593 3496883 . - 0 ID=cds-WJG95132.1;Parent=gene-PUW35_17010;Dbxref=NCBI_GP:WJG95132.1;Name=WJG95132.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=PUW35_17010;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WJG95132.1;transl_table=11 CP118132.1 Genbank gene 3496965 3497840 . - . ID=gene-PUW35_17015;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=PUW35_17015 CP118132.1 Protein Homology CDS 3496965 3497840 . - 0 ID=cds-WJG92278.1;Parent=gene-PUW35_17015;Dbxref=NCBI_GP:WJG92278.1;Name=WJG92278.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=PUW35_17015;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WJG92278.1;transl_table=11 CP118132.1 Genbank gene 3497869 3498891 . - . ID=gene-PUW35_17020;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=PUW35_17020 CP118132.1 Protein Homology CDS 3497869 3498891 . - 0 ID=cds-WJG92279.1;Parent=gene-PUW35_17020;Dbxref=NCBI_GP:WJG92279.1;Name=WJG92279.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=PUW35_17020;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WJG92279.1;transl_table=11 CP118132.1 Genbank gene 3498920 3499921 . - . ID=gene-PUW35_17025;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=PUW35_17025 CP118132.1 Protein Homology CDS 3498920 3499921 . - 0 ID=cds-WJG92280.1;Parent=gene-PUW35_17025;Dbxref=NCBI_GP:WJG92280.1;Name=WJG92280.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=PUW35_17025;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WJG92280.1;transl_table=11 CP118132.1 Genbank pseudogene 3499918 3500960 . - . ID=gene-PUW35_17030;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=pseudogene;locus_tag=PUW35_17030;pseudo=true CP118132.1 Protein Homology CDS 3499918 3500960 . - 0 ID=cds-PUW35_17030;Parent=gene-PUW35_17030;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=PUW35_17030;product=autoinducer 2 ABC transporter permease LsrC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3500954 3502489 . - . ID=gene-PUW35_17035;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=PUW35_17035 CP118132.1 Protein Homology CDS 3500954 3502489 . - 0 ID=cds-WJG92281.1;Parent=gene-PUW35_17035;Dbxref=NCBI_GP:WJG92281.1;Name=WJG92281.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=PUW35_17035;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WJG92281.1;transl_table=11 CP118132.1 Genbank gene 3502746 3503705 . + . ID=gene-PUW35_17040;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=PUW35_17040 CP118132.1 Protein Homology CDS 3502746 3503705 . + 0 ID=cds-WJG92282.1;Parent=gene-PUW35_17040;Dbxref=NCBI_GP:WJG92282.1;Name=WJG92282.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=PUW35_17040;product=transcriptional regulator LsrR;protein_id=WJG92282.1;transl_table=11 CP118132.1 Genbank gene 3503792 3505384 . + . ID=gene-PUW35_17045;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=PUW35_17045 CP118132.1 Protein Homology CDS 3503792 3505384 . + 0 ID=cds-WJG92283.1;Parent=gene-PUW35_17045;Dbxref=NCBI_GP:WJG92283.1;Name=WJG92283.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=PUW35_17045;product=autoinducer-2 kinase;protein_id=WJG92283.1;transl_table=11 CP118132.1 Genbank gene 3505398 3505748 . + . ID=gene-PUW35_17050;Name=PUW35_17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17050 CP118132.1 Protein Homology CDS 3505398 3505748 . + 0 ID=cds-WJG92284.1;Parent=gene-PUW35_17050;Dbxref=NCBI_GP:WJG92284.1;Name=WJG92284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=PUW35_17050;product=cupin domain-containing protein;protein_id=WJG92284.1;transl_table=11 CP118132.1 Genbank pseudogene 3505838 3505978 . - . ID=gene-PUW35_17055;Name=PUW35_17055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17055;pseudo=true CP118132.1 Protein Homology CDS 3505838 3505978 . - 0 ID=cds-PUW35_17055;Parent=gene-PUW35_17055;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=PUW35_17055;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3506036 3506155 . - . ID=gene-PUW35_17060;Name=PUW35_17060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17060;pseudo=true CP118132.1 Protein Homology CDS 3506036 3506155 . - 0 ID=cds-PUW35_17060;Parent=gene-PUW35_17060;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=PUW35_17060;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3506253 3506975 . - . ID=gene-PUW35_17065;Name=PUW35_17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17065 CP118132.1 Protein Homology CDS 3506253 3506975 . - 0 ID=cds-WJG92285.1;Parent=gene-PUW35_17065;Dbxref=NCBI_GP:WJG92285.1;Name=WJG92285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=PUW35_17065;product=GntR family transcriptional regulator;protein_id=WJG92285.1;transl_table=11 CP118132.1 Genbank gene 3507038 3508078 . - . ID=gene-PUW35_17070;Name=PUW35_17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17070 CP118132.1 Protein Homology CDS 3507038 3508078 . - 0 ID=cds-WJG92286.1;Parent=gene-PUW35_17070;Dbxref=NCBI_GP:WJG92286.1;Name=WJG92286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=PUW35_17070;product=ADP-ribosylglycohydrolase family protein;protein_id=WJG92286.1;transl_table=11 CP118132.1 Genbank pseudogene 3508088 3509046 . - . ID=gene-PUW35_17075;Name=PUW35_17075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17075;pseudo=true CP118132.1 Protein Homology CDS 3508088 3509046 . - 0 ID=cds-PUW35_17075;Parent=gene-PUW35_17075;Note=frameshifted;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=PUW35_17075;product=aminoimidazole riboside kinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3509057 3510391 . - . ID=gene-PUW35_17080;Name=PUW35_17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17080 CP118132.1 Protein Homology CDS 3509057 3510391 . - 0 ID=cds-WJG92287.1;Parent=gene-PUW35_17080;Dbxref=NCBI_GP:WJG92287.1;Name=WJG92287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=PUW35_17080;product=MFS transporter;protein_id=WJG92287.1;transl_table=11 CP118132.1 Genbank gene 3510654 3511409 . - . ID=gene-PUW35_17085;Name=PUW35_17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17085 CP118132.1 Protein Homology CDS 3510654 3511409 . - 0 ID=cds-WJG92288.1;Parent=gene-PUW35_17085;Dbxref=NCBI_GP:WJG92288.1;Name=WJG92288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=PUW35_17085;product=CDP-diacylglycerol diphosphatase;protein_id=WJG92288.1;transl_table=11 CP118132.1 Genbank gene 3511510 3512499 . - . ID=gene-PUW35_17090;Name=PUW35_17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17090 CP118132.1 Protein Homology CDS 3511510 3512499 . - 0 ID=cds-WJG92289.1;Parent=gene-PUW35_17090;Dbxref=NCBI_GP:WJG92289.1;Name=WJG92289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=PUW35_17090;product=sulfate ABC transporter substrate-binding protein;protein_id=WJG92289.1;transl_table=11 CP118132.1 Genbank gene 3512703 3513665 . - . ID=gene-PUW35_17095;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=PUW35_17095 CP118132.1 Protein Homology CDS 3512703 3513665 . - 0 ID=cds-WJG92290.1;Parent=gene-PUW35_17095;Dbxref=NCBI_GP:WJG92290.1;Name=WJG92290.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=PUW35_17095;product=6-phosphofructokinase;protein_id=WJG92290.1;transl_table=11 CP118132.1 Genbank gene 3513850 3514752 . - . ID=gene-PUW35_17100;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=PUW35_17100 CP118132.1 Protein Homology CDS 3513850 3514752 . - 0 ID=cds-WJG92291.1;Parent=gene-PUW35_17100;Dbxref=NCBI_GP:WJG92291.1;Name=WJG92291.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=PUW35_17100;product=CDF family cation-efflux transporter FieF;protein_id=WJG92291.1;transl_table=11 CP118132.1 Genbank gene 3514899 3515399 . - . ID=gene-PUW35_17105;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=PUW35_17105 CP118132.1 Protein Homology CDS 3514899 3515399 . - 0 ID=cds-WJG92292.1;Parent=gene-PUW35_17105;Dbxref=NCBI_GP:WJG92292.1;Name=WJG92292.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=PUW35_17105;product=cell-envelope stress modulator CpxP;protein_id=WJG92292.1;transl_table=11 CP118132.1 Genbank gene 3515550 3516248 . + . ID=gene-PUW35_17110;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=PUW35_17110 CP118132.1 Protein Homology CDS 3515550 3516248 . + 0 ID=cds-WJG92293.1;Parent=gene-PUW35_17110;Dbxref=NCBI_GP:WJG92293.1;Name=WJG92293.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=PUW35_17110;product=envelope stress response regulator transcription factor CpxR;protein_id=WJG92293.1;transl_table=11 CP118132.1 Genbank gene 3516245 3517618 . + . ID=gene-PUW35_17115;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=PUW35_17115 CP118132.1 Protein Homology CDS 3516245 3517618 . + 0 ID=cds-WJG92294.1;Parent=gene-PUW35_17115;Dbxref=NCBI_GP:WJG92294.1;Name=WJG92294.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=PUW35_17115;product=envelope stress sensor histidine kinase CpxA;protein_id=WJG92294.1;transl_table=11 CP118132.1 Genbank gene 3517666 3517869 . - . ID=gene-PUW35_17120;Name=PUW35_17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17120 CP118132.1 Protein Homology CDS 3517666 3517869 . - 0 ID=cds-WJG92295.1;Parent=gene-PUW35_17120;Dbxref=NCBI_GP:WJG92295.1;Name=WJG92295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=PUW35_17120;product=hypothetical protein;protein_id=WJG92295.1;transl_table=11 CP118132.1 Genbank gene 3517990 3518385 . - . ID=gene-PUW35_17125;Name=PUW35_17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17125 CP118132.1 Protein Homology CDS 3517990 3518385 . - 0 ID=cds-WJG92296.1;Parent=gene-PUW35_17125;Dbxref=NCBI_GP:WJG92296.1;Name=WJG92296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=PUW35_17125;product=nuclear transport factor 2 family protein;protein_id=WJG92296.1;transl_table=11 CP118132.1 Genbank pseudogene 3518397 3519086 . - . ID=gene-PUW35_17130;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=pseudogene;locus_tag=PUW35_17130;pseudo=true CP118132.1 Protein Homology CDS 3518397 3519086 . - 0 ID=cds-PUW35_17130;Parent=gene-PUW35_17130;Note=internal stop;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=PUW35_17130;product=6-hydroxyaminopurine reductase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3519156 3519774 . - . ID=gene-PUW35_17135;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=pseudogene;locus_tag=PUW35_17135;pseudo=true CP118132.1 Protein Homology CDS 3519156 3519774 . - 0 ID=cds-PUW35_17135;Parent=gene-PUW35_17135;Note=frameshifted;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=PUW35_17135;product=superoxide dismutase [Mn];pseudo=true;transl_table=11 CP118132.1 Genbank gene 3520103 3521086 . + . ID=gene-PUW35_17140;Name=PUW35_17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17140 CP118132.1 Protein Homology CDS 3520103 3521086 . + 0 ID=cds-WJG92297.1;Parent=gene-PUW35_17140;Dbxref=NCBI_GP:WJG92297.1;Name=WJG92297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=PUW35_17140;product=TRAP transporter substrate-binding protein;protein_id=WJG92297.1;transl_table=11 CP118132.1 Genbank gene 3521105 3521620 . + . ID=gene-PUW35_17145;Name=PUW35_17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17145 CP118132.1 Protein Homology CDS 3521105 3521620 . + 0 ID=cds-WJG92298.1;Parent=gene-PUW35_17145;Dbxref=NCBI_GP:WJG92298.1;Name=WJG92298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=PUW35_17145;product=TRAP transporter small permease;protein_id=WJG92298.1;transl_table=11 CP118132.1 Genbank gene 3521613 3522920 . + . ID=gene-PUW35_17150;Name=PUW35_17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17150 CP118132.1 Protein Homology CDS 3521613 3522920 . + 0 ID=cds-WJG92299.1;Parent=gene-PUW35_17150;Dbxref=NCBI_GP:WJG92299.1;Name=WJG92299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=PUW35_17150;product=TRAP transporter large permease;protein_id=WJG92299.1;transl_table=11 CP118132.1 Genbank gene 3523078 3523761 . - . ID=gene-PUW35_17155;Name=PUW35_17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17155 CP118132.1 Protein Homology CDS 3523078 3523761 . - 0 ID=cds-WJG92300.1;Parent=gene-PUW35_17155;Dbxref=NCBI_GP:WJG92300.1;Name=WJG92300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=PUW35_17155;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WJG92300.1;transl_table=11 CP118132.1 Genbank gene 3524380 3525414 . + . ID=gene-PUW35_17160;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=PUW35_17160 CP118132.1 Protein Homology CDS 3524380 3525414 . + 0 ID=cds-WJG92301.1;Parent=gene-PUW35_17160;Dbxref=NCBI_GP:WJG92301.1;Name=WJG92301.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=PUW35_17160;product=L-rhamnose/proton symporter RhaT;protein_id=WJG92301.1;transl_table=11 CP118132.1 Genbank pseudogene 3525411 3526258 . - . ID=gene-PUW35_17165;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=pseudogene;locus_tag=PUW35_17165;pseudo=true CP118132.1 Protein Homology CDS 3525411 3526258 . - 0 ID=cds-PUW35_17165;Parent=gene-PUW35_17165;Note=frameshifted;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=PUW35_17165;product=HTH-type transcriptional activator RhaR;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3526411 3527247 . - . ID=gene-PUW35_17170;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=PUW35_17170 CP118132.1 Protein Homology CDS 3526411 3527247 . - 0 ID=cds-WJG92302.1;Parent=gene-PUW35_17170;Dbxref=NCBI_GP:WJG92302.1;Name=WJG92302.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=PUW35_17170;product=HTH-type transcriptional activator RhaS;protein_id=WJG92302.1;transl_table=11 CP118132.1 Genbank gene 3527535 3529004 . + . ID=gene-PUW35_17175;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=PUW35_17175 CP118132.1 Protein Homology CDS 3527535 3529004 . + 0 ID=cds-WJG92303.1;Parent=gene-PUW35_17175;Dbxref=NCBI_GP:WJG92303.1;Name=WJG92303.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=PUW35_17175;product=rhamnulokinase;protein_id=WJG92303.1;transl_table=11 CP118132.1 Genbank gene 3529001 3530260 . + . ID=gene-PUW35_17180;Name=PUW35_17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17180 CP118132.1 Protein Homology CDS 3529001 3530260 . + 0 ID=cds-WJG92304.1;Parent=gene-PUW35_17180;Dbxref=NCBI_GP:WJG92304.1;Name=WJG92304.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=PUW35_17180;product=L-rhamnose isomerase;protein_id=WJG92304.1;transl_table=11 CP118132.1 Genbank gene 3530403 3531230 . + . ID=gene-PUW35_17185;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=PUW35_17185 CP118132.1 Protein Homology CDS 3530403 3531230 . + 0 ID=cds-WJG92305.1;Parent=gene-PUW35_17185;Dbxref=NCBI_GP:WJG92305.1;Name=WJG92305.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=PUW35_17185;product=rhamnulose-1-phosphate aldolase;protein_id=WJG92305.1;transl_table=11 CP118132.1 Genbank pseudogene 3531417 3532504 . + . ID=gene-PUW35_17190;Name=PUW35_17190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17190;pseudo=true CP118132.1 Protein Homology CDS 3531417 3532504 . + 0 ID=cds-PUW35_17190;Parent=gene-PUW35_17190;Note=frameshifted;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012678.2;locus_tag=PUW35_17190;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3532501 3532815 . + . ID=gene-PUW35_17195;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=PUW35_17195 CP118132.1 Protein Homology CDS 3532501 3532815 . + 0 ID=cds-WJG92306.1;Parent=gene-PUW35_17195;Dbxref=NCBI_GP:WJG92306.1;Name=WJG92306.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=PUW35_17195;product=L-rhamnose mutarotase;protein_id=WJG92306.1;transl_table=11 CP118132.1 Genbank gene 3532904 3533452 . - . ID=gene-PUW35_17200;Name=PUW35_17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17200 CP118132.1 Protein Homology CDS 3532904 3533452 . - 0 ID=cds-WJG92307.1;Parent=gene-PUW35_17200;Dbxref=NCBI_GP:WJG92307.1;Name=WJG92307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=PUW35_17200;product=helix-turn-helix domain-containing protein;protein_id=WJG92307.1;transl_table=11 CP118132.1 Genbank gene 3533553 3534212 . + . ID=gene-PUW35_17205;Name=PUW35_17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17205 CP118132.1 Protein Homology CDS 3533553 3534212 . + 0 ID=cds-WJG92308.1;Parent=gene-PUW35_17205;Dbxref=NCBI_GP:WJG92308.1;Name=WJG92308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=PUW35_17205;product=AzlC family ABC transporter permease;protein_id=WJG92308.1;transl_table=11 CP118132.1 Genbank gene 3534212 3534535 . + . ID=gene-PUW35_17210;Name=PUW35_17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17210 CP118132.1 Protein Homology CDS 3534212 3534535 . + 0 ID=cds-WJG92309.1;Parent=gene-PUW35_17210;Dbxref=NCBI_GP:WJG92309.1;Name=WJG92309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=PUW35_17210;product=AzlD domain-containing protein;protein_id=WJG92309.1;transl_table=11 CP118132.1 Genbank gene 3534891 3535958 . - . ID=gene-PUW35_17215;Name=PUW35_17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17215 CP118132.1 Protein Homology CDS 3534891 3535958 . - 0 ID=cds-WJG92310.1;Parent=gene-PUW35_17215;Dbxref=NCBI_GP:WJG92310.1;Name=WJG92310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=PUW35_17215;product=DUF3829 domain-containing protein;protein_id=WJG92310.1;transl_table=11 CP118132.1 Genbank pseudogene 3536140 3537160 . + . ID=gene-PUW35_17220;Name=PUW35_17220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17220;pseudo=true CP118132.1 Protein Homology CDS 3536140 3537160 . + 0 ID=cds-PUW35_17220;Parent=gene-PUW35_17220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=PUW35_17220;product=YiiG family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3537428 3538264 . - . ID=gene-PUW35_17225;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=PUW35_17225 CP118132.1 Protein Homology CDS 3537428 3538264 . - 0 ID=cds-WJG92311.1;Parent=gene-PUW35_17225;Dbxref=NCBI_GP:WJG92311.1;Name=WJG92311.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=PUW35_17225;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WJG92311.1;transl_table=11 CP118132.1 Genbank gene 3538459 3541509 . + . ID=gene-PUW35_17230;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PUW35_17230 CP118132.1 Protein Homology CDS 3538459 3541509 . + 0 ID=cds-WJG92312.1;Parent=gene-PUW35_17230;Dbxref=NCBI_GP:WJG92312.1;Name=WJG92312.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=PUW35_17230;product=formate dehydrogenase-N subunit alpha;protein_id=WJG92312.1;transl_except=(pos:3539044..3539046%2Caa:Sec);transl_table=11 CP118132.1 Genbank gene 3541522 3542424 . + . ID=gene-PUW35_17235;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PUW35_17235 CP118132.1 Protein Homology CDS 3541522 3542424 . + 0 ID=cds-WJG92313.1;Parent=gene-PUW35_17235;Dbxref=NCBI_GP:WJG92313.1;Name=WJG92313.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=PUW35_17235;product=formate dehydrogenase subunit beta;protein_id=WJG92313.1;transl_table=11 CP118132.1 Genbank gene 3542421 3543056 . + . ID=gene-PUW35_17240;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=PUW35_17240 CP118132.1 Protein Homology CDS 3542421 3543056 . + 0 ID=cds-WJG92314.1;Parent=gene-PUW35_17240;Dbxref=NCBI_GP:WJG92314.1;Name=WJG92314.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=PUW35_17240;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WJG92314.1;transl_table=11 CP118132.1 Genbank gene 3543053 3543982 . + . ID=gene-PUW35_17245;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=PUW35_17245 CP118132.1 Protein Homology CDS 3543053 3543982 . + 0 ID=cds-WJG92315.1;Parent=gene-PUW35_17245;Dbxref=NCBI_GP:WJG92315.1;Name=WJG92315.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=PUW35_17245;product=formate dehydrogenase accessory protein FdhE;protein_id=WJG92315.1;transl_table=11 CP118132.1 Genbank gene 3544029 3544319 . - . ID=gene-PUW35_17250;Name=PUW35_17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17250 CP118132.1 Protein Homology CDS 3544029 3544319 . - 0 ID=cds-WJG92316.1;Parent=gene-PUW35_17250;Dbxref=NCBI_GP:WJG92316.1;Name=WJG92316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=PUW35_17250;product=DNA-binding transcriptional regulator;protein_id=WJG92316.1;transl_table=11 CP118132.1 Genbank gene 3544320 3544631 . - . ID=gene-PUW35_17255;Name=PUW35_17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17255 CP118132.1 Protein Homology CDS 3544320 3544631 . - 0 ID=cds-WJG92317.1;Parent=gene-PUW35_17255;Dbxref=NCBI_GP:WJG92317.1;Name=WJG92317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=PUW35_17255;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG92317.1;transl_table=11 CP118132.1 Genbank gene 3544849 3545778 . + . ID=gene-PUW35_17260;Name=PUW35_17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17260 CP118132.1 Protein Homology CDS 3544849 3545778 . + 0 ID=cds-WJG92318.1;Parent=gene-PUW35_17260;Dbxref=NCBI_GP:WJG92318.1;Name=WJG92318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=PUW35_17260;product=alpha/beta hydrolase;protein_id=WJG92318.1;transl_table=11 CP118132.1 Genbank gene 3545864 3546175 . + . ID=gene-PUW35_17265;Name=PUW35_17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17265 CP118132.1 Protein Homology CDS 3545864 3546175 . + 0 ID=cds-WJG92319.1;Parent=gene-PUW35_17265;Dbxref=NCBI_GP:WJG92319.1;Name=WJG92319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=PUW35_17265;product=type II toxin-antitoxin system HigB family toxin;protein_id=WJG92319.1;transl_table=11 CP118132.1 Genbank gene 3546172 3546618 . + . ID=gene-PUW35_17270;Name=PUW35_17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17270 CP118132.1 Protein Homology CDS 3546172 3546618 . + 0 ID=cds-WJG92320.1;Parent=gene-PUW35_17270;Dbxref=NCBI_GP:WJG92320.1;Name=WJG92320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=PUW35_17270;product=type II toxin-antitoxin system HigA family antitoxin;protein_id=WJG92320.1;transl_table=11 CP118132.1 Genbank gene 3546633 3547574 . - . ID=gene-PUW35_17275;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=PUW35_17275 CP118132.1 Protein Homology CDS 3546633 3547574 . - 0 ID=cds-WJG92321.1;Parent=gene-PUW35_17275;Dbxref=NCBI_GP:WJG92321.1;Name=WJG92321.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=PUW35_17275;product=fatty acid biosynthesis protein FabY;protein_id=WJG92321.1;transl_table=11 CP118132.1 Genbank gene 3547619 3548056 . - . ID=gene-PUW35_17280;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=PUW35_17280 CP118132.1 Protein Homology CDS 3547619 3548056 . - 0 ID=cds-WJG92322.1;Parent=gene-PUW35_17280;Dbxref=NCBI_GP:WJG92322.1;Name=WJG92322.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=PUW35_17280;product=D-aminoacyl-tRNA deacylase;protein_id=WJG92322.1;transl_table=11 CP118132.1 Genbank pseudogene 3548053 3548911 . - . ID=gene-PUW35_17285;Name=PUW35_17285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17285;pseudo=true CP118132.1 Protein Homology CDS 3548053 3548911 . - 0 ID=cds-PUW35_17285;Parent=gene-PUW35_17285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=PUW35_17285;product=virulence factor BrkB family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3548905 3549504 . - . ID=gene-PUW35_17290;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=PUW35_17290 CP118132.1 Protein Homology CDS 3548905 3549504 . - 0 ID=cds-WJG92323.1;Parent=gene-PUW35_17290;Dbxref=NCBI_GP:WJG92323.1;Name=WJG92323.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=PUW35_17290;product=glucose-1-phosphatase;protein_id=WJG92323.1;transl_table=11 CP118132.1 Genbank gene 3549695 3550498 . - . ID=gene-PUW35_17295;Name=PUW35_17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17295 CP118132.1 Protein Homology CDS 3549695 3550498 . - 0 ID=cds-WJG92324.1;Parent=gene-PUW35_17295;Dbxref=NCBI_GP:WJG92324.1;Name=WJG92324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=PUW35_17295;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJG92324.1;transl_table=11 CP118132.1 Genbank pseudogene 3550532 3551428 . - . ID=gene-PUW35_17300;Name=PUW35_17300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17300;pseudo=true CP118132.1 Protein Homology CDS 3550532 3551428 . - 0 ID=cds-PUW35_17300;Parent=gene-PUW35_17300;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=PUW35_17300;product=sugar kinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3551593 3552489 . + . ID=gene-PUW35_17305;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=PUW35_17305 CP118132.1 Protein Homology CDS 3551593 3552489 . + 0 ID=cds-WJG92325.1;Parent=gene-PUW35_17305;Dbxref=NCBI_GP:WJG92325.1;Name=WJG92325.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=PUW35_17305;product=sulfolactaldehyde 3-reductase;protein_id=WJG92325.1;transl_table=11 CP118132.1 Genbank gene 3552512 3553390 . + . ID=gene-PUW35_17310;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=PUW35_17310 CP118132.1 Protein Homology CDS 3552512 3553390 . + 0 ID=cds-WJG92326.1;Parent=gene-PUW35_17310;Dbxref=NCBI_GP:WJG92326.1;Name=WJG92326.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=PUW35_17310;product=sulfofructosephosphate aldolase;protein_id=WJG92326.1;transl_table=11 CP118132.1 Genbank gene 3553406 3554647 . + . ID=gene-PUW35_17315;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=PUW35_17315 CP118132.1 Protein Homology CDS 3553406 3554647 . + 0 ID=cds-WJG92327.1;Parent=gene-PUW35_17315;Dbxref=NCBI_GP:WJG92327.1;Name=WJG92327.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=PUW35_17315;product=sulfoquinovose isomerase;protein_id=WJG92327.1;transl_table=11 CP118132.1 Genbank gene 3554651 3555508 . + . ID=gene-PUW35_17320;Name=PUW35_17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17320 CP118132.1 Protein Homology CDS 3554651 3555508 . + 0 ID=cds-WJG92328.1;Parent=gene-PUW35_17320;Dbxref=NCBI_GP:WJG92328.1;Name=WJG92328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=PUW35_17320;product=aldose-1-epimerase;protein_id=WJG92328.1;transl_table=11 CP118132.1 Genbank gene 3555552 3557588 . + . ID=gene-PUW35_17325;Name=PUW35_17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17325 CP118132.1 Protein Homology CDS 3555552 3557588 . + 0 ID=cds-WJG92329.1;Parent=gene-PUW35_17325;Dbxref=NCBI_GP:WJG92329.1;Name=WJG92329.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=PUW35_17325;product=alpha-glucosidase;protein_id=WJG92329.1;transl_table=11 CP118132.1 Genbank gene 3557634 3559016 . + . ID=gene-PUW35_17330;Name=PUW35_17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17330 CP118132.1 Protein Homology CDS 3557634 3559016 . + 0 ID=cds-WJG92330.1;Parent=gene-PUW35_17330;Dbxref=NCBI_GP:WJG92330.1;Name=WJG92330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=PUW35_17330;product=MFS transporter;protein_id=WJG92330.1;transl_table=11 CP118132.1 Genbank gene 3559062 3560483 . + . ID=gene-PUW35_17335;Name=PUW35_17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17335 CP118132.1 Protein Homology CDS 3559062 3560483 . + 0 ID=cds-WJG92331.1;Parent=gene-PUW35_17335;Dbxref=NCBI_GP:WJG92331.1;Name=WJG92331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=PUW35_17335;product=MFS transporter;protein_id=WJG92331.1;transl_table=11 CP118132.1 Genbank gene 3560551 3561243 . + . ID=gene-PUW35_17340;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=PUW35_17340 CP118132.1 Protein Homology CDS 3560551 3561243 . + 0 ID=cds-WJG92332.1;Parent=gene-PUW35_17340;Dbxref=NCBI_GP:WJG92332.1;Name=WJG92332.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=PUW35_17340;product=porin OmpL;protein_id=WJG92332.1;transl_table=11 CP118132.1 Genbank gene 3561400 3562248 . + . ID=gene-PUW35_17345;Name=PUW35_17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17345 CP118132.1 Protein Homology CDS 3561400 3562248 . + 0 ID=cds-WJG92333.1;Parent=gene-PUW35_17345;Dbxref=NCBI_GP:WJG92333.1;Name=WJG92333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=PUW35_17345;product=STM4015 family protein;protein_id=WJG92333.1;transl_table=11 CP118132.1 Genbank gene 3562261 3563286 . + . ID=gene-PUW35_17350;Name=PUW35_17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17350 CP118132.1 Protein Homology CDS 3562261 3563286 . + 0 ID=cds-WJG92334.1;Parent=gene-PUW35_17350;Dbxref=NCBI_GP:WJG92334.1;Name=WJG92334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=PUW35_17350;product=STM4014 family protein;protein_id=WJG92334.1;transl_table=11 CP118132.1 Genbank gene 3563279 3564154 . + . ID=gene-PUW35_17355;Name=PUW35_17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17355 CP118132.1 Protein Homology CDS 3563279 3564154 . + 0 ID=cds-WJG92335.1;Parent=gene-PUW35_17355;Dbxref=NCBI_GP:WJG92335.1;Name=WJG92335.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=PUW35_17355;product=STM4013/SEN3800 family hydrolase;protein_id=WJG92335.1;transl_table=11 CP118132.1 Genbank gene 3564156 3565397 . + . ID=gene-PUW35_17360;Name=PUW35_17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17360 CP118132.1 Protein Homology CDS 3564156 3565397 . + 0 ID=cds-WJG92336.1;Parent=gene-PUW35_17360;Dbxref=NCBI_GP:WJG92336.1;Name=WJG92336.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=PUW35_17360;product=STM4012 family radical SAM protein;protein_id=WJG92336.1;transl_table=11 CP118132.1 Genbank gene 3565394 3566272 . + . ID=gene-PUW35_17365;Name=PUW35_17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17365 CP118132.1 Protein Homology CDS 3565394 3566272 . + 0 ID=cds-WJG92337.1;Parent=gene-PUW35_17365;Dbxref=NCBI_GP:WJG92337.1;Name=WJG92337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=PUW35_17365;product=STM4011 family radical SAM protein;protein_id=WJG92337.1;transl_table=11 CP118132.1 Genbank gene 3566257 3566991 . + . ID=gene-PUW35_17370;Name=PUW35_17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17370 CP118132.1 Protein Homology CDS 3566257 3566991 . + 0 ID=cds-WJG92338.1;Parent=gene-PUW35_17370;Dbxref=NCBI_GP:WJG92338.1;Name=WJG92338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=PUW35_17370;product=Cof-type HAD-IIB family hydrolase;protein_id=WJG92338.1;transl_table=11 CP118132.1 Genbank pseudogene 3567046 3568867 . - . ID=gene-PUW35_17375;Name=typA;gbkey=Gene;gene=typA;gene_biotype=pseudogene;locus_tag=PUW35_17375;pseudo=true CP118132.1 Protein Homology CDS 3567046 3568867 . - 0 ID=cds-PUW35_17375;Parent=gene-PUW35_17375;Note=frameshifted;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=PUW35_17375;product=ribosome-dependent GTPase TypA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3569243 3570652 . + . ID=gene-PUW35_17380;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=PUW35_17380 CP118132.1 Protein Homology CDS 3569243 3570652 . + 0 ID=cds-WJG92339.1;Parent=gene-PUW35_17380;Dbxref=NCBI_GP:WJG92339.1;Name=WJG92339.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=PUW35_17380;product=glutamate--ammonia ligase;protein_id=WJG92339.1;transl_table=11 CP118132.1 Genbank gene 3570927 3571976 . + . ID=gene-PUW35_17385;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=PUW35_17385 CP118132.1 Protein Homology CDS 3570927 3571976 . + 0 ID=cds-WJG92340.1;Parent=gene-PUW35_17385;Dbxref=NCBI_GP:WJG92340.1;Name=WJG92340.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=PUW35_17385;product=nitrogen regulation protein NR(II);protein_id=WJG92340.1;transl_table=11 CP118132.1 Genbank gene 3571985 3573394 . + . ID=gene-PUW35_17390;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=PUW35_17390 CP118132.1 Protein Homology CDS 3571985 3573394 . + 0 ID=cds-WJG92341.1;Parent=gene-PUW35_17390;Dbxref=NCBI_GP:WJG92341.1;Name=WJG92341.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=PUW35_17390;product=nitrogen regulation protein NR(I);protein_id=WJG92341.1;transl_table=11 CP118132.1 Genbank gene 3573507 3573617 . + . ID=gene-PUW35_17395;Name=PUW35_17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17395 CP118132.1 Protein Homology CDS 3573507 3573617 . + 0 ID=cds-WJG92342.1;Parent=gene-PUW35_17395;Dbxref=NCBI_GP:WJG92342.1;Name=WJG92342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=PUW35_17395;product=YshB family small membrane protein;protein_id=WJG92342.1;transl_table=11 CP118132.1 Genbank gene 3573707 3575080 . - . ID=gene-PUW35_17400;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=PUW35_17400 CP118132.1 Protein Homology CDS 3573707 3575080 . - 0 ID=cds-WJG95133.1;Parent=gene-PUW35_17400;Dbxref=NCBI_GP:WJG95133.1;Name=WJG95133.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=PUW35_17400;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WJG95133.1;transl_table=11 CP118132.1 Genbank pseudogene 3575269 3575760 . - . ID=gene-PUW35_17405;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=pseudogene;locus_tag=PUW35_17405;pseudo=true CP118132.1 Protein Homology CDS 3575269 3575760 . - 0 ID=cds-PUW35_17405;Parent=gene-PUW35_17405;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121849.1;locus_tag=PUW35_17405;product=Der GTPase-activating protein YihI;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3575884 3576108 . - . ID=gene-PUW35_17410;Name=PUW35_17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17410 CP118132.1 Protein Homology CDS 3575884 3576108 . - 0 ID=cds-WJG92343.1;Parent=gene-PUW35_17410;Dbxref=NCBI_GP:WJG92343.1;Name=WJG92343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=PUW35_17410;product=hypothetical protein;protein_id=WJG92343.1;transl_table=11 CP118132.1 Genbank gene 3576348 3576980 . + . ID=gene-PUW35_17415;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=PUW35_17415 CP118132.1 Protein Homology CDS 3576348 3576980 . + 0 ID=cds-WJG92344.1;Parent=gene-PUW35_17415;Dbxref=NCBI_GP:WJG92344.1;Name=WJG92344.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=PUW35_17415;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WJG92344.1;transl_table=11 CP118132.1 Genbank pseudogene 3577315 3580099 . - . ID=gene-PUW35_17420;Name=polA;gbkey=Gene;gene=polA;gene_biotype=pseudogene;locus_tag=PUW35_17420;pseudo=true CP118132.1 Protein Homology CDS 3577315 3580099 . - 0 ID=cds-PUW35_17420;Parent=gene-PUW35_17420;Note=frameshifted;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=PUW35_17420;product=DNA polymerase I;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3580487 3581395 . + . ID=gene-PUW35_17425;Name=PUW35_17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17425 CP118132.1 Protein Homology CDS 3580487 3581395 . + 0 ID=cds-WJG92345.1;Parent=gene-PUW35_17425;Dbxref=NCBI_GP:WJG92345.1;Name=WJG92345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=PUW35_17425;product=acyltransferase;protein_id=WJG92345.1;transl_table=11 CP118132.1 Genbank gene 3581408 3582031 . - . ID=gene-PUW35_17430;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=PUW35_17430 CP118132.1 Protein Homology CDS 3581408 3582031 . - 0 ID=cds-WJG92346.1;Parent=gene-PUW35_17430;Dbxref=NCBI_GP:WJG92346.1;Name=WJG92346.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=PUW35_17430;product=thiol:disulfide interchange protein DsbA;protein_id=WJG92346.1;transl_table=11 CP118132.1 Genbank gene 3582048 3583034 . - . ID=gene-PUW35_17435;Name=PUW35_17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17435 CP118132.1 Protein Homology CDS 3582048 3583034 . - 0 ID=cds-WJG92347.1;Parent=gene-PUW35_17435;Dbxref=NCBI_GP:WJG92347.1;Name=WJG92347.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=PUW35_17435;product=serine/threonine protein kinase;protein_id=WJG92347.1;transl_table=11 CP118132.1 Genbank gene 3583111 3583380 . - . ID=gene-PUW35_17440;Name=PUW35_17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17440 CP118132.1 Protein Homology CDS 3583111 3583380 . - 0 ID=cds-WJG92348.1;Parent=gene-PUW35_17440;Dbxref=NCBI_GP:WJG92348.1;Name=WJG92348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=PUW35_17440;product=YihD family protein;protein_id=WJG92348.1;transl_table=11 CP118132.1 Genbank gene 3583450 3584034 . + . ID=gene-PUW35_17445;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=PUW35_17445 CP118132.1 Protein Homology CDS 3583450 3584034 . + 0 ID=cds-WJG92349.1;Parent=gene-PUW35_17445;Dbxref=NCBI_GP:WJG92349.1;Name=WJG92349.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=PUW35_17445;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WJG92349.1;transl_table=11 CP118132.1 Genbank gene 3584031 3584546 . + . ID=gene-PUW35_17450;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=PUW35_17450 CP118132.1 Protein Homology CDS 3584031 3584546 . + 0 ID=cds-WJG95134.1;Parent=gene-PUW35_17450;Dbxref=NCBI_GP:WJG95134.1;Name=WJG95134.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=PUW35_17450;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WJG95134.1;transl_table=11 CP118132.1 Genbank gene 3584818 3584933 . - . ID=gene-PUW35_17455;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW35_17455 CP118132.1 cmsearch rRNA 3584818 3584933 . - . ID=rna-PUW35_17455;Parent=gene-PUW35_17455;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17455;product=5S ribosomal RNA CP118132.1 cmsearch exon 3584818 3584933 . - . ID=exon-PUW35_17455-1;Parent=rna-PUW35_17455;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17455;product=5S ribosomal RNA CP118132.1 Genbank gene 3585130 3588118 . - . ID=gene-PUW35_17460;Name=PUW35_17460;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_17460 CP118132.1 cmsearch rRNA 3585130 3588118 . - . ID=rna-PUW35_17460;Parent=gene-PUW35_17460;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17460;product=23S ribosomal RNA CP118132.1 cmsearch exon 3585130 3588118 . - . ID=exon-PUW35_17460-1;Parent=rna-PUW35_17460;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17460;product=23S ribosomal RNA CP118132.1 Genbank gene 3588312 3588387 . - . ID=gene-PUW35_17465;Name=PUW35_17465;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17465 CP118132.1 tRNAscan-SE tRNA 3588312 3588387 . - . ID=rna-PUW35_17465;Parent=gene-PUW35_17465;anticodon=(pos:complement(3588351..3588353));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17465;product=tRNA-Glu CP118132.1 tRNAscan-SE exon 3588312 3588387 . - . ID=exon-PUW35_17465-1;Parent=rna-PUW35_17465;anticodon=(pos:complement(3588351..3588353));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17465;product=tRNA-Glu CP118132.1 Genbank gene 3588473 3590014 . - . ID=gene-PUW35_17470;Name=PUW35_17470;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_17470 CP118132.1 cmsearch rRNA 3588473 3590014 . - . ID=rna-PUW35_17470;Parent=gene-PUW35_17470;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17470;product=16S ribosomal RNA CP118132.1 cmsearch exon 3588473 3590014 . - . ID=exon-PUW35_17470-1;Parent=rna-PUW35_17470;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17470;product=16S ribosomal RNA CP118132.1 Genbank gene 3590637 3592226 . + . ID=gene-PUW35_17475;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=PUW35_17475 CP118132.1 Protein Homology CDS 3590637 3592226 . + 0 ID=cds-WJG92350.1;Parent=gene-PUW35_17475;Dbxref=NCBI_GP:WJG92350.1;Name=WJG92350.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=PUW35_17475;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WJG92350.1;transl_table=11 CP118132.1 Genbank gene 3592238 3593527 . + . ID=gene-PUW35_17480;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=PUW35_17480 CP118132.1 Protein Homology CDS 3592238 3593527 . + 0 ID=cds-WJG92351.1;Parent=gene-PUW35_17480;Dbxref=NCBI_GP:WJG92351.1;Name=WJG92351.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=PUW35_17480;product=phosphoribosylamine--glycine ligase;protein_id=WJG92351.1;transl_table=11 CP118132.1 Genbank gene 3593524 3594849 . - . ID=gene-PUW35_17485;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=PUW35_17485 CP118132.1 Protein Homology CDS 3593524 3594849 . - 0 ID=cds-WJG92352.1;Parent=gene-PUW35_17485;Dbxref=NCBI_GP:WJG92352.1;Name=WJG92352.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=PUW35_17485;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WJG92352.1;transl_table=11 CP118132.1 Genbank gene 3594855 3596252 . - . ID=gene-PUW35_17490;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=PUW35_17490 CP118132.1 Protein Homology CDS 3594855 3596252 . - 0 ID=cds-WJG92353.1;Parent=gene-PUW35_17490;Dbxref=NCBI_GP:WJG92353.1;Name=WJG92353.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=PUW35_17490;product=two-component system sensor histidine kinase ZraS;protein_id=WJG92353.1;transl_table=11 CP118132.1 Genbank gene 3596506 3596961 . + . ID=gene-PUW35_17495;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=PUW35_17495 CP118132.1 Protein Homology CDS 3596506 3596961 . + 0 ID=cds-WJG92354.1;Parent=gene-PUW35_17495;Dbxref=NCBI_GP:WJG92354.1;Name=WJG92354.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=PUW35_17495;product=zinc resistance sensor/chaperone ZraP;protein_id=WJG92354.1;transl_table=11 CP118132.1 Genbank gene 3597003 3597695 . - . ID=gene-PUW35_17500;Name=PUW35_17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17500 CP118132.1 Protein Homology CDS 3597003 3597695 . - 0 ID=cds-WJG92355.1;Parent=gene-PUW35_17500;Dbxref=NCBI_GP:WJG92355.1;Name=WJG92355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=PUW35_17500;product=DUF1481 domain-containing protein;protein_id=WJG92355.1;transl_table=11 CP118132.1 Genbank gene 3597707 3597979 . - . ID=gene-PUW35_17505;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=PUW35_17505 CP118132.1 Protein Homology CDS 3597707 3597979 . - 0 ID=cds-WJG92356.1;Parent=gene-PUW35_17505;Dbxref=NCBI_GP:WJG92356.1;Name=WJG92356.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=PUW35_17505;product=DNA-binding protein HU-alpha;protein_id=WJG92356.1;transl_table=11 CP118132.1 Genbank gene 3598166 3598756 . - . ID=gene-PUW35_17510;Name=PUW35_17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17510 CP118132.1 Protein Homology CDS 3598166 3598756 . - 0 ID=cds-WJG92357.1;Parent=gene-PUW35_17510;Dbxref=NCBI_GP:WJG92357.1;Name=WJG92357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=PUW35_17510;product=YjaG family protein;protein_id=WJG92357.1;transl_table=11 CP118132.1 Genbank gene 3598798 3599469 . - . ID=gene-PUW35_17515;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=PUW35_17515 CP118132.1 Protein Homology CDS 3598798 3599469 . - 0 ID=cds-WJG92358.1;Parent=gene-PUW35_17515;Dbxref=NCBI_GP:WJG92358.1;Name=WJG92358.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=PUW35_17515;product=deoxyribonuclease V;protein_id=WJG92358.1;transl_table=11 CP118132.1 Genbank gene 3599479 3600543 . - . ID=gene-PUW35_17520;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=PUW35_17520 CP118132.1 Protein Homology CDS 3599479 3600543 . - 0 ID=cds-WJG92359.1;Parent=gene-PUW35_17520;Dbxref=NCBI_GP:WJG92359.1;Name=WJG92359.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=PUW35_17520;product=uroporphyrinogen decarboxylase;protein_id=WJG92359.1;transl_table=11 CP118132.1 Genbank gene 3600584 3601357 . - . ID=gene-PUW35_17525;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=PUW35_17525 CP118132.1 Protein Homology CDS 3600584 3601357 . - 0 ID=cds-WJG92360.1;Parent=gene-PUW35_17525;Dbxref=NCBI_GP:WJG92360.1;Name=WJG92360.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=PUW35_17525;product=NAD(+) diphosphatase;protein_id=WJG92360.1;transl_table=11 CP118132.1 Genbank gene 3601450 3601938 . + . ID=gene-PUW35_17530;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=PUW35_17530 CP118132.1 Protein Homology CDS 3601450 3601938 . + 0 ID=cds-WJG92361.1;Parent=gene-PUW35_17530;Dbxref=NCBI_GP:WJG92361.1;Name=WJG92361.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=PUW35_17530;product=sigma D regulator;protein_id=WJG92361.1;transl_table=11 CP118132.1 cmsearch riboswitch 3602053 3602216 . + . ID=id-CP118132.1:3602053..3602216;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118132.1 Genbank gene 3602302 3604197 . + . ID=gene-PUW35_17535;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=PUW35_17535 CP118132.1 Protein Homology CDS 3602302 3604197 . + 0 ID=cds-WJG92362.1;Parent=gene-PUW35_17535;Dbxref=NCBI_GP:WJG92362.1;Name=WJG92362.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=PUW35_17535;product=phosphomethylpyrimidine synthase ThiC;protein_id=WJG92362.1;transl_table=11 CP118132.1 Genbank gene 3604197 3604832 . + . ID=gene-PUW35_17540;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=PUW35_17540 CP118132.1 Protein Homology CDS 3604197 3604832 . + 0 ID=cds-WJG92363.1;Parent=gene-PUW35_17540;Dbxref=NCBI_GP:WJG92363.1;Name=WJG92363.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=PUW35_17540;product=thiamine phosphate synthase;protein_id=WJG92363.1;transl_table=11 CP118132.1 Genbank gene 3604825 3605583 . + . ID=gene-PUW35_17545;Name=PUW35_17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17545 CP118132.1 Protein Homology CDS 3604825 3605583 . + 0 ID=cds-WJG92364.1;Parent=gene-PUW35_17545;Dbxref=NCBI_GP:WJG92364.1;Name=WJG92364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=PUW35_17545;product=HesA/MoeB/ThiF family protein;protein_id=WJG92364.1;transl_table=11 CP118132.1 Genbank gene 3605564 3605764 . + . ID=gene-PUW35_17550;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=PUW35_17550 CP118132.1 Protein Homology CDS 3605564 3605764 . + 0 ID=cds-WJG92365.1;Parent=gene-PUW35_17550;Dbxref=NCBI_GP:WJG92365.1;Name=WJG92365.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=PUW35_17550;product=sulfur carrier protein ThiS;protein_id=WJG92365.1;transl_table=11 CP118132.1 Genbank gene 3605766 3606536 . + . ID=gene-PUW35_17555;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=PUW35_17555 CP118132.1 Protein Homology CDS 3605766 3606536 . + 0 ID=cds-WJG92366.1;Parent=gene-PUW35_17555;Dbxref=NCBI_GP:WJG92366.1;Name=WJG92366.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=PUW35_17555;product=thiazole synthase;protein_id=WJG92366.1;transl_table=11 CP118132.1 Genbank gene 3606533 3607666 . + . ID=gene-PUW35_17560;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=PUW35_17560 CP118132.1 Protein Homology CDS 3606533 3607666 . + 0 ID=cds-WJG92367.1;Parent=gene-PUW35_17560;Dbxref=NCBI_GP:WJG92367.1;Name=WJG92367.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=PUW35_17560;product=2-iminoacetate synthase ThiH;protein_id=WJG92367.1;transl_table=11 CP118132.1 Genbank gene 3607817 3608005 . - . ID=gene-PUW35_17565;Name=PUW35_17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17565 CP118132.1 Protein Homology CDS 3607817 3608005 . - 0 ID=cds-WJG92368.1;Parent=gene-PUW35_17565;Dbxref=NCBI_GP:WJG92368.1;Name=WJG92368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=PUW35_17565;product=hypothetical protein;protein_id=WJG92368.1;transl_table=11 CP118132.1 Genbank pseudogene 3608328 3609309 . - . ID=gene-PUW35_17570;Name=PUW35_17570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17570;pseudo=true CP118132.1 Protein Homology CDS 3608328 3609309 . - 0 ID=cds-PUW35_17570;Parent=gene-PUW35_17570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=PUW35_17570;product=type III secretion system effector arginine glycosyltransferase SseK1;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3609690 3610034 . + . ID=gene-PUW35_17575;Name=PUW35_17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17575 CP118132.1 Protein Homology CDS 3609690 3610034 . + 0 ID=cds-WJG92369.1;Parent=gene-PUW35_17575;Dbxref=NCBI_GP:WJG92369.1;Name=WJG92369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=PUW35_17575;product=cytoplasmic protein;protein_id=WJG92369.1;transl_table=11 CP118132.1 Genbank gene 3610040 3610363 . - . ID=gene-PUW35_17580;Name=PUW35_17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17580 CP118132.1 Protein Homology CDS 3610040 3610363 . - 0 ID=cds-WJG92370.1;Parent=gene-PUW35_17580;Dbxref=NCBI_GP:WJG92370.1;Name=WJG92370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463024.1;locus_tag=PUW35_17580;product=hypothetical protein;protein_id=WJG92370.1;transl_table=11 CP118132.1 Genbank gene 3610405 3614628 . - . ID=gene-PUW35_17585;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=PUW35_17585 CP118132.1 Protein Homology CDS 3610405 3614628 . - 0 ID=cds-WJG92371.1;Parent=gene-PUW35_17585;Dbxref=NCBI_GP:WJG92371.1;Name=WJG92371.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=PUW35_17585;product=DNA-directed RNA polymerase subunit beta';protein_id=WJG92371.1;transl_table=11 CP118132.1 Genbank gene 3614705 3618733 . - . ID=gene-PUW35_17590;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=PUW35_17590 CP118132.1 Protein Homology CDS 3614705 3618733 . - 0 ID=cds-WJG92372.1;Parent=gene-PUW35_17590;Dbxref=NCBI_GP:WJG92372.1;Name=WJG92372.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=PUW35_17590;product=DNA-directed RNA polymerase subunit beta;protein_id=WJG92372.1;transl_table=11 CP118132.1 Genbank gene 3619051 3619416 . - . ID=gene-PUW35_17595;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=PUW35_17595 CP118132.1 Protein Homology CDS 3619051 3619416 . - 0 ID=cds-WJG92373.1;Parent=gene-PUW35_17595;Dbxref=NCBI_GP:WJG92373.1;Name=WJG92373.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=PUW35_17595;product=50S ribosomal protein L7/L12;protein_id=WJG92373.1;transl_table=11 CP118132.1 Genbank pseudogene 3619483 3619979 . - . ID=gene-PUW35_17600;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=pseudogene;locus_tag=PUW35_17600;pseudo=true CP118132.1 Protein Homology CDS 3619483 3619979 . - 0 ID=cds-PUW35_17600;Parent=gene-PUW35_17600;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=PUW35_17600;product=50S ribosomal protein L10;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3620395 3621099 . - . ID=gene-PUW35_17605;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=PUW35_17605 CP118132.1 Protein Homology CDS 3620395 3621099 . - 0 ID=cds-WJG92374.1;Parent=gene-PUW35_17605;Dbxref=NCBI_GP:WJG92374.1;Name=WJG92374.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=PUW35_17605;product=50S ribosomal protein L1;protein_id=WJG92374.1;transl_table=11 CP118132.1 Genbank pseudogene 3621103 3621530 . - . ID=gene-PUW35_17610;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=pseudogene;locus_tag=PUW35_17610;pseudo=true CP118132.1 Protein Homology CDS 3621103 3621530 . - 0 ID=cds-PUW35_17610;Parent=gene-PUW35_17610;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=PUW35_17610;product=50S ribosomal protein L11;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3621688 3622233 . - . ID=gene-PUW35_17615;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=PUW35_17615 CP118132.1 Protein Homology CDS 3621688 3622233 . - 0 ID=cds-WJG92375.1;Parent=gene-PUW35_17615;Dbxref=NCBI_GP:WJG92375.1;Name=WJG92375.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=PUW35_17615;product=transcription termination/antitermination protein NusG;protein_id=WJG92375.1;transl_table=11 CP118132.1 Genbank gene 3622235 3622618 . - . ID=gene-PUW35_17620;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=PUW35_17620 CP118132.1 Protein Homology CDS 3622235 3622618 . - 0 ID=cds-WJG92376.1;Parent=gene-PUW35_17620;Dbxref=NCBI_GP:WJG92376.1;Name=WJG92376.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=PUW35_17620;product=preprotein translocase subunit SecE;protein_id=WJG92376.1;transl_table=11 CP118132.1 Genbank gene 3622848 3624032 . - . ID=gene-PUW35_17625;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PUW35_17625 CP118132.1 Protein Homology CDS 3622848 3624032 . - 0 ID=cds-WJG92377.1;Parent=gene-PUW35_17625;Dbxref=NCBI_GP:WJG92377.1;Name=WJG92377.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PUW35_17625;product=elongation factor Tu;protein_id=WJG92377.1;transl_table=11 CP118132.1 Genbank gene 3624148 3624223 . - . ID=gene-PUW35_17630;Name=PUW35_17630;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17630 CP118132.1 tRNAscan-SE tRNA 3624148 3624223 . - . ID=rna-PUW35_17630;Parent=gene-PUW35_17630;anticodon=(pos:complement(3624188..3624190));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17630;product=tRNA-Thr CP118132.1 tRNAscan-SE exon 3624148 3624223 . - . ID=exon-PUW35_17630-1;Parent=rna-PUW35_17630;anticodon=(pos:complement(3624188..3624190));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17630;product=tRNA-Thr CP118132.1 Genbank gene 3624230 3624304 . - . ID=gene-PUW35_17635;Name=PUW35_17635;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17635 CP118132.1 tRNAscan-SE tRNA 3624230 3624304 . - . ID=rna-PUW35_17635;Parent=gene-PUW35_17635;anticodon=(pos:complement(3624269..3624271));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17635;product=tRNA-Gly CP118132.1 tRNAscan-SE exon 3624230 3624304 . - . ID=exon-PUW35_17635-1;Parent=rna-PUW35_17635;anticodon=(pos:complement(3624269..3624271));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17635;product=tRNA-Gly CP118132.1 Genbank gene 3624421 3624505 . - . ID=gene-PUW35_17640;Name=PUW35_17640;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17640 CP118132.1 tRNAscan-SE tRNA 3624421 3624505 . - . ID=rna-PUW35_17640;Parent=gene-PUW35_17640;anticodon=(pos:complement(3624469..3624471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17640;product=tRNA-Tyr CP118132.1 tRNAscan-SE exon 3624421 3624505 . - . ID=exon-PUW35_17640-1;Parent=rna-PUW35_17640;anticodon=(pos:complement(3624469..3624471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17640;product=tRNA-Tyr CP118132.1 Genbank gene 3624514 3624589 . - . ID=gene-PUW35_17645;Name=PUW35_17645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17645 CP118132.1 tRNAscan-SE tRNA 3624514 3624589 . - . ID=rna-PUW35_17645;Parent=gene-PUW35_17645;anticodon=(pos:complement(3624554..3624556));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17645;product=tRNA-Thr CP118132.1 tRNAscan-SE exon 3624514 3624589 . - . ID=exon-PUW35_17645-1;Parent=rna-PUW35_17645;anticodon=(pos:complement(3624554..3624556));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17645;product=tRNA-Thr CP118132.1 Genbank gene 3624609 3624782 . + . ID=gene-PUW35_17650;Name=PUW35_17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17650 CP118132.1 Protein Homology CDS 3624609 3624782 . + 0 ID=cds-WJG92378.1;Parent=gene-PUW35_17650;Dbxref=NCBI_GP:WJG92378.1;Name=WJG92378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=PUW35_17650;product=hypothetical protein;protein_id=WJG92378.1;transl_table=11 CP118132.1 Genbank gene 3624991 3625941 . + . ID=gene-PUW35_17655;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=PUW35_17655 CP118132.1 Protein Homology CDS 3624991 3625941 . + 0 ID=cds-WJG92379.1;Parent=gene-PUW35_17655;Dbxref=NCBI_GP:WJG92379.1;Name=WJG92379.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=PUW35_17655;product=type I pantothenate kinase;protein_id=WJG92379.1;transl_table=11 CP118132.1 Genbank gene 3625976 3626938 . - . ID=gene-PUW35_17660;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=PUW35_17660 CP118132.1 Protein Homology CDS 3625976 3626938 . - 0 ID=cds-WJG92380.1;Parent=gene-PUW35_17660;Dbxref=NCBI_GP:WJG92380.1;Name=WJG92380.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=PUW35_17660;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WJG92380.1;transl_table=11 CP118132.1 Genbank gene 3626935 3627963 . - . ID=gene-PUW35_17665;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=PUW35_17665 CP118132.1 Protein Homology CDS 3626935 3627963 . - 0 ID=cds-WJG92381.1;Parent=gene-PUW35_17665;Dbxref=NCBI_GP:WJG92381.1;Name=WJG92381.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=PUW35_17665;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WJG92381.1;transl_table=11 CP118132.1 Genbank gene 3628145 3628260 . - . ID=gene-PUW35_17670;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW35_17670 CP118132.1 cmsearch rRNA 3628145 3628260 . - . ID=rna-PUW35_17670;Parent=gene-PUW35_17670;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17670;product=5S ribosomal RNA CP118132.1 cmsearch exon 3628145 3628260 . - . ID=exon-PUW35_17670-1;Parent=rna-PUW35_17670;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17670;product=5S ribosomal RNA CP118132.1 Genbank gene 3628457 3631445 . - . ID=gene-PUW35_17675;Name=PUW35_17675;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_17675 CP118132.1 cmsearch rRNA 3628457 3631445 . - . ID=rna-PUW35_17675;Parent=gene-PUW35_17675;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17675;product=23S ribosomal RNA CP118132.1 cmsearch exon 3628457 3631445 . - . ID=exon-PUW35_17675-1;Parent=rna-PUW35_17675;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17675;product=23S ribosomal RNA CP118132.1 Genbank gene 3631639 3631714 . - . ID=gene-PUW35_17680;Name=PUW35_17680;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17680 CP118132.1 tRNAscan-SE tRNA 3631639 3631714 . - . ID=rna-PUW35_17680;Parent=gene-PUW35_17680;anticodon=(pos:complement(3631678..3631680));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17680;product=tRNA-Glu CP118132.1 tRNAscan-SE exon 3631639 3631714 . - . ID=exon-PUW35_17680-1;Parent=rna-PUW35_17680;anticodon=(pos:complement(3631678..3631680));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17680;product=tRNA-Glu CP118132.1 Genbank gene 3631800 3633341 . - . ID=gene-PUW35_17685;Name=PUW35_17685;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_17685 CP118132.1 cmsearch rRNA 3631800 3633341 . - . ID=rna-PUW35_17685;Parent=gene-PUW35_17685;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17685;product=16S ribosomal RNA CP118132.1 cmsearch exon 3631800 3633341 . - . ID=exon-PUW35_17685-1;Parent=rna-PUW35_17685;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_17685;product=16S ribosomal RNA CP118132.1 Genbank gene 3633719 3634264 . - . ID=gene-PUW35_17690;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=PUW35_17690 CP118132.1 Protein Homology CDS 3633719 3634264 . - 0 ID=cds-WJG92382.1;Parent=gene-PUW35_17690;Dbxref=NCBI_GP:WJG92382.1;Name=WJG92382.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=PUW35_17690;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WJG92382.1;transl_table=11 CP118132.1 Genbank gene 3634276 3635727 . - . ID=gene-PUW35_17695;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=PUW35_17695 CP118132.1 Protein Homology CDS 3634276 3635727 . - 0 ID=cds-WJG92383.1;Parent=gene-PUW35_17695;Dbxref=NCBI_GP:WJG92383.1;Name=WJG92383.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=PUW35_17695;product=Trk system potassium transporter TrkH;protein_id=WJG92383.1;transl_table=11 CP118132.1 Genbank gene 3635766 3636380 . - . ID=gene-PUW35_17700;Name=PUW35_17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17700 CP118132.1 Protein Homology CDS 3635766 3636380 . - 0 ID=cds-WJG92384.1;Parent=gene-PUW35_17700;Dbxref=NCBI_GP:WJG92384.1;Name=WJG92384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=PUW35_17700;product=IMPACT family protein;protein_id=WJG92384.1;transl_table=11 CP118132.1 Genbank gene 3636380 3637711 . - . ID=gene-PUW35_17705;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=PUW35_17705 CP118132.1 Protein Homology CDS 3636380 3637711 . - 0 ID=cds-WJG92385.1;Parent=gene-PUW35_17705;Dbxref=NCBI_GP:WJG92385.1;Name=WJG92385.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=PUW35_17705;product=Xaa-Pro dipeptidase;protein_id=WJG92385.1;transl_table=11 CP118132.1 Genbank gene 3637885 3640074 . + . ID=gene-PUW35_17710;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=PUW35_17710 CP118132.1 Protein Homology CDS 3637885 3640074 . + 0 ID=cds-WJG92386.1;Parent=gene-PUW35_17710;Dbxref=NCBI_GP:WJG92386.1;Name=WJG92386.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=PUW35_17710;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WJG92386.1;transl_table=11 CP118132.1 Genbank gene 3640084 3641247 . + . ID=gene-PUW35_17715;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=PUW35_17715 CP118132.1 Protein Homology CDS 3640084 3641247 . + 0 ID=cds-WJG92387.1;Parent=gene-PUW35_17715;Dbxref=NCBI_GP:WJG92387.1;Name=WJG92387.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=PUW35_17715;product=acetyl-CoA C-acyltransferase FadA;protein_id=WJG92387.1;transl_table=11 CP118132.1 Genbank gene 3641444 3643267 . - . ID=gene-PUW35_17720;Name=PUW35_17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17720 CP118132.1 Protein Homology CDS 3641444 3643267 . - 0 ID=cds-WJG92388.1;Parent=gene-PUW35_17720;Dbxref=NCBI_GP:WJG92388.1;Name=WJG92388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=PUW35_17720;product=aryl-sulfate sulfotransferase;protein_id=WJG92388.1;transl_table=11 CP118132.1 Genbank pseudogene 3643521 3644221 . - . ID=gene-PUW35_17725;Name=fre;gbkey=Gene;gene=fre;gene_biotype=pseudogene;locus_tag=PUW35_17725;pseudo=true CP118132.1 Protein Homology CDS 3643521 3644221 . - 0 ID=cds-PUW35_17725;Parent=gene-PUW35_17725;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=PUW35_17725;product=NAD(P)H-flavin reductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3644307 3645785 . - . ID=gene-PUW35_17730;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=PUW35_17730 CP118132.1 Protein Homology CDS 3644307 3645785 . - 0 ID=cds-WJG92389.1;Parent=gene-PUW35_17730;Dbxref=NCBI_GP:WJG92389.1;Name=WJG92389.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=PUW35_17730;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WJG92389.1;transl_table=11 CP118132.1 Genbank gene 3645971 3646459 . + . ID=gene-PUW35_17735;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=PUW35_17735 CP118132.1 Protein Homology CDS 3645971 3646459 . + 0 ID=cds-WJG92390.1;Parent=gene-PUW35_17735;Dbxref=NCBI_GP:WJG92390.1;Name=WJG92390.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=PUW35_17735;product=transcription/translation regulatory transformer protein RfaH;protein_id=WJG92390.1;transl_table=11 CP118132.1 Genbank gene 3646467 3647249 . - . ID=gene-PUW35_17740;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=PUW35_17740 CP118132.1 Protein Homology CDS 3646467 3647249 . - 0 ID=cds-WJG92391.1;Parent=gene-PUW35_17740;Dbxref=NCBI_GP:WJG92391.1;Name=WJG92391.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=PUW35_17740;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WJG92391.1;transl_table=11 CP118132.1 Genbank gene 3647291 3648070 . - . ID=gene-PUW35_17745;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=PUW35_17745 CP118132.1 Protein Homology CDS 3647291 3648070 . - 0 ID=cds-WJG92392.1;Parent=gene-PUW35_17745;Dbxref=NCBI_GP:WJG92392.1;Name=WJG92392.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=PUW35_17745;product=Sec-independent protein translocase subunit TatC;protein_id=WJG92392.1;transl_table=11 CP118132.1 Genbank gene 3648073 3648621 . - . ID=gene-PUW35_17750;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=PUW35_17750 CP118132.1 Protein Homology CDS 3648073 3648621 . - 0 ID=cds-WJG92393.1;Parent=gene-PUW35_17750;Dbxref=NCBI_GP:WJG92393.1;Name=WJG92393.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=PUW35_17750;product=Sec-independent protein translocase protein TatB;protein_id=WJG92393.1;transl_table=11 CP118132.1 Genbank gene 3648625 3648879 . - . ID=gene-PUW35_17755;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=PUW35_17755 CP118132.1 Protein Homology CDS 3648625 3648879 . - 0 ID=cds-WJG92394.1;Parent=gene-PUW35_17755;Dbxref=NCBI_GP:WJG92394.1;Name=WJG92394.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=PUW35_17755;product=Sec-independent protein translocase subunit TatA;protein_id=WJG92394.1;transl_table=11 CP118132.1 Genbank gene 3649085 3650725 . - . ID=gene-PUW35_17760;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=PUW35_17760 CP118132.1 Protein Homology CDS 3649085 3650725 . - 0 ID=cds-WJG92395.1;Parent=gene-PUW35_17760;Dbxref=NCBI_GP:WJG92395.1;Name=WJG92395.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=PUW35_17760;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WJG92395.1;transl_table=11 CP118132.1 Genbank gene 3650722 3651327 . - . ID=gene-PUW35_17765;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=PUW35_17765 CP118132.1 Protein Homology CDS 3650722 3651327 . - 0 ID=cds-WJG92396.1;Parent=gene-PUW35_17765;Dbxref=NCBI_GP:WJG92396.1;Name=WJG92396.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=PUW35_17765;product=ubiquinone biosynthesis protein UbiJ;protein_id=WJG92396.1;transl_table=11 CP118132.1 Genbank gene 3651337 3652092 . - . ID=gene-PUW35_17770;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=PUW35_17770 CP118132.1 Protein Homology CDS 3651337 3652092 . - 0 ID=cds-WJG92397.1;Parent=gene-PUW35_17770;Dbxref=NCBI_GP:WJG92397.1;Name=WJG92397.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=PUW35_17770;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WJG92397.1;transl_table=11 CP118132.1 Genbank gene 3652188 3653618 . - . ID=gene-PUW35_17775;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=PUW35_17775 CP118132.1 Protein Homology CDS 3652188 3653618 . - 0 ID=cds-WJG92398.1;Parent=gene-PUW35_17775;Dbxref=NCBI_GP:WJG92398.1;Name=WJG92398.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=PUW35_17775;product=DNA recombination protein RmuC;protein_id=WJG92398.1;transl_table=11 CP118132.1 Genbank gene 3653758 3654519 . - . ID=gene-PUW35_17780;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=PUW35_17780 CP118132.1 Protein Homology CDS 3653758 3654519 . - 0 ID=cds-WJG92399.1;Parent=gene-PUW35_17780;Dbxref=NCBI_GP:WJG92399.1;Name=WJG92399.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=PUW35_17780;product=uridine phosphorylase;protein_id=WJG92399.1;transl_table=11 CP118132.1 Genbank gene 3654778 3655590 . + . ID=gene-PUW35_17785;Name=PUW35_17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17785 CP118132.1 Protein Homology CDS 3654778 3655590 . + 0 ID=cds-WJG92400.1;Parent=gene-PUW35_17785;Dbxref=NCBI_GP:WJG92400.1;Name=WJG92400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=PUW35_17785;product=dienelactone hydrolase family protein;protein_id=WJG92400.1;transl_table=11 CP118132.1 Genbank gene 3655670 3657013 . - . ID=gene-PUW35_17790;Name=PUW35_17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17790 CP118132.1 Protein Homology CDS 3655670 3657013 . - 0 ID=cds-WJG92401.1;Parent=gene-PUW35_17790;Dbxref=NCBI_GP:WJG92401.1;Name=WJG92401.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=PUW35_17790;product=anaerobic sulfatase maturase;protein_id=WJG92401.1;transl_table=11 CP118132.1 Genbank gene 3657357 3659621 . - . ID=gene-PUW35_17795;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=PUW35_17795 CP118132.1 Protein Homology CDS 3657357 3659621 . - 0 ID=cds-WJG92402.1;Parent=gene-PUW35_17795;Dbxref=NCBI_GP:WJG92402.1;Name=WJG92402.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=PUW35_17795;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WJG92402.1;transl_table=11 CP118132.1 Genbank gene 3659870 3660823 . + . ID=gene-PUW35_17800;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=PUW35_17800 CP118132.1 Protein Homology CDS 3659870 3660823 . + 0 ID=cds-WJG92403.1;Parent=gene-PUW35_17800;Dbxref=NCBI_GP:WJG92403.1;Name=WJG92403.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=PUW35_17800;product=HTH-type transcriptional regulator MetR;protein_id=WJG92403.1;transl_table=11 CP118132.1 Genbank gene 3660711 3661610 . - . ID=gene-PUW35_17805;Name=PUW35_17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17805 CP118132.1 Protein Homology CDS 3660711 3661610 . - 0 ID=cds-WJG92404.1;Parent=gene-PUW35_17805;Dbxref=NCBI_GP:WJG92404.1;Name=WJG92404.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=PUW35_17805;product=carboxylate/amino acid/amine transporter;protein_id=WJG92404.1;transl_table=11 CP118132.1 Genbank gene 3661691 3662491 . - . ID=gene-PUW35_17810;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=PUW35_17810 CP118132.1 Protein Homology CDS 3661691 3662491 . - 0 ID=cds-WJG92405.1;Parent=gene-PUW35_17810;Dbxref=NCBI_GP:WJG92405.1;Name=WJG92405.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=PUW35_17810;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WJG92405.1;transl_table=11 CP118132.1 Genbank gene 3662507 3663523 . - . ID=gene-PUW35_17815;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=PUW35_17815 CP118132.1 Protein Homology CDS 3662507 3663523 . - 0 ID=cds-WJG92406.1;Parent=gene-PUW35_17815;Dbxref=NCBI_GP:WJG92406.1;Name=WJG92406.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=PUW35_17815;product=lysophospholipase L2;protein_id=WJG92406.1;transl_table=11 CP118132.1 Genbank gene 3663634 3664224 . + . ID=gene-PUW35_17820;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=PUW35_17820 CP118132.1 Protein Homology CDS 3663634 3664224 . + 0 ID=cds-WJG92407.1;Parent=gene-PUW35_17820;Dbxref=NCBI_GP:WJG92407.1;Name=WJG92407.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576440.1;locus_tag=PUW35_17820;product=homoserine/homoserine lactone efflux protein;protein_id=WJG92407.1;transl_table=11 CP118132.1 Genbank gene 3664248 3664868 . - . ID=gene-PUW35_17825;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=PUW35_17825 CP118132.1 Protein Homology CDS 3664248 3664868 . - 0 ID=cds-WJG92408.1;Parent=gene-PUW35_17825;Dbxref=NCBI_GP:WJG92408.1;Name=WJG92408.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=PUW35_17825;product=threonine export protein RhtC;protein_id=WJG92408.1;transl_table=11 CP118132.1 Genbank gene 3664932 3666761 . - . ID=gene-PUW35_17830;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=PUW35_17830 CP118132.1 Protein Homology CDS 3664932 3666761 . - 0 ID=cds-WJG95135.1;Parent=gene-PUW35_17830;Dbxref=NCBI_GP:WJG95135.1;Name=WJG95135.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=PUW35_17830;product=ATP-dependent DNA helicase RecQ;protein_id=WJG95135.1;transl_table=11 CP118132.1 Genbank pseudogene 3666845 3667713 . - . ID=gene-PUW35_17835;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=pseudogene;locus_tag=PUW35_17835;pseudo=true CP118132.1 Protein Homology CDS 3666845 3667713 . - 0 ID=cds-PUW35_17835;Parent=gene-PUW35_17835;Note=frameshifted;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=PUW35_17835;product=phospholipase A;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3667878 3668345 . + . ID=gene-PUW35_17840;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=PUW35_17840 CP118132.1 Protein Homology CDS 3667878 3668345 . + 0 ID=cds-WJG92409.1;Parent=gene-PUW35_17840;Dbxref=NCBI_GP:WJG92409.1;Name=WJG92409.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=PUW35_17840;product=acyl-CoA thioesterase YigI;protein_id=WJG92409.1;transl_table=11 CP118132.1 Genbank gene 3668389 3669276 . + . ID=gene-PUW35_17845;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PUW35_17845 CP118132.1 Protein Homology CDS 3668389 3669276 . + 0 ID=cds-WJG95136.1;Parent=gene-PUW35_17845;Dbxref=NCBI_GP:WJG95136.1;Name=WJG95136.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=PUW35_17845;product=EamA family transporter RarD;protein_id=WJG95136.1;transl_table=11 CP118132.1 Genbank gene 3669316 3669612 . - . ID=gene-PUW35_17850;Name=PUW35_17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17850 CP118132.1 Protein Homology CDS 3669316 3669612 . - 0 ID=cds-WJG92410.1;Parent=gene-PUW35_17850;Dbxref=NCBI_GP:WJG92410.1;Name=WJG92410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=PUW35_17850;product=hypothetical protein;protein_id=WJG92410.1;transl_table=11 CP118132.1 Genbank gene 3669694 3670167 . + . ID=gene-PUW35_17855;Name=PUW35_17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17855 CP118132.1 Protein Homology CDS 3669694 3670167 . + 0 ID=cds-WJG92411.1;Parent=gene-PUW35_17855;Dbxref=NCBI_GP:WJG92411.1;Name=WJG92411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751908.1;locus_tag=PUW35_17855;product=hypothetical protein;protein_id=WJG92411.1;transl_table=11 CP118132.1 Genbank gene 3670215 3671165 . - . ID=gene-PUW35_17860;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=PUW35_17860 CP118132.1 Protein Homology CDS 3670215 3671165 . - 0 ID=cds-WJG92412.1;Parent=gene-PUW35_17860;Dbxref=NCBI_GP:WJG92412.1;Name=WJG92412.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=PUW35_17860;product=magnesium/cobalt transporter CorA;protein_id=WJG92412.1;transl_table=11 CP118132.1 Genbank gene 3671321 3671377 . - . ID=gene-PUW35_17865;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=PUW35_17865 CP118132.1 Protein Homology CDS 3671321 3671377 . - 0 ID=cds-WJG95137.1;Parent=gene-PUW35_17865;Dbxref=NCBI_GP:WJG95137.1;Name=WJG95137.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=PUW35_17865;product=protein YsgD;protein_id=WJG95137.1;transl_table=11 CP118132.1 Genbank gene 3671637 3673799 . - . ID=gene-PUW35_17870;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=PUW35_17870 CP118132.1 Protein Homology CDS 3671637 3673799 . - 0 ID=cds-WJG92413.1;Parent=gene-PUW35_17870;Dbxref=NCBI_GP:WJG92413.1;Name=WJG92413.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=PUW35_17870;product=DNA helicase II;protein_id=WJG92413.1;transl_table=11 CP118132.1 Genbank gene 3673935 3674651 . - . ID=gene-PUW35_17875;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=PUW35_17875 CP118132.1 Protein Homology CDS 3673935 3674651 . - 0 ID=cds-WJG92414.1;Parent=gene-PUW35_17875;Dbxref=NCBI_GP:WJG92414.1;Name=WJG92414.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=PUW35_17875;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WJG92414.1;transl_table=11 CP118132.1 Genbank gene 3674651 3675553 . - . ID=gene-PUW35_17880;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=PUW35_17880 CP118132.1 Protein Homology CDS 3674651 3675553 . - 0 ID=cds-WJG92415.1;Parent=gene-PUW35_17880;Dbxref=NCBI_GP:WJG92415.1;Name=WJG92415.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=PUW35_17880;product=tyrosine recombinase XerC;protein_id=WJG92415.1;transl_table=11 CP118132.1 Genbank gene 3675550 3676257 . - . ID=gene-PUW35_17885;Name=PUW35_17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17885 CP118132.1 Protein Homology CDS 3675550 3676257 . - 0 ID=cds-WJG92416.1;Parent=gene-PUW35_17885;Dbxref=NCBI_GP:WJG92416.1;Name=WJG92416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=PUW35_17885;product=DUF484 domain-containing protein;protein_id=WJG92416.1;transl_table=11 CP118132.1 Genbank gene 3676254 3677078 . - . ID=gene-PUW35_17890;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=PUW35_17890 CP118132.1 Protein Homology CDS 3676254 3677078 . - 0 ID=cds-WJG95138.1;Parent=gene-PUW35_17890;Dbxref=NCBI_GP:WJG95138.1;Name=WJG95138.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=PUW35_17890;product=diaminopimelate epimerase;protein_id=WJG95138.1;transl_table=11 CP118132.1 Genbank gene 3677115 3677318 . - . ID=gene-PUW35_17895;Name=PUW35_17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17895 CP118132.1 Protein Homology CDS 3677115 3677318 . - 0 ID=cds-WJG92417.1;Parent=gene-PUW35_17895;Dbxref=NCBI_GP:WJG92417.1;Name=WJG92417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=PUW35_17895;product=lipoprotein;protein_id=WJG92417.1;transl_table=11 CP118132.1 Genbank gene 3677504 3677755 . + . ID=gene-PUW35_17900;Name=PUW35_17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17900 CP118132.1 GeneMarkS-2+ CDS 3677504 3677755 . + 0 ID=cds-WJG92418.1;Parent=gene-PUW35_17900;Dbxref=NCBI_GP:WJG92418.1;Name=WJG92418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_17900;product=hypothetical protein;protein_id=WJG92418.1;transl_table=11 CP118132.1 Genbank pseudogene 3677731 3678027 . + . ID=gene-PUW35_17905;Name=PUW35_17905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17905;pseudo=true CP118132.1 Protein Homology CDS 3677731 3678027 . + 0 ID=cds-PUW35_17905;Parent=gene-PUW35_17905;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604297.1;locus_tag=PUW35_17905;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3678015 3678404 . + . ID=gene-PUW35_17910;Name=PUW35_17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17910 CP118132.1 Protein Homology CDS 3678015 3678404 . + 0 ID=cds-WJG92419.1;Parent=gene-PUW35_17910;Dbxref=NCBI_GP:WJG92419.1;Name=WJG92419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=PUW35_17910;product=DUF3021 family protein;protein_id=WJG92419.1;transl_table=11 CP118132.1 Genbank gene 3678474 3678794 . + . ID=gene-PUW35_17915;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=PUW35_17915 CP118132.1 Protein Homology CDS 3678474 3678794 . + 0 ID=cds-WJG92420.1;Parent=gene-PUW35_17915;Dbxref=NCBI_GP:WJG92420.1;Name=WJG92420.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=PUW35_17915;product=iron donor protein CyaY;protein_id=WJG92420.1;transl_table=11 CP118132.1 Genbank pseudogene 3678872 3681417 . - . ID=gene-PUW35_17920;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=pseudogene;locus_tag=PUW35_17920;pseudo=true CP118132.1 Protein Homology CDS 3678872 3681417 . - 0 ID=cds-PUW35_17920;Parent=gene-PUW35_17920;Note=frameshifted;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=PUW35_17920;product=class I adenylate cyclase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3681794 3682735 . + . ID=gene-PUW35_17925;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=PUW35_17925 CP118132.1 Protein Homology CDS 3681794 3682735 . + 0 ID=cds-WJG92421.1;Parent=gene-PUW35_17925;Dbxref=NCBI_GP:WJG92421.1;Name=WJG92421.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=PUW35_17925;product=hydroxymethylbilane synthase;protein_id=WJG92421.1;transl_table=11 CP118132.1 Genbank gene 3682732 3683472 . + . ID=gene-PUW35_17930;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=PUW35_17930 CP118132.1 Protein Homology CDS 3682732 3683472 . + 0 ID=cds-WJG92422.1;Parent=gene-PUW35_17930;Dbxref=NCBI_GP:WJG92422.1;Name=WJG92422.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=PUW35_17930;product=uroporphyrinogen-III synthase;protein_id=WJG92422.1;transl_table=11 CP118132.1 Genbank gene 3683494 3684633 . + . ID=gene-PUW35_17935;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=PUW35_17935 CP118132.1 Protein Homology CDS 3683494 3684633 . + 0 ID=cds-WJG92423.1;Parent=gene-PUW35_17935;Dbxref=NCBI_GP:WJG92423.1;Name=WJG92423.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138965.1;locus_tag=PUW35_17935;product=uroporphyrinogen-III C-methyltransferase;protein_id=WJG92423.1;transl_table=11 CP118132.1 Genbank pseudogene 3684636 3685831 . + . ID=gene-PUW35_17940;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=pseudogene;locus_tag=PUW35_17940;pseudo=true CP118132.1 Protein Homology CDS 3684636 3685831 . + 0 ID=cds-PUW35_17940;Parent=gene-PUW35_17940;Note=frameshifted;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=PUW35_17940;product=protoheme IX biogenesis protein HemY;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3686414 3686490 . - . ID=gene-PUW35_17945;Name=PUW35_17945;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17945 CP118132.1 tRNAscan-SE tRNA 3686414 3686490 . - . ID=rna-PUW35_17945;Parent=gene-PUW35_17945;anticodon=(pos:complement(3686454..3686456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17945;product=tRNA-Pro CP118132.1 tRNAscan-SE exon 3686414 3686490 . - . ID=exon-PUW35_17945-1;Parent=rna-PUW35_17945;anticodon=(pos:complement(3686454..3686456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17945;product=tRNA-Pro CP118132.1 Genbank gene 3686533 3686619 . - . ID=gene-PUW35_17950;Name=PUW35_17950;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17950 CP118132.1 tRNAscan-SE tRNA 3686533 3686619 . - . ID=rna-PUW35_17950;Parent=gene-PUW35_17950;anticodon=(pos:complement(3686583..3686585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17950;product=tRNA-Leu CP118132.1 tRNAscan-SE exon 3686533 3686619 . - . ID=exon-PUW35_17950-1;Parent=rna-PUW35_17950;anticodon=(pos:complement(3686583..3686585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17950;product=tRNA-Leu CP118132.1 Genbank gene 3686640 3686715 . - . ID=gene-PUW35_17955;Name=PUW35_17955;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17955 CP118132.1 tRNAscan-SE tRNA 3686640 3686715 . - . ID=rna-PUW35_17955;Parent=gene-PUW35_17955;anticodon=(pos:complement(3686680..3686682));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17955;product=tRNA-His CP118132.1 tRNAscan-SE exon 3686640 3686715 . - . ID=exon-PUW35_17955-1;Parent=rna-PUW35_17955;anticodon=(pos:complement(3686680..3686682));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17955;product=tRNA-His CP118132.1 Genbank gene 3686770 3686846 . - . ID=gene-PUW35_17960;Name=PUW35_17960;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_17960 CP118132.1 tRNAscan-SE tRNA 3686770 3686846 . - . ID=rna-PUW35_17960;Parent=gene-PUW35_17960;anticodon=(pos:complement(3686810..3686812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17960;product=tRNA-Arg CP118132.1 tRNAscan-SE exon 3686770 3686846 . - . ID=exon-PUW35_17960-1;Parent=rna-PUW35_17960;anticodon=(pos:complement(3686810..3686812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_17960;product=tRNA-Arg CP118132.1 Genbank pseudogene 3686949 3688333 . - . ID=gene-PUW35_17965;Name=PUW35_17965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_17965;pseudo=true CP118132.1 Protein Homology CDS 3686949 3688333 . - 0 ID=cds-PUW35_17965;Parent=gene-PUW35_17965;Note=frameshifted;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=PUW35_17965;product=amino acid permease;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3688540 3689280 . - . ID=gene-PUW35_17970;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=PUW35_17970 CP118132.1 Protein Homology CDS 3688540 3689280 . - 0 ID=cds-WJG92424.1;Parent=gene-PUW35_17970;Dbxref=NCBI_GP:WJG92424.1;Name=WJG92424.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=PUW35_17970;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WJG92424.1;transl_table=11 CP118132.1 Genbank gene 3689277 3690635 . - . ID=gene-PUW35_17975;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=PUW35_17975 CP118132.1 Protein Homology CDS 3689277 3690635 . - 0 ID=cds-WJG92425.1;Parent=gene-PUW35_17975;Dbxref=NCBI_GP:WJG92425.1;Name=WJG92425.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=PUW35_17975;product=ECA oligosaccharide polymerase;protein_id=WJG92425.1;transl_table=11 CP118132.1 Genbank gene 3690632 3691711 . - . ID=gene-PUW35_17980;Name=PUW35_17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_17980 CP118132.1 Protein Homology CDS 3690632 3691711 . - 0 ID=cds-WJG92426.1;Parent=gene-PUW35_17980;Dbxref=NCBI_GP:WJG92426.1;Name=WJG92426.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=PUW35_17980;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WJG92426.1;transl_table=11 CP118132.1 Genbank gene 3691708 3692958 . - . ID=gene-PUW35_17985;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=PUW35_17985 CP118132.1 Protein Homology CDS 3691708 3692958 . - 0 ID=cds-WJG92427.1;Parent=gene-PUW35_17985;Dbxref=NCBI_GP:WJG92427.1;Name=WJG92427.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=PUW35_17985;product=lipid III flippase WzxE;protein_id=WJG92427.1;transl_table=11 CP118132.1 Genbank gene 3692960 3694090 . - . ID=gene-PUW35_17990;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=PUW35_17990 CP118132.1 Protein Homology CDS 3692960 3694090 . - 0 ID=cds-WJG92428.1;Parent=gene-PUW35_17990;Dbxref=NCBI_GP:WJG92428.1;Name=WJG92428.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=PUW35_17990;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WJG92428.1;transl_table=11 CP118132.1 Genbank gene 3694095 3694772 . - . ID=gene-PUW35_17995;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=PUW35_17995 CP118132.1 Protein Homology CDS 3694095 3694772 . - 0 ID=cds-WJG92429.1;Parent=gene-PUW35_17995;Dbxref=NCBI_GP:WJG92429.1;Name=WJG92429.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=PUW35_17995;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WJG92429.1;transl_table=11 CP118132.1 Genbank pseudogene 3694750 3694907 . - . ID=gene-PUW35_18000;Name=PUW35_18000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18000;pseudo=true CP118132.1 Protein Homology CDS 3694750 3694907 . - 0 ID=cds-PUW35_18000;Parent=gene-PUW35_18000;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=PUW35_18000;product=glucose-1-phosphate thymidylyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3695006 3696073 . - . ID=gene-PUW35_18005;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=PUW35_18005 CP118132.1 Protein Homology CDS 3695006 3696073 . - 0 ID=cds-WJG92430.1;Parent=gene-PUW35_18005;Dbxref=NCBI_GP:WJG92430.1;Name=WJG92430.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=PUW35_18005;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WJG92430.1;transl_table=11 CP118132.1 Genbank gene 3696073 3697335 . - . ID=gene-PUW35_18010;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=PUW35_18010 CP118132.1 Protein Homology CDS 3696073 3697335 . - 0 ID=cds-WJG92431.1;Parent=gene-PUW35_18010;Dbxref=NCBI_GP:WJG92431.1;Name=WJG92431.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=PUW35_18010;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WJG92431.1;transl_table=11 CP118132.1 Genbank gene 3697332 3698462 . - . ID=gene-PUW35_18015;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=PUW35_18015 CP118132.1 Protein Homology CDS 3697332 3698462 . - 0 ID=cds-WJG92432.1;Parent=gene-PUW35_18015;Dbxref=NCBI_GP:WJG92432.1;Name=WJG92432.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=PUW35_18015;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WJG92432.1;transl_table=11 CP118132.1 Genbank gene 3698518 3699564 . - . ID=gene-PUW35_18020;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=PUW35_18020 CP118132.1 Protein Homology CDS 3698518 3699564 . - 0 ID=cds-WJG92433.1;Parent=gene-PUW35_18020;Dbxref=NCBI_GP:WJG92433.1;Name=WJG92433.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=PUW35_18020;product=ECA polysaccharide chain length modulation protein;protein_id=WJG92433.1;transl_table=11 CP118132.1 Genbank gene 3699576 3700679 . - . ID=gene-PUW35_18025;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=PUW35_18025 CP118132.1 Protein Homology CDS 3699576 3700679 . - 0 ID=cds-WJG92434.1;Parent=gene-PUW35_18025;Dbxref=NCBI_GP:WJG92434.1;Name=WJG92434.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=PUW35_18025;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WJG92434.1;transl_table=11 CP118132.1 Genbank gene 3700909 3702168 . - . ID=gene-PUW35_18030;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=PUW35_18030 CP118132.1 Protein Homology CDS 3700909 3702168 . - 0 ID=cds-WJG92435.1;Parent=gene-PUW35_18030;Dbxref=NCBI_GP:WJG92435.1;Name=WJG92435.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=PUW35_18030;product=transcription termination factor Rho;protein_id=WJG92435.1;transl_table=11 CP118132.1 Genbank gene 3702256 3702339 . - . ID=gene-PUW35_18035;Name=PUW35_18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18035 CP118132.1 Protein Homology CDS 3702256 3702339 . - 0 ID=cds-WJG95139.1;Parent=gene-PUW35_18035;Dbxref=NCBI_GP:WJG95139.1;Name=WJG95139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=PUW35_18035;product=rho operon leader peptide;protein_id=WJG95139.1;transl_table=11 CP118132.1 Genbank gene 3702587 3702916 . - . ID=gene-PUW35_18040;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PUW35_18040 CP118132.1 Protein Homology CDS 3702587 3702916 . - 0 ID=cds-WJG92436.1;Parent=gene-PUW35_18040;Dbxref=NCBI_GP:WJG92436.1;Name=WJG92436.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=PUW35_18040;product=thioredoxin TrxA;protein_id=WJG92436.1;transl_table=11 CP118132.1 Genbank gene 3703060 3704325 . + . ID=gene-PUW35_18045;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=PUW35_18045 CP118132.1 Protein Homology CDS 3703060 3704325 . + 0 ID=cds-WJG92437.1;Parent=gene-PUW35_18045;Dbxref=NCBI_GP:WJG92437.1;Name=WJG92437.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=PUW35_18045;product=ATP-dependent RNA helicase RhlB;protein_id=WJG92437.1;transl_table=11 CP118132.1 Genbank gene 3704462 3705943 . + . ID=gene-PUW35_18050;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=PUW35_18050 CP118132.1 Protein Homology CDS 3704462 3705943 . + 0 ID=cds-WJG92438.1;Parent=gene-PUW35_18050;Dbxref=NCBI_GP:WJG92438.1;Name=WJG92438.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=PUW35_18050;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WJG92438.1;transl_table=11 CP118132.1 Genbank gene 3705983 3708007 . - . ID=gene-PUW35_18055;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=PUW35_18055 CP118132.1 Protein Homology CDS 3705983 3708007 . - 0 ID=cds-WJG92439.1;Parent=gene-PUW35_18055;Dbxref=NCBI_GP:WJG92439.1;Name=WJG92439.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=PUW35_18055;product=DNA helicase Rep;protein_id=WJG92439.1;transl_table=11 CP118132.1 Genbank pseudogene 3708107 3708259 . - . ID=gene-PUW35_18060;Name=PUW35_18060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18060;pseudo=true CP118132.1 Protein Homology CDS 3708107 3708259 . - 0 ID=cds-PUW35_18060;Parent=gene-PUW35_18060;Note=involved in nicotinamide riboside transport%3B frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=PUW35_18060;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3708545 3708826 . + . ID=gene-PUW35_18065;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=PUW35_18065 CP118132.1 Protein Homology CDS 3708545 3708826 . + 0 ID=cds-WJG92440.1;Parent=gene-PUW35_18065;Dbxref=NCBI_GP:WJG92440.1;Name=WJG92440.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=PUW35_18065;product=peptidylprolyl isomerase PpiC;protein_id=WJG92440.1;transl_table=11 CP118132.1 Genbank gene 3708918 3710393 . - . ID=gene-PUW35_18070;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=PUW35_18070 CP118132.1 Protein Homology CDS 3708918 3710393 . - 0 ID=cds-WJG92441.1;Parent=gene-PUW35_18070;Dbxref=NCBI_GP:WJG92441.1;Name=WJG92441.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=PUW35_18070;product=ketol-acid reductoisomerase;protein_id=WJG92441.1;transl_table=11 CP118132.1 Genbank gene 3710558 3711445 . + . ID=gene-PUW35_18075;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=PUW35_18075 CP118132.1 Protein Homology CDS 3710558 3711445 . + 0 ID=cds-WJG92442.1;Parent=gene-PUW35_18075;Dbxref=NCBI_GP:WJG92442.1;Name=WJG92442.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=PUW35_18075;product=HTH-type transcriptional activator IlvY;protein_id=WJG92442.1;transl_table=11 CP118132.1 Genbank gene 3711448 3711789 . - . ID=gene-PUW35_18080;Name=PUW35_18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18080 CP118132.1 Protein Homology CDS 3711448 3711789 . - 0 ID=cds-WJG92443.1;Parent=gene-PUW35_18080;Dbxref=NCBI_GP:WJG92443.1;Name=WJG92443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=PUW35_18080;product=helix-turn-helix domain-containing protein;protein_id=WJG92443.1;transl_table=11 CP118132.1 Genbank gene 3711786 3712103 . - . ID=gene-PUW35_18085;Name=PUW35_18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18085 CP118132.1 Protein Homology CDS 3711786 3712103 . - 0 ID=cds-WJG95140.1;Parent=gene-PUW35_18085;Dbxref=NCBI_GP:WJG95140.1;Name=WJG95140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=PUW35_18085;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG95140.1;transl_table=11 CP118132.1 Genbank gene 3712386 3713930 . - . ID=gene-PUW35_18090;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=PUW35_18090 CP118132.1 Protein Homology CDS 3712386 3713930 . - 0 ID=cds-WJG95141.1;Parent=gene-PUW35_18090;Dbxref=NCBI_GP:WJG95141.1;Name=WJG95141.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=PUW35_18090;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WJG95141.1;transl_table=11 CP118132.1 Genbank gene 3713933 3715783 . - . ID=gene-PUW35_18095;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=PUW35_18095 CP118132.1 Protein Homology CDS 3713933 3715783 . - 0 ID=cds-WJG92444.1;Parent=gene-PUW35_18095;Dbxref=NCBI_GP:WJG92444.1;Name=WJG92444.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=PUW35_18095;product=dihydroxy-acid dehydratase;protein_id=WJG92444.1;transl_table=11 CP118132.1 Genbank gene 3715943 3716872 . - . ID=gene-PUW35_18100;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=PUW35_18100 CP118132.1 Protein Homology CDS 3715943 3716872 . - 0 ID=cds-WJG92445.1;Parent=gene-PUW35_18100;Dbxref=NCBI_GP:WJG92445.1;Name=WJG92445.1;Ontology_term=GO:0009082,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=PUW35_18100;product=branched-chain-amino-acid transaminase;protein_id=WJG92445.1;transl_table=11 CP118132.1 Genbank gene 3716890 3717153 . - . ID=gene-PUW35_18105;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=PUW35_18105 CP118132.1 Protein Homology CDS 3716890 3717153 . - 0 ID=cds-WJG92446.1;Parent=gene-PUW35_18105;Dbxref=NCBI_GP:WJG92446.1;Name=WJG92446.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=PUW35_18105;product=acetolactate synthase 2 small subunit;protein_id=WJG92446.1;transl_table=11 CP118132.1 Genbank gene 3717150 3718796 . - . ID=gene-PUW35_18110;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=PUW35_18110 CP118132.1 Protein Homology CDS 3717150 3718796 . - 0 ID=cds-WJG92447.1;Parent=gene-PUW35_18110;Dbxref=NCBI_GP:WJG92447.1;Name=WJG92447.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=PUW35_18110;product=acetolactate synthase 2 catalytic subunit;protein_id=WJG92447.1;transl_table=11 CP118132.1 Genbank gene 3718799 3718849 . - . ID=gene-PUW35_18115;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=PUW35_18115 CP118132.1 Protein Homology CDS 3718799 3718849 . - 0 ID=cds-WJG95142.1;Parent=gene-PUW35_18115;Dbxref=NCBI_GP:WJG95142.1;Name=WJG95142.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=PUW35_18115;product=peptide IlvX;protein_id=WJG95142.1;transl_table=11 CP118132.1 Genbank gene 3718935 3719033 . - . ID=gene-PUW35_18120;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=PUW35_18120 CP118132.1 Protein Homology CDS 3718935 3719033 . - 0 ID=cds-WJG92448.1;Parent=gene-PUW35_18120;Dbxref=NCBI_GP:WJG92448.1;Name=WJG92448.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=PUW35_18120;product=ilv operon leader peptide;protein_id=WJG92448.1;transl_table=11 CP118132.1 Genbank gene 3719385 3720905 . + . ID=gene-PUW35_18125;Name=PUW35_18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18125 CP118132.1 Protein Homology CDS 3719385 3720905 . + 0 ID=cds-WJG92449.1;Parent=gene-PUW35_18125;Dbxref=NCBI_GP:WJG92449.1;Name=WJG92449.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=PUW35_18125;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WJG92449.1;transl_table=11 CP118132.1 Genbank gene 3720930 3721268 . - . ID=gene-PUW35_18130;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=PUW35_18130 CP118132.1 Protein Homology CDS 3720930 3721268 . - 0 ID=cds-WJG92450.1;Parent=gene-PUW35_18130;Dbxref=NCBI_GP:WJG92450.1;Name=WJG92450.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=PUW35_18130;product=macrodomain Ori organization protein MaoP;protein_id=WJG92450.1;transl_table=11 CP118132.1 Genbank gene 3721375 3722223 . + . ID=gene-PUW35_18135;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=PUW35_18135 CP118132.1 Protein Homology CDS 3721375 3722223 . + 0 ID=cds-WJG92451.1;Parent=gene-PUW35_18135;Dbxref=NCBI_GP:WJG92451.1;Name=WJG92451.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=PUW35_18135;product=HTH-type transcriptional regulator HdfR;protein_id=WJG92451.1;transl_table=11 CP118132.1 Genbank gene 3722325 3722399 . - . ID=gene-PUW35_18140;Name=PUW35_18140;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_18140 CP118132.1 tRNAscan-SE tRNA 3722325 3722399 . - . ID=rna-PUW35_18140;Parent=gene-PUW35_18140;anticodon=(pos:complement(3722365..3722367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18140;product=tRNA-Trp CP118132.1 tRNAscan-SE exon 3722325 3722399 . - . ID=exon-PUW35_18140-1;Parent=rna-PUW35_18140;anticodon=(pos:complement(3722365..3722367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18140;product=tRNA-Trp CP118132.1 Genbank gene 3722408 3722484 . - . ID=gene-PUW35_18145;Name=PUW35_18145;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_18145 CP118132.1 tRNAscan-SE tRNA 3722408 3722484 . - . ID=rna-PUW35_18145;Parent=gene-PUW35_18145;anticodon=(pos:complement(3722448..3722450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18145;product=tRNA-Asp CP118132.1 tRNAscan-SE exon 3722408 3722484 . - . ID=exon-PUW35_18145-1;Parent=rna-PUW35_18145;anticodon=(pos:complement(3722448..3722450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18145;product=tRNA-Asp CP118132.1 Genbank gene 3722676 3722791 . - . ID=gene-PUW35_18150;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW35_18150 CP118132.1 cmsearch rRNA 3722676 3722791 . - . ID=rna-PUW35_18150;Parent=gene-PUW35_18150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_18150;product=5S ribosomal RNA CP118132.1 cmsearch exon 3722676 3722791 . - . ID=exon-PUW35_18150-1;Parent=rna-PUW35_18150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_18150;product=5S ribosomal RNA CP118132.1 Genbank gene 3722988 3725976 . - . ID=gene-PUW35_18155;Name=PUW35_18155;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_18155 CP118132.1 cmsearch rRNA 3722988 3725976 . - . ID=rna-PUW35_18155;Parent=gene-PUW35_18155;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_18155;product=23S ribosomal RNA CP118132.1 cmsearch exon 3722988 3725976 . - . ID=exon-PUW35_18155-1;Parent=rna-PUW35_18155;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_18155;product=23S ribosomal RNA CP118132.1 Genbank gene 3726159 3726234 . - . ID=gene-PUW35_18160;Name=PUW35_18160;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_18160 CP118132.1 tRNAscan-SE tRNA 3726159 3726234 . - . ID=rna-PUW35_18160;Parent=gene-PUW35_18160;anticodon=(pos:complement(3726199..3726201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18160;product=tRNA-Ala CP118132.1 tRNAscan-SE exon 3726159 3726234 . - . ID=exon-PUW35_18160-1;Parent=rna-PUW35_18160;anticodon=(pos:complement(3726199..3726201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18160;product=tRNA-Ala CP118132.1 Genbank gene 3726346 3726422 . - . ID=gene-PUW35_18165;Name=PUW35_18165;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_18165 CP118132.1 tRNAscan-SE tRNA 3726346 3726422 . - . ID=rna-PUW35_18165;Parent=gene-PUW35_18165;anticodon=(pos:complement(3726386..3726388));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18165;product=tRNA-Ile CP118132.1 tRNAscan-SE exon 3726346 3726422 . - . ID=exon-PUW35_18165-1;Parent=rna-PUW35_18165;anticodon=(pos:complement(3726386..3726388));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18165;product=tRNA-Ile CP118132.1 Genbank gene 3726492 3728033 . - . ID=gene-PUW35_18170;Name=PUW35_18170;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_18170 CP118132.1 cmsearch rRNA 3726492 3728033 . - . ID=rna-PUW35_18170;Parent=gene-PUW35_18170;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_18170;product=16S ribosomal RNA CP118132.1 cmsearch exon 3726492 3728033 . - . ID=exon-PUW35_18170-1;Parent=rna-PUW35_18170;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_18170;product=16S ribosomal RNA CP118132.1 Genbank gene 3728514 3729218 . + . ID=gene-PUW35_18175;Name=PUW35_18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18175 CP118132.1 Protein Homology CDS 3728514 3729218 . + 0 ID=cds-WJG92452.1;Parent=gene-PUW35_18175;Dbxref=NCBI_GP:WJG92452.1;Name=WJG92452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=PUW35_18175;product=FadR/GntR family transcriptional regulator;protein_id=WJG92452.1;transl_table=11 CP118132.1 Genbank gene 3729230 3730657 . + . ID=gene-PUW35_18180;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=PUW35_18180 CP118132.1 Protein Homology CDS 3729230 3730657 . + 0 ID=cds-WJG92453.1;Parent=gene-PUW35_18180;Dbxref=NCBI_GP:WJG92453.1;Name=WJG92453.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=PUW35_18180;product=multidrug transporter subunit MdtD;protein_id=WJG92453.1;transl_table=11 CP118132.1 Genbank gene 3730623 3731621 . - . ID=gene-PUW35_18185;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=PUW35_18185 CP118132.1 Protein Homology CDS 3730623 3731621 . - 0 ID=cds-WJG92454.1;Parent=gene-PUW35_18185;Dbxref=NCBI_GP:WJG92454.1;Name=WJG92454.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=PUW35_18185;product=ribose operon transcriptional repressor RbsR;protein_id=WJG92454.1;transl_table=11 CP118132.1 Genbank pseudogene 3731625 3732553 . - . ID=gene-PUW35_18190;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=pseudogene;locus_tag=PUW35_18190;pseudo=true CP118132.1 Protein Homology CDS 3731625 3732553 . - 0 ID=cds-PUW35_18190;Parent=gene-PUW35_18190;Note=frameshifted;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=PUW35_18190;product=ribokinase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3732686 3733575 . - . ID=gene-PUW35_18195;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=pseudogene;locus_tag=PUW35_18195;pseudo=true CP118132.1 Protein Homology CDS 3732686 3733575 . - 0 ID=cds-PUW35_18195;Parent=gene-PUW35_18195;Note=frameshifted;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=PUW35_18195;product=ribose ABC transporter substrate-binding protein RbsB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3733600 3734565 . - . ID=gene-PUW35_18200;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=PUW35_18200 CP118132.1 Protein Homology CDS 3733600 3734565 . - 0 ID=cds-WJG92455.1;Parent=gene-PUW35_18200;Dbxref=NCBI_GP:WJG92455.1;Name=WJG92455.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=PUW35_18200;product=ribose ABC transporter permease;protein_id=WJG92455.1;transl_table=11 CP118132.1 Genbank pseudogene 3734571 3736076 . - . ID=gene-PUW35_18205;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=pseudogene;locus_tag=PUW35_18205;pseudo=true CP118132.1 Protein Homology CDS 3734571 3736076 . - 0 ID=cds-PUW35_18205;Parent=gene-PUW35_18205;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=PUW35_18205;product=ribose ABC transporter ATP-binding protein RbsA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3736084 3736503 . - . ID=gene-PUW35_18210;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=PUW35_18210 CP118132.1 Protein Homology CDS 3736084 3736503 . - 0 ID=cds-WJG92456.1;Parent=gene-PUW35_18210;Dbxref=NCBI_GP:WJG92456.1;Name=WJG92456.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=PUW35_18210;product=D-ribose pyranase;protein_id=WJG92456.1;transl_table=11 CP118132.1 Genbank gene 3736720 3738588 . - . ID=gene-PUW35_18215;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=PUW35_18215 CP118132.1 Protein Homology CDS 3736720 3738588 . - 0 ID=cds-WJG92457.1;Parent=gene-PUW35_18215;Dbxref=NCBI_GP:WJG92457.1;Name=WJG92457.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=PUW35_18215;product=low affinity potassium transporter Kup;protein_id=WJG92457.1;transl_table=11 CP118132.1 Genbank gene 3738932 3740428 . + . ID=gene-PUW35_18220;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=PUW35_18220 CP118132.1 Protein Homology CDS 3738932 3740428 . + 0 ID=cds-WJG92458.1;Parent=gene-PUW35_18220;Dbxref=NCBI_GP:WJG92458.1;Name=WJG92458.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=PUW35_18220;product=ATPase RavA;protein_id=WJG92458.1;transl_table=11 CP118132.1 Genbank gene 3740422 3741873 . + . ID=gene-PUW35_18225;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=PUW35_18225 CP118132.1 Protein Homology CDS 3740422 3741873 . + 0 ID=cds-WJG92459.1;Parent=gene-PUW35_18225;Dbxref=NCBI_GP:WJG92459.1;Name=WJG92459.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=PUW35_18225;product=ATPase RavA stimulator ViaA;protein_id=WJG92459.1;transl_table=11 CP118132.1 Genbank pseudogene 3741878 3742870 . - . ID=gene-PUW35_18230;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=pseudogene;locus_tag=PUW35_18230;pseudo=true CP118132.1 Protein Homology CDS 3741878 3742870 . - 0 ID=cds-PUW35_18230;Parent=gene-PUW35_18230;Note=internal stop;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=PUW35_18230;product=aspartate--ammonia ligase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3743021 3743479 . + . ID=gene-PUW35_18235;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=PUW35_18235 CP118132.1 Protein Homology CDS 3743021 3743479 . + 0 ID=cds-WJG92460.1;Parent=gene-PUW35_18235;Dbxref=NCBI_GP:WJG92460.1;Name=WJG92460.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=PUW35_18235;product=transcriptional regulator AsnC;protein_id=WJG92460.1;transl_table=11 CP118132.1 Genbank gene 3743569 3744012 . + . ID=gene-PUW35_18240;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=PUW35_18240 CP118132.1 Protein Homology CDS 3743569 3744012 . + 0 ID=cds-WJG92461.1;Parent=gene-PUW35_18240;Dbxref=NCBI_GP:WJG92461.1;Name=WJG92461.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=PUW35_18240;product=FMN-binding protein MioC;protein_id=WJG92461.1;transl_table=11 CP118132.1 Genbank gene 3744391 3746280 . + . ID=gene-PUW35_18245;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=PUW35_18245 CP118132.1 Protein Homology CDS 3744391 3746280 . + 0 ID=cds-WJG92462.1;Parent=gene-PUW35_18245;Dbxref=NCBI_GP:WJG92462.1;Name=WJG92462.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=PUW35_18245;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WJG92462.1;transl_table=11 CP118132.1 Genbank gene 3746383 3747006 . + . ID=gene-PUW35_18250;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=PUW35_18250 CP118132.1 Protein Homology CDS 3746383 3747006 . + 0 ID=cds-WJG92463.1;Parent=gene-PUW35_18250;Dbxref=NCBI_GP:WJG92463.1;Name=WJG92463.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=PUW35_18250;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WJG92463.1;transl_table=11 CP118132.1 Genbank gene 3747622 3748002 . + . ID=gene-PUW35_18255;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=PUW35_18255 CP118132.1 Protein Homology CDS 3747622 3748002 . + 0 ID=cds-WJG92464.1;Parent=gene-PUW35_18255;Dbxref=NCBI_GP:WJG92464.1;Name=WJG92464.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=PUW35_18255;product=F0F1 ATP synthase subunit I;protein_id=WJG92464.1;transl_table=11 CP118132.1 Genbank gene 3748011 3748826 . + . ID=gene-PUW35_18260;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=PUW35_18260 CP118132.1 Protein Homology CDS 3748011 3748826 . + 0 ID=cds-WJG92465.1;Parent=gene-PUW35_18260;Dbxref=NCBI_GP:WJG92465.1;Name=WJG92465.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=PUW35_18260;product=F0F1 ATP synthase subunit A;protein_id=WJG92465.1;transl_table=11 CP118132.1 Genbank gene 3748873 3749112 . + . ID=gene-PUW35_18265;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=PUW35_18265 CP118132.1 Protein Homology CDS 3748873 3749112 . + 0 ID=cds-WJG92466.1;Parent=gene-PUW35_18265;Dbxref=NCBI_GP:WJG92466.1;Name=WJG92466.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=PUW35_18265;product=F0F1 ATP synthase subunit C;protein_id=WJG92466.1;transl_table=11 CP118132.1 Genbank gene 3749172 3749642 . + . ID=gene-PUW35_18270;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=PUW35_18270 CP118132.1 Protein Homology CDS 3749172 3749642 . + 0 ID=cds-WJG92467.1;Parent=gene-PUW35_18270;Dbxref=NCBI_GP:WJG92467.1;Name=WJG92467.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=PUW35_18270;product=F0F1 ATP synthase subunit B;protein_id=WJG92467.1;transl_table=11 CP118132.1 Genbank gene 3749657 3750190 . + . ID=gene-PUW35_18275;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=PUW35_18275 CP118132.1 Protein Homology CDS 3749657 3750190 . + 0 ID=cds-WJG92468.1;Parent=gene-PUW35_18275;Dbxref=NCBI_GP:WJG92468.1;Name=WJG92468.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=PUW35_18275;product=F0F1 ATP synthase subunit delta;protein_id=WJG92468.1;transl_table=11 CP118132.1 Genbank gene 3750203 3751744 . + . ID=gene-PUW35_18280;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=PUW35_18280 CP118132.1 Protein Homology CDS 3750203 3751744 . + 0 ID=cds-WJG92469.1;Parent=gene-PUW35_18280;Dbxref=NCBI_GP:WJG92469.1;Name=WJG92469.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=PUW35_18280;product=F0F1 ATP synthase subunit alpha;protein_id=WJG92469.1;transl_table=11 CP118132.1 Genbank gene 3751795 3752658 . + . ID=gene-PUW35_18285;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=PUW35_18285 CP118132.1 Protein Homology CDS 3751795 3752658 . + 0 ID=cds-WJG92470.1;Parent=gene-PUW35_18285;Dbxref=NCBI_GP:WJG92470.1;Name=WJG92470.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=PUW35_18285;product=F0F1 ATP synthase subunit gamma;protein_id=WJG92470.1;transl_table=11 CP118132.1 Genbank gene 3752685 3754067 . + . ID=gene-PUW35_18290;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=PUW35_18290 CP118132.1 Protein Homology CDS 3752685 3754067 . + 0 ID=cds-WJG92471.1;Parent=gene-PUW35_18290;Dbxref=NCBI_GP:WJG92471.1;Name=WJG92471.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=PUW35_18290;product=F0F1 ATP synthase subunit beta;protein_id=WJG92471.1;transl_table=11 CP118132.1 Genbank gene 3754088 3754507 . + . ID=gene-PUW35_18295;Name=PUW35_18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18295 CP118132.1 Protein Homology CDS 3754088 3754507 . + 0 ID=cds-WJG92472.1;Parent=gene-PUW35_18295;Dbxref=NCBI_GP:WJG92472.1;Name=WJG92472.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=PUW35_18295;product=F0F1 ATP synthase subunit epsilon;protein_id=WJG92472.1;transl_table=11 CP118132.1 Genbank gene 3754737 3755435 . + . ID=gene-PUW35_18300;Name=PUW35_18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18300 CP118132.1 Protein Homology CDS 3754737 3755435 . + 0 ID=cds-WJG92473.1;Parent=gene-PUW35_18300;Dbxref=NCBI_GP:WJG92473.1;Name=WJG92473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=PUW35_18300;product=Bax inhibitor-1 family protein;protein_id=WJG92473.1;transl_table=11 CP118132.1 Genbank gene 3755755 3757125 . + . ID=gene-PUW35_18305;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=PUW35_18305 CP118132.1 Protein Homology CDS 3755755 3757125 . + 0 ID=cds-WJG92474.1;Parent=gene-PUW35_18305;Dbxref=NCBI_GP:WJG92474.1;Name=WJG92474.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=PUW35_18305;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WJG92474.1;transl_table=11 CP118132.1 Genbank pseudogene 3757314 3759142 . + . ID=gene-PUW35_18310;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=pseudogene;locus_tag=PUW35_18310;pseudo=true CP118132.1 Protein Homology CDS 3757314 3759142 . + 0 ID=cds-PUW35_18310;Parent=gene-PUW35_18310;Note=frameshifted;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=PUW35_18310;product=glutamine--fructose-6-phosphate transaminase (isomerizing);pseudo=true;transl_table=11 CP118132.1 Genbank gene 3759293 3761050 . - . ID=gene-PUW35_18315;Name=PUW35_18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18315 CP118132.1 Protein Homology CDS 3759293 3761050 . - 0 ID=cds-WJG92475.1;Parent=gene-PUW35_18315;Dbxref=NCBI_GP:WJG92475.1;Name=WJG92475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=PUW35_18315;product=SgrR family transcriptional regulator;protein_id=WJG92475.1;transl_table=11 CP118132.1 Genbank gene 3761145 3761963 . + . ID=gene-PUW35_18320;Name=PUW35_18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18320 CP118132.1 Protein Homology CDS 3761145 3761963 . + 0 ID=cds-WJG92476.1;Parent=gene-PUW35_18320;Dbxref=NCBI_GP:WJG92476.1;Name=WJG92476.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=PUW35_18320;product=shikimate 5-dehydrogenase;protein_id=WJG92476.1;transl_table=11 CP118132.1 Genbank gene 3762012 3763385 . + . ID=gene-PUW35_18325;Name=PUW35_18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18325 CP118132.1 Protein Homology CDS 3762012 3763385 . + 0 ID=cds-WJG92477.1;Parent=gene-PUW35_18325;Dbxref=NCBI_GP:WJG92477.1;Name=WJG92477.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=PUW35_18325;product=fructose-specific PTS transporter subunit EIIC;protein_id=WJG92477.1;transl_table=11 CP118132.1 Genbank gene 3763551 3764591 . + . ID=gene-PUW35_18330;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=PUW35_18330 CP118132.1 Protein Homology CDS 3763551 3764591 . + 0 ID=cds-WJG92478.1;Parent=gene-PUW35_18330;Dbxref=NCBI_GP:WJG92478.1;Name=WJG92478.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=PUW35_18330;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WJG92478.1;transl_table=11 CP118132.1 Genbank gene 3764727 3765686 . + . ID=gene-PUW35_18335;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=PUW35_18335 CP118132.1 Protein Homology CDS 3764727 3765686 . + 0 ID=cds-WJG92479.1;Parent=gene-PUW35_18335;Dbxref=NCBI_GP:WJG92479.1;Name=WJG92479.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=PUW35_18335;product=phosphate ABC transporter permease PstC;protein_id=WJG92479.1;transl_table=11 CP118132.1 Genbank pseudogene 3765686 3766575 . + . ID=gene-PUW35_18340;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=pseudogene;locus_tag=PUW35_18340;pseudo=true CP118132.1 Protein Homology CDS 3765686 3766575 . + 0 ID=cds-PUW35_18340;Parent=gene-PUW35_18340;Note=frameshifted;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=PUW35_18340;product=phosphate ABC transporter permease PstA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3766662 3767435 . + . ID=gene-PUW35_18345;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=PUW35_18345 CP118132.1 Protein Homology CDS 3766662 3767435 . + 0 ID=cds-WJG92480.1;Parent=gene-PUW35_18345;Dbxref=NCBI_GP:WJG92480.1;Name=WJG92480.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=PUW35_18345;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WJG92480.1;transl_table=11 CP118132.1 Genbank gene 3767450 3768175 . + . ID=gene-PUW35_18350;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=PUW35_18350 CP118132.1 Protein Homology CDS 3767450 3768175 . + 0 ID=cds-WJG92481.1;Parent=gene-PUW35_18350;Dbxref=NCBI_GP:WJG92481.1;Name=WJG92481.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=PUW35_18350;product=phosphate signaling complex protein PhoU;protein_id=WJG92481.1;transl_table=11 CP118132.1 Genbank gene 3768270 3768935 . - . ID=gene-PUW35_18355;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=PUW35_18355 CP118132.1 Protein Homology CDS 3768270 3768935 . - 0 ID=cds-WJG92482.1;Parent=gene-PUW35_18355;Dbxref=NCBI_GP:WJG92482.1;Name=WJG92482.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=PUW35_18355;product=6-phosphogluconate phosphatase;protein_id=WJG92482.1;transl_table=11 CP118132.1 Genbank gene 3769104 3770441 . + . ID=gene-PUW35_18360;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=PUW35_18360 CP118132.1 Protein Homology CDS 3769104 3770441 . + 0 ID=cds-WJG92483.1;Parent=gene-PUW35_18360;Dbxref=NCBI_GP:WJG92483.1;Name=WJG92483.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=PUW35_18360;product=adenine permease AdeP;protein_id=WJG92483.1;transl_table=11 CP118132.1 Genbank gene 3770486 3771070 . - . ID=gene-PUW35_18365;Name=PUW35_18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18365 CP118132.1 Protein Homology CDS 3770486 3771070 . - 0 ID=cds-WJG92484.1;Parent=gene-PUW35_18365;Dbxref=NCBI_GP:WJG92484.1;Name=WJG92484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=PUW35_18365;product=NAD(P)H-dependent oxidoreductase;protein_id=WJG92484.1;transl_table=11 CP118132.1 Genbank gene 3771070 3771825 . - . ID=gene-PUW35_18370;Name=PUW35_18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18370 CP118132.1 Protein Homology CDS 3771070 3771825 . - 0 ID=cds-WJG92485.1;Parent=gene-PUW35_18370;Dbxref=NCBI_GP:WJG92485.1;Name=WJG92485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=PUW35_18370;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WJG92485.1;transl_table=11 CP118132.1 Genbank gene 3771983 3772921 . - . ID=gene-PUW35_18375;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=PUW35_18375 CP118132.1 Protein Homology CDS 3771983 3772921 . - 0 ID=cds-WJG92486.1;Parent=gene-PUW35_18375;Dbxref=NCBI_GP:WJG92486.1;Name=WJG92486.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=PUW35_18375;product=HTH-type transcriptional regulator YidZ;protein_id=WJG92486.1;transl_table=11 CP118132.1 Genbank gene 3772890 3774014 . - . ID=gene-PUW35_18380;Name=PUW35_18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18380 CP118132.1 Protein Homology CDS 3772890 3774014 . - 0 ID=cds-WJG92487.1;Parent=gene-PUW35_18380;Dbxref=NCBI_GP:WJG92487.1;Name=WJG92487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=PUW35_18380;product=MFS transporter;protein_id=WJG92487.1;transl_table=11 CP118132.1 Genbank gene 3774197 3775561 . - . ID=gene-PUW35_18385;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=PUW35_18385 CP118132.1 Protein Homology CDS 3774197 3775561 . - 0 ID=cds-WJG92488.1;Parent=gene-PUW35_18385;Dbxref=NCBI_GP:WJG92488.1;Name=WJG92488.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=PUW35_18385;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WJG92488.1;transl_table=11 CP118132.1 Genbank gene 3775703 3777349 . - . ID=gene-PUW35_18390;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=PUW35_18390 CP118132.1 Protein Homology CDS 3775703 3777349 . - 0 ID=cds-WJG92489.1;Parent=gene-PUW35_18390;Dbxref=NCBI_GP:WJG92489.1;Name=WJG92489.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=PUW35_18390;product=membrane protein insertase YidC;protein_id=WJG92489.1;transl_table=11 CP118132.1 Genbank gene 3777352 3777609 . - . ID=gene-PUW35_18395;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=PUW35_18395 CP118132.1 Protein Homology CDS 3777352 3777609 . - 0 ID=cds-WJG92490.1;Parent=gene-PUW35_18395;Dbxref=NCBI_GP:WJG92490.1;Name=WJG92490.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=PUW35_18395;product=membrane protein insertion efficiency factor YidD;protein_id=WJG92490.1;transl_table=11 CP118132.1 Genbank pseudogene 3777573 3777931 . - . ID=gene-PUW35_18400;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=pseudogene;locus_tag=PUW35_18400;pseudo=true CP118132.1 Protein Homology CDS 3777573 3777931 . - 0 ID=cds-PUW35_18400;Parent=gene-PUW35_18400;Note=frameshifted;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=PUW35_18400;product=ribonuclease P protein component;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3777948 3778088 . - . ID=gene-PUW35_18405;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=PUW35_18405 CP118132.1 Protein Homology CDS 3777948 3778088 . - 0 ID=cds-WJG92491.1;Parent=gene-PUW35_18405;Dbxref=NCBI_GP:WJG92491.1;Name=WJG92491.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=PUW35_18405;product=50S ribosomal protein L34;protein_id=WJG92491.1;transl_table=11 CP118132.1 Genbank gene 3778749 3780149 . + . ID=gene-PUW35_18410;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=PUW35_18410 CP118132.1 Protein Homology CDS 3778749 3780149 . + 0 ID=cds-WJG92492.1;Parent=gene-PUW35_18410;Dbxref=NCBI_GP:WJG92492.1;Name=WJG92492.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=PUW35_18410;product=chromosomal replication initiator protein DnaA;protein_id=WJG92492.1;transl_table=11 CP118132.1 Genbank gene 3780154 3781254 . + . ID=gene-PUW35_18415;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=PUW35_18415 CP118132.1 Protein Homology CDS 3780154 3781254 . + 0 ID=cds-WJG92493.1;Parent=gene-PUW35_18415;Dbxref=NCBI_GP:WJG92493.1;Name=WJG92493.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=PUW35_18415;product=DNA polymerase III subunit beta;protein_id=WJG92493.1;transl_table=11 CP118132.1 Genbank gene 3781402 3782475 . + . ID=gene-PUW35_18420;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=PUW35_18420 CP118132.1 Protein Homology CDS 3781402 3782475 . + 0 ID=cds-WJG92494.1;Parent=gene-PUW35_18420;Dbxref=NCBI_GP:WJG92494.1;Name=WJG92494.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=PUW35_18420;product=DNA replication/repair protein RecF;protein_id=WJG92494.1;transl_table=11 CP118132.1 Genbank gene 3782504 3784918 . + . ID=gene-PUW35_18425;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=PUW35_18425 CP118132.1 Protein Homology CDS 3782504 3784918 . + 0 ID=cds-WJG92495.1;Parent=gene-PUW35_18425;Dbxref=NCBI_GP:WJG92495.1;Name=WJG92495.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=PUW35_18425;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WJG92495.1;transl_table=11 CP118132.1 Genbank gene 3784937 3785833 . - . ID=gene-PUW35_18430;Name=PUW35_18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18430 CP118132.1 Protein Homology CDS 3784937 3785833 . - 0 ID=cds-WJG92496.1;Parent=gene-PUW35_18430;Dbxref=NCBI_GP:WJG92496.1;Name=WJG92496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=PUW35_18430;product=LysR family transcriptional regulator;protein_id=WJG92496.1;transl_table=11 CP118132.1 Genbank gene 3785948 3787141 . - . ID=gene-PUW35_18435;Name=PUW35_18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18435 CP118132.1 Protein Homology CDS 3785948 3787141 . - 0 ID=cds-WJG92497.1;Parent=gene-PUW35_18435;Dbxref=NCBI_GP:WJG92497.1;Name=WJG92497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=PUW35_18435;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WJG92497.1;transl_table=11 CP118132.1 Genbank pseudogene 3787155 3788417 . - . ID=gene-PUW35_18440;Name=PUW35_18440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18440;pseudo=true CP118132.1 Protein Homology CDS 3787155 3788417 . - 0 ID=cds-PUW35_18440;Parent=gene-PUW35_18440;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=PUW35_18440;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3788722 3789567 . + . ID=gene-PUW35_18445;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=PUW35_18445 CP118132.1 Protein Homology CDS 3788722 3789567 . + 0 ID=cds-WJG92498.1;Parent=gene-PUW35_18445;Dbxref=NCBI_GP:WJG92498.1;Name=WJG92498.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=PUW35_18445;product=sugar-phosphatase;protein_id=WJG92498.1;transl_table=11 CP118132.1 Genbank gene 3789828 3790517 . + . ID=gene-PUW35_18450;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=PUW35_18450 CP118132.1 Protein Homology CDS 3789828 3790517 . + 0 ID=cds-WJG92499.1;Parent=gene-PUW35_18450;Dbxref=NCBI_GP:WJG92499.1;Name=WJG92499.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=PUW35_18450;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WJG92499.1;transl_table=11 CP118132.1 Genbank gene 3790514 3791392 . + . ID=gene-PUW35_18455;Name=PUW35_18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18455 CP118132.1 Protein Homology CDS 3790514 3791392 . + 0 ID=cds-WJG92500.1;Parent=gene-PUW35_18455;Dbxref=NCBI_GP:WJG92500.1;Name=WJG92500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=PUW35_18455;product=2-dehydro-3-deoxygalactonokinase;protein_id=WJG92500.1;transl_table=11 CP118132.1 Genbank gene 3791376 3791993 . + . ID=gene-PUW35_18460;Name=PUW35_18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18460 CP118132.1 Protein Homology CDS 3791376 3791993 . + 0 ID=cds-WJG92501.1;Parent=gene-PUW35_18460;Dbxref=NCBI_GP:WJG92501.1;Name=WJG92501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=PUW35_18460;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WJG92501.1;transl_table=11 CP118132.1 Genbank gene 3791990 3793138 . + . ID=gene-PUW35_18465;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=PUW35_18465 CP118132.1 Protein Homology CDS 3791990 3793138 . + 0 ID=cds-WJG92502.1;Parent=gene-PUW35_18465;Dbxref=NCBI_GP:WJG92502.1;Name=WJG92502.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=PUW35_18465;product=galactonate dehydratase;protein_id=WJG92502.1;transl_table=11 CP118132.1 Genbank gene 3793223 3794560 . + . ID=gene-PUW35_18470;Name=PUW35_18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18470 CP118132.1 Protein Homology CDS 3793223 3794560 . + 0 ID=cds-WJG92503.1;Parent=gene-PUW35_18470;Dbxref=NCBI_GP:WJG92503.1;Name=WJG92503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=PUW35_18470;product=MFS transporter;protein_id=WJG92503.1;transl_table=11 CP118132.1 Genbank pseudogene 3794586 3797320 . - . ID=gene-PUW35_18475;Name=torS;gbkey=Gene;gene=torS;gene_biotype=pseudogene;locus_tag=PUW35_18475;pseudo=true CP118132.1 Protein Homology CDS 3794586 3797320 . - 0 ID=cds-PUW35_18475;Parent=gene-PUW35_18475;Note=frameshifted;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=PUW35_18475;product=TMAO reductase system sensor histidine kinase/response regulator TorS;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3797400 3798440 . + . ID=gene-PUW35_18480;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=PUW35_18480 CP118132.1 Protein Homology CDS 3797400 3798440 . + 0 ID=cds-WJG92504.1;Parent=gene-PUW35_18480;Dbxref=NCBI_GP:WJG92504.1;Name=WJG92504.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=PUW35_18480;product=TMAO reductase system periplasmic protein TorT;protein_id=WJG92504.1;transl_table=11 CP118132.1 Genbank gene 3798413 3799105 . - . ID=gene-PUW35_18485;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=PUW35_18485 CP118132.1 Protein Homology CDS 3798413 3799105 . - 0 ID=cds-WJG95143.1;Parent=gene-PUW35_18485;Dbxref=NCBI_GP:WJG95143.1;Name=WJG95143.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=PUW35_18485;product=two-component system response regulator TorR;protein_id=WJG95143.1;transl_table=11 CP118132.1 Genbank gene 3799235 3800419 . + . ID=gene-PUW35_18490;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=PUW35_18490 CP118132.1 Protein Homology CDS 3799235 3800419 . + 0 ID=cds-WJG92505.1;Parent=gene-PUW35_18490;Dbxref=NCBI_GP:WJG92505.1;Name=WJG92505.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=PUW35_18490;product=pentaheme c-type cytochrome TorC;protein_id=WJG92505.1;transl_table=11 CP118132.1 Genbank gene 3800409 3802961 . + . ID=gene-PUW35_18495;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=PUW35_18495 CP118132.1 Protein Homology CDS 3800409 3802961 . + 0 ID=cds-WJG92506.1;Parent=gene-PUW35_18495;Dbxref=NCBI_GP:WJG92506.1;Name=WJG92506.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=PUW35_18495;product=trimethylamine-N-oxide reductase TorA;protein_id=WJG92506.1;transl_table=11 CP118132.1 Genbank gene 3802954 3803586 . + . ID=gene-PUW35_18500;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=PUW35_18500 CP118132.1 Protein Homology CDS 3802954 3803586 . + 0 ID=cds-WJG92507.1;Parent=gene-PUW35_18500;Dbxref=NCBI_GP:WJG92507.1;Name=WJG92507.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=PUW35_18500;product=molecular chaperone TorD;protein_id=WJG92507.1;transl_table=11 CP118132.1 Genbank gene 3803783 3805174 . + . ID=gene-PUW35_18505;Name=PUW35_18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18505 CP118132.1 Protein Homology CDS 3803783 3805174 . + 0 ID=cds-WJG95144.1;Parent=gene-PUW35_18505;Dbxref=NCBI_GP:WJG95144.1;Name=WJG95144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=PUW35_18505;product=cytochrome-c peroxidase;protein_id=WJG95144.1;transl_table=11 CP118132.1 Genbank gene 3805180 3805797 . + . ID=gene-PUW35_18510;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PUW35_18510 CP118132.1 Protein Homology CDS 3805180 3805797 . + 0 ID=cds-WJG95145.1;Parent=gene-PUW35_18510;Dbxref=NCBI_GP:WJG95145.1;Name=WJG95145.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=PUW35_18510;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WJG95145.1;transl_table=11 CP118132.1 Genbank gene 3805794 3806453 . + . ID=gene-PUW35_18515;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PUW35_18515 CP118132.1 Protein Homology CDS 3805794 3806453 . + 0 ID=cds-WJG92508.1;Parent=gene-PUW35_18515;Dbxref=NCBI_GP:WJG92508.1;Name=WJG92508.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=PUW35_18515;product=heme exporter protein CcmB;protein_id=WJG92508.1;transl_table=11 CP118132.1 Genbank gene 3806505 3807242 . + . ID=gene-PUW35_18520;Name=PUW35_18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18520 CP118132.1 Protein Homology CDS 3806505 3807242 . + 0 ID=cds-WJG92509.1;Parent=gene-PUW35_18520;Dbxref=NCBI_GP:WJG92509.1;Name=WJG92509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=PUW35_18520;product=heme ABC transporter permease;protein_id=WJG92509.1;transl_table=11 CP118132.1 Genbank gene 3807239 3807451 . + . ID=gene-PUW35_18525;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PUW35_18525 CP118132.1 Protein Homology CDS 3807239 3807451 . + 0 ID=cds-WJG92510.1;Parent=gene-PUW35_18525;Dbxref=NCBI_GP:WJG92510.1;Name=WJG92510.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=PUW35_18525;product=heme exporter protein CcmD;protein_id=WJG92510.1;transl_table=11 CP118132.1 Genbank gene 3807448 3807927 . + . ID=gene-PUW35_18530;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PUW35_18530 CP118132.1 Protein Homology CDS 3807448 3807927 . + 0 ID=cds-WJG92511.1;Parent=gene-PUW35_18530;Dbxref=NCBI_GP:WJG92511.1;Name=WJG92511.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=PUW35_18530;product=cytochrome c maturation protein CcmE;protein_id=WJG92511.1;transl_table=11 CP118132.1 Genbank gene 3807924 3809855 . + . ID=gene-PUW35_18535;Name=PUW35_18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18535 CP118132.1 Protein Homology CDS 3807924 3809855 . + 0 ID=cds-WJG92512.1;Parent=gene-PUW35_18535;Dbxref=NCBI_GP:WJG92512.1;Name=WJG92512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=PUW35_18535;product=heme lyase CcmF/NrfE family subunit;protein_id=WJG92512.1;transl_table=11 CP118132.1 Genbank gene 3809852 3810409 . + . ID=gene-PUW35_18540;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PUW35_18540 CP118132.1 Protein Homology CDS 3809852 3810409 . + 0 ID=cds-WJG92513.1;Parent=gene-PUW35_18540;Dbxref=NCBI_GP:WJG92513.1;Name=WJG92513.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=PUW35_18540;product=thiol:disulfide interchange protein DsbE;protein_id=WJG92513.1;transl_table=11 CP118132.1 Genbank gene 3810406 3811458 . + . ID=gene-PUW35_18545;Name=PUW35_18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18545 CP118132.1 Protein Homology CDS 3810406 3811458 . + 0 ID=cds-WJG92514.1;Parent=gene-PUW35_18545;Dbxref=NCBI_GP:WJG92514.1;Name=WJG92514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=PUW35_18545;product=cytochrome c-type biogenesis protein CcmH;protein_id=WJG92514.1;transl_table=11 CP118132.1 Genbank gene 3811580 3812806 . + . ID=gene-PUW35_18550;Name=PUW35_18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18550 CP118132.1 Protein Homology CDS 3811580 3812806 . + 0 ID=cds-WJG92515.1;Parent=gene-PUW35_18550;Dbxref=NCBI_GP:WJG92515.1;Name=WJG92515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=PUW35_18550;product=DUF3748 domain-containing protein;protein_id=WJG92515.1;transl_table=11 CP118132.1 Genbank gene 3812808 3813140 . - . ID=gene-PUW35_18555;Name=PUW35_18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18555 CP118132.1 Protein Homology CDS 3812808 3813140 . - 0 ID=cds-WJG95146.1;Parent=gene-PUW35_18555;Dbxref=NCBI_GP:WJG95146.1;Name=WJG95146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=PUW35_18555;product=YceK/YidQ family lipoprotein;protein_id=WJG95146.1;transl_table=11 CP118132.1 cmsearch sequence_feature 3813383 3813456 . + . ID=id-CP118132.1:3813383..3813456;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118132.1 Genbank gene 3813450 3813863 . + . ID=gene-PUW35_18560;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=PUW35_18560 CP118132.1 Protein Homology CDS 3813450 3813863 . + 0 ID=cds-WJG92516.1;Parent=gene-PUW35_18560;Dbxref=NCBI_GP:WJG92516.1;Name=WJG92516.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=PUW35_18560;product=heat shock chaperone IbpA;protein_id=WJG92516.1;transl_table=11 CP118132.1 Genbank gene 3813973 3814401 . + . ID=gene-PUW35_18565;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=PUW35_18565 CP118132.1 Protein Homology CDS 3813973 3814401 . + 0 ID=cds-WJG92517.1;Parent=gene-PUW35_18565;Dbxref=NCBI_GP:WJG92517.1;Name=WJG92517.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=PUW35_18565;product=heat shock chaperone IbpB;protein_id=WJG92517.1;transl_table=11 CP118132.1 Genbank gene 3814589 3816565 . + . ID=gene-PUW35_18570;Name=PUW35_18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18570 CP118132.1 Protein Homology CDS 3814589 3816565 . + 0 ID=cds-WJG92518.1;Parent=gene-PUW35_18570;Dbxref=NCBI_GP:WJG92518.1;Name=WJG92518.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF003007.0;locus_tag=PUW35_18570;product=putative transporter;protein_id=WJG92518.1;transl_table=11 CP118132.1 Genbank gene 3816685 3817032 . + . ID=gene-PUW35_18575;Name=PUW35_18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18575 CP118132.1 Protein Homology CDS 3816685 3817032 . + 0 ID=cds-WJG92519.1;Parent=gene-PUW35_18575;Dbxref=NCBI_GP:WJG92519.1;Name=WJG92519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=PUW35_18575;product=YidH family protein;protein_id=WJG92519.1;transl_table=11 CP118132.1 Genbank gene 3817022 3817384 . + . ID=gene-PUW35_18580;Name=PUW35_18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18580 CP118132.1 Protein Homology CDS 3817022 3817384 . + 0 ID=cds-WJG92520.1;Parent=gene-PUW35_18580;Dbxref=NCBI_GP:WJG92520.1;Name=WJG92520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=PUW35_18580;product=DUF202 domain-containing protein;protein_id=WJG92520.1;transl_table=11 CP118132.1 Genbank gene 3817381 3817911 . + . ID=gene-PUW35_18585;Name=PUW35_18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18585 CP118132.1 Protein Homology CDS 3817381 3817911 . + 0 ID=cds-WJG92521.1;Parent=gene-PUW35_18585;Dbxref=NCBI_GP:WJG92521.1;Name=WJG92521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=PUW35_18585;product=radical SAM protein;protein_id=WJG92521.1;transl_table=11 CP118132.1 Genbank gene 3817993 3819315 . - . ID=gene-PUW35_18590;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=PUW35_18590 CP118132.1 Protein Homology CDS 3817993 3819315 . - 0 ID=cds-WJG92522.1;Parent=gene-PUW35_18590;Dbxref=NCBI_GP:WJG92522.1;Name=WJG92522.1;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=PUW35_18590;product=D-serine ammonia-lyase;protein_id=WJG92522.1;transl_table=11 CP118132.1 Genbank gene 3819333 3820670 . - . ID=gene-PUW35_18595;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=PUW35_18595 CP118132.1 Protein Homology CDS 3819333 3820670 . - 0 ID=cds-WJG92523.1;Parent=gene-PUW35_18595;Dbxref=NCBI_GP:WJG92523.1;Name=WJG92523.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=PUW35_18595;product=D-serine transporter DsdX;protein_id=WJG92523.1;transl_table=11 CP118132.1 Genbank gene 3820896 3821819 . + . ID=gene-PUW35_18600;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=PUW35_18600 CP118132.1 Protein Homology CDS 3820896 3821819 . + 0 ID=cds-WJG95147.1;Parent=gene-PUW35_18600;Dbxref=NCBI_GP:WJG95147.1;Name=WJG95147.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=PUW35_18600;product=DNA-binding transcriptional regulator DsdC;protein_id=WJG95147.1;transl_table=11 CP118132.1 Genbank pseudogene 3821883 3822967 . + . ID=gene-PUW35_18605;Name=PUW35_18605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18605;pseudo=true CP118132.1 Protein Homology CDS 3821883 3822967 . + 0 ID=cds-PUW35_18605;Parent=gene-PUW35_18605;Note=frameshifted;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=PUW35_18605;product=cellulase family glycosylhydrolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3822894 3824078 . - . ID=gene-PUW35_18610;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=PUW35_18610 CP118132.1 Protein Homology CDS 3822894 3824078 . - 0 ID=cds-WJG92524.1;Parent=gene-PUW35_18610;Dbxref=NCBI_GP:WJG92524.1;Name=WJG92524.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=PUW35_18610;product=multidrug efflux MFS transporter EmrD;protein_id=WJG92524.1;transl_table=11 CP118132.1 Genbank gene 3824281 3825141 . - . ID=gene-PUW35_18615;Name=PUW35_18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18615 CP118132.1 Protein Homology CDS 3824281 3825141 . - 0 ID=cds-WJG92525.1;Parent=gene-PUW35_18615;Dbxref=NCBI_GP:WJG92525.1;Name=WJG92525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=PUW35_18615;product=DMT family transporter;protein_id=WJG92525.1;transl_table=11 CP118132.1 Genbank gene 3825234 3825323 . - . ID=gene-PUW35_18620;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=PUW35_18620 CP118132.1 Protein Homology CDS 3825234 3825323 . - 0 ID=cds-WJG92526.1;Parent=gene-PUW35_18620;Dbxref=NCBI_GP:WJG92526.1;Name=WJG92526.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=PUW35_18620;product=type I toxin-antitoxin system toxin TisB;protein_id=WJG92526.1;transl_table=11 CP118132.1 Genbank pseudogene 3825320 3825434 . - . ID=gene-PUW35_18625;Name=PUW35_18625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18625;pseudo=true CP118132.1 Protein Homology CDS 3825320 3825434 . - 0 ID=cds-PUW35_18625;Parent=gene-PUW35_18625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=PUW35_18625;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3825957 3826055 . + . ID=gene-PUW35_18630;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=PUW35_18630 CP118132.1 Protein Homology CDS 3825957 3826055 . + 0 ID=cds-WJG92527.1;Parent=gene-PUW35_18630;Dbxref=NCBI_GP:WJG92527.1;Name=WJG92527.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=PUW35_18630;product=ilvB operon leader peptide IvbL;protein_id=WJG92527.1;transl_table=11 CP118132.1 Genbank pseudogene 3826162 3827849 . + . ID=gene-PUW35_18635;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=pseudogene;locus_tag=PUW35_18635;pseudo=true CP118132.1 Protein Homology CDS 3826162 3827849 . + 0 ID=cds-PUW35_18635;Parent=gene-PUW35_18635;Note=frameshifted;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=PUW35_18635;product=acetolactate synthase large subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3827853 3828143 . + . ID=gene-PUW35_18640;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PUW35_18640 CP118132.1 Protein Homology CDS 3827853 3828143 . + 0 ID=cds-WJG92528.1;Parent=gene-PUW35_18640;Dbxref=NCBI_GP:WJG92528.1;Name=WJG92528.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=PUW35_18640;product=acetolactate synthase small subunit;protein_id=WJG92528.1;transl_table=11 CP118132.1 Genbank pseudogene 3828145 3828929 . - . ID=gene-PUW35_18645;Name=PUW35_18645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18645;pseudo=true CP118132.1 Protein Homology CDS 3828145 3828929 . - 0 ID=cds-PUW35_18645;Parent=gene-PUW35_18645;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=PUW35_18645;product=DeoR family transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3829254 3830174 . + . ID=gene-PUW35_18650;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=PUW35_18650 CP118132.1 Protein Homology CDS 3829254 3830174 . + 0 ID=cds-WJG92529.1;Parent=gene-PUW35_18650;Dbxref=NCBI_GP:WJG92529.1;Name=WJG92529.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=PUW35_18650;product=ribokinase;protein_id=WJG92529.1;transl_table=11 CP118132.1 Genbank gene 3830205 3831521 . + . ID=gene-PUW35_18655;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PUW35_18655 CP118132.1 Protein Homology CDS 3830205 3831521 . + 0 ID=cds-WJG92530.1;Parent=gene-PUW35_18655;Dbxref=NCBI_GP:WJG92530.1;Name=WJG92530.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=PUW35_18655;product=L-fucose:H+ symporter permease;protein_id=WJG92530.1;transl_table=11 CP118132.1 Genbank gene 3831533 3832546 . + . ID=gene-PUW35_18660;Name=PUW35_18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18660 CP118132.1 Protein Homology CDS 3831533 3832546 . + 0 ID=cds-WJG92531.1;Parent=gene-PUW35_18660;Dbxref=NCBI_GP:WJG92531.1;Name=WJG92531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=PUW35_18660;product=aldose 1-epimerase family protein;protein_id=WJG92531.1;transl_table=11 CP118132.1 Genbank gene 3832700 3833290 . + . ID=gene-PUW35_18665;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=PUW35_18665 CP118132.1 Protein Homology CDS 3832700 3833290 . + 0 ID=cds-WJG92532.1;Parent=gene-PUW35_18665;Dbxref=NCBI_GP:WJG92532.1;Name=WJG92532.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=PUW35_18665;product=transcriptional regulator UhpA;protein_id=WJG92532.1;transl_table=11 CP118132.1 Genbank gene 3833290 3834792 . + . ID=gene-PUW35_18670;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=PUW35_18670 CP118132.1 Protein Homology CDS 3833290 3834792 . + 0 ID=cds-WJG92533.1;Parent=gene-PUW35_18670;Dbxref=NCBI_GP:WJG92533.1;Name=WJG92533.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=PUW35_18670;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WJG92533.1;transl_table=11 CP118132.1 Genbank pseudogene 3834802 3836129 . + . ID=gene-PUW35_18675;Name=PUW35_18675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18675;pseudo=true CP118132.1 Protein Homology CDS 3834802 3836129 . + 0 ID=cds-PUW35_18675;Parent=gene-PUW35_18675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=PUW35_18675;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3836272 3837651 . + . ID=gene-PUW35_18680;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=PUW35_18680 CP118132.1 Protein Homology CDS 3836272 3837651 . + 0 ID=cds-WJG92534.1;Parent=gene-PUW35_18680;Dbxref=NCBI_GP:WJG92534.1;Name=WJG92534.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=PUW35_18680;product=hexose-6-phosphate:phosphate antiporter;protein_id=WJG92534.1;transl_table=11 CP118132.1 Genbank gene 3837844 3838296 . + . ID=gene-PUW35_18685;Name=PUW35_18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18685 CP118132.1 Protein Homology CDS 3837844 3838296 . + 0 ID=cds-WJG92535.1;Parent=gene-PUW35_18685;Dbxref=NCBI_GP:WJG92535.1;Name=WJG92535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=PUW35_18685;product=DUF1198 domain-containing protein;protein_id=WJG92535.1;transl_table=11 CP118132.1 Genbank gene 3838729 3839052 . - . ID=gene-PUW35_18690;Name=PUW35_18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18690 CP118132.1 Protein Homology CDS 3838729 3839052 . - 0 ID=cds-WJG92536.1;Parent=gene-PUW35_18690;Dbxref=NCBI_GP:WJG92536.1;Name=WJG92536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=PUW35_18690;product=DNA-binding transcriptional regulator;protein_id=WJG92536.1;transl_table=11 CP118132.1 Genbank gene 3839036 3839395 . - . ID=gene-PUW35_18695;Name=PUW35_18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18695 CP118132.1 Protein Homology CDS 3839036 3839395 . - 0 ID=cds-WJG92537.1;Parent=gene-PUW35_18695;Dbxref=NCBI_GP:WJG92537.1;Name=WJG92537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=PUW35_18695;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG92537.1;transl_table=11 CP118132.1 Genbank gene 3839611 3840804 . + . ID=gene-PUW35_18700;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=PUW35_18700 CP118132.1 Protein Homology CDS 3839611 3840804 . + 0 ID=cds-WJG92538.1;Parent=gene-PUW35_18700;Dbxref=NCBI_GP:WJG92538.1;Name=WJG92538.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=PUW35_18700;product=purine ribonucleoside efflux pump NepI;protein_id=WJG92538.1;transl_table=11 CP118132.1 Genbank gene 3840864 3842246 . - . ID=gene-PUW35_18705;Name=PUW35_18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18705 CP118132.1 Protein Homology CDS 3840864 3842246 . - 0 ID=cds-WJG92539.1;Parent=gene-PUW35_18705;Dbxref=NCBI_GP:WJG92539.1;Name=WJG92539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=PUW35_18705;product=glycoside hydrolase family 1 protein;protein_id=WJG92539.1;transl_table=11 CP118132.1 Genbank gene 3842352 3842645 . - . ID=gene-PUW35_18710;Name=PUW35_18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18710 CP118132.1 Protein Homology CDS 3842352 3842645 . - 0 ID=cds-WJG92540.1;Parent=gene-PUW35_18710;Dbxref=NCBI_GP:WJG92540.1;Name=WJG92540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=PUW35_18710;product=hypothetical protein;protein_id=WJG92540.1;transl_table=11 CP118132.1 Genbank gene 3842842 3845640 . + . ID=gene-PUW35_18715;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=PUW35_18715 CP118132.1 Protein Homology CDS 3842842 3845640 . + 0 ID=cds-WJG92541.1;Parent=gene-PUW35_18715;Dbxref=NCBI_GP:WJG92541.1;Name=WJG92541.1;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=PUW35_18715;product=transcriptional regulator DagR;protein_id=WJG92541.1;transl_table=11 CP118132.1 Genbank gene 3845859 3846284 . + . ID=gene-PUW35_18720;Name=PUW35_18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18720 CP118132.1 Protein Homology CDS 3845859 3846284 . + 0 ID=cds-WJG92542.1;Parent=gene-PUW35_18720;Dbxref=NCBI_GP:WJG92542.1;Name=WJG92542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=PUW35_18720;product=PTS sugar transporter subunit IIA;protein_id=WJG92542.1;transl_table=11 CP118132.1 Genbank gene 3846295 3846780 . + . ID=gene-PUW35_18725;Name=PUW35_18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18725 CP118132.1 Protein Homology CDS 3846295 3846780 . + 0 ID=cds-WJG92543.1;Parent=gene-PUW35_18725;Dbxref=NCBI_GP:WJG92543.1;Name=WJG92543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=PUW35_18725;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WJG92543.1;transl_table=11 CP118132.1 Genbank gene 3846926 3847675 . + . ID=gene-PUW35_18730;Name=PUW35_18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18730 CP118132.1 Protein Homology CDS 3846926 3847675 . + 0 ID=cds-WJG92544.1;Parent=gene-PUW35_18730;Dbxref=NCBI_GP:WJG92544.1;Name=WJG92544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=PUW35_18730;product=PTS sugar transporter subunit IIC;protein_id=WJG92544.1;transl_table=11 CP118132.1 Genbank gene 3847672 3848532 . + . ID=gene-PUW35_18735;Name=PUW35_18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18735 CP118132.1 Protein Homology CDS 3847672 3848532 . + 0 ID=cds-WJG92545.1;Parent=gene-PUW35_18735;Dbxref=NCBI_GP:WJG92545.1;Name=WJG92545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=PUW35_18735;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WJG92545.1;transl_table=11 CP118132.1 Genbank gene 3848536 3849645 . + . ID=gene-PUW35_18740;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=PUW35_18740 CP118132.1 Protein Homology CDS 3848536 3849645 . + 0 ID=cds-WJG92546.1;Parent=gene-PUW35_18740;Dbxref=NCBI_GP:WJG92546.1;Name=WJG92546.1;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=PUW35_18740;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WJG92546.1;transl_table=11 CP118132.1 Genbank gene 3849632 3850375 . + . ID=gene-PUW35_18745;Name=PUW35_18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18745 CP118132.1 Protein Homology CDS 3849632 3850375 . + 0 ID=cds-WJG92547.1;Parent=gene-PUW35_18745;Dbxref=NCBI_GP:WJG92547.1;Name=WJG92547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=PUW35_18745;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WJG92547.1;transl_table=11 CP118132.1 Genbank gene 3850611 3851552 . + . ID=gene-PUW35_18750;Name=PUW35_18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18750 CP118132.1 Protein Homology CDS 3850611 3851552 . + 0 ID=cds-WJG92548.1;Parent=gene-PUW35_18750;Dbxref=NCBI_GP:WJG92548.1;Name=WJG92548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=PUW35_18750;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG92548.1;transl_table=11 CP118132.1 Genbank pseudogene 3851595 3852489 . - . ID=gene-PUW35_18755;Name=PUW35_18755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18755;pseudo=true CP118132.1 Protein Homology CDS 3851595 3852489 . - 0 ID=cds-PUW35_18755;Parent=gene-PUW35_18755;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=PUW35_18755;product=EamA family transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3853001 3853696 . + . ID=gene-PUW35_18760;Name=PUW35_18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18760 CP118132.1 Protein Homology CDS 3853001 3853696 . + 0 ID=cds-WJG92549.1;Parent=gene-PUW35_18760;Dbxref=NCBI_GP:WJG92549.1;Name=WJG92549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=PUW35_18760;product=MgtC family protein;protein_id=WJG92549.1;transl_table=11 CP118132.1 Genbank gene 3853916 3856642 . + . ID=gene-PUW35_18765;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PUW35_18765 CP118132.1 Protein Homology CDS 3853916 3856642 . + 0 ID=cds-WJG92550.1;Parent=gene-PUW35_18765;Dbxref=NCBI_GP:WJG92550.1;Name=WJG92550.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=PUW35_18765;product=magnesium-translocating P-type ATPase;protein_id=WJG92550.1;transl_table=11 CP118132.1 Genbank gene 3856664 3856756 . + . ID=gene-PUW35_18770;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=PUW35_18770 CP118132.1 Protein Homology CDS 3856664 3856756 . + 0 ID=cds-WJG92551.1;Parent=gene-PUW35_18770;Dbxref=NCBI_GP:WJG92551.1;Name=WJG92551.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=PUW35_18770;product=protein MgtR;protein_id=WJG92551.1;transl_table=11 CP118132.1 Genbank gene 3856769 3856855 . + . ID=gene-PUW35_18775;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=PUW35_18775 CP118132.1 Protein Homology CDS 3856769 3856855 . + 0 ID=cds-WJG95148.1;Parent=gene-PUW35_18775;Dbxref=NCBI_GP:WJG95148.1;Name=WJG95148.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=PUW35_18775;product=magnesium transporter protection protein MgtU;protein_id=WJG95148.1;transl_table=11 CP118132.1 Genbank gene 3856957 3857394 . + . ID=gene-PUW35_18780;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=PUW35_18780 CP118132.1 Protein Homology CDS 3856957 3857394 . + 0 ID=cds-WJG92552.1;Parent=gene-PUW35_18780;Dbxref=NCBI_GP:WJG92552.1;Name=WJG92552.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210795.1;locus_tag=PUW35_18780;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WJG92552.1;transl_table=11 CP118132.1 Genbank gene 3857562 3858242 . - . ID=gene-PUW35_18785;Name=PUW35_18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18785 CP118132.1 Protein Homology CDS 3857562 3858242 . - 0 ID=cds-WJG92553.1;Parent=gene-PUW35_18785;Dbxref=NCBI_GP:WJG92553.1;Name=WJG92553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=PUW35_18785;product=isochorismatase family protein;protein_id=WJG92553.1;transl_table=11 CP118132.1 Genbank pseudogene 3859026 3859882 . + . ID=gene-PUW35_18790;Name=PUW35_18790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18790;pseudo=true CP118132.1 Protein Homology CDS 3859026 3859882 . + 0 ID=cds-PUW35_18790;Parent=gene-PUW35_18790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=PUW35_18790;product=transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3859893 3860357 . + . ID=gene-PUW35_18795;Name=PUW35_18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18795 CP118132.1 Protein Homology CDS 3859893 3860357 . + 0 ID=cds-WJG95149.1;Parent=gene-PUW35_18795;Dbxref=NCBI_GP:WJG95149.1;Name=WJG95149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=PUW35_18795;product=hypothetical protein;protein_id=WJG95149.1;transl_table=11 CP118132.1 Genbank gene 3860452 3863319 . - . ID=gene-PUW35_18800;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=PUW35_18800 CP118132.1 Protein Homology CDS 3860452 3863319 . - 0 ID=cds-WJG92554.1;Parent=gene-PUW35_18800;Dbxref=NCBI_GP:WJG92554.1;Name=WJG92554.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=PUW35_18800;product=intestinal colonization autotransporter adhesin MisL;protein_id=WJG92554.1;transl_table=11 CP118132.1 Genbank gene 3863394 3864011 . - . ID=gene-PUW35_18805;Name=PUW35_18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18805 CP118132.1 Protein Homology CDS 3863394 3864011 . - 0 ID=cds-WJG92555.1;Parent=gene-PUW35_18805;Dbxref=NCBI_GP:WJG92555.1;Name=WJG92555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=PUW35_18805;product=helix-turn-helix transcriptional regulator;protein_id=WJG92555.1;transl_table=11 CP118132.1 Genbank pseudogene 3865025 3865156 . + . ID=gene-PUW35_18810;Name=PUW35_18810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18810;pseudo=true CP118132.1 Protein Homology CDS 3865025 3865156 . + 0 ID=cds-PUW35_18810;Parent=gene-PUW35_18810;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=PUW35_18810;product=transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3865310 3866347 . - . ID=gene-PUW35_18815;Name=PUW35_18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18815 CP118132.1 Protein Homology CDS 3865310 3866347 . - 0 ID=cds-WJG92556.1;Parent=gene-PUW35_18815;Dbxref=NCBI_GP:WJG92556.1;Name=WJG92556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=PUW35_18815;product=virulence RhuM family protein;protein_id=WJG92556.1;transl_table=11 CP118132.1 Genbank pseudogene 3866435 3866851 . - . ID=gene-PUW35_18820;Name=PUW35_18820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18820;pseudo=true CP118132.1 Protein Homology CDS 3866435 3866851 . - 0 ID=cds-PUW35_18820;Parent=gene-PUW35_18820;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=PUW35_18820;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3866881 3868066 . - . ID=gene-PUW35_18825;Name=PUW35_18825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18825;pseudo=true CP118132.1 Protein Homology CDS 3866881 3868066 . - 0 ID=cds-PUW35_18825;Parent=gene-PUW35_18825;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462652.1;locus_tag=PUW35_18825;product=AAA family ATPase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3868183 3868311 . - . ID=gene-PUW35_18830;Name=PUW35_18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18830 CP118132.1 Protein Homology CDS 3868183 3868311 . - 0 ID=cds-WJG95150.1;Parent=gene-PUW35_18830;Dbxref=NCBI_GP:WJG95150.1;Name=WJG95150.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018465.2;locus_tag=PUW35_18830;product=toxin;protein_id=WJG95150.1;transl_table=11 CP118132.1 Genbank gene 3868756 3869100 . + . ID=gene-PUW35_18835;Name=PUW35_18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18835 CP118132.1 Protein Homology CDS 3868756 3869100 . + 0 ID=cds-WJG92557.1;Parent=gene-PUW35_18835;Dbxref=NCBI_GP:WJG92557.1;Name=WJG92557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=PUW35_18835;product=hypothetical protein;protein_id=WJG92557.1;transl_table=11 CP118132.1 Genbank gene 3869417 3869511 . - . ID=gene-PUW35_18840;Name=PUW35_18840;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_18840 CP118132.1 tRNAscan-SE tRNA 3869417 3869511 . - . ID=rna-PUW35_18840;Parent=gene-PUW35_18840;anticodon=(pos:complement(3869475..3869477));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18840;product=tRNA-Sec CP118132.1 tRNAscan-SE exon 3869417 3869511 . - . ID=exon-PUW35_18840-1;Parent=rna-PUW35_18840;anticodon=(pos:complement(3869475..3869477));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_18840;product=tRNA-Sec CP118132.1 Genbank pseudogene 3869799 3871180 . + . ID=gene-PUW35_18845;Name=PUW35_18845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_18845;pseudo=true CP118132.1 Protein Homology CDS 3869799 3871180 . + 0 ID=cds-PUW35_18845;Parent=gene-PUW35_18845;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=PUW35_18845;product=glycoside-pentoside-hexuronide family transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3871192 3873510 . + . ID=gene-PUW35_18850;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=PUW35_18850 CP118132.1 Protein Homology CDS 3871192 3873510 . + 0 ID=cds-WJG92558.1;Parent=gene-PUW35_18850;Dbxref=NCBI_GP:WJG92558.1;Name=WJG92558.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=PUW35_18850;product=alpha-xylosidase;protein_id=WJG92558.1;transl_table=11 CP118132.1 Genbank gene 3873613 3875322 . - . ID=gene-PUW35_18855;Name=PUW35_18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18855 CP118132.1 Protein Homology CDS 3873613 3875322 . - 0 ID=cds-WJG92559.1;Parent=gene-PUW35_18855;Dbxref=NCBI_GP:WJG92559.1;Name=WJG92559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=PUW35_18855;product=AsmA family protein;protein_id=WJG92559.1;transl_table=11 CP118132.1 Genbank gene 3875443 3876834 . - . ID=gene-PUW35_18860;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=PUW35_18860 CP118132.1 Protein Homology CDS 3875443 3876834 . - 0 ID=cds-WJG92560.1;Parent=gene-PUW35_18860;Dbxref=NCBI_GP:WJG92560.1;Name=WJG92560.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=PUW35_18860;product=xanthine/proton symporter XanP;protein_id=WJG92560.1;transl_table=11 CP118132.1 Genbank gene 3877062 3878267 . + . ID=gene-PUW35_18865;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=PUW35_18865 CP118132.1 Protein Homology CDS 3877062 3878267 . + 0 ID=cds-WJG92561.1;Parent=gene-PUW35_18865;Dbxref=NCBI_GP:WJG92561.1;Name=WJG92561.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=PUW35_18865;product=sodium/glutamate symporter;protein_id=WJG92561.1;transl_table=11 CP118132.1 Genbank gene 3878303 3880384 . - . ID=gene-PUW35_18870;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=PUW35_18870 CP118132.1 Protein Homology CDS 3878303 3880384 . - 0 ID=cds-WJG92562.1;Parent=gene-PUW35_18870;Dbxref=NCBI_GP:WJG92562.1;Name=WJG92562.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=PUW35_18870;product=ATP-dependent DNA helicase RecG;protein_id=WJG92562.1;transl_table=11 CP118132.1 Genbank gene 3880390 3881079 . - . ID=gene-PUW35_18875;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=PUW35_18875 CP118132.1 Protein Homology CDS 3880390 3881079 . - 0 ID=cds-WJG92563.1;Parent=gene-PUW35_18875;Dbxref=NCBI_GP:WJG92563.1;Name=WJG92563.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=PUW35_18875;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WJG92563.1;transl_table=11 CP118132.1 Genbank gene 3881084 3883195 . - . ID=gene-PUW35_18880;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=PUW35_18880 CP118132.1 Protein Homology CDS 3881084 3883195 . - 0 ID=cds-WJG92564.1;Parent=gene-PUW35_18880;Dbxref=NCBI_GP:WJG92564.1;Name=WJG92564.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=PUW35_18880;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WJG92564.1;transl_table=11 CP118132.1 Genbank gene 3883214 3883489 . - . ID=gene-PUW35_18885;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=PUW35_18885 CP118132.1 Protein Homology CDS 3883214 3883489 . - 0 ID=cds-WJG92565.1;Parent=gene-PUW35_18885;Dbxref=NCBI_GP:WJG92565.1;Name=WJG92565.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=PUW35_18885;product=DNA-directed RNA polymerase subunit omega;protein_id=WJG92565.1;transl_table=11 CP118132.1 Genbank pseudogene 3883544 3884166 . - . ID=gene-PUW35_18890;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=pseudogene;locus_tag=PUW35_18890;pseudo=true CP118132.1 Protein Homology CDS 3883544 3884166 . - 0 ID=cds-PUW35_18890;Parent=gene-PUW35_18890;Note=frameshifted;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=PUW35_18890;product=guanylate kinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3884423 3886108 . + . ID=gene-PUW35_18895;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=PUW35_18895 CP118132.1 Protein Homology CDS 3884423 3886108 . + 0 ID=cds-WJG92566.1;Parent=gene-PUW35_18895;Dbxref=NCBI_GP:WJG92566.1;Name=WJG92566.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=PUW35_18895;product=NAD-dependent DNA ligase LigB;protein_id=WJG92566.1;transl_table=11 CP118132.1 Genbank gene 3886105 3886722 . - . ID=gene-PUW35_18900;Name=PUW35_18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18900 CP118132.1 Protein Homology CDS 3886105 3886722 . - 0 ID=cds-WJG92567.1;Parent=gene-PUW35_18900;Dbxref=NCBI_GP:WJG92567.1;Name=WJG92567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=PUW35_18900;product=trimeric intracellular cation channel family protein;protein_id=WJG92567.1;transl_table=11 CP118132.1 Genbank gene 3886973 3887854 . - . ID=gene-PUW35_18905;Name=PUW35_18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18905 CP118132.1 Protein Homology CDS 3886973 3887854 . - 0 ID=cds-WJG92568.1;Parent=gene-PUW35_18905;Dbxref=NCBI_GP:WJG92568.1;Name=WJG92568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=PUW35_18905;product=HARLDQ motif MBL-fold protein;protein_id=WJG92568.1;transl_table=11 CP118132.1 Genbank gene 3887928 3888830 . + . ID=gene-PUW35_18910;Name=PUW35_18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18910 CP118132.1 Protein Homology CDS 3887928 3888830 . + 0 ID=cds-WJG92569.1;Parent=gene-PUW35_18910;Dbxref=NCBI_GP:WJG92569.1;Name=WJG92569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=PUW35_18910;product=LysR family transcriptional regulator;protein_id=WJG92569.1;transl_table=11 CP118132.1 Genbank gene 3888880 3889743 . - . ID=gene-PUW35_18915;Name=PUW35_18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18915 CP118132.1 Protein Homology CDS 3888880 3889743 . - 0 ID=cds-WJG92570.1;Parent=gene-PUW35_18915;Dbxref=NCBI_GP:WJG92570.1;Name=WJG92570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=PUW35_18915;product=YicC family protein;protein_id=WJG92570.1;transl_table=11 CP118132.1 Genbank gene 3889869 3890585 . + . ID=gene-PUW35_18920;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=PUW35_18920 CP118132.1 Protein Homology CDS 3889869 3890585 . + 0 ID=cds-WJG92571.1;Parent=gene-PUW35_18920;Dbxref=NCBI_GP:WJG92571.1;Name=WJG92571.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=PUW35_18920;product=ribonuclease PH;protein_id=WJG92571.1;transl_table=11 CP118132.1 Genbank gene 3890664 3891305 . + . ID=gene-PUW35_18925;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=PUW35_18925 CP118132.1 Protein Homology CDS 3890664 3891305 . + 0 ID=cds-WJG92572.1;Parent=gene-PUW35_18925;Dbxref=NCBI_GP:WJG92572.1;Name=WJG92572.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=PUW35_18925;product=orotate phosphoribosyltransferase;protein_id=WJG92572.1;transl_table=11 CP118132.1 Genbank gene 3891383 3891979 . - . ID=gene-PUW35_18930;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=PUW35_18930 CP118132.1 Protein Homology CDS 3891383 3891979 . - 0 ID=cds-WJG92573.1;Parent=gene-PUW35_18930;Dbxref=NCBI_GP:WJG92573.1;Name=WJG92573.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=PUW35_18930;product=nucleoid occlusion factor SlmA;protein_id=WJG92573.1;transl_table=11 CP118132.1 Genbank gene 3892087 3892545 . - . ID=gene-PUW35_18935;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=PUW35_18935 CP118132.1 Protein Homology CDS 3892087 3892545 . - 0 ID=cds-WJG92574.1;Parent=gene-PUW35_18935;Dbxref=NCBI_GP:WJG92574.1;Name=WJG92574.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=PUW35_18935;product=dUTP diphosphatase;protein_id=WJG92574.1;transl_table=11 CP118132.1 Genbank gene 3892523 3893743 . - . ID=gene-PUW35_18940;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=PUW35_18940 CP118132.1 Protein Homology CDS 3892523 3893743 . - 0 ID=cds-WJG95151.1;Parent=gene-PUW35_18940;Dbxref=NCBI_GP:WJG95151.1;Name=WJG95151.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=PUW35_18940;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WJG95151.1;transl_table=11 CP118132.1 Genbank gene 3893919 3894584 . + . ID=gene-PUW35_18945;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PUW35_18945 CP118132.1 Protein Homology CDS 3893919 3894584 . + 0 ID=cds-WJG92575.1;Parent=gene-PUW35_18945;Dbxref=NCBI_GP:WJG92575.1;Name=WJG92575.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=PUW35_18945;product=DNA repair protein RadC;protein_id=WJG92575.1;transl_table=11 CP118132.1 Genbank gene 3894802 3895038 . + . ID=gene-PUW35_18950;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=PUW35_18950 CP118132.1 Protein Homology CDS 3894802 3895038 . + 0 ID=cds-WJG92576.1;Parent=gene-PUW35_18950;Dbxref=NCBI_GP:WJG92576.1;Name=WJG92576.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=PUW35_18950;product=50S ribosomal protein L28;protein_id=WJG92576.1;transl_table=11 CP118132.1 Genbank gene 3895059 3895226 . + . ID=gene-PUW35_18955;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PUW35_18955 CP118132.1 Protein Homology CDS 3895059 3895226 . + 0 ID=cds-WJG92577.1;Parent=gene-PUW35_18955;Dbxref=NCBI_GP:WJG92577.1;Name=WJG92577.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=PUW35_18955;product=50S ribosomal protein L33;protein_id=WJG92577.1;transl_table=11 CP118132.1 Genbank gene 3895324 3896133 . + . ID=gene-PUW35_18960;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=PUW35_18960 CP118132.1 Protein Homology CDS 3895324 3896133 . + 0 ID=cds-WJG92578.1;Parent=gene-PUW35_18960;Dbxref=NCBI_GP:WJG92578.1;Name=WJG92578.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=PUW35_18960;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WJG92578.1;transl_table=11 CP118132.1 Genbank gene 3896161 3896640 . - . ID=gene-PUW35_18965;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=PUW35_18965 CP118132.1 Protein Homology CDS 3896161 3896640 . - 0 ID=cds-WJG92579.1;Parent=gene-PUW35_18965;Dbxref=NCBI_GP:WJG92579.1;Name=WJG92579.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=PUW35_18965;product=pantetheine-phosphate adenylyltransferase;protein_id=WJG92579.1;transl_table=11 CP118132.1 Genbank gene 3896649 3897926 . - . ID=gene-PUW35_18970;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=PUW35_18970 CP118132.1 Protein Homology CDS 3896649 3897926 . - 0 ID=cds-WJG92580.1;Parent=gene-PUW35_18970;Dbxref=NCBI_GP:WJG92580.1;Name=WJG92580.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=PUW35_18970;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WJG92580.1;transl_table=11 CP118132.1 Genbank gene 3898335 3899405 . + . ID=gene-PUW35_18975;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=PUW35_18975 CP118132.1 Protein Homology CDS 3898335 3899405 . + 0 ID=cds-WJG92581.1;Parent=gene-PUW35_18975;Dbxref=NCBI_GP:WJG92581.1;Name=WJG92581.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=PUW35_18975;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WJG92581.1;transl_table=11 CP118132.1 Genbank gene 3899402 3900526 . + . ID=gene-PUW35_18980;Name=PUW35_18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18980 CP118132.1 Protein Homology CDS 3899402 3900526 . + 0 ID=cds-WJG92582.1;Parent=gene-PUW35_18980;Dbxref=NCBI_GP:WJG92582.1;Name=WJG92582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=PUW35_18980;product=glycosyltransferase family 4 protein;protein_id=WJG92582.1;transl_table=11 CP118132.1 Genbank gene 3900519 3901316 . + . ID=gene-PUW35_18985;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=PUW35_18985 CP118132.1 Protein Homology CDS 3900519 3901316 . + 0 ID=cds-WJG92583.1;Parent=gene-PUW35_18985;Dbxref=NCBI_GP:WJG92583.1;Name=WJG92583.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=PUW35_18985;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WJG92583.1;transl_table=11 CP118132.1 Genbank gene 3901372 3901581 . + . ID=gene-PUW35_18990;Name=PUW35_18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_18990 CP118132.1 GeneMarkS-2+ CDS 3901372 3901581 . + 0 ID=cds-WJG92584.1;Parent=gene-PUW35_18990;Dbxref=NCBI_GP:WJG92584.1;Name=WJG92584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_18990;product=hypothetical protein;protein_id=WJG92584.1;transl_table=11 CP118132.1 Genbank gene 3901651 3902730 . + . ID=gene-PUW35_18995;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=PUW35_18995 CP118132.1 Protein Homology CDS 3901651 3902730 . + 0 ID=cds-WJG92585.1;Parent=gene-PUW35_18995;Dbxref=NCBI_GP:WJG92585.1;Name=WJG92585.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=PUW35_18995;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WJG92585.1;transl_table=11 CP118132.1 Genbank gene 3902736 3903749 . + . ID=gene-PUW35_19000;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=PUW35_19000 CP118132.1 Protein Homology CDS 3902736 3903749 . + 0 ID=cds-WJG92586.1;Parent=gene-PUW35_19000;Dbxref=NCBI_GP:WJG92586.1;Name=WJG92586.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=PUW35_19000;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WJG92586.1;transl_table=11 CP118132.1 Genbank gene 3903767 3904780 . + . ID=gene-PUW35_19005;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=PUW35_19005 CP118132.1 Protein Homology CDS 3903767 3904780 . + 0 ID=cds-WJG92587.1;Parent=gene-PUW35_19005;Dbxref=NCBI_GP:WJG92587.1;Name=WJG92587.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=PUW35_19005;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WJG92587.1;transl_table=11 CP118132.1 Genbank gene 3904803 3905501 . + . ID=gene-PUW35_19010;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=PUW35_19010 CP118132.1 Protein Homology CDS 3904803 3905501 . + 0 ID=cds-WJG92588.1;Parent=gene-PUW35_19010;Dbxref=NCBI_GP:WJG92588.1;Name=WJG92588.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=PUW35_19010;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WJG92588.1;transl_table=11 CP118132.1 Genbank pseudogene 3905651 3906459 . + . ID=gene-PUW35_19015;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=pseudogene;locus_tag=PUW35_19015;pseudo=true CP118132.1 Protein Homology CDS 3905651 3906459 . + 0 ID=cds-PUW35_19015;Parent=gene-PUW35_19015;Note=frameshifted;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=PUW35_19015;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3906559 3907704 . + . ID=gene-PUW35_19020;Name=PUW35_19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19020 CP118132.1 Protein Homology CDS 3906559 3907704 . + 0 ID=cds-WJG92589.1;Parent=gene-PUW35_19020;Dbxref=NCBI_GP:WJG92589.1;Name=WJG92589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=PUW35_19020;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WJG92589.1;transl_table=11 CP118132.1 Genbank pseudogene 3907762 3908975 . - . ID=gene-PUW35_19025;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=pseudogene;locus_tag=PUW35_19025;pseudo=true CP118132.1 Protein Homology CDS 3907762 3908975 . - 0 ID=cds-PUW35_19025;Parent=gene-PUW35_19025;Note=frameshifted;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=PUW35_19025;product=O-antigen ligase RfaL;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3909015 3909968 . - . ID=gene-PUW35_19030;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=PUW35_19030 CP118132.1 Protein Homology CDS 3909015 3909968 . - 0 ID=cds-WJG92590.1;Parent=gene-PUW35_19030;Dbxref=NCBI_GP:WJG92590.1;Name=WJG92590.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=PUW35_19030;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WJG92590.1;transl_table=11 CP118132.1 Genbank gene 3909968 3911014 . - . ID=gene-PUW35_19035;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=PUW35_19035 CP118132.1 Protein Homology CDS 3909968 3911014 . - 0 ID=cds-WJG92591.1;Parent=gene-PUW35_19035;Dbxref=NCBI_GP:WJG92591.1;Name=WJG92591.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=PUW35_19035;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WJG92591.1;transl_table=11 CP118132.1 Genbank gene 3911017 3911949 . - . ID=gene-PUW35_19040;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=PUW35_19040 CP118132.1 Protein Homology CDS 3911017 3911949 . - 0 ID=cds-WJG92592.1;Parent=gene-PUW35_19040;Dbxref=NCBI_GP:WJG92592.1;Name=WJG92592.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=PUW35_19040;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WJG92592.1;transl_table=11 CP118132.1 Genbank pseudogene 3912152 3913347 . + . ID=gene-PUW35_19045;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=pseudogene;locus_tag=PUW35_19045;pseudo=true CP118132.1 Protein Homology CDS 3912152 3913347 . + 0 ID=cds-PUW35_19045;Parent=gene-PUW35_19045;Note=frameshifted;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=PUW35_19045;product=glycine C-acetyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 3913357 3914381 . + . ID=gene-PUW35_19050;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=pseudogene;locus_tag=PUW35_19050;pseudo=true CP118132.1 Protein Homology CDS 3913357 3914381 . + 0 ID=cds-PUW35_19050;Parent=gene-PUW35_19050;Note=frameshifted;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=PUW35_19050;product=L-threonine 3-dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3914675 3915709 . + . ID=gene-PUW35_19055;Name=PUW35_19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19055 CP118132.1 Protein Homology CDS 3914675 3915709 . + 0 ID=cds-WJG92593.1;Parent=gene-PUW35_19055;Dbxref=NCBI_GP:WJG92593.1;Name=WJG92593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=PUW35_19055;product=glycosyltransferase;protein_id=WJG92593.1;transl_table=11 CP118132.1 Genbank gene 3915696 3916658 . - . ID=gene-PUW35_19060;Name=PUW35_19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19060 CP118132.1 Protein Homology CDS 3915696 3916658 . - 0 ID=cds-WJG92594.1;Parent=gene-PUW35_19060;Dbxref=NCBI_GP:WJG92594.1;Name=WJG92594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=PUW35_19060;product=divergent polysaccharide deacetylase family protein;protein_id=WJG92594.1;transl_table=11 CP118132.1 Genbank gene 3916662 3917921 . - . ID=gene-PUW35_19065;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=PUW35_19065 CP118132.1 Protein Homology CDS 3916662 3917921 . - 0 ID=cds-WJG95152.1;Parent=gene-PUW35_19065;Dbxref=NCBI_GP:WJG95152.1;Name=WJG95152.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=PUW35_19065;product=murein hydrolase activator EnvC;protein_id=WJG95152.1;transl_table=11 CP118132.1 Genbank gene 3917955 3919499 . - . ID=gene-PUW35_19070;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=PUW35_19070 CP118132.1 Protein Homology CDS 3917955 3919499 . - 0 ID=cds-WJG92595.1;Parent=gene-PUW35_19070;Dbxref=NCBI_GP:WJG92595.1;Name=WJG92595.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=PUW35_19070;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WJG92595.1;transl_table=11 CP118132.1 Genbank gene 3919746 3920177 . + . ID=gene-PUW35_19075;Name=PUW35_19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19075 CP118132.1 Protein Homology CDS 3919746 3920177 . + 0 ID=cds-WJG92596.1;Parent=gene-PUW35_19075;Dbxref=NCBI_GP:WJG92596.1;Name=WJG92596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=PUW35_19075;product=rhodanese-like domain-containing protein;protein_id=WJG92596.1;transl_table=11 CP118132.1 Genbank gene 3920264 3920515 . + . ID=gene-PUW35_19080;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=PUW35_19080 CP118132.1 Protein Homology CDS 3920264 3920515 . + 0 ID=cds-WJG92597.1;Parent=gene-PUW35_19080;Dbxref=NCBI_GP:WJG92597.1;Name=WJG92597.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=PUW35_19080;product=glutaredoxin 3;protein_id=WJG92597.1;transl_table=11 CP118132.1 Genbank gene 3920559 3921026 . + . ID=gene-PUW35_19085;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=PUW35_19085 CP118132.1 Protein Homology CDS 3920559 3921026 . + 0 ID=cds-WJG92598.1;Parent=gene-PUW35_19085;Dbxref=NCBI_GP:WJG92598.1;Name=WJG92598.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=PUW35_19085;product=protein-export chaperone SecB;protein_id=WJG92598.1;transl_table=11 CP118132.1 Genbank gene 3921026 3922045 . + . ID=gene-PUW35_19090;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=PUW35_19090 CP118132.1 Protein Homology CDS 3921026 3922045 . + 0 ID=cds-WJG92599.1;Parent=gene-PUW35_19090;Dbxref=NCBI_GP:WJG92599.1;Name=WJG92599.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=PUW35_19090;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WJG92599.1;transl_table=11 CP118132.1 Genbank gene 3922123 3922944 . + . ID=gene-PUW35_19095;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=PUW35_19095 CP118132.1 Protein Homology CDS 3922123 3922944 . + 0 ID=cds-WJG92600.1;Parent=gene-PUW35_19095;Dbxref=NCBI_GP:WJG92600.1;Name=WJG92600.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=PUW35_19095;product=serine O-acetyltransferase;protein_id=WJG92600.1;transl_table=11 CP118132.1 Genbank gene 3923027 3924337 . - . ID=gene-PUW35_19100;Name=PUW35_19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19100 CP118132.1 Protein Homology CDS 3923027 3924337 . - 0 ID=cds-WJG92601.1;Parent=gene-PUW35_19100;Dbxref=NCBI_GP:WJG92601.1;Name=WJG92601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=PUW35_19100;product=MFS transporter;protein_id=WJG92601.1;transl_table=11 CP118132.1 Genbank gene 3924411 3925607 . - . ID=gene-PUW35_19105;Name=PUW35_19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19105 CP118132.1 Protein Homology CDS 3924411 3925607 . - 0 ID=cds-WJG92602.1;Parent=gene-PUW35_19105;Dbxref=NCBI_GP:WJG92602.1;Name=WJG92602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=PUW35_19105;product=L-talarate/galactarate dehydratase;protein_id=WJG92602.1;transl_table=11 CP118132.1 Genbank gene 3925926 3926930 . + . ID=gene-PUW35_19110;Name=PUW35_19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19110 CP118132.1 Protein Homology CDS 3925926 3926930 . + 0 ID=cds-WJG92603.1;Parent=gene-PUW35_19110;Dbxref=NCBI_GP:WJG92603.1;Name=WJG92603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=PUW35_19110;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG92603.1;transl_table=11 CP118132.1 Genbank gene 3926998 3927471 . - . ID=gene-PUW35_19115;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=PUW35_19115 CP118132.1 Protein Homology CDS 3926998 3927471 . - 0 ID=cds-WJG92604.1;Parent=gene-PUW35_19115;Dbxref=NCBI_GP:WJG92604.1;Name=WJG92604.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=PUW35_19115;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WJG92604.1;transl_table=11 CP118132.1 Genbank gene 3927537 3928727 . - . ID=gene-PUW35_19120;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=PUW35_19120 CP118132.1 Protein Homology CDS 3927537 3928727 . - 0 ID=cds-WJG92605.1;Parent=gene-PUW35_19120;Dbxref=NCBI_GP:WJG92605.1;Name=WJG92605.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=PUW35_19120;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WJG92605.1;transl_table=11 CP118132.1 Genbank gene 3928724 3929500 . - . ID=gene-PUW35_19125;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=PUW35_19125 CP118132.1 Protein Homology CDS 3928724 3929500 . - 0 ID=cds-WJG92606.1;Parent=gene-PUW35_19125;Dbxref=NCBI_GP:WJG92606.1;Name=WJG92606.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=PUW35_19125;product=transcriptional regulator LldR;protein_id=WJG92606.1;transl_table=11 CP118132.1 Genbank pseudogene 3929497 3931153 . - . ID=gene-PUW35_19130;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=pseudogene;locus_tag=PUW35_19130;pseudo=true CP118132.1 Protein Homology CDS 3929497 3931153 . - 0 ID=cds-PUW35_19130;Parent=gene-PUW35_19130;Note=frameshifted;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=PUW35_19130;product=L-lactate permease;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3931452 3935708 . - . ID=gene-PUW35_19135;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=PUW35_19135 CP118132.1 Protein Homology CDS 3931452 3935708 . - 0 ID=cds-WJG92607.1;Parent=gene-PUW35_19135;Dbxref=NCBI_GP:WJG92607.1;Name=WJG92607.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=PUW35_19135;product=trimeric autotransporter adhesin SadA;protein_id=WJG92607.1;transl_table=11 CP118132.1 Genbank gene 3935752 3936435 . - . ID=gene-PUW35_19140;Name=PUW35_19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19140 CP118132.1 Protein Homology CDS 3935752 3936435 . - 0 ID=cds-WJG92608.1;Parent=gene-PUW35_19140;Dbxref=NCBI_GP:WJG92608.1;Name=WJG92608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=PUW35_19140;product=DUF3251 domain-containing protein;protein_id=WJG92608.1;transl_table=11 CP118132.1 Genbank gene 3936923 3937285 . - . ID=gene-PUW35_19145;Name=PUW35_19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19145 CP118132.1 Protein Homology CDS 3936923 3937285 . - 0 ID=cds-WJG92609.1;Parent=gene-PUW35_19145;Dbxref=NCBI_GP:WJG92609.1;Name=WJG92609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=PUW35_19145;product=YibL family ribosome-associated protein;protein_id=WJG92609.1;transl_table=11 CP118132.1 Genbank gene 3937576 3937785 . + . ID=gene-PUW35_19150;Name=PUW35_19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19150 CP118132.1 Protein Homology CDS 3937576 3937785 . + 0 ID=cds-WJG92610.1;Parent=gene-PUW35_19150;Dbxref=NCBI_GP:WJG92610.1;Name=WJG92610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=PUW35_19150;product=hypothetical protein;protein_id=WJG92610.1;transl_table=11 CP118132.1 Genbank gene 3937782 3938384 . - . ID=gene-PUW35_19155;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=PUW35_19155 CP118132.1 Protein Homology CDS 3937782 3938384 . - 0 ID=cds-WJG92611.1;Parent=gene-PUW35_19155;Dbxref=NCBI_GP:WJG92611.1;Name=WJG92611.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=PUW35_19155;product=mannitol operon repressor MtlR;protein_id=WJG92611.1;transl_table=11 CP118132.1 Genbank gene 3938381 3939529 . - . ID=gene-PUW35_19160;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=PUW35_19160 CP118132.1 Protein Homology CDS 3938381 3939529 . - 0 ID=cds-WJG92612.1;Parent=gene-PUW35_19160;Dbxref=NCBI_GP:WJG92612.1;Name=WJG92612.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=PUW35_19160;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WJG92612.1;transl_table=11 CP118132.1 Genbank gene 3939750 3941666 . - . ID=gene-PUW35_19165;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=PUW35_19165 CP118132.1 Protein Homology CDS 3939750 3941666 . - 0 ID=cds-WJG92613.1;Parent=gene-PUW35_19165;Dbxref=NCBI_GP:WJG92613.1;Name=WJG92613.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=PUW35_19165;product=PTS mannitol transporter subunit IICBA;protein_id=WJG92613.1;transl_table=11 CP118132.1 Genbank gene 3942142 3942750 . + . ID=gene-PUW35_19170;Name=PUW35_19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19170 CP118132.1 Protein Homology CDS 3942142 3942750 . + 0 ID=cds-WJG92614.1;Parent=gene-PUW35_19170;Dbxref=NCBI_GP:WJG92614.1;Name=WJG92614.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=PUW35_19170;product=glutathione S-transferase;protein_id=WJG92614.1;transl_table=11 CP118132.1 Genbank gene 3942849 3944240 . + . ID=gene-PUW35_19175;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=PUW35_19175 CP118132.1 Protein Homology CDS 3942849 3944240 . + 0 ID=cds-WJG92615.1;Parent=gene-PUW35_19175;Dbxref=NCBI_GP:WJG92615.1;Name=WJG92615.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=PUW35_19175;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WJG92615.1;transl_table=11 CP118132.1 Genbank gene 3944237 3946087 . + . ID=gene-PUW35_19180;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=PUW35_19180 CP118132.1 Protein Homology CDS 3944237 3946087 . + 0 ID=cds-WJG92616.1;Parent=gene-PUW35_19180;Dbxref=NCBI_GP:WJG92616.1;Name=WJG92616.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525;gbkey=CDS;gene=selB;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=PUW35_19180;product=selenocysteine-specific translation elongation factor;protein_id=WJG92616.1;transl_table=11 CP118132.1 Genbank gene 3946335 3947216 . - . ID=gene-PUW35_19185;Name=PUW35_19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19185 CP118132.1 Protein Homology CDS 3946335 3947216 . - 0 ID=cds-WJG92617.1;Parent=gene-PUW35_19185;Dbxref=NCBI_GP:WJG92617.1;Name=WJG92617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=PUW35_19185;product=ROK family protein;protein_id=WJG92617.1;transl_table=11 CP118132.1 Genbank pseudogene 3947385 3948921 . + . ID=gene-PUW35_19190;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=pseudogene;locus_tag=PUW35_19190;pseudo=true CP118132.1 Protein Homology CDS 3947385 3948921 . + 0 ID=cds-PUW35_19190;Parent=gene-PUW35_19190;Note=frameshifted;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=PUW35_19190;product=aldehyde dehydrogenase AldB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3949039 3950994 . - . ID=gene-PUW35_19195;Name=PUW35_19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19195 CP118132.1 Protein Homology CDS 3949039 3950994 . - 0 ID=cds-WJG92618.1;Parent=gene-PUW35_19195;Dbxref=NCBI_GP:WJG92618.1;Name=WJG92618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=PUW35_19195;product=glycoside hydrolase family 127 protein;protein_id=WJG92618.1;transl_table=11 CP118132.1 Genbank gene 3951258 3952073 . + . ID=gene-PUW35_19200;Name=PUW35_19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19200 CP118132.1 Protein Homology CDS 3951258 3952073 . + 0 ID=cds-WJG92619.1;Parent=gene-PUW35_19200;Dbxref=NCBI_GP:WJG92619.1;Name=WJG92619.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=PUW35_19200;product=helix-turn-helix domain-containing protein;protein_id=WJG92619.1;transl_table=11 CP118132.1 Genbank gene 3952234 3952929 . - . ID=gene-PUW35_19205;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PUW35_19205 CP118132.1 Protein Homology CDS 3952234 3952929 . - 0 ID=cds-WJG92620.1;Parent=gene-PUW35_19205;Dbxref=NCBI_GP:WJG92620.1;Name=WJG92620.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=PUW35_19205;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJG92620.1;transl_table=11 CP118132.1 Genbank gene 3952923 3953783 . - . ID=gene-PUW35_19210;Name=PUW35_19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19210 CP118132.1 Protein Homology CDS 3952923 3953783 . - 0 ID=cds-WJG92621.1;Parent=gene-PUW35_19210;Dbxref=NCBI_GP:WJG92621.1;Name=WJG92621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=PUW35_19210;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WJG92621.1;transl_table=11 CP118132.1 Genbank gene 3953776 3954438 . - . ID=gene-PUW35_19215;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PUW35_19215 CP118132.1 Protein Homology CDS 3953776 3954438 . - 0 ID=cds-WJG92622.1;Parent=gene-PUW35_19215;Dbxref=NCBI_GP:WJG92622.1;Name=WJG92622.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=PUW35_19215;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WJG92622.1;transl_table=11 CP118132.1 Genbank pseudogene 3954435 3955930 . - . ID=gene-PUW35_19220;Name=PUW35_19220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19220;pseudo=true CP118132.1 Protein Homology CDS 3954435 3955930 . - 0 ID=cds-PUW35_19220;Parent=gene-PUW35_19220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=PUW35_19220;product=carbohydrate kinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3955934 3956920 . - . ID=gene-PUW35_19225;Name=PUW35_19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19225 CP118132.1 Protein Homology CDS 3955934 3956920 . - 0 ID=cds-WJG92623.1;Parent=gene-PUW35_19225;Dbxref=NCBI_GP:WJG92623.1;Name=WJG92623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=PUW35_19225;product=TRAP transporter substrate-binding protein;protein_id=WJG92623.1;transl_table=11 CP118132.1 Genbank gene 3956932 3958209 . - . ID=gene-PUW35_19230;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=PUW35_19230 CP118132.1 Protein Homology CDS 3956932 3958209 . - 0 ID=cds-WJG92624.1;Parent=gene-PUW35_19230;Dbxref=NCBI_GP:WJG92624.1;Name=WJG92624.1;gbkey=CDS;gene=yiaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=PUW35_19230;product=2%2C3-diketo-L-gulonate transporter large permease YiaN;protein_id=WJG92624.1;transl_table=11 CP118132.1 Genbank gene 3958212 3958685 . - . ID=gene-PUW35_19235;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=PUW35_19235 CP118132.1 Protein Homology CDS 3958212 3958685 . - 0 ID=cds-WJG92625.1;Parent=gene-PUW35_19235;Dbxref=NCBI_GP:WJG92625.1;Name=WJG92625.1;gbkey=CDS;gene=yiaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=PUW35_19235;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WJG92625.1;transl_table=11 CP118132.1 Genbank gene 3958824 3959756 . - . ID=gene-PUW35_19240;Name=PUW35_19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19240 CP118132.1 Protein Homology CDS 3958824 3959756 . - 0 ID=cds-WJG92626.1;Parent=gene-PUW35_19240;Dbxref=NCBI_GP:WJG92626.1;Name=WJG92626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=PUW35_19240;product=DUF4862 family protein;protein_id=WJG92626.1;transl_table=11 CP118132.1 Genbank gene 3959780 3960244 . - . ID=gene-PUW35_19245;Name=PUW35_19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19245 CP118132.1 Protein Homology CDS 3959780 3960244 . - 0 ID=cds-WJG92627.1;Parent=gene-PUW35_19245;Dbxref=NCBI_GP:WJG92627.1;Name=WJG92627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=PUW35_19245;product=YhcH/YjgK/YiaL family protein;protein_id=WJG92627.1;transl_table=11 CP118132.1 Genbank gene 3960256 3961248 . - . ID=gene-PUW35_19250;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=PUW35_19250 CP118132.1 Protein Homology CDS 3960256 3961248 . - 0 ID=cds-WJG92628.1;Parent=gene-PUW35_19250;Dbxref=NCBI_GP:WJG92628.1;Name=WJG92628.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=PUW35_19250;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WJG92628.1;transl_table=11 CP118132.1 Genbank gene 3961478 3962278 . + . ID=gene-PUW35_19255;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=PUW35_19255 CP118132.1 Protein Homology CDS 3961478 3962278 . + 0 ID=cds-WJG92629.1;Parent=gene-PUW35_19255;Dbxref=NCBI_GP:WJG92629.1;Name=WJG92629.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=PUW35_19255;product=IclR family transcriptional regulator YiaJ;protein_id=WJG92629.1;transl_table=11 CP118132.1 Genbank gene 3962395 3962868 . + . ID=gene-PUW35_19260;Name=PUW35_19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19260 CP118132.1 Protein Homology CDS 3962395 3962868 . + 0 ID=cds-WJG92630.1;Parent=gene-PUW35_19260;Dbxref=NCBI_GP:WJG92630.1;Name=WJG92630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=PUW35_19260;product=4Fe-4S dicluster domain-containing protein;protein_id=WJG92630.1;transl_table=11 CP118132.1 Genbank gene 3962905 3964155 . - . ID=gene-PUW35_19265;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=PUW35_19265 CP118132.1 Protein Homology CDS 3962905 3964155 . - 0 ID=cds-WJG92631.1;Parent=gene-PUW35_19265;Dbxref=NCBI_GP:WJG92631.1;Name=WJG92631.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=PUW35_19265;product=valine--pyruvate transaminase;protein_id=WJG92631.1;transl_table=11 CP118132.1 Genbank pseudogene 3964329 3966340 . - . ID=gene-PUW35_19270;Name=PUW35_19270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19270;pseudo=true CP118132.1 Protein Homology CDS 3964329 3966340 . - 0 ID=cds-PUW35_19270;Parent=gene-PUW35_19270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=PUW35_19270;product=alpha-amylase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3966656 3967480 . + . ID=gene-PUW35_19275;Name=PUW35_19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19275 CP118132.1 Protein Homology CDS 3966656 3967480 . + 0 ID=cds-WJG92632.1;Parent=gene-PUW35_19275;Dbxref=NCBI_GP:WJG92632.1;Name=WJG92632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=PUW35_19275;product=protein bax;protein_id=WJG92632.1;transl_table=11 CP118132.1 Genbank gene 3967541 3968719 . - . ID=gene-PUW35_19280;Name=PUW35_19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19280 CP118132.1 Protein Homology CDS 3967541 3968719 . - 0 ID=cds-WJG92633.1;Parent=gene-PUW35_19280;Dbxref=NCBI_GP:WJG92633.1;Name=WJG92633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=PUW35_19280;product=XylR family transcriptional regulator;protein_id=WJG92633.1;transl_table=11 CP118132.1 Genbank gene 3969082 3970404 . + . ID=gene-PUW35_19285;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=PUW35_19285 CP118132.1 Protein Homology CDS 3969082 3970404 . + 0 ID=cds-WJG92634.1;Parent=gene-PUW35_19285;Dbxref=NCBI_GP:WJG92634.1;Name=WJG92634.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=PUW35_19285;product=xylose isomerase;protein_id=WJG92634.1;transl_table=11 CP118132.1 Genbank gene 3970504 3971958 . + . ID=gene-PUW35_19290;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=PUW35_19290 CP118132.1 Protein Homology CDS 3970504 3971958 . + 0 ID=cds-WJG95153.1;Parent=gene-PUW35_19290;Dbxref=NCBI_GP:WJG95153.1;Name=WJG95153.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=PUW35_19290;product=xylulokinase;protein_id=WJG95153.1;transl_table=11 CP118132.1 Genbank gene 3972133 3972486 . + . ID=gene-PUW35_19295;Name=PUW35_19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19295 CP118132.1 Protein Homology CDS 3972133 3972486 . + 0 ID=cds-WJG92635.1;Parent=gene-PUW35_19295;Dbxref=NCBI_GP:WJG92635.1;Name=WJG92635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=PUW35_19295;product=YiaA/YiaB family protein;protein_id=WJG92635.1;transl_table=11 CP118132.1 Genbank pseudogene 3972509 3973504 . - . ID=gene-PUW35_19300;Name=PUW35_19300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19300;pseudo=true CP118132.1 Protein Homology CDS 3972509 3973504 . - 0 ID=cds-PUW35_19300;Parent=gene-PUW35_19300;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=PUW35_19300;product=acyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3973670 3973972 . + . ID=gene-PUW35_19305;Name=PUW35_19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19305 CP118132.1 Protein Homology CDS 3973670 3973972 . + 0 ID=cds-WJG92636.1;Parent=gene-PUW35_19305;Dbxref=NCBI_GP:WJG92636.1;Name=WJG92636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=PUW35_19305;product=YsaB family lipoprotein;protein_id=WJG92636.1;transl_table=11 CP118132.1 Genbank gene 3974111 3975022 . + . ID=gene-PUW35_19310;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=PUW35_19310 CP118132.1 Protein Homology CDS 3974111 3975022 . + 0 ID=cds-WJG92637.1;Parent=gene-PUW35_19310;Dbxref=NCBI_GP:WJG92637.1;Name=WJG92637.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=PUW35_19310;product=glycine--tRNA ligase subunit alpha;protein_id=WJG92637.1;transl_table=11 CP118132.1 Genbank gene 3975032 3977101 . + . ID=gene-PUW35_19315;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=PUW35_19315 CP118132.1 Protein Homology CDS 3975032 3977101 . + 0 ID=cds-WJG92638.1;Parent=gene-PUW35_19315;Dbxref=NCBI_GP:WJG92638.1;Name=WJG92638.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=PUW35_19315;product=glycine--tRNA ligase subunit beta;protein_id=WJG92638.1;transl_table=11 CP118132.1 Genbank pseudogene 3977491 3977889 . + . ID=gene-PUW35_19320;Name=PUW35_19320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19320;pseudo=true CP118132.1 Protein Homology CDS 3977491 3977889 . + 0 ID=cds-PUW35_19320;Parent=gene-PUW35_19320;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=PUW35_19320;product=IS3 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3978061 3978528 . + . ID=gene-PUW35_19325;Name=PUW35_19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19325 CP118132.1 Protein Homology CDS 3978061 3978528 . + 0 ID=cds-WJG92639.1;Parent=gene-PUW35_19325;Dbxref=NCBI_GP:WJG92639.1;Name=WJG92639.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462554.1;locus_tag=PUW35_19325;product=GNAT family N-acetyltransferase;protein_id=WJG92639.1;transl_table=11 CP118132.1 Genbank gene 3978706 3978993 . + . ID=gene-PUW35_19330;Name=PUW35_19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19330 CP118132.1 Protein Homology CDS 3978706 3978993 . + 0 ID=cds-WJG92640.1;Parent=gene-PUW35_19330;Dbxref=NCBI_GP:WJG92640.1;Name=WJG92640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=PUW35_19330;product=DUF1778 domain-containing protein;protein_id=WJG92640.1;transl_table=11 CP118132.1 Genbank gene 3979008 3979466 . + . ID=gene-PUW35_19335;Name=PUW35_19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19335 CP118132.1 Protein Homology CDS 3979008 3979466 . + 0 ID=cds-WJG92641.1;Parent=gene-PUW35_19335;Dbxref=NCBI_GP:WJG92641.1;Name=WJG92641.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810665.1;locus_tag=PUW35_19335;product=GNAT family N-acetyltransferase;protein_id=WJG92641.1;transl_table=11 CP118132.1 Genbank gene 3979837 3980376 . - . ID=gene-PUW35_19340;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=PUW35_19340 CP118132.1 Protein Homology CDS 3979837 3980376 . - 0 ID=cds-WJG92642.1;Parent=gene-PUW35_19340;Dbxref=NCBI_GP:WJG92642.1;Name=WJG92642.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=PUW35_19340;product=copper-binding periplasmic metallochaperone CueP;protein_id=WJG92642.1;transl_table=11 CP118132.1 Genbank gene 3980550 3980762 . - . ID=gene-PUW35_19345;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=PUW35_19345 CP118132.1 Protein Homology CDS 3980550 3980762 . - 0 ID=cds-WJG92643.1;Parent=gene-PUW35_19345;Dbxref=NCBI_GP:WJG92643.1;Name=WJG92643.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=PUW35_19345;product=RNA chaperone/antiterminator CspA;protein_id=WJG92643.1;transl_table=11 CP118132.1 Genbank gene 3981049 3981339 . - . ID=gene-PUW35_19350;Name=PUW35_19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19350 CP118132.1 Protein Homology CDS 3981049 3981339 . - 0 ID=cds-WJG92644.1;Parent=gene-PUW35_19350;Dbxref=NCBI_GP:WJG92644.1;Name=WJG92644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=PUW35_19350;product=HTH-type transcriptional regulator;protein_id=WJG92644.1;transl_table=11 CP118132.1 Genbank gene 3981778 3982488 . + . ID=gene-PUW35_19355;Name=PUW35_19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19355 CP118132.1 Protein Homology CDS 3981778 3982488 . + 0 ID=cds-WJG92645.1;Parent=gene-PUW35_19355;Dbxref=NCBI_GP:WJG92645.1;Name=WJG92645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=PUW35_19355;product=DUF3053 domain-containing protein;protein_id=WJG92645.1;transl_table=11 CP118132.1 Genbank gene 3982538 3983512 . - . ID=gene-PUW35_19360;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=PUW35_19360 CP118132.1 Protein Homology CDS 3982538 3983512 . - 0 ID=cds-WJG92646.1;Parent=gene-PUW35_19360;Dbxref=NCBI_GP:WJG92646.1;Name=WJG92646.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=PUW35_19360;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WJG92646.1;transl_table=11 CP118132.1 Genbank gene 3983731 3984393 . - . ID=gene-PUW35_19365;Name=PUW35_19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19365 CP118132.1 Protein Homology CDS 3983731 3984393 . - 0 ID=cds-WJG92647.1;Parent=gene-PUW35_19365;Dbxref=NCBI_GP:WJG92647.1;Name=WJG92647.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=PUW35_19365;product=OmpA family lipoprotein;protein_id=WJG92647.1;transl_table=11 CP118132.1 Genbank gene 3984546 3986879 . + . ID=gene-PUW35_19370;Name=PUW35_19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19370 CP118132.1 Protein Homology CDS 3984546 3986879 . + 0 ID=cds-WJG92648.1;Parent=gene-PUW35_19370;Dbxref=NCBI_GP:WJG92648.1;Name=WJG92648.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=PUW35_19370;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WJG92648.1;transl_table=11 CP118132.1 Genbank gene 3986848 3987288 . - . ID=gene-PUW35_19375;Name=PUW35_19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19375 CP118132.1 Protein Homology CDS 3986848 3987288 . - 0 ID=cds-WJG92649.1;Parent=gene-PUW35_19375;Dbxref=NCBI_GP:WJG92649.1;Name=WJG92649.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=PUW35_19375;product=N-acetyltransferase;protein_id=WJG92649.1;transl_table=11 CP118132.1 Genbank gene 3987266 3987847 . - . ID=gene-PUW35_19380;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=PUW35_19380 CP118132.1 Protein Homology CDS 3987266 3987847 . - 0 ID=cds-WJG92650.1;Parent=gene-PUW35_19380;Dbxref=NCBI_GP:WJG92650.1;Name=WJG92650.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=PUW35_19380;product=DNA-3-methyladenine glycosylase I;protein_id=WJG92650.1;transl_table=11 CP118132.1 Genbank gene 3988004 3988708 . + . ID=gene-PUW35_19385;Name=PUW35_19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19385 CP118132.1 Protein Homology CDS 3988004 3988708 . + 0 ID=cds-WJG92651.1;Parent=gene-PUW35_19385;Dbxref=NCBI_GP:WJG92651.1;Name=WJG92651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=PUW35_19385;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WJG92651.1;transl_table=11 CP118132.1 Genbank pseudogene 3988730 3988864 . + . ID=gene-PUW35_19390;Name=PUW35_19390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19390;pseudo=true CP118132.1 Protein Homology CDS 3988730 3988864 . + 0 ID=cds-PUW35_19390;Parent=gene-PUW35_19390;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585546.1;locus_tag=PUW35_19390;product=oxalate/formate antiport family MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3989223 3989747 . + . ID=gene-PUW35_19395;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=PUW35_19395 CP118132.1 Protein Homology CDS 3989223 3989747 . + 0 ID=cds-WJG92652.1;Parent=gene-PUW35_19395;Dbxref=NCBI_GP:WJG92652.1;Name=WJG92652.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=PUW35_19395;product=long polar fimbria major subunit LpfA;protein_id=WJG92652.1;transl_table=11 CP118132.1 Genbank gene 3989832 3990530 . + . ID=gene-PUW35_19400;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=PUW35_19400 CP118132.1 Protein Homology CDS 3989832 3990530 . + 0 ID=cds-WJG92653.1;Parent=gene-PUW35_19400;Dbxref=NCBI_GP:WJG92653.1;Name=WJG92653.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=PUW35_19400;product=long polar fimbrial biogenesis chaperone LpfB;protein_id=WJG92653.1;transl_table=11 CP118132.1 Genbank pseudogene 3990553 3993080 . + . ID=gene-PUW35_19405;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=pseudogene;locus_tag=PUW35_19405;pseudo=true CP118132.1 Protein Homology CDS 3990553 3993080 . + 0 ID=cds-PUW35_19405;Parent=gene-PUW35_19405;Note=frameshifted;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=PUW35_19405;product=outer membrane usher protein LpfC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3993098 3994177 . + . ID=gene-PUW35_19410;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=PUW35_19410 CP118132.1 Protein Homology CDS 3993098 3994177 . + 0 ID=cds-WJG92654.1;Parent=gene-PUW35_19410;Dbxref=NCBI_GP:WJG92654.1;Name=WJG92654.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=PUW35_19410;product=long polar fimbrial protein LpfD;protein_id=WJG92654.1;transl_table=11 CP118132.1 Genbank gene 3994183 3994710 . + . ID=gene-PUW35_19415;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=PUW35_19415 CP118132.1 Protein Homology CDS 3994183 3994710 . + 0 ID=cds-WJG92655.1;Parent=gene-PUW35_19415;Dbxref=NCBI_GP:WJG92655.1;Name=WJG92655.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=PUW35_19415;product=long polar fimbrial protein LpfE;protein_id=WJG92655.1;transl_table=11 CP118132.1 Genbank gene 3994928 3996619 . + . ID=gene-PUW35_19420;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=PUW35_19420 CP118132.1 Protein Homology CDS 3994928 3996619 . + 0 ID=cds-WJG92656.1;Parent=gene-PUW35_19420;Dbxref=NCBI_GP:WJG92656.1;Name=WJG92656.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=PUW35_19420;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WJG92656.1;transl_table=11 CP118132.1 Genbank gene 3996710 3996786 . + . ID=gene-PUW35_19425;Name=PUW35_19425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_19425 CP118132.1 tRNAscan-SE tRNA 3996710 3996786 . + . ID=rna-PUW35_19425;Parent=gene-PUW35_19425;anticodon=(pos:3996744..3996746);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_19425;product=tRNA-Pro CP118132.1 tRNAscan-SE exon 3996710 3996786 . + . ID=exon-PUW35_19425-1;Parent=rna-PUW35_19425;anticodon=(pos:3996744..3996746);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_19425;product=tRNA-Pro CP118132.1 Genbank gene 3996823 3996941 . + . ID=gene-PUW35_19430;Name=PUW35_19430;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW35_19430 CP118132.1 cmsearch ncRNA 3996823 3996941 . + . ID=rna-PUW35_19430;Parent=gene-PUW35_19430;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_19430;product=RtT sRNA CP118132.1 cmsearch exon 3996823 3996941 . + . ID=exon-PUW35_19430-1;Parent=rna-PUW35_19430;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_19430;product=RtT sRNA CP118132.1 Genbank pseudogene 3996932 3997931 . - . ID=gene-PUW35_19435;Name=PUW35_19435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19435;pseudo=true CP118132.1 Protein Homology CDS 3996932 3997931 . - 0 ID=cds-PUW35_19435;Parent=gene-PUW35_19435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=PUW35_19435;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 3998080 3999204 . + . ID=gene-PUW35_19440;Name=PUW35_19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19440 CP118132.1 Protein Homology CDS 3998080 3999204 . + 0 ID=cds-WJG92657.1;Parent=gene-PUW35_19440;Dbxref=NCBI_GP:WJG92657.1;Name=WJG92657.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=PUW35_19440;product=aryl-sulfate sulfotransferase;protein_id=WJG92657.1;transl_table=11 CP118132.1 Genbank gene 3999262 4000587 . + . ID=gene-PUW35_19445;Name=PUW35_19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19445 CP118132.1 Protein Homology CDS 3999262 4000587 . + 0 ID=cds-WJG92658.1;Parent=gene-PUW35_19445;Dbxref=NCBI_GP:WJG92658.1;Name=WJG92658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=PUW35_19445;product=uracil-xanthine permease family protein;protein_id=WJG92658.1;transl_table=11 CP118132.1 Genbank pseudogene 4001143 4002750 . + . ID=gene-PUW35_19450;Name=PUW35_19450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19450;pseudo=true CP118132.1 Protein Homology CDS 4001143 4002750 . + 0 ID=cds-PUW35_19450;Parent=gene-PUW35_19450;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=PUW35_19450;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4002907 4003923 . + . ID=gene-PUW35_19455;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=pseudogene;locus_tag=PUW35_19455;pseudo=true CP118132.1 Protein Homology CDS 4002907 4003923 . + 0 ID=cds-PUW35_19455;Parent=gene-PUW35_19455;Note=frameshifted;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=PUW35_19455;product=dipeptide ABC transporter permease DppB;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4003933 4004834 . + . ID=gene-PUW35_19460;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=pseudogene;locus_tag=PUW35_19460;pseudo=true CP118132.1 Protein Homology CDS 4003933 4004834 . + 0 ID=cds-PUW35_19460;Parent=gene-PUW35_19460;Note=frameshifted;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=PUW35_19460;product=dipeptide ABC transporter permease DppC;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4004845 4005828 . + . ID=gene-PUW35_19465;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=PUW35_19465 CP118132.1 Protein Homology CDS 4004845 4005828 . + 0 ID=cds-WJG92659.1;Parent=gene-PUW35_19465;Dbxref=NCBI_GP:WJG92659.1;Name=WJG92659.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=PUW35_19465;product=dipeptide ABC transporter ATP-binding protein;protein_id=WJG92659.1;transl_table=11 CP118132.1 Genbank gene 4005825 4006838 . + . ID=gene-PUW35_19470;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=PUW35_19470 CP118132.1 Protein Homology CDS 4005825 4006838 . + 0 ID=cds-WJG92660.1;Parent=gene-PUW35_19470;Dbxref=NCBI_GP:WJG92660.1;Name=WJG92660.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=PUW35_19470;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WJG92660.1;transl_table=11 CP118132.1 Genbank pseudogene 4006939 4008237 . - . ID=gene-PUW35_19475;Name=PUW35_19475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19475;pseudo=true CP118132.1 Protein Homology CDS 4006939 4008237 . - 0 ID=cds-PUW35_19475;Parent=gene-PUW35_19475;Note=internal stop;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=PUW35_19475;product=aromatic amino acid transport family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4008355 4008504 . - . ID=gene-PUW35_19480;Name=PUW35_19480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19480;pseudo=true CP118132.1 Protein Homology CDS 4008355 4008504 . - 0 ID=cds-PUW35_19480;Parent=gene-PUW35_19480;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.2;locus_tag=PUW35_19480;product=PLP-dependent transferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4008880 4008987 . + . ID=gene-PUW35_19485;Name=PUW35_19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19485 CP118132.1 Protein Homology CDS 4008880 4008987 . + 0 ID=cds-WJG92661.1;Parent=gene-PUW35_19485;Dbxref=NCBI_GP:WJG92661.1;Name=WJG92661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141634.1;locus_tag=PUW35_19485;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WJG92661.1;transl_table=11 CP118132.1 Genbank pseudogene 4009069 4010748 . - . ID=gene-PUW35_19490;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=pseudogene;locus_tag=PUW35_19490;pseudo=true CP118132.1 Protein Homology CDS 4009069 4010748 . - 0 ID=cds-PUW35_19490;Parent=gene-PUW35_19490;Note=internal stop;Ontology_term=GO:0030244,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsG;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=PUW35_19490;product=cellulose biosynthesis protein BcsG;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4010745 4010936 . - . ID=gene-PUW35_19495;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=PUW35_19495 CP118132.1 Protein Homology CDS 4010745 4010936 . - 0 ID=cds-WJG92662.1;Parent=gene-PUW35_19495;Dbxref=NCBI_GP:WJG92662.1;Name=WJG92662.1;Ontology_term=GO:0052324,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsF;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=PUW35_19495;product=cellulose biosynthesis protein BcsF;protein_id=WJG92662.1;transl_table=11 CP118132.1 Genbank gene 4010933 4012504 . - . ID=gene-PUW35_19500;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=PUW35_19500 CP118132.1 Protein Homology CDS 4010933 4012504 . - 0 ID=cds-WJG92663.1;Parent=gene-PUW35_19500;Dbxref=NCBI_GP:WJG92663.1;Name=WJG92663.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=PUW35_19500;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WJG92663.1;transl_table=11 CP118132.1 Genbank gene 4012749 4012952 . + . ID=gene-PUW35_19505;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=PUW35_19505 CP118132.1 Protein Homology CDS 4012749 4012952 . + 0 ID=cds-WJG92664.1;Parent=gene-PUW35_19505;Dbxref=NCBI_GP:WJG92664.1;Name=WJG92664.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=PUW35_19505;product=cellulose biosynthesis protein BcsR;protein_id=WJG92664.1;transl_table=11 CP118132.1 Genbank pseudogene 4012953 4013705 . + . ID=gene-PUW35_19510;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=pseudogene;locus_tag=PUW35_19510;pseudo=true CP118132.1 Protein Homology CDS 4012953 4013705 . + 0 ID=cds-PUW35_19510;Parent=gene-PUW35_19510;Note=internal stop;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=PUW35_19510;product=cellulose biosynthesis protein BcsQ;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4013702 4016326 . + . ID=gene-PUW35_19515;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=PUW35_19515 CP118132.1 Protein Homology CDS 4013702 4016326 . + 0 ID=cds-WJG92665.1;Parent=gene-PUW35_19515;Dbxref=NCBI_GP:WJG92665.1;Name=WJG92665.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=PUW35_19515;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WJG92665.1;transl_table=11 CP118132.1 Genbank gene 4016337 4018637 . + . ID=gene-PUW35_19520;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=PUW35_19520 CP118132.1 Protein Homology CDS 4016337 4018637 . + 0 ID=cds-WJG92666.1;Parent=gene-PUW35_19520;Dbxref=NCBI_GP:WJG92666.1;Name=WJG92666.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=PUW35_19520;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WJG92666.1;transl_table=11 CP118132.1 Genbank gene 4018641 4019750 . + . ID=gene-PUW35_19525;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=PUW35_19525 CP118132.1 Protein Homology CDS 4018641 4019750 . + 0 ID=cds-WJG92667.1;Parent=gene-PUW35_19525;Dbxref=NCBI_GP:WJG92667.1;Name=WJG92667.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=PUW35_19525;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WJG92667.1;transl_table=11 CP118132.1 Genbank gene 4019732 4023217 . + . ID=gene-PUW35_19530;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=PUW35_19530 CP118132.1 Protein Homology CDS 4019732 4023217 . + 0 ID=cds-WJG92668.1;Parent=gene-PUW35_19530;Dbxref=NCBI_GP:WJG92668.1;Name=WJG92668.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=PUW35_19530;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WJG92668.1;transl_table=11 CP118132.1 Genbank gene 4023391 4025397 . + . ID=gene-PUW35_19535;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=PUW35_19535 CP118132.1 Protein Homology CDS 4023391 4025397 . + 0 ID=cds-WJG92669.1;Parent=gene-PUW35_19535;Dbxref=NCBI_GP:WJG92669.1;Name=WJG92669.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=PUW35_19535;product=biofilm formation regulator HmsP;protein_id=WJG92669.1;transl_table=11 CP118132.1 Genbank gene 4025555 4026841 . + . ID=gene-PUW35_19540;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=PUW35_19540 CP118132.1 Protein Homology CDS 4025555 4026841 . + 0 ID=cds-WJG92670.1;Parent=gene-PUW35_19540;Dbxref=NCBI_GP:WJG92670.1;Name=WJG92670.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858227.1;locus_tag=PUW35_19540;product=C4-dicarboxylate transporter DctC;protein_id=WJG92670.1;transl_table=11 CP118132.1 Genbank gene 4027061 4028548 . + . ID=gene-PUW35_19545;Name=PUW35_19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19545 CP118132.1 Protein Homology CDS 4027061 4028548 . + 0 ID=cds-WJG92671.1;Parent=gene-PUW35_19545;Dbxref=NCBI_GP:WJG92671.1;Name=WJG92671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=PUW35_19545;product=pitrilysin family protein;protein_id=WJG92671.1;transl_table=11 CP118132.1 Genbank gene 4028602 4029531 . - . ID=gene-PUW35_19550;Name=PUW35_19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19550 CP118132.1 Protein Homology CDS 4028602 4029531 . - 0 ID=cds-WJG92672.1;Parent=gene-PUW35_19550;Dbxref=NCBI_GP:WJG92672.1;Name=WJG92672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=PUW35_19550;product=sugar kinase;protein_id=WJG92672.1;transl_table=11 CP118132.1 Genbank pseudogene 4029760 4030526 . + . ID=gene-PUW35_19555;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=pseudogene;locus_tag=PUW35_19555;pseudo=true CP118132.1 Protein Homology CDS 4029760 4030526 . + 0 ID=cds-PUW35_19555;Parent=gene-PUW35_19555;Note=frameshifted;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=PUW35_19555;product=cyclic-guanylate-specific phosphodiesterase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4030636 4032695 . + . ID=gene-PUW35_19560;Name=PUW35_19560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19560;pseudo=true CP118132.1 Protein Homology CDS 4030636 4032695 . + 0 ID=cds-PUW35_19560;Parent=gene-PUW35_19560;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=PUW35_19560;product=AsmA family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4032735 4034056 . - . ID=gene-PUW35_19565;Name=PUW35_19565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19565;pseudo=true CP118132.1 Protein Homology CDS 4032735 4034056 . - 0 ID=cds-PUW35_19565;Parent=gene-PUW35_19565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=PUW35_19565;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4034407 4035435 . - . ID=gene-PUW35_19570;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=PUW35_19570 CP118132.1 Protein Homology CDS 4034407 4035435 . - 0 ID=cds-WJG92673.1;Parent=gene-PUW35_19570;Dbxref=NCBI_GP:WJG92673.1;Name=WJG92673.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=PUW35_19570;product=inner membrane protein YhjD;protein_id=WJG92673.1;transl_table=11 CP118132.1 Genbank pseudogene 4035508 4036406 . - . ID=gene-PUW35_19575;Name=PUW35_19575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19575;pseudo=true CP118132.1 Protein Homology CDS 4035508 4036406 . - 0 ID=cds-PUW35_19575;Parent=gene-PUW35_19575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=PUW35_19575;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4037037 4037635 . + . ID=gene-PUW35_19580;Name=PUW35_19580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19580;pseudo=true CP118132.1 Protein Homology CDS 4037037 4037635 . + 0 ID=cds-PUW35_19580;Parent=gene-PUW35_19580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=PUW35_19580;product=response regulator transcription factor;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4037641 4037997 . - . ID=gene-PUW35_19585;Name=PUW35_19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19585 CP118132.1 Protein Homology CDS 4037641 4037997 . - 0 ID=cds-WJG92674.1;Parent=gene-PUW35_19585;Dbxref=NCBI_GP:WJG92674.1;Name=WJG92674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=PUW35_19585;product=lysozyme;protein_id=WJG92674.1;transl_table=11 CP118132.1 Genbank gene 4038278 4039867 . + . ID=gene-PUW35_19590;Name=PUW35_19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19590 CP118132.1 Protein Homology CDS 4038278 4039867 . + 0 ID=cds-WJG92675.1;Parent=gene-PUW35_19590;Dbxref=NCBI_GP:WJG92675.1;Name=WJG92675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=PUW35_19590;product=STY4199 family HEPN domain-containing protein;protein_id=WJG92675.1;transl_table=11 CP118132.1 Genbank gene 4039880 4041529 . - . ID=gene-PUW35_19595;Name=PUW35_19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19595 CP118132.1 Protein Homology CDS 4039880 4041529 . - 0 ID=cds-WJG92676.1;Parent=gene-PUW35_19595;Dbxref=NCBI_GP:WJG92676.1;Name=WJG92676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=PUW35_19595;product=alpha%2Calpha-trehalase;protein_id=WJG92676.1;transl_table=11 CP118132.1 Genbank gene 4041855 4042574 . + . ID=gene-PUW35_19600;Name=PUW35_19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19600 CP118132.1 Protein Homology CDS 4041855 4042574 . + 0 ID=cds-WJG92677.1;Parent=gene-PUW35_19600;Dbxref=NCBI_GP:WJG92677.1;Name=WJG92677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=PUW35_19600;product=GntR family transcriptional regulator;protein_id=WJG92677.1;transl_table=11 CP118132.1 Genbank pseudogene 4042750 4043726 . + . ID=gene-PUW35_19605;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=pseudogene;locus_tag=PUW35_19605;pseudo=true CP118132.1 Protein Homology CDS 4042750 4043726 . + 0 ID=cds-PUW35_19605;Parent=gene-PUW35_19605;Note=frameshifted;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=PUW35_19605;product=6-phosphofructose-aspartate deglycase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4043790 4044635 . + . ID=gene-PUW35_19610;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=PUW35_19610 CP118132.1 Protein Homology CDS 4043790 4044635 . + 0 ID=cds-WJG95154.1;Parent=gene-PUW35_19610;Dbxref=NCBI_GP:WJG95154.1;Name=WJG95154.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=PUW35_19610;product=fructose-aspartate kinase;protein_id=WJG95154.1;transl_table=11 CP118132.1 Genbank gene 4044689 4046008 . + . ID=gene-PUW35_19615;Name=PUW35_19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19615 CP118132.1 Protein Homology CDS 4044689 4046008 . + 0 ID=cds-WJG92678.1;Parent=gene-PUW35_19615;Dbxref=NCBI_GP:WJG92678.1;Name=WJG92678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=PUW35_19615;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WJG92678.1;transl_table=11 CP118132.1 Genbank gene 4046067 4047110 . + . ID=gene-PUW35_19620;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=PUW35_19620 CP118132.1 Protein Homology CDS 4046067 4047110 . + 0 ID=cds-WJG92679.1;Parent=gene-PUW35_19620;Dbxref=NCBI_GP:WJG92679.1;Name=WJG92679.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=PUW35_19620;product=fructose-asparagine asparaginase;protein_id=WJG92679.1;transl_table=11 CP118132.1 Genbank gene 4047157 4048509 . - . ID=gene-PUW35_19625;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=PUW35_19625 CP118132.1 Protein Homology CDS 4047157 4048509 . - 0 ID=cds-WJG92680.1;Parent=gene-PUW35_19625;Dbxref=NCBI_GP:WJG92680.1;Name=WJG92680.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=PUW35_19625;product=glutathione-disulfide reductase;protein_id=WJG92680.1;transl_table=11 CP118132.1 Genbank gene 4048614 4049456 . - . ID=gene-PUW35_19630;Name=PUW35_19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19630 CP118132.1 Protein Homology CDS 4048614 4049456 . - 0 ID=cds-WJG92681.1;Parent=gene-PUW35_19630;Dbxref=NCBI_GP:WJG92681.1;Name=WJG92681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=PUW35_19630;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WJG92681.1;transl_table=11 CP118132.1 Genbank gene 4049667 4050938 . + . ID=gene-PUW35_19635;Name=PUW35_19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19635 CP118132.1 Protein Homology CDS 4049667 4050938 . + 0 ID=cds-WJG92682.1;Parent=gene-PUW35_19635;Dbxref=NCBI_GP:WJG92682.1;Name=WJG92682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=PUW35_19635;product=phosphatase PAP2 family protein;protein_id=WJG92682.1;transl_table=11 CP118132.1 Genbank pseudogene 4051120 4053161 . + . ID=gene-PUW35_19640;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=pseudogene;locus_tag=PUW35_19640;pseudo=true CP118132.1 Protein Homology CDS 4051120 4053161 . + 0 ID=cds-PUW35_19640;Parent=gene-PUW35_19640;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013591.2;locus_tag=PUW35_19640;product=oligopeptidase A;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4053168 4053926 . + . ID=gene-PUW35_19645;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=PUW35_19645 CP118132.1 Protein Homology CDS 4053168 4053926 . + 0 ID=cds-WJG92683.1;Parent=gene-PUW35_19645;Dbxref=NCBI_GP:WJG92683.1;Name=WJG92683.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=PUW35_19645;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WJG92683.1;transl_table=11 CP118132.1 Genbank gene 4054018 4055490 . - . ID=gene-PUW35_19650;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=PUW35_19650 CP118132.1 Protein Homology CDS 4054018 4055490 . - 0 ID=cds-WJG92684.1;Parent=gene-PUW35_19650;Dbxref=NCBI_GP:WJG92684.1;Name=WJG92684.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=PUW35_19650;product=dipeptide/tripeptide permease DtpB;protein_id=WJG92684.1;transl_table=11 CP118132.1 Genbank gene 4055815 4056249 . - . ID=gene-PUW35_19655;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=PUW35_19655 CP118132.1 Protein Homology CDS 4055815 4056249 . - 0 ID=cds-WJG92685.1;Parent=gene-PUW35_19655;Dbxref=NCBI_GP:WJG92685.1;Name=WJG92685.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=PUW35_19655;product=universal stress protein UspA;protein_id=WJG92685.1;transl_table=11 CP118132.1 Genbank gene 4056637 4056972 . + . ID=gene-PUW35_19660;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=PUW35_19660 CP118132.1 Protein Homology CDS 4056637 4056972 . + 0 ID=cds-WJG92686.1;Parent=gene-PUW35_19660;Dbxref=NCBI_GP:WJG92686.1;Name=WJG92686.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=PUW35_19660;product=universal stress protein UspB;protein_id=WJG92686.1;transl_table=11 CP118132.1 Genbank gene 4057113 4058609 . - . ID=gene-PUW35_19665;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=PUW35_19665 CP118132.1 Protein Homology CDS 4057113 4058609 . - 0 ID=cds-WJG92687.1;Parent=gene-PUW35_19665;Dbxref=NCBI_GP:WJG92687.1;Name=WJG92687.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=PUW35_19665;product=inorganic phosphate transporter PitA;protein_id=WJG92687.1;transl_table=11 CP118132.1 Genbank gene 4058840 4060036 . + . ID=gene-PUW35_19670;Name=PUW35_19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19670 CP118132.1 Protein Homology CDS 4058840 4060036 . + 0 ID=cds-WJG92688.1;Parent=gene-PUW35_19670;Dbxref=NCBI_GP:WJG92688.1;Name=WJG92688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=PUW35_19670;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WJG92688.1;transl_table=11 CP118132.1 Genbank gene 4060342 4061409 . + . ID=gene-PUW35_19675;Name=PUW35_19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19675 CP118132.1 Protein Homology CDS 4060342 4061409 . + 0 ID=cds-WJG92689.1;Parent=gene-PUW35_19675;Dbxref=NCBI_GP:WJG92689.1;Name=WJG92689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=PUW35_19675;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WJG92689.1;transl_table=11 CP118132.1 Genbank gene 4061406 4064147 . + . ID=gene-PUW35_19680;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=PUW35_19680 CP118132.1 Protein Homology CDS 4061406 4064147 . + 0 ID=cds-WJG92690.1;Parent=gene-PUW35_19680;Dbxref=NCBI_GP:WJG92690.1;Name=WJG92690.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=PUW35_19680;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WJG92690.1;transl_table=11 CP118132.1 Genbank gene 4064147 4065271 . + . ID=gene-PUW35_19685;Name=PUW35_19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19685 CP118132.1 Protein Homology CDS 4064147 4065271 . + 0 ID=cds-WJG92691.1;Parent=gene-PUW35_19685;Dbxref=NCBI_GP:WJG92691.1;Name=WJG92691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=PUW35_19685;product=ABC transporter permease;protein_id=WJG92691.1;transl_table=11 CP118132.1 Genbank gene 4065360 4065761 . - . ID=gene-PUW35_19690;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=PUW35_19690 CP118132.1 Protein Homology CDS 4065360 4065761 . - 0 ID=cds-WJG92692.1;Parent=gene-PUW35_19690;Dbxref=NCBI_GP:WJG92692.1;Name=WJG92692.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=PUW35_19690;product=nickel-responsive transcriptional regulator NikR;protein_id=WJG92692.1;transl_table=11 CP118132.1 Genbank gene 4065853 4066431 . - . ID=gene-PUW35_19695;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=PUW35_19695 CP118132.1 Protein Homology CDS 4065853 4066431 . - 0 ID=cds-WJG92693.1;Parent=gene-PUW35_19695;Dbxref=NCBI_GP:WJG92693.1;Name=WJG92693.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=PUW35_19695;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WJG92693.1;transl_table=11 CP118132.1 Genbank gene 4066483 4067532 . - . ID=gene-PUW35_19700;Name=PUW35_19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19700 CP118132.1 Protein Homology CDS 4066483 4067532 . - 0 ID=cds-WJG92694.1;Parent=gene-PUW35_19700;Dbxref=NCBI_GP:WJG92694.1;Name=WJG92694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=PUW35_19700;product=AI-2E family transporter;protein_id=WJG92694.1;transl_table=11 CP118132.1 Genbank gene 4067622 4068881 . + . ID=gene-PUW35_19705;Name=PUW35_19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19705 CP118132.1 Protein Homology CDS 4067622 4068881 . + 0 ID=cds-WJG92695.1;Parent=gene-PUW35_19705;Dbxref=NCBI_GP:WJG92695.1;Name=WJG92695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=PUW35_19705;product=MFS transporter;protein_id=WJG92695.1;transl_table=11 CP118132.1 Genbank gene 4068885 4069442 . - . ID=gene-PUW35_19710;Name=PUW35_19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19710 CP118132.1 Protein Homology CDS 4068885 4069442 . - 0 ID=cds-WJG92696.1;Parent=gene-PUW35_19710;Dbxref=NCBI_GP:WJG92696.1;Name=WJG92696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=PUW35_19710;product=DcrB family lipoprotein;protein_id=WJG92696.1;transl_table=11 CP118132.1 Genbank gene 4069515 4070180 . - . ID=gene-PUW35_19715;Name=PUW35_19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19715 CP118132.1 Protein Homology CDS 4069515 4070180 . - 0 ID=cds-WJG92697.1;Parent=gene-PUW35_19715;Dbxref=NCBI_GP:WJG92697.1;Name=WJG92697.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=PUW35_19715;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WJG92697.1;transl_table=11 CP118132.1 Genbank gene 4070350 4070595 . + . ID=gene-PUW35_19720;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=PUW35_19720 CP118132.1 Protein Homology CDS 4070350 4070595 . + 0 ID=cds-WJG95155.1;Parent=gene-PUW35_19720;Dbxref=NCBI_GP:WJG95155.1;Name=WJG95155.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=PUW35_19720;product=sulfurtransferase TusA;protein_id=WJG95155.1;transl_table=11 CP118132.1 Genbank gene 4070619 4072262 . - . ID=gene-PUW35_19725;Name=PUW35_19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19725 CP118132.1 Protein Homology CDS 4070619 4072262 . - 0 ID=cds-WJG92698.1;Parent=gene-PUW35_19725;Dbxref=NCBI_GP:WJG92698.1;Name=WJG92698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=PUW35_19725;product=methyl-accepting chemotaxis citrate transducer;protein_id=WJG92698.1;transl_table=11 CP118132.1 Genbank gene 4072462 4074660 . - . ID=gene-PUW35_19730;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=PUW35_19730 CP118132.1 Protein Homology CDS 4072462 4074660 . - 0 ID=cds-WJG92699.1;Parent=gene-PUW35_19730;Dbxref=NCBI_GP:WJG92699.1;Name=WJG92699.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=PUW35_19730;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WJG92699.1;transl_table=11 CP118132.1 Genbank gene 4074741 4075367 . - . ID=gene-PUW35_19735;Name=PUW35_19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19735 CP118132.1 Protein Homology CDS 4074741 4075367 . - 0 ID=cds-WJG92700.1;Parent=gene-PUW35_19735;Dbxref=NCBI_GP:WJG92700.1;Name=WJG92700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=PUW35_19735;product=lysoplasmalogenase;protein_id=WJG92700.1;transl_table=11 CP118132.1 Genbank gene 4075509 4075880 . + . ID=gene-PUW35_19740;Name=PUW35_19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19740 CP118132.1 Protein Homology CDS 4075509 4075880 . + 0 ID=cds-WJG92701.1;Parent=gene-PUW35_19740;Dbxref=NCBI_GP:WJG92701.1;Name=WJG92701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=PUW35_19740;product=DUF2500 domain-containing protein;protein_id=WJG92701.1;transl_table=11 CP118132.1 Genbank gene 4075902 4076171 . - . ID=gene-PUW35_19745;Name=PUW35_19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19745 CP118132.1 Protein Homology CDS 4075902 4076171 . - 0 ID=cds-WJG95156.1;Parent=gene-PUW35_19745;Dbxref=NCBI_GP:WJG95156.1;Name=WJG95156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=PUW35_19745;product=DUF1145 family protein;protein_id=WJG95156.1;transl_table=11 CP118132.1 Genbank gene 4076161 4076757 . - . ID=gene-PUW35_19750;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=PUW35_19750 CP118132.1 Protein Homology CDS 4076161 4076757 . - 0 ID=cds-WJG92702.1;Parent=gene-PUW35_19750;Dbxref=NCBI_GP:WJG92702.1;Name=WJG92702.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=PUW35_19750;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WJG92702.1;transl_table=11 CP118132.1 Genbank gene 4076883 4078358 . + . ID=gene-PUW35_19755;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=PUW35_19755 CP118132.1 Protein Homology CDS 4076883 4078358 . + 0 ID=cds-WJG92703.1;Parent=gene-PUW35_19755;Dbxref=NCBI_GP:WJG92703.1;Name=WJG92703.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=PUW35_19755;product=signal recognition particle-docking protein FtsY;protein_id=WJG92703.1;transl_table=11 CP118132.1 Genbank gene 4078361 4079029 . + . ID=gene-PUW35_19760;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=PUW35_19760 CP118132.1 Protein Homology CDS 4078361 4079029 . + 0 ID=cds-WJG92704.1;Parent=gene-PUW35_19760;Dbxref=NCBI_GP:WJG92704.1;Name=WJG92704.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=PUW35_19760;product=cell division ATP-binding protein FtsE;protein_id=WJG92704.1;transl_table=11 CP118132.1 Genbank gene 4079022 4080077 . + . ID=gene-PUW35_19765;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=PUW35_19765 CP118132.1 Protein Homology CDS 4079022 4080077 . + 0 ID=cds-WJG92705.1;Parent=gene-PUW35_19765;Dbxref=NCBI_GP:WJG92705.1;Name=WJG92705.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=PUW35_19765;product=permease-like cell division protein FtsX;protein_id=WJG92705.1;transl_table=11 CP118132.1 Genbank pseudogene 4080323 4081176 . + . ID=gene-PUW35_19770;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=pseudogene;locus_tag=PUW35_19770;pseudo=true CP118132.1 Protein Homology CDS 4080323 4081176 . + 0 ID=cds-PUW35_19770;Parent=gene-PUW35_19770;Note=frameshifted;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=PUW35_19770;product=RNA polymerase sigma factor RpoH;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4081498 4082601 . + . ID=gene-PUW35_19775;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=PUW35_19775 CP118132.1 Protein Homology CDS 4081498 4082601 . + 0 ID=cds-WJG92706.1;Parent=gene-PUW35_19775;Dbxref=NCBI_GP:WJG92706.1;Name=WJG92706.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=PUW35_19775;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WJG92706.1;transl_table=11 CP118132.1 Genbank gene 4082685 4082819 . - . ID=gene-PUW35_19780;Name=PUW35_19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19780 CP118132.1 Protein Homology CDS 4082685 4082819 . - 0 ID=cds-WJG92707.1;Parent=gene-PUW35_19780;Dbxref=NCBI_GP:WJG92707.1;Name=WJG92707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=PUW35_19780;product=hypothetical protein;protein_id=WJG92707.1;transl_table=11 CP118132.1 Genbank gene 4082797 4083180 . - . ID=gene-PUW35_19785;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=PUW35_19785 CP118132.1 Protein Homology CDS 4082797 4083180 . - 0 ID=cds-WJG92708.1;Parent=gene-PUW35_19785;Dbxref=NCBI_GP:WJG92708.1;Name=WJG92708.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=PUW35_19785;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WJG92708.1;transl_table=11 CP118132.1 Genbank gene 4083601 4084710 . + . ID=gene-PUW35_19790;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=PUW35_19790 CP118132.1 Protein Homology CDS 4083601 4084710 . + 0 ID=cds-WJG92709.1;Parent=gene-PUW35_19790;Dbxref=NCBI_GP:WJG92709.1;Name=WJG92709.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=PUW35_19790;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WJG92709.1;transl_table=11 CP118132.1 Genbank gene 4084770 4085696 . + . ID=gene-PUW35_19795;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=PUW35_19795 CP118132.1 Protein Homology CDS 4084770 4085696 . + 0 ID=cds-WJG92710.1;Parent=gene-PUW35_19795;Dbxref=NCBI_GP:WJG92710.1;Name=WJG92710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=PUW35_19795;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WJG92710.1;transl_table=11 CP118132.1 Genbank gene 4085693 4086970 . + . ID=gene-PUW35_19800;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=PUW35_19800 CP118132.1 Protein Homology CDS 4085693 4086970 . + 0 ID=cds-WJG92711.1;Parent=gene-PUW35_19800;Dbxref=NCBI_GP:WJG92711.1;Name=WJG92711.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=PUW35_19800;product=branched chain amino acid ABC transporter permease LivM;protein_id=WJG92711.1;transl_table=11 CP118132.1 Genbank gene 4086967 4087734 . + . ID=gene-PUW35_19805;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=PUW35_19805 CP118132.1 Protein Homology CDS 4086967 4087734 . + 0 ID=cds-WJG92712.1;Parent=gene-PUW35_19805;Dbxref=NCBI_GP:WJG92712.1;Name=WJG92712.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=PUW35_19805;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WJG92712.1;transl_table=11 CP118132.1 Genbank gene 4087736 4088449 . + . ID=gene-PUW35_19810;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=PUW35_19810 CP118132.1 Protein Homology CDS 4087736 4088449 . + 0 ID=cds-WJG92713.1;Parent=gene-PUW35_19810;Dbxref=NCBI_GP:WJG92713.1;Name=WJG92713.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=PUW35_19810;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WJG92713.1;transl_table=11 CP118132.1 Genbank gene 4088580 4088801 . + . ID=gene-PUW35_19815;Name=PUW35_19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19815 CP118132.1 Protein Homology CDS 4088580 4088801 . + 0 ID=cds-WJG92714.1;Parent=gene-PUW35_19815;Dbxref=NCBI_GP:WJG92714.1;Name=WJG92714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=PUW35_19815;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WJG92714.1;transl_table=11 CP118132.1 Genbank gene 4088798 4089166 . + . ID=gene-PUW35_19820;Name=PUW35_19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19820 CP118132.1 Protein Homology CDS 4088798 4089166 . + 0 ID=cds-WJG92715.1;Parent=gene-PUW35_19820;Dbxref=NCBI_GP:WJG92715.1;Name=WJG92715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=PUW35_19820;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WJG92715.1;transl_table=11 CP118132.1 Genbank gene 4089425 4090741 . + . ID=gene-PUW35_19825;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=PUW35_19825 CP118132.1 Protein Homology CDS 4089425 4090741 . + 0 ID=cds-WJG92716.1;Parent=gene-PUW35_19825;Dbxref=NCBI_GP:WJG92716.1;Name=WJG92716.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=PUW35_19825;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WJG92716.1;transl_table=11 CP118132.1 Genbank gene 4090846 4091733 . + . ID=gene-PUW35_19830;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=PUW35_19830 CP118132.1 Protein Homology CDS 4090846 4091733 . + 0 ID=cds-WJG92717.1;Parent=gene-PUW35_19830;Dbxref=NCBI_GP:WJG92717.1;Name=WJG92717.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=PUW35_19830;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WJG92717.1;transl_table=11 CP118132.1 Genbank gene 4091730 4092575 . + . ID=gene-PUW35_19835;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=PUW35_19835 CP118132.1 Protein Homology CDS 4091730 4092575 . + 0 ID=cds-WJG92718.1;Parent=gene-PUW35_19835;Dbxref=NCBI_GP:WJG92718.1;Name=WJG92718.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=PUW35_19835;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WJG92718.1;transl_table=11 CP118132.1 Genbank gene 4092577 4093647 . + . ID=gene-PUW35_19840;Name=PUW35_19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19840 CP118132.1 Protein Homology CDS 4092577 4093647 . + 0 ID=cds-WJG92719.1;Parent=gene-PUW35_19840;Dbxref=NCBI_GP:WJG92719.1;Name=WJG92719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=PUW35_19840;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WJG92719.1;transl_table=11 CP118132.1 Genbank gene 4093644 4094384 . + . ID=gene-PUW35_19845;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=PUW35_19845 CP118132.1 Protein Homology CDS 4093644 4094384 . + 0 ID=cds-WJG92720.1;Parent=gene-PUW35_19845;Dbxref=NCBI_GP:WJG92720.1;Name=WJG92720.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=PUW35_19845;product=glycerophosphodiester phosphodiesterase;protein_id=WJG92720.1;transl_table=11 CP118132.1 Genbank gene 4094397 4094813 . - . ID=gene-PUW35_19850;Name=PUW35_19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19850 CP118132.1 Protein Homology CDS 4094397 4094813 . - 0 ID=cds-WJG92721.1;Parent=gene-PUW35_19850;Dbxref=NCBI_GP:WJG92721.1;Name=WJG92721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=PUW35_19850;product=DUF2756 family protein;protein_id=WJG92721.1;transl_table=11 CP118132.1 Genbank gene 4094939 4096681 . + . ID=gene-PUW35_19855;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=PUW35_19855 CP118132.1 Protein Homology CDS 4094939 4096681 . + 0 ID=cds-WJG92722.1;Parent=gene-PUW35_19855;Dbxref=NCBI_GP:WJG92722.1;Name=WJG92722.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=PUW35_19855;product=gamma-glutamyltransferase;protein_id=WJG92722.1;transl_table=11 CP118132.1 Genbank pseudogene 4096726 4097759 . - . ID=gene-PUW35_19860;Name=PUW35_19860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19860;pseudo=true CP118132.1 Protein Homology CDS 4096726 4097759 . - 0 ID=cds-PUW35_19860;Parent=gene-PUW35_19860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=PUW35_19860;product=phosphotriesterase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4097756 4098727 . - . ID=gene-PUW35_19865;Name=PUW35_19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19865 CP118132.1 Protein Homology CDS 4097756 4098727 . - 0 ID=cds-WJG92723.1;Parent=gene-PUW35_19865;Dbxref=NCBI_GP:WJG92723.1;Name=WJG92723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=PUW35_19865;product=DMT family transporter;protein_id=WJG92723.1;transl_table=11 CP118132.1 Genbank gene 4098781 4099542 . - . ID=gene-PUW35_19870;Name=PUW35_19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19870 CP118132.1 Protein Homology CDS 4098781 4099542 . - 0 ID=cds-WJG92724.1;Parent=gene-PUW35_19870;Dbxref=NCBI_GP:WJG92724.1;Name=WJG92724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=PUW35_19870;product=glutamine amidotransferase;protein_id=WJG92724.1;transl_table=11 CP118132.1 Genbank pseudogene 4099558 4100771 . - . ID=gene-PUW35_19875;Name=PUW35_19875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19875;pseudo=true CP118132.1 Protein Homology CDS 4099558 4100771 . - 0 ID=cds-PUW35_19875;Parent=gene-PUW35_19875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=PUW35_19875;product=PfkB family carbohydrate kinase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4101036 4101524 . - . ID=gene-PUW35_19880;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=PUW35_19880 CP118132.1 Protein Homology CDS 4101036 4101524 . - 0 ID=cds-WJG92725.1;Parent=gene-PUW35_19880;Dbxref=NCBI_GP:WJG92725.1;Name=WJG92725.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=PUW35_19880;product=N-acetyltransferase;protein_id=WJG92725.1;transl_table=11 CP118132.1 Genbank gene 4101991 4103028 . + . ID=gene-PUW35_19885;Name=PUW35_19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19885 CP118132.1 Protein Homology CDS 4101991 4103028 . + 0 ID=cds-WJG92726.1;Parent=gene-PUW35_19885;Dbxref=NCBI_GP:WJG92726.1;Name=WJG92726.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=PUW35_19885;product=oxidoreductase;protein_id=WJG92726.1;transl_table=11 CP118132.1 Genbank gene 4103152 4103847 . + . ID=gene-PUW35_19890;Name=PUW35_19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19890 CP118132.1 Protein Homology CDS 4103152 4103847 . + 0 ID=cds-WJG92727.1;Parent=gene-PUW35_19890;Dbxref=NCBI_GP:WJG92727.1;Name=WJG92727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=PUW35_19890;product=pirin family protein;protein_id=WJG92727.1;transl_table=11 CP118132.1 Genbank gene 4104218 4105213 . + . ID=gene-PUW35_19895;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=PUW35_19895 CP118132.1 Protein Homology CDS 4104218 4105213 . + 0 ID=cds-WJG92728.1;Parent=gene-PUW35_19895;Dbxref=NCBI_GP:WJG92728.1;Name=WJG92728.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=PUW35_19895;product=gluconate operon transcriptional repressor GntR;protein_id=WJG92728.1;transl_table=11 CP118132.1 Genbank gene 4105352 4105885 . + . ID=gene-PUW35_19900;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=PUW35_19900 CP118132.1 Protein Homology CDS 4105352 4105885 . + 0 ID=cds-WJG92729.1;Parent=gene-PUW35_19900;Dbxref=NCBI_GP:WJG92729.1;Name=WJG92729.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=PUW35_19900;product=gluconokinase;protein_id=WJG92729.1;transl_table=11 CP118132.1 Genbank gene 4105882 4107222 . + . ID=gene-PUW35_19905;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=PUW35_19905 CP118132.1 Protein Homology CDS 4105882 4107222 . + 0 ID=cds-WJG92730.1;Parent=gene-PUW35_19905;Dbxref=NCBI_GP:WJG92730.1;Name=WJG92730.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=PUW35_19905;product=gluconate transporter;protein_id=WJG92730.1;transl_table=11 CP118132.1 Genbank pseudogene 4107145 4107519 . - . ID=gene-PUW35_19910;Name=PUW35_19910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19910;pseudo=true CP118132.1 Protein Homology CDS 4107145 4107519 . - 0 ID=cds-PUW35_19910;Parent=gene-PUW35_19910;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=PUW35_19910;product=MarC family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4107706 4108595 . + . ID=gene-PUW35_19915;Name=asd;gbkey=Gene;gene=asd;gene_biotype=pseudogene;locus_tag=PUW35_19915;pseudo=true CP118132.1 Protein Homology CDS 4107706 4108595 . + 0 ID=cds-PUW35_19915;Parent=gene-PUW35_19915;Note=frameshifted;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: protein motif:HMM:NF005144.0;locus_tag=PUW35_19915;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4108517 4108750 . + . ID=gene-PUW35_19920;Name=PUW35_19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19920 CP118132.1 Protein Homology CDS 4108517 4108750 . + 0 ID=cds-WJG92731.1;Parent=gene-PUW35_19920;Dbxref=NCBI_GP:WJG92731.1;Name=WJG92731.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: protein motif:HMM:NF014793.2;locus_tag=PUW35_19920;product=Asd/ArgC dimerization domain-containing protein;protein_id=WJG92731.1;transl_table=11 CP118132.1 Genbank pseudogene 4109097 4111231 . + . ID=gene-PUW35_19925;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=pseudogene;locus_tag=PUW35_19925;pseudo=true CP118132.1 Protein Homology CDS 4109097 4111231 . + 0 ID=cds-PUW35_19925;Parent=gene-PUW35_19925;Note=frameshifted;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=PUW35_19925;product=1%2C4-alpha-glucan branching enzyme;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4111228 4113204 . + . ID=gene-PUW35_19930;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PUW35_19930 CP118132.1 Protein Homology CDS 4111228 4113204 . + 0 ID=cds-WJG92732.1;Parent=gene-PUW35_19930;Dbxref=NCBI_GP:WJG92732.1;Name=WJG92732.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=PUW35_19930;product=glycogen debranching protein GlgX;protein_id=WJG92732.1;transl_table=11 CP118132.1 Genbank pseudogene 4113219 4114503 . + . ID=gene-PUW35_19935;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=pseudogene;locus_tag=PUW35_19935;pseudo=true CP118132.1 Protein Homology CDS 4113219 4114503 . + 0 ID=cds-PUW35_19935;Parent=gene-PUW35_19935;Note=frameshifted;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=PUW35_19935;product=glucose-1-phosphate adenylyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4114503 4115938 . + . ID=gene-PUW35_19940;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=pseudogene;locus_tag=PUW35_19940;pseudo=true CP118132.1 Protein Homology CDS 4114503 4115938 . + 0 ID=cds-PUW35_19940;Parent=gene-PUW35_19940;Note=frameshifted;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=PUW35_19940;product=glycogen synthase GlgA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4115958 4118405 . + . ID=gene-PUW35_19945;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=PUW35_19945 CP118132.1 Protein Homology CDS 4115958 4118405 . + 0 ID=cds-WJG92733.1;Parent=gene-PUW35_19945;Dbxref=NCBI_GP:WJG92733.1;Name=WJG92733.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=PUW35_19945;product=glycogen phosphorylase;protein_id=WJG92733.1;transl_table=11 CP118132.1 Genbank gene 4118583 4119338 . + . ID=gene-PUW35_19950;Name=PUW35_19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19950 CP118132.1 Protein Homology CDS 4118583 4119338 . + 0 ID=cds-WJG92734.1;Parent=gene-PUW35_19950;Dbxref=NCBI_GP:WJG92734.1;Name=WJG92734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=PUW35_19950;product=IclR family transcriptional regulator;protein_id=WJG92734.1;transl_table=11 CP118132.1 Genbank pseudogene 4119382 4120286 . - . ID=gene-PUW35_19955;Name=PUW35_19955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_19955;pseudo=true CP118132.1 Protein Homology CDS 4119382 4120286 . - 0 ID=cds-PUW35_19955;Parent=gene-PUW35_19955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=PUW35_19955;product=dihydrodipicolinate synthase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4120330 4122045 . - . ID=gene-PUW35_19960;Name=PUW35_19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19960 CP118132.1 Protein Homology CDS 4120330 4122045 . - 0 ID=cds-WJG92735.1;Parent=gene-PUW35_19960;Dbxref=NCBI_GP:WJG92735.1;Name=WJG92735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=PUW35_19960;product=dihydroxy-acid dehydratase;protein_id=WJG92735.1;transl_table=11 CP118132.1 Genbank gene 4122042 4123376 . - . ID=gene-PUW35_19965;Name=PUW35_19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19965 CP118132.1 Protein Homology CDS 4122042 4123376 . - 0 ID=cds-WJG92736.1;Parent=gene-PUW35_19965;Dbxref=NCBI_GP:WJG92736.1;Name=WJG92736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=PUW35_19965;product=MFS transporter;protein_id=WJG92736.1;transl_table=11 CP118132.1 Genbank gene 4123714 4124823 . + . ID=gene-PUW35_19970;Name=PUW35_19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19970 CP118132.1 Protein Homology CDS 4123714 4124823 . + 0 ID=cds-WJG92737.1;Parent=gene-PUW35_19970;Dbxref=NCBI_GP:WJG92737.1;Name=WJG92737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=PUW35_19970;product=glycerol dehydrogenase;protein_id=WJG92737.1;transl_table=11 CP118132.1 Genbank gene 4124981 4126477 . + . ID=gene-PUW35_19975;Name=PUW35_19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19975 CP118132.1 Protein Homology CDS 4124981 4126477 . + 0 ID=cds-WJG92738.1;Parent=gene-PUW35_19975;Dbxref=NCBI_GP:WJG92738.1;Name=WJG92738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=PUW35_19975;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WJG92738.1;transl_table=11 CP118132.1 Genbank gene 4126487 4127032 . + . ID=gene-PUW35_19980;Name=PUW35_19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_19980 CP118132.1 Protein Homology CDS 4126487 4127032 . + 0 ID=cds-WJG92739.1;Parent=gene-PUW35_19980;Dbxref=NCBI_GP:WJG92739.1;Name=WJG92739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=PUW35_19980;product=hypothetical protein;protein_id=WJG92739.1;transl_table=11 CP118132.1 Genbank gene 4127079 4128587 . - . ID=gene-PUW35_19985;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=PUW35_19985 CP118132.1 Protein Homology CDS 4127079 4128587 . - 0 ID=cds-WJG92740.1;Parent=gene-PUW35_19985;Dbxref=NCBI_GP:WJG92740.1;Name=WJG92740.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=PUW35_19985;product=glycerol-3-phosphate dehydrogenase;protein_id=WJG92740.1;transl_table=11 CP118132.1 Genbank gene 4128786 4129112 . + . ID=gene-PUW35_19990;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=PUW35_19990 CP118132.1 Protein Homology CDS 4128786 4129112 . + 0 ID=cds-WJG92741.1;Parent=gene-PUW35_19990;Dbxref=NCBI_GP:WJG92741.1;Name=WJG92741.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=PUW35_19990;product=thiosulfate sulfurtransferase GlpE;protein_id=WJG92741.1;transl_table=11 CP118132.1 Genbank gene 4129188 4130018 . + . ID=gene-PUW35_19995;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=PUW35_19995 CP118132.1 Protein Homology CDS 4129188 4130018 . + 0 ID=cds-WJG92742.1;Parent=gene-PUW35_19995;Dbxref=NCBI_GP:WJG92742.1;Name=WJG92742.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=PUW35_19995;product=rhomboid family intramembrane serine protease GlpG;protein_id=WJG92742.1;transl_table=11 CP118132.1 Genbank gene 4130112 4130870 . + . ID=gene-PUW35_20000;Name=PUW35_20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20000 CP118132.1 Protein Homology CDS 4130112 4130870 . + 0 ID=cds-WJG92743.1;Parent=gene-PUW35_20000;Dbxref=NCBI_GP:WJG92743.1;Name=WJG92743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=PUW35_20000;product=DeoR/GlpR family transcriptional regulator;protein_id=WJG92743.1;transl_table=11 CP118132.1 Genbank gene 4130867 4132450 . - . ID=gene-PUW35_20005;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=PUW35_20005 CP118132.1 Protein Homology CDS 4130867 4132450 . - 0 ID=cds-WJG92744.1;Parent=gene-PUW35_20005;Dbxref=NCBI_GP:WJG92744.1;Name=WJG92744.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=PUW35_20005;product=RNA repair transcriptional activator RtcR;protein_id=WJG92744.1;transl_table=11 CP118132.1 Genbank gene 4132640 4134193 . + . ID=gene-PUW35_20010;Name=PUW35_20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20010 CP118132.1 Protein Homology CDS 4132640 4134193 . + 0 ID=cds-WJG92745.1;Parent=gene-PUW35_20010;Dbxref=NCBI_GP:WJG92745.1;Name=WJG92745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=PUW35_20010;product=TROVE domain-containing protein;protein_id=WJG92745.1;transl_table=11 CP118132.1 Genbank gene 4134540 4135754 . + . ID=gene-PUW35_20015;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=PUW35_20015 CP118132.1 Protein Homology CDS 4134540 4135754 . + 0 ID=cds-WJG95157.1;Parent=gene-PUW35_20015;Dbxref=NCBI_GP:WJG95157.1;Name=WJG95157.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=PUW35_20015;product=RNA-splicing ligase RtcB;protein_id=WJG95157.1;transl_table=11 CP118132.1 Genbank gene 4135758 4136777 . + . ID=gene-PUW35_20020;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=PUW35_20020 CP118132.1 Protein Homology CDS 4135758 4136777 . + 0 ID=cds-WJG92746.1;Parent=gene-PUW35_20020;Dbxref=NCBI_GP:WJG92746.1;Name=WJG92746.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462421.1;locus_tag=PUW35_20020;product=RNA 3'-terminal phosphate cyclase;protein_id=WJG92746.1;transl_table=11 CP118132.1 Genbank gene 4136886 4137146 . + . ID=gene-PUW35_20025;Name=PUW35_20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20025 CP118132.1 Protein Homology CDS 4136886 4137146 . + 0 ID=cds-WJG92747.1;Parent=gene-PUW35_20025;Dbxref=NCBI_GP:WJG92747.1;Name=WJG92747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462420.1;locus_tag=PUW35_20025;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WJG92747.1;transl_table=11 CP118132.1 Genbank gene 4137149 4137424 . + . ID=gene-PUW35_20030;Name=PUW35_20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20030 CP118132.1 Protein Homology CDS 4137149 4137424 . + 0 ID=cds-WJG92748.1;Parent=gene-PUW35_20030;Dbxref=NCBI_GP:WJG92748.1;Name=WJG92748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462419.1;locus_tag=PUW35_20030;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WJG92748.1;transl_table=11 CP118132.1 Genbank gene 4137512 4140217 . - . ID=gene-PUW35_20035;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=PUW35_20035 CP118132.1 Protein Homology CDS 4137512 4140217 . - 0 ID=cds-WJG92749.1;Parent=gene-PUW35_20035;Dbxref=NCBI_GP:WJG92749.1;Name=WJG92749.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=PUW35_20035;product=HTH-type transcriptional regulator MalT;protein_id=WJG92749.1;transl_table=11 CP118132.1 Genbank gene 4140811 4143204 . + . ID=gene-PUW35_20040;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=PUW35_20040 CP118132.1 Protein Homology CDS 4140811 4143204 . + 0 ID=cds-WJG92750.1;Parent=gene-PUW35_20040;Dbxref=NCBI_GP:WJG92750.1;Name=WJG92750.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=PUW35_20040;product=maltodextrin phosphorylase;protein_id=WJG92750.1;transl_table=11 CP118132.1 Genbank gene 4143214 4145292 . + . ID=gene-PUW35_20045;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=PUW35_20045 CP118132.1 Protein Homology CDS 4143214 4145292 . + 0 ID=cds-WJG92751.1;Parent=gene-PUW35_20045;Dbxref=NCBI_GP:WJG92751.1;Name=WJG92751.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=PUW35_20045;product=4-alpha-glucanotransferase;protein_id=WJG92751.1;transl_table=11 CP118132.1 Genbank pseudogene 4145411 4146726 . - . ID=gene-PUW35_20050;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=pseudogene;locus_tag=PUW35_20050;pseudo=true CP118132.1 Protein Homology CDS 4145411 4146726 . - 0 ID=cds-PUW35_20050;Parent=gene-PUW35_20050;Note=frameshifted;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=PUW35_20050;product=gluconate transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4147103 4147678 . - . ID=gene-PUW35_20055;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=PUW35_20055 CP118132.1 Protein Homology CDS 4147103 4147678 . - 0 ID=cds-WJG92752.1;Parent=gene-PUW35_20055;Dbxref=NCBI_GP:WJG92752.1;Name=WJG92752.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=PUW35_20055;product=Fe-S biogenesis protein NfuA;protein_id=WJG92752.1;transl_table=11 CP118132.1 Genbank gene 4147737 4148420 . - . ID=gene-PUW35_20060;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=PUW35_20060 CP118132.1 Protein Homology CDS 4147737 4148420 . - 0 ID=cds-WJG92753.1;Parent=gene-PUW35_20060;Dbxref=NCBI_GP:WJG92753.1;Name=WJG92753.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=PUW35_20060;product=DNA utilization protein GntX;protein_id=WJG92753.1;transl_table=11 CP118132.1 Genbank gene 4148458 4149228 . + . ID=gene-PUW35_20065;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=PUW35_20065 CP118132.1 Protein Homology CDS 4148458 4149228 . + 0 ID=cds-WJG92754.1;Parent=gene-PUW35_20065;Dbxref=NCBI_GP:WJG92754.1;Name=WJG92754.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=PUW35_20065;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WJG92754.1;transl_table=11 CP118132.1 Genbank gene 4149264 4150190 . - . ID=gene-PUW35_20070;Name=PUW35_20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20070 CP118132.1 Protein Homology CDS 4149264 4150190 . - 0 ID=cds-WJG92755.1;Parent=gene-PUW35_20070;Dbxref=NCBI_GP:WJG92755.1;Name=WJG92755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=PUW35_20070;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG92755.1;transl_table=11 CP118132.1 Genbank gene 4150425 4150661 . - . ID=gene-PUW35_20075;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=PUW35_20075 CP118132.1 Protein Homology CDS 4150425 4150661 . - 0 ID=cds-WJG92756.1;Parent=gene-PUW35_20075;Dbxref=NCBI_GP:WJG92756.1;Name=WJG92756.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=PUW35_20075;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WJG92756.1;transl_table=11 CP118132.1 Genbank gene 4150674 4152992 . - . ID=gene-PUW35_20080;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=PUW35_20080 CP118132.1 Protein Homology CDS 4150674 4152992 . - 0 ID=cds-WJG92757.1;Parent=gene-PUW35_20080;Dbxref=NCBI_GP:WJG92757.1;Name=WJG92757.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=PUW35_20080;product=Fe(2+) transporter permease subunit FeoB;protein_id=WJG92757.1;transl_table=11 CP118132.1 Genbank gene 4153011 4153238 . - . ID=gene-PUW35_20085;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=PUW35_20085 CP118132.1 Protein Homology CDS 4153011 4153238 . - 0 ID=cds-WJG92758.1;Parent=gene-PUW35_20085;Dbxref=NCBI_GP:WJG92758.1;Name=WJG92758.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=PUW35_20085;product=ferrous iron transporter A;protein_id=WJG92758.1;transl_table=11 CP118132.1 Genbank gene 4153675 4156005 . - . ID=gene-PUW35_20090;Name=PUW35_20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20090 CP118132.1 Protein Homology CDS 4153675 4156005 . - 0 ID=cds-WJG92759.1;Parent=gene-PUW35_20090;Dbxref=NCBI_GP:WJG92759.1;Name=WJG92759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=PUW35_20090;product=Tex family protein;protein_id=WJG92759.1;transl_table=11 CP118132.1 Genbank gene 4156104 4156577 . - . ID=gene-PUW35_20095;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=PUW35_20095 CP118132.1 Protein Homology CDS 4156104 4156577 . - 0 ID=cds-WJG92760.1;Parent=gene-PUW35_20095;Dbxref=NCBI_GP:WJG92760.1;Name=WJG92760.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=PUW35_20095;product=transcription elongation factor GreB;protein_id=WJG92760.1;transl_table=11 CP118132.1 Genbank gene 4156803 4157237 . + . ID=gene-PUW35_20100;Name=PUW35_20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20100 CP118132.1 Protein Homology CDS 4156803 4157237 . + 0 ID=cds-WJG92761.1;Parent=gene-PUW35_20100;Dbxref=NCBI_GP:WJG92761.1;Name=WJG92761.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PUW35_20100;product=response regulator;protein_id=WJG92761.1;transl_table=11 CP118132.1 Genbank gene 4157255 4157521 . + . ID=gene-PUW35_20105;Name=PUW35_20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20105 CP118132.1 Protein Homology CDS 4157255 4157521 . + 0 ID=cds-WJG92762.1;Parent=gene-PUW35_20105;Dbxref=NCBI_GP:WJG92762.1;Name=WJG92762.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002423495.1;locus_tag=PUW35_20105;product=winged helix-turn-helix domain-containing protein;protein_id=WJG92762.1;transl_table=11 CP118132.1 Genbank gene 4157518 4158870 . + . ID=gene-PUW35_20110;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=PUW35_20110 CP118132.1 Protein Homology CDS 4157518 4158870 . + 0 ID=cds-WJG92763.1;Parent=gene-PUW35_20110;Dbxref=NCBI_GP:WJG92763.1;Name=WJG92763.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=PUW35_20110;product=two-component system sensor histidine kinase EnvZ;protein_id=WJG92763.1;transl_table=11 CP118132.1 Genbank gene 4158945 4160564 . - . ID=gene-PUW35_20115;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=PUW35_20115 CP118132.1 Protein Homology CDS 4158945 4160564 . - 0 ID=cds-WJG92764.1;Parent=gene-PUW35_20115;Dbxref=NCBI_GP:WJG92764.1;Name=WJG92764.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=PUW35_20115;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WJG92764.1;transl_table=11 CP118132.1 Genbank gene 4160944 4162653 . + . ID=gene-PUW35_20120;Name=PUW35_20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20120 CP118132.1 Protein Homology CDS 4160944 4162653 . + 0 ID=cds-WJG92765.1;Parent=gene-PUW35_20120;Dbxref=NCBI_GP:WJG92765.1;Name=WJG92765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=PUW35_20120;product=DUF4153 domain-containing protein;protein_id=WJG92765.1;transl_table=11 CP118132.1 Genbank gene 4162762 4163640 . - . ID=gene-PUW35_20125;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=PUW35_20125 CP118132.1 Protein Homology CDS 4162762 4163640 . - 0 ID=cds-WJG92766.1;Parent=gene-PUW35_20125;Dbxref=NCBI_GP:WJG92766.1;Name=WJG92766.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=PUW35_20125;product=Hsp33 family molecular chaperone HslO;protein_id=WJG92766.1;transl_table=11 CP118132.1 Genbank gene 4163665 4164066 . - . ID=gene-PUW35_20130;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=PUW35_20130 CP118132.1 Protein Homology CDS 4163665 4164066 . - 0 ID=cds-WJG92767.1;Parent=gene-PUW35_20130;Dbxref=NCBI_GP:WJG92767.1;Name=WJG92767.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=PUW35_20130;product=ribosome-associated heat shock protein Hsp15;protein_id=WJG92767.1;transl_table=11 CP118132.1 Genbank gene 4164077 4164745 . - . ID=gene-PUW35_20135;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=PUW35_20135 CP118132.1 Protein Homology CDS 4164077 4164745 . - 0 ID=cds-WJG92768.1;Parent=gene-PUW35_20135;Dbxref=NCBI_GP:WJG92768.1;Name=WJG92768.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=PUW35_20135;product=GMP/IMP nucleotidase;protein_id=WJG92768.1;transl_table=11 CP118132.1 Genbank gene 4164810 4166942 . - . ID=gene-PUW35_20140;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=PUW35_20140 CP118132.1 Protein Homology CDS 4164810 4166942 . - 0 ID=cds-WJG92769.1;Parent=gene-PUW35_20140;Dbxref=NCBI_GP:WJG92769.1;Name=WJG92769.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=PUW35_20140;product=intracellular growth attenuator protein IgaA;protein_id=WJG92769.1;transl_table=11 CP118132.1 Genbank gene 4167265 4167828 . + . ID=gene-PUW35_20145;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=PUW35_20145 CP118132.1 Protein Homology CDS 4167265 4167828 . + 0 ID=cds-WJG92770.1;Parent=gene-PUW35_20145;Dbxref=NCBI_GP:WJG92770.1;Name=WJG92770.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=PUW35_20145;product=ADP compounds hydrolase NudE;protein_id=WJG92770.1;transl_table=11 CP118132.1 Genbank gene 4167924 4170476 . - . ID=gene-PUW35_20150;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=PUW35_20150 CP118132.1 Protein Homology CDS 4167924 4170476 . - 0 ID=cds-WJG92771.1;Parent=gene-PUW35_20150;Dbxref=NCBI_GP:WJG92771.1;Name=WJG92771.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=PUW35_20150;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WJG92771.1;transl_table=11 CP118132.1 Genbank gene 4170597 4171376 . + . ID=gene-PUW35_20155;Name=PUW35_20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20155 CP118132.1 Protein Homology CDS 4170597 4171376 . + 0 ID=cds-WJG92772.1;Parent=gene-PUW35_20155;Dbxref=NCBI_GP:WJG92772.1;Name=WJG92772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=PUW35_20155;product=DNA utilization protein HofM;protein_id=WJG92772.1;transl_table=11 CP118132.1 Genbank gene 4171376 4171915 . + . ID=gene-PUW35_20160;Name=PUW35_20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20160 CP118132.1 Protein Homology CDS 4171376 4171915 . + 0 ID=cds-WJG92773.1;Parent=gene-PUW35_20160;Dbxref=NCBI_GP:WJG92773.1;Name=WJG92773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=PUW35_20160;product=PilN domain-containing protein;protein_id=WJG92773.1;transl_table=11 CP118132.1 Genbank gene 4171899 4172372 . + . ID=gene-PUW35_20165;Name=PUW35_20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20165 CP118132.1 Protein Homology CDS 4171899 4172372 . + 0 ID=cds-WJG92774.1;Parent=gene-PUW35_20165;Dbxref=NCBI_GP:WJG92774.1;Name=WJG92774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=PUW35_20165;product=hypothetical protein;protein_id=WJG92774.1;transl_table=11 CP118132.1 Genbank gene 4172362 4172763 . + . ID=gene-PUW35_20170;Name=PUW35_20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20170 CP118132.1 Protein Homology CDS 4172362 4172763 . + 0 ID=cds-WJG92775.1;Parent=gene-PUW35_20170;Dbxref=NCBI_GP:WJG92775.1;Name=WJG92775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=PUW35_20170;product=DUF2531 family protein;protein_id=WJG92775.1;transl_table=11 CP118132.1 Genbank pseudogene 4172678 4173914 . + . ID=gene-PUW35_20175;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=PUW35_20175;pseudo=true CP118132.1 Protein Homology CDS 4172678 4173914 . + 0 ID=cds-PUW35_20175;Parent=gene-PUW35_20175;Note=frameshifted;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=PUW35_20175;product=DNA uptake porin HofQ;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4174378 4174899 . + . ID=gene-PUW35_20180;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=PUW35_20180 CP118132.1 Protein Homology CDS 4174378 4174899 . + 0 ID=cds-WJG92776.1;Parent=gene-PUW35_20180;Dbxref=NCBI_GP:WJG92776.1;Name=WJG92776.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=PUW35_20180;product=shikimate kinase AroK;protein_id=WJG92776.1;transl_table=11 CP118132.1 Genbank gene 4174956 4176044 . + . ID=gene-PUW35_20185;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=PUW35_20185 CP118132.1 Protein Homology CDS 4174956 4176044 . + 0 ID=cds-WJG92777.1;Parent=gene-PUW35_20185;Dbxref=NCBI_GP:WJG92777.1;Name=WJG92777.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=PUW35_20185;product=3-dehydroquinate synthase;protein_id=WJG92777.1;transl_table=11 CP118132.1 Genbank gene 4176142 4177419 . + . ID=gene-PUW35_20190;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=PUW35_20190 CP118132.1 Protein Homology CDS 4176142 4177419 . + 0 ID=cds-WJG92778.1;Parent=gene-PUW35_20190;Dbxref=NCBI_GP:WJG92778.1;Name=WJG92778.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=PUW35_20190;product=cell division protein DamX;protein_id=WJG92778.1;transl_table=11 CP118132.1 Genbank pseudogene 4177602 4178435 . + . ID=gene-PUW35_20195;Name=dam;gbkey=Gene;gene=dam;gene_biotype=pseudogene;locus_tag=PUW35_20195;pseudo=true CP118132.1 Protein Homology CDS 4177602 4178435 . + 0 ID=cds-PUW35_20195;Parent=gene-PUW35_20195;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=PUW35_20195;product=adenine-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4178453 4179130 . + . ID=gene-PUW35_20200;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=PUW35_20200 CP118132.1 Protein Homology CDS 4178453 4179130 . + 0 ID=cds-WJG92779.1;Parent=gene-PUW35_20200;Dbxref=NCBI_GP:WJG92779.1;Name=WJG92779.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=PUW35_20200;product=ribulose-phosphate 3-epimerase;protein_id=WJG92779.1;transl_table=11 CP118132.1 Genbank gene 4179123 4179881 . + . ID=gene-PUW35_20205;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=PUW35_20205 CP118132.1 Protein Homology CDS 4179123 4179881 . + 0 ID=cds-WJG92780.1;Parent=gene-PUW35_20205;Dbxref=NCBI_GP:WJG92780.1;Name=WJG92780.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=PUW35_20205;product=phosphoglycolate phosphatase;protein_id=WJG92780.1;transl_table=11 CP118132.1 Genbank gene 4179874 4180878 . + . ID=gene-PUW35_20210;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PUW35_20210 CP118132.1 Protein Homology CDS 4179874 4180878 . + 0 ID=cds-WJG92781.1;Parent=gene-PUW35_20210;Dbxref=NCBI_GP:WJG92781.1;Name=WJG92781.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=PUW35_20210;product=tryptophan--tRNA ligase;protein_id=WJG92781.1;transl_table=11 CP118132.1 Genbank gene 4181021 4181191 . - . ID=gene-PUW35_20215;Name=PUW35_20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20215 CP118132.1 Protein Homology CDS 4181021 4181191 . - 0 ID=cds-WJG92782.1;Parent=gene-PUW35_20215;Dbxref=NCBI_GP:WJG92782.1;Name=WJG92782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=PUW35_20215;product=YhfL family protein;protein_id=WJG92782.1;transl_table=11 CP118132.1 Genbank pseudogene 4181384 4187156 . - . ID=gene-PUW35_20220;Name=bigA;gbkey=Gene;gene=bigA;gene_biotype=pseudogene;locus_tag=PUW35_20220;pseudo=true CP118132.1 Protein Homology CDS 4181384 4187156 . - 0 ID=cds-PUW35_20220;Parent=gene-PUW35_20220;Note=frameshifted;gbkey=CDS;gene=bigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=PUW35_20220;product=autotransporter adhesin BigA;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4187485 4188857 . - . ID=gene-PUW35_20225;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=pseudogene;locus_tag=PUW35_20225;pseudo=true CP118132.1 Protein Homology CDS 4187485 4188857 . - 0 ID=cds-PUW35_20225;Parent=gene-PUW35_20225;Note=frameshifted;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=PUW35_20225;product=siroheme synthase CysG;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4188869 4189678 . - . ID=gene-PUW35_20230;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=PUW35_20230 CP118132.1 Protein Homology CDS 4188869 4189678 . - 0 ID=cds-WJG92783.1;Parent=gene-PUW35_20230;Dbxref=NCBI_GP:WJG92783.1;Name=WJG92783.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442185.1;locus_tag=PUW35_20230;product=nitrite transporter NirC;protein_id=WJG92783.1;transl_table=11 CP118132.1 Genbank gene 4189873 4190199 . - . ID=gene-PUW35_20235;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=PUW35_20235 CP118132.1 Protein Homology CDS 4189873 4190199 . - 0 ID=cds-WJG92784.1;Parent=gene-PUW35_20235;Dbxref=NCBI_GP:WJG92784.1;Name=WJG92784.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=PUW35_20235;product=nitrite reductase small subunit NirD;protein_id=WJG92784.1;transl_table=11 CP118132.1 Genbank gene 4190196 4192739 . - . ID=gene-PUW35_20240;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=PUW35_20240 CP118132.1 Protein Homology CDS 4190196 4192739 . - 0 ID=cds-WJG92785.1;Parent=gene-PUW35_20240;Dbxref=NCBI_GP:WJG92785.1;Name=WJG92785.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=PUW35_20240;product=NADPH-nitrite reductase large subunit;protein_id=WJG92785.1;transl_table=11 CP118132.1 Genbank gene 4193002 4194183 . - . ID=gene-PUW35_20245;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=PUW35_20245 CP118132.1 Protein Homology CDS 4193002 4194183 . - 0 ID=cds-WJG92786.1;Parent=gene-PUW35_20245;Dbxref=NCBI_GP:WJG92786.1;Name=WJG92786.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=PUW35_20245;product=MFS transporter TsgA;protein_id=WJG92786.1;transl_table=11 CP118132.1 Genbank gene 4194460 4195032 . + . ID=gene-PUW35_20250;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=PUW35_20250 CP118132.1 Protein Homology CDS 4194460 4195032 . + 0 ID=cds-WJG92787.1;Parent=gene-PUW35_20250;Dbxref=NCBI_GP:WJG92787.1;Name=WJG92787.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=PUW35_20250;product=peptidylprolyl isomerase A;protein_id=WJG92787.1;transl_table=11 CP118132.1 Genbank gene 4195141 4195308 . + . ID=gene-PUW35_20255;Name=PUW35_20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20255 CP118132.1 Protein Homology CDS 4195141 4195308 . + 0 ID=cds-WJG92788.1;Parent=gene-PUW35_20255;Dbxref=NCBI_GP:WJG92788.1;Name=WJG92788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=PUW35_20255;product=YhfG family protein;protein_id=WJG92788.1;transl_table=11 CP118132.1 Genbank gene 4195298 4195900 . + . ID=gene-PUW35_20260;Name=PUW35_20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20260 CP118132.1 Protein Homology CDS 4195298 4195900 . + 0 ID=cds-WJG92789.1;Parent=gene-PUW35_20260;Dbxref=NCBI_GP:WJG92789.1;Name=WJG92789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=PUW35_20260;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WJG92789.1;transl_table=11 CP118132.1 Genbank gene 4195932 4196495 . + . ID=gene-PUW35_20265;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=PUW35_20265 CP118132.1 Protein Homology CDS 4195932 4196495 . + 0 ID=cds-WJG92790.1;Parent=gene-PUW35_20265;Dbxref=NCBI_GP:WJG92790.1;Name=WJG92790.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=PUW35_20265;product=aminodeoxychorismate synthase component 2;protein_id=WJG92790.1;transl_table=11 CP118132.1 Genbank gene 4196581 4197798 . + . ID=gene-PUW35_20270;Name=PUW35_20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20270 CP118132.1 Protein Homology CDS 4196581 4197798 . + 0 ID=cds-WJG92791.1;Parent=gene-PUW35_20270;Dbxref=NCBI_GP:WJG92791.1;Name=WJG92791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=PUW35_20270;product=aspartate aminotransferase family protein;protein_id=WJG92791.1;transl_table=11 CP118132.1 Genbank gene 4197841 4199928 . - . ID=gene-PUW35_20275;Name=PUW35_20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20275 CP118132.1 Protein Homology CDS 4197841 4199928 . - 0 ID=cds-WJG95158.1;Parent=gene-PUW35_20275;Dbxref=NCBI_GP:WJG95158.1;Name=WJG95158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=PUW35_20275;product=YccS/YhfK family putative transporter;protein_id=WJG95158.1;transl_table=11 CP118132.1 Genbank gene 4199977 4200609 . - . ID=gene-PUW35_20280;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=PUW35_20280 CP118132.1 Protein Homology CDS 4199977 4200609 . - 0 ID=cds-WJG92792.1;Parent=gene-PUW35_20280;Dbxref=NCBI_GP:WJG92792.1;Name=WJG92792.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=PUW35_20280;product=cAMP-activated global transcriptional regulator CRP;protein_id=WJG92792.1;transl_table=11 CP118132.1 Genbank gene 4200917 4201321 . + . ID=gene-PUW35_20285;Name=PUW35_20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20285 CP118132.1 Protein Homology CDS 4200917 4201321 . + 0 ID=cds-WJG92793.1;Parent=gene-PUW35_20285;Dbxref=NCBI_GP:WJG92793.1;Name=WJG92793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=PUW35_20285;product=OsmC family protein;protein_id=WJG92793.1;transl_table=11 CP118132.1 Genbank gene 4201358 4202287 . - . ID=gene-PUW35_20290;Name=PUW35_20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20290 CP118132.1 Protein Homology CDS 4201358 4202287 . - 0 ID=cds-WJG92794.1;Parent=gene-PUW35_20290;Dbxref=NCBI_GP:WJG92794.1;Name=WJG92794.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274691.1;locus_tag=PUW35_20290;product=phosphoribulokinase;protein_id=WJG92794.1;transl_table=11 CP118132.1 Genbank pseudogene 4202338 4202555 . - . ID=gene-PUW35_20295;Name=PUW35_20295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_20295;pseudo=true CP118132.1 Protein Homology CDS 4202338 4202555 . - 0 ID=cds-PUW35_20295;Parent=gene-PUW35_20295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=PUW35_20295;product=YheU family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4202552 4203619 . - . ID=gene-PUW35_20300;Name=PUW35_20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20300 CP118132.1 Protein Homology CDS 4202552 4203619 . - 0 ID=cds-WJG92795.1;Parent=gene-PUW35_20300;Dbxref=NCBI_GP:WJG92795.1;Name=WJG92795.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=PUW35_20300;product=hydrolase;protein_id=WJG92795.1;transl_table=11 CP118132.1 Genbank gene 4203817 4204128 . + . ID=gene-PUW35_20305;Name=PUW35_20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20305 CP118132.1 Protein Homology CDS 4203817 4204128 . + 0 ID=cds-WJG92796.1;Parent=gene-PUW35_20305;Dbxref=NCBI_GP:WJG92796.1;Name=WJG92796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=PUW35_20305;product=monooxygenase;protein_id=WJG92796.1;transl_table=11 CP118132.1 Genbank gene 4204130 4204351 . - . ID=gene-PUW35_20310;Name=PUW35_20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20310 CP118132.1 Protein Homology CDS 4204130 4204351 . - 0 ID=cds-WJG92797.1;Parent=gene-PUW35_20310;Dbxref=NCBI_GP:WJG92797.1;Name=WJG92797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=PUW35_20310;product=LysR family transcriptional regulator;protein_id=WJG92797.1;transl_table=11 CP118132.1 Genbank gene 4204514 4206421 . - . ID=gene-PUW35_20315;Name=PUW35_20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20315 CP118132.1 Protein Homology CDS 4204514 4206421 . - 0 ID=cds-WJG92798.1;Parent=gene-PUW35_20315;Dbxref=NCBI_GP:WJG92798.1;Name=WJG92798.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=PUW35_20315;product=ABC transporter ATP-binding protein;protein_id=WJG92798.1;transl_table=11 CP118132.1 Genbank gene 4206687 4207238 . + . ID=gene-PUW35_20320;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=PUW35_20320 CP118132.1 Protein Homology CDS 4206687 4207238 . + 0 ID=cds-WJG92799.1;Parent=gene-PUW35_20320;Dbxref=NCBI_GP:WJG92799.1;Name=WJG92799.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=PUW35_20320;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WJG92799.1;transl_table=11 CP118132.1 Genbank pseudogene 4207238 4209044 . + . ID=gene-PUW35_20325;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=pseudogene;locus_tag=PUW35_20325;pseudo=true CP118132.1 Protein Homology CDS 4207238 4209044 . + 0 ID=cds-PUW35_20325;Parent=gene-PUW35_20325;Note=frameshifted;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=PUW35_20325;product=glutathione-regulated potassium-efflux system protein KefB;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4209054 4209254 . + . ID=gene-PUW35_20330;Name=PUW35_20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20330 CP118132.1 Protein Homology CDS 4209054 4209254 . + 0 ID=cds-WJG92800.1;Parent=gene-PUW35_20330;Dbxref=NCBI_GP:WJG92800.1;Name=WJG92800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=PUW35_20330;product=YheV family putative zinc ribbon protein;protein_id=WJG92800.1;transl_table=11 CP118132.1 Genbank gene 4209349 4209939 . + . ID=gene-PUW35_20335;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=PUW35_20335 CP118132.1 Protein Homology CDS 4209349 4209939 . + 0 ID=cds-WJG92801.1;Parent=gene-PUW35_20335;Dbxref=NCBI_GP:WJG92801.1;Name=WJG92801.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=PUW35_20335;product=peptidylprolyl isomerase;protein_id=WJG92801.1;transl_table=11 CP118132.1 Genbank gene 4210128 4210346 . - . ID=gene-PUW35_20340;Name=PUW35_20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20340 CP118132.1 Protein Homology CDS 4210128 4210346 . - 0 ID=cds-WJG92802.1;Parent=gene-PUW35_20340;Dbxref=NCBI_GP:WJG92802.1;Name=WJG92802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=PUW35_20340;product=SlyX family protein;protein_id=WJG92802.1;transl_table=11 CP118132.1 Genbank gene 4210566 4211384 . + . ID=gene-PUW35_20345;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=PUW35_20345 CP118132.1 Protein Homology CDS 4210566 4211384 . + 0 ID=cds-WJG92803.1;Parent=gene-PUW35_20345;Dbxref=NCBI_GP:WJG92803.1;Name=WJG92803.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=PUW35_20345;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJG92803.1;transl_table=11 CP118132.1 Genbank gene 4211660 4212382 . + . ID=gene-PUW35_20350;Name=PUW35_20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20350 CP118132.1 Protein Homology CDS 4211660 4212382 . + 0 ID=cds-WJG92804.1;Parent=gene-PUW35_20350;Dbxref=NCBI_GP:WJG92804.1;Name=WJG92804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=PUW35_20350;product=transcriptional regulator;protein_id=WJG92804.1;transl_table=11 CP118132.1 Genbank gene 4212382 4212768 . + . ID=gene-PUW35_20355;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=PUW35_20355 CP118132.1 Protein Homology CDS 4212382 4212768 . + 0 ID=cds-WJG92805.1;Parent=gene-PUW35_20355;Dbxref=NCBI_GP:WJG92805.1;Name=WJG92805.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=PUW35_20355;product=sulfurtransferase complex subunit TusD;protein_id=WJG92805.1;transl_table=11 CP118132.1 Genbank gene 4212768 4213124 . + . ID=gene-PUW35_20360;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=PUW35_20360 CP118132.1 Protein Homology CDS 4212768 4213124 . + 0 ID=cds-WJG92806.1;Parent=gene-PUW35_20360;Dbxref=NCBI_GP:WJG92806.1;Name=WJG92806.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=PUW35_20360;product=sulfurtransferase complex subunit TusC;protein_id=WJG92806.1;transl_table=11 CP118132.1 Genbank gene 4213132 4213419 . + . ID=gene-PUW35_20365;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=PUW35_20365 CP118132.1 Protein Homology CDS 4213132 4213419 . + 0 ID=cds-WJG92807.1;Parent=gene-PUW35_20365;Dbxref=NCBI_GP:WJG92807.1;Name=WJG92807.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=PUW35_20365;product=sulfurtransferase complex subunit TusB;protein_id=WJG92807.1;transl_table=11 CP118132.1 Genbank gene 4213545 4213919 . + . ID=gene-PUW35_20370;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=PUW35_20370 CP118132.1 Protein Homology CDS 4213545 4213919 . + 0 ID=cds-WJG92808.1;Parent=gene-PUW35_20370;Dbxref=NCBI_GP:WJG92808.1;Name=WJG92808.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=PUW35_20370;product=30S ribosomal protein S12;protein_id=WJG92808.1;transl_table=11 CP118132.1 Genbank gene 4214015 4214485 . + . ID=gene-PUW35_20375;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=PUW35_20375 CP118132.1 Protein Homology CDS 4214015 4214485 . + 0 ID=cds-WJG92809.1;Parent=gene-PUW35_20375;Dbxref=NCBI_GP:WJG92809.1;Name=WJG92809.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=PUW35_20375;product=30S ribosomal protein S7;protein_id=WJG92809.1;transl_table=11 CP118132.1 Genbank gene 4214582 4216696 . + . ID=gene-PUW35_20380;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=PUW35_20380 CP118132.1 Protein Homology CDS 4214582 4216696 . + 0 ID=cds-WJG92810.1;Parent=gene-PUW35_20380;Dbxref=NCBI_GP:WJG92810.1;Name=WJG92810.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=PUW35_20380;product=elongation factor G;protein_id=WJG92810.1;transl_table=11 CP118132.1 Genbank gene 4216768 4217952 . + . ID=gene-PUW35_20385;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PUW35_20385 CP118132.1 Protein Homology CDS 4216768 4217952 . + 0 ID=cds-WJG92811.1;Parent=gene-PUW35_20385;Dbxref=NCBI_GP:WJG92811.1;Name=WJG92811.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PUW35_20385;product=elongation factor Tu;protein_id=WJG92811.1;transl_table=11 CP118132.1 Genbank gene 4218137 4218331 . + . ID=gene-PUW35_20390;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=PUW35_20390 CP118132.1 Protein Homology CDS 4218137 4218331 . + 0 ID=cds-WJG92812.1;Parent=gene-PUW35_20390;Dbxref=NCBI_GP:WJG92812.1;Name=WJG92812.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=PUW35_20390;product=bacterioferritin-associated ferredoxin;protein_id=WJG92812.1;transl_table=11 CP118132.1 Genbank gene 4218404 4218880 . + . ID=gene-PUW35_20395;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=PUW35_20395 CP118132.1 Protein Homology CDS 4218404 4218880 . + 0 ID=cds-WJG92813.1;Parent=gene-PUW35_20395;Dbxref=NCBI_GP:WJG92813.1;Name=WJG92813.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=PUW35_20395;product=bacterioferritin;protein_id=WJG92813.1;transl_table=11 CP118132.1 Genbank gene 4218877 4219344 . - . ID=gene-PUW35_20400;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=PUW35_20400 CP118132.1 Protein Homology CDS 4218877 4219344 . - 0 ID=cds-WJG92814.1;Parent=gene-PUW35_20400;Dbxref=NCBI_GP:WJG92814.1;Name=WJG92814.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=PUW35_20400;product=leader peptidase HopD;protein_id=WJG92814.1;transl_table=11 CP118132.1 Genbank gene 4219724 4220035 . + . ID=gene-PUW35_20405;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=PUW35_20405 CP118132.1 Protein Homology CDS 4219724 4220035 . + 0 ID=cds-WJG92815.1;Parent=gene-PUW35_20405;Dbxref=NCBI_GP:WJG92815.1;Name=WJG92815.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=PUW35_20405;product=30S ribosomal protein S10;protein_id=WJG92815.1;transl_table=11 CP118132.1 Genbank gene 4220068 4220697 . + . ID=gene-PUW35_20410;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=PUW35_20410 CP118132.1 Protein Homology CDS 4220068 4220697 . + 0 ID=cds-WJG92816.1;Parent=gene-PUW35_20410;Dbxref=NCBI_GP:WJG92816.1;Name=WJG92816.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=PUW35_20410;product=50S ribosomal protein L3;protein_id=WJG92816.1;transl_table=11 CP118132.1 Genbank gene 4220708 4221313 . + . ID=gene-PUW35_20415;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=PUW35_20415 CP118132.1 Protein Homology CDS 4220708 4221313 . + 0 ID=cds-WJG92817.1;Parent=gene-PUW35_20415;Dbxref=NCBI_GP:WJG92817.1;Name=WJG92817.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=PUW35_20415;product=50S ribosomal protein L4;protein_id=WJG92817.1;transl_table=11 CP118132.1 Genbank gene 4221310 4221612 . + . ID=gene-PUW35_20420;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=PUW35_20420 CP118132.1 Protein Homology CDS 4221310 4221612 . + 0 ID=cds-WJG92818.1;Parent=gene-PUW35_20420;Dbxref=NCBI_GP:WJG92818.1;Name=WJG92818.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=PUW35_20420;product=50S ribosomal protein L23;protein_id=WJG92818.1;transl_table=11 CP118132.1 Genbank gene 4221630 4222451 . + . ID=gene-PUW35_20425;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=PUW35_20425 CP118132.1 Protein Homology CDS 4221630 4222451 . + 0 ID=cds-WJG92819.1;Parent=gene-PUW35_20425;Dbxref=NCBI_GP:WJG92819.1;Name=WJG92819.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=PUW35_20425;product=50S ribosomal protein L2;protein_id=WJG92819.1;transl_table=11 CP118132.1 Genbank gene 4222468 4222746 . + . ID=gene-PUW35_20430;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=PUW35_20430 CP118132.1 Protein Homology CDS 4222468 4222746 . + 0 ID=cds-WJG92820.1;Parent=gene-PUW35_20430;Dbxref=NCBI_GP:WJG92820.1;Name=WJG92820.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=PUW35_20430;product=30S ribosomal protein S19;protein_id=WJG92820.1;transl_table=11 CP118132.1 Genbank pseudogene 4222761 4223091 . + . ID=gene-PUW35_20435;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=pseudogene;locus_tag=PUW35_20435;pseudo=true CP118132.1 Protein Homology CDS 4222761 4223091 . + 0 ID=cds-PUW35_20435;Parent=gene-PUW35_20435;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=PUW35_20435;product=50S ribosomal protein L22;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4223109 4223810 . + . ID=gene-PUW35_20440;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=PUW35_20440 CP118132.1 Protein Homology CDS 4223109 4223810 . + 0 ID=cds-WJG92821.1;Parent=gene-PUW35_20440;Dbxref=NCBI_GP:WJG92821.1;Name=WJG92821.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=PUW35_20440;product=30S ribosomal protein S3;protein_id=WJG92821.1;transl_table=11 CP118132.1 Genbank gene 4223823 4224233 . + . ID=gene-PUW35_20445;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=PUW35_20445 CP118132.1 Protein Homology CDS 4223823 4224233 . + 0 ID=cds-WJG92822.1;Parent=gene-PUW35_20445;Dbxref=NCBI_GP:WJG92822.1;Name=WJG92822.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=PUW35_20445;product=50S ribosomal protein L16;protein_id=WJG92822.1;transl_table=11 CP118132.1 Genbank gene 4224233 4224424 . + . ID=gene-PUW35_20450;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=PUW35_20450 CP118132.1 Protein Homology CDS 4224233 4224424 . + 0 ID=cds-WJG92823.1;Parent=gene-PUW35_20450;Dbxref=NCBI_GP:WJG92823.1;Name=WJG92823.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=PUW35_20450;product=50S ribosomal protein L29;protein_id=WJG92823.1;transl_table=11 CP118132.1 Genbank gene 4224424 4224678 . + . ID=gene-PUW35_20455;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=PUW35_20455 CP118132.1 Protein Homology CDS 4224424 4224678 . + 0 ID=cds-WJG92824.1;Parent=gene-PUW35_20455;Dbxref=NCBI_GP:WJG92824.1;Name=WJG92824.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=PUW35_20455;product=30S ribosomal protein S17;protein_id=WJG92824.1;transl_table=11 CP118132.1 Genbank gene 4224842 4225213 . + . ID=gene-PUW35_20460;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=PUW35_20460 CP118132.1 Protein Homology CDS 4224842 4225213 . + 0 ID=cds-WJG92825.1;Parent=gene-PUW35_20460;Dbxref=NCBI_GP:WJG92825.1;Name=WJG92825.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=PUW35_20460;product=50S ribosomal protein L14;protein_id=WJG92825.1;transl_table=11 CP118132.1 Genbank gene 4225224 4225538 . + . ID=gene-PUW35_20465;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=PUW35_20465 CP118132.1 Protein Homology CDS 4225224 4225538 . + 0 ID=cds-WJG92826.1;Parent=gene-PUW35_20465;Dbxref=NCBI_GP:WJG92826.1;Name=WJG92826.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=PUW35_20465;product=50S ribosomal protein L24;protein_id=WJG92826.1;transl_table=11 CP118132.1 Genbank gene 4225553 4226092 . + . ID=gene-PUW35_20470;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=PUW35_20470 CP118132.1 Protein Homology CDS 4225553 4226092 . + 0 ID=cds-WJG92827.1;Parent=gene-PUW35_20470;Dbxref=NCBI_GP:WJG92827.1;Name=WJG92827.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=PUW35_20470;product=50S ribosomal protein L5;protein_id=WJG92827.1;transl_table=11 CP118132.1 Genbank gene 4226107 4226412 . + . ID=gene-PUW35_20475;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=PUW35_20475 CP118132.1 Protein Homology CDS 4226107 4226412 . + 0 ID=cds-WJG92828.1;Parent=gene-PUW35_20475;Dbxref=NCBI_GP:WJG92828.1;Name=WJG92828.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=PUW35_20475;product=30S ribosomal protein S14;protein_id=WJG92828.1;transl_table=11 CP118132.1 Genbank gene 4226446 4226838 . + . ID=gene-PUW35_20480;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=PUW35_20480 CP118132.1 Protein Homology CDS 4226446 4226838 . + 0 ID=cds-WJG92829.1;Parent=gene-PUW35_20480;Dbxref=NCBI_GP:WJG92829.1;Name=WJG92829.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=PUW35_20480;product=30S ribosomal protein S8;protein_id=WJG92829.1;transl_table=11 CP118132.1 Genbank gene 4226851 4227384 . + . ID=gene-PUW35_20485;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=PUW35_20485 CP118132.1 Protein Homology CDS 4226851 4227384 . + 0 ID=cds-WJG92830.1;Parent=gene-PUW35_20485;Dbxref=NCBI_GP:WJG92830.1;Name=WJG92830.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=PUW35_20485;product=50S ribosomal protein L6;protein_id=WJG92830.1;transl_table=11 CP118132.1 Genbank gene 4227394 4227747 . + . ID=gene-PUW35_20490;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=PUW35_20490 CP118132.1 Protein Homology CDS 4227394 4227747 . + 0 ID=cds-WJG92831.1;Parent=gene-PUW35_20490;Dbxref=NCBI_GP:WJG92831.1;Name=WJG92831.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=PUW35_20490;product=50S ribosomal protein L18;protein_id=WJG92831.1;transl_table=11 CP118132.1 Genbank gene 4227762 4228265 . + . ID=gene-PUW35_20495;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=PUW35_20495 CP118132.1 Protein Homology CDS 4227762 4228265 . + 0 ID=cds-WJG92832.1;Parent=gene-PUW35_20495;Dbxref=NCBI_GP:WJG92832.1;Name=WJG92832.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=PUW35_20495;product=30S ribosomal protein S5;protein_id=WJG92832.1;transl_table=11 CP118132.1 Genbank gene 4228269 4228448 . + . ID=gene-PUW35_20500;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=PUW35_20500 CP118132.1 Protein Homology CDS 4228269 4228448 . + 0 ID=cds-WJG92833.1;Parent=gene-PUW35_20500;Dbxref=NCBI_GP:WJG92833.1;Name=WJG92833.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=PUW35_20500;product=50S ribosomal protein L30;protein_id=WJG92833.1;transl_table=11 CP118132.1 Genbank gene 4228452 4228886 . + . ID=gene-PUW35_20505;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=PUW35_20505 CP118132.1 Protein Homology CDS 4228452 4228886 . + 0 ID=cds-WJG92834.1;Parent=gene-PUW35_20505;Dbxref=NCBI_GP:WJG92834.1;Name=WJG92834.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=PUW35_20505;product=50S ribosomal protein L15;protein_id=WJG92834.1;transl_table=11 CP118132.1 Genbank gene 4228894 4230225 . + . ID=gene-PUW35_20510;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=PUW35_20510 CP118132.1 Protein Homology CDS 4228894 4230225 . + 0 ID=cds-WJG92835.1;Parent=gene-PUW35_20510;Dbxref=NCBI_GP:WJG92835.1;Name=WJG92835.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=PUW35_20510;product=preprotein translocase subunit SecY;protein_id=WJG92835.1;transl_table=11 CP118132.1 Genbank gene 4230257 4230373 . + . ID=gene-PUW35_20515;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=PUW35_20515 CP118132.1 Protein Homology CDS 4230257 4230373 . + 0 ID=cds-WJG92836.1;Parent=gene-PUW35_20515;Dbxref=NCBI_GP:WJG92836.1;Name=WJG92836.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=PUW35_20515;product=50S ribosomal protein L36;protein_id=WJG92836.1;transl_table=11 CP118132.1 Genbank gene 4230520 4230876 . + . ID=gene-PUW35_20520;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=PUW35_20520 CP118132.1 Protein Homology CDS 4230520 4230876 . + 0 ID=cds-WJG92837.1;Parent=gene-PUW35_20520;Dbxref=NCBI_GP:WJG92837.1;Name=WJG92837.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=PUW35_20520;product=30S ribosomal protein S13;protein_id=WJG92837.1;transl_table=11 CP118132.1 Genbank gene 4230893 4231282 . + . ID=gene-PUW35_20525;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=PUW35_20525 CP118132.1 Protein Homology CDS 4230893 4231282 . + 0 ID=cds-WJG92838.1;Parent=gene-PUW35_20525;Dbxref=NCBI_GP:WJG92838.1;Name=WJG92838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=PUW35_20525;product=30S ribosomal protein S11;protein_id=WJG92838.1;transl_table=11 CP118132.1 Genbank gene 4231316 4231936 . + . ID=gene-PUW35_20530;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=PUW35_20530 CP118132.1 Protein Homology CDS 4231316 4231936 . + 0 ID=cds-WJG92839.1;Parent=gene-PUW35_20530;Dbxref=NCBI_GP:WJG92839.1;Name=WJG92839.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=PUW35_20530;product=30S ribosomal protein S4;protein_id=WJG92839.1;transl_table=11 CP118132.1 Genbank gene 4231962 4232951 . + . ID=gene-PUW35_20535;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=PUW35_20535 CP118132.1 Protein Homology CDS 4231962 4232951 . + 0 ID=cds-WJG92840.1;Parent=gene-PUW35_20535;Dbxref=NCBI_GP:WJG92840.1;Name=WJG92840.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=PUW35_20535;product=DNA-directed RNA polymerase subunit alpha;protein_id=WJG92840.1;transl_table=11 CP118132.1 Genbank gene 4232992 4233375 . + . ID=gene-PUW35_20540;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=PUW35_20540 CP118132.1 Protein Homology CDS 4232992 4233375 . + 0 ID=cds-WJG92841.1;Parent=gene-PUW35_20540;Dbxref=NCBI_GP:WJG92841.1;Name=WJG92841.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=PUW35_20540;product=50S ribosomal protein L17;protein_id=WJG92841.1;transl_table=11 CP118132.1 Genbank gene 4233480 4233848 . + . ID=gene-PUW35_20545;Name=PUW35_20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20545 CP118132.1 Protein Homology CDS 4233480 4233848 . + 0 ID=cds-WJG92842.1;Parent=gene-PUW35_20545;Dbxref=NCBI_GP:WJG92842.1;Name=WJG92842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=PUW35_20545;product=DUF1992 domain-containing protein;protein_id=WJG92842.1;transl_table=11 CP118132.1 Genbank gene 4233859 4234284 . + . ID=gene-PUW35_20550;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=PUW35_20550 CP118132.1 Protein Homology CDS 4233859 4234284 . + 0 ID=cds-WJG92843.1;Parent=gene-PUW35_20550;Dbxref=NCBI_GP:WJG92843.1;Name=WJG92843.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=PUW35_20550;product=Zn(2+)-responsive transcriptional regulator;protein_id=WJG92843.1;transl_table=11 CP118132.1 Genbank gene 4234342 4234611 . + . ID=gene-PUW35_20555;Name=PUW35_20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20555 CP118132.1 Protein Homology CDS 4234342 4234611 . + 0 ID=cds-WJG92844.1;Parent=gene-PUW35_20555;Dbxref=NCBI_GP:WJG92844.1;Name=WJG92844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092708.1;locus_tag=PUW35_20555;product=alternative ribosome-rescue factor A;protein_id=WJG92844.1;transl_table=11 CP118132.1 Genbank gene 4234547 4234960 . - . ID=gene-PUW35_20560;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=PUW35_20560 CP118132.1 Protein Homology CDS 4234547 4234960 . - 0 ID=cds-WJG92845.1;Parent=gene-PUW35_20560;Dbxref=NCBI_GP:WJG92845.1;Name=WJG92845.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=PUW35_20560;product=large-conductance mechanosensitive channel protein MscL;protein_id=WJG92845.1;transl_table=11 CP118132.1 Genbank gene 4235102 4236478 . - . ID=gene-PUW35_20565;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=PUW35_20565 CP118132.1 Protein Homology CDS 4235102 4236478 . - 0 ID=cds-WJG92846.1;Parent=gene-PUW35_20565;Dbxref=NCBI_GP:WJG92846.1;Name=WJG92846.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=PUW35_20565;product=Trk system potassium transporter TrkA;protein_id=WJG92846.1;transl_table=11 CP118132.1 Genbank gene 4236500 4237789 . - . ID=gene-PUW35_20570;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=PUW35_20570 CP118132.1 Protein Homology CDS 4236500 4237789 . - 0 ID=cds-WJG92847.1;Parent=gene-PUW35_20570;Dbxref=NCBI_GP:WJG92847.1;Name=WJG92847.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=PUW35_20570;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WJG92847.1;transl_table=11 CP118132.1 Genbank gene 4237841 4238788 . - . ID=gene-PUW35_20575;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=PUW35_20575 CP118132.1 Protein Homology CDS 4237841 4238788 . - 0 ID=cds-WJG92848.1;Parent=gene-PUW35_20575;Dbxref=NCBI_GP:WJG92848.1;Name=WJG92848.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=PUW35_20575;product=methionyl-tRNA formyltransferase;protein_id=WJG92848.1;transl_table=11 CP118132.1 Genbank gene 4238804 4239313 . - . ID=gene-PUW35_20580;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=PUW35_20580 CP118132.1 Protein Homology CDS 4238804 4239313 . - 0 ID=cds-WJG92849.1;Parent=gene-PUW35_20580;Dbxref=NCBI_GP:WJG92849.1;Name=WJG92849.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=PUW35_20580;product=peptide deformylase;protein_id=WJG92849.1;transl_table=11 CP118132.1 Genbank pseudogene 4239445 4240568 . + . ID=gene-PUW35_20585;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=pseudogene;locus_tag=PUW35_20585;pseudo=true CP118132.1 Protein Homology CDS 4239445 4240568 . + 0 ID=cds-PUW35_20585;Parent=gene-PUW35_20585;Note=frameshifted;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=PUW35_20585;product=DNA-protecting protein DprA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4240540 4241013 . + . ID=gene-PUW35_20590;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=PUW35_20590 CP118132.1 Protein Homology CDS 4240540 4241013 . + 0 ID=cds-WJG92850.1;Parent=gene-PUW35_20590;Dbxref=NCBI_GP:WJG92850.1;Name=WJG92850.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=PUW35_20590;product=DUF494 family protein Smg;protein_id=WJG92850.1;transl_table=11 CP118132.1 Genbank gene 4241040 4241582 . + . ID=gene-PUW35_20595;Name=PUW35_20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20595 CP118132.1 Protein Homology CDS 4241040 4241582 . + 0 ID=cds-WJG92851.1;Parent=gene-PUW35_20595;Dbxref=NCBI_GP:WJG92851.1;Name=WJG92851.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=PUW35_20595;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WJG92851.1;transl_table=11 CP118132.1 Genbank gene 4241587 4242159 . + . ID=gene-PUW35_20600;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=PUW35_20600 CP118132.1 Protein Homology CDS 4241587 4242159 . + 0 ID=cds-WJG92852.1;Parent=gene-PUW35_20600;Dbxref=NCBI_GP:WJG92852.1;Name=WJG92852.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=PUW35_20600;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WJG92852.1;transl_table=11 CP118132.1 Genbank gene 4242164 4242982 . + . ID=gene-PUW35_20605;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=PUW35_20605 CP118132.1 Protein Homology CDS 4242164 4242982 . + 0 ID=cds-WJG95159.1;Parent=gene-PUW35_20605;Dbxref=NCBI_GP:WJG95159.1;Name=WJG95159.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=PUW35_20605;product=shikimate dehydrogenase;protein_id=WJG95159.1;transl_table=11 CP118132.1 Genbank gene 4242979 4243236 . + . ID=gene-PUW35_20610;Name=PUW35_20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20610 CP118132.1 Protein Homology CDS 4242979 4243236 . + 0 ID=cds-WJG92853.1;Parent=gene-PUW35_20610;Dbxref=NCBI_GP:WJG92853.1;Name=WJG92853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=PUW35_20610;product=DUF1488 domain-containing protein;protein_id=WJG92853.1;transl_table=11 CP118132.1 Genbank gene 4243212 4243766 . - . ID=gene-PUW35_20615;Name=PUW35_20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20615 CP118132.1 Protein Homology CDS 4243212 4243766 . - 0 ID=cds-WJG92854.1;Parent=gene-PUW35_20615;Dbxref=NCBI_GP:WJG92854.1;Name=WJG92854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=PUW35_20615;product=gamma carbonic anhydrase family protein;protein_id=WJG92854.1;transl_table=11 CP118132.1 Genbank gene 4243783 4244031 . + . ID=gene-PUW35_20620;Name=PUW35_20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20620 CP118132.1 GeneMarkS-2+ CDS 4243783 4244031 . + 0 ID=cds-WJG92855.1;Parent=gene-PUW35_20620;Dbxref=NCBI_GP:WJG92855.1;Name=WJG92855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_20620;product=hypothetical protein;protein_id=WJG92855.1;transl_table=11 CP118132.1 Genbank gene 4244237 4245778 . + . ID=gene-PUW35_20625;Name=PUW35_20625;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_20625 CP118132.1 cmsearch rRNA 4244237 4245778 . + . ID=rna-PUW35_20625;Parent=gene-PUW35_20625;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_20625;product=16S ribosomal RNA CP118132.1 cmsearch exon 4244237 4245778 . + . ID=exon-PUW35_20625-1;Parent=rna-PUW35_20625;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_20625;product=16S ribosomal RNA CP118132.1 Genbank gene 4245864 4245938 . + . ID=gene-PUW35_20630;Name=PUW35_20630;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_20630 CP118132.1 tRNAscan-SE tRNA 4245864 4245938 . + . ID=rna-PUW35_20630;Parent=gene-PUW35_20630;anticodon=(pos:4245898..4245900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_20630;product=tRNA-Glu CP118132.1 tRNAscan-SE exon 4245864 4245938 . + . ID=exon-PUW35_20630-1;Parent=rna-PUW35_20630;anticodon=(pos:4245898..4245900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_20630;product=tRNA-Glu CP118132.1 Genbank gene 4246132 4249119 . + . ID=gene-PUW35_20635;Name=PUW35_20635;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW35_20635 CP118132.1 cmsearch rRNA 4246132 4249119 . + . ID=rna-PUW35_20635;Parent=gene-PUW35_20635;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_20635;product=23S ribosomal RNA CP118132.1 cmsearch exon 4246132 4249119 . + . ID=exon-PUW35_20635-1;Parent=rna-PUW35_20635;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_20635;product=23S ribosomal RNA CP118132.1 Genbank gene 4249316 4249431 . + . ID=gene-PUW35_20640;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW35_20640 CP118132.1 cmsearch rRNA 4249316 4249431 . + . ID=rna-PUW35_20640;Parent=gene-PUW35_20640;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_20640;product=5S ribosomal RNA CP118132.1 cmsearch exon 4249316 4249431 . + . ID=exon-PUW35_20640-1;Parent=rna-PUW35_20640;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW35_20640;product=5S ribosomal RNA CP118132.1 Genbank gene 4249597 4250034 . - . ID=gene-PUW35_20645;Name=PUW35_20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20645 CP118132.1 Protein Homology CDS 4249597 4250034 . - 0 ID=cds-WJG92856.1;Parent=gene-PUW35_20645;Dbxref=NCBI_GP:WJG92856.1;Name=WJG92856.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=PUW35_20645;product=acetyltransferase;protein_id=WJG92856.1;transl_table=11 CP118132.1 Genbank gene 4250191 4251120 . + . ID=gene-PUW35_20650;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=PUW35_20650 CP118132.1 Protein Homology CDS 4250191 4251120 . + 0 ID=cds-WJG92857.1;Parent=gene-PUW35_20650;Dbxref=NCBI_GP:WJG92857.1;Name=WJG92857.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=PUW35_20650;product=homoserine O-succinyltransferase;protein_id=WJG92857.1;transl_table=11 CP118132.1 Genbank gene 4251389 4252990 . + . ID=gene-PUW35_20655;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=PUW35_20655 CP118132.1 Protein Homology CDS 4251389 4252990 . + 0 ID=cds-WJG95160.1;Parent=gene-PUW35_20655;Dbxref=NCBI_GP:WJG95160.1;Name=WJG95160.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=PUW35_20655;product=malate synthase A;protein_id=WJG95160.1;transl_table=11 CP118132.1 Genbank gene 4253022 4254326 . + . ID=gene-PUW35_20660;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=PUW35_20660 CP118132.1 Protein Homology CDS 4253022 4254326 . + 0 ID=cds-WJG92858.1;Parent=gene-PUW35_20660;Dbxref=NCBI_GP:WJG92858.1;Name=WJG92858.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=PUW35_20660;product=isocitrate lyase;protein_id=WJG92858.1;transl_table=11 CP118132.1 Genbank gene 4254428 4256179 . + . ID=gene-PUW35_20665;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=PUW35_20665 CP118132.1 Protein Homology CDS 4254428 4256179 . + 0 ID=cds-WJG92859.1;Parent=gene-PUW35_20665;Dbxref=NCBI_GP:WJG92859.1;Name=WJG92859.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=PUW35_20665;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WJG92859.1;transl_table=11 CP118132.1 Genbank gene 4256143 4256550 . - . ID=gene-PUW35_20670;Name=PUW35_20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20670 CP118132.1 Protein Homology CDS 4256143 4256550 . - 0 ID=cds-WJG95161.1;Parent=gene-PUW35_20670;Dbxref=NCBI_GP:WJG95161.1;Name=WJG95161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=PUW35_20670;product=ASCH domain-containing protein;protein_id=WJG95161.1;transl_table=11 CP118132.1 Genbank gene 4256561 4257385 . - . ID=gene-PUW35_20675;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=PUW35_20675 CP118132.1 Protein Homology CDS 4256561 4257385 . - 0 ID=cds-WJG92860.1;Parent=gene-PUW35_20675;Dbxref=NCBI_GP:WJG92860.1;Name=WJG92860.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=PUW35_20675;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WJG92860.1;transl_table=11 CP118132.1 Genbank pseudogene 4257602 4261371 . + . ID=gene-PUW35_20680;Name=metH;gbkey=Gene;gene=metH;gene_biotype=pseudogene;locus_tag=PUW35_20680;pseudo=true CP118132.1 Protein Homology CDS 4257602 4261371 . + 0 ID=cds-PUW35_20680;Parent=gene-PUW35_20680;Note=frameshifted;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: protein motif:HMM:NF014961.2;locus_tag=PUW35_20680;product=methionine synthase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4261638 4263269 . + . ID=gene-PUW35_20685;Name=PUW35_20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20685 CP118132.1 Protein Homology CDS 4261638 4263269 . + 0 ID=cds-WJG92861.1;Parent=gene-PUW35_20685;Dbxref=NCBI_GP:WJG92861.1;Name=WJG92861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=PUW35_20685;product=Na/Pi cotransporter family protein;protein_id=WJG92861.1;transl_table=11 CP118132.1 Genbank gene 4263329 4264033 . - . ID=gene-PUW35_20690;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=PUW35_20690 CP118132.1 Protein Homology CDS 4263329 4264033 . - 0 ID=cds-WJG92862.1;Parent=gene-PUW35_20690;Dbxref=NCBI_GP:WJG92862.1;Name=WJG92862.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421779.1;locus_tag=PUW35_20690;product=dipeptidase PepE;protein_id=WJG92862.1;transl_table=11 CP118132.1 Genbank gene 4264105 4264206 . + . ID=gene-PUW35_20695;Name=PUW35_20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20695 CP118132.1 Protein Homology CDS 4264105 4264206 . + 0 ID=cds-WJG92863.1;Parent=gene-PUW35_20695;Dbxref=NCBI_GP:WJG92863.1;Name=WJG92863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=PUW35_20695;product=hypothetical protein;protein_id=WJG92863.1;transl_table=11 CP118132.1 Genbank gene 4264241 4264780 . + . ID=gene-PUW35_20700;Name=PUW35_20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20700 CP118132.1 Protein Homology CDS 4264241 4264780 . + 0 ID=cds-WJG92864.1;Parent=gene-PUW35_20700;Dbxref=NCBI_GP:WJG92864.1;Name=WJG92864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=PUW35_20700;product=DUF2058 domain-containing protein;protein_id=WJG92864.1;transl_table=11 CP118132.1 Genbank gene 4264827 4265696 . + . ID=gene-PUW35_20705;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=PUW35_20705 CP118132.1 Protein Homology CDS 4264827 4265696 . + 0 ID=cds-WJG92865.1;Parent=gene-PUW35_20705;Dbxref=NCBI_GP:WJG92865.1;Name=WJG92865.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=PUW35_20705;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WJG92865.1;transl_table=11 CP118132.1 Genbank gene 4265693 4265965 . - . ID=gene-PUW35_20710;Name=PUW35_20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20710 CP118132.1 Protein Homology CDS 4265693 4265965 . - 0 ID=cds-WJG92866.1;Parent=gene-PUW35_20710;Dbxref=NCBI_GP:WJG92866.1;Name=WJG92866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=PUW35_20710;product=DUF3811 domain-containing protein;protein_id=WJG92866.1;transl_table=11 CP118132.1 Genbank pseudogene 4266028 4266785 . - . ID=gene-PUW35_20715;Name=PUW35_20715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_20715;pseudo=true CP118132.1 Protein Homology CDS 4266028 4266785 . - 0 ID=cds-PUW35_20715;Parent=gene-PUW35_20715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=PUW35_20715;product=DeoR/GlpR family DNA-binding transcription regulator;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4266772 4267635 . - . ID=gene-PUW35_20720;Name=PUW35_20720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_20720;pseudo=true CP118132.1 Protein Homology CDS 4266772 4267635 . - 0 ID=cds-PUW35_20720;Parent=gene-PUW35_20720;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=PUW35_20720;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4267652 4268491 . - . ID=gene-PUW35_20725;Name=PUW35_20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20725 CP118132.1 Protein Homology CDS 4267652 4268491 . - 0 ID=cds-WJG92867.1;Parent=gene-PUW35_20725;Dbxref=NCBI_GP:WJG92867.1;Name=WJG92867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=PUW35_20725;product=histidine biosynthesis protein;protein_id=WJG92867.1;transl_table=11 CP118132.1 Genbank pseudogene 4268515 4269971 . - . ID=gene-PUW35_20730;Name=PUW35_20730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_20730;pseudo=true CP118132.1 Protein Homology CDS 4268515 4269971 . - 0 ID=cds-PUW35_20730;Parent=gene-PUW35_20730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=PUW35_20730;product=PTS sugar transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4270400 4271128 . - . ID=gene-PUW35_20735;Name=PUW35_20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20735 CP118132.1 Protein Homology CDS 4270400 4271128 . - 0 ID=cds-WJG92868.1;Parent=gene-PUW35_20735;Dbxref=NCBI_GP:WJG92868.1;Name=WJG92868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=PUW35_20735;product=hypothetical protein;protein_id=WJG92868.1;transl_table=11 CP118132.1 Genbank gene 4271739 4271993 . - . ID=gene-PUW35_20740;Name=PUW35_20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20740 CP118132.1 Protein Homology CDS 4271739 4271993 . - 0 ID=cds-WJG95162.1;Parent=gene-PUW35_20740;Dbxref=NCBI_GP:WJG95162.1;Name=WJG95162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.2;locus_tag=PUW35_20740;product=DapH/DapD/GlmU-related protein;protein_id=WJG95162.1;transl_table=11 CP118132.1 Genbank pseudogene 4272024 4272249 . - . ID=gene-PUW35_20745;Name=PUW35_20745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_20745;pseudo=true CP118132.1 Protein Homology CDS 4272024 4272249 . - 0 ID=cds-PUW35_20745;Parent=gene-PUW35_20745;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=PUW35_20745;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4272572 4272919 . + . ID=gene-PUW35_20750;Name=PUW35_20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20750 CP118132.1 Protein Homology CDS 4272572 4272919 . + 0 ID=cds-WJG92869.1;Parent=gene-PUW35_20750;Dbxref=NCBI_GP:WJG92869.1;Name=WJG92869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=PUW35_20750;product=Mor transcription activator family protein;protein_id=WJG92869.1;transl_table=11 CP118132.1 Genbank gene 4273050 4274399 . - . ID=gene-PUW35_20755;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=PUW35_20755 CP118132.1 Protein Homology CDS 4273050 4274399 . - 0 ID=cds-WJG92870.1;Parent=gene-PUW35_20755;Dbxref=NCBI_GP:WJG92870.1;Name=WJG92870.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=PUW35_20755;product=lysine-sensitive aspartokinase 3;protein_id=WJG92870.1;transl_table=11 CP118132.1 Genbank gene 4274787 4276436 . + . ID=gene-PUW35_20760;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=PUW35_20760 CP118132.1 Protein Homology CDS 4274787 4276436 . + 0 ID=cds-WJG92871.1;Parent=gene-PUW35_20760;Dbxref=NCBI_GP:WJG92871.1;Name=WJG92871.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=PUW35_20760;product=glucose-6-phosphate isomerase;protein_id=WJG92871.1;transl_table=11 CP118132.1 Genbank gene 4276879 4277121 . + . ID=gene-PUW35_20765;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=PUW35_20765 CP118132.1 Protein Homology CDS 4276879 4277121 . + 0 ID=cds-WJG95163.1;Parent=gene-PUW35_20765;Dbxref=NCBI_GP:WJG95163.1;Name=WJG95163.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=PUW35_20765;product=exopolysaccharide production protein YjbE;protein_id=WJG95163.1;transl_table=11 CP118132.1 Genbank gene 4277185 4277823 . + . ID=gene-PUW35_20770;Name=PUW35_20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20770 CP118132.1 Protein Homology CDS 4277185 4277823 . + 0 ID=cds-WJG92872.1;Parent=gene-PUW35_20770;Dbxref=NCBI_GP:WJG92872.1;Name=WJG92872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=PUW35_20770;product=YjbF family lipoprotein;protein_id=WJG92872.1;transl_table=11 CP118132.1 Genbank gene 4277820 4278557 . + . ID=gene-PUW35_20775;Name=PUW35_20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20775 CP118132.1 Protein Homology CDS 4277820 4278557 . + 0 ID=cds-WJG92873.1;Parent=gene-PUW35_20775;Dbxref=NCBI_GP:WJG92873.1;Name=WJG92873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=PUW35_20775;product=capsule biosynthesis GfcC family protein;protein_id=WJG92873.1;transl_table=11 CP118132.1 Genbank gene 4278557 4280653 . + . ID=gene-PUW35_20780;Name=PUW35_20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20780 CP118132.1 Protein Homology CDS 4278557 4280653 . + 0 ID=cds-WJG92874.1;Parent=gene-PUW35_20780;Dbxref=NCBI_GP:WJG92874.1;Name=WJG92874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=PUW35_20780;product=YjbH domain-containing protein;protein_id=WJG92874.1;transl_table=11 CP118132.1 Genbank gene 4280796 4281206 . + . ID=gene-PUW35_20785;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=PUW35_20785 CP118132.1 Protein Homology CDS 4280796 4281206 . + 0 ID=cds-WJG92875.1;Parent=gene-PUW35_20785;Dbxref=NCBI_GP:WJG92875.1;Name=WJG92875.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=PUW35_20785;product=phosphate-starvation-inducible protein PsiE;protein_id=WJG92875.1;transl_table=11 CP118132.1 Genbank gene 4281372 4282262 . - . ID=gene-PUW35_20790;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=PUW35_20790 CP118132.1 Protein Homology CDS 4281372 4282262 . - 0 ID=cds-WJG92876.1;Parent=gene-PUW35_20790;Dbxref=NCBI_GP:WJG92876.1;Name=WJG92876.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=PUW35_20790;product=maltose ABC transporter permease MalG;protein_id=WJG92876.1;transl_table=11 CP118132.1 Genbank gene 4282277 4283821 . - . ID=gene-PUW35_20795;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=PUW35_20795 CP118132.1 Protein Homology CDS 4282277 4283821 . - 0 ID=cds-WJG92877.1;Parent=gene-PUW35_20795;Dbxref=NCBI_GP:WJG92877.1;Name=WJG92877.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=PUW35_20795;product=maltose ABC transporter permease MalF;protein_id=WJG92877.1;transl_table=11 CP118132.1 Genbank gene 4283953 4285143 . - . ID=gene-PUW35_20800;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=PUW35_20800 CP118132.1 Protein Homology CDS 4283953 4285143 . - 0 ID=cds-WJG92878.1;Parent=gene-PUW35_20800;Dbxref=NCBI_GP:WJG92878.1;Name=WJG92878.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=PUW35_20800;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WJG92878.1;transl_table=11 CP118132.1 Genbank gene 4285504 4286613 . + . ID=gene-PUW35_20805;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=PUW35_20805 CP118132.1 Protein Homology CDS 4285504 4286613 . + 0 ID=cds-WJG92879.1;Parent=gene-PUW35_20805;Dbxref=NCBI_GP:WJG92879.1;Name=WJG92879.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=PUW35_20805;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WJG92879.1;transl_table=11 CP118132.1 Genbank gene 4286702 4288060 . + . ID=gene-PUW35_20810;Name=PUW35_20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20810 CP118132.1 Protein Homology CDS 4286702 4288060 . + 0 ID=cds-WJG92880.1;Parent=gene-PUW35_20810;Dbxref=NCBI_GP:WJG92880.1;Name=WJG92880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=PUW35_20810;product=maltoporin;protein_id=WJG92880.1;transl_table=11 CP118132.1 Genbank gene 4288224 4289141 . + . ID=gene-PUW35_20815;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=PUW35_20815 CP118132.1 Protein Homology CDS 4288224 4289141 . + 0 ID=cds-WJG92881.1;Parent=gene-PUW35_20815;Dbxref=NCBI_GP:WJG92881.1;Name=WJG92881.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=PUW35_20815;product=maltose operon protein MalM;protein_id=WJG92881.1;transl_table=11 CP118132.1 Genbank gene 4289322 4289819 . + . ID=gene-PUW35_20820;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=PUW35_20820 CP118132.1 Protein Homology CDS 4289322 4289819 . + 0 ID=cds-WJG92882.1;Parent=gene-PUW35_20820;Dbxref=NCBI_GP:WJG92882.1;Name=WJG92882.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=PUW35_20820;product=chorismate lyase;protein_id=WJG92882.1;transl_table=11 CP118132.1 Genbank gene 4289833 4290705 . + . ID=gene-PUW35_20825;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=PUW35_20825 CP118132.1 Protein Homology CDS 4289833 4290705 . + 0 ID=cds-WJG92883.1;Parent=gene-PUW35_20825;Dbxref=NCBI_GP:WJG92883.1;Name=WJG92883.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=PUW35_20825;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WJG92883.1;transl_table=11 CP118132.1 Genbank gene 4290804 4293224 . - . ID=gene-PUW35_20830;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=PUW35_20830 CP118132.1 Protein Homology CDS 4290804 4293224 . - 0 ID=cds-WJG92884.1;Parent=gene-PUW35_20830;Dbxref=NCBI_GP:WJG92884.1;Name=WJG92884.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=PUW35_20830;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WJG92884.1;transl_table=11 CP118132.1 Genbank gene 4293395 4293763 . + . ID=gene-PUW35_20835;Name=PUW35_20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20835 CP118132.1 Protein Homology CDS 4293395 4293763 . + 0 ID=cds-WJG92885.1;Parent=gene-PUW35_20835;Dbxref=NCBI_GP:WJG92885.1;Name=WJG92885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=PUW35_20835;product=diacylglycerol kinase;protein_id=WJG92885.1;transl_table=11 CP118132.1 Genbank gene 4293871 4294479 . + . ID=gene-PUW35_20840;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=PUW35_20840 CP118132.1 Protein Homology CDS 4293871 4294479 . + 0 ID=cds-WJG92886.1;Parent=gene-PUW35_20840;Dbxref=NCBI_GP:WJG92886.1;Name=WJG92886.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=PUW35_20840;product=transcriptional repressor LexA;protein_id=WJG92886.1;transl_table=11 CP118132.1 Genbank pseudogene 4294658 4295982 . + . ID=gene-PUW35_20845;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=pseudogene;locus_tag=PUW35_20845;pseudo=true CP118132.1 Protein Homology CDS 4294658 4295982 . + 0 ID=cds-PUW35_20845;Parent=gene-PUW35_20845;Note=frameshifted;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=PUW35_20845;product=MATE family efflux transporter DinF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4295979 4296092 . + . ID=gene-PUW35_20850;Name=PUW35_20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20850 CP118132.1 Protein Homology CDS 4295979 4296092 . + 0 ID=cds-WJG92887.1;Parent=gene-PUW35_20850;Dbxref=NCBI_GP:WJG92887.1;Name=WJG92887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=PUW35_20850;product=hypothetical protein;protein_id=WJG92887.1;transl_table=11 CP118132.1 Genbank gene 4296114 4296323 . + . ID=gene-PUW35_20855;Name=PUW35_20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20855 CP118132.1 Protein Homology CDS 4296114 4296323 . + 0 ID=cds-WJG95164.1;Parent=gene-PUW35_20855;Dbxref=NCBI_GP:WJG95164.1;Name=WJG95164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=PUW35_20855;product=CsbD family protein;protein_id=WJG95164.1;transl_table=11 CP118132.1 Genbank gene 4296422 4296937 . - . ID=gene-PUW35_20860;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=PUW35_20860 CP118132.1 Protein Homology CDS 4296422 4296937 . - 0 ID=cds-WJG92888.1;Parent=gene-PUW35_20860;Dbxref=NCBI_GP:WJG92888.1;Name=WJG92888.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=PUW35_20860;product=zinc uptake transcriptional repressor Zur;protein_id=WJG92888.1;transl_table=11 CP118132.1 Genbank pseudogene 4297184 4298493 . + . ID=gene-PUW35_20865;Name=PUW35_20865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_20865;pseudo=true CP118132.1 Protein Homology CDS 4297184 4298493 . + 0 ID=cds-PUW35_20865;Parent=gene-PUW35_20865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=PUW35_20865;product=conjugal transfer protein TraF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4298581 4299579 . + . ID=gene-PUW35_20870;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=PUW35_20870 CP118132.1 Protein Homology CDS 4298581 4299579 . + 0 ID=cds-WJG92889.1;Parent=gene-PUW35_20870;Dbxref=NCBI_GP:WJG92889.1;Name=WJG92889.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=PUW35_20870;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WJG92889.1;transl_table=11 CP118132.1 Genbank gene 4299747 4299989 . + . ID=gene-PUW35_20875;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=PUW35_20875 CP118132.1 Protein Homology CDS 4299747 4299989 . + 0 ID=cds-WJG92890.1;Parent=gene-PUW35_20875;Dbxref=NCBI_GP:WJG92890.1;Name=WJG92890.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=PUW35_20875;product=envelope stress response protein PspG;protein_id=WJG92890.1;transl_table=11 CP118132.1 Genbank gene 4300164 4301147 . - . ID=gene-PUW35_20880;Name=PUW35_20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20880 CP118132.1 Protein Homology CDS 4300164 4301147 . - 0 ID=cds-WJG92891.1;Parent=gene-PUW35_20880;Dbxref=NCBI_GP:WJG92891.1;Name=WJG92891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=PUW35_20880;product=quinone oxidoreductase;protein_id=WJG92891.1;transl_table=11 CP118132.1 Genbank pseudogene 4301212 4302626 . + . ID=gene-PUW35_20885;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=pseudogene;locus_tag=PUW35_20885;pseudo=true CP118132.1 Protein Homology CDS 4301212 4302626 . + 0 ID=cds-PUW35_20885;Parent=gene-PUW35_20885;Note=frameshifted;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=PUW35_20885;product=replicative DNA helicase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4302658 4303737 . + . ID=gene-PUW35_20890;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=PUW35_20890 CP118132.1 Protein Homology CDS 4302658 4303737 . + 0 ID=cds-WJG92892.1;Parent=gene-PUW35_20890;Dbxref=NCBI_GP:WJG92892.1;Name=WJG92892.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=PUW35_20890;product=alanine racemase;protein_id=WJG92892.1;transl_table=11 CP118132.1 Genbank gene 4303923 4305116 . + . ID=gene-PUW35_20895;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=PUW35_20895 CP118132.1 Protein Homology CDS 4303923 4305116 . + 0 ID=cds-WJG92893.1;Parent=gene-PUW35_20895;Dbxref=NCBI_GP:WJG92893.1;Name=WJG92893.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=PUW35_20895;product=aromatic amino acid transaminase;protein_id=WJG92893.1;transl_table=11 CP118132.1 Genbank gene 4305303 4306016 . + . ID=gene-PUW35_20900;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=PUW35_20900 CP118132.1 Protein Homology CDS 4305303 4306016 . + 0 ID=cds-WJG92894.1;Parent=gene-PUW35_20900;Dbxref=NCBI_GP:WJG92894.1;Name=WJG92894.1;Ontology_term=GO:0003993;gbkey=CDS;gene=aphA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=PUW35_20900;product=acid phosphatase AphA;protein_id=WJG92894.1;transl_table=11 CP118132.1 Genbank gene 4306145 4306561 . + . ID=gene-PUW35_20905;Name=PUW35_20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20905 CP118132.1 Protein Homology CDS 4306145 4306561 . + 0 ID=cds-WJG92895.1;Parent=gene-PUW35_20905;Dbxref=NCBI_GP:WJG92895.1;Name=WJG92895.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=PUW35_20905;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WJG92895.1;transl_table=11 CP118132.1 Genbank gene 4306564 4306920 . + . ID=gene-PUW35_20910;Name=PUW35_20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20910 CP118132.1 Protein Homology CDS 4306564 4306920 . + 0 ID=cds-WJG92896.1;Parent=gene-PUW35_20910;Dbxref=NCBI_GP:WJG92896.1;Name=WJG92896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=PUW35_20910;product=MmcQ/YjbR family DNA-binding protein;protein_id=WJG92896.1;transl_table=11 CP118132.1 Genbank gene 4306921 4307259 . - . ID=gene-PUW35_20915;Name=PUW35_20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20915 CP118132.1 Protein Homology CDS 4306921 4307259 . - 0 ID=cds-WJG92897.1;Parent=gene-PUW35_20915;Dbxref=NCBI_GP:WJG92897.1;Name=WJG92897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=PUW35_20915;product=hypothetical protein;protein_id=WJG92897.1;transl_table=11 CP118132.1 Genbank gene 4307246 4307701 . - . ID=gene-PUW35_20920;Name=PUW35_20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20920 CP118132.1 Protein Homology CDS 4307246 4307701 . - 0 ID=cds-WJG92898.1;Parent=gene-PUW35_20920;Dbxref=NCBI_GP:WJG92898.1;Name=WJG92898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=PUW35_20920;product=hypothetical protein;protein_id=WJG92898.1;transl_table=11 CP118132.1 Genbank pseudogene 4307833 4310657 . - . ID=gene-PUW35_20925;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=pseudogene;locus_tag=PUW35_20925;pseudo=true CP118132.1 Protein Homology CDS 4307833 4310657 . - 0 ID=cds-PUW35_20925;Parent=gene-PUW35_20925;Note=frameshifted;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=PUW35_20925;product=excinuclease ABC subunit UvrA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4310905 4311435 . + . ID=gene-PUW35_20930;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=PUW35_20930 CP118132.1 Protein Homology CDS 4310905 4311435 . + 0 ID=cds-WJG92899.1;Parent=gene-PUW35_20930;Dbxref=NCBI_GP:WJG92899.1;Name=WJG92899.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=PUW35_20930;product=single-stranded DNA-binding protein SSB1;protein_id=WJG92899.1;transl_table=11 CP118132.1 Genbank gene 4312476 4313108 . + . ID=gene-PUW35_20935;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=PUW35_20935 CP118132.1 Protein Homology CDS 4312476 4313108 . + 0 ID=cds-WJG92900.1;Parent=gene-PUW35_20935;Dbxref=NCBI_GP:WJG92900.1;Name=WJG92900.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=PUW35_20935;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WJG92900.1;transl_table=11 CP118132.1 Genbank gene 4313105 4314493 . + . ID=gene-PUW35_20940;Name=PUW35_20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20940 CP118132.1 Protein Homology CDS 4313105 4314493 . + 0 ID=cds-WJG92901.1;Parent=gene-PUW35_20940;Dbxref=NCBI_GP:WJG92901.1;Name=WJG92901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=PUW35_20940;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WJG92901.1;transl_table=11 CP118132.1 Genbank gene 4314483 4315802 . + . ID=gene-PUW35_20945;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=PUW35_20945 CP118132.1 Protein Homology CDS 4314483 4315802 . + 0 ID=cds-WJG92902.1;Parent=gene-PUW35_20945;Dbxref=NCBI_GP:WJG92902.1;Name=WJG92902.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=PUW35_20945;product=SPI-4 type I secretion system protein SiiC;protein_id=WJG92902.1;transl_table=11 CP118132.1 Genbank gene 4315799 4317076 . + . ID=gene-PUW35_20950;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=PUW35_20950 CP118132.1 Protein Homology CDS 4315799 4317076 . + 0 ID=cds-WJG92903.1;Parent=gene-PUW35_20950;Dbxref=NCBI_GP:WJG92903.1;Name=WJG92903.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=PUW35_20950;product=SPI-4 type I secretion system protein SiiD;protein_id=WJG92903.1;transl_table=11 CP118132.1 Genbank gene 4317093 4333772 . + . ID=gene-PUW35_20955;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=PUW35_20955 CP118132.1 Protein Homology CDS 4317093 4333772 . + 0 ID=cds-WJG92904.1;Parent=gene-PUW35_20955;Dbxref=NCBI_GP:WJG92904.1;Name=WJG92904.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=PUW35_20955;product=non-fimbrial adhesin SiiE;protein_id=WJG92904.1;transl_table=11 CP118132.1 Genbank gene 4333812 4335878 . + . ID=gene-PUW35_20960;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=PUW35_20960 CP118132.1 Protein Homology CDS 4333812 4335878 . + 0 ID=cds-WJG92905.1;Parent=gene-PUW35_20960;Dbxref=NCBI_GP:WJG92905.1;Name=WJG92905.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=PUW35_20960;product=SPI-4 type I secretion system protein SiiF;protein_id=WJG92905.1;transl_table=11 CP118132.1 Genbank gene 4336156 4336437 . - . ID=gene-PUW35_20965;Name=PUW35_20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20965 CP118132.1 Protein Homology CDS 4336156 4336437 . - 0 ID=cds-WJG92906.1;Parent=gene-PUW35_20965;Dbxref=NCBI_GP:WJG92906.1;Name=WJG92906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=PUW35_20965;product=YjcB family protein;protein_id=WJG92906.1;transl_table=11 CP118132.1 Genbank pseudogene 4336999 4338593 . + . ID=gene-PUW35_20970;Name=PUW35_20970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_20970;pseudo=true CP118132.1 Protein Homology CDS 4336999 4338593 . + 0 ID=cds-PUW35_20970;Parent=gene-PUW35_20970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=PUW35_20970;product=EAL domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4338581 4338904 . - . ID=gene-PUW35_20975;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=PUW35_20975 CP118132.1 Protein Homology CDS 4338581 4338904 . - 0 ID=cds-WJG92907.1;Parent=gene-PUW35_20975;Dbxref=NCBI_GP:WJG92907.1;Name=WJG92907.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=PUW35_20975;product=superoxide response transcriptional regulator SoxS;protein_id=WJG92907.1;transl_table=11 CP118132.1 Genbank pseudogene 4338991 4339447 . + . ID=gene-PUW35_20980;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=pseudogene;locus_tag=PUW35_20980;pseudo=true CP118132.1 Protein Homology CDS 4338991 4339447 . + 0 ID=cds-PUW35_20980;Parent=gene-PUW35_20980;Note=frameshifted;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=PUW35_20980;product=redox-sensitive transcriptional activator SoxR;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4339740 4340408 . + . ID=gene-PUW35_20985;Name=PUW35_20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_20985 CP118132.1 Protein Homology CDS 4339740 4340408 . + 0 ID=cds-WJG92908.1;Parent=gene-PUW35_20985;Dbxref=NCBI_GP:WJG92908.1;Name=WJG92908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=PUW35_20985;product=glutathione S-transferase;protein_id=WJG92908.1;transl_table=11 CP118132.1 Genbank pseudogene 4340756 4342104 . + . ID=gene-PUW35_20990;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=pseudogene;gene_synonym=yjcD;locus_tag=PUW35_20990;pseudo=true CP118132.1 Protein Homology CDS 4340756 4342104 . + 0 ID=cds-PUW35_20990;Parent=gene-PUW35_20990;Note=frameshifted;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=PUW35_20990;product=guanine/hypoxanthine transporter GhxP;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4342254 4343898 . + . ID=gene-PUW35_20995;Name=PUW35_20995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_20995;pseudo=true CP118132.1 Protein Homology CDS 4342254 4343898 . + 0 ID=cds-PUW35_20995;Parent=gene-PUW35_20995;Note=frameshifted;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=PUW35_20995;product=Na+/H+ antiporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4343993 4344880 . - . ID=gene-PUW35_21000;Name=PUW35_21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21000 CP118132.1 Protein Homology CDS 4343993 4344880 . - 0 ID=cds-WJG92909.1;Parent=gene-PUW35_21000;Dbxref=NCBI_GP:WJG92909.1;Name=WJG92909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=PUW35_21000;product=LysR family transcriptional regulator;protein_id=WJG92909.1;transl_table=11 CP118132.1 Genbank gene 4344984 4345394 . + . ID=gene-PUW35_21005;Name=PUW35_21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21005 CP118132.1 Protein Homology CDS 4344984 4345394 . + 0 ID=cds-WJG92910.1;Parent=gene-PUW35_21005;Dbxref=NCBI_GP:WJG92910.1;Name=WJG92910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=PUW35_21005;product=CidA/LrgA family protein;protein_id=WJG92910.1;transl_table=11 CP118132.1 Genbank gene 4345387 4346076 . + . ID=gene-PUW35_21010;Name=PUW35_21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21010 CP118132.1 Protein Homology CDS 4345387 4346076 . + 0 ID=cds-WJG92911.1;Parent=gene-PUW35_21010;Dbxref=NCBI_GP:WJG92911.1;Name=WJG92911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=PUW35_21010;product=LrgB family protein;protein_id=WJG92911.1;transl_table=11 CP118132.1 Genbank gene 4346114 4347763 . - . ID=gene-PUW35_21015;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=PUW35_21015 CP118132.1 Protein Homology CDS 4346114 4347763 . - 0 ID=cds-WJG92912.1;Parent=gene-PUW35_21015;Dbxref=NCBI_GP:WJG92912.1;Name=WJG92912.1;Ontology_term=GO:0006814,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=PUW35_21015;product=cation/acetate symporter ActP;protein_id=WJG92912.1;transl_table=11 CP118132.1 Genbank gene 4347760 4348074 . - . ID=gene-PUW35_21020;Name=PUW35_21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21020 CP118132.1 Protein Homology CDS 4347760 4348074 . - 0 ID=cds-WJG95165.1;Parent=gene-PUW35_21020;Dbxref=NCBI_GP:WJG95165.1;Name=WJG95165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=PUW35_21020;product=DUF485 domain-containing protein;protein_id=WJG95165.1;transl_table=11 CP118132.1 Genbank pseudogene 4348320 4350277 . - . ID=gene-PUW35_21025;Name=acs;gbkey=Gene;gene=acs;gene_biotype=pseudogene;locus_tag=PUW35_21025;pseudo=true CP118132.1 Protein Homology CDS 4348320 4350277 . - 0 ID=cds-PUW35_21025;Parent=gene-PUW35_21025;Note=frameshifted;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=PUW35_21025;product=acetate--CoA ligase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4350709 4352145 . + . ID=gene-PUW35_21030;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=PUW35_21030 CP118132.1 Protein Homology CDS 4350709 4352145 . + 0 ID=cds-WJG92913.1;Parent=gene-PUW35_21030;Dbxref=NCBI_GP:WJG92913.1;Name=WJG92913.1;Ontology_term=GO:0042279;gbkey=CDS;gene=nrfA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=PUW35_21030;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WJG92913.1;transl_table=11 CP118132.1 Genbank gene 4352257 4352823 . + . ID=gene-PUW35_21035;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=PUW35_21035 CP118132.1 Protein Homology CDS 4352257 4352823 . + 0 ID=cds-WJG92914.1;Parent=gene-PUW35_21035;Dbxref=NCBI_GP:WJG92914.1;Name=WJG92914.1;Ontology_term=GO:0006807,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=PUW35_21035;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WJG92914.1;transl_table=11 CP118132.1 Genbank gene 4352820 4353491 . + . ID=gene-PUW35_21040;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=PUW35_21040 CP118132.1 Protein Homology CDS 4352820 4353491 . + 0 ID=cds-WJG92915.1;Parent=gene-PUW35_21040;Dbxref=NCBI_GP:WJG92915.1;Name=WJG92915.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=PUW35_21040;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WJG92915.1;transl_table=11 CP118132.1 Genbank gene 4353488 4354444 . + . ID=gene-PUW35_21045;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=PUW35_21045 CP118132.1 Protein Homology CDS 4353488 4354444 . + 0 ID=cds-WJG92916.1;Parent=gene-PUW35_21045;Dbxref=NCBI_GP:WJG92916.1;Name=WJG92916.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=PUW35_21045;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WJG92916.1;transl_table=11 CP118132.1 Genbank pseudogene 4354437 4356675 . + . ID=gene-PUW35_21050;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=PUW35_21050;pseudo=true CP118132.1 Protein Homology CDS 4354437 4356675 . + 0 ID=cds-PUW35_21050;Parent=gene-PUW35_21050;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=PUW35_21050;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4356672 4357292 . + . ID=gene-PUW35_21055;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=PUW35_21055 CP118132.1 Protein Homology CDS 4356672 4357292 . + 0 ID=cds-WJG92917.1;Parent=gene-PUW35_21055;Dbxref=NCBI_GP:WJG92917.1;Name=WJG92917.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=PUW35_21055;product=heme lyase NrfEFG subunit NrfG;protein_id=WJG92917.1;transl_table=11 CP118132.1 Genbank gene 4357637 4358947 . + . ID=gene-PUW35_21060;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=PUW35_21060 CP118132.1 Protein Homology CDS 4357637 4358947 . + 0 ID=cds-WJG92918.1;Parent=gene-PUW35_21060;Dbxref=NCBI_GP:WJG92918.1;Name=WJG92918.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=PUW35_21060;product=glutamate/aspartate:proton symporter GltP;protein_id=WJG92918.1;transl_table=11 CP118132.1 Genbank gene 4359105 4359794 . - . ID=gene-PUW35_21065;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=PUW35_21065 CP118132.1 Protein Homology CDS 4359105 4359794 . - 0 ID=cds-WJG92919.1;Parent=gene-PUW35_21065;Dbxref=NCBI_GP:WJG92919.1;Name=WJG92919.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=PUW35_21065;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WJG92919.1;transl_table=11 CP118132.1 Genbank pseudogene 4359971 4362117 . - . ID=gene-PUW35_21070;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=pseudogene;locus_tag=PUW35_21070;pseudo=true CP118132.1 Protein Homology CDS 4359971 4362117 . - 0 ID=cds-PUW35_21070;Parent=gene-PUW35_21070;Note=frameshifted;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=PUW35_21070;product=formate dehydrogenase subunit alpha;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4362472 4363379 . - . ID=gene-PUW35_21075;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=pseudogene;locus_tag=PUW35_21075;pseudo=true CP118132.1 Protein Homology CDS 4362472 4363379 . - 0 ID=cds-PUW35_21075;Parent=gene-PUW35_21075;Note=frameshifted;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=PUW35_21075;product=lipid A hydroxylase LpxO;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4363637 4364071 . - . ID=gene-PUW35_21080;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=PUW35_21080 CP118132.1 Protein Homology CDS 4363637 4364071 . - 0 ID=cds-WJG92920.1;Parent=gene-PUW35_21080;Dbxref=NCBI_GP:WJG92920.1;Name=WJG92920.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=PUW35_21080;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WJG92920.1;transl_table=11 CP118132.1 Genbank gene 4364223 4364666 . - . ID=gene-PUW35_21085;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=PUW35_21085 CP118132.1 Protein Homology CDS 4364223 4364666 . - 0 ID=cds-WJG92921.1;Parent=gene-PUW35_21085;Dbxref=NCBI_GP:WJG92921.1;Name=WJG92921.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=PUW35_21085;product=VOC family metalloprotein YjdN;protein_id=WJG92921.1;transl_table=11 CP118132.1 Genbank gene 4364786 4365121 . - . ID=gene-PUW35_21090;Name=PUW35_21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21090 CP118132.1 Protein Homology CDS 4364786 4365121 . - 0 ID=cds-WJG92922.1;Parent=gene-PUW35_21090;Dbxref=NCBI_GP:WJG92922.1;Name=WJG92922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=PUW35_21090;product=zinc ribbon domain-containing protein YjdM;protein_id=WJG92922.1;transl_table=11 CP118132.1 Genbank gene 4365589 4367091 . + . ID=gene-PUW35_21095;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=PUW35_21095 CP118132.1 Protein Homology CDS 4365589 4367091 . + 0 ID=cds-WJG92923.1;Parent=gene-PUW35_21095;Dbxref=NCBI_GP:WJG92923.1;Name=WJG92923.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=PUW35_21095;product=glycine betaine/L-proline transporter ProP;protein_id=WJG92923.1;transl_table=11 CP118132.1 Genbank gene 4367161 4367250 . + . ID=gene-PUW35_21100;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=PUW35_21100 CP118132.1 Protein Homology CDS 4367161 4367250 . + 0 ID=cds-WJG92924.1;Parent=gene-PUW35_21100;Dbxref=NCBI_GP:WJG92924.1;Name=WJG92924.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=PUW35_21100;product=LpxT activity modulator PmrR;protein_id=WJG92924.1;transl_table=11 CP118132.1 Genbank gene 4367258 4368328 . - . ID=gene-PUW35_21105;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=PUW35_21105 CP118132.1 Protein Homology CDS 4367258 4368328 . - 0 ID=cds-WJG95166.1;Parent=gene-PUW35_21105;Dbxref=NCBI_GP:WJG95166.1;Name=WJG95166.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=PUW35_21105;product=two-component system sensor histidine kinase PmrB;protein_id=WJG95166.1;transl_table=11 CP118132.1 Genbank gene 4368338 4369006 . - . ID=gene-PUW35_21110;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=PUW35_21110 CP118132.1 Protein Homology CDS 4368338 4369006 . - 0 ID=cds-WJG92925.1;Parent=gene-PUW35_21110;Dbxref=NCBI_GP:WJG92925.1;Name=WJG92925.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=PUW35_21110;product=two-component system response regulator PmrA;protein_id=WJG92925.1;transl_table=11 CP118132.1 Genbank gene 4369003 4370646 . - . ID=gene-PUW35_21115;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=PUW35_21115 CP118132.1 Protein Homology CDS 4369003 4370646 . - 0 ID=cds-WJG92926.1;Parent=gene-PUW35_21115;Dbxref=NCBI_GP:WJG92926.1;Name=WJG92926.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=PUW35_21115;product=phosphoethanolamine transferase EptA;protein_id=WJG92926.1;transl_table=11 CP118132.1 Genbank pseudogene 4370780 4372116 . - . ID=gene-PUW35_21120;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=pseudogene;locus_tag=PUW35_21120;pseudo=true CP118132.1 Protein Homology CDS 4370780 4372116 . - 0 ID=cds-PUW35_21120;Parent=gene-PUW35_21120;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=PUW35_21120;product=arginine/agmatine antiporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4372256 4373017 . - . ID=gene-PUW35_21125;Name=PUW35_21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21125 CP118132.1 Protein Homology CDS 4372256 4373017 . - 0 ID=cds-WJG92927.1;Parent=gene-PUW35_21125;Dbxref=NCBI_GP:WJG92927.1;Name=WJG92927.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=PUW35_21125;product=AraC family transcriptional regulator;protein_id=WJG92927.1;transl_table=11 CP118132.1 Genbank pseudogene 4373315 4375581 . - . ID=gene-PUW35_21130;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=pseudogene;locus_tag=PUW35_21130;pseudo=true CP118132.1 Protein Homology CDS 4373315 4375581 . - 0 ID=cds-PUW35_21130;Parent=gene-PUW35_21130;Note=frameshifted;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=PUW35_21130;product=arginine decarboxylase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4375814 4376746 . - . ID=gene-PUW35_21135;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=PUW35_21135 CP118132.1 Protein Homology CDS 4375814 4376746 . - 0 ID=cds-WJG92928.1;Parent=gene-PUW35_21135;Dbxref=NCBI_GP:WJG92928.1;Name=WJG92928.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=PUW35_21135;product=transcriptional regulator MelR;protein_id=WJG92928.1;transl_table=11 CP118132.1 Genbank gene 4377015 4378370 . + . ID=gene-PUW35_21140;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=PUW35_21140 CP118132.1 Protein Homology CDS 4377015 4378370 . + 0 ID=cds-WJG92929.1;Parent=gene-PUW35_21140;Dbxref=NCBI_GP:WJG92929.1;Name=WJG92929.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=PUW35_21140;product=alpha-galactosidase;protein_id=WJG92929.1;transl_table=11 CP118132.1 Genbank gene 4378454 4379884 . + . ID=gene-PUW35_21145;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=PUW35_21145 CP118132.1 Protein Homology CDS 4378454 4379884 . + 0 ID=cds-WJG92930.1;Parent=gene-PUW35_21145;Dbxref=NCBI_GP:WJG92930.1;Name=WJG92930.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=PUW35_21145;product=melibiose:sodium transporter MelB;protein_id=WJG92930.1;transl_table=11 CP118132.1 Genbank gene 4379991 4381637 . - . ID=gene-PUW35_21150;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=PUW35_21150 CP118132.1 Protein Homology CDS 4379991 4381637 . - 0 ID=cds-WJG92931.1;Parent=gene-PUW35_21150;Dbxref=NCBI_GP:WJG92931.1;Name=WJG92931.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=PUW35_21150;product=class I fumarate hydratase FumA;protein_id=WJG92931.1;transl_table=11 CP118132.1 Genbank gene 4381733 4383073 . - . ID=gene-PUW35_21155;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=PUW35_21155 CP118132.1 Protein Homology CDS 4381733 4383073 . - 0 ID=cds-WJG92932.1;Parent=gene-PUW35_21155;Dbxref=NCBI_GP:WJG92932.1;Name=WJG92932.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=PUW35_21155;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WJG92932.1;transl_table=11 CP118132.1 Genbank gene 4383220 4383486 . - . ID=gene-PUW35_21160;Name=PUW35_21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21160 CP118132.1 Protein Homology CDS 4383220 4383486 . - 0 ID=cds-WJG92933.1;Parent=gene-PUW35_21160;Dbxref=NCBI_GP:WJG92933.1;Name=WJG92933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=PUW35_21160;product=hypothetical protein;protein_id=WJG92933.1;transl_table=11 CP118132.1 Genbank gene 4383803 4384522 . - . ID=gene-PUW35_21165;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=PUW35_21165 CP118132.1 Protein Homology CDS 4383803 4384522 . - 0 ID=cds-WJG92934.1;Parent=gene-PUW35_21165;Dbxref=NCBI_GP:WJG92934.1;Name=WJG92934.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=PUW35_21165;product=two-component system response regulator DcuR;protein_id=WJG92934.1;transl_table=11 CP118132.1 Genbank pseudogene 4384519 4386149 . - . ID=gene-PUW35_21170;Name=PUW35_21170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21170;pseudo=true CP118132.1 Protein Homology CDS 4384519 4386149 . - 0 ID=cds-PUW35_21170;Parent=gene-PUW35_21170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=PUW35_21170;product=sensor histidine kinase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4386524 4388953 . + . ID=gene-PUW35_21175;Name=PUW35_21175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21175;pseudo=true CP118132.1 Protein Homology CDS 4386524 4388953 . + 0 ID=cds-PUW35_21175;Parent=gene-PUW35_21175;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=PUW35_21175;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4388967 4389593 . + . ID=gene-PUW35_21180;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW35_21180 CP118132.1 Protein Homology CDS 4388967 4389593 . + 0 ID=cds-WJG92935.1;Parent=gene-PUW35_21180;Dbxref=NCBI_GP:WJG92935.1;Name=WJG92935.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=PUW35_21180;product=dimethylsulfoxide reductase subunit B;protein_id=WJG92935.1;transl_table=11 CP118132.1 Genbank gene 4389586 4390359 . + . ID=gene-PUW35_21185;Name=PUW35_21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21185 CP118132.1 Protein Homology CDS 4389586 4390359 . + 0 ID=cds-WJG92936.1;Parent=gene-PUW35_21185;Dbxref=NCBI_GP:WJG92936.1;Name=WJG92936.1;Ontology_term=GO:0019645,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=PUW35_21185;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJG92936.1;transl_table=11 CP118132.1 Genbank gene 4390374 4391027 . + . ID=gene-PUW35_21190;Name=PUW35_21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21190 CP118132.1 Protein Homology CDS 4390374 4391027 . + 0 ID=cds-WJG92937.1;Parent=gene-PUW35_21190;Dbxref=NCBI_GP:WJG92937.1;Name=WJG92937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463173.1;locus_tag=PUW35_21190;product=molecular chaperone;protein_id=WJG92937.1;transl_table=11 CP118132.1 Genbank gene 4391111 4392511 . - . ID=gene-PUW35_21195;Name=PUW35_21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21195 CP118132.1 Protein Homology CDS 4391111 4392511 . - 0 ID=cds-WJG92938.1;Parent=gene-PUW35_21195;Dbxref=NCBI_GP:WJG92938.1;Name=WJG92938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=PUW35_21195;product=DUF1996 domain-containing protein;protein_id=WJG92938.1;transl_table=11 CP118132.1 Genbank gene 4392815 4393720 . + . ID=gene-PUW35_21200;Name=PUW35_21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21200 CP118132.1 Protein Homology CDS 4392815 4393720 . + 0 ID=cds-WJG92939.1;Parent=gene-PUW35_21200;Dbxref=NCBI_GP:WJG92939.1;Name=WJG92939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=PUW35_21200;product=YjiK family protein;protein_id=WJG92939.1;transl_table=11 CP118132.1 Genbank pseudogene 4394010 4394141 . - . ID=gene-PUW35_21205;Name=PUW35_21205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21205;pseudo=true CP118132.1 Protein Homology CDS 4394010 4394141 . - 0 ID=cds-PUW35_21205;Parent=gene-PUW35_21205;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=PUW35_21205;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4394253 4394501 . - . ID=gene-PUW35_21210;Name=PUW35_21210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21210;pseudo=true CP118132.1 Protein Homology CDS 4394253 4394501 . - 0 ID=cds-PUW35_21210;Parent=gene-PUW35_21210;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=PUW35_21210;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4394626 4394808 . + . ID=gene-PUW35_21215;Name=PUW35_21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21215 CP118132.1 Protein Homology CDS 4394626 4394808 . + 0 ID=cds-WJG92940.1;Parent=gene-PUW35_21215;Dbxref=NCBI_GP:WJG92940.1;Name=WJG92940.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=PUW35_21215;product=ATP-binding cassette domain-containing protein;protein_id=WJG92940.1;transl_table=11 CP118132.1 Genbank gene 4394801 4395088 . - . ID=gene-PUW35_21220;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=PUW35_21220 CP118132.1 Protein Homology CDS 4394801 4395088 . - 0 ID=cds-WJG92941.1;Parent=gene-PUW35_21220;Dbxref=NCBI_GP:WJG92941.1;Name=WJG92941.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=PUW35_21220;product=transcriptional regulator RtsB;protein_id=WJG92941.1;transl_table=11 CP118132.1 Genbank gene 4395085 4395960 . - . ID=gene-PUW35_21225;Name=PUW35_21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21225 CP118132.1 Protein Homology CDS 4395085 4395960 . - 0 ID=cds-WJG92942.1;Parent=gene-PUW35_21225;Dbxref=NCBI_GP:WJG92942.1;Name=WJG92942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=PUW35_21225;product=AraC family transcriptional regulator;protein_id=WJG92942.1;transl_table=11 CP118132.1 Genbank gene 4396226 4396447 . - . ID=gene-PUW35_21230;Name=PUW35_21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21230 CP118132.1 Protein Homology CDS 4396226 4396447 . - 0 ID=cds-WJG92943.1;Parent=gene-PUW35_21230;Dbxref=NCBI_GP:WJG92943.1;Name=WJG92943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=PUW35_21230;product=hypothetical protein;protein_id=WJG92943.1;transl_table=11 CP118132.1 Genbank gene 4396764 4397057 . + . ID=gene-PUW35_21235;Name=PUW35_21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21235 CP118132.1 Protein Homology CDS 4396764 4397057 . + 0 ID=cds-WJG92944.1;Parent=gene-PUW35_21235;Dbxref=NCBI_GP:WJG92944.1;Name=WJG92944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=PUW35_21235;product=DUF1778 domain-containing protein;protein_id=WJG92944.1;transl_table=11 CP118132.1 Genbank gene 4397054 4397545 . + . ID=gene-PUW35_21240;Name=PUW35_21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21240 CP118132.1 Protein Homology CDS 4397054 4397545 . + 0 ID=cds-WJG92945.1;Parent=gene-PUW35_21240;Dbxref=NCBI_GP:WJG92945.1;Name=WJG92945.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=PUW35_21240;product=GNAT family N-acetyltransferase;protein_id=WJG92945.1;transl_table=11 CP118132.1 Genbank gene 4397793 4398545 . - . ID=gene-PUW35_21245;Name=PUW35_21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21245 CP118132.1 Protein Homology CDS 4397793 4398545 . - 0 ID=cds-WJG92946.1;Parent=gene-PUW35_21245;Dbxref=NCBI_GP:WJG92946.1;Name=WJG92946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=PUW35_21245;product=non-specific acid phosphatase;protein_id=WJG92946.1;transl_table=11 CP118132.1 Genbank pseudogene 4398645 4398722 . - . ID=gene-PUW35_21250;Name=PUW35_21250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21250;pseudo=true CP118132.1 Protein Homology CDS 4398645 4398722 . - 0 ID=cds-PUW35_21250;Parent=gene-PUW35_21250;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=PUW35_21250;product=porin family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4399102 4399176 . + . ID=gene-PUW35_21255;Name=PUW35_21255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21255;pseudo=true CP118132.1 Protein Homology CDS 4399102 4399176 . + 0 ID=cds-PUW35_21255;Parent=gene-PUW35_21255;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565644.1;locus_tag=PUW35_21255;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4399256 4399331 . - . ID=gene-PUW35_21260;Name=PUW35_21260;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_21260 CP118132.1 tRNAscan-SE tRNA 4399256 4399331 . - . ID=rna-PUW35_21260;Parent=gene-PUW35_21260;anticodon=(pos:complement(4399296..4399298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_21260;product=tRNA-Phe CP118132.1 tRNAscan-SE exon 4399256 4399331 . - . ID=exon-PUW35_21260-1;Parent=rna-PUW35_21260;anticodon=(pos:complement(4399296..4399298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_21260;product=tRNA-Phe CP118132.1 Genbank gene 4399447 4400022 . - . ID=gene-PUW35_21265;Name=PUW35_21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21265 CP118132.1 Protein Homology CDS 4399447 4400022 . - 0 ID=cds-WJG92947.1;Parent=gene-PUW35_21265;Dbxref=NCBI_GP:WJG92947.1;Name=WJG92947.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=PUW35_21265;product=transcriptional regulator;protein_id=WJG92947.1;transl_table=11 CP118132.1 Genbank gene 4400059 4401762 . - . ID=gene-PUW35_21270;Name=PUW35_21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21270 CP118132.1 Protein Homology CDS 4400059 4401762 . - 0 ID=cds-WJG92948.1;Parent=gene-PUW35_21270;Dbxref=NCBI_GP:WJG92948.1;Name=WJG92948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=PUW35_21270;product=protein-disulfide reductase DsbD;protein_id=WJG92948.1;transl_table=11 CP118132.1 Genbank gene 4401738 4402085 . - . ID=gene-PUW35_21275;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=PUW35_21275 CP118132.1 Protein Homology CDS 4401738 4402085 . - 0 ID=cds-WJG92949.1;Parent=gene-PUW35_21275;Dbxref=NCBI_GP:WJG92949.1;Name=WJG92949.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=PUW35_21275;product=divalent cation tolerance protein CutA;protein_id=WJG92949.1;transl_table=11 CP118132.1 Genbank gene 4402206 4403507 . - . ID=gene-PUW35_21280;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=PUW35_21280 CP118132.1 Protein Homology CDS 4402206 4403507 . - 0 ID=cds-WJG92950.1;Parent=gene-PUW35_21280;Dbxref=NCBI_GP:WJG92950.1;Name=WJG92950.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=PUW35_21280;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WJG92950.1;transl_table=11 CP118132.1 Genbank gene 4403622 4405058 . - . ID=gene-PUW35_21285;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=PUW35_21285 CP118132.1 Protein Homology CDS 4403622 4405058 . - 0 ID=cds-WJG92951.1;Parent=gene-PUW35_21285;Dbxref=NCBI_GP:WJG92951.1;Name=WJG92951.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=PUW35_21285;product=aspartate ammonia-lyase;protein_id=WJG92951.1;transl_table=11 CP118132.1 Genbank gene 4405399 4405875 . + . ID=gene-PUW35_21290;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=PUW35_21290 CP118132.1 Protein Homology CDS 4405399 4405875 . + 0 ID=cds-WJG92952.1;Parent=gene-PUW35_21290;Dbxref=NCBI_GP:WJG92952.1;Name=WJG92952.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=PUW35_21290;product=membrane protein FxsA;protein_id=WJG92952.1;transl_table=11 CP118132.1 Genbank pseudogene 4405934 4407171 . - . ID=gene-PUW35_21295;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=pseudogene;locus_tag=PUW35_21295;pseudo=true CP118132.1 Protein Homology CDS 4405934 4407171 . - 0 ID=cds-PUW35_21295;Parent=gene-PUW35_21295;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=PUW35_21295;product=L-methionine/branched-chain amino acid transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4407448 4407741 . + . ID=gene-PUW35_21300;Name=PUW35_21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21300 CP118132.1 Protein Homology CDS 4407448 4407741 . + 0 ID=cds-WJG95167.1;Parent=gene-PUW35_21300;Dbxref=NCBI_GP:WJG95167.1;Name=WJG95167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=PUW35_21300;product=co-chaperone GroES;protein_id=WJG95167.1;transl_table=11 CP118132.1 Genbank gene 4407785 4409431 . + . ID=gene-PUW35_21305;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=PUW35_21305 CP118132.1 Protein Homology CDS 4407785 4409431 . + 0 ID=cds-WJG92953.1;Parent=gene-PUW35_21305;Dbxref=NCBI_GP:WJG92953.1;Name=WJG92953.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=PUW35_21305;product=chaperonin GroEL;protein_id=WJG92953.1;transl_table=11 CP118132.1 Genbank gene 4409675 4410028 . + . ID=gene-PUW35_21310;Name=PUW35_21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21310 CP118132.1 Protein Homology CDS 4409675 4410028 . + 0 ID=cds-WJG92954.1;Parent=gene-PUW35_21310;Dbxref=NCBI_GP:WJG92954.1;Name=WJG92954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=PUW35_21310;product=DUF4156 domain-containing protein;protein_id=WJG92954.1;transl_table=11 CP118132.1 Genbank pseudogene 4410076 4410933 . - . ID=gene-PUW35_21315;Name=PUW35_21315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21315;pseudo=true CP118132.1 Protein Homology CDS 4410076 4410933 . - 0 ID=cds-PUW35_21315;Parent=gene-PUW35_21315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=PUW35_21315;product=YjeJ family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4411215 4412243 . - . ID=gene-PUW35_21320;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=PUW35_21320 CP118132.1 Protein Homology CDS 4411215 4412243 . - 0 ID=cds-WJG92955.1;Parent=gene-PUW35_21320;Dbxref=NCBI_GP:WJG92955.1;Name=WJG92955.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=PUW35_21320;product=EF-P beta-lysylation protein EpmB;protein_id=WJG92955.1;transl_table=11 CP118132.1 Genbank gene 4412284 4412850 . + . ID=gene-PUW35_21325;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=PUW35_21325 CP118132.1 Protein Homology CDS 4412284 4412850 . + 0 ID=cds-WJG92956.1;Parent=gene-PUW35_21325;Dbxref=NCBI_GP:WJG92956.1;Name=WJG92956.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=PUW35_21325;product=elongation factor P;protein_id=WJG92956.1;transl_table=11 CP118132.1 Genbank gene 4412911 4413045 . + . ID=gene-PUW35_21330;Name=PUW35_21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21330 CP118132.1 Protein Homology CDS 4412911 4413045 . + 0 ID=cds-WJG95168.1;Parent=gene-PUW35_21330;Dbxref=NCBI_GP:WJG95168.1;Name=WJG95168.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=PUW35_21330;product=entericidin A/B family lipoprotein;protein_id=WJG95168.1;transl_table=11 CP118132.1 Genbank gene 4413153 4413299 . + . ID=gene-PUW35_21335;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=PUW35_21335 CP118132.1 Protein Homology CDS 4413153 4413299 . + 0 ID=cds-WJG92957.1;Parent=gene-PUW35_21335;Dbxref=NCBI_GP:WJG92957.1;Name=WJG92957.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=PUW35_21335;product=lipoprotein toxin entericidin B;protein_id=WJG92957.1;transl_table=11 CP118132.1 Genbank gene 4413330 4413917 . - . ID=gene-PUW35_21340;Name=PUW35_21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21340 CP118132.1 Protein Homology CDS 4413330 4413917 . - 0 ID=cds-WJG92958.1;Parent=gene-PUW35_21340;Dbxref=NCBI_GP:WJG92958.1;Name=WJG92958.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=PUW35_21340;product=LuxR C-terminal-related transcriptional regulator;protein_id=WJG92958.1;transl_table=11 CP118132.1 Genbank gene 4414174 4414491 . + . ID=gene-PUW35_21345;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=PUW35_21345 CP118132.1 Protein Homology CDS 4414174 4414491 . + 0 ID=cds-WJG92959.1;Parent=gene-PUW35_21345;Dbxref=NCBI_GP:WJG92959.1;Name=WJG92959.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=PUW35_21345;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WJG92959.1;transl_table=11 CP118132.1 Genbank gene 4414508 4415041 . - . ID=gene-PUW35_21350;Name=PUW35_21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21350 CP118132.1 Protein Homology CDS 4414508 4415041 . - 0 ID=cds-WJG92960.1;Parent=gene-PUW35_21350;Dbxref=NCBI_GP:WJG92960.1;Name=WJG92960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=PUW35_21350;product=lipocalin family protein;protein_id=WJG92960.1;transl_table=11 CP118132.1 Genbank pseudogene 4415153 4415511 . - . ID=gene-PUW35_21355;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=pseudogene;locus_tag=PUW35_21355;pseudo=true CP118132.1 Protein Homology CDS 4415153 4415511 . - 0 ID=cds-PUW35_21355;Parent=gene-PUW35_21355;Note=frameshifted;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=PUW35_21355;product=fumarate reductase subunit FrdD;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4415522 4415917 . - . ID=gene-PUW35_21360;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=PUW35_21360 CP118132.1 Protein Homology CDS 4415522 4415917 . - 0 ID=cds-WJG92961.1;Parent=gene-PUW35_21360;Dbxref=NCBI_GP:WJG92961.1;Name=WJG92961.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=PUW35_21360;product=fumarate reductase subunit FrdC;protein_id=WJG92961.1;transl_table=11 CP118132.1 Genbank gene 4415928 4416662 . - . ID=gene-PUW35_21365;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=PUW35_21365 CP118132.1 Protein Homology CDS 4415928 4416662 . - 0 ID=cds-WJG92962.1;Parent=gene-PUW35_21365;Dbxref=NCBI_GP:WJG92962.1;Name=WJG92962.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=PUW35_21365;product=fumarate reductase iron-sulfur protein;protein_id=WJG92962.1;transl_table=11 CP118132.1 Genbank pseudogene 4416655 4418444 . - . ID=gene-PUW35_21370;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=pseudogene;locus_tag=PUW35_21370;pseudo=true CP118132.1 Protein Homology CDS 4416655 4418444 . - 0 ID=cds-PUW35_21370;Parent=gene-PUW35_21370;Note=frameshifted;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=PUW35_21370;product=fumarate reductase (quinol) flavoprotein subunit;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4418767 4419744 . + . ID=gene-PUW35_21375;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=PUW35_21375 CP118132.1 Protein Homology CDS 4418767 4419744 . + 0 ID=cds-WJG92963.1;Parent=gene-PUW35_21375;Dbxref=NCBI_GP:WJG92963.1;Name=WJG92963.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=PUW35_21375;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WJG92963.1;transl_table=11 CP118132.1 Genbank gene 4419970 4421472 . + . ID=gene-PUW35_21380;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=PUW35_21380 CP118132.1 Protein Homology CDS 4419970 4421472 . + 0 ID=cds-WJG92964.1;Parent=gene-PUW35_21380;Dbxref=NCBI_GP:WJG92964.1;Name=WJG92964.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=PUW35_21380;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WJG92964.1;transl_table=11 CP118132.1 Genbank gene 4421524 4421838 . + . ID=gene-PUW35_21385;Name=PUW35_21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21385 CP118132.1 Protein Homology CDS 4421524 4421838 . + 0 ID=cds-WJG92965.1;Parent=gene-PUW35_21385;Dbxref=NCBI_GP:WJG92965.1;Name=WJG92965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463210.1;locus_tag=PUW35_21385;product=YjeO family protein;protein_id=WJG92965.1;transl_table=11 CP118132.1 Genbank gene 4421905 4425231 . - . ID=gene-PUW35_21390;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=PUW35_21390 CP118132.1 Protein Homology CDS 4421905 4425231 . - 0 ID=cds-WJG92966.1;Parent=gene-PUW35_21390;Dbxref=NCBI_GP:WJG92966.1;Name=WJG92966.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=PUW35_21390;product=miniconductance mechanosensitive channel MscM;protein_id=WJG92966.1;transl_table=11 CP118132.1 Genbank gene 4425250 4426218 . - . ID=gene-PUW35_21395;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PUW35_21395 CP118132.1 Protein Homology CDS 4425250 4426218 . - 0 ID=cds-WJG92967.1;Parent=gene-PUW35_21395;Dbxref=NCBI_GP:WJG92967.1;Name=WJG92967.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=PUW35_21395;product=archaetidylserine decarboxylase;protein_id=WJG92967.1;transl_table=11 CP118132.1 Genbank gene 4426310 4427362 . - . ID=gene-PUW35_21400;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=PUW35_21400 CP118132.1 Protein Homology CDS 4426310 4427362 . - 0 ID=cds-WJG92968.1;Parent=gene-PUW35_21400;Dbxref=NCBI_GP:WJG92968.1;Name=WJG92968.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=PUW35_21400;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WJG92968.1;transl_table=11 CP118132.1 Genbank gene 4427469 4428014 . + . ID=gene-PUW35_21405;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=PUW35_21405 CP118132.1 Protein Homology CDS 4427469 4428014 . + 0 ID=cds-WJG92969.1;Parent=gene-PUW35_21405;Dbxref=NCBI_GP:WJG92969.1;Name=WJG92969.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=PUW35_21405;product=oligoribonuclease;protein_id=WJG92969.1;transl_table=11 CP118132.1 Genbank gene 4428076 4428816 . - . ID=gene-PUW35_21410;Name=PUW35_21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21410 CP118132.1 Protein Homology CDS 4428076 4428816 . - 0 ID=cds-WJG92970.1;Parent=gene-PUW35_21410;Dbxref=NCBI_GP:WJG92970.1;Name=WJG92970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=PUW35_21410;product=arginine ABC transporter substrate-binding protein;protein_id=WJG92970.1;transl_table=11 CP118132.1 Genbank gene 4429115 4429190 . + . ID=gene-PUW35_21415;Name=PUW35_21415;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_21415 CP118132.1 tRNAscan-SE tRNA 4429115 4429190 . + . ID=rna-PUW35_21415;Parent=gene-PUW35_21415;anticodon=(pos:4429148..4429150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_21415;product=tRNA-Gly CP118132.1 tRNAscan-SE exon 4429115 4429190 . + . ID=exon-PUW35_21415-1;Parent=rna-PUW35_21415;anticodon=(pos:4429148..4429150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_21415;product=tRNA-Gly CP118132.1 Genbank gene 4429347 4429422 . + . ID=gene-PUW35_21420;Name=PUW35_21420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_21420 CP118132.1 tRNAscan-SE tRNA 4429347 4429422 . + . ID=rna-PUW35_21420;Parent=gene-PUW35_21420;anticodon=(pos:4429380..4429382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_21420;product=tRNA-Gly CP118132.1 tRNAscan-SE exon 4429347 4429422 . + . ID=exon-PUW35_21420-1;Parent=rna-PUW35_21420;anticodon=(pos:4429380..4429382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_21420;product=tRNA-Gly CP118132.1 Genbank gene 4429579 4429654 . + . ID=gene-PUW35_21425;Name=PUW35_21425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_21425 CP118132.1 tRNAscan-SE tRNA 4429579 4429654 . + . ID=rna-PUW35_21425;Parent=gene-PUW35_21425;anticodon=(pos:4429612..4429614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_21425;product=tRNA-Gly CP118132.1 tRNAscan-SE exon 4429579 4429654 . + . ID=exon-PUW35_21425-1;Parent=rna-PUW35_21425;anticodon=(pos:4429612..4429614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_21425;product=tRNA-Gly CP118132.1 Genbank gene 4429924 4431063 . - . ID=gene-PUW35_21430;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=PUW35_21430 CP118132.1 Protein Homology CDS 4429924 4431063 . - 0 ID=cds-WJG92971.1;Parent=gene-PUW35_21430;Dbxref=NCBI_GP:WJG92971.1;Name=WJG92971.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=PUW35_21430;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WJG92971.1;transl_table=11 CP118132.1 Genbank pseudogene 4431062 4432608 . + . ID=gene-PUW35_21435;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=pseudogene;locus_tag=PUW35_21435;pseudo=true CP118132.1 Protein Homology CDS 4431062 4432608 . + 0 ID=cds-PUW35_21435;Parent=gene-PUW35_21435;Note=frameshifted;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=PUW35_21435;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4432580 4433041 . + . ID=gene-PUW35_21440;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=PUW35_21440 CP118132.1 Protein Homology CDS 4432580 4433041 . + 0 ID=cds-WJG92972.1;Parent=gene-PUW35_21440;Dbxref=NCBI_GP:WJG92972.1;Name=WJG92972.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=PUW35_21440;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WJG92972.1;transl_table=11 CP118132.1 Genbank gene 4433058 4434377 . + . ID=gene-PUW35_21445;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=PUW35_21445 CP118132.1 Protein Homology CDS 4433058 4434377 . + 0 ID=cds-WJG92973.1;Parent=gene-PUW35_21445;Dbxref=NCBI_GP:WJG92973.1;Name=WJG92973.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=PUW35_21445;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WJG92973.1;transl_table=11 CP118132.1 Genbank gene 4434387 4436243 . + . ID=gene-PUW35_21450;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=PUW35_21450 CP118132.1 Protein Homology CDS 4434387 4436243 . + 0 ID=cds-WJG92974.1;Parent=gene-PUW35_21450;Dbxref=NCBI_GP:WJG92974.1;Name=WJG92974.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=PUW35_21450;product=DNA mismatch repair endonuclease MutL;protein_id=WJG92974.1;transl_table=11 CP118132.1 Genbank gene 4436236 4437186 . + . ID=gene-PUW35_21455;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=PUW35_21455 CP118132.1 Protein Homology CDS 4436236 4437186 . + 0 ID=cds-WJG92975.1;Parent=gene-PUW35_21455;Dbxref=NCBI_GP:WJG92975.1;Name=WJG92975.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=PUW35_21455;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WJG92975.1;transl_table=11 CP118132.1 Genbank gene 4437269 4437577 . + . ID=gene-PUW35_21460;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=PUW35_21460 CP118132.1 Protein Homology CDS 4437269 4437577 . + 0 ID=cds-WJG92976.1;Parent=gene-PUW35_21460;Dbxref=NCBI_GP:WJG92976.1;Name=WJG92976.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=PUW35_21460;product=RNA chaperone Hfq;protein_id=WJG92976.1;transl_table=11 CP118132.1 Genbank gene 4437649 4438929 . + . ID=gene-PUW35_21465;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PUW35_21465 CP118132.1 Protein Homology CDS 4437649 4438929 . + 0 ID=cds-WJG92977.1;Parent=gene-PUW35_21465;Dbxref=NCBI_GP:WJG92977.1;Name=WJG92977.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=PUW35_21465;product=GTPase HflX;protein_id=WJG92977.1;transl_table=11 CP118132.1 Genbank gene 4439144 4440403 . + . ID=gene-PUW35_21470;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=PUW35_21470 CP118132.1 Protein Homology CDS 4439144 4440403 . + 0 ID=cds-WJG92978.1;Parent=gene-PUW35_21470;Dbxref=NCBI_GP:WJG92978.1;Name=WJG92978.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=PUW35_21470;product=FtsH protease activity modulator HflK;protein_id=WJG92978.1;transl_table=11 CP118132.1 Genbank gene 4440406 4441410 . + . ID=gene-PUW35_21475;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=PUW35_21475 CP118132.1 Protein Homology CDS 4440406 4441410 . + 0 ID=cds-WJG92979.1;Parent=gene-PUW35_21475;Dbxref=NCBI_GP:WJG92979.1;Name=WJG92979.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=PUW35_21475;product=protease modulator HflC;protein_id=WJG92979.1;transl_table=11 CP118132.1 Genbank gene 4441489 4441686 . + . ID=gene-PUW35_21480;Name=PUW35_21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21480 CP118132.1 Protein Homology CDS 4441489 4441686 . + 0 ID=cds-WJG92980.1;Parent=gene-PUW35_21480;Dbxref=NCBI_GP:WJG92980.1;Name=WJG92980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=PUW35_21480;product=DUF2065 family protein;protein_id=WJG92980.1;transl_table=11 CP118132.1 Genbank gene 4441789 4443087 . + . ID=gene-PUW35_21485;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=PUW35_21485 CP118132.1 Protein Homology CDS 4441789 4443087 . + 0 ID=cds-WJG92981.1;Parent=gene-PUW35_21485;Dbxref=NCBI_GP:WJG92981.1;Name=WJG92981.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=PUW35_21485;product=adenylosuccinate synthase;protein_id=WJG92981.1;transl_table=11 CP118132.1 Genbank gene 4443295 4443720 . + . ID=gene-PUW35_21490;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=PUW35_21490 CP118132.1 Protein Homology CDS 4443295 4443720 . + 0 ID=cds-WJG92982.1;Parent=gene-PUW35_21490;Dbxref=NCBI_GP:WJG92982.1;Name=WJG92982.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=PUW35_21490;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WJG92982.1;transl_table=11 CP118132.1 Genbank gene 4443758 4446196 . + . ID=gene-PUW35_21495;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=PUW35_21495 CP118132.1 Protein Homology CDS 4443758 4446196 . + 0 ID=cds-WJG92983.1;Parent=gene-PUW35_21495;Dbxref=NCBI_GP:WJG92983.1;Name=WJG92983.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=PUW35_21495;product=ribonuclease R;protein_id=WJG92983.1;transl_table=11 CP118132.1 Genbank gene 4446287 4447018 . + . ID=gene-PUW35_21500;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=PUW35_21500 CP118132.1 Protein Homology CDS 4446287 4447018 . + 0 ID=cds-WJG92984.1;Parent=gene-PUW35_21500;Dbxref=NCBI_GP:WJG92984.1;Name=WJG92984.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=PUW35_21500;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WJG92984.1;transl_table=11 CP118132.1 Genbank gene 4447150 4447554 . + . ID=gene-PUW35_21505;Name=PUW35_21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21505 CP118132.1 Protein Homology CDS 4447150 4447554 . + 0 ID=cds-WJG92985.1;Parent=gene-PUW35_21505;Dbxref=NCBI_GP:WJG92985.1;Name=WJG92985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=PUW35_21505;product=DUF2170 family protein;protein_id=WJG92985.1;transl_table=11 CP118132.1 Genbank gene 4447569 4448267 . + . ID=gene-PUW35_21510;Name=PUW35_21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21510 CP118132.1 Protein Homology CDS 4447569 4448267 . + 0 ID=cds-WJG92986.1;Parent=gene-PUW35_21510;Dbxref=NCBI_GP:WJG92986.1;Name=WJG92986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=PUW35_21510;product=PspA/IM30 family protein;protein_id=WJG92986.1;transl_table=11 CP118132.1 Genbank gene 4448267 4449337 . + . ID=gene-PUW35_21515;Name=PUW35_21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21515 CP118132.1 Protein Homology CDS 4448267 4449337 . + 0 ID=cds-WJG92987.1;Parent=gene-PUW35_21515;Dbxref=NCBI_GP:WJG92987.1;Name=WJG92987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=PUW35_21515;product=ion channel;protein_id=WJG92987.1;transl_table=11 CP118132.1 Genbank gene 4449310 4449993 . + . ID=gene-PUW35_21520;Name=PUW35_21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21520 CP118132.1 Protein Homology CDS 4449310 4449993 . + 0 ID=cds-WJG92988.1;Parent=gene-PUW35_21520;Dbxref=NCBI_GP:WJG92988.1;Name=WJG92988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=PUW35_21520;product=YjfK family protein;protein_id=WJG92988.1;transl_table=11 CP118132.1 Genbank pseudogene 4450011 4450408 . + . ID=gene-PUW35_21525;Name=PUW35_21525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21525;pseudo=true CP118132.1 Protein Homology CDS 4450011 4450408 . + 0 ID=cds-PUW35_21525;Parent=gene-PUW35_21525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=PUW35_21525;product=DUF350 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4450418 4451056 . + . ID=gene-PUW35_21530;Name=PUW35_21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21530 CP118132.1 Protein Homology CDS 4450418 4451056 . + 0 ID=cds-WJG92989.1;Parent=gene-PUW35_21530;Dbxref=NCBI_GP:WJG92989.1;Name=WJG92989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=PUW35_21530;product=DUF1190 domain-containing protein;protein_id=WJG92989.1;transl_table=11 CP118132.1 Genbank gene 4451059 4452222 . + . ID=gene-PUW35_21535;Name=PUW35_21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21535 CP118132.1 Protein Homology CDS 4451059 4452222 . + 0 ID=cds-WJG92990.1;Parent=gene-PUW35_21535;Dbxref=NCBI_GP:WJG92990.1;Name=WJG92990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=PUW35_21535;product=glutathionylspermidine synthase family protein;protein_id=WJG92990.1;transl_table=11 CP118132.1 Genbank gene 4452307 4453914 . + . ID=gene-PUW35_21540;Name=PUW35_21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21540 CP118132.1 Protein Homology CDS 4452307 4453914 . + 0 ID=cds-WJG92991.1;Parent=gene-PUW35_21540;Dbxref=NCBI_GP:WJG92991.1;Name=WJG92991.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=PUW35_21540;product=isovaleryl-CoA dehydrogenase;protein_id=WJG92991.1;transl_table=11 CP118132.1 Genbank gene 4453959 4454234 . - . ID=gene-PUW35_21545;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=PUW35_21545 CP118132.1 Protein Homology CDS 4453959 4454234 . - 0 ID=cds-WJG92992.1;Parent=gene-PUW35_21545;Dbxref=NCBI_GP:WJG92992.1;Name=WJG92992.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=PUW35_21545;product=DUF1471 family protease activator YjfN;protein_id=WJG92992.1;transl_table=11 CP118132.1 Genbank gene 4454365 4454694 . - . ID=gene-PUW35_21550;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=PUW35_21550 CP118132.1 Protein Homology CDS 4454365 4454694 . - 0 ID=cds-WJG92993.1;Parent=gene-PUW35_21550;Dbxref=NCBI_GP:WJG92993.1;Name=WJG92993.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=PUW35_21550;product=biofilm peroxide resistance protein BsmA;protein_id=WJG92993.1;transl_table=11 CP118132.1 Genbank gene 4454878 4455420 . + . ID=gene-PUW35_21555;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=PUW35_21555 CP118132.1 Protein Homology CDS 4454878 4455420 . + 0 ID=cds-WJG92994.1;Parent=gene-PUW35_21555;Dbxref=NCBI_GP:WJG92994.1;Name=WJG92994.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF007857.0;locus_tag=PUW35_21555;product=esterase;protein_id=WJG92994.1;transl_table=11 CP118132.1 Genbank gene 4455471 4455626 . + . ID=gene-PUW35_21560;Name=PUW35_21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21560 CP118132.1 Protein Homology CDS 4455471 4455626 . + 0 ID=cds-WJG92995.1;Parent=gene-PUW35_21560;Dbxref=NCBI_GP:WJG92995.1;Name=WJG92995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012546.2;locus_tag=PUW35_21560;product=hypothetical protein;protein_id=WJG92995.1;transl_table=11 CP118132.1 Genbank gene 4455623 4456378 . - . ID=gene-PUW35_21565;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=PUW35_21565 CP118132.1 Protein Homology CDS 4455623 4456378 . - 0 ID=cds-WJG92996.1;Parent=gene-PUW35_21565;Dbxref=NCBI_GP:WJG92996.1;Name=WJG92996.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=PUW35_21565;product=HTH-type transcriptional regulator UlaR;protein_id=WJG92996.1;transl_table=11 CP118132.1 Genbank gene 4456483 4457547 . - . ID=gene-PUW35_21570;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=PUW35_21570 CP118132.1 Protein Homology CDS 4456483 4457547 . - 0 ID=cds-WJG92997.1;Parent=gene-PUW35_21570;Dbxref=NCBI_GP:WJG92997.1;Name=WJG92997.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=PUW35_21570;product=L-ascorbate 6-phosphate lactonase;protein_id=WJG92997.1;transl_table=11 CP118132.1 Genbank gene 4457910 4459307 . + . ID=gene-PUW35_21575;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=PUW35_21575 CP118132.1 Protein Homology CDS 4457910 4459307 . + 0 ID=cds-WJG92998.1;Parent=gene-PUW35_21575;Dbxref=NCBI_GP:WJG92998.1;Name=WJG92998.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=PUW35_21575;product=PTS ascorbate transporter subunit IIC;protein_id=WJG92998.1;transl_table=11 CP118132.1 Genbank gene 4459323 4459628 . + . ID=gene-PUW35_21580;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=PUW35_21580 CP118132.1 Protein Homology CDS 4459323 4459628 . + 0 ID=cds-WJG92999.1;Parent=gene-PUW35_21580;Dbxref=NCBI_GP:WJG92999.1;Name=WJG92999.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=PUW35_21580;product=PTS ascorbate transporter subunit IIB;protein_id=WJG92999.1;transl_table=11 CP118132.1 Genbank gene 4459638 4460102 . + . ID=gene-PUW35_21585;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=PUW35_21585 CP118132.1 Protein Homology CDS 4459638 4460102 . + 0 ID=cds-WJG93000.1;Parent=gene-PUW35_21585;Dbxref=NCBI_GP:WJG93000.1;Name=WJG93000.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=PUW35_21585;product=PTS ascorbate transporter subunit IIA;protein_id=WJG93000.1;transl_table=11 CP118132.1 Genbank gene 4460116 4460766 . + . ID=gene-PUW35_21590;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PUW35_21590 CP118132.1 Protein Homology CDS 4460116 4460766 . + 0 ID=cds-WJG93001.1;Parent=gene-PUW35_21590;Dbxref=NCBI_GP:WJG93001.1;Name=WJG93001.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=PUW35_21590;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WJG93001.1;transl_table=11 CP118132.1 Genbank gene 4460776 4461630 . + . ID=gene-PUW35_21595;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=PUW35_21595 CP118132.1 Protein Homology CDS 4460776 4461630 . + 0 ID=cds-WJG93002.1;Parent=gene-PUW35_21595;Dbxref=NCBI_GP:WJG93002.1;Name=WJG93002.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=PUW35_21595;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WJG93002.1;transl_table=11 CP118132.1 Genbank gene 4461630 4462316 . + . ID=gene-PUW35_21600;Name=PUW35_21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21600 CP118132.1 Protein Homology CDS 4461630 4462316 . + 0 ID=cds-WJG93003.1;Parent=gene-PUW35_21600;Dbxref=NCBI_GP:WJG93003.1;Name=WJG93003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=PUW35_21600;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJG93003.1;transl_table=11 CP118132.1 Genbank gene 4462445 4462720 . - . ID=gene-PUW35_21605;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=PUW35_21605 CP118132.1 Protein Homology CDS 4462445 4462720 . - 0 ID=cds-WJG95169.1;Parent=gene-PUW35_21605;Dbxref=NCBI_GP:WJG95169.1;Name=WJG95169.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463250.1;locus_tag=PUW35_21605;product=DUF1471 family protein YjfY;protein_id=WJG95169.1;transl_table=11 CP118132.1 Genbank pseudogene 4462914 4463119 . + . ID=gene-PUW35_21610;Name=PUW35_21610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21610;pseudo=true CP118132.1 Protein Homology CDS 4462914 4463119 . + 0 ID=cds-PUW35_21610;Parent=gene-PUW35_21610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=PUW35_21610;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4463190 4463585 . + . ID=gene-PUW35_21615;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=PUW35_21615 CP118132.1 Protein Homology CDS 4463190 4463585 . + 0 ID=cds-WJG93004.1;Parent=gene-PUW35_21615;Dbxref=NCBI_GP:WJG93004.1;Name=WJG93004.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=PUW35_21615;product=30S ribosomal protein S6;protein_id=WJG93004.1;transl_table=11 CP118132.1 Genbank gene 4463592 4463906 . + . ID=gene-PUW35_21620;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=PUW35_21620 CP118132.1 Protein Homology CDS 4463592 4463906 . + 0 ID=cds-WJG93005.1;Parent=gene-PUW35_21620;Dbxref=NCBI_GP:WJG93005.1;Name=WJG93005.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=PUW35_21620;product=primosomal replication protein N;protein_id=WJG93005.1;transl_table=11 CP118132.1 Genbank gene 4463911 4464138 . + . ID=gene-PUW35_21625;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=PUW35_21625 CP118132.1 Protein Homology CDS 4463911 4464138 . + 0 ID=cds-WJG93006.1;Parent=gene-PUW35_21625;Dbxref=NCBI_GP:WJG93006.1;Name=WJG93006.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=PUW35_21625;product=30S ribosomal protein S18;protein_id=WJG93006.1;transl_table=11 CP118132.1 Genbank gene 4464180 4464629 . + . ID=gene-PUW35_21630;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=PUW35_21630 CP118132.1 Protein Homology CDS 4464180 4464629 . + 0 ID=cds-WJG93007.1;Parent=gene-PUW35_21630;Dbxref=NCBI_GP:WJG93007.1;Name=WJG93007.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=PUW35_21630;product=50S ribosomal protein L9;protein_id=WJG93007.1;transl_table=11 CP118132.1 Genbank pseudogene 4464777 4465702 . + . ID=gene-PUW35_21635;Name=PUW35_21635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21635;pseudo=true CP118132.1 Protein Homology CDS 4464777 4465702 . + 0 ID=cds-PUW35_21635;Parent=gene-PUW35_21635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=PUW35_21635;product=DMT family transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4465752 4466387 . - . ID=gene-PUW35_21640;Name=PUW35_21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21640 CP118132.1 Protein Homology CDS 4465752 4466387 . - 0 ID=cds-WJG93008.1;Parent=gene-PUW35_21640;Dbxref=NCBI_GP:WJG93008.1;Name=WJG93008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=PUW35_21640;product=OapA family protein;protein_id=WJG93008.1;transl_table=11 CP118132.1 Genbank gene 4466607 4467227 . + . ID=gene-PUW35_21645;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=PUW35_21645 CP118132.1 Protein Homology CDS 4466607 4467227 . + 0 ID=cds-WJG93009.1;Parent=gene-PUW35_21645;Dbxref=NCBI_GP:WJG93009.1;Name=WJG93009.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=PUW35_21645;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJG93009.1;transl_table=11 CP118132.1 Genbank gene 4467523 4468926 . + . ID=gene-PUW35_21650;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=PUW35_21650 CP118132.1 Protein Homology CDS 4467523 4468926 . + 0 ID=cds-WJG93010.1;Parent=gene-PUW35_21650;Dbxref=NCBI_GP:WJG93010.1;Name=WJG93010.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541380.1;locus_tag=PUW35_21650;product=D-serine/D-alanine/glycine transporter;protein_id=WJG93010.1;transl_table=11 CP118132.1 Genbank gene 4469264 4470403 . + . ID=gene-PUW35_21655;Name=PUW35_21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21655 CP118132.1 Protein Homology CDS 4469264 4470403 . + 0 ID=cds-WJG93011.1;Parent=gene-PUW35_21655;Dbxref=NCBI_GP:WJG93011.1;Name=WJG93011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155541.1;locus_tag=PUW35_21655;product=DKNYY domain-containing protein;protein_id=WJG93011.1;transl_table=11 CP118132.1 Genbank gene 4470418 4471806 . + . ID=gene-PUW35_21660;Name=PUW35_21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21660 CP118132.1 Protein Homology CDS 4470418 4471806 . + 0 ID=cds-WJG93012.1;Parent=gene-PUW35_21660;Dbxref=NCBI_GP:WJG93012.1;Name=WJG93012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944334.1;locus_tag=PUW35_21660;product=hypothetical protein;protein_id=WJG93012.1;transl_table=11 CP118132.1 Genbank gene 4471873 4472535 . - . ID=gene-PUW35_21665;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=PUW35_21665 CP118132.1 Protein Homology CDS 4471873 4472535 . - 0 ID=cds-WJG93013.1;Parent=gene-PUW35_21665;Dbxref=NCBI_GP:WJG93013.1;Name=WJG93013.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=PUW35_21665;product=iron-sulfur cluster repair protein YtfE;protein_id=WJG93013.1;transl_table=11 CP118132.1 Genbank pseudogene 4472638 4473602 . - . ID=gene-PUW35_21670;Name=PUW35_21670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21670;pseudo=true CP118132.1 Protein Homology CDS 4472638 4473602 . - 0 ID=cds-PUW35_21670;Parent=gene-PUW35_21670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=PUW35_21670;product=DMT family transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4473683 4474531 . - . ID=gene-PUW35_21675;Name=PUW35_21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21675 CP118132.1 Protein Homology CDS 4473683 4474531 . - 0 ID=cds-WJG93014.1;Parent=gene-PUW35_21675;Dbxref=NCBI_GP:WJG93014.1;Name=WJG93014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=PUW35_21675;product=SDR family oxidoreductase;protein_id=WJG93014.1;transl_table=11 CP118132.1 Genbank gene 4474619 4475005 . + . ID=gene-PUW35_21680;Name=PUW35_21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21680 CP118132.1 Protein Homology CDS 4474619 4475005 . + 0 ID=cds-WJG93015.1;Parent=gene-PUW35_21680;Dbxref=NCBI_GP:WJG93015.1;Name=WJG93015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=PUW35_21680;product=helix-turn-helix domain-containing protein;protein_id=WJG93015.1;transl_table=11 CP118132.1 Genbank gene 4475063 4477006 . - . ID=gene-PUW35_21685;Name=PUW35_21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21685 CP118132.1 Protein Homology CDS 4475063 4477006 . - 0 ID=cds-WJG93016.1;Parent=gene-PUW35_21685;Dbxref=NCBI_GP:WJG93016.1;Name=WJG93016.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=PUW35_21685;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WJG93016.1;transl_table=11 CP118132.1 Genbank gene 4477274 4478014 . + . ID=gene-PUW35_21690;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=PUW35_21690 CP118132.1 Protein Homology CDS 4477274 4478014 . + 0 ID=cds-WJG93017.1;Parent=gene-PUW35_21690;Dbxref=NCBI_GP:WJG93017.1;Name=WJG93017.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=PUW35_21690;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WJG93017.1;transl_table=11 CP118132.1 Genbank gene 4478004 4478561 . - . ID=gene-PUW35_21695;Name=PUW35_21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21695 CP118132.1 Protein Homology CDS 4478004 4478561 . - 0 ID=cds-WJG93018.1;Parent=gene-PUW35_21695;Dbxref=NCBI_GP:WJG93018.1;Name=WJG93018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=PUW35_21695;product=YtfJ family protein;protein_id=WJG93018.1;transl_table=11 CP118132.1 Genbank gene 4478887 4479093 . + . ID=gene-PUW35_21700;Name=PUW35_21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21700 CP118132.1 Protein Homology CDS 4478887 4479093 . + 0 ID=cds-WJG93019.1;Parent=gene-PUW35_21700;Dbxref=NCBI_GP:WJG93019.1;Name=WJG93019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=PUW35_21700;product=DUF1107 domain-containing protein;protein_id=WJG93019.1;transl_table=11 CP118132.1 Genbank gene 4479178 4480521 . - . ID=gene-PUW35_21705;Name=PUW35_21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21705 CP118132.1 Protein Homology CDS 4479178 4480521 . - 0 ID=cds-WJG93020.1;Parent=gene-PUW35_21705;Dbxref=NCBI_GP:WJG93020.1;Name=WJG93020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=PUW35_21705;product=hemolysin family protein;protein_id=WJG93020.1;transl_table=11 CP118132.1 Genbank gene 4480704 4481342 . - . ID=gene-PUW35_21710;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=PUW35_21710 CP118132.1 Protein Homology CDS 4480704 4481342 . - 0 ID=cds-WJG93021.1;Parent=gene-PUW35_21710;Dbxref=NCBI_GP:WJG93021.1;Name=WJG93021.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=PUW35_21710;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WJG93021.1;transl_table=11 CP118132.1 Genbank gene 4481555 4483288 . + . ID=gene-PUW35_21715;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=PUW35_21715 CP118132.1 Protein Homology CDS 4481555 4483288 . + 0 ID=cds-WJG93022.1;Parent=gene-PUW35_21715;Dbxref=NCBI_GP:WJG93022.1;Name=WJG93022.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=PUW35_21715;product=autotransporter assembly complex protein TamA;protein_id=WJG93022.1;transl_table=11 CP118132.1 Genbank gene 4483285 4487064 . + . ID=gene-PUW35_21720;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=PUW35_21720 CP118132.1 Protein Homology CDS 4483285 4487064 . + 0 ID=cds-WJG93023.1;Parent=gene-PUW35_21720;Dbxref=NCBI_GP:WJG93023.1;Name=WJG93023.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=PUW35_21720;product=autotransporter assembly complex protein TamB;protein_id=WJG93023.1;transl_table=11 CP118132.1 Genbank gene 4487067 4487411 . + . ID=gene-PUW35_21725;Name=PUW35_21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21725 CP118132.1 Protein Homology CDS 4487067 4487411 . + 0 ID=cds-WJG93024.1;Parent=gene-PUW35_21725;Dbxref=NCBI_GP:WJG93024.1;Name=WJG93024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=PUW35_21725;product=gamma-glutamylcyclotransferase;protein_id=WJG93024.1;transl_table=11 CP118132.1 Genbank gene 4487465 4488670 . - . ID=gene-PUW35_21730;Name=PUW35_21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21730 CP118132.1 Protein Homology CDS 4487465 4488670 . - 0 ID=cds-WJG93025.1;Parent=gene-PUW35_21730;Dbxref=NCBI_GP:WJG93025.1;Name=WJG93025.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=PUW35_21730;product=MFS transporter;protein_id=WJG93025.1;transl_table=11 CP118132.1 Genbank pseudogene 4488667 4489830 . - . ID=gene-PUW35_21735;Name=PUW35_21735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21735;pseudo=true CP118132.1 Protein Homology CDS 4488667 4489830 . - 0 ID=cds-PUW35_21735;Parent=gene-PUW35_21735;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=PUW35_21735;product=metallo-dependent hydrolase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4490240 4490770 . - . ID=gene-PUW35_21740;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=PUW35_21740 CP118132.1 Protein Homology CDS 4490240 4490770 . - 0 ID=cds-WJG93026.1;Parent=gene-PUW35_21740;Dbxref=NCBI_GP:WJG93026.1;Name=WJG93026.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=PUW35_21740;product=inorganic diphosphatase;protein_id=WJG93026.1;transl_table=11 CP118132.1 Genbank gene 4490997 4491995 . - . ID=gene-PUW35_21745;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=PUW35_21745 CP118132.1 Protein Homology CDS 4490997 4491995 . - 0 ID=cds-WJG93027.1;Parent=gene-PUW35_21745;Dbxref=NCBI_GP:WJG93027.1;Name=WJG93027.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=PUW35_21745;product=class 1 fructose-bisphosphatase;protein_id=WJG93027.1;transl_table=11 CP118132.1 Genbank gene 4492170 4493543 . + . ID=gene-PUW35_21750;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=PUW35_21750 CP118132.1 Protein Homology CDS 4492170 4493543 . + 0 ID=cds-WJG93028.1;Parent=gene-PUW35_21750;Dbxref=NCBI_GP:WJG93028.1;Name=WJG93028.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=PUW35_21750;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WJG93028.1;transl_table=11 CP118132.1 Genbank gene 4493650 4494201 . - . ID=gene-PUW35_21755;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=PUW35_21755 CP118132.1 Protein Homology CDS 4493650 4494201 . - 0 ID=cds-WJG93029.1;Parent=gene-PUW35_21755;Dbxref=NCBI_GP:WJG93029.1;Name=WJG93029.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=PUW35_21755;product=ribosome biogenesis factor YjgA;protein_id=WJG93029.1;transl_table=11 CP118132.1 Genbank gene 4494297 4495649 . + . ID=gene-PUW35_21760;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=PUW35_21760 CP118132.1 Protein Homology CDS 4494297 4495649 . + 0 ID=cds-WJG93030.1;Parent=gene-PUW35_21760;Dbxref=NCBI_GP:WJG93030.1;Name=WJG93030.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=PUW35_21760;product=metalloprotease PmbA;protein_id=WJG93030.1;transl_table=11 CP118132.1 Genbank gene 4495748 4496134 . + . ID=gene-PUW35_21765;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=PUW35_21765 CP118132.1 Protein Homology CDS 4495748 4496134 . + 0 ID=cds-WJG93031.1;Parent=gene-PUW35_21765;Dbxref=NCBI_GP:WJG93031.1;Name=WJG93031.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=PUW35_21765;product=cytochrome b562;protein_id=WJG93031.1;transl_table=11 CP118132.1 Genbank gene 4496412 4496750 . + . ID=gene-PUW35_21770;Name=PUW35_21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21770 CP118132.1 Protein Homology CDS 4496412 4496750 . + 0 ID=cds-WJG93032.1;Parent=gene-PUW35_21770;Dbxref=NCBI_GP:WJG93032.1;Name=WJG93032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=PUW35_21770;product=glycine dehydrogenase;protein_id=WJG93032.1;transl_table=11 CP118132.1 Genbank gene 4496761 4497123 . + . ID=gene-PUW35_21775;Name=PUW35_21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21775 CP118132.1 Protein Homology CDS 4496761 4497123 . + 0 ID=cds-WJG93033.1;Parent=gene-PUW35_21775;Dbxref=NCBI_GP:WJG93033.1;Name=WJG93033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=PUW35_21775;product=SFCGS family glycine-rich protein;protein_id=WJG93033.1;transl_table=11 CP118132.1 Genbank gene 4497123 4497425 . + . ID=gene-PUW35_21780;Name=PUW35_21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21780 CP118132.1 Protein Homology CDS 4497123 4497425 . + 0 ID=cds-WJG93034.1;Parent=gene-PUW35_21780;Dbxref=NCBI_GP:WJG93034.1;Name=WJG93034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=PUW35_21780;product=DUF4312 family protein;protein_id=WJG93034.1;transl_table=11 CP118132.1 Genbank pseudogene 4497448 4498223 . + . ID=gene-PUW35_21785;Name=PUW35_21785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21785;pseudo=true CP118132.1 Protein Homology CDS 4497448 4498223 . + 0 ID=cds-PUW35_21785;Parent=gene-PUW35_21785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=PUW35_21785;product=DUF4311 domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4498235 4498879 . + . ID=gene-PUW35_21790;Name=PUW35_21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21790 CP118132.1 Protein Homology CDS 4498235 4498879 . + 0 ID=cds-WJG93035.1;Parent=gene-PUW35_21790;Dbxref=NCBI_GP:WJG93035.1;Name=WJG93035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=PUW35_21790;product=DUF4310 family protein;protein_id=WJG93035.1;transl_table=11 CP118132.1 Genbank gene 4498938 4500071 . + . ID=gene-PUW35_21795;Name=PUW35_21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21795 CP118132.1 Protein Homology CDS 4498938 4500071 . + 0 ID=cds-WJG93036.1;Parent=gene-PUW35_21795;Dbxref=NCBI_GP:WJG93036.1;Name=WJG93036.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=PUW35_21795;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WJG93036.1;transl_table=11 CP118132.1 Genbank gene 4500055 4501173 . + . ID=gene-PUW35_21800;Name=PUW35_21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21800 CP118132.1 Protein Homology CDS 4500055 4501173 . + 0 ID=cds-WJG93037.1;Parent=gene-PUW35_21800;Dbxref=NCBI_GP:WJG93037.1;Name=WJG93037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=PUW35_21800;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WJG93037.1;transl_table=11 CP118132.1 Genbank pseudogene 4501170 4501910 . + . ID=gene-PUW35_21805;Name=PUW35_21805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21805;pseudo=true CP118132.1 Protein Homology CDS 4501170 4501910 . + 0 ID=cds-PUW35_21805;Parent=gene-PUW35_21805;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=PUW35_21805;product=KDGP aldolase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4501927 4503840 . + . ID=gene-PUW35_21810;Name=PUW35_21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21810 CP118132.1 Protein Homology CDS 4501927 4503840 . + 0 ID=cds-WJG93038.1;Parent=gene-PUW35_21810;Dbxref=NCBI_GP:WJG93038.1;Name=WJG93038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=PUW35_21810;product=BglG family transcription antiterminator;protein_id=WJG93038.1;transl_table=11 CP118132.1 Genbank gene 4503918 4504160 . + . ID=gene-PUW35_21815;Name=PUW35_21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21815 CP118132.1 Protein Homology CDS 4503918 4504160 . + 0 ID=cds-WJG93039.1;Parent=gene-PUW35_21815;Dbxref=NCBI_GP:WJG93039.1;Name=WJG93039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=PUW35_21815;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WJG93039.1;transl_table=11 CP118132.1 Genbank gene 4504150 4504434 . + . ID=gene-PUW35_21820;Name=PUW35_21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21820 CP118132.1 Protein Homology CDS 4504150 4504434 . + 0 ID=cds-WJG93040.1;Parent=gene-PUW35_21820;Dbxref=NCBI_GP:WJG93040.1;Name=WJG93040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=PUW35_21820;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJG93040.1;transl_table=11 CP118132.1 Genbank gene 4504438 4504902 . - . ID=gene-PUW35_21825;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=PUW35_21825 CP118132.1 Protein Homology CDS 4504438 4504902 . - 0 ID=cds-WJG93041.1;Parent=gene-PUW35_21825;Dbxref=NCBI_GP:WJG93041.1;Name=WJG93041.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=PUW35_21825;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WJG93041.1;transl_table=11 CP118132.1 Genbank gene 4505024 4507162 . - . ID=gene-PUW35_21830;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=PUW35_21830 CP118132.1 Protein Homology CDS 4505024 4507162 . - 0 ID=cds-WJG93042.1;Parent=gene-PUW35_21830;Dbxref=NCBI_GP:WJG93042.1;Name=WJG93042.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=PUW35_21830;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WJG93042.1;transl_table=11 CP118132.1 Genbank pseudogene 4507571 4509219 . - . ID=gene-PUW35_21835;Name=treC;gbkey=Gene;gene=treC;gene_biotype=pseudogene;locus_tag=PUW35_21835;pseudo=true CP118132.1 Protein Homology CDS 4507571 4509219 . - 0 ID=cds-PUW35_21835;Parent=gene-PUW35_21835;Note=frameshifted;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=PUW35_21835;product=alpha%2Calpha-phosphotrehalase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4509269 4510687 . - . ID=gene-PUW35_21840;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=PUW35_21840 CP118132.1 Protein Homology CDS 4509269 4510687 . - 0 ID=cds-WJG93043.1;Parent=gene-PUW35_21840;Dbxref=NCBI_GP:WJG93043.1;Name=WJG93043.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=PUW35_21840;product=PTS trehalose transporter subunit IIBC;protein_id=WJG93043.1;transl_table=11 CP118132.1 Genbank gene 4510825 4511772 . - . ID=gene-PUW35_21845;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=PUW35_21845 CP118132.1 Protein Homology CDS 4510825 4511772 . - 0 ID=cds-WJG93044.1;Parent=gene-PUW35_21845;Dbxref=NCBI_GP:WJG93044.1;Name=WJG93044.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=PUW35_21845;product=trehalose operon repressor TreR;protein_id=WJG93044.1;transl_table=11 CP118132.1 Genbank gene 4512156 4514864 . + . ID=gene-PUW35_21850;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PUW35_21850 CP118132.1 Protein Homology CDS 4512156 4514864 . + 0 ID=cds-WJG95170.1;Parent=gene-PUW35_21850;Dbxref=NCBI_GP:WJG95170.1;Name=WJG95170.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=PUW35_21850;product=magnesium-translocating P-type ATPase;protein_id=WJG95170.1;transl_table=11 CP118132.1 Genbank pseudogene 4514980 4515426 . - . ID=gene-PUW35_21855;Name=PUW35_21855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21855;pseudo=true CP118132.1 Protein Homology CDS 4514980 4515426 . - 0 ID=cds-PUW35_21855;Parent=gene-PUW35_21855;Note=internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=PUW35_21855;product=transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4515501 4515887 . - . ID=gene-PUW35_21860;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=PUW35_21860 CP118132.1 Protein Homology CDS 4515501 4515887 . - 0 ID=cds-WJG93045.1;Parent=gene-PUW35_21860;Dbxref=NCBI_GP:WJG93045.1;Name=WJG93045.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=PUW35_21860;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WJG93045.1;transl_table=11 CP118132.1 Genbank gene 4515964 4516425 . - . ID=gene-PUW35_21865;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=PUW35_21865 CP118132.1 Protein Homology CDS 4515964 4516425 . - 0 ID=cds-WJG93046.1;Parent=gene-PUW35_21865;Dbxref=NCBI_GP:WJG93046.1;Name=WJG93046.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=PUW35_21865;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WJG93046.1;transl_table=11 CP118132.1 Genbank gene 4516438 4517373 . - . ID=gene-PUW35_21870;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=PUW35_21870 CP118132.1 Protein Homology CDS 4516438 4517373 . - 0 ID=cds-WJG93047.1;Parent=gene-PUW35_21870;Dbxref=NCBI_GP:WJG93047.1;Name=WJG93047.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=PUW35_21870;product=aspartate carbamoyltransferase;protein_id=WJG93047.1;transl_table=11 CP118132.1 Genbank gene 4517376 4517501 . - . ID=gene-PUW35_21875;Name=PUW35_21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21875 CP118132.1 Protein Homology CDS 4517376 4517501 . - 0 ID=cds-WJG93048.1;Parent=gene-PUW35_21875;Dbxref=NCBI_GP:WJG93048.1;Name=WJG93048.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF007587.0;locus_tag=PUW35_21875;product=hypothetical protein;protein_id=WJG93048.1;transl_table=11 CP118132.1 Genbank pseudogene 4517489 4517630 . + . ID=gene-PUW35_21880;Name=PUW35_21880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_21880;pseudo=true CP118132.1 Protein Homology CDS 4517489 4517630 . + 0 ID=cds-PUW35_21880;Parent=gene-PUW35_21880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=PUW35_21880;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4517600 4518088 . - . ID=gene-PUW35_21885;Name=PUW35_21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21885 CP118132.1 Protein Homology CDS 4517600 4518088 . - 0 ID=cds-WJG93049.1;Parent=gene-PUW35_21885;Dbxref=NCBI_GP:WJG93049.1;Name=WJG93049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=PUW35_21885;product=arginine repressor;protein_id=WJG93049.1;transl_table=11 CP118132.1 Genbank gene 4518275 4519678 . - . ID=gene-PUW35_21890;Name=PUW35_21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21890 CP118132.1 Protein Homology CDS 4518275 4519678 . - 0 ID=cds-WJG93050.1;Parent=gene-PUW35_21890;Dbxref=NCBI_GP:WJG93050.1;Name=WJG93050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=PUW35_21890;product=YfcC family protein;protein_id=WJG93050.1;transl_table=11 CP118132.1 Genbank gene 4519734 4520738 . - . ID=gene-PUW35_21895;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PUW35_21895 CP118132.1 Protein Homology CDS 4519734 4520738 . - 0 ID=cds-WJG93051.1;Parent=gene-PUW35_21895;Dbxref=NCBI_GP:WJG93051.1;Name=WJG93051.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=PUW35_21895;product=ornithine carbamoyltransferase;protein_id=WJG93051.1;transl_table=11 CP118132.1 Genbank gene 4520850 4521782 . - . ID=gene-PUW35_21900;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=PUW35_21900 CP118132.1 Protein Homology CDS 4520850 4521782 . - 0 ID=cds-WJG93052.1;Parent=gene-PUW35_21900;Dbxref=NCBI_GP:WJG93052.1;Name=WJG93052.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=PUW35_21900;product=carbamate kinase;protein_id=WJG93052.1;transl_table=11 CP118132.1 Genbank pseudogene 4521793 4523013 . - . ID=gene-PUW35_21905;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=pseudogene;locus_tag=PUW35_21905;pseudo=true CP118132.1 Protein Homology CDS 4521793 4523013 . - 0 ID=cds-PUW35_21905;Parent=gene-PUW35_21905;Note=internal stop;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=PUW35_21905;product=arginine deiminase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4523672 4524124 . + . ID=gene-PUW35_21910;Name=PUW35_21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21910 CP118132.1 Protein Homology CDS 4523672 4524124 . + 0 ID=cds-WJG93053.1;Parent=gene-PUW35_21910;Dbxref=NCBI_GP:WJG93053.1;Name=WJG93053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=PUW35_21910;product=YhcH/YjgK/YiaL family protein;protein_id=WJG93053.1;transl_table=11 CP118132.1 Genbank gene 4524198 4525202 . - . ID=gene-PUW35_21915;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PUW35_21915 CP118132.1 Protein Homology CDS 4524198 4525202 . - 0 ID=cds-WJG93054.1;Parent=gene-PUW35_21915;Dbxref=NCBI_GP:WJG93054.1;Name=WJG93054.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=PUW35_21915;product=ornithine carbamoyltransferase;protein_id=WJG93054.1;transl_table=11 CP118132.1 Genbank gene 4525368 4525784 . + . ID=gene-PUW35_21920;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=PUW35_21920 CP118132.1 Protein Homology CDS 4525368 4525784 . + 0 ID=cds-WJG93055.1;Parent=gene-PUW35_21920;Dbxref=NCBI_GP:WJG93055.1;Name=WJG93055.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=PUW35_21920;product=ribonuclease E inhibitor RraB;protein_id=WJG93055.1;transl_table=11 CP118132.1 Genbank gene 4525796 4526608 . + . ID=gene-PUW35_21925;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=PUW35_21925 CP118132.1 Protein Homology CDS 4525796 4526608 . + 0 ID=cds-WJG93056.1;Parent=gene-PUW35_21925;Dbxref=NCBI_GP:WJG93056.1;Name=WJG93056.1;gbkey=CDS;gene=miaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=PUW35_21925;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WJG93056.1;transl_table=11 CP118132.1 Genbank gene 4526842 4527330 . - . ID=gene-PUW35_21930;Name=PUW35_21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21930 CP118132.1 Protein Homology CDS 4526842 4527330 . - 0 ID=cds-WJG93057.1;Parent=gene-PUW35_21930;Dbxref=NCBI_GP:WJG93057.1;Name=WJG93057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=PUW35_21930;product=DUF3617 domain-containing protein;protein_id=WJG93057.1;transl_table=11 CP118132.1 Genbank gene 4527437 4527940 . - . ID=gene-PUW35_21935;Name=PUW35_21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21935 CP118132.1 Protein Homology CDS 4527437 4527940 . - 0 ID=cds-WJG93058.1;Parent=gene-PUW35_21935;Dbxref=NCBI_GP:WJG93058.1;Name=WJG93058.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=PUW35_21935;product=GNAT family N-acetyltransferase;protein_id=WJG93058.1;transl_table=11 CP118132.1 Genbank gene 4528135 4529322 . + . ID=gene-PUW35_21940;Name=PUW35_21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21940 CP118132.1 Protein Homology CDS 4528135 4529322 . + 0 ID=cds-WJG93059.1;Parent=gene-PUW35_21940;Dbxref=NCBI_GP:WJG93059.1;Name=WJG93059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=PUW35_21940;product=YjgN family protein;protein_id=WJG93059.1;transl_table=11 CP118132.1 Genbank gene 4529464 4532319 . - . ID=gene-PUW35_21945;Name=PUW35_21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21945 CP118132.1 Protein Homology CDS 4529464 4532319 . - 0 ID=cds-WJG93060.1;Parent=gene-PUW35_21945;Dbxref=NCBI_GP:WJG93060.1;Name=WJG93060.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=PUW35_21945;product=valine--tRNA ligase;protein_id=WJG93060.1;transl_table=11 CP118132.1 Genbank gene 4532319 4532762 . - . ID=gene-PUW35_21950;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=PUW35_21950 CP118132.1 Protein Homology CDS 4532319 4532762 . - 0 ID=cds-WJG95171.1;Parent=gene-PUW35_21950;Dbxref=NCBI_GP:WJG95171.1;Name=WJG95171.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=PUW35_21950;product=DNA polymerase III subunit chi;protein_id=WJG95171.1;transl_table=11 CP118132.1 Genbank gene 4532899 4534410 . - . ID=gene-PUW35_21955;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=PUW35_21955 CP118132.1 Protein Homology CDS 4532899 4534410 . - 0 ID=cds-WJG93061.1;Parent=gene-PUW35_21955;Dbxref=NCBI_GP:WJG93061.1;Name=WJG93061.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=PUW35_21955;product=leucyl aminopeptidase;protein_id=WJG93061.1;transl_table=11 CP118132.1 Genbank gene 4534635 4534685 . + . ID=gene-PUW35_21960;Name=PUW35_21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21960 CP118132.1 Protein Homology CDS 4534635 4534685 . + 0 ID=cds-WJG95172.1;Parent=gene-PUW35_21960;Dbxref=NCBI_GP:WJG95172.1;Name=WJG95172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=PUW35_21960;product=hypothetical protein;protein_id=WJG95172.1;transl_table=11 CP118132.1 Genbank pseudogene 4534748 4535847 . + . ID=gene-PUW35_21965;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=pseudogene;locus_tag=PUW35_21965;pseudo=true CP118132.1 Protein Homology CDS 4534748 4535847 . + 0 ID=cds-PUW35_21965;Parent=gene-PUW35_21965;Note=frameshifted;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=PUW35_21965;product=LPS export ABC transporter permease LptF;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4535847 4536928 . + . ID=gene-PUW35_21970;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=pseudogene;locus_tag=PUW35_21970;pseudo=true CP118132.1 Protein Homology CDS 4535847 4536928 . + 0 ID=cds-PUW35_21970;Parent=gene-PUW35_21970;Note=frameshifted;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=PUW35_21970;product=LPS export ABC transporter permease LptG;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4537134 4538132 . - . ID=gene-PUW35_21975;Name=PUW35_21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_21975 CP118132.1 Protein Homology CDS 4537134 4538132 . - 0 ID=cds-WJG93062.1;Parent=gene-PUW35_21975;Dbxref=NCBI_GP:WJG93062.1;Name=WJG93062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=PUW35_21975;product=LacI family DNA-binding transcriptional regulator;protein_id=WJG93062.1;transl_table=11 CP118132.1 Genbank pseudogene 4538196 4539514 . - . ID=gene-PUW35_21980;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=pseudogene;locus_tag=PUW35_21980;pseudo=true CP118132.1 Protein Homology CDS 4538196 4539514 . - 0 ID=cds-PUW35_21980;Parent=gene-PUW35_21980;Note=frameshifted;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=PUW35_21980;product=gnt-II system L-idonate transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4539576 4540340 . - . ID=gene-PUW35_21985;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=PUW35_21985 CP118132.1 Protein Homology CDS 4539576 4540340 . - 0 ID=cds-WJG93063.1;Parent=gene-PUW35_21985;Dbxref=NCBI_GP:WJG93063.1;Name=WJG93063.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=PUW35_21985;product=gluconate 5-dehydrogenase;protein_id=WJG93063.1;transl_table=11 CP118132.1 Genbank gene 4540365 4541396 . - . ID=gene-PUW35_21990;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=PUW35_21990 CP118132.1 Protein Homology CDS 4540365 4541396 . - 0 ID=cds-WJG93064.1;Parent=gene-PUW35_21990;Dbxref=NCBI_GP:WJG93064.1;Name=WJG93064.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=PUW35_21990;product=L-idonate 5-dehydrogenase;protein_id=WJG93064.1;transl_table=11 CP118132.1 Genbank gene 4541613 4542143 . + . ID=gene-PUW35_21995;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=PUW35_21995 CP118132.1 Protein Homology CDS 4541613 4542143 . + 0 ID=cds-WJG93065.1;Parent=gene-PUW35_21995;Dbxref=NCBI_GP:WJG93065.1;Name=WJG93065.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=PUW35_21995;product=gluconokinase;protein_id=WJG93065.1;transl_table=11 CP118132.1 Genbank gene 4542171 4543190 . - . ID=gene-PUW35_22000;Name=PUW35_22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22000 CP118132.1 Protein Homology CDS 4542171 4543190 . - 0 ID=cds-WJG93066.1;Parent=gene-PUW35_22000;Dbxref=NCBI_GP:WJG93066.1;Name=WJG93066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=PUW35_22000;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WJG93066.1;transl_table=11 CP118132.1 Genbank gene 4543413 4543497 . + . ID=gene-PUW35_22005;Name=PUW35_22005;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_22005 CP118132.1 tRNAscan-SE tRNA 4543413 4543497 . + . ID=rna-PUW35_22005;Parent=gene-PUW35_22005;anticodon=(pos:4543447..4543449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_22005;product=tRNA-Leu CP118132.1 tRNAscan-SE exon 4543413 4543497 . + . ID=exon-PUW35_22005-1;Parent=rna-PUW35_22005;anticodon=(pos:4543447..4543449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_22005;product=tRNA-Leu CP118132.1 Genbank gene 4543947 4544492 . + . ID=gene-PUW35_22010;Name=PUW35_22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22010 CP118132.1 Protein Homology CDS 4543947 4544492 . + 0 ID=cds-WJG95173.1;Parent=gene-PUW35_22010;Dbxref=NCBI_GP:WJG95173.1;Name=WJG95173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=PUW35_22010;product=helix-turn-helix domain-containing protein;protein_id=WJG95173.1;transl_table=11 CP118132.1 Genbank gene 4544569 4544817 . + . ID=gene-PUW35_22015;Name=PUW35_22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22015 CP118132.1 Protein Homology CDS 4544569 4544817 . + 0 ID=cds-WJG93067.1;Parent=gene-PUW35_22015;Dbxref=NCBI_GP:WJG93067.1;Name=WJG93067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168389.1;locus_tag=PUW35_22015;product=ribbon-helix-helix domain-containing protein;protein_id=WJG93067.1;transl_table=11 CP118132.1 Genbank gene 4544926 4545165 . + . ID=gene-PUW35_22020;Name=PUW35_22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22020 CP118132.1 Protein Homology CDS 4544926 4545165 . + 0 ID=cds-WJG93068.1;Parent=gene-PUW35_22020;Dbxref=NCBI_GP:WJG93068.1;Name=WJG93068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=PUW35_22020;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WJG93068.1;transl_table=11 CP118132.1 Genbank gene 4545168 4545476 . + . ID=gene-PUW35_22025;Name=PUW35_22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22025 CP118132.1 Protein Homology CDS 4545168 4545476 . + 0 ID=cds-WJG93069.1;Parent=gene-PUW35_22025;Dbxref=NCBI_GP:WJG93069.1;Name=WJG93069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=PUW35_22025;product=CcdB family protein;protein_id=WJG93069.1;transl_table=11 CP118132.1 Genbank pseudogene 4545882 4546022 . + . ID=gene-PUW35_22030;Name=PUW35_22030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22030;pseudo=true CP118132.1 Protein Homology CDS 4545882 4546022 . + 0 ID=cds-PUW35_22030;Parent=gene-PUW35_22030;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322911.1;locus_tag=PUW35_22030;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4546054 4547187 . - . ID=gene-PUW35_22035;Name=PUW35_22035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22035;pseudo=true CP118132.1 Protein Homology CDS 4546054 4547187 . - 0 ID=cds-PUW35_22035;Parent=gene-PUW35_22035;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW35_22035;product=IS3 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4547542 4548039 . + . ID=gene-PUW35_22040;Name=sefA;gbkey=Gene;gene=sefA;gene_biotype=protein_coding;locus_tag=PUW35_22040 CP118132.1 Protein Homology CDS 4547542 4548039 . + 0 ID=cds-WJG93070.1;Parent=gene-PUW35_22040;Dbxref=NCBI_GP:WJG93070.1;Name=WJG93070.1;gbkey=CDS;gene=sefA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674837.1;locus_tag=PUW35_22040;product=SEF14 fimbria major subunit SefA;protein_id=WJG93070.1;transl_table=11 CP118132.1 Genbank gene 4548161 4548901 . + . ID=gene-PUW35_22045;Name=sefB;gbkey=Gene;gene=sefB;gene_biotype=protein_coding;locus_tag=PUW35_22045 CP118132.1 Protein Homology CDS 4548161 4548901 . + 0 ID=cds-WJG93071.1;Parent=gene-PUW35_22045;Dbxref=NCBI_GP:WJG93071.1;Name=WJG93071.1;gbkey=CDS;gene=sefB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746655.1;locus_tag=PUW35_22045;product=SEF14/SEF18 fimbria chaperone SefB;protein_id=WJG93071.1;transl_table=11 CP118132.1 Genbank pseudogene 4548918 4551016 . + . ID=gene-PUW35_22050;Name=PUW35_22050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22050;pseudo=true CP118132.1 Protein Homology CDS 4548918 4551016 . + 0 ID=cds-PUW35_22050;Parent=gene-PUW35_22050;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF025320.2;locus_tag=PUW35_22050;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4551092 4551319 . + . ID=gene-PUW35_22055;Name=PUW35_22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22055 CP118132.1 Protein Homology CDS 4551092 4551319 . + 0 ID=cds-WJG93072.1;Parent=gene-PUW35_22055;Dbxref=NCBI_GP:WJG93072.1;Name=WJG93072.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025319.2;locus_tag=PUW35_22055;product=FimD/PapC C-terminal domain-containing protein;protein_id=WJG93072.1;transl_table=11 CP118132.1 Genbank gene 4551359 4551574 . + . ID=gene-PUW35_22060;Name=PUW35_22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22060 CP118132.1 GeneMarkS-2+ CDS 4551359 4551574 . + 0 ID=cds-WJG93073.1;Parent=gene-PUW35_22060;Dbxref=NCBI_GP:WJG93073.1;Name=WJG93073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_22060;product=hypothetical protein;protein_id=WJG93073.1;transl_table=11 CP118132.1 Genbank gene 4551607 4551804 . + . ID=gene-PUW35_22065;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=PUW35_22065 CP118132.1 Protein Homology CDS 4551607 4551804 . + 0 ID=cds-WJG95174.1;Parent=gene-PUW35_22065;Dbxref=NCBI_GP:WJG95174.1;Name=WJG95174.1;gbkey=CDS;gene=afaD;inference=COORDINATES: protein motif:HMM:NF017581.2;locus_tag=PUW35_22065;product=AfaD family invasin;protein_id=WJG95174.1;transl_table=11 CP118132.1 Genbank gene 4551838 4552653 . - . ID=gene-PUW35_22070;Name=PUW35_22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22070 CP118132.1 Protein Homology CDS 4551838 4552653 . - 0 ID=cds-WJG93074.1;Parent=gene-PUW35_22070;Dbxref=NCBI_GP:WJG93074.1;Name=WJG93074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723051.1;locus_tag=PUW35_22070;product=helix-turn-helix transcriptional regulator;protein_id=WJG93074.1;transl_table=11 CP118132.1 Genbank gene 4553230 4553439 . + . ID=gene-PUW35_22075;Name=pefI;gbkey=Gene;gene=pefI;gene_biotype=protein_coding;locus_tag=PUW35_22075 CP118132.1 Protein Homology CDS 4553230 4553439 . + 0 ID=cds-WJG93075.1;Parent=gene-PUW35_22075;Dbxref=NCBI_GP:WJG93075.1;Name=WJG93075.1;gbkey=CDS;gene=pefI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490505.1;locus_tag=PUW35_22075;product=transcriptional regulator PefI;protein_id=WJG93075.1;transl_table=11 CP118132.1 Genbank gene 4553424 4553774 . + . ID=gene-PUW35_22080;Name=PUW35_22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22080 CP118132.1 Protein Homology CDS 4553424 4553774 . + 0 ID=cds-WJG93076.1;Parent=gene-PUW35_22080;Dbxref=NCBI_GP:WJG93076.1;Name=WJG93076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490504.1;locus_tag=PUW35_22080;product=helix-turn-helix transcriptional regulator;protein_id=WJG93076.1;transl_table=11 CP118132.1 Genbank gene 4554019 4554672 . + . ID=gene-PUW35_22085;Name=PUW35_22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22085 CP118132.1 Protein Homology CDS 4554019 4554672 . + 0 ID=cds-WJG93077.1;Parent=gene-PUW35_22085;Dbxref=NCBI_GP:WJG93077.1;Name=WJG93077.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490503.1;locus_tag=PUW35_22085;product=DsbA family protein;protein_id=WJG93077.1;transl_table=11 CP118132.1 Genbank gene 4554662 4554808 . + . ID=gene-PUW35_22090;Name=PUW35_22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22090 CP118132.1 Protein Homology CDS 4554662 4554808 . + 0 ID=cds-WJG93078.1;Parent=gene-PUW35_22090;Dbxref=NCBI_GP:WJG93078.1;Name=WJG93078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141719.1;locus_tag=PUW35_22090;product=hypothetical protein;protein_id=WJG93078.1;transl_table=11 CP118132.1 Genbank gene 4554859 4555704 . + . ID=gene-PUW35_22095;Name=PUW35_22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22095 CP118132.1 Protein Homology CDS 4554859 4555704 . + 0 ID=cds-WJG93079.1;Parent=gene-PUW35_22095;Dbxref=NCBI_GP:WJG93079.1;Name=WJG93079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526839.1;locus_tag=PUW35_22095;product=YjiK family protein;protein_id=WJG93079.1;transl_table=11 CP118132.1 Genbank pseudogene 4555967 4557077 . + . ID=gene-PUW35_22100;Name=PUW35_22100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22100;pseudo=true CP118132.1 Protein Homology CDS 4555967 4557077 . + 0 ID=cds-PUW35_22100;Parent=gene-PUW35_22100;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=PUW35_22100;product=IS3 family transposase;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4557333 4558208 . + . ID=gene-PUW35_22105;Name=PUW35_22105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22105;pseudo=true CP118132.1 Protein Homology CDS 4557333 4558208 . + 0 ID=cds-PUW35_22105;Parent=gene-PUW35_22105;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=PUW35_22105;product=HNH endonuclease;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4558688 4559404 . - . ID=gene-PUW35_22110;Name=PUW35_22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22110 CP118132.1 Protein Homology CDS 4558688 4559404 . - 0 ID=cds-WJG93080.1;Parent=gene-PUW35_22110;Dbxref=NCBI_GP:WJG93080.1;Name=WJG93080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=PUW35_22110;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WJG93080.1;transl_table=11 CP118132.1 Genbank gene 4559964 4561595 . - . ID=gene-PUW35_22115;Name=PUW35_22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22115 CP118132.1 Protein Homology CDS 4559964 4561595 . - 0 ID=cds-WJG93081.1;Parent=gene-PUW35_22115;Dbxref=NCBI_GP:WJG93081.1;Name=WJG93081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=PUW35_22115;product=class I SAM-dependent methyltransferase;protein_id=WJG93081.1;transl_table=11 CP118132.1 Genbank gene 4561600 4561857 . - . ID=gene-PUW35_22120;Name=PUW35_22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22120 CP118132.1 Protein Homology CDS 4561600 4561857 . - 0 ID=cds-WJG93082.1;Parent=gene-PUW35_22120;Dbxref=NCBI_GP:WJG93082.1;Name=WJG93082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=PUW35_22120;product=YjhX family toxin;protein_id=WJG93082.1;transl_table=11 CP118132.1 Genbank gene 4562345 4562953 . + . ID=gene-PUW35_22125;Name=PUW35_22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22125 CP118132.1 Protein Homology CDS 4562345 4562953 . + 0 ID=cds-WJG93083.1;Parent=gene-PUW35_22125;Dbxref=NCBI_GP:WJG93083.1;Name=WJG93083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=PUW35_22125;product=DUF1062 domain-containing protein;protein_id=WJG93083.1;transl_table=11 CP118132.1 Genbank pseudogene 4563305 4564191 . + . ID=gene-PUW35_22130;Name=PUW35_22130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22130;pseudo=true CP118132.1 Protein Homology CDS 4563305 4564191 . + 0 ID=cds-PUW35_22130;Parent=gene-PUW35_22130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=PUW35_22130;product=hypothetical protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4564438 4564857 . + . ID=gene-PUW35_22135;Name=PUW35_22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22135 CP118132.1 Protein Homology CDS 4564438 4564857 . + 0 ID=cds-WJG93084.1;Parent=gene-PUW35_22135;Dbxref=NCBI_GP:WJG93084.1;Name=WJG93084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=PUW35_22135;product=DUF302 domain-containing protein;protein_id=WJG93084.1;transl_table=11 CP118132.1 Genbank gene 4564874 4565539 . - . ID=gene-PUW35_22140;Name=PUW35_22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22140 CP118132.1 Protein Homology CDS 4564874 4565539 . - 0 ID=cds-WJG93085.1;Parent=gene-PUW35_22140;Dbxref=NCBI_GP:WJG93085.1;Name=WJG93085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588696.1;locus_tag=PUW35_22140;product=dienelactone hydrolase family protein;protein_id=WJG93085.1;transl_table=11 CP118132.1 Genbank gene 4565889 4566662 . + . ID=gene-PUW35_22145;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=PUW35_22145 CP118132.1 Protein Homology CDS 4565889 4566662 . + 0 ID=cds-WJG93086.1;Parent=gene-PUW35_22145;Dbxref=NCBI_GP:WJG93086.1;Name=WJG93086.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=PUW35_22145;product=Uxu operon transcriptional regulator;protein_id=WJG93086.1;transl_table=11 CP118132.1 Genbank gene 4566663 4567676 . - . ID=gene-PUW35_22150;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PUW35_22150 CP118132.1 Protein Homology CDS 4566663 4567676 . - 0 ID=cds-WJG93087.1;Parent=gene-PUW35_22150;Dbxref=NCBI_GP:WJG93087.1;Name=WJG93087.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=PUW35_22150;product=tryptophan--tRNA ligase;protein_id=WJG93087.1;transl_table=11 CP118132.1 Genbank gene 4568389 4568919 . + . ID=gene-PUW35_22155;Name=PUW35_22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22155 CP118132.1 Protein Homology CDS 4568389 4568919 . + 0 ID=cds-WJG93088.1;Parent=gene-PUW35_22155;Dbxref=NCBI_GP:WJG93088.1;Name=WJG93088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=PUW35_22155;product=Hcp family type VI secretion system effector;protein_id=WJG93088.1;transl_table=11 CP118132.1 Genbank pseudogene 4569158 4569893 . + . ID=gene-PUW35_22160;Name=PUW35_22160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22160;pseudo=true CP118132.1 Protein Homology CDS 4569158 4569893 . + 0 ID=cds-PUW35_22160;Parent=gene-PUW35_22160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=PUW35_22160;product=aspartate/glutamate racemase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4569899 4570807 . - . ID=gene-PUW35_22165;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=PUW35_22165 CP118132.1 Protein Homology CDS 4569899 4570807 . - 0 ID=cds-WJG93089.1;Parent=gene-PUW35_22165;Dbxref=NCBI_GP:WJG93089.1;Name=WJG93089.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=PUW35_22165;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WJG93089.1;transl_table=11 CP118132.1 Genbank gene 4570926 4572098 . - . ID=gene-PUW35_22170;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=PUW35_22170 CP118132.1 Protein Homology CDS 4570926 4572098 . - 0 ID=cds-WJG93090.1;Parent=gene-PUW35_22170;Dbxref=NCBI_GP:WJG93090.1;Name=WJG93090.1;Ontology_term=GO:0006508,GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=PUW35_22170;product=beta-aspartyl-peptidase;protein_id=WJG93090.1;transl_table=11 CP118132.1 Genbank gene 4572111 4572572 . - . ID=gene-PUW35_22175;Name=PUW35_22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22175 CP118132.1 Protein Homology CDS 4572111 4572572 . - 0 ID=cds-WJG93091.1;Parent=gene-PUW35_22175;Dbxref=NCBI_GP:WJG93091.1;Name=WJG93091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=PUW35_22175;product=YjiG family protein;protein_id=WJG93091.1;transl_table=11 CP118132.1 Genbank gene 4572569 4573240 . - . ID=gene-PUW35_22180;Name=PUW35_22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22180 CP118132.1 Protein Homology CDS 4572569 4573240 . - 0 ID=cds-WJG93092.1;Parent=gene-PUW35_22180;Dbxref=NCBI_GP:WJG93092.1;Name=WJG93092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068748.1;locus_tag=PUW35_22180;product=nucleoside recognition domain-containing protein;protein_id=WJG93092.1;transl_table=11 CP118132.1 Genbank pseudogene 4574113 4575296 . - . ID=gene-PUW35_22185;Name=PUW35_22185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22185;pseudo=true CP118132.1 Protein Homology CDS 4574113 4575296 . - 0 ID=cds-PUW35_22185;Parent=gene-PUW35_22185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=PUW35_22185;product=MFS transporter;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4575516 4576787 . - . ID=gene-PUW35_22190;Name=PUW35_22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22190 CP118132.1 Protein Homology CDS 4575516 4576787 . - 0 ID=cds-WJG93093.1;Parent=gene-PUW35_22190;Dbxref=NCBI_GP:WJG93093.1;Name=WJG93093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=PUW35_22190;product=DUF445 domain-containing protein;protein_id=WJG93093.1;transl_table=11 CP118132.1 Genbank gene 4576874 4578115 . - . ID=gene-PUW35_22195;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=PUW35_22195 CP118132.1 Protein Homology CDS 4576874 4578115 . - 0 ID=cds-WJG93094.1;Parent=gene-PUW35_22195;Dbxref=NCBI_GP:WJG93094.1;Name=WJG93094.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=PUW35_22195;product=multidrug efflux MFS transporter MdtM;protein_id=WJG93094.1;transl_table=11 CP118132.1 Genbank gene 4578594 4579547 . + . ID=gene-PUW35_22200;Name=PUW35_22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22200 CP118132.1 Protein Homology CDS 4578594 4579547 . + 0 ID=cds-WJG93095.1;Parent=gene-PUW35_22200;Dbxref=NCBI_GP:WJG93095.1;Name=WJG93095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=PUW35_22200;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG93095.1;transl_table=11 CP118132.1 Genbank pseudogene 4579728 4580171 . + . ID=gene-PUW35_22205;Name=PUW35_22205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22205;pseudo=true CP118132.1 Protein Homology CDS 4579728 4580171 . + 0 ID=cds-PUW35_22205;Parent=gene-PUW35_22205;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=PUW35_22205;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 CP118132.1 Genbank pseudogene 4580130 4581371 . - . ID=gene-PUW35_22210;Name=PUW35_22210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22210;pseudo=true CP118132.1 Protein Homology CDS 4580130 4581371 . - 0 ID=cds-PUW35_22210;Parent=gene-PUW35_22210;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461652.1;locus_tag=PUW35_22210;product=type I restriction endonuclease;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4581466 4582770 . - . ID=gene-PUW35_22215;Name=PUW35_22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22215 CP118132.1 Protein Homology CDS 4581466 4582770 . - 0 ID=cds-WJG93096.1;Parent=gene-PUW35_22215;Dbxref=NCBI_GP:WJG93096.1;Name=WJG93096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863532.1;locus_tag=PUW35_22215;product=type I restriction-modification protein specificity subunit;protein_id=WJG93096.1;transl_table=11 CP118132.1 Genbank gene 4582760 4584379 . - . ID=gene-PUW35_22220;Name=PUW35_22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22220 CP118132.1 Protein Homology CDS 4582760 4584379 . - 0 ID=cds-WJG93097.1;Parent=gene-PUW35_22220;Dbxref=NCBI_GP:WJG93097.1;Name=WJG93097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238256.1;locus_tag=PUW35_22220;product=class I SAM-dependent DNA methyltransferase;protein_id=WJG93097.1;transl_table=11 CP118132.1 Genbank pseudogene 4584443 4585609 . - . ID=gene-PUW35_22225;Name=PUW35_22225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22225;pseudo=true CP118132.1 Protein Homology CDS 4584443 4585609 . - 0 ID=cds-PUW35_22225;Parent=gene-PUW35_22225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800831.1;locus_tag=PUW35_22225;product=restriction endonuclease;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4585734 4585868 . + . ID=gene-PUW35_22230;Name=PUW35_22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22230 CP118132.1 Protein Homology CDS 4585734 4585868 . + 0 ID=cds-WJG93098.1;Parent=gene-PUW35_22230;Dbxref=NCBI_GP:WJG93098.1;Name=WJG93098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055725.1;locus_tag=PUW35_22230;product=hypothetical protein;protein_id=WJG93098.1;transl_table=11 CP118132.1 Genbank gene 4585900 4586646 . - . ID=gene-PUW35_22235;Name=PUW35_22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22235 CP118132.1 Protein Homology CDS 4585900 4586646 . - 0 ID=cds-WJG95175.1;Parent=gene-PUW35_22235;Dbxref=NCBI_GP:WJG95175.1;Name=WJG95175.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=PUW35_22235;product=N-6 DNA methylase;protein_id=WJG95175.1;transl_table=11 CP118132.1 Genbank gene 4587156 4587731 . - . ID=gene-PUW35_22240;Name=PUW35_22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22240 CP118132.1 Protein Homology CDS 4587156 4587731 . - 0 ID=cds-WJG95176.1;Parent=gene-PUW35_22240;Dbxref=NCBI_GP:WJG95176.1;Name=WJG95176.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539933.1;locus_tag=PUW35_22240;product=restriction endonuclease subunit S;protein_id=WJG95176.1;transl_table=11 CP118132.1 Genbank gene 4588344 4590185 . - . ID=gene-PUW35_22245;Name=PUW35_22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22245 CP118132.1 Protein Homology CDS 4588344 4590185 . - 0 ID=cds-WJG93099.1;Parent=gene-PUW35_22245;Dbxref=NCBI_GP:WJG93099.1;Name=WJG93099.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974638.1;locus_tag=PUW35_22245;product=3'-5' exonuclease;protein_id=WJG93099.1;transl_table=11 CP118132.1 Genbank gene 4590588 4590875 . + . ID=gene-PUW35_22250;Name=PUW35_22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22250 CP118132.1 Protein Homology CDS 4590588 4590875 . + 0 ID=cds-WJG93100.1;Parent=gene-PUW35_22250;Dbxref=NCBI_GP:WJG93100.1;Name=WJG93100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=PUW35_22250;product=BrnT family toxin;protein_id=WJG93100.1;transl_table=11 CP118132.1 Genbank gene 4590862 4591164 . + . ID=gene-PUW35_22255;Name=PUW35_22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22255 CP118132.1 Protein Homology CDS 4590862 4591164 . + 0 ID=cds-WJG93101.1;Parent=gene-PUW35_22255;Dbxref=NCBI_GP:WJG93101.1;Name=WJG93101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=PUW35_22255;product=BrnA antitoxin family protein;protein_id=WJG93101.1;transl_table=11 CP118132.1 Genbank gene 4591239 4592195 . - . ID=gene-PUW35_22260;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=PUW35_22260 CP118132.1 Protein Homology CDS 4591239 4592195 . - 0 ID=cds-WJG93102.1;Parent=gene-PUW35_22260;Dbxref=NCBI_GP:WJG93102.1;Name=WJG93102.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=PUW35_22260;product=GTPase;protein_id=WJG93102.1;transl_table=11 CP118132.1 Genbank gene 4592206 4592409 . - . ID=gene-PUW35_22265;Name=PUW35_22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22265 CP118132.1 Protein Homology CDS 4592206 4592409 . - 0 ID=cds-WJG93103.1;Parent=gene-PUW35_22265;Dbxref=NCBI_GP:WJG93103.1;Name=WJG93103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=PUW35_22265;product=YbdD/YjiX family protein;protein_id=WJG93103.1;transl_table=11 CP118132.1 Genbank gene 4592504 4594654 . - . ID=gene-PUW35_22270;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=PUW35_22270 CP118132.1 Protein Homology CDS 4592504 4594654 . - 0 ID=cds-WJG93104.1;Parent=gene-PUW35_22270;Dbxref=NCBI_GP:WJG93104.1;Name=WJG93104.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=PUW35_22270;product=pyruvate/proton symporter BtsT;protein_id=WJG93104.1;transl_table=11 CP118132.1 Genbank gene 4595021 4596682 . + . ID=gene-PUW35_22275;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=PUW35_22275 CP118132.1 Protein Homology CDS 4595021 4596682 . + 0 ID=cds-WJG93105.1;Parent=gene-PUW35_22275;Dbxref=NCBI_GP:WJG93105.1;Name=WJG93105.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=PUW35_22275;product=methyl-accepting chemotaxis protein;protein_id=WJG93105.1;transl_table=11 CP118132.1 Genbank gene 4597005 4599770 . + . ID=gene-PUW35_22280;Name=PUW35_22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22280 CP118132.1 Protein Homology CDS 4597005 4599770 . + 0 ID=cds-WJG93106.1;Parent=gene-PUW35_22280;Dbxref=NCBI_GP:WJG93106.1;Name=WJG93106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=PUW35_22280;product=sigma-54-dependent transcriptional regulator;protein_id=WJG93106.1;transl_table=11 CP118132.1 Genbank gene 4599872 4600294 . + . ID=gene-PUW35_22285;Name=PUW35_22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22285 CP118132.1 Protein Homology CDS 4599872 4600294 . + 0 ID=cds-WJG93107.1;Parent=gene-PUW35_22285;Dbxref=NCBI_GP:WJG93107.1;Name=WJG93107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=PUW35_22285;product=PTS sugar transporter subunit IIA;protein_id=WJG93107.1;transl_table=11 CP118132.1 Genbank gene 4600309 4600770 . + . ID=gene-PUW35_22290;Name=PUW35_22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22290 CP118132.1 Protein Homology CDS 4600309 4600770 . + 0 ID=cds-WJG93108.1;Parent=gene-PUW35_22290;Dbxref=NCBI_GP:WJG93108.1;Name=WJG93108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=PUW35_22290;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WJG93108.1;transl_table=11 CP118132.1 Genbank gene 4600796 4601575 . + . ID=gene-PUW35_22295;Name=PUW35_22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22295 CP118132.1 Protein Homology CDS 4600796 4601575 . + 0 ID=cds-WJG93109.1;Parent=gene-PUW35_22295;Dbxref=NCBI_GP:WJG93109.1;Name=WJG93109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=PUW35_22295;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WJG93109.1;transl_table=11 CP118132.1 Genbank gene 4601553 4602401 . + . ID=gene-PUW35_22300;Name=PUW35_22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22300 CP118132.1 Protein Homology CDS 4601553 4602401 . + 0 ID=cds-WJG93110.1;Parent=gene-PUW35_22300;Dbxref=NCBI_GP:WJG93110.1;Name=WJG93110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=PUW35_22300;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WJG93110.1;transl_table=11 CP118132.1 Genbank pseudogene 4602414 4603471 . + . ID=gene-PUW35_22305;Name=PUW35_22305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22305;pseudo=true CP118132.1 Protein Homology CDS 4602414 4603471 . + 0 ID=cds-PUW35_22305;Parent=gene-PUW35_22305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=PUW35_22305;product=SIS domain-containing protein;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4603489 4604499 . + . ID=gene-PUW35_22310;Name=PUW35_22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22310 CP118132.1 Protein Homology CDS 4603489 4604499 . + 0 ID=cds-WJG93111.1;Parent=gene-PUW35_22310;Dbxref=NCBI_GP:WJG93111.1;Name=WJG93111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=PUW35_22310;product=SIS domain-containing protein;protein_id=WJG93111.1;transl_table=11 CP118132.1 Genbank gene 4604633 4606924 . - . ID=gene-PUW35_22315;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=PUW35_22315 CP118132.1 Protein Homology CDS 4604633 4606924 . - 0 ID=cds-WJG93112.1;Parent=gene-PUW35_22315;Dbxref=NCBI_GP:WJG93112.1;Name=WJG93112.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465680.1;locus_tag=PUW35_22315;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WJG93112.1;transl_table=11 CP118132.1 Genbank gene 4607207 4607668 . - . ID=gene-PUW35_22320;Name=PUW35_22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22320 CP118132.1 Protein Homology CDS 4607207 4607668 . - 0 ID=cds-WJG93113.1;Parent=gene-PUW35_22320;Dbxref=NCBI_GP:WJG93113.1;Name=WJG93113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=PUW35_22320;product=DUF2501 domain-containing protein;protein_id=WJG93113.1;transl_table=11 CP118132.1 Genbank gene 4607726 4608463 . - . ID=gene-PUW35_22325;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=PUW35_22325 CP118132.1 Protein Homology CDS 4607726 4608463 . - 0 ID=cds-WJG93114.1;Parent=gene-PUW35_22325;Dbxref=NCBI_GP:WJG93114.1;Name=WJG93114.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=PUW35_22325;product=DNA replication protein DnaC;protein_id=WJG93114.1;transl_table=11 CP118132.1 Genbank gene 4608466 4609005 . - . ID=gene-PUW35_22330;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=PUW35_22330 CP118132.1 Protein Homology CDS 4608466 4609005 . - 0 ID=cds-WJG93115.1;Parent=gene-PUW35_22330;Dbxref=NCBI_GP:WJG93115.1;Name=WJG93115.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=PUW35_22330;product=primosomal protein DnaT;protein_id=WJG93115.1;transl_table=11 CP118132.1 Genbank gene 4609098 4609571 . - . ID=gene-PUW35_22335;Name=PUW35_22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22335 CP118132.1 Protein Homology CDS 4609098 4609571 . - 0 ID=cds-WJG93116.1;Parent=gene-PUW35_22335;Dbxref=NCBI_GP:WJG93116.1;Name=WJG93116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=PUW35_22335;product=threonine/serine exporter;protein_id=WJG93116.1;transl_table=11 CP118132.1 Genbank gene 4609562 4610338 . - . ID=gene-PUW35_22340;Name=PUW35_22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22340 CP118132.1 Protein Homology CDS 4609562 4610338 . - 0 ID=cds-WJG93117.1;Parent=gene-PUW35_22340;Dbxref=NCBI_GP:WJG93117.1;Name=WJG93117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=PUW35_22340;product=threonine/serine exporter ThrE family protein;protein_id=WJG93117.1;transl_table=11 CP118132.1 Genbank gene 4611051 4611776 . + . ID=gene-PUW35_22345;Name=PUW35_22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22345 CP118132.1 Protein Homology CDS 4611051 4611776 . + 0 ID=cds-WJG93118.1;Parent=gene-PUW35_22345;Dbxref=NCBI_GP:WJG93118.1;Name=WJG93118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=PUW35_22345;product=response regulator transcription factor;protein_id=WJG93118.1;transl_table=11 CP118132.1 Genbank gene 4611737 4612411 . + . ID=gene-PUW35_22350;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=PUW35_22350 CP118132.1 Protein Homology CDS 4611737 4612411 . + 0 ID=cds-WJG93119.1;Parent=gene-PUW35_22350;Dbxref=NCBI_GP:WJG93119.1;Name=WJG93119.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=PUW35_22350;product=DNA-binding transcriptional activator BglJ;protein_id=WJG93119.1;transl_table=11 CP118132.1 Genbank gene 4612462 4612920 . - . ID=gene-PUW35_22355;Name=PUW35_22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22355 CP118132.1 Protein Homology CDS 4612462 4612920 . - 0 ID=cds-WJG93120.1;Parent=gene-PUW35_22355;Dbxref=NCBI_GP:WJG93120.1;Name=WJG93120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=PUW35_22355;product=YbaK/EbsC family protein;protein_id=WJG93120.1;transl_table=11 CP118132.1 Genbank gene 4613079 4613867 . - . ID=gene-PUW35_22360;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=PUW35_22360 CP118132.1 Protein Homology CDS 4613079 4613867 . - 0 ID=cds-WJG93121.1;Parent=gene-PUW35_22360;Dbxref=NCBI_GP:WJG93121.1;Name=WJG93121.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=PUW35_22360;product=siderophore-iron reductase FhuF;protein_id=WJG93121.1;transl_table=11 CP118132.1 Genbank gene 4613988 4615052 . - . ID=gene-PUW35_22365;Name=PUW35_22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22365 CP118132.1 Protein Homology CDS 4613988 4615052 . - 0 ID=cds-WJG93122.1;Parent=gene-PUW35_22365;Dbxref=NCBI_GP:WJG93122.1;Name=WJG93122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=PUW35_22365;product=GGDEF domain-containing protein;protein_id=WJG93122.1;transl_table=11 CP118132.1 Genbank gene 4615303 4615539 . + . ID=gene-PUW35_22370;Name=PUW35_22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22370 CP118132.1 Protein Homology CDS 4615303 4615539 . + 0 ID=cds-WJG93123.1;Parent=gene-PUW35_22370;Dbxref=NCBI_GP:WJG93123.1;Name=WJG93123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=PUW35_22370;product=DUF1435 domain-containing protein;protein_id=WJG93123.1;transl_table=11 CP118132.1 Genbank gene 4615571 4615657 . - . ID=gene-PUW35_22375;Name=PUW35_22375;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW35_22375 CP118132.1 tRNAscan-SE tRNA 4615571 4615657 . - . ID=rna-PUW35_22375;Parent=gene-PUW35_22375;anticodon=(pos:complement(4615621..4615623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_22375;product=tRNA-Leu CP118132.1 tRNAscan-SE exon 4615571 4615657 . - . ID=exon-PUW35_22375-1;Parent=rna-PUW35_22375;anticodon=(pos:complement(4615621..4615623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW35_22375;product=tRNA-Leu CP118132.1 Genbank gene 4615848 4616876 . - . ID=gene-PUW35_22380;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=PUW35_22380 CP118132.1 Protein Homology CDS 4615848 4616876 . - 0 ID=cds-WJG93124.1;Parent=gene-PUW35_22380;Dbxref=NCBI_GP:WJG93124.1;Name=WJG93124.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=PUW35_22380;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WJG93124.1;transl_table=11 CP118132.1 Genbank gene 4616979 4617416 . + . ID=gene-PUW35_22385;Name=PUW35_22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22385 CP118132.1 Protein Homology CDS 4616979 4617416 . + 0 ID=cds-WJG93125.1;Parent=gene-PUW35_22385;Dbxref=NCBI_GP:WJG93125.1;Name=WJG93125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=PUW35_22385;product=DNA polymerase III subunit psi;protein_id=WJG93125.1;transl_table=11 CP118132.1 Genbank gene 4617361 4617807 . + . ID=gene-PUW35_22390;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=PUW35_22390 CP118132.1 Protein Homology CDS 4617361 4617807 . + 0 ID=cds-WJG93126.1;Parent=gene-PUW35_22390;Dbxref=NCBI_GP:WJG93126.1;Name=WJG93126.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=PUW35_22390;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WJG93126.1;transl_table=11 CP118132.1 Genbank gene 4617829 4618506 . + . ID=gene-PUW35_22395;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=PUW35_22395 CP118132.1 Protein Homology CDS 4617829 4618506 . + 0 ID=cds-WJG95177.1;Parent=gene-PUW35_22395;Dbxref=NCBI_GP:WJG95177.1;Name=WJG95177.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=PUW35_22395;product=pyrimidine 5'-nucleotidase;protein_id=WJG95177.1;transl_table=11 CP118132.1 Genbank gene 4618598 4620187 . + . ID=gene-PUW35_22400;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=PUW35_22400 CP118132.1 Protein Homology CDS 4618598 4620187 . + 0 ID=cds-WJG93127.1;Parent=gene-PUW35_22400;Dbxref=NCBI_GP:WJG93127.1;Name=WJG93127.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=PUW35_22400;product=peptide chain release factor 3;protein_id=WJG93127.1;transl_table=11 CP118132.1 Genbank gene 4620589 4621206 . + . ID=gene-PUW35_22405;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PUW35_22405 CP118132.1 Protein Homology CDS 4620589 4621206 . + 0 ID=cds-WJG93128.1;Parent=gene-PUW35_22405;Dbxref=NCBI_GP:WJG93128.1;Name=WJG93128.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=PUW35_22405;product=molecular chaperone OsmY;protein_id=WJG93128.1;transl_table=11 CP118132.1 Genbank gene 4621335 4621496 . + . ID=gene-PUW35_22410;Name=PUW35_22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22410 CP118132.1 Protein Homology CDS 4621335 4621496 . + 0 ID=cds-WJG93129.1;Parent=gene-PUW35_22410;Dbxref=NCBI_GP:WJG93129.1;Name=WJG93129.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=PUW35_22410;product=DUF1328 domain-containing protein;protein_id=WJG93129.1;transl_table=11 CP118132.1 Genbank gene 4621620 4622693 . + . ID=gene-PUW35_22415;Name=PUW35_22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22415 CP118132.1 Protein Homology CDS 4621620 4622693 . + 0 ID=cds-WJG95178.1;Parent=gene-PUW35_22415;Dbxref=NCBI_GP:WJG95178.1;Name=WJG95178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=PUW35_22415;product=patatin family protein;protein_id=WJG95178.1;transl_table=11 CP118132.1 Genbank gene 4622690 4623463 . + . ID=gene-PUW35_22420;Name=PUW35_22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22420 CP118132.1 Protein Homology CDS 4622690 4623463 . + 0 ID=cds-WJG93130.1;Parent=gene-PUW35_22420;Dbxref=NCBI_GP:WJG93130.1;Name=WJG93130.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=PUW35_22420;product=metal-dependent hydrolase;protein_id=WJG93130.1;transl_table=11 CP118132.1 Genbank gene 4623496 4624359 . - . ID=gene-PUW35_22425;Name=PUW35_22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22425 CP118132.1 Protein Homology CDS 4623496 4624359 . - 0 ID=cds-WJG93131.1;Parent=gene-PUW35_22425;Dbxref=NCBI_GP:WJG93131.1;Name=WJG93131.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=PUW35_22425;product=YjjW family glycine radical enzyme activase;protein_id=WJG93131.1;transl_table=11 CP118132.1 Genbank gene 4624331 4625881 . - . ID=gene-PUW35_22430;Name=PUW35_22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22430 CP118132.1 Protein Homology CDS 4624331 4625881 . - 0 ID=cds-WJG93132.1;Parent=gene-PUW35_22430;Dbxref=NCBI_GP:WJG93132.1;Name=WJG93132.1;Ontology_term=GO:0008150,GO:0003824,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=PUW35_22430;product=YjjI family glycine radical enzyme;protein_id=WJG93132.1;transl_table=11 CP118132.1 Genbank gene 4626141 4626920 . + . ID=gene-PUW35_22435;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=PUW35_22435 CP118132.1 Protein Homology CDS 4626141 4626920 . + 0 ID=cds-WJG93133.1;Parent=gene-PUW35_22435;Dbxref=NCBI_GP:WJG93133.1;Name=WJG93133.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=PUW35_22435;product=deoxyribose-phosphate aldolase;protein_id=WJG93133.1;transl_table=11 CP118132.1 Genbank gene 4627044 4628366 . + . ID=gene-PUW35_22440;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=PUW35_22440 CP118132.1 Protein Homology CDS 4627044 4628366 . + 0 ID=cds-WJG93134.1;Parent=gene-PUW35_22440;Dbxref=NCBI_GP:WJG93134.1;Name=WJG93134.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=PUW35_22440;product=thymidine phosphorylase;protein_id=WJG93134.1;transl_table=11 CP118132.1 Genbank gene 4628418 4629641 . + . ID=gene-PUW35_22445;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=PUW35_22445 CP118132.1 Protein Homology CDS 4628418 4629641 . + 0 ID=cds-WJG93135.1;Parent=gene-PUW35_22445;Dbxref=NCBI_GP:WJG93135.1;Name=WJG93135.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=PUW35_22445;product=phosphopentomutase;protein_id=WJG93135.1;transl_table=11 CP118132.1 Genbank gene 4629851 4630570 . + . ID=gene-PUW35_22450;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=PUW35_22450 CP118132.1 Protein Homology CDS 4629851 4630570 . + 0 ID=cds-WJG93136.1;Parent=gene-PUW35_22450;Dbxref=NCBI_GP:WJG93136.1;Name=WJG93136.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=PUW35_22450;product=purine-nucleoside phosphorylase;protein_id=WJG93136.1;transl_table=11 CP118132.1 Genbank pseudogene 4630749 4632070 . + . ID=gene-PUW35_22455;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=pseudogene;locus_tag=PUW35_22455;pseudo=true CP118132.1 Protein Homology CDS 4630749 4632070 . + 0 ID=cds-PUW35_22455;Parent=gene-PUW35_22455;Note=frameshifted;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=PUW35_22455;product=type II toxin-antitoxin system HipA family toxin YjjJ;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4632075 4633091 . - . ID=gene-PUW35_22460;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=PUW35_22460 CP118132.1 Protein Homology CDS 4632075 4633091 . - 0 ID=cds-WJG93137.1;Parent=gene-PUW35_22460;Dbxref=NCBI_GP:WJG93137.1;Name=WJG93137.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=PUW35_22460;product=lipoate--protein ligase LplA;protein_id=WJG93137.1;transl_table=11 CP118132.1 Genbank gene 4633125 4633769 . - . ID=gene-PUW35_22465;Name=PUW35_22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22465 CP118132.1 Protein Homology CDS 4633125 4633769 . - 0 ID=cds-WJG93138.1;Parent=gene-PUW35_22465;Dbxref=NCBI_GP:WJG93138.1;Name=WJG93138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=PUW35_22465;product=YtjB family periplasmic protein;protein_id=WJG93138.1;transl_table=11 CP118132.1 Genbank gene 4633886 4634854 . + . ID=gene-PUW35_22470;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PUW35_22470 CP118132.1 Protein Homology CDS 4633886 4634854 . + 0 ID=cds-WJG93139.1;Parent=gene-PUW35_22470;Dbxref=NCBI_GP:WJG93139.1;Name=WJG93139.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=PUW35_22470;product=phosphoserine phosphatase;protein_id=WJG93139.1;transl_table=11 CP118132.1 Genbank gene 4634938 4636320 . + . ID=gene-PUW35_22475;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=PUW35_22475 CP118132.1 Protein Homology CDS 4634938 4636320 . + 0 ID=cds-WJG93140.1;Parent=gene-PUW35_22475;Dbxref=NCBI_GP:WJG93140.1;Name=WJG93140.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=PUW35_22475;product=DNA repair protein RadA;protein_id=WJG93140.1;transl_table=11 CP118132.1 Genbank pseudogene 4636471 4637702 . + . ID=gene-PUW35_22480;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=pseudogene;locus_tag=PUW35_22480;pseudo=true CP118132.1 Protein Homology CDS 4636471 4637702 . + 0 ID=cds-PUW35_22480;Parent=gene-PUW35_22480;Note=frameshifted;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=PUW35_22480;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4637820 4639487 . - . ID=gene-PUW35_22485;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=PUW35_22485 CP118132.1 Protein Homology CDS 4637820 4639487 . - 0 ID=cds-WJG93141.1;Parent=gene-PUW35_22485;Dbxref=NCBI_GP:WJG93141.1;Name=WJG93141.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=PUW35_22485;product=energy-dependent translational throttle protein EttA;protein_id=WJG93141.1;transl_table=11 CP118132.1 Genbank gene 4639696 4641633 . + . ID=gene-PUW35_22490;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=PUW35_22490 CP118132.1 Protein Homology CDS 4639696 4641633 . + 0 ID=cds-WJG93142.1;Parent=gene-PUW35_22490;Dbxref=NCBI_GP:WJG93142.1;Name=WJG93142.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=PUW35_22490;product=murein transglycosylase;protein_id=WJG93142.1;transl_table=11 CP118132.1 Genbank gene 4641691 4642017 . + . ID=gene-PUW35_22495;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=PUW35_22495 CP118132.1 Protein Homology CDS 4641691 4642017 . + 0 ID=cds-WJG93143.1;Parent=gene-PUW35_22495;Dbxref=NCBI_GP:WJG93143.1;Name=WJG93143.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=PUW35_22495;product=trp operon repressor;protein_id=WJG93143.1;transl_table=11 CP118132.1 Genbank gene 4642119 4642634 . - . ID=gene-PUW35_22500;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=PUW35_22500 CP118132.1 Protein Homology CDS 4642119 4642634 . - 0 ID=cds-WJG93144.1;Parent=gene-PUW35_22500;Dbxref=NCBI_GP:WJG93144.1;Name=WJG93144.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=PUW35_22500;product=inosine/xanthosine triphosphatase;protein_id=WJG93144.1;transl_table=11 CP118132.1 Genbank gene 4642683 4643330 . + . ID=gene-PUW35_22505;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=PUW35_22505 CP118132.1 Protein Homology CDS 4642683 4643330 . + 0 ID=cds-WJG93145.1;Parent=gene-PUW35_22505;Dbxref=NCBI_GP:WJG93145.1;Name=WJG93145.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=PUW35_22505;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WJG93145.1;transl_table=11 CP118132.1 Genbank gene 4643327 4644196 . - . ID=gene-PUW35_22510;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=PUW35_22510 CP118132.1 Protein Homology CDS 4643327 4644196 . - 0 ID=cds-WJG93146.1;Parent=gene-PUW35_22510;Dbxref=NCBI_GP:WJG93146.1;Name=WJG93146.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=PUW35_22510;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WJG93146.1;transl_table=11 CP118132.1 Genbank gene 4644408 4644881 . + . ID=gene-PUW35_22515;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=PUW35_22515 CP118132.1 Protein Homology CDS 4644408 4644881 . + 0 ID=cds-WJG93147.1;Parent=gene-PUW35_22515;Dbxref=NCBI_GP:WJG93147.1;Name=WJG93147.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=PUW35_22515;product=protein CreA;protein_id=WJG93147.1;transl_table=11 CP118132.1 Genbank gene 4644894 4645583 . + . ID=gene-PUW35_22520;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=PUW35_22520 CP118132.1 Protein Homology CDS 4644894 4645583 . + 0 ID=cds-WJG95179.1;Parent=gene-PUW35_22520;Dbxref=NCBI_GP:WJG95179.1;Name=WJG95179.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=PUW35_22520;product=two-component system response regulator CreB;protein_id=WJG95179.1;transl_table=11 CP118132.1 Genbank gene 4645583 4647007 . + . ID=gene-PUW35_22525;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=PUW35_22525 CP118132.1 Protein Homology CDS 4645583 4647007 . + 0 ID=cds-WJG93148.1;Parent=gene-PUW35_22525;Dbxref=NCBI_GP:WJG93148.1;Name=WJG93148.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=PUW35_22525;product=two-component system sensor histidine kinase CreC;protein_id=WJG93148.1;transl_table=11 CP118132.1 Genbank gene 4647065 4648414 . + . ID=gene-PUW35_22530;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=PUW35_22530 CP118132.1 Protein Homology CDS 4647065 4648414 . + 0 ID=cds-WJG93149.1;Parent=gene-PUW35_22530;Dbxref=NCBI_GP:WJG93149.1;Name=WJG93149.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=PUW35_22530;product=cell envelope integrity protein CreD;protein_id=WJG93149.1;transl_table=11 CP118132.1 Genbank pseudogene 4648471 4649518 . - . ID=gene-PUW35_22535;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=pseudogene;locus_tag=PUW35_22535;pseudo=true CP118132.1 Protein Homology CDS 4648471 4649518 . - 0 ID=cds-PUW35_22535;Parent=gene-PUW35_22535;Note=frameshifted;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=PUW35_22535;product=fimbrial major subunit SthE;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4649559 4650116 . - . ID=gene-PUW35_22540;Name=PUW35_22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22540 CP118132.1 Protein Homology CDS 4649559 4650116 . - 0 ID=cds-WJG93150.1;Parent=gene-PUW35_22540;Dbxref=NCBI_GP:WJG93150.1;Name=WJG93150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=PUW35_22540;product=fimbrial protein;protein_id=WJG93150.1;transl_table=11 CP118132.1 Genbank gene 4650134 4652671 . - . ID=gene-PUW35_22545;Name=PUW35_22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22545 CP118132.1 Protein Homology CDS 4650134 4652671 . - 0 ID=cds-WJG93151.1;Parent=gene-PUW35_22545;Dbxref=NCBI_GP:WJG93151.1;Name=WJG93151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=PUW35_22545;product=fimbrial outer membrane usher protein;protein_id=WJG93151.1;transl_table=11 CP118132.1 Genbank pseudogene 4652717 4653400 . - . ID=gene-PUW35_22550;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=pseudogene;locus_tag=PUW35_22550;pseudo=true CP118132.1 Protein Homology CDS 4652717 4653400 . - 0 ID=cds-PUW35_22550;Parent=gene-PUW35_22550;Note=internal stop;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=PUW35_22550;product=fimbrial biogenesis chaperone SthA;pseudo=true;transl_table=11 CP118132.1 Genbank gene 4653471 4654016 . - . ID=gene-PUW35_22555;Name=PUW35_22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22555 CP118132.1 Protein Homology CDS 4653471 4654016 . - 0 ID=cds-WJG93152.1;Parent=gene-PUW35_22555;Dbxref=NCBI_GP:WJG93152.1;Name=WJG93152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=PUW35_22555;product=fimbrial protein;protein_id=WJG93152.1;transl_table=11 CP118132.1 Genbank gene 4654355 4655026 . - . ID=gene-PUW35_22560;Name=PUW35_22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22560 CP118132.1 Protein Homology CDS 4654355 4655026 . - 0 ID=cds-WJG93153.1;Parent=gene-PUW35_22560;Dbxref=NCBI_GP:WJG93153.1;Name=WJG93153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=PUW35_22560;product=helix-turn-helix domain-containing protein;protein_id=WJG93153.1;transl_table=11 CP118132.1 Genbank gene 4655411 4655725 . - . ID=gene-PUW35_22565;Name=PUW35_22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22565 CP118132.1 Protein Homology CDS 4655411 4655725 . - 0 ID=cds-WJG93154.1;Parent=gene-PUW35_22565;Dbxref=NCBI_GP:WJG93154.1;Name=WJG93154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=PUW35_22565;product=hypothetical protein;protein_id=WJG93154.1;transl_table=11 CP118132.1 Genbank gene 4655992 4656708 . - . ID=gene-PUW35_22570;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=PUW35_22570 CP118132.1 Protein Homology CDS 4655992 4656708 . - 0 ID=cds-WJG93155.1;Parent=gene-PUW35_22570;Dbxref=NCBI_GP:WJG93155.1;Name=WJG93155.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=PUW35_22570;product=two-component system response regulator ArcA;protein_id=WJG93155.1;transl_table=11 CP118132.1 Genbank gene 4656804 4656944 . + . ID=gene-PUW35_22575;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=PUW35_22575 CP118132.1 Protein Homology CDS 4656804 4656944 . + 0 ID=cds-WJG93156.1;Parent=gene-PUW35_22575;Dbxref=NCBI_GP:WJG93156.1;Name=WJG93156.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=PUW35_22575;product=protein YjjY;protein_id=WJG93156.1;transl_table=11 CP118132.1 Genbank gene 4657344 4658030 . + . ID=gene-PUW35_22580;Name=PUW35_22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22580 CP118132.1 Protein Homology CDS 4657344 4658030 . + 0 ID=cds-WJG93157.1;Parent=gene-PUW35_22580;Dbxref=NCBI_GP:WJG93157.1;Name=WJG93157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=PUW35_22580;product=tRNA/rRNA methyltransferase;protein_id=WJG93157.1;transl_table=11 ##sequence-region CP118133.1 1 88336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=594 CP118133.1 Genbank region 1 88336 . + . ID=CP118133.1:1..88336;Dbxref=taxon:594;Is_circular=true;Name=unnamed;collection-date=2017-06-09;country=South Africa: KwaZulu-Natal;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Gallus gallus domesticus;plasmid-name=unnamed;serovar=Gallinarum;strain=ZA_432755;sub-species=enterica CP118133.1 Genbank gene 154 834 . - . ID=gene-PUW35_22590;Name=PUW35_22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22590 CP118133.1 Protein Homology CDS 154 834 . - 0 ID=cds-WJG95225.1;Parent=gene-PUW35_22590;Dbxref=NCBI_GP:WJG95225.1;Name=WJG95225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490548.1;locus_tag=PUW35_22590;product=DNA methylase;protein_id=WJG95225.1;transl_table=11 CP118133.1 Genbank gene 997 1278 . + . ID=gene-PUW35_22595;Name=PUW35_22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22595 CP118133.1 Protein Homology CDS 997 1278 . + 0 ID=cds-WJG95226.1;Parent=gene-PUW35_22595;Dbxref=NCBI_GP:WJG95226.1;Name=WJG95226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134757.1;locus_tag=PUW35_22595;product=hypothetical protein;protein_id=WJG95226.1;transl_table=11 CP118133.1 Genbank gene 1216 1572 . - . ID=gene-PUW35_22600;Name=PUW35_22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22600 CP118133.1 Protein Homology CDS 1216 1572 . - 0 ID=cds-WJG95227.1;Parent=gene-PUW35_22600;Dbxref=NCBI_GP:WJG95227.1;Name=WJG95227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490547.1;locus_tag=PUW35_22600;product=hypothetical protein;protein_id=WJG95227.1;transl_table=11 CP118133.1 Genbank gene 1565 2035 . - . ID=gene-PUW35_22605;Name=PUW35_22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22605 CP118133.1 Protein Homology CDS 1565 2035 . - 0 ID=cds-WJG95228.1;Parent=gene-PUW35_22605;Dbxref=NCBI_GP:WJG95228.1;Name=WJG95228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490546.1;locus_tag=PUW35_22605;product=hypothetical protein;protein_id=WJG95228.1;transl_table=11 CP118133.1 Genbank gene 2546 2968 . + . ID=gene-PUW35_22610;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PUW35_22610 CP118133.1 Protein Homology CDS 2546 2968 . + 0 ID=cds-WJG95229.1;Parent=gene-PUW35_22610;Dbxref=NCBI_GP:WJG95229.1;Name=WJG95229.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490545.1;locus_tag=PUW35_22610;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WJG95229.1;transl_table=11 CP118133.1 Genbank pseudogene 2968 4242 . + . ID=gene-PUW35_22615;Name=PUW35_22615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22615;pseudo=true CP118133.1 Protein Homology CDS 2968 4242 . + 0 ID=cds-PUW35_22615;Parent=gene-PUW35_22615;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490544.1;locus_tag=PUW35_22615;product=Y-family DNA polymerase;pseudo=true;transl_table=11 CP118133.1 Genbank gene 4324 5298 . - . ID=gene-PUW35_22620;Name=PUW35_22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22620 CP118133.1 Protein Homology CDS 4324 5298 . - 0 ID=cds-WJG95230.1;Parent=gene-PUW35_22620;Dbxref=NCBI_GP:WJG95230.1;Name=WJG95230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229774.1;locus_tag=PUW35_22620;product=ParB family protein;protein_id=WJG95230.1;transl_table=11 CP118133.1 Genbank gene 5298 6503 . - . ID=gene-PUW35_22625;Name=PUW35_22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22625 CP118133.1 Protein Homology CDS 5298 6503 . - 0 ID=cds-WJG95231.1;Parent=gene-PUW35_22625;Dbxref=NCBI_GP:WJG95231.1;Name=WJG95231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490542.1;locus_tag=PUW35_22625;product=AAA family ATPase;protein_id=WJG95231.1;transl_table=11 CP118133.1 Genbank gene 6918 7859 . + . ID=gene-PUW35_22630;Name=PUW35_22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22630 CP118133.1 Protein Homology CDS 6918 7859 . + 0 ID=cds-WJG95232.1;Parent=gene-PUW35_22630;Dbxref=NCBI_GP:WJG95232.1;Name=WJG95232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=PUW35_22630;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJG95232.1;transl_table=11 CP118133.1 Genbank pseudogene 7856 8457 . - . ID=gene-PUW35_22635;Name=PUW35_22635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22635;pseudo=true CP118133.1 Protein Homology CDS 7856 8457 . - 0 ID=cds-PUW35_22635;Parent=gene-PUW35_22635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1;locus_tag=PUW35_22635;product=DUF2913 family protein;pseudo=true;transl_table=11 CP118133.1 Genbank gene 8514 8930 . - . ID=gene-PUW35_22640;Name=PUW35_22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22640 CP118133.1 Protein Homology CDS 8514 8930 . - 0 ID=cds-WJG95233.1;Parent=gene-PUW35_22640;Dbxref=NCBI_GP:WJG95233.1;Name=WJG95233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988947.1;locus_tag=PUW35_22640;product=hypothetical protein;protein_id=WJG95233.1;transl_table=11 CP118133.1 Genbank gene 9033 9449 . - . ID=gene-PUW35_22645;Name=PUW35_22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22645 CP118133.1 Protein Homology CDS 9033 9449 . - 0 ID=cds-WJG95271.1;Parent=gene-PUW35_22645;Dbxref=NCBI_GP:WJG95271.1;Name=WJG95271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490539.1;locus_tag=PUW35_22645;product=hypothetical protein;protein_id=WJG95271.1;transl_table=11 CP118133.1 Genbank pseudogene 9535 10649 . - . ID=gene-PUW35_22650;Name=PUW35_22650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22650;pseudo=true CP118133.1 Protein Homology CDS 9535 10649 . - 0 ID=cds-PUW35_22650;Parent=gene-PUW35_22650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490538.1;locus_tag=PUW35_22650;product=DNA-binding protein;pseudo=true;transl_table=11 CP118133.1 Genbank gene 10908 11396 . + . ID=gene-PUW35_22655;Name=PUW35_22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22655 CP118133.1 Protein Homology CDS 10908 11396 . + 0 ID=cds-WJG95234.1;Parent=gene-PUW35_22655;Dbxref=NCBI_GP:WJG95234.1;Name=WJG95234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490537.1;locus_tag=PUW35_22655;product=cytoplasmic protein;protein_id=WJG95234.1;transl_table=11 CP118133.1 Genbank gene 12051 12791 . + . ID=gene-PUW35_22660;Name=PUW35_22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22660 CP118133.1 Protein Homology CDS 12051 12791 . + 0 ID=cds-WJG95235.1;Parent=gene-PUW35_22660;Dbxref=NCBI_GP:WJG95235.1;Name=WJG95235.1;Ontology_term=GO:0004089;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490536.1;locus_tag=PUW35_22660;product=carbonic anhydrase family protein;protein_id=WJG95235.1;transl_table=11 CP118133.1 Genbank gene 12998 13558 . + . ID=gene-PUW35_22665;Name=PUW35_22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22665 CP118133.1 Protein Homology CDS 12998 13558 . + 0 ID=cds-WJG95236.1;Parent=gene-PUW35_22665;Dbxref=NCBI_GP:WJG95236.1;Name=WJG95236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490535.1;locus_tag=PUW35_22665;product=recombinase family protein;protein_id=WJG95236.1;transl_table=11 CP118133.1 Genbank gene 13542 15206 . + . ID=gene-PUW35_22670;Name=PUW35_22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22670 CP118133.1 Protein Homology CDS 13542 15206 . + 0 ID=cds-WJG95237.1;Parent=gene-PUW35_22670;Dbxref=NCBI_GP:WJG95237.1;Name=WJG95237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490534.1;locus_tag=PUW35_22670;product=IS481 family transposase;protein_id=WJG95237.1;transl_table=11 CP118133.1 Genbank gene 15139 16164 . + . ID=gene-PUW35_22675;Name=PUW35_22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22675 CP118133.1 Protein Homology CDS 15139 16164 . + 0 ID=cds-WJG95238.1;Parent=gene-PUW35_22675;Dbxref=NCBI_GP:WJG95238.1;Name=WJG95238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490533.1;locus_tag=PUW35_22675;product=ExeA family protein;protein_id=WJG95238.1;transl_table=11 CP118133.1 Genbank gene 16353 17390 . - . ID=gene-PUW35_22680;Name=PUW35_22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22680 CP118133.1 Protein Homology CDS 16353 17390 . - 0 ID=cds-WJG95239.1;Parent=gene-PUW35_22680;Dbxref=NCBI_GP:WJG95239.1;Name=WJG95239.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490532.1;locus_tag=PUW35_22680;product=IS630 family transposase;protein_id=WJG95239.1;transl_table=11 CP118133.1 Genbank gene 17997 18890 . + . ID=gene-PUW35_22685;Name=spvR;gbkey=Gene;gene=spvR;gene_biotype=protein_coding;locus_tag=PUW35_22685 CP118133.1 Protein Homology CDS 17997 18890 . + 0 ID=cds-WJG95272.1;Parent=gene-PUW35_22685;Dbxref=NCBI_GP:WJG95272.1;Name=WJG95272.1;gbkey=CDS;gene=spvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490531.1;locus_tag=PUW35_22685;product=virulence genes transcriptional activator SpvR;protein_id=WJG95272.1;transl_table=11 CP118133.1 Genbank gene 19064 19228 . + . ID=gene-PUW35_22690;Name=PUW35_22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22690 CP118133.1 Protein Homology CDS 19064 19228 . + 0 ID=cds-WJG95240.1;Parent=gene-PUW35_22690;Dbxref=NCBI_GP:WJG95240.1;Name=WJG95240.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576629.1;locus_tag=PUW35_22690;product=glycoside hydrolase family protein;protein_id=WJG95240.1;transl_table=11 CP118133.1 Genbank gene 19402 20169 . + . ID=gene-PUW35_22695;Name=spvA;gbkey=Gene;gene=spvA;gene_biotype=protein_coding;locus_tag=PUW35_22695 CP118133.1 Protein Homology CDS 19402 20169 . + 0 ID=cds-WJG95241.1;Parent=gene-PUW35_22695;Dbxref=NCBI_GP:WJG95241.1;Name=WJG95241.1;gbkey=CDS;gene=spvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490530.1;locus_tag=PUW35_22695;product=virulence protein SpvA;protein_id=WJG95241.1;transl_table=11 CP118133.1 Genbank gene 20132 20299 . + . ID=gene-PUW35_22700;Name=PUW35_22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22700 CP118133.1 GeneMarkS-2+ CDS 20132 20299 . + 0 ID=cds-WJG95273.1;Parent=gene-PUW35_22700;Dbxref=NCBI_GP:WJG95273.1;Name=WJG95273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_22700;product=hypothetical protein;protein_id=WJG95273.1;transl_table=11 CP118133.1 Genbank gene 20351 22132 . + . ID=gene-PUW35_22705;Name=spvB;gbkey=Gene;gene=spvB;gene_biotype=protein_coding;locus_tag=PUW35_22705 CP118133.1 Protein Homology CDS 20351 22132 . + 0 ID=cds-WJG95242.1;Parent=gene-PUW35_22705;Dbxref=NCBI_GP:WJG95242.1;Name=WJG95242.1;gbkey=CDS;gene=spvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490529.1;locus_tag=PUW35_22705;product=SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB;protein_id=WJG95242.1;transl_table=11 CP118133.1 Genbank pseudogene 22413 23137 . + . ID=gene-PUW35_22710;Name=spvC;gbkey=Gene;gene=spvC;gene_biotype=pseudogene;locus_tag=PUW35_22710;pseudo=true CP118133.1 Protein Homology CDS 22413 23137 . + 0 ID=cds-PUW35_22710;Parent=gene-PUW35_22710;Note=frameshifted;gbkey=CDS;gene=spvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490528.1;locus_tag=PUW35_22710;product=type III secretion system effector phosphothreonine lyase SpvC;pseudo=true;transl_table=11 CP118133.1 Genbank gene 24193 24606 . - . ID=gene-PUW35_22715;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PUW35_22715 CP118133.1 Protein Homology CDS 24193 24606 . - 0 ID=cds-WJG95243.1;Parent=gene-PUW35_22715;Dbxref=NCBI_GP:WJG95243.1;Name=WJG95243.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064919.1;locus_tag=PUW35_22715;product=IS200/IS605 family transposase;protein_id=WJG95243.1;transl_table=11 CP118133.1 Genbank gene 24663 25013 . + . ID=gene-PUW35_22720;Name=PUW35_22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22720 CP118133.1 Protein Homology CDS 24663 25013 . + 0 ID=cds-WJG95244.1;Parent=gene-PUW35_22720;Dbxref=NCBI_GP:WJG95244.1;Name=WJG95244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490525.1;locus_tag=PUW35_22720;product=transposase;protein_id=WJG95244.1;transl_table=11 CP118133.1 Genbank gene 25080 25631 . - . ID=gene-PUW35_22725;Name=PUW35_22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22725 CP118133.1 Protein Homology CDS 25080 25631 . - 0 ID=cds-WJG95268.1;Parent=gene-PUW35_22725;Dbxref=NCBI_GP:WJG95268.1;Name=WJG95268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490524.1;locus_tag=PUW35_22725;product=inverse autotransporter beta domain-containing protein;protein_id=WJG95268.1;transl_table=11 CP118133.1 Genbank gene 25520 25849 . - . ID=gene-PUW35_22730;Name=PUW35_22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22730 CP118133.1 GeneMarkS-2+ CDS 25520 25849 . - 0 ID=cds-WJG95245.1;Parent=gene-PUW35_22730;Dbxref=NCBI_GP:WJG95245.1;Name=WJG95245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_22730;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WJG95245.1;transl_table=11 CP118133.1 Genbank pseudogene 26366 26828 . - . ID=gene-PUW35_22735;Name=PUW35_22735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22735;pseudo=true CP118133.1 Protein Homology CDS 26366 26828 . - 0 ID=cds-PUW35_22735;Parent=gene-PUW35_22735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490523.1;locus_tag=PUW35_22735;product=hypothetical protein;pseudo=true;transl_table=11 CP118133.1 Genbank gene 26822 27310 . - . ID=gene-PUW35_22740;Name=PUW35_22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22740 CP118133.1 Protein Homology CDS 26822 27310 . - 0 ID=cds-WJG95246.1;Parent=gene-PUW35_22740;Dbxref=NCBI_GP:WJG95246.1;Name=WJG95246.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075507.1;locus_tag=PUW35_22740;product=CaiF/GrlA family transcriptional regulator;protein_id=WJG95246.1;transl_table=11 CP118133.1 Genbank gene 27496 28047 . - . ID=gene-PUW35_22745;Name=PUW35_22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22745 CP118133.1 Protein Homology CDS 27496 28047 . - 0 ID=cds-WJG95247.1;Parent=gene-PUW35_22745;Dbxref=NCBI_GP:WJG95247.1;Name=WJG95247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=PUW35_22745;product=EAL domain-containing protein;protein_id=WJG95247.1;transl_table=11 CP118133.1 Genbank gene 28056 28838 . - . ID=gene-PUW35_22750;Name=PUW35_22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22750 CP118133.1 Protein Homology CDS 28056 28838 . - 0 ID=cds-WJG95248.1;Parent=gene-PUW35_22750;Dbxref=NCBI_GP:WJG95248.1;Name=WJG95248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490521.1;locus_tag=PUW35_22750;product=site-specific integrase;protein_id=WJG95248.1;transl_table=11 CP118133.1 Genbank gene 28873 29394 . - . ID=gene-PUW35_22755;Name=PUW35_22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22755 CP118133.1 Protein Homology CDS 28873 29394 . - 0 ID=cds-WJG95249.1;Parent=gene-PUW35_22755;Dbxref=NCBI_GP:WJG95249.1;Name=WJG95249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490520.1;locus_tag=PUW35_22755;product=cytoplasmic protein;protein_id=WJG95249.1;transl_table=11 CP118133.1 Genbank gene 29391 29681 . - . ID=gene-PUW35_22760;Name=PUW35_22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22760 CP118133.1 Protein Homology CDS 29391 29681 . - 0 ID=cds-WJG95250.1;Parent=gene-PUW35_22760;Dbxref=NCBI_GP:WJG95250.1;Name=WJG95250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490519.1;locus_tag=PUW35_22760;product=cytoplasmic protein;protein_id=WJG95250.1;transl_table=11 CP118133.1 Genbank gene 29683 29988 . - . ID=gene-PUW35_22765;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=PUW35_22765 CP118133.1 Protein Homology CDS 29683 29988 . - 0 ID=cds-WJG95251.1;Parent=gene-PUW35_22765;Dbxref=NCBI_GP:WJG95251.1;Name=WJG95251.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490518.1;locus_tag=PUW35_22765;product=type II toxin-antitoxin system toxin CcdB;protein_id=WJG95251.1;transl_table=11 CP118133.1 Genbank gene 29990 30208 . - . ID=gene-PUW35_22770;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=PUW35_22770 CP118133.1 Protein Homology CDS 29990 30208 . - 0 ID=cds-WJG95252.1;Parent=gene-PUW35_22770;Dbxref=NCBI_GP:WJG95252.1;Name=WJG95252.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490517.1;locus_tag=PUW35_22770;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WJG95252.1;transl_table=11 CP118133.1 Genbank gene 30953 31183 . + . ID=gene-PUW35_22775;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=PUW35_22775 CP118133.1 Protein Homology CDS 30953 31183 . + 0 ID=cds-WJG95253.1;Parent=gene-PUW35_22775;Dbxref=NCBI_GP:WJG95253.1;Name=WJG95253.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=PUW35_22775;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WJG95253.1;transl_table=11 CP118133.1 Genbank gene 31180 31608 . + . ID=gene-PUW35_22780;Name=PUW35_22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22780 CP118133.1 Protein Homology CDS 31180 31608 . + 0 ID=cds-WJG95254.1;Parent=gene-PUW35_22780;Dbxref=NCBI_GP:WJG95254.1;Name=WJG95254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000812999.1;locus_tag=PUW35_22780;product=type II toxin-antitoxin system VapC family toxin;protein_id=WJG95254.1;transl_table=11 CP118133.1 Genbank gene 32178 33026 . - . ID=gene-PUW35_22785;Name=PUW35_22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22785 CP118133.1 Protein Homology CDS 32178 33026 . - 0 ID=cds-WJG95255.1;Parent=gene-PUW35_22785;Dbxref=NCBI_GP:WJG95255.1;Name=WJG95255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=PUW35_22785;product=SdiA-regulated domain-containing protein;protein_id=WJG95255.1;transl_table=11 CP118133.1 Genbank gene 33052 33213 . - . ID=gene-PUW35_22790;Name=PUW35_22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22790 CP118133.1 GeneMarkS-2+ CDS 33052 33213 . - 0 ID=cds-WJG95274.1;Parent=gene-PUW35_22790;Dbxref=NCBI_GP:WJG95274.1;Name=WJG95274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_22790;product=hypothetical protein;protein_id=WJG95274.1;transl_table=11 CP118133.1 Genbank gene 33474 33686 . - . ID=gene-PUW35_22795;Name=PUW35_22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22795 CP118133.1 Protein Homology CDS 33474 33686 . - 0 ID=cds-WJG95256.1;Parent=gene-PUW35_22795;Dbxref=NCBI_GP:WJG95256.1;Name=WJG95256.1;Ontology_term=GO:0006355,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063796.1;locus_tag=PUW35_22795;product=FaeA/PapI family transcriptional regulator;protein_id=WJG95256.1;transl_table=11 CP118133.1 Genbank gene 33759 34343 . - . ID=gene-PUW35_22800;Name=PUW35_22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22800 CP118133.1 Protein Homology CDS 33759 34343 . - 0 ID=cds-WJG95257.1;Parent=gene-PUW35_22800;Dbxref=NCBI_GP:WJG95257.1;Name=WJG95257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=PUW35_22800;product=hypothetical protein;protein_id=WJG95257.1;transl_table=11 CP118133.1 Genbank gene 34468 35181 . - . ID=gene-PUW35_22805;Name=PUW35_22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22805 CP118133.1 Protein Homology CDS 34468 35181 . - 0 ID=cds-WJG95258.1;Parent=gene-PUW35_22805;Dbxref=NCBI_GP:WJG95258.1;Name=WJG95258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801115.1;locus_tag=PUW35_22805;product=fimbrial protein;protein_id=WJG95258.1;transl_table=11 CP118133.1 Genbank gene 35181 35456 . - . ID=gene-PUW35_22810;Name=PUW35_22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22810 CP118133.1 Protein Homology CDS 35181 35456 . - 0 ID=cds-WJG95259.1;Parent=gene-PUW35_22810;Dbxref=NCBI_GP:WJG95259.1;Name=WJG95259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020576.1;locus_tag=PUW35_22810;product=hypothetical protein;protein_id=WJG95259.1;transl_table=11 CP118133.1 Genbank gene 35443 36207 . - . ID=gene-PUW35_22815;Name=PUW35_22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22815 CP118133.1 Protein Homology CDS 35443 36207 . - 0 ID=cds-WJG95260.1;Parent=gene-PUW35_22815;Dbxref=NCBI_GP:WJG95260.1;Name=WJG95260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000827659.1;locus_tag=PUW35_22815;product=fimbrial protein;protein_id=WJG95260.1;transl_table=11 CP118133.1 Genbank gene 36235 37032 . - . ID=gene-PUW35_22820;Name=faeH;gbkey=Gene;gene=faeH;gene_biotype=protein_coding;locus_tag=PUW35_22820 CP118133.1 Protein Homology CDS 36235 37032 . - 0 ID=cds-WJG95261.1;Parent=gene-PUW35_22820;Dbxref=NCBI_GP:WJG95261.1;Name=WJG95261.1;gbkey=CDS;gene=faeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704720.1;locus_tag=PUW35_22820;product=F4 (K88) fimbria minor subunit FaeH;protein_id=WJG95261.1;transl_table=11 CP118133.1 Genbank gene 37268 37540 . - . ID=gene-PUW35_22825;Name=PUW35_22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22825 CP118133.1 GeneMarkS-2+ CDS 37268 37540 . - 0 ID=cds-WJG95262.1;Parent=gene-PUW35_22825;Dbxref=NCBI_GP:WJG95262.1;Name=WJG95262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_22825;product=hypothetical protein;protein_id=WJG95262.1;transl_table=11 CP118133.1 Genbank gene 38999 39658 . + . ID=gene-PUW35_22830;Name=PUW35_22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22830 CP118133.1 Protein Homology CDS 38999 39658 . + 0 ID=cds-WJG95263.1;Parent=gene-PUW35_22830;Dbxref=NCBI_GP:WJG95263.1;Name=WJG95263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575507.1;locus_tag=PUW35_22830;product=fimbrial protein;protein_id=WJG95263.1;transl_table=11 CP118133.1 Genbank gene 39810 40541 . + . ID=gene-PUW35_22835;Name=PUW35_22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22835 CP118133.1 GeneMarkS-2+ CDS 39810 40541 . + 0 ID=cds-WJG95264.1;Parent=gene-PUW35_22835;Dbxref=NCBI_GP:WJG95264.1;Name=WJG95264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_22835;product=hypothetical protein;protein_id=WJG95264.1;transl_table=11 CP118133.1 Genbank gene 40708 40905 . + . ID=gene-PUW35_22840;Name=PUW35_22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22840 CP118133.1 Protein Homology CDS 40708 40905 . + 0 ID=cds-WJG95265.1;Parent=gene-PUW35_22840;Dbxref=NCBI_GP:WJG95265.1;Name=WJG95265.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=PUW35_22840;product=transposase;protein_id=WJG95265.1;transl_table=11 CP118133.1 Genbank pseudogene 41060 41274 . + . ID=gene-PUW35_22845;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=PUW35_22845;pseudo=true CP118133.1 Protein Homology CDS 41060 41274 . + 0 ID=cds-PUW35_22845;Parent=gene-PUW35_22845;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=PUW35_22845;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 CP118133.1 Genbank pseudogene 41266 41670 . + . ID=gene-PUW35_22850;Name=PUW35_22850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22850;pseudo=true CP118133.1 Protein Homology CDS 41266 41670 . + 0 ID=cds-PUW35_22850;Parent=gene-PUW35_22850;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=PUW35_22850;product=IS66 family transposase zinc-finger binding domain-containing protein;pseudo=true;transl_table=11 CP118133.1 Genbank gene 42464 43345 . - . ID=gene-PUW35_22855;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PUW35_22855 CP118133.1 Protein Homology CDS 42464 43345 . - 0 ID=cds-WJG95266.1;Parent=gene-PUW35_22855;Dbxref=NCBI_GP:WJG95266.1;Name=WJG95266.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=PUW35_22855;product=incFII family plasmid replication initiator RepA;protein_id=WJG95266.1;transl_table=11 CP118133.1 Genbank gene 43326 43403 . - . ID=gene-PUW35_22860;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=PUW35_22860 CP118133.1 Protein Homology CDS 43326 43403 . - 0 ID=cds-WJG95269.1;Parent=gene-PUW35_22860;Dbxref=NCBI_GP:WJG95269.1;Name=WJG95269.1;Ontology_term=GO:0006276,GO:0003674;gbkey=CDS;gene=tap;go_function=molecular_function|0003674||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490497.1;locus_tag=PUW35_22860;product=RepA leader peptide Tap;protein_id=WJG95269.1;transl_table=11 CP118133.1 Genbank gene 43651 43917 . - . ID=gene-PUW35_22865;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PUW35_22865 CP118133.1 Protein Homology CDS 43651 43917 . - 0 ID=cds-WJG95267.1;Parent=gene-PUW35_22865;Dbxref=NCBI_GP:WJG95267.1;Name=WJG95267.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490495.1;locus_tag=PUW35_22865;product=replication regulatory protein RepA;protein_id=WJG95267.1;transl_table=11 CP118133.1 Genbank pseudogene 44028 44595 . - . ID=gene-PUW35_22870;Name=PUW35_22870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22870;pseudo=true CP118133.1 Protein Homology CDS 44028 44595 . - 0 ID=cds-PUW35_22870;Parent=gene-PUW35_22870;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242133.1;locus_tag=PUW35_22870;product=phospholipase D family protein;pseudo=true;transl_table=11 CP118133.1 Genbank pseudogene 44782 44865 . - . ID=gene-PUW35_22875;Name=PUW35_22875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22875;pseudo=true CP118133.1 Protein Homology CDS 44782 44865 . - 0 ID=cds-PUW35_22875;Parent=gene-PUW35_22875;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490493.1;locus_tag=PUW35_22875;product=hypothetical protein;pseudo=true;transl_table=11 CP118133.1 Genbank gene 44982 45545 . - . ID=gene-PUW35_22880;Name=PUW35_22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22880 CP118133.1 Protein Homology CDS 44982 45545 . - 0 ID=cds-WJG95185.1;Parent=gene-PUW35_22880;Dbxref=NCBI_GP:WJG95185.1;Name=WJG95185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490594.1;locus_tag=PUW35_22880;product=fertility inhibition protein FinO;protein_id=WJG95185.1;transl_table=11 CP118133.1 Genbank gene 45600 46340 . - . ID=gene-PUW35_22885;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=PUW35_22885 CP118133.1 Protein Homology CDS 45600 46340 . - 0 ID=cds-WJG95186.1;Parent=gene-PUW35_22885;Dbxref=NCBI_GP:WJG95186.1;Name=WJG95186.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490593.1;locus_tag=PUW35_22885;product=conjugal transfer pilus acetylase TraX;protein_id=WJG95186.1;transl_table=11 CP118133.1 Genbank pseudogene 46360 51617 . - . ID=gene-PUW35_22890;Name=traI;gbkey=Gene;gene=traI;gene_biotype=pseudogene;locus_tag=PUW35_22890;pseudo=true CP118133.1 Protein Homology CDS 46360 51617 . - 0 ID=cds-PUW35_22890;Parent=gene-PUW35_22890;Note=frameshifted;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=PUW35_22890;product=conjugative transfer relaxase/helicase TraI;pseudo=true;transl_table=11 CP118133.1 Genbank gene 51617 53869 . - . ID=gene-PUW35_22895;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=PUW35_22895 CP118133.1 Protein Homology CDS 51617 53869 . - 0 ID=cds-WJG95187.1;Parent=gene-PUW35_22895;Dbxref=NCBI_GP:WJG95187.1;Name=WJG95187.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490588.1;locus_tag=PUW35_22895;product=type IV conjugative transfer system coupling protein TraD;protein_id=WJG95187.1;transl_table=11 CP118133.1 Genbank gene 54246 54977 . - . ID=gene-PUW35_22900;Name=PUW35_22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22900 CP118133.1 Protein Homology CDS 54246 54977 . - 0 ID=cds-WJG95188.1;Parent=gene-PUW35_22900;Dbxref=NCBI_GP:WJG95188.1;Name=WJG95188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=PUW35_22900;product=complement resistance protein TraT;protein_id=WJG95188.1;transl_table=11 CP118133.1 Genbank gene 55223 55705 . - . ID=gene-PUW35_22905;Name=PUW35_22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22905 CP118133.1 Protein Homology CDS 55223 55705 . - 0 ID=cds-WJG95189.1;Parent=gene-PUW35_22905;Dbxref=NCBI_GP:WJG95189.1;Name=WJG95189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787664.1;locus_tag=PUW35_22905;product=surface exclusion protein;protein_id=WJG95189.1;transl_table=11 CP118133.1 Genbank gene 55727 58549 . - . ID=gene-PUW35_22910;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=PUW35_22910 CP118133.1 Protein Homology CDS 55727 58549 . - 0 ID=cds-WJG95190.1;Parent=gene-PUW35_22910;Dbxref=NCBI_GP:WJG95190.1;Name=WJG95190.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007083.1;locus_tag=PUW35_22910;product=conjugal transfer mating pair stabilization protein TraG;protein_id=WJG95190.1;transl_table=11 CP118133.1 Genbank pseudogene 58546 59929 . - . ID=gene-PUW35_22915;Name=PUW35_22915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22915;pseudo=true CP118133.1 Protein Homology CDS 58546 59929 . - 0 ID=cds-PUW35_22915;Parent=gene-PUW35_22915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490584.1;locus_tag=PUW35_22915;product=conjugal transfer protein TraH;pseudo=true;transl_table=11 CP118133.1 Genbank gene 59919 60467 . - . ID=gene-PUW35_22920;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=PUW35_22920 CP118133.1 Protein Homology CDS 59919 60467 . - 0 ID=cds-WJG95191.1;Parent=gene-PUW35_22920;Dbxref=NCBI_GP:WJG95191.1;Name=WJG95191.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490583.1;locus_tag=PUW35_22920;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WJG95191.1;transl_table=11 CP118133.1 Genbank gene 60454 60747 . - . ID=gene-PUW35_22925;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=PUW35_22925 CP118133.1 Protein Homology CDS 60454 60747 . - 0 ID=cds-WJG95192.1;Parent=gene-PUW35_22925;Dbxref=NCBI_GP:WJG95192.1;Name=WJG95192.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490582.1;locus_tag=PUW35_22925;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WJG95192.1;transl_table=11 CP118133.1 Genbank gene 60961 61704 . - . ID=gene-PUW35_22930;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=PUW35_22930 CP118133.1 Protein Homology CDS 60961 61704 . - 0 ID=cds-WJG95193.1;Parent=gene-PUW35_22930;Dbxref=NCBI_GP:WJG95193.1;Name=WJG95193.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490581.1;locus_tag=PUW35_22930;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WJG95193.1;transl_table=11 CP118133.1 Genbank gene 61717 61932 . - . ID=gene-PUW35_22935;Name=PUW35_22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22935 CP118133.1 Protein Homology CDS 61717 61932 . - 0 ID=cds-WJG95194.1;Parent=gene-PUW35_22935;Dbxref=NCBI_GP:WJG95194.1;Name=WJG95194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746544.1;locus_tag=PUW35_22935;product=conjugal transfer protein TrbE;protein_id=WJG95194.1;transl_table=11 CP118133.1 Genbank gene 61943 62419 . - . ID=gene-PUW35_22940;Name=PUW35_22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22940 CP118133.1 Protein Homology CDS 61943 62419 . - 0 ID=cds-WJG95195.1;Parent=gene-PUW35_22940;Dbxref=NCBI_GP:WJG95195.1;Name=WJG95195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746543.1;locus_tag=PUW35_22940;product=hypothetical protein;protein_id=WJG95195.1;transl_table=11 CP118133.1 Genbank gene 62430 64247 . - . ID=gene-PUW35_22945;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=PUW35_22945 CP118133.1 Protein Homology CDS 62430 64247 . - 0 ID=cds-WJG95196.1;Parent=gene-PUW35_22945;Dbxref=NCBI_GP:WJG95196.1;Name=WJG95196.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490579.1;locus_tag=PUW35_22945;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WJG95196.1;transl_table=11 CP118133.1 Genbank pseudogene 64244 64662 . - . ID=gene-PUW35_22950;Name=PUW35_22950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_22950;pseudo=true CP118133.1 Protein Homology CDS 64244 64662 . - 0 ID=cds-PUW35_22950;Parent=gene-PUW35_22950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229397.1;locus_tag=PUW35_22950;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 CP118133.1 Genbank gene 64693 65331 . - . ID=gene-PUW35_22955;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=PUW35_22955 CP118133.1 Protein Homology CDS 64693 65331 . - 0 ID=cds-WJG95197.1;Parent=gene-PUW35_22955;Dbxref=NCBI_GP:WJG95197.1;Name=WJG95197.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490578.1;locus_tag=PUW35_22955;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WJG95197.1;transl_table=11 CP118133.1 Genbank gene 65316 65624 . - . ID=gene-PUW35_22960;Name=PUW35_22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22960 CP118133.1 Protein Homology CDS 65316 65624 . - 0 ID=cds-WJG95198.1;Parent=gene-PUW35_22960;Dbxref=NCBI_GP:WJG95198.1;Name=WJG95198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490577.1;locus_tag=PUW35_22960;product=hypothetical protein;protein_id=WJG95198.1;transl_table=11 CP118133.1 Genbank gene 65643 66635 . - . ID=gene-PUW35_22965;Name=PUW35_22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22965 CP118133.1 Protein Homology CDS 65643 66635 . - 0 ID=cds-WJG95199.1;Parent=gene-PUW35_22965;Dbxref=NCBI_GP:WJG95199.1;Name=WJG95199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=PUW35_22965;product=conjugal transfer pilus assembly protein TraU;protein_id=WJG95199.1;transl_table=11 CP118133.1 Genbank gene 66632 67264 . - . ID=gene-PUW35_22970;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=PUW35_22970 CP118133.1 Protein Homology CDS 66632 67264 . - 0 ID=cds-WJG95200.1;Parent=gene-PUW35_22970;Dbxref=NCBI_GP:WJG95200.1;Name=WJG95200.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=PUW35_22970;product=type-F conjugative transfer system protein TraW;protein_id=WJG95200.1;transl_table=11 CP118133.1 Genbank gene 67261 67647 . - . ID=gene-PUW35_22975;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=PUW35_22975 CP118133.1 Protein Homology CDS 67261 67647 . - 0 ID=cds-WJG95201.1;Parent=gene-PUW35_22975;Dbxref=NCBI_GP:WJG95201.1;Name=WJG95201.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=PUW35_22975;product=type-F conjugative transfer system protein TrbI;protein_id=WJG95201.1;transl_table=11 CP118133.1 Genbank pseudogene 67622 70269 . - . ID=gene-PUW35_22980;Name=traC;gbkey=Gene;gene=traC;gene_biotype=pseudogene;locus_tag=PUW35_22980;pseudo=true CP118133.1 Protein Homology CDS 67622 70269 . - 0 ID=cds-PUW35_22980;Parent=gene-PUW35_22980;Note=frameshifted;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490573.1;locus_tag=PUW35_22980;product=type IV secretion system protein TraC;pseudo=true;transl_table=11 CP118133.1 Genbank gene 70285 70668 . - . ID=gene-PUW35_22985;Name=PUW35_22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22985 CP118133.1 Protein Homology CDS 70285 70668 . - 0 ID=cds-WJG95202.1;Parent=gene-PUW35_22985;Dbxref=NCBI_GP:WJG95202.1;Name=WJG95202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870327.1;locus_tag=PUW35_22985;product=hypothetical protein;protein_id=WJG95202.1;transl_table=11 CP118133.1 Genbank gene 70665 71132 . - . ID=gene-PUW35_22990;Name=PUW35_22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22990 CP118133.1 Protein Homology CDS 70665 71132 . - 0 ID=cds-WJG95203.1;Parent=gene-PUW35_22990;Dbxref=NCBI_GP:WJG95203.1;Name=WJG95203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490572.1;locus_tag=PUW35_22990;product=hypothetical protein;protein_id=WJG95203.1;transl_table=11 CP118133.1 Genbank pseudogene 71125 71345 . - . ID=gene-PUW35_22995;Name=traR;gbkey=Gene;gene=traR;gene_biotype=pseudogene;locus_tag=PUW35_22995;pseudo=true CP118133.1 Protein Homology CDS 71125 71345 . - 0 ID=cds-PUW35_22995;Parent=gene-PUW35_22995;Note=frameshifted;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=PUW35_22995;product=conjugal transfer protein TraR;pseudo=true;transl_table=11 CP118133.1 Genbank gene 71480 71995 . - . ID=gene-PUW35_23000;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=PUW35_23000 CP118133.1 Protein Homology CDS 71480 71995 . - 0 ID=cds-WJG95204.1;Parent=gene-PUW35_23000;Dbxref=NCBI_GP:WJG95204.1;Name=WJG95204.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490570.1;locus_tag=PUW35_23000;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WJG95204.1;transl_table=11 CP118133.1 Genbank gene 71992 72216 . - . ID=gene-PUW35_23005;Name=PUW35_23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23005 CP118133.1 Protein Homology CDS 71992 72216 . - 0 ID=cds-WJG95205.1;Parent=gene-PUW35_23005;Dbxref=NCBI_GP:WJG95205.1;Name=WJG95205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490569.1;locus_tag=PUW35_23005;product=DUF2689 domain-containing protein;protein_id=WJG95205.1;transl_table=11 CP118133.1 Genbank gene 72194 72790 . - . ID=gene-PUW35_23010;Name=PUW35_23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23010 CP118133.1 Protein Homology CDS 72194 72790 . - 0 ID=cds-WJG95206.1;Parent=gene-PUW35_23010;Dbxref=NCBI_GP:WJG95206.1;Name=WJG95206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490568.1;locus_tag=PUW35_23010;product=conjugal transfer protein TraP;protein_id=WJG95206.1;transl_table=11 CP118133.1 Genbank pseudogene 72780 74198 . - . ID=gene-PUW35_23015;Name=PUW35_23015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_23015;pseudo=true CP118133.1 Protein Homology CDS 72780 74198 . - 0 ID=cds-PUW35_23015;Parent=gene-PUW35_23015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490567.1;locus_tag=PUW35_23015;product=conjugal transfer protein TraB;pseudo=true;transl_table=11 CP118133.1 Genbank gene 74198 74938 . - . ID=gene-PUW35_23020;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=PUW35_23020 CP118133.1 Protein Homology CDS 74198 74938 . - 0 ID=cds-WJG95207.1;Parent=gene-PUW35_23020;Dbxref=NCBI_GP:WJG95207.1;Name=WJG95207.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=PUW35_23020;product=type-F conjugative transfer system secretin TraK;protein_id=WJG95207.1;transl_table=11 CP118133.1 Genbank gene 74925 75491 . - . ID=gene-PUW35_23025;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=PUW35_23025 CP118133.1 Protein Homology CDS 74925 75491 . - 0 ID=cds-WJG95208.1;Parent=gene-PUW35_23025;Dbxref=NCBI_GP:WJG95208.1;Name=WJG95208.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=PUW35_23025;product=type IV conjugative transfer system protein TraE;protein_id=WJG95208.1;transl_table=11 CP118133.1 Genbank gene 75513 75824 . - . ID=gene-PUW35_23030;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=PUW35_23030 CP118133.1 Protein Homology CDS 75513 75824 . - 0 ID=cds-WJG95209.1;Parent=gene-PUW35_23030;Dbxref=NCBI_GP:WJG95209.1;Name=WJG95209.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=PUW35_23030;product=type IV conjugative transfer system protein TraL;protein_id=WJG95209.1;transl_table=11 CP118133.1 Genbank gene 75839 76201 . - . ID=gene-PUW35_23035;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=PUW35_23035 CP118133.1 Protein Homology CDS 75839 76201 . - 0 ID=cds-WJG95210.1;Parent=gene-PUW35_23035;Dbxref=NCBI_GP:WJG95210.1;Name=WJG95210.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490563.1;locus_tag=PUW35_23035;product=type IV conjugative transfer system pilin TraA;protein_id=WJG95210.1;transl_table=11 CP118133.1 Genbank gene 76243 76644 . - . ID=gene-PUW35_23040;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=PUW35_23040 CP118133.1 Protein Homology CDS 76243 76644 . - 0 ID=cds-WJG95211.1;Parent=gene-PUW35_23040;Dbxref=NCBI_GP:WJG95211.1;Name=WJG95211.1;gbkey=CDS;gene=traY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672631.1;locus_tag=PUW35_23040;product=conjugal transfer relaxosome protein TraY;protein_id=WJG95211.1;transl_table=11 CP118133.1 Genbank gene 76737 77426 . - . ID=gene-PUW35_23045;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=PUW35_23045 CP118133.1 Protein Homology CDS 76737 77426 . - 0 ID=cds-WJG95212.1;Parent=gene-PUW35_23045;Dbxref=NCBI_GP:WJG95212.1;Name=WJG95212.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746563.1;locus_tag=PUW35_23045;product=conjugal transfer transcriptional regulator TraJ;protein_id=WJG95212.1;transl_table=11 CP118133.1 Genbank gene 77602 78000 . - . ID=gene-PUW35_23050;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=PUW35_23050 CP118133.1 Protein Homology CDS 77602 78000 . - 0 ID=cds-WJG95213.1;Parent=gene-PUW35_23050;Dbxref=NCBI_GP:WJG95213.1;Name=WJG95213.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151566.1;locus_tag=PUW35_23050;product=relaxosome protein TraM;protein_id=WJG95213.1;transl_table=11 CP118133.1 Genbank gene 78423 78893 . + . ID=gene-PUW35_23055;Name=PUW35_23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23055 CP118133.1 Protein Homology CDS 78423 78893 . + 0 ID=cds-WJG95270.1;Parent=gene-PUW35_23055;Dbxref=NCBI_GP:WJG95270.1;Name=WJG95270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490559.1;locus_tag=PUW35_23055;product=transglycosylase SLT domain-containing protein;protein_id=WJG95270.1;transl_table=11 CP118133.1 Genbank pseudogene 79203 80021 . - . ID=gene-PUW35_23060;Name=PUW35_23060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_23060;pseudo=true CP118133.1 Protein Homology CDS 79203 80021 . - 0 ID=cds-PUW35_23060;Parent=gene-PUW35_23060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=PUW35_23060;product=DUF932 domain-containing protein;pseudo=true;transl_table=11 CP118133.1 Genbank gene 80124 80282 . - . ID=gene-PUW35_23065;Name=PUW35_23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23065 CP118133.1 Protein Homology CDS 80124 80282 . - 0 ID=cds-WJG95214.1;Parent=gene-PUW35_23065;Dbxref=NCBI_GP:WJG95214.1;Name=WJG95214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001704449.1;locus_tag=PUW35_23065;product=hypothetical protein;protein_id=WJG95214.1;transl_table=11 CP118133.1 Genbank gene 80368 80496 . - . ID=gene-PUW35_23070;Name=PUW35_23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23070 CP118133.1 GeneMarkS-2+ CDS 80368 80496 . - 0 ID=cds-WJG95215.1;Parent=gene-PUW35_23070;Dbxref=NCBI_GP:WJG95215.1;Name=WJG95215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_23070;product=hypothetical protein;protein_id=WJG95215.1;transl_table=11 CP118133.1 Genbank pseudogene 80531 81187 . - . ID=gene-PUW35_23075;Name=PUW35_23075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_23075;pseudo=true CP118133.1 Protein Homology CDS 80531 81187 . - 0 ID=cds-PUW35_23075;Parent=gene-PUW35_23075;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490558.1;locus_tag=PUW35_23075;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 CP118133.1 Genbank pseudogene 81181 81315 . - . ID=gene-PUW35_23080;Name=PUW35_23080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_23080;pseudo=true CP118133.1 Protein Homology CDS 81181 81315 . - 0 ID=cds-PUW35_23080;Parent=gene-PUW35_23080;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490557.1;locus_tag=PUW35_23080;product=conjugation system SOS inhibitor PsiB family protein;pseudo=true;transl_table=11 CP118133.1 Genbank gene 81355 83352 . - . ID=gene-PUW35_23085;Name=PUW35_23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23085 CP118133.1 Protein Homology CDS 81355 83352 . - 0 ID=cds-WJG95216.1;Parent=gene-PUW35_23085;Dbxref=NCBI_GP:WJG95216.1;Name=WJG95216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490556.1;locus_tag=PUW35_23085;product=ParB/RepB/Spo0J family partition protein;protein_id=WJG95216.1;transl_table=11 CP118133.1 Genbank gene 83421 83663 . - . ID=gene-PUW35_23090;Name=PUW35_23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23090 CP118133.1 Protein Homology CDS 83421 83663 . - 0 ID=cds-WJG95217.1;Parent=gene-PUW35_23090;Dbxref=NCBI_GP:WJG95217.1;Name=WJG95217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490555.1;locus_tag=PUW35_23090;product=DUF905 domain-containing protein;protein_id=WJG95217.1;transl_table=11 CP118133.1 Genbank pseudogene 83718 84237 . - . ID=gene-PUW35_23095;Name=PUW35_23095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW35_23095;pseudo=true CP118133.1 Protein Homology CDS 83718 84237 . - 0 ID=cds-PUW35_23095;Parent=gene-PUW35_23095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490554.1;locus_tag=PUW35_23095;product=single-stranded DNA-binding protein SSB2;pseudo=true;transl_table=11 CP118133.1 Genbank gene 84831 85010 . - . ID=gene-PUW35_23100;Name=PUW35_23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23100 CP118133.1 GeneMarkS-2+ CDS 84831 85010 . - 0 ID=cds-WJG95218.1;Parent=gene-PUW35_23100;Dbxref=NCBI_GP:WJG95218.1;Name=WJG95218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW35_23100;product=hypothetical protein;protein_id=WJG95218.1;transl_table=11 CP118133.1 Genbank gene 84974 85297 . - . ID=gene-PUW35_23105;Name=PUW35_23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23105 CP118133.1 Protein Homology CDS 84974 85297 . - 0 ID=cds-WJG95219.1;Parent=gene-PUW35_23105;Dbxref=NCBI_GP:WJG95219.1;Name=WJG95219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490553.1;locus_tag=PUW35_23105;product=DNA polymerase III subunit theta;protein_id=WJG95219.1;transl_table=11 CP118133.1 Genbank gene 85533 85967 . - . ID=gene-PUW35_23110;Name=PUW35_23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23110 CP118133.1 Protein Homology CDS 85533 85967 . - 0 ID=cds-WJG95220.1;Parent=gene-PUW35_23110;Dbxref=NCBI_GP:WJG95220.1;Name=WJG95220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490552.1;locus_tag=PUW35_23110;product=DUF1380 family protein;protein_id=WJG95220.1;transl_table=11 CP118133.1 Genbank gene 86034 86468 . - . ID=gene-PUW35_23115;Name=PUW35_23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23115 CP118133.1 Protein Homology CDS 86034 86468 . - 0 ID=cds-WJG95221.1;Parent=gene-PUW35_23115;Dbxref=NCBI_GP:WJG95221.1;Name=WJG95221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490551.1;locus_tag=PUW35_23115;product=antirestriction protein;protein_id=WJG95221.1;transl_table=11 CP118133.1 Genbank gene 86964 87728 . - . ID=gene-PUW35_23120;Name=PUW35_23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23120 CP118133.1 Protein Homology CDS 86964 87728 . - 0 ID=cds-WJG95222.1;Parent=gene-PUW35_23120;Dbxref=NCBI_GP:WJG95222.1;Name=WJG95222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490550.1;locus_tag=PUW35_23120;product=hypothetical protein;protein_id=WJG95222.1;transl_table=11 CP118133.1 Genbank gene 87800 88213 . - . ID=gene-PUW35_23125;Name=PUW35_23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_23125 CP118133.1 Protein Homology CDS 87800 88213 . - 0 ID=cds-WJG95223.1;Parent=gene-PUW35_23125;Dbxref=NCBI_GP:WJG95223.1;Name=WJG95223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990115.1;locus_tag=PUW35_23125;product=DUF1380 family protein;protein_id=WJG95223.1;transl_table=11 CP118133.1 Genbank gene 88269 88490 . - . ID=gene-PUW35_22585;Name=PUW35_22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW35_22585 CP118133.1 Protein Homology CDS 88269 88490 . - 0 ID=cds-WJG95224.1;Parent=gene-PUW35_22585;Dbxref=NCBI_GP:WJG95224.1;Name=WJG95224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490549.1;locus_tag=PUW35_22585;product=hypothetical protein;protein_id=WJG95224.1;transl_table=11 ###